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Find regions of local similarity with Roseobacter sequences.

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Access a web-based browser of Roseobacter genomes.

Short Sequence Search

Find short sequences in genes or intergenic regions in Roseobacter genomes.

Precomputed Blast Results

Search a database of pre-computed genome BLAST results.

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Download Roseobacter genomes and a Java-based genome browser.

 

 
UGA-Marine Sciences    Gordon and Betty Moore Foundation   National Science Foundation
 

Hoeflea phototrophica DFL-43

Ecology and Physiology

Hoeflea phototrophica DFL-43 (DSM 17068) was isolated from the toxic dinoflagellate Prorocentrum lima. This organism contains bacteriochlorophyll a and genes for the photosynthesis reaction center. Hoeflea phototrophica DFL-43 is the type strain will be used for comparative analysis.

For NCBI Genome Page, click here.

Moore Foundation

 
General features of theHoeflea phototrophica DFL-43
Feature
Total number of coding sequiences 4,357
G + C content (%) 59.0
Est. Genome size (bp) 4,458,057
% Coding 89.0
Sequence status Draft

Roseobacter Genomes

Dinoroseobacter shibae DFL 12 Roseobacter sp. AzwK-3b Roseovarius nubinhibens ISM
Jannaschia sp. CCS1 Roseobacter denitrificans OCh 114 Roseovarius TM1035
Loktanella vestfoldensis SKA53 Roseobacter sp. CCS2 Sagittula stellata E-37
Oceanicola batsensis HTCC2597 Roseobacter sp. MED193 Silicibacter pomeroyi DSS-3
Oceanicola granulosus HTCC2516 Roseobacter RCA clade HTCC2150 Silicibacter sp. TM1040
Rhodobacterales bacterium HTCC2255 Roseobacter SK209-2-6 Sulfitobacter sp. EE-36
Rhodobacterales bacterium HTCC2654 Roseovarius sp. 217 Sulfitobacter NAS-14.1
  Roseovarius sp. HTCC2601  
 

Shulei Sun
Scientific Computing Professional Associate  [shulei@uga.edu]

Dr. Mary Ann Moran
Research Professor Department of Marine Sciences  [mmoran@uga.edu]

University of Georgia
Department of Marine Sciences
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This material is based upon work supported by the National Science Foundation under Grant No. 0315200.

Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s)
and do not necessarily reflect the views of the National Science Foundation.