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Find regions of local similarity with Roseobacter sequences.

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Access a web-based browser of Roseobacter genomes.

Short Sequence Search

Find short sequences in genes or intergenic regions in Roseobacter genomes.

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Search a database of pre-computed genome BLAST results.

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UGA-Marine Sciences    Gordon and Betty Moore Foundation   National Science Foundation
 

Loktanella vestfoldensis SKA53

Ecology and Physiology

Loktanella vestfoldensis SKA53 was isolated from surface seawater from the north Atlantic Ocean. Members of this genus have also been isolated from marine biofilms and Antarctic lake microbial mats.

For NCBI Genome Page, click here.

Moore Foundation

 
General features of the Loktanella vestfoldensis SKA53
Feature
Total number of coding sequiences 4,166
G + C content (%) 65.0
Est. Genome size (bp) 4,327,529
% Coding 90
Sequence status Draft

Roseobacter Genomes

Dinoroseobacter shibae DFL 12 Roseobacter sp. AzwK-3b Roseovarius nubinhibens ISM
Jannaschia sp. CCS1 Roseobacter denitrificans OCh 114 Roseovarius TM1035
Loktanella vestfoldensis SKA53 Roseobacter sp. CCS2 Sagittula stellata E-37
Oceanicola batsensis HTCC2597 Roseobacter sp. MED193 Silicibacter pomeroyi DSS-3
Oceanicola granulosus HTCC2516 Roseobacter RCA clade HTCC2150 Silicibacter sp. TM1040
Rhodobacterales bacterium HTCC2255 Roseobacter SK209-2-6 Sulfitobacter sp. EE-36
Rhodobacterales bacterium HTCC2654 Roseovarius sp. 217 Sulfitobacter NAS-14.1
  Roseovarius sp. HTCC2601  
 

Shulei Sun
Scientific Computing Professional Associate  [shulei@uga.edu]

Dr. Mary Ann Moran
Research Professor Department of Marine Sciences  [mmoran@uga.edu]

University of Georgia
Department of Marine Sciences
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This material is based upon work supported by the National Science Foundation under Grant No. 0315200.

Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s)
and do not necessarily reflect the views of the National Science Foundation.