LOCUS RSK20926 4563282 bp DNA linear CON 07-JUN-2006 DEFINITION Roseobacter sp. SK209-2-6. ACCESSION RSK20926 VERSION RSK20926.1 KEYWORDS . SOURCE Roseobacter sp. SK209-2-6 ORGANISM Roseobacter sp. SK209-2-6 Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter. REFERENCE 1 (bases 1 to 4563282) AUTHORS Ward,B., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M. and Venter,J.C. TITLE Direct Submission JOURNAL Submitted (06-JUN-2006) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..4563282 /organism="Roseobacter sp. SK209-2-6" /mol_type="genomic DNA" /strain="SK209-2-6" /db_xref="taxon:388739" gene <1..411 /locus_tag="RSK20926_00005" CDS <1..411 /locus_tag="RSK20926_00005" /note="COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)" /codon_start=1 /transl_table=11 /product="alpha-D-glucose-1-phosphate cytidylyltransferase" /protein_id="jcventer:1101232001801_RSK20926_00005" /db_xref="CDD:31401" /translation="TFCLTYGDGVSDVDLTRLIEFHHSEGRQATVTAVQPSGRFGSIE IEGNGASGFVEKPAGDNHWVSGGFFVCEPPVLDHIEGPDTIWEKKPMQQLAEDGQLSV YKHRGFWSAMDTLRDKNQLEALWSGGGAPWKTWG" gene 415..969 /locus_tag="RSK20926_00010" CDS 415..969 /locus_tag="RSK20926_00010" /note="COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes" /codon_start=1 /transl_table=11 /product="CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase" /protein_id="jcventer:1101232001801_RSK20926_00010" /db_xref="CDD:40985" /translation="MSGPSLTALPLPGVFHYQPQLHEDNRGSFGRLSCAKMLDEAGLN STWVQSNLSRTATRGTLRGMHYQTPPFAEVKLLTCLSGQVYDVLVDLRPSSPSYLQWT SIVLEGARADTLYIPAGIAHGFQSLSDDVTLHYSHSQPFSPAYQAGISYRDPQIAIQW ELPVTLLSERDAALPFLSDIKEAS" gene 969..2252 /locus_tag="RSK20926_00015" CDS 969..2252 /locus_tag="RSK20926_00015" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="methyltransferase" /protein_id="jcventer:1101232001801_RSK20926_00015" /translation="MQCRHCATPLSHNILDLAHAPPSNAYLEAEQRLQPEVHFPLRLF FCPSCTLVQTEDFCRADDLFDANYVYFSSTSSSWCAHAARSAESAIKRFDLDENSFVV EVASNDGYLLKNFVEAGIPCLGFEPTASTAEVARGKGVESRLEFFSEASARALRQERA TQGKGQAGGADLIAGNNVYAHVPDINDFTRGLYQLLAPEGVISLEFPHLLELVRHGQF DTVYHEHFSYLSLTAVAKIFAAAGLRLFDVEVLPTHGGSLRIWGCRAEAAHRTEPAVR AILDEEAQAGITRPEFYHNLQHQADHAAEHLLAFLIECKSRGETVAAYGAAAKGTTLL NYARINPRLLPFVCDAAPFKQGRYLPGSHIPVRPVEALRETPPDHLLILPWNIKEEIA ASLAWLAQDHGTAFWTVMPEPTRLEQPAFTQARSA" gene 2285..3499 /locus_tag="RSK20926_00020" CDS 2285..3499 /locus_tag="RSK20926_00020" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001801_RSK20926_00020" /db_xref="CDD:40622" /translation="MSAPKLSICIPTYNRAQYLGTLLVHLLEVVAQLPFETEIIVSDN ASEDNTLELLEAAQDVLPLTILRQESNLGAVPNIHATMCAAKGTYVVYLADDDRLLPE AIPAAIAMLEANPKASGLYAPWQTRDLVTGKVGGQFYRQPCDVTIARGNYAQLLEHIA EYNIYSEICILRREVFKALHPIATDIAFWAFTTPAEYLGVGDLIYAQEPFYNSISRHF EGDTRSQLGYSEVMSAWDTYRGGLEILHGLAKAHGGLKHPDKVARFVHGHPIERMYTA LRMRLQMGGDPLENYALAARLRGLGLEDKLPVPMEQIRSTAALYFACVKLPETLRAEG IAVIGDCPETVLQQLDTITPLPVRGTAEVADIGKSDVVLDFACQEAALLEAAQTCALA HLTETQLQQKFA" gene 3501..4406 /locus_tag="RSK20926_00025" CDS 3501..4406 /locus_tag="RSK20926_00025" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="CDP-4-dehydro-6-deoxy-D-gulose 4-reductase" /protein_id="jcventer:1101232001801_RSK20926_00025" /db_xref="CDD:30800" /translation="MEDDLERDPGGVAAMTRILLTGSTGFVGRAVTRELRRGGHELCH VIRQGSAARLPAAGTTERGQSPEQIIEVDDLFALPATWWAETAQGYDLVLHMAWYAEP GKYQTSLKNLQCIAGTMALAEGLQQAGVPRFVGLGTCLEYDLSGGRVTPDTPLDPQSP YAAAKAACAIALQAMLPPAGVSFLWARLFYLHGEGEDPRRLVAALHAHLAEGRALELS QGSQIRDFLDVDAAAALLVQDALSDRSGTTNICSGRGTSVRALAESIADRYGRRDLLL FGARPDNPDDPPCVIGQRSNTPLPA" gene 4453..5229 /locus_tag="RSK20926_00030" CDS 4453..5229 /locus_tag="RSK20926_00030" /note="COG3510 Cephalosporin hydroxylase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001801_RSK20926_00030" /db_xref="CDD:33313" /translation="MTHFKTEIAARTQDMGANAALQKASLDFLRSSAKAQYSYNFHWM DRPIIQYPQDIVAMQELIYDLRPDLIIETGIAHGGSLIFSASVLAMLDMVEAIEAGES FDPNVSKRKVLGIDIDIRDHNRVAIDAHPMRSRIEMIQGSSVDMDVIQQVHDFASGYK KVLVCLDSNHTHEHVLEELRAYAPLASVGSYCVVFDTLIEDMEEDTYTDRPWGKGNNP YTAIQAYLQESGNFEIDSQIHERLLITVAQNGFLRRTSGN" gene complement(5374..6735) /locus_tag="RSK20926_00035" CDS complement(5374..6735) /locus_tag="RSK20926_00035" /note="COG1109 Phosphomannomutase" /codon_start=1 /transl_table=11 /product="phosphoglucosamine mutase" /protein_id="jcventer:1101232001801_RSK20926_00035" /db_xref="CDD:31306" /translation="MRKFFGTDGVRGTANIHPMTAEMALRIGAAVGRYFRREAGGVHR VVIGKDTRLSGYMFENALTAGLTSTGMNVLLLGPVPTPAVGLMTRSMRADLGVMISAS HNPAQDNGIKFFGPDGFKLSDQAELEIEALIENGVAPAQPQNIGRAKRIDDARFRYGE RVKSSLPRGIRLDGLKVVLDCANGAAHRIAPEVLWELGADVVPLGIAPDGVNINHDCG STKPEAAAATVVAHRADVGICLDGDADRVILIDENGQVADGDQLMALLAGRWAKADLL AQNTLVATVMSNLGLERCLEAQGLKLARTAVGDRYVVEEMRAKGYNLGGEQSGHIVMS DHATTGDGLMAGLHMLAAMVETGEKASQLLNQFTPVPQLLKNTRFERGQTPLEDAAVQ QAISAAEQALNGQGRLLIRKSGTEPLIRVMAECEDAVLLEQTVDQVVAAVEAATKKNP APA" gene 7013..8422 /locus_tag="RSK20926_00040" CDS 7013..8422 /locus_tag="RSK20926_00040" /note="COG3210 Large exoproteins involved in heme utilization or adhesion" /codon_start=1 /transl_table=11 /product="ribonuclease III" /protein_id="jcventer:1101232001801_RSK20926_00040" /translation="MSEQTPALSLPLLMPSQAQKHVTHNEALMLLDMVVQLTVEGHQE SDPPSEPSLGARYILGAAPTGDWAGHAGEIALWDGYLWRFLLPRPGWRADITATGQSL RYSGSAWEAVLPELQNLPHLGIATAADNTNRLAVSARATLLTHAGAGHQLKLNKSAPG DTASLLFQTGWEGRAEMGTGGSDDFSIKVSADGSSWQEALHIDRSTGQVSLPQGSPNL RERLNAPRSYYVRSDGSDSNSGQSDSAAGAFLTLQHAVDLALTLDNGPHEVRIEVGPG SYGEDLQIAGGLPGSGALRITGDVANPAMVSLSRISCSAGARVALAGLELSGADALLA ESGAWVALADLRFTGSGAGITATSAELACAGADLYLGSGLSALAQLRGHARLLAAGGT FTLGTGITWGGAQAGGLDLSGFCHADLTGVSFAGDTAGCTGPRYALAQNAILDSGGAG ASFVPGSQNGITSSGGQFL" gene 8468..8725 /locus_tag="RSK20926_00045" CDS 8468..8725 /locus_tag="RSK20926_00045" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001801_RSK20926_00045" /translation="MPEAQLRHIFLRALQSGWSGGNRVFRPLSSARSQVFALFRSRLR PWGTVAPYFVDFPHLAFSGVPQAVKDPPCFPFLEPHFWSIL" gene 9153..10658 /locus_tag="RSK20926_00050" CDS 9153..10658 /locus_tag="RSK20926_00050" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001801_RSK20926_00050" /translation="MSAAGFAMSIALSVAATSAWAVTEVNTLTPGEITQQQIAAFSGQ HPYVWTPSTSFRSPGSDEAEPLPGGRDGSAAAGFLTAEQQNAGFSWDPVLGLVVLKGL LGIEGHVLATDAPGNILAGFREGEAGRRAFIWNSVTGMQDLNDVAEVPAGVTLTEVQD ISASGALIGHALSAEGASQIFYWVPGAPVQILALVNDETPENVQAVSQAGHLIGQASG DQGYIWSREATRLLTSPDGAATEALGVNVAGDVVGAGSGAQEGDAPRALLWPADGSDA IDLNSRLSAPLELGVQLIRAEAINEGGEIAAYGLTSSGAVHLFMLRPDPTGPEGEQSY SPQDLGEIYLEADKQPLSGLGLSDEGDIFGACAPLAQACPAIRTLSAQELARLYDVTN RVDGVTNFFAPGGLGGPQALTSSLAPLGGLGGGAVGGGAAGGGAAGGGTPTGGGTTSP TPSSPFFPSVGVTTPTAEGGTPVAPVPVPAAIWALLMGLALLLPAGLRRRA" gene complement(10834..11673) /locus_tag="RSK20926_00055" CDS complement(10834..11673) /locus_tag="RSK20926_00055" /note="COG0489 ATPases involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="ATPases involved in chromosome partitioning-like protein" /protein_id="jcventer:1101232001801_RSK20926_00055" /db_xref="CDD:30835" /translation="MERLQAAITKAREKQKGMAPQSASRQNSGPAPQSEASALWQALP