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Find regions of local similarity with Roseobacter sequences.

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Access a web-based browser of Roseobacter genomes.

Short Sequence Search

Find short sequences in genes or intergenic regions in Roseobacter genomes.

Precomputed Blast Results

Search a database of pre-computed genome BLAST results.

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Download Roseobacter genomes and a Java-based genome browser.

 

 
UGA-Marine Sciences    Gordon and Betty Moore Foundation   National Science Foundation
 

Roseovarius sp. TM1035

Ecology and Physiology

Roseovarius sp. TM1035. The Roseobacter clade of marine bacteria is often found associated with dinoflagellates, one of the major producers of dimethylsulfoniopropionate (DMSP). This strain was isolated from the dinoflagellate Pfiesteria piscicida and actively metabolizes the dinoflagellate secondary product dimethylsulfoniopropionate (DMSP).

For NCBI Genome Page, click here.

Moore Foundation

 
General features of the Roseovarius sp. TM1035
Feature
Total number of coding sequiences 4,102
G + C content (%) 60.0
Est. Genome size (bp) 4,209,812
% Coding 90.0
Sequence status Draft

Roseobacter Genomes

Dinoroseobacter shibae DFL 12 Roseobacter sp. AzwK-3b Roseovarius nubinhibens ISM
Jannaschia sp. CCS1 Roseobacter denitrificans OCh 114 Roseovarius TM1035
Loktanella vestfoldensis SKA53 Roseobacter sp. CCS2 Sagittula stellata E-37
Oceanicola batsensis HTCC2597 Roseobacter sp. MED193 Silicibacter pomeroyi DSS-3
Oceanicola granulosus HTCC2516 Roseobacter RCA clade HTCC2150 Silicibacter sp. TM1040
Rhodobacterales bacterium HTCC2255 Roseobacter SK209-2-6 Sulfitobacter sp. EE-36
Rhodobacterales bacterium HTCC2654 Roseovarius sp. 217 Sulfitobacter NAS-14.1
  Roseovarius sp. HTCC2601  
 

Shulei Sun
Scientific Computing Professional Associate  [shulei@uga.edu]

Dr. Mary Ann Moran
Research Professor Department of Marine Sciences  [mmoran@uga.edu]

University of Georgia
Department of Marine Sciences
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This material is based upon work supported by the National Science Foundation under Grant No. 0315200.

Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s)
and do not necessarily reflect the views of the National Science Foundation.