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UGA-Marine Sciences    Gordon and Betty Moore Foundation   National Science Foundation
 

Roseovarius nubinhibens ISM

©Dennis Kunkel Microscopy, Inc.

Ecology and Physiology

Roseovarius nubinhibens ISM was isolated from surface waters of the Caribbean Sea on seawater supplemented with peptone and Casamino acids (Furhman et al. 1994, González et al. 2003). Although isolated non-selectively, this organism was discovered to mediate organic sulfur transformations known to be important in the ocean. Like other Roseobacter relatives, R. nubinhibens can degrade the algal osmolyte dimethylsulfoniopropionate (DMSP) to dimethylsulfide (DMS), a gas that readily escapes from ocean surface waters to play a role in global climate regulation through cloud formation and backscatter of solar radiation (Simo 2001). This Roseobacter group member can also demethylate/demethiolate DMSP to methanethiol, the initial steps in a pathway the leads to methionine and other sulfur-containing biomolecules within the cell.

For NCBI Genome Page, click here.

 

 
General features of the Roseovarius nubinhibens ISM
Feature
Total number of coding sequences 3,547
G + C content (%) 63.0
Est. Genome size (bp) 3,668,667
% Coding 89.0
Sequence status Draft
Moore Foundation

Roseobacter Genomes

  Citreicella SE45 * Phaeobacter gallaeciensis 2.10 * Roseobacter sp. SK209-2-6
* Dinoroseobacter shibae DFL 12 * Phaeobacter sp. Y4I * Roseovarius nubinhibens ISM
* Jannaschia sp. CCS1   Rhodobacterales bacterium KLH11 * Roseovarius sp. TM1035
  Loktanella sp. SE62 * Rhodobacterales bacterium HTCC2083 * Roseovarius sp. 217
* Loktanella vestfoldensis SKA53   Rhodobacterales bacterium HTCC2150   Ruegeria lacuscaerulensis ITI-1157
* Maritimibacter alkaliphilus HTCC2654 * Rhodobacterales bacterium HTCC2255 * Ruegeria pomeroyi DSS-3
* Oceanibulbus indolifex HEL45 * Roseobacter denitrificans OCh 114 * Ruegeria sp. TM1040
* Oceanicola batsensis HTCC2597 * Roseobacter litoralis Och 149   Ruegeria sp. Trich CH4B
* Oceanicola granulosus HTCC2516 * Roseobacter sp. AzwK-3b * Ruegeria sp. R11
* Octadecabacter arcticus 238 * Roseobacter sp. CCS2 * Sagittula stellata E-37
* Octadecabacter antarcticus 307 * Roseobacter sp. GAI101 * Sulfitobacter sp. EE-36
* Pelagibaca bermudensis HTCC2601 * Roseobacter sp. MED193 * Sulfitobacter NAS-14.1
* Phaeobacter gallaeciensis BS107   Roseobacter sp. R2A57   Thalassiobium R2A62
 

Shalabh Sharma
Scientific Computing Professional Associate  [ssharmai@uga.edu]

Dr. Mary Ann Moran
Research Professor Department of Marine Sciences  [mmoran@uga.edu]

* Genomes available in GBrowse

University of Georgia
Department of Marine Sciences
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This material is based upon work supported by the National Science Foundation under Grant No. 0315200.

Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s)
and do not necessarily reflect the views of the National Science Foundation.