EVTFNPRTLTQNRIVSMEASAEATPFDMLRTRTMRIMQEQGWKRLAVTSPTPSCGKST IALNLAFSMARQPNTSAIQIEADMRQPSQNRLLGLSRQDRRSGSSVADLLSGQTQFSE AAIRRGNDLAFVTNEAPVRNASDILLGEGVGDVLAQIEADYQPHAMIFDMPPVLVNDD TMAFMQHVDCVLIIAAAERSTIAEIDRCERDLASQTNVLGVVLNKCHFTPSEYGSYGK YGY" gene complement(11692..13284) /locus_tag="RSK20926_00060" CDS complement(11692..13284) /locus_tag="RSK20926_00060" /note="COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis" /codon_start=1 /transl_table=11 /product="lipopolysaccharide biosynthesis" /protein_id="jcventer:1101232001801_RSK20926_00060" /db_xref="CDD:33019" /translation="MEFEYYWRIFRRHLPSIVILTAIGAALGLAIALGLPPVYRSQAT LIVESEQIPGELAASTVSTGEIEALQIIRQRILSREILLELANDLQLYADKPDMIADD KVADLRDRVEITTVGGQVRRGERSATIVTVAFEAPNSSQSAQTTNEVVTLILQENVRM RTSVARQTLDFFTQETERLEQSLSRISSQILNFQENNLEALPDSLEFRRSQQSALQER LTQLEREKSALQDRKGQLVTLFEATGQTSLTDRRAIARAVSAQARPEERQLAELKREY ARLSATLSENNPRMTLLKSQIAAAEAAVAALPTLAPAPSEDAGRNLELSLFDIQIADI EAQIGYIDNQYVAAETRMKAISRTIEATPGNAVTLASMERDYANLQEQYNQAVANKAR AETGSMIESLSRGQRITVIEQAVPPEQPTSPNRPVIAIGGLMGGLSFGAFLLLIREFL NKSIRRPRDLENGLQITTFATIPYMTTQAETLRRRSVVLGVGLTLIIGVPVILWYVDQ QVAPLQPIFERVLDKAGLGQFL" gene complement(13297..14199) /locus_tag="RSK20926_00065" CDS complement(13297..14199) /locus_tag="RSK20926_00065" /note="COG3267 Type II secretory pathway, component ExeA (predicted ATPase)" /codon_start=1 /transl_table=11 /product="ATPase" /protein_id="jcventer:1101232001801_RSK20926_00065" /db_xref="CDD:33078" /translation="MNFNLNIYLDHFGLNRRPFTLVPDPDFMFWSRAHKKAKAILEYG LISRSPITLVTGEVGSGKTTLLRDLLQNIGDELLIGLISNATATDRSDLMRLILGALG EEIREEDSYATLNRRLEELLVEEYSKGRRVVLIFDEAQNLGQESLENLRMLTNINFAD HELVQLVLVGQPELRDIIMRSDMTQLAQRISASVFLPRLTDVDVETYITHRLNIAGAQ HQIFLPETFAKIRQATGGIPRLINQLCDFALLYAFELGVQTVDETAIQEVLDDNLFFC AGRGNPLRLVQAEQAPRLDSDEMK" gene 14428..16923 /locus_tag="RSK20926_00070" CDS 14428..16923 /locus_tag="RSK20926_00070" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="Tetratricopeptide TPR_2" /protein_id="jcventer:1101232001801_RSK20926_00070" /db_xref="CDD:34615" /translation="MISIGFHDKRRDALIFARIILMFKLKNLLIVMLMMGVLTACKSR EERAEEYYQSALALLEEGDTDRALVELRNVFDNNGLHREARQLYADLVLARGDAQEAY GQYLRLVEQYPDAVEVRLQLAELALDLGNWEEVKRHGGAAIELAPEVPAHQALEIFIR YQEARQRQDDVAAGEVVREAETLLETHPDLSTALRILVEWHATSPEPARALPYLDQLL AQFPNARSLLMARLGILQQAGMSEEIGTQLHQIYDRFPEDPVIVDLMIKWYQSRGDFE TLEAFLRERAGPVEENFEGHMAVVALLAQTQGQEAALAELVQLAKANEASDLGRQYLL QQMQLRFQAGEHEASMAEVTEIVAQGKDPDLVNEARMLLSRMKAATGDQEEARRLVAA VLESDASNVPALSAQAAWHIREDKLSEAITGLRHALDQEPRNANTLLLLAEAQQKMGN VELAEQRLAQAVEITNGAPREALVYARFQIARGQLAAADRVLTDSFSANGNLEVARLL GQVLLRRGDFEGAQGILETLANSQNPNAAPLARSMQAALLFNQNRLEEGFAFLRSSVE EGDADSEFITSLQILRVQMMTGRLDDARNQIAAMHVQFPDNLALRMLEGNLYALEGKQ DEAIKIYRALHAENPDQPVVLQRLYASLREIGRGEEASGFLAAALERQPDLPPLLMLR AVELEEQLKSEEAIAIYEKLYAADPGSLITANNLASMLATHRKSEEDLKRAYTIAQRL NGTTIPAMLDTLGWVQYLNEETDAAILNLQAATRGLPGNPTVAFNLAHAFAQAGRTEE ALAELQRGFDLAGDDETVPQLARARELLEKLGG" gene 17093..17707 /locus_tag="RSK20926_00075" CDS 17093..17707 /locus_tag="RSK20926_00075" /note="COG1596 Periplasmic protein involved in polysaccharide export" /codon_start=1 /transl_table=11 /product="polysaccharide export protein" /protein_id="jcventer:1101232001801_RSK20926_00075" /db_xref="CDD:42534" /translation="MKVTTIITTIITRTWVAMICGLLLAATAEASDYRIKAGDTLRVE VLEDATINRDVLVGPDGSISVPLVGTIAVGGKTRGQASDSLAAALAPNFAKRPNVLVS LQAQRRATGGTVSRKVYVIGEVNNPGYVDVSRNTTLLQALALAGGVTDFAAVKRIQLR RVTDAGETVYRFNYRQVLDGVSNVGTSAVFGGDVIVVPTRRLFE" gene 17720..18973 /locus_tag="RSK20926_00080" CDS 17720..18973 /locus_tag="RSK20926_00080" /note="COG1629 Outer membrane receptor proteins, mostly Fe transport" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001801_RSK20926_00080" /translation="MRYLGTSLTLVAGLAALPAGSQETGGIIARFEFLQRVESVSNQD LNPGQTGTETISTSNFAYTLESKTRQSDLSLRLHTALRAPLAGSNDDTDFDNSGAILR YTHRAPGARISVYGLLNHRELAHLRSFDLVDENTIIDDTDDLGGTGTRTNARLRLDAQ FRENRRFGWGLSFGTAALRYKNLSAGSTLRDVDSYNAALNTRFDLSPEVQLTSRFSYS QSEEEGSARSSTRGADFGISVQRPIGELRSALSFAWPNQSADRVSWTVGAARDLKQGG RVSFDIGGSFADGRDTAVVGRFDYLHQLSKVSQISVNLNRLVSDNSDGSVVLRTTGRL GYGLALSDLTSLNFDVNYLDRDTLNSTDELTEYGVSLSVSHQLTREWNLNVGVSRTER DEFGSARATSDAVFFSLQRAWDAKF" gene 19025..20626 /locus_tag="RSK20926_00085" CDS 19025..20626 /locus_tag="RSK20926_00085" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001801_RSK20926_00085" /translation="MSVGQSFPAPSFSSGQGLRSGGLILAALVLASLPIFWLALESLA EVWVTPEYSHGPLIPLISLYLFLRELRDKEPLPLGTPVDRRPGLLVIIAALALAVVGN ATSVPDVVSYALIIWVGGVVLACFGWAEGRRHQMPVLHLIFMLPLPQILYWKLTIFLQ GVSSELGVWFIKLVEVPVYLDGNIIDLGPYKLQVAEACSGLRYLFPILSFSYLMAILY RGPYWHKVFLFLLAAPLTVFMNAFRIGVIGILVNSYGIEQADGFLHFFEGWVIFGACV GLLFITALLLQQLTHAPKSLSEAIDLDFQGLGPQMAKILQLPASRTLGLALLVTAAGS AAFVLAPRPEPQVPPRDSFGLFPSRMGEWSGYFATLDSEVEEVLGATDYINSVYTSQE QAAPVEFFAAWYHSQTEGEGIHSPEVCLPNGGWEIYSLDQHEISMPGTIYGTFTVNRA VIEKGLRRQLVYYWFEQRGVRMTNDVAAKFSVLRDTLIRGRSDGAMVRFVTRINEGES EADATRRLEALMAEALEPLPRYIPE" gene 21012..21488 /locus_tag="RSK20926_00090" CDS 21012..21488 /locus_tag="RSK20926_00090" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001801_RSK20926_00090" /translation="MIKKLKYAAAAAFAAIAPGAASALTFSGGPGTLSDGDTFLFTTS PADVGAIAFAPEGAGSITINILNDVGSNLRLAFDLVGNTLHGAVFTLDGTVFNPVVGT EFGAAISGLSTLVITYTGADAFDSIAFELAAVPLPAAAAMMLTALGGLALAKFRKS" gene complement(21735..>23669) /locus_tag="RSK20926_00095" CDS complement(21735..>23669) /locus_tag="RSK20926_00095" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="Neutral zinc metallopeptidase" /protein_id="jcventer:1101232001801_RSK20926_00095" /db_xref="CDD:29260" /translation="GLDSAMSFNATSTGTYYVAAGGYSDARSGTYSMAVTSSGSTPPT PGGSGASLDDLANFLTHGYWGGSSRSFNTSGSNQITVNISGLTAAGQQLARWAFEAWE AVANIDFVETLGSAQITFDDNDSGAYASSSTSGTTILSSEVNVSTAWLANSGTTIDSY SFSTYVHEIGHALGLGHQGDYNGNATYGVDETFSNDSWQVSIMSYFDQSENTTTNASR AALISTMMSDIVAIQNLYGAPGTSSATAGNTTWGANTTLSGYMADAMNALASSRNSSV NGNSVAFTIYDVDGYDILDLSYNSTNDRVDLNGEAFSDVSGLIGNLGIARGTLIEEFR AGSGNDTIVGNDAANRIYGNGGTDTIEGGTGYDTLYGGSGNDSLFGGSGRDSLRGDIG NDSLTGGTGDDTLYGGDGDDRLFGNTSLDTLYGGAGNDYISAGDGVDFVNGDAGNDTI HGRSGWDLLNGNDGNDSIYGSQGDDTLNGGGDDDWLSGGSAWDVLFGNDGNDTLYGNF GSDVQSGGAGNDQLFGGTGDDSLRGGDGNDTLQGNQGVDRLDGGAGDDLLRGGTLRDT FVFNTGYDNDEINDFEEHRDFLLLSTSLTGGETSAANILSTYGSVVNGQVVFDFGNGD VLTLSNLSTLSGLEDNINTF" gene complement(23794..23867) /locus_tag="RSK20926_t00141" tRNA complement(23794..23867) /locus_tag="RSK20926_t00141" /product="tRNA-Met" gene complement(27282..27395) /locus_tag="RSK20926_00100" CDS complement(27282..27395) /locus_tag="RSK20926_00100" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001803_RSK20926_00100" /translation="MIYDHALFFFALMTDIMGTPKEERESMLSETEIAIRL" gene complement(27666..27739) /locus_tag="RSK20926_t00139" tRNA complement(27666..27739) /locus_tag="RSK20926_t00139" /product="tRNA-Ile" gene complement(27767..27839) /locus_tag="RSK20926_t00137" tRNA complement(27767..27839) /locus_tag="RSK20926_t00137" /product="tRNA-Ala" gene complement(29971..30057) /locus_tag="RSK20926_00105" CDS complement(29971..30057) /locus_tag="RSK20926_00105" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001803_RSK20926_00105" /translation="MYLFCFHIFFAESSDFFVFWVAGLGGYT" gene complement(30233..32218) /locus_tag="RSK20926_00110" CDS complement(30233..32218) /locus_tag="RSK20926_00110" /note="COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family" /codon_start=1 /transl_table=11 /product="oxidoreductase, FMN-binding/pyridine nucleotide-disulfide oxidoreductase" /protein_id="jcventer:1101232001803_RSK20926_00110" /db_xref="CDD:32086" /translation="MQPYPHLFKPQPLRHKTLRNRAVFGAHTTNMAQGGLPGAAHAAY YLERALGGAAMIVVEPMPVHPAAVLTRGNFLHSTDEVIPHFRRMVEPCQEAGAVMIQQ LYHVGAHGDQDNSWHAAWSPSGGPSYHDSDGSHAMSEAEIEETIEGFVQAAIRCQKAG FDGVEVWAAYHCLLDQFWTPFSNTRDDKWGGSLENRTRFSREILQRIRQACGEDFIIG LAVNDEPGVEVALSRESMGEIVALHDRQELMDYVTVGSGSYFDFTRLIPSFQEAEMLG VDLAQSLKGAVKHALVTAESHIRTPENANTVLGAGQADLVSIVRGQIADPHLLSKAAA GRSDDIRGCLSCNQQCWGRRGRDYWISCLINPSVGREAEWGGDRFEKAPVSKSVLVVG GGPAGLEAARVAAERGHRVILAEAGNELGGQFRLAGLQPRRAQILDLIAWYERQLGRL GVEIRYSSYLDAEEIAAIGADEVVLATGSLPPETGFQKALPHQETLPGLEQGRVWSAE DAMAGRAQLAKQLVLLDEGGNWRGCGTAWHLAEAGHEVTIVTPDALVGKELQRSATDF PLRRRLAELGVHFVTDSAIAAWDPKRGAEVLSLLTGTKAWVPVGDLVLATVNISDMSL RDDLQALGLAPQLIGDANAPRMAVQAIYDGRAMGRGL" gene complement(32221..32949) /locus_tag="RSK20926_00115" CDS complement(32221..32949) /locus_tag="RSK20926_00115" /note="COG0345 Pyrroline-5-carboxylate reductase" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase, putative" /protein_id="jcventer:1101232001803_RSK20926_00115" /db_xref="CDD:30693" /translation="MRLGFIGTGVIASAVVRGLAGQGHEIRVSARSKARSSQLEAEIP EVQVTGLQEILDQSEVVFLGVMAEAAEAILTDLHFRLDQKVVSFMAGASLDRVSTLVA PAKAAAVMMPFPGIAQGGSAIMALGDEALLNQIFGTRNTVFTLETAAELEAYLCAQAV LSPVARLTADAAEWLGKRVADPAKGEAFLRLLISSNLAVSNSDDLIEALNTPGGFNQR LRLYMEKAGIGEDLARGLDRLEEG" gene complement(32951..34996) /locus_tag="RSK20926_00120" CDS complement(32951..34996) /locus_tag="RSK20926_00120" /note="COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family" /codon_start=1 /transl_table=11 /product="N-methylproline demethylase, putative" /protein_id="jcventer:1101232001803_RSK20926_00120" /db_xref="CDD:32086" /translation="MSNDPLLQPFQLKHLTLRNRIMTTSHEPAYPEEGMPKERYAAYH AERAKAGVALTMTAGSAAVSRNSPPVFNNILAYKDEVVPWIRNMTDQVHEHGAAIMIQ LTHLGRRTHWNKGDWLPAISATRHREPAHHAFPKLAEDWDIARVISDFADAAERMKEG GMDGVEIMTHGHLLDQFISPLTNDLDGPYGREHLESRMRLTTDIIAAVRARVGDEFVL GVRFAPDEVQEGGITPEMGLDIARILEGTGQVDFLNINRGRIHTDPAMTDMIPVQGMR GAPHLHSAGEVQKAINLPVFHGSKIPDVATARHAVSAGLVDMVGMTRAHMADPHVVRK ILEGREDDIRPCVGATYCLDRIYQAGEALCIHNPATGRELSMPHEISPAETRKEVAII GAGPAGLEAARVAAERGHDVIVFEAQPDPGGQIRLTVQNPRRAEMISIVDWRMAQCAA RDVEFRFNTWAEAADVTALNPDVVIVATGGMPNTMLHETRDEAANVVTSWDIISGDVK PGSNVLIYDESGDHPGVMAAEVAANAGAKVEVMTPDRTFAPDIMAMNLVPYMRALQDK DVTFTVTRRLLSVAPDGNQLTATIGTDYSSHTSKAQYDQVVVNYGTLPLDELYFDLKE LSSNRGEVDQSALIEGHPQTIASNPEGKFQLFRIGDAVSARNTHAAIYDALRLVKDI" gene complement(35094..36656) /locus_tag="RSK20926_00125" CDS complement(35094..36656) /locus_tag="RSK20926_00125" /note="COG5598 Trimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase family protein" /protein_id="jcventer:1101232001803_RSK20926_00125" /db_xref="CDD:46144" /translation="MSEVQVKSRGRRSRRGEGRSAEPGQNTHLKVPFITRQIPTYELL SEESLDQIEATAERIMAEIGIEFREDAEVVELFRAAGARVTELTHESWNLKFEPGMIR QILSTAPERFTQHARNPANTVEIGGDAMVLAPSYGSPFVMDLDKGRRYGTIEDFENFV KLAQMSPNLHHSGGTICEPTDIAVNKRHLDMVYAHMRYSDRAFLGSITAPERAEDSIE MCRILFGAEFVDQNCVIMGNFNTTSPLTMDGVTTKGIRAYAEAGQGSIHLPFLLGGAV SPLTIAGSVAQCLAESMVSCAITQMVRPGSPAVLASFISSMSLRSGSPTFGTPEPALG SLAMGQLARRLKLPLRCAGNFSTSKLPDAQAMQQSMMSMMSAVQCGANYILHSAGFLD GLLSMSYEKFMLDTDLCGALHAYLKGFEVNEDTLGFDALAEGGPGVHLFSTQHTMRHY QTAYWDSAMDDHQPWESWDEQGGIDAAIRANARWKAQLASYEAPPMDPGTDEALKEFM AKAKSSAPDAWY" gene 36761..37402 /locus_tag="RSK20926_00130" CDS 36761..37402 /locus_tag="RSK20926_00130" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family protein" /protein_id="jcventer:1101232001803_RSK20926_00130" /db_xref="CDD:31500" /translation="MNKPDKSRIRASEEAWLSAAYEELTQNGVEAVRIMPLAKRLSVS RTSFYWHFKDREALLEAMIQRWEDKNTGNLVARTEAYADSVSEAIFNLFDCWLDSELF DSKLDLAIRNWARNDPALQVRLDLADARREAAMAAMLERFGYAPANALVRARTMIYTQ IGYISMQIREAEDQRLALMPDYVEVFTGAPPAQSDVDRFMARHLPGGNPAVIR" gene complement(37954..40728) /locus_tag="RSK20926_00145" CDS complement(37954..40728) /locus_tag="RSK20926_00145" /note="COG3383 Uncharacterized anaerobic dehydrogenase" /codon_start=1 /transl_table=11 /product="formate dehydrogenase, alpha subunit" /protein_id="jcventer:1101232001804_RSK20926_00145" /db_xref="CDD:33190" /translation="MSNLVTFTLDGKEVTAEAGLTIWEVANGRGLKIPHLCHKPQPGY RPDGNCRACMVEIEGERTLAASCIREPSEGMVVTTNNTRATSARKMVMELLVADQPKQ EEARDKSSHLWDMAELNGVSESRFPKLEEGRIPLLDDSHVAMKVNLDACISCNLCVRA CREVQVNDVIGMAGRGHDAYPVFDISDPMGQSSCVACGECVQACPTGALMPASIMDEK QVGDSKDYDSETESVCPFCGVGCKVSLKVKDGVVKHVEGINGPANEGRLCVKGRFGFD YIHHPHRLTKPLIRRDDAPAKGLNVDPGNLSTHFREATWEEAMDLAGKELMRLRDADP KSVAGFGSAKCTNEEAYLFQKFIRQGFKHNNVDHCTRLCHASSVAALIENVGSGAVTA TFNEIENADVAIVIGSNPIENHPVAATYFKQFTKRGGKLIVMDPRGVGLRRFATEMVQ FRPGADVSMLNAIMSVIVEEGLYDQAYIDKYTENWEAEKEHLAQFTPEKMSEICGISP EQLRRVARTFANGKAGLIFWGMGVSQHIHGTDNSRCLISLALMTGNVGKPGAGLHPLR GQNNVQGASDAGLIPMFLPDYQTVTSDDVRKSFTDVWGGGDFSNEKGLTVTEIVDQAY AGNIKGMYIQGENPAMSDPDADHARDAFAKLELMIVQDIFLTETANYADIILPASALY EKNGTVSNTNRQVQRVRPAVAPPGEAREDWKVTVELAQRIGLPWRYDDVSEVFAEMKL NMKSLNNITWERLETETITYPSLHETDPGQAIVFGDGFPRPEGRARFTPASVIAPDEA PDSDYPMIMTTGRQLEHWHTGSMTRRSKVLDAVEPEANCSLNPRTLKLMGIEPGEMIR LSTRRGSIEIMARADRAIAEDMVFVPFAYVEAAANILTNPALDPYGKIPEFKFSAVKV EKIEGQIAAE" gene complement(40865..42565) /locus_tag="RSK20926_00150" CDS complement(40865..42565) /locus_tag="RSK20926_00150" /note="COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit" /codon_start=1 /transl_table=11 /product="formate dehydrogenase, beta subunit" /protein_id="jcventer:1101232001804_RSK20926_00150" /db_xref="CDD:32078" /translation="MEVIVAPLDNSKGVWKSGKGKGRKTPKGRQLDDQAHSEVLELLG DRPRNRDLLIEFLHLIQDAYGHLSAAHIRALAEELRTGQAEIYEVASFYAHFDVVREG ETAPPALTIRVCDSLSCELAGAEQLQKALEDGLDASQVRVLRAPCMGRCDTAPVLEIG HNHIDHATVEKVEAAIAADDTHAHVPEYETFAAYEGEGGYATLKDLRANGDWEAVQAK VKEAGLRGLGGAGFPSGTKWGFVRANEGARYLAVNGDEGEPGTFKDRYYLERTPHVFL EGMLMAAWAVEAEKAFIYMRDEYPAVLKILATEIKALEAAGIVEEGYIDLRRGAGAYI CGEESAMIESIEGKRGEPRHRPPFVAQVGVFGRPTLVHNVETLYWVCKINREGPECLN SVEKNGRKGLRSYSVSGRVKNPGVHLLPAGSTITDIIEACGGMLDGHAFKAYQPGGPS SGLLPASMNDVPLDFDTLQPHGTFIGSAAVVVLSDQDSARDAALNMLRFFEDESCGQC TPCRVGCEKAVKLMSEKKWDQGLLEELSTAMVDASICGLGQAAPNPIRLTMKHFPDEV " gene complement(42651..43550) /locus_tag="RSK20926_00155" CDS complement(42651..43550) /locus_tag="RSK20926_00155" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101232001804_RSK20926_00155" /db_xref="CDD:30928" /translation="MIELRDLQLLTALARHQHFAKAAKDCGMSQPAFSMRIRNLEEKL GISIVRRGNRFQGLTGEGEMIVRRARSILDDAKALDQEIAASRGEVTGTLMLGVVPTA TAFAAQVVNRLHEIHPRMLVHIDVTTSMAIQQRILDGTIDAGVTYSDSVPPGLVSITD LYQERYVLLAPEPMVARFKDHISWQEAAELPLSLLEPGMQNRRILDRIFAELELKPEV MSESSGFMSAMIMAREGAVATILPQALADALGVIEGTTALPLVGEEEANLHERPICLA TLQRNPELTTVSSLKRVVAAFAQ" gene 43752..44201 /locus_tag="RSK20926_00160" CDS 43752..44201 /locus_tag="RSK20926_00160" /note="COG0756 dUTPase" /codon_start=1 /transl_table=11 /product="deoxyuridine 5'-triphosphate nucleotidohydrolase" /protein_id="jcventer:1101232001804_RSK20926_00160" /db_xref="CDD:40773" /translation="MTDTVKFMRVEGNDLPLPGYATAGAAGMDLRAFLPDGSLTLEPG EVVMISTGLSVELPESTEMQIRPRSSMALKQQIIIPNSPATIDEDYRGIIYVGLYLLG GDPVVLNHGDRFAQAVIAPVLKPEVIEVRELTATERGSGGFGSTGKG" gene 44415..46523 /locus_tag="RSK20926_00165" CDS 44415..46523 /locus_tag="RSK20926_00165" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="type I secretion target repeat protein" /protein_id="jcventer:1101232001804_RSK20926_00165" /db_xref="CDD:32755" /translation="MPQASTFVTSPLALTGTTVDTFYPSLTGLAGGRTAVVWTEESNE AIWLSLLDASGQPEGDPVRVTTPGQDANRPAVVELENGNIFVTYTDLSTSSRVPISGR VFSPDGTPLGESQVVFHSAANSSVAPSSSALSAGGAATVFTNLGLDGSLYGVYFQLTD ANGTPVGGVQRVNQTTSSFQSFGEVTSLQDGGFVVTWQSRNVDGSSYAVMMRGYNADG TARSNEIRVNQYTLFSQRDPEITELSDGRYIISWTSYFQDSSGNGVYARIYNADGTAA TNEFRVNSTTRQDQQSSSVASLPDGGFIVAWVHQVSSREYEVRYQEFDAQGNRVGEEA ILSDGPLDVSAGIVLSAGEDGTVRAIWLNGDQGDRGFTLFTAALNQGTEGTEQSEALS GSANADYLFGLGGADTIAGEAGDDRLDGGAGADLLNGGSGNDSLFGGSGRDSLRGDIG NDSLTGGTGDDTLYGGDGDDRLFGNTSLDTLYGGAGNDYISAGDGVDFVNGDAGNDTI HGRSGWDLLNGNDGNDSIYGSQGDDTLNGGGDDDWLSGGSAWDVLFGNDGNDTLYGNF GSDVQSGGAGNDQLFGGTGDDSLRGGDGNDTLQGNQGVDRLDGGAGDDLLRGGTLRDT FVFNTGYDNDEINDFEEHRDFLLLSTSLTGGETSAANILSTYGSVVNGQVVFDFGNGD VLTLSNLSTLSGLEDNINTF" gene 46696..47595 /locus_tag="RSK20926_00170" CDS 46696..47595 /locus_tag="RSK20926_00170" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101232001804_RSK20926_00170" /db_xref="CDD:30928" /translation="MMRINMEQLRAFLHVVRLDGVRKAAVALNLTQPAVTARIKNLEE SLACELFDRTSRGMRLTKRGELLLAHAEKFEQLMQLVEKDVVDPEGIEGRLRLGVSET IAQCWLPDLVAALHSRFPLLEIEFNVDISLNLRAGLLDGEIDLAILLGPVSEYSVNNI DLPRFPLSWYAAATALEEADPADYLKRPVLTYARNTRPFRELKERLFEQVGPEVSIFP SSSLSACFRLVEADLGVAALPRVLGKDIAAAGKIQEFDPGWVPSPLQFTASYLSEPKS HVAQTAAELAREVALRYSSDKNI" gene 47672..48484 /locus_tag="RSK20926_00175" CDS 47672..48484 /locus_tag="RSK20926_00175" /note="COG4336 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00175" /db_xref="CDD:34058" /translation="MNNDYQTLKNNSIDVQRDAIRSGAYQGHTAGLGQGLLQANLAIM PQEYALDFMRFCQRNPKPCPLTGVSDTGNPMMHTLGADIDIRSDVPAFNVYRDGVLAE EVADISALWQDDFVAFALGCSFTFEHALQRAGLNLWHIEQNATVPMFRSSIATTPAGV FSGPTVVSMRAVPEARVAEVAEISRRYPLAHGAPLHWGDPAEIGIEDIARPDWGDPAP VGAGEVPVFWACGVTPQAALETARLPICITHKPGYMLITDVSESAEIPDYRT" gene 48506..49555 /locus_tag="RSK20926_00180" CDS 48506..49555 /locus_tag="RSK20926_00180" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative transport protein" /protein_id="jcventer:1101232001804_RSK20926_00180" /db_xref="CDD:31825" /translation="MKQTAKLAAALAASLSLTASAALADNPVVLKAVGTWSSLTNYQK HEGPFFNERLAEASGGSIVGEIQSQSGLGLKGFEIMRLVKNGVFDFAFGLPGYVAAEN AIFEGADLSSVTQDITTQRQVAEAYYPTMEKAFAEIYNAKLLMLYPFPSQTLWCNAEV NGIEDLKGKKIRVYATTLGDFVEGAGGTSVTVPFSEVIPALEKGVVDCGITGTMSAYT ANWQQVATHAYTLRVGWGLAFGAMNMDKWNSMSAAQQELMQGEIAALNERMWAETATE DDVAIACITGGDCAIGEKGGMKLVQPTDADLAIRDQIATDVVLARWAERCGADCAENW NNTVGKVLGLSAKAN" gene complement(49579..49659) /locus_tag="RSK20926_00185" CDS complement(49579..49659) /locus_tag="RSK20926_00185" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00185" /translation="MAGPLGGKGCSKNGQHEDAKKGGPIQ" gene 49658..50221 /locus_tag="RSK20926_00190" CDS 49658..50221 /locus_tag="RSK20926_00190" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00190" /db_xref="CDD:34283" /translation="MLETLLKHSRKLSLWLTWAGGTLIVFSAFLVTLEVLLRKIFNVS LGGADEISGYAFGVATAFAFSFALFERAHIRVDALMNVLPRALHPLINMFGLLLLVGF AAIVTLMVWGMVADSLQHGSRSITPLRVPLALPQIPWLIGWILFVASGLLVGLVAVKR WIEGNQAGVQDLIGVKTIDEQIEDESA" gene 50225..51508 /locus_tag="RSK20926_00195" CDS 50225..51508 /locus_tag="RSK20926_00195" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00195" /db_xref="CDD:31781" /translation="MLLKTLLILLALIGLAVPIAASLGWLGLILQWSESPMPLHRAIS DMAWQTSTDFLLVAIPMFVMLGEILLRAGITEKMYDGIVKWLGWLPGGLMHSNIGSSA LFAATSGSSVATAATIGTVAIPQIKKRGYNEPLFLGTIAAGGTLGILIPPSINLILYG LLTNTSVPELYLAGFLPGFLLAALFILTVVVMCLLRPSWGGERLSYTWAERFQALPAL VPPLGIFLVVVGSIYAGLATPTEAASLGVVAAMGLAVFNGKFSIAMMREAIEGTMRTT AMIMLIIIAAVFLNFVLSIIGLTQALTDFVTGLGWPPVQTMLMIVLIMILIGCFMETL SMLLTMAPLVTPIVVALGFDPVWFGILLMVLLETALITPPIGINLYVVQGLRKTGPMM DVMKGALPFVLTMFVMLGLLLAFPGLALWLPALFY" gene 51538..52275 /locus_tag="RSK20926_00200" CDS 51538..52275 /locus_tag="RSK20926_00200" /note="COG2049 Allophanate hydrolase subunit 1" /codon_start=1 /transl_table=11 /product="allophanate hydrolase family protein" /protein_id="jcventer:1101232001804_RSK20926_00200" /db_xref="CDD:42643" /translation="MALSPDWPRISALGFDGFLVSFGEHLTEAANRAALAFRDALERE SWPSARESSASLVSAYLRFDPLRQGHAEIRALLQDLLARQDWYQAPLPRGRRLWHVPA VFGDTAAPQLGEAAAAAGFTPQEAIASLTERPVRIQTIGFAPGQPYLGELAPEWDIPR QTELTRQIPAGALAVAIRQLVLFPMPTPTGWRHVAQTAFQLFRPLGQDPFLLRPGDEI RFEPLEEQALPRLQQDPDGGARFEVIR" gene 52275..53300 /locus_tag="RSK20926_00205" CDS 52275..53300 /locus_tag="RSK20926_00205" /note="COG1984 Allophanate hydrolase subunit 2" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00205" /db_xref="CDD:42592" /translation="MAELIVNSATPGVSLQDAGRAGFLAQGVSRGGAADTLALAEGAA LLGQDPCCAALEMAGAGGLFEASEDLRIALTGAPMQASIEGTPLVWNASHLLPRGTRL KIGGCTRGSYGYLHIGGGIETEQQLGSRSSHAGAGLGQILQPGTRLPAGPDQGTKTTG LRLQPEERFDGGTLNILRGPQTCLFSPEQIAGFESALFRRDRRGNRMGAGLTSDQVDL GSAKGLKVLSEVIVPGDVQITGDGTPFVLLSDCQTMGGYPRIGTVLPSDLPKVAQARP GAAFRFHFVTLEEAAEIEARAAARRAELPKALRPLIRDPGTISDLLAYQLISGMTAGD DLERNRS" gene 53297..54070 /locus_tag="RSK20926_00210" CDS 53297..54070 /locus_tag="RSK20926_00210" /note="COG1540 Uncharacterized proteins, homologs of lactam utilization protein B" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00210" /db_xref="CDD:31729" /translation="MITTIDLNADMGEGFGAWQMGDDAGLLDLVSSANIACGFHAGDP DVMAATMREAVSRGVGLGAHPGFADLQGFGRREMHLPAASLANLVAYQTGAAQALART SGGRLRHLKLHGALANMAARDRAMAQTCYTAALDTAPDLIIMAMAGTAQEDAVRELGC PAALEIFADRAYLPDGSLLPRSEPGAVLHDAEEIAARVLQMLREEAIVAVDGRRLSCR LDTICLHGDTSSALAAAKAIKQTLSHAGIQIARFEGATA" gene 54223..54708 /locus_tag="RSK20926_00215" CDS 54223..54708 /locus_tag="RSK20926_00215" /note="COG1247 Sortase and related acyltransferases" /codon_start=1 /transl_table=11 /product="phosphinothricin N-acetyltransferase, putative" /protein_id="jcventer:1101232001804_RSK20926_00215" /db_xref="CDD:31440" /translation="MTTTIRPANKDDVAAITGILNEAIRKTLVTFTTTEKIESEIAAS INADDTHYLVAEQAGCVVGYASYGPFRQGPGYKHTKEHTIHLAPTARGSGLGRALIEQ LAEEARAENVHVLVAGISSANPEAVSFHAALGFINIGRMPETGRKWGQWLDLILMQKT L" gene complement(54750..56183) /locus_tag="RSK20926_00220" CDS complement(54750..56183) /locus_tag="RSK20926_00220" /note="COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family protein" /protein_id="jcventer:1101232001804_RSK20926_00220" /db_xref="CDD:31361" /translation="MKQMPWLAFTIDRGSRIPVFEQICDGIRMRAVKGDLAAGSLLPP TRVFATELGVSRSTVVTAYEQLVAEGYLQSQPGSGYRLCPVGEVELPSEAMTLQSVAP EEKSRQVACFEAGQPDMRLFPYRQWAKTIARICRRNPQQLLEGGRVFGNFELRQAIAA HVSEWRGIEADPNQIIVTAGATDALEICLRFLAKPGEGIGVEDPGYLPLLRFVRAQGL KPIYLRVDEQGATLPVKDKPPKLVALTPSHQFPLGGAMSPERRQEFLRWALQENAWIL EDDYDSEFRYAGRPIPALAGFDRLNRTIYIGSLSKIFSNALRLGYAIVPQELLEGFQG SMRASGLKASIMPQQPLAEFITSGEFYRHLRRVRRIYGERRKYLLSRLAEDFADFGVV RDTQAGMQLVFHLKEAFDDRSLTRLATDRGLRLQALSEHAEEAPGCNGLILGFCAFSE EEMEPALAVLKSCLEENRDQVTNSARS" gene 56811..58370 /locus_tag="RSK20926_00225" CDS 56811..58370 /locus_tag="RSK20926_00225" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101232001804_RSK20926_00225" /db_xref="CDD:31090" /translation="MQKLMSRVAAAAMAAALSTGAFAETSIKVAYDADPVSLDPYEQL SGGTLQLSHMVFDPLVRWTQDLQFEGRLADSWEQVDATTMRFHLRKGIKFHSGNAFTA KDVDWTFDRIKESADFKGIFAPFTDVVVVDDHTIDLKTAEPFPLVLHTATYLFAMDSA YYSGTTAEGADKSEIVKHGDSFASRNMSGTGPFIVTEREQGVKVVFDRYDGYWDTASA GNVDEIILTPIKEDPTRVAALLSGDVDFIAPVPPTDLKRVEGADGVNLITMPGTRIIT FQMNQNRVEAFKDPKVRLAIDYAINNQGIVDRIMRGFGTVAGQASPAGYLGYSGDYAP RFDLARAKELMSEAGYADGFSVTMMAPNNRYVNDDKIAQAVASMLSQINITVDLQTMP KAQYWPTFDERAADMMMIGWHADTEDSANFHQFLTACPNADNGNGQYNSGSFCNEAAD KLMDAANTETDVAKRTEALQKLEGILYDEAAFIPLHWQNLAWGAKDGMNAGEIVNALN FPYFGDLVVSE" gene 58504..59484 /locus_tag="RSK20926_00230" CDS 58504..59484 /locus_tag="RSK20926_00230" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, permease protein" /protein_id="jcventer:1101232001804_RSK20926_00230" /db_xref="CDD:30946" /translation="MFAYLVKRAIQAVAVMFAISLIAFAIQGNLGDPLRELVGQSVSE EVRQQLRDELGLNDPFLTQYLRFVGNALQGDLGTSYFFKEPALEVILKKLPATLELVL GATVIIIGFSVPLGVYTAIRPDAVLSRVIMALSILGISVPVFLTAIMMIFVFSVEWGW LPSFGRGDVVHVWGYWETNFLSLDGWEHILLPSVALASIMLPLFVRLIRAEMMEVLQS EYVRYAKAKGIAPWRIYFIHALKNTLLPVITVGGVQIGTMVAYTILTETVFQWPGMGF MFLEAVNRVDTPLIVAYLIVVGFIFVVTNTIVDLIYGLVNPTVNIARMGA" gene 59489..60433 /locus_tag="RSK20926_00235" CDS 59489..60433 /locus_tag="RSK20926_00235" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, permease protein" /protein_id="jcventer:1101232001804_RSK20926_00235" /db_xref="CDD:31366" /translation="MSSYIETPNQSRLNRIWQSHMAYSFRRNPVAVVSMAVFLFIAVT SFLAPLIAPYNPYDPAQIDIMNSEYPPAWAEGALPEFLLGTDDQGRDLLSTILYGTRL SIIIGLCAVGLQAFLGISIGLLAGYIGGRLDSLLMRLADIQLSFSTLMVAIIFLAVTQ ALFGSETFNRYAIFFLVAVIGVAEWPQYARTVRATVLAEKKKEYVDSARVLGFGPMRI MVRHILPNSLSPIFVISTVQVANAIISEASLSFLGLGMPPSQPSLGSLISSGFDYIFS GSWWITVIPGIVLVVLVLVINLLGDWMRDVLNPKLYKG" gene 60439..61440 /locus_tag="RSK20926_00240" CDS 60439..61440 /locus_tag="RSK20926_00240" /note="COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, ATP-binding protein" /protein_id="jcventer:1101232001804_RSK20926_00240" /db_xref="CDD:30793" /translation="MSLLSVRDLTVKFAMREQTVTALNGISFDLAKGERLGIVGESGA GKSITGFALMNLLSRPGYIDSGEILFEGDDVVQMKPRALQDMRGNRMAMIFQDPMVTL NPVLTIGEQMVETLRAHRQLSREEARQIAILKLREVYIPSPEERLEQYPHELSGGMRQ RIIIAIALLLDPQLIIADEPTTALDVTIQADIMELMLELCQSNQVSLILITHDLGVVS QMTERTMVMYAGRIIETGSTRAIINDPQHPYTQGLINALPQQTKPGQRLKQIQGTMPA LGRIPAGCPFNPRCEYATATCRSQIPPMSQFAQVQVACHEVQRLQFEAEANRKEELA" gene 61437..62471 /locus_tag="RSK20926_00245" CDS 61437..62471 /locus_tag="RSK20926_00245" /note="COG4608 ABC-type oligopeptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, ATP-binding protein" /protein_id="jcventer:1101232001804_RSK20926_00245" /db_xref="CDD:34239" /translation="MSTALPRPLLDIRNLEKRFDLDHGLLETVKLRGGKLTREMRSVH AVNNVSLSAQKGEALCVVGESGCGKSTVARLVAGLLEPTHGEIHYDGSRIDNLSRGAM APLRKKIQMIFQNPYASLNPRMTIQQTLEEPVRFHNPGYSKGEMQDRVVEVMRSVGVD PAWSKRYPHEFSGGQRQRIAIARALTVDPEFIIADEPISALDVSIQAQVLNLMLEAKE SRGLTYLFITHDLSVVEHFGTRVAVLYLGSVCEVAETRTLFENPKHPYTRALLSAVPQ LKDDRPNHIRLKGEIPTPINLPPGCPFQSRCPMANARCSEEKPMAQKQPDGSLVSCHA VEEDRITEIA" gene 62530..63438 /locus_tag="RSK20926_00250" CDS 62530..63438 /locus_tag="RSK20926_00250" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101232001804_RSK20926_00250" /db_xref="CDD:30928" /translation="MEFNWLKDFIALASSRNFSRAAEERFVSQPAFSRRIRALENAVG VQLINRETLPLSLTTAGEIFLEQSHVMLRTLDETIERCQALDAEDENIVRLAASQSIY TTYYKAEILPLVEAYGLSLDLNSVSWPAEKFSIMLQQGQSDVIISYWHPSMGFLSPLS VSPYTSLTLARDIMVPVAKANPDGSPQFRLGENDKARVPLLAYGSVSVFRPVVESILS GRIGSANILQVSQNALSSTVKAMILEGFGLGWLPQRMCEEELESGELVLAGGKQYYSE IEIRAYRDHNNKKPRLEKFWQELDGN" gene complement(63556..64770) /locus_tag="RSK20926_00255" CDS complement(63556..64770) /locus_tag="RSK20926_00255" /note="COG0523 Putative GTPases (G3E family)" /codon_start=1 /transl_table=11 /product="cobalamin synthesis protein, P47K" /protein_id="jcventer:1101232001804_RSK20926_00255" /db_xref="CDD:42468" /translation="MNKDTRLPVTVLSGFLGAGKTTLLNNILNNREGKRVAVIVNDMS EVNIDADLVRADTELSRTDETLVEMSNGCICCTLRDDLLEEVRLLAGEGRFDYLLIES TGISEPLPVATTFDFRDELGNSLSDVARLDTMVTVVDAVNLLNDFSSHDFLQDRGETM GEEDDRTLVHLLTDQIEFADVVILNKVADAGPQKLEAARQIIRSLNADAEIIEANHSK VPAEKILNTGLFDFDKAHEHPMWAKELYGFADHVPETEEYGIASYVYRARRPFVPERI LEVLNGDLPGVIRAKGHFWIATRPDWVAEFSLAGALSGIQPLGTWWAAVPEAQRPTHD AARSYMQAHWQDPWGDRRQEIVFIGAGIDWPSLKQKMDRCLVPTSVAIGPDTLPDFPD PFPIWRRAQAAA" gene complement(64921..65022) /locus_tag="RSK20926_00260" CDS complement(64921..65022) /locus_tag="RSK20926_00260" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00260" /translation="MVGDLLKPIGAWPKKWAAELTSVKADLAKEELK" gene 65179..66147 /locus_tag="RSK20926_00265" CDS 65179..66147 /locus_tag="RSK20926_00265" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101232001804_RSK20926_00265" /db_xref="CDD:30928" /translation="MQRTDLSLKWLEVFQLAASLGSAQAVARETGLSISTVSHHLHRL EDQLGVSLLDHKKRPMVLTPAGSIFLKYIEEALGLIRKAQAEASSGNLHEARQLRLGL IEDFDSEIGPELAVYLASHMPKCSFTHHTRASHDILELLRKRRIDIGLANRPGETVHD LQETPFLRDPFVLALPVNTPFEPEDFLAGQTNLPFLRYSTAEIISGQIETQLRRLKIA LPQRFEIESNQTLMAMVASGNGWAVTTPLCYMRAKRFHRQVKLHPFPEKSFARHLSMF ATPECAKTSQQIVHKTLQNLVLKRALKPALEMMPWLHGMFELDPCD" gene complement(66201..66290) /locus_tag="RSK20926_00270" CDS complement(66201..66290) /locus_tag="RSK20926_00270" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00270" /translation="MNSRSRLDMSHQGQEAVAGVKSFENLSKN" gene 66289..68724 /locus_tag="RSK20926_00275" CDS 66289..68724 /locus_tag="RSK20926_00275" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase/aminomethyl transferase" /protein_id="jcventer:1101232001804_RSK20926_00275" /db_xref="CDD:30753" /translation="MKTRTRAVVIGGGIAGCSALYHLTQEGWADVVLVERDELTSGTT WHSAAQVTNFGMNQTMVGLKSHSIKLYQELANDPDYPINYHHGDGGIRLANTEAQMQG YRHFASMARGMDVHFEVIDAEECARRHPLVSTENLLGGLWDPFDGDIDPAQLCQALAR RARKAGAEVYRNTPVTGLTQHPDDTWTVHTAKGDIDCDVVVNACGYRVNEVAAMMGVH HPVASMEHQYFLTEEIPAIKEAGHRMPLLRCPISDYYCRQEKNGLLVGFYEQDCKTWG MDGIDPNFVNALCPDDLDRVTDVLEGAFARMPALMETGIHTVVNGPITYTIDGAPLVG PIPGKRNAYCIIGLRAGLGEGGGHGWLLAQQIVHGEACYDTWCIDPRRFGPHTNVELT ALKAIEDYQNEFRFHFPHEHRPAGRNARTTPLTPILASEGAEFAVVNGWERMDYLKPS PEFHPSLSFGFDEAFDLVAAEVKNVQENVGLAEVNGFNRIEITGTDRHSFLGRMFCTK VTQKPGRVGLGYLLNHHGMVKGEATLANLPASDRGPERIWYGSAAASELHDMDWLCQH IQPGEDVQIRSLTNDQTILVLAGPRARDVLSRAARGDWSRQAFPWLSARECFIGIAPA TVLGVSFSGELAYEIHVPNASLYAAYQALCEAGKEHGLQLFGARAVDSMRMEKGFLHW KADLLTEFDPYETGLERFVHPDKGDFIGKPALMEHLQRGPRKKLVTLKIASTSMPAHG GASLMLGEEVIGTVTSGDWGHRTGLNLAYAFVDPAQAEIGNTLQLDACGERVPAEVIV PCPYDPDYTRMRS" gene complement(68851..69984) /locus_tag="RSK20926_00280" CDS complement(68851..69984) /locus_tag="RSK20926_00280" /note="COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain" /codon_start=1 /transl_table=11 /product="Putative trypsin-like serine protease" /protein_id="jcventer:1101232001804_RSK20926_00280" /db_xref="CDD:30614" /translation="MITRTPSRSAVFGLSTAVAATVLLSLAPAPALAVPGSGGYADLV ESVSPAVVYVEVTGKRTTKAEAGAKPHKQMSPGEDFFEEFRRRFGHQMPGQGQMRPTK GAGSGFVISEEGLIVTNHHVVKGADTVEVTLSDGSKHAAEVIGADPLTDIALLQIEAG KDLPVVEFGSSGDLRVGEEVIAMGSPFGLSGTVTSGIVSATSRNINAGPFDDFIQTDA AINRGNSGGPLFNGEGDVVGVNTAIFSPDGGSVGIGFAVPSDLVRDIVADLQDDGRID RGWLGVQIKPLSEDAANVLGLEAGKGVVIESVVADSPAEAAGLKPGDVVVSFGGAEVG ELRDLTKAVAMNNPEEETKMEILRRGKTLEIDVTLGNRADQEA" gene 70107..70811 /locus_tag="RSK20926_00285" CDS 70107..70811 /locus_tag="RSK20926_00285" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="jcventer:1101232001804_RSK20926_00285" /db_xref="CDD:31088" /translation="MGTGSSKEACVKILVVEDDKTTGPYVAAGLREEGHTVDLLANGR EGLVQAAAADYDVLVLDRMLPDLDGLSLIKTLRGAGNRTPAIMLTAVSGVNDRIEGLE AGADDYLVKPFAFGELSARVAALARRPGLQQQETRLCVGDLEMDLVQHKVTRAGQEIP LLPREFTLLEHLLRRKGRVQTRTMLLEAVWDITFDPQTNVVETHISRLRAKVDRPFDN ELIETVRGAGYRIAVA" gene 70798..72171 /locus_tag="RSK20926_00290" CDS 70798..72171 /locus_tag="RSK20926_00290" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensory histidine protein kinase" /protein_id="jcventer:1101232001804_RSK20926_00290" /db_xref="CDD:30987" /translation="MLSLDRNDRLRGLLRSSPVRQSLWLSLLFLLTSALSLGITYYVA KSAQQSAIEESLIQDMAGFQATPSASALAVLVRAQTSESDPKKRLLSYRLPNGRVIAG NSAVTQQEAGFRLVVLGPEPTPVQGPFLLLSRHIHGGLMTVAESADPLEKLQETFLRV FLFSLLPAIAIAVLGGVLLARRSARRLTELEQVLARLTTGDLTARASTPVGATDDLNR ISTSVNRMAEAQENSMMALKQVSADIAHDLKSPIQRVSVHAERLQAIPGLPAEAKEIA AKTLAETKGIDQTFQSLLQIAQIEGGSPAARFQTVDLADTARTIAEIYEPAAEEEGRR LQLDLPEGPVFVRGDKTLIGQLLANLLENALRHTPRGSDIHLSLLGGRQPQLILRDHG SGIPQKEQVNVLRRLYRLERSRSTPGSGLGLSLVQAIADLHRADLTLRTVEPGLEVQV SFPKADV" gene complement(72174..74492) /locus_tag="RSK20926_00295" CDS complement(72174..74492) /locus_tag="RSK20926_00295" /note="COG2202 FOG: PAS/PAC domain" /codon_start=1 /transl_table=11 /product="two-component hybrid sensor and regulator" /protein_id="jcventer:1101232001804_RSK20926_00295" /db_xref="CDD:30987" /translation="MDSSNGYSCFPGHASLEHFNHLATPLWIFDVERHGIWWANPAAI QFWEGRDLQDLLERDFSSDSDTVRQRLRQIVRHSSGDHRLQDTWTLYPQGVPKTVLLS FLPVLIEEGVSAVLIEVKQFVDQFADEEAIRILEAARVSALMVSTYSYEGKLLVQNPA ALSCYGKSSAMLSSNDLEARLKDPEVARALLQIAKTGKTLDTEQLVRTQQGNRVHRIR ARRGRDPVTGGFVTILSEEDVTEQNALRLRMEELNSQLEAKVEERTKRLRESEERYAL ATQSAAIWDWDIESDHLFLSPGFVSSLGYEAADFRDVLVANGISAFLHPEDFGPYQEE LERHLKEPDVPFNHEHRFRAVDGSYRWFAAHGKCLVNNQGRSVRSVGLLTDVTDRKEL EATLFEAQRLEAIGQLTGGIAHDFNNLLTVIQGNAELLKVAEDPDHELADAIKEAAQK GGELTRQLLAFSRKQPLQPEAVNLSELVPDLAEALDRILGDGIKVHCTQDSGLWPVFA DSSQFESALFNLAMNARDAMPDGGSIEISCRNRIWTNAASSGAETGILAPGDYVEIAL KDTGSGMSAENLQRAVEPYFTTKGVGEGSGLGLSMVFGFSRQSGGDTRIESCPGKGTR VSLFLPRSQEKPRLRSLPRTVEILRGSGEHVHLLEDDNAVQGTLRGILETLNYEVSAS TTVSGALRSIGRNPRPALVLADVVLPGGDSGVDLAHFLENKHPEIRVVLMSGFPQAHL EGTQKPLSNFQFLQKPMEKAHLARALRNALDG" gene complement(74534..74668) /locus_tag="RSK20926_00300" CDS complement(74534..74668) /locus_tag="RSK20926_00300" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00300" /translation="MPAGYLVQETKARRGVGEAGGETRHGRITVFLYKFEFAWGVAEQ " gene 74929..76140 /locus_tag="RSK20926_00305" CDS 74929..76140 /locus_tag="RSK20926_00305" /note="COG2203 FOG: GAF domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00305" /translation="MQMNEQYEHGQGASDELMVLSCSTGLEFLQRFVEILADCFEADL VTIGELKVMERECIRVLASSFDSKSLGEMEYEAGGTPCQDVVKSARQQTFLRGIQKDY PLDEMFVQENIQSYIGFPLTNKEGAAIGLIQAAWRREIDQEEADHLTETVGLFLLRLS AELETLHAMRILSALALGHNQQGSNDPIALLCEQMQAALKVRWVIVSETYDKDPSCYR LLSKCQDGIIEQGAMGELRPYEGSPCNLLKNSDQVFIPDGLPERFPDHPGIRSQKLVS YLGQNIRAEDGTLLGHFAILHDGALQPRTSEADLFKLFAARVASELRQMRKKSAQSHG FDQRGLTQADKLAERLAHMDARISELNAEQDFDGVTRNALEHLSNDITASETLLKGIK NSVRPKGSKHY" gene complement(76245..77222) /locus_tag="RSK20926_00310" CDS complement(76245..77222) /locus_tag="RSK20926_00310" /note="COG2301 Citrate lyase beta subunit" /codon_start=1 /transl_table=11 /product="citrate lyase, putative" /protein_id="jcventer:1101232001804_RSK20926_00310" /db_xref="CDD:32456" /translation="MSFFPIEQAPARLNRSELAVPGSQPGMFEKAAQSDVDVIFLDLE DAVAPDEKEQARKNIIQALNDIDWGNKTMSVRINGLDTHYMYRDVVDVVEQAGERLDL IMIPKVGTAADVYAVDMMVTQIEDAKGLKKRIGFEHIIETALGMQNVSEIAGASKRNE SLHFGVADYAASTRARTTIIGGVNKDYSVLTDAAADGSRETHWGDMWHYALARMVVAA RANGLRPIDGPFGDFQDPEGYKAAAKRAAVLGCEGKWAIHPSQIALANEVMSPSDEEV TKAHRILAAMAEAEAAGKGAVSLDGRLIDYASIRQAEVLVEKARQISGA" gene complement(77244..78554) /locus_tag="RSK20926_00315" CDS complement(77244..78554) /locus_tag="RSK20926_00315" /note="COG0112 Glycine/serine hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="jcventer:1101232001804_RSK20926_00315" /db_xref="CDD:30461" /translation="MTMTPRDLKPARQDFFTQPLSERDPELFGAITNELGRQRDEIEL IASENIVSAAVMEAQGSVLTNKYAEGYPGRRYYGGCQYVDVAENLAIDRAKELFGCEF ANVQPNSGSQANQGVFQALIQPGDTILGMDLASGGHLTHGARPNQSGKWFNAVHYGVR EDDNLIDYDQIQALATEHQPKLIIAGGSAIPRQIDFAKFREIADSVGAYFMVDMAHIA GLIAAGEHPSPFPHAHVATTTTHKTLRGPRGGMIVTNDEAIAKKVNSAIFPGIQGGPL MHVIAGKAAAFGEALKPEFKDYQKQVRANAAALADQLIKGGLDIVTGGTDTHVMLVDL RPKGVTGNITDKALGRAHITTNKNGIPFDPEKPTVTSGIRLGTPAGTTRGFGEAEFRQ IADLIVEVVDGLAANGEEGNGEVEAAVRAKVAKLCAEFPLYPNL" gene complement(78643..79617) /locus_tag="RSK20926_00320" CDS complement(78643..79617) /locus_tag="RSK20926_00320" /EC_number="1.1.1.29" /note="COG1052 Lactate dehydrogenase and related dehydrogenases" /codon_start=1 /transl_table=11 /product="glycerate dehydrogenase" /protein_id="jcventer:1101232001804_RSK20926_00320" /db_xref="CDD:31252" /translation="MSAKPSVLVTRRWPAAVEAQLQERYNVSLNTGDQPMSPAEIRAA LKNHDAVLPTVTDKISAEALDVSASKARILANYGVGYSHICEASARNLGLTVTNTPDV LSECTADLAMTLLLMVARRAGEGEREAREGRWTGWRPTHLVGTKVSGKTLGIIGYGRI GQEMARRAHHGFGMEILVQNRSKVAPEVLAQCNARQVDSIEDLLPKCDFVSLHCPGGA ENRHLINSRRLDLMKQDAFLINTARGEVIDEFALAQSLMFDMIGGAALDVFDGEPRIN PTLKQCDNLVMLPHLGSATRESREAMGFRVLDNLEDFFEGRDPRDRVI" gene complement(79617..80507) /locus_tag="RSK20926_00325" CDS complement(79617..80507) /locus_tag="RSK20926_00325" /EC_number="6.2.1.5" /note="COG0074 Succinyl-CoA synthetase, alpha subunit" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase subunit alpha" /protein_id="jcventer:1101232001804_RSK20926_00325" /db_xref="CDD:30423" /translation="MSILLDRSSRVIVQGITGKIARFHTKDMIEYGTNVVGGVVPGKG GEVVEGVPVFNTVKEAVEATDADASIVFVPPPFAADSIMEAADAGIRYCVCITDGIPA QDMIRVKRYMYRYPRDKRMVLTGPNCAGTISPGKALLGIMPGHIYLPGNVGIIGRSGT LGYEAAAQLKEYGIGVSTSVGIGGDPINGSSFKDILQWFEQDPETEVIAMIGEIGGPQ EAEAADYIKNHVTKPVIAYVAGLTAPKGRTMGHAGAIISAFGESASEKVEILSAAGVI VAENPAVIGETIARVMKKAA" gene complement(80504..81703) /gene="sucC" /locus_tag="RSK20926_00330" CDS complement(80504..81703) /gene="sucC" /locus_tag="RSK20926_00330" /EC_number="6.2.1.5" /note="COG0045 Succinyl-CoA synthetase, beta subunit" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase subunit beta" /protein_id="jcventer:1101232001804_RSK20926_00330" /db_xref="CDD:30394" /translation="MDIHEYQAKEILSNFGVAVPSGALAYSPEQAAYRARELGGEKWI VKAQVHAGGRGKAGGVKLCDSEGEIYEACEDMFGRKLVTHQTGPEGKGIYRVYVESAV PIDREIYLGFVLDRSSQRVMIVASSEGGMEIEEISAEKPDSIVRSTVEPAVGLQEFQA REIAFKLGLEPGMVQQMVRTLQGCYAAFSELDATMVEINPLVITGDNRVLALDAKMSF DDNALFRHPQISELRDKSQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTI KLAGGEPANFLDIGGGASPERVAKAFRLVLSDDNVQAILVNIFAGINRCDWVAEGVVQ ALRELEIDLPVVVRLAGTNVEEGQKILAKSGLPVIRATTLMEAAERAVGAWQNDLTQA TKVRAVK" gene complement(81728..83056) /locus_tag="RSK20926_00335" CDS complement(81728..83056) /locus_tag="RSK20926_00335" /note="COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase" /codon_start=1 /transl_table=11 /product="aminotransferase, putative" /protein_id="jcventer:1101232001804_RSK20926_00335" /db_xref="CDD:30424" /translation="MRGGKLGKSACHQEFTGASGPVQPKGQHMTVEIFPSLEIPETLA AGPGPGNTDLRVLQAFSGAGVADHMQPDVLRGMVECKFMLRDLWGTKNTYTYGVGGTG FSALDCMFNAILPGDSVVAFQNGTFSGVDALTICMKAATREELAADALNPQAASVTVV DVPHGTSVTGEMVEGVLADKKPKWAFMAHWETGSGRINDIKGFSDACEKHGVMGLIDA VSSLGIEDFSIDDYPGVVGWASCPQKGVLCLPLTYAPVSFTDRYIETVKANGCASYVH NPILEARHWGIMDGEDVAAGAYHRTHSGYAVAAFHEALRITLQHGRAQKARDYAFHEQ ALRDAVTAMGCEVTSNMTSLVVLNLPGDLAGREKELVGNCRAVGFGIWPTLSEPVQVR IGILNQINRAAITDIVSRFGKAMNDLGAGLDLEEVLTGLDNHYDTALAAE" gene 83192..83839 /locus_tag="RSK20926_00340" CDS 83192..83839 /locus_tag="RSK20926_00340" /note="COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator, LuxR family protein" /protein_id="jcventer:1101232001804_RSK20926_00340" /db_xref="CDD:32379" /translation="MVNPGSRPIDIMLADSNPLVLSAMSEIFERDPRFSLVATSATAE GFLGIVMRVPVQVGIIDWNLPVLGAAKLIEVLREHENAPRLVVYGDADGDAPRLAMQA GAAGFAPRSGEAEGLLETCLDVAAGKMVFPFIDVRKMQQDPIHSLSRKERAILESLAK GMSNRELSKALQISTNTVKFHLSNIYEKLSVKNRAQAIAYYYSAQVSGNLPQGKG" gene complement(83858..84355) /locus_tag="RSK20926_00345" CDS complement(83858..84355) /locus_tag="RSK20926_00345" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00345" /translation="MCMITVNDRMQSEYRYALDAPEGASFDPDFQPFHSPAEMLALGV FEGKYMNDCREEFPENWFEKAKLSAVADPEVNYFGIKSRQPLSHWRDKGWIHGPDPRG WFQWYCRYYLGRRLPEVDQIQIKRWRGFARHAGQIRANCHPGDLFCRPRQRQALLQWA YDPFL" gene complement(84374..85642) /locus_tag="RSK20926_00350" CDS complement(84374..85642) /locus_tag="RSK20926_00350" /note="COG5527 Protein involved in initiation of plasmid replication" /codon_start=1 /transl_table=11 /product="Plasmid replication initiation protein" /protein_id="jcventer:1101232001804_RSK20926_00350" /db_xref="CDD:41119" /translation="MSDSQIDMDRLSGALRRETVKKNVAAIHISGKLSLLQRKLSNVL LLNAYDALTSAQSHTIDARTLAAIVGYNSNDFDTLRSSLRALAETTAEWDMLDEQGRQ EWGVSSLLSFAKLKGGVCEYGYSPVLAQKLHDPKIYALINVHIQRNFSSGHGLALYEN CYRFVRTGSTGWWSLEVFRKLMGVDGSSYYESFKHLNAKIIKPAVAEVNKCADIEITP EFQKKGRSVTDIRFKIKSNPQMAMFQIDDSEGLRNLPVYKALTGQGVSDRLARQWIAE HGEAYVQEKLDYMAGQGAVKSSVGYLSAALREDYRPTQAAPKPVPEPSPEALEAARLR VEEQRREDEAFAARQAERAGRARQLEVVETLVSRRNPTQRDADRQLFMSGLEDDLERE NFRAHGWRSALNASAIIAFWQELEPEAFEN" gene 86239..87657 /locus_tag="RSK20926_00355" CDS 86239..87657 /locus_tag="RSK20926_00355" /note="COG1192 ATPases involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="ParA family ATPase" /protein_id="jcventer:1101232001804_RSK20926_00355" /db_xref="CDD:48370" /translation="MNRGTQSEAYPVSKSPPSSLPPYLNLDPEVAAKKLPDPIGTARF AKAAAFCSKGREDLARRGYAPDGQKRLRKFSTWEITKYLIPVAPAHLRRVLKANPDLP QGEGDGGSKWFTLEEVLTLRQHFASEGVSTKEYLPYRPEGQPAKVVAVANFKGGVGKT STAAHLAMSAALDGYKVLVIDLDSQGSMTSIMGGKVADEWQTVFPLVAKDYAKAVTEE NLVRAAAGQPEIPLDETLQEALKTTPEDVIQKTHWPNIDLIGAQLNLYWAEFQIPVWR MGLRSWPLWDGLTNFLEDEKILDQYDIVFLDTPPALGYLTINALAASDILLVPLGASY LEFDSTGRFFDMLYTTFASIEDGENAAQRAAGLPEIKFEWDVVRAIVTRFDASQQTDM ANVIQAYFGDFMNAYRQDYTALVGQAGEQVNGIYEADYRDFNRDTYVRGREAFDRTYA EFKEVLIGCWWRDAQMGEMQDG" gene 87650..88717 /locus_tag="RSK20926_00360" CDS 87650..88717 /locus_tag="RSK20926_00360" /note="COG1475 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="ParB-like nuclease" /protein_id="jcventer:1101232001804_RSK20926_00360" /db_xref="CDD:42187" /translation="MAKRRRLIAPDASELQELEEGFAAKPSANPFETKSAVPPIAQVA AEAASLNSMTNVTDRVALAQDQGDAARWREAEGAGLVAQQIVLAEIDPDFIRRDRIKE DPEAMEELISSIREHGLRSPIEVTRTEDGYGLISGYRRLQAYRALQNGGEGSDRIPAF VRSGNTGQSAYVSMVEENEVRANLSHYERGRIAVLAAGQGVFPSVEEAVNVLFAAASK AKRSKVRSFAVVHEALGDLLQFPTGLSEKAGLALATALRDGGQARLRNALGQGTAVDA KSEWQLLDKALKQTGAVPKDRSRGGRPQEVTRLPARPLPKGGALSAEVAADSTRIELK GRVLNPETVERILQMIARQIG" gene 88793..90442 /locus_tag="RSK20926_00365" CDS 88793..90442 /locus_tag="RSK20926_00365" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="transcriptional regulator, SARP family protein" /protein_id="jcventer:1101232001804_RSK20926_00365" /db_xref="CDD:33428" /translation="MCRFSPILPIGGIARQDADMAGKLQIQPWGMFQLKSAEGVCTPK GMKESGLVALLAFSPQMHRSREWLQDRLWSDRTTSQAQGSLRRALSNLRKSLGPAADV VGSDRNSIWLETAQVEVQQTPPQPEAEFCGSLTIKDPEFEDWRRDQQLQQDPPEEELF RIQPSAPVQSAPRLRVLIQSLGEPDDRIEAFAMEHLSMLLTKRLLTLGEIEIVTEGSG QAEETSAFSTTIELRSHALGGWLSIHLRLLSGEHRSCFWADHLSLELDMAALMTRNEL APFVARAAGAIAHRLPQRQQSDLPRCLRVQRASELLFTGNRSRIDHGDLLLEKLQGEE NDGMVSAWRSFAKLTQALEFGDFSPEVTQQALSLADDSLIDSRSNSVVIALASIVNMK LGSDFDYGFYLAKEAHGYCGDDPYALNALCQAHFFRSEYDQAYQLSKTARSVAAGLPN KYYWDIQACLAALGVGQLEEARDFAWQSHLRWPSCRPPLRYLVALSLLQGDWDAAQSF AAKLRRLEPGFDFSQLLTEDYPVETLRRTGMISELSGLLSS" gene complement(90526..92244) /locus_tag="RSK20926_00370" CDS complement(90526..92244) /locus_tag="RSK20926_00370" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00370" /translation="MTLKFQPQTGGQDFSPLPENYLPAALPYLTGQQNLPPLFLLAPE PKPGNSKPPEPVKIPAEDLADPARMLSHTESGREGFLLPHGELSQMTLSSFGPEVANG PVTALIDTGIAFWNPAFRLPDGGNRIKEIAFLGLAGESQSLSQEEFAPFYALADGPGG EARVIEALGQRFEGSLYEDGFKPGQFSHGTAMAGLLIEAEGAAPAPPPLFAVELPAIA VFDRSGASLQAVLLQAIKTCIQGFEGSGISHLNIVLPFAFLGGPHDRSHPGLDFLHQA LERHKPGFEVKLFLPSGNHRQDRQHARFPALQTGSEQAITWRLHHGDHSSNSLDICYA AEDAPTLELQAPDGSVAQLKLTPGSYSKILFGDRVIGGALLRSTSQNHHRLRLSCSAP ASKDLTAPRVPAGDWQITLRAISGGVGEASLWILRDDSNLHLLGEDPVRPSEFVDPHH RERLSGGEIPLKDQDLSAIRQSGTASTLCASKHLRVVSVKALHQPHPGGSCRDSWYSG LPLPDGEDLQGELVDQGWAAPGLRLLGNGSAQRFRVSGSSFATALAARKAGIEQKQAL AAAPST" gene complement(92256..93290) /locus_tag="RSK20926_00375" CDS complement(92256..93290) /locus_tag="RSK20926_00375" /note="COG0671 Membrane-associated phospholipid phosphatase" /codon_start=1 /transl_table=11 /product="phosphoesterase, PA-phosphatase related protein" /protein_id="jcventer:1101232001804_RSK20926_00375" /db_xref="CDD:48085" /translation="MLLSAALDATAKSLNAAWQAKTSDDLEWIAATPDHVLDFERLNS RHRMSLIQSALTADITVAAKNTKVLVSASGSEIASIELHRDVSDPAVAQFWNGQLAKV HNRKWHRDERLSEIVLQQTDILSFMTLPTNLGPTTHPYTLLYLQAVLKAVFKVTSEVK RHFQLVRPADLAPEINPVIQTPAHSAYPSGHATESFSLAVVLETLLFDGASTELKSIA ARITDNRAIAGVHYPADGLAGATLGLALASTLLSRTFDKAGGTGSTIEPIFAELHHSL DADAVTAGPQSDGTVQVTLCPNSEIEDLTGDLLRFPHPGNLKPNTGEGLPQQALAWLA GKVLKECGLG" gene 93295..93468 /locus_tag="RSK20926_00380" CDS 93295..93468 /locus_tag="RSK20926_00380" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00380" /translation="MGCPECAISIELFEELELLEEFELFEELELLDEFELFAWAIRHP PLVMLSLQIPVFR" gene 93789..95102 /locus_tag="RSK20926_00385" CDS 93789..95102 /locus_tag="RSK20926_00385" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00385" /translation="MLRSGYLEECLSFLKQTRGNAQRRAWLRAELAEAKRSEVSTARR LAEVLGRRIRKRDREYCKQLVETRRIFFLEPAEPKKGQNPSSLRMSHLRYARLCSQDL RAAISTVLYSIRNSGRNESSRKPRERLKEEILALVPPAKSLLRRMQLARAELTKAREG IQQLQNALQACQQARVSVAEAETCHRLQTNLEAMTLILDRYEHSLGPELDEFCHEGNL SDFAQDLVKGQQTQDLKPKAWKVIGAGLCGMGATAMLLAGPDKLSQYGQLAGWGAVSV FAALFFAVLCKMRFFHNGQTQLRQRRLAALTALFELPALEGATSDVGRQILHLKALRW RHLRELPSLMSLQREPMSFDFPRFDLYQVSSPSGAFAGSGAMSGAMPVLCATGERARG KSNAALQIPPPQAPHRFAAVSSFAENALCPEKTLKEPPIEMKESS" gene 95205..95885 /locus_tag="RSK20926_00390" CDS 95205..95885 /locus_tag="RSK20926_00390" /note="COG0313 Predicted methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00390" /translation="MATRAELDAALALIQVGIAETLRASSIEIGHHSRRMRRALAPRD SVRSQLVQDLQAARAASGGSLHLATARALESGSDLLMALAVQPGNPTLVAVPTGADFC IDTGQLVVQGITAGSGEKQIEAAWILFEGRAAVFETVHRNGAPVFSQRRFALARCLGD TLLEFGGSTRDETRLKAWLQDLERAAMAISLDGAGMPGDPEQMRRWILTHLRTTAQFL ERLIQEPA" gene complement(95895..97211) /locus_tag="RSK20926_00395" CDS complement(95895..97211) /locus_tag="RSK20926_00395" /note="COG2951 Membrane-bound lytic murein transglycosylase B" /codon_start=1 /transl_table=11 /product="transglycosylase, putative" /protein_id="jcventer:1101232001804_RSK20926_00395" /db_xref="CDD:32773" /translation="MKQGASVGGDCDCFGGSSLFLCRLFYRPAWLLVFLVATFSVAPA SAANRAKIERQFQTWLKQVIWPQAQAAGVSQQTFRAAFKGVTLNWELPDLSPPGSKPS VPKRQRQAEFSAPAKYFSRGSLDGTTAQGKRMAQQHRTALRRAEQATGVPGRILLAIW GRESAFGRAKIPHNAFQVLGTKGFMGRRAEYFTEELLAALQIADAGHVSPGAMKSSWA GALGQPQFMPGNFLKFARDGNGDGRADIWKSEADTLMSIAHFLAQHGWQKSRDWGFEV KLPATVSCTLEGPDQGRPISDWEAMGIKRVSNRPFPAHERAGEGFLMMPAGRNGPAFL VTPNFYVLKDYNKSDLYALYVGHAGDRIDFGSGDFTQGWTPVDRLLRSDVAKMQETLE RLGHDVGGADGLVGFKTRRSIGRWQQANGQEASCFPDARLVKRLQR" gene complement(97280..98269) /locus_tag="RSK20926_00400" CDS complement(97280..98269) /locus_tag="RSK20926_00400" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="two-component hybrid sensor and regulator" /protein_id="jcventer:1101232001804_RSK20926_00400" /db_xref="CDD:30987" /translation="MRPHLARKWRPSLALVLGGGLAGTLLLSFLGLVALRYLGPEIGF RNAAALLGIGILLATGVLGWLLVRLLLQPIQALEHYAAKVVDHHRDQALPEAPDHVGT RELRKLAENTIGMATALHNRELSVRTFTDHASHEIKTPVSAIRAATELLQDGPGLTEA DQQLVDQVLGATRQIETQLAALRAVTKARETRHLGQCRIAELLPWATAQFPFLNVTCI APDHALPLSEEGVKLLLTQLLSNASEHGAKQVTLTVKPGEGLIDLLVQDDGTGISKGN EPSIFDPFFTTKRAQGGTGMGLTILRSMLLAHGGEISYLPSPKGACFQVRFFD" gene complement(98266..98949) /locus_tag="RSK20926_00405" CDS complement(98266..98949) /locus_tag="RSK20926_00405" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="jcventer:1101232001804_RSK20926_00405" /db_xref="CDD:31088" /translation="MKILLVDDDPRLRELVRIALERADWQVITAADGQEALLHAAREA PDLIVLDIGLPELDGFEVCRRIRQRSEVPILFLTARDDEVDCILGLELGADDYVTKPF SPRELVARIKAIAKRSRANGTVPVNHGALTLDPQAHRCWLNGQEIALTAREQSILQLL TKAPGRLCSKPELIHHIWGAGSQVSDRTLDSHLRNLRGKFSEAGNPELIETVHGAGIR LRDSGQTGA" gene complement(98927..100390) /locus_tag="RSK20926_00410" CDS complement(98927..100390) /locus_tag="RSK20926_00410" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00410" /translation="MALILLALTALGDFLFWQYQPGLSLALFAFVVFAAVLLCSPPQS ARNATRPALLLLASALPVIEHYQALSTLFLGLGTLMAVSWLRQEPDTPLLDLLSATGK LAKSLPLGGIRNFLALLRSRGDSSGPQRALLLQALRNWGFPLGGTFLLLSLLVEANPV LEQQLAGLMELDFDLATLIRRFLFWIGLALVISPVLTGPHPAKATPQKAEDTPEAVDG TAKPAAGRKSWLGLNPGSVLRALVVFNLIMALQTGMDLSILIGGATLPEGITLAEYAH RGAYPLLVTAMLAGAFALAARPFLKSHKALKPLVLIWLAQNALLGVTAYMRLDLYVES FGLTYLRVHSMIWMALVIAGLLLTAWQILRARSNLWLLLRCAALGTATLYAACFVNFA GLIAYQNLTRENPNQIDWYYICTLGPMAAKSVQLAQEERPENHPPSGYANCWPDMNDL LAKQNWREWGFRSWRLRAYAAPQTTTKAPGHEDPAGR" gene 100781..101929 /locus_tag="RSK20926_00415" CDS 100781..101929 /locus_tag="RSK20926_00415" /note="COG2951 Membrane-bound lytic murein transglycosylase B" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding protein, putative" /protein_id="jcventer:1101232001804_RSK20926_00415" /db_xref="CDD:32773" /translation="MILTRRSFAFGLGAFGLAACSDSSVTTPGQPVVKPGLPADLRPV PNAGYDAWVASFQGRAQAAGISDATFRAAFRGAGYLPGVIKRDRNQTEFKRTLEDYLS IAVSDERLTKGRAAYQRHGGTLRRLEAEYGVAAEIITAIWGLESFYGERRGDVPVISA TSTLAYDGRRGSFFEKQLIAALKILQNGDISPARMTGSWAGAMGHTQFIPTSYQAYAV DFTGDGRRDIWSEDPSDALASTAAYLARNGWTRGLRWGGEAGAGAPSGTVIQPQEGGP KFAVTSNFRAIKRYNNSDAYAIGVGHLADRIAGAGPLRGKFPPDANGLTKDDRIALQR RLTAKGFDTGGADGVLGPNSQAAIRAYQSSIGLPATGQPSPELLRRLG" gene 102025..102249 /locus_tag="RSK20926_00420" CDS 102025..102249 /locus_tag="RSK20926_00420" /note="COG2336 Growth regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator/antitoxin, MazE" /protein_id="jcventer:1101232001804_RSK20926_00420" /translation="MIETKIRKVGNSAVLTLTTEMLAILDAKEGDTLFVVRGDDGSLR VMAHDPSVAEALAAAEAVMDENRDLLQALA" gene 102246..102635 /locus_tag="RSK20926_00425" CDS 102246..102635 /locus_tag="RSK20926_00425" /note="COG3654 Prophage maintenance system killer protein" /codon_start=1 /transl_table=11 /product="Death-on-curing protein" /protein_id="jcventer:1101232001804_RSK20926_00425" /db_xref="CDD:44915" /translation="MTPPIWVPLAVVTIFHDRQISRHGGAPGMRDRALLEMGCARAMN LAAYSEEATLADIAAAYAFGIAKAHAFVDGNKRTAFVTAVTFLRLNGYHFRPDPIEGV RMMEDLARGAVDEAQFSQWLSAGMTPL" gene complement(102896..104446) /locus_tag="RSK20926_00430" CDS complement(102896..104446) /locus_tag="RSK20926_00430" /note="COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component" /codon_start=1 /transl_table=11 /product="conserved hypothetical permease component of C4 dicarboxylatetransporter" /protein_id="jcventer:1101232001804_RSK20926_00430" /db_xref="CDD:34282" /translation="MAEYLDILMFAALVLAILSGFPVAFSIAGTAILFAILGWALGVM NLNLLGAMSQRIFGLLTNNVLIAIPLFVLMGAILEKSRIAEDMLDTMGRSFGQLRGGL GISVILVGMLLAASTGIVGATVVAMGMIALPTMLRAGYDPRVASGLVCSAGTLGQIIP PSTLLIILSDVVSNSYQQAQYEQGKFSIETISVGQIFASALLPGLTLVGLYILYVLIR GALRPQDLPPAPSDLPRPPLAEVLQAILPAILLILAVLGAILSGIASPTEAASVGGIG AVLMAAVKAGANRRFLLIGTACLILLAIGAGLFPVRLQRSDLTGGDYALGALYVLLTL AGLAAILMALRNLIAEKVLQPALNSTLTMTSMIFATILAAGIFSLVFIGLGGEDRVHG FLAEMPGGPMGALVFSMLFIFVLGFFLDFVEISVIVLPLVLPALILMGHDPIWLSVLI AINLQTSFLTPPFGFSLFYLRGAAPKEITTGQIYAGVAPFILIQVLAVALIWFLPQIA TYLPRVMF" gene complement(104439..104957) /locus_tag="RSK20926_00435" CDS complement(104439..104957) /locus_tag="RSK20926_00435" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /protein_id="jcventer:1101232001804_RSK20926_00435" /db_xref="CDD:34283" /translation="MKRAEMQGFLHFLDGISRTTGSLTRWLALGMLLAQFLIVIARYV FGLSSIAAQESVLYMHSAMFMLGAGYTLLMDGHVRVDIFYDKLGSLGKNRIDLLGHLC LLMPAMVMVIYYSWPAVANSWKILEGPISVGGIKAVFLLKSLIPAFCILVLLQSLACV LRILLGGERANG" gene complement(105017..106165) /locus_tag="RSK20926_00440" CDS complement(105017..106165) /locus_tag="RSK20926_00440" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="conserved hypothetical extracellular solute-binding protein,family 7" /protein_id="jcventer:1101232001804_RSK20926_00440" /db_xref="CDD:34281" /translation="MSMLKNLKYMLNKSITKRGAIMKRRDFIKIGAAGAAASