Annotation Tools
Blast GBrowse Short Sequence Search Precomputed Blast Results Download Files
   

Blast

Find regions of local similarity with Roseobacter sequences.

GBrowse

Access a web-based browser of Roseobacter genomes.

Short Sequence Search

Find short sequences in genes or intergenic regions in Roseobacter genomes.

Precomputed Blast Results

Search a database of pre-computed genome BLAST results.

Download Files

Download Roseobacter genomes and a Java-based genome browser.

 

 
UGA-Marine Sciences    Gordon and Betty Moore Foundation   National Science Foundation
 

Oceanibulbus indolifex HEL45

Ecology and Physiology

Oceanibulbus indolifex HEL-45 was isolated from seawater taken a depth of 10 meters from the North Sea. This is the type strain and will be used for comparative analysis.

For NCBI Genome Page, click here.

 

 
General features of the Oceanibulbus indolifex HEL45
Feature
Total number of coding sequences 4,153
G + C content (%) 59.0
Est. Genome size (bp) 4,105,524
% Coding 89.0
Sequence status Draft
Moore Foundation

Roseobacter Genomes

  Citreicella SE45 * Phaeobacter gallaeciensis 2.10 * Roseobacter sp. SK209-2-6
* Dinoroseobacter shibae DFL 12 * Phaeobacter sp. Y4I * Roseovarius nubinhibens ISM
* Jannaschia sp. CCS1   Rhodobacterales bacterium KLH11 * Roseovarius sp. TM1035
  Loktanella sp. SE62 * Rhodobacterales bacterium HTCC2083 * Roseovarius sp. 217
* Loktanella vestfoldensis SKA53   Rhodobacterales bacterium HTCC2150   Ruegeria lacuscaerulensis ITI-1157
* Maritimibacter alkaliphilus HTCC2654 * Rhodobacterales bacterium HTCC2255 * Ruegeria pomeroyi DSS-3
* Oceanibulbus indolifex HEL45 * Roseobacter denitrificans OCh 114 * Ruegeria sp. TM1040
* Oceanicola batsensis HTCC2597 * Roseobacter litoralis Och 149   Ruegeria sp. Trich CH4B
* Oceanicola granulosus HTCC2516 * Roseobacter sp. AzwK-3b * Ruegeria sp. R11
* Octadecabacter arcticus 238 * Roseobacter sp. CCS2 * Sagittula stellata E-37
* Octadecabacter antarcticus 307 * Roseobacter sp. GAI101 * Sulfitobacter sp. EE-36
* Pelagibaca bermudensis HTCC2601 * Roseobacter sp. MED193 * Sulfitobacter NAS-14.1
* Phaeobacter gallaeciensis BS107   Roseobacter sp. R2A57   Thalassiobium R2A62
 

Shalabh Sharma
Scientific Computing Professional Associate  [ssharmai@uga.edu]

Dr. Mary Ann Moran
Research Professor Department of Marine Sciences  [mmoran@uga.edu]

 * Genomes available in GBrowse

University of Georgia
Department of Marine Sciences
Contact Us

  
 
 

This material is based upon work supported by the National Science Foundation under Grant No. 0315200.

Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s)
and do not necessarily reflect the views of the National Science Foundation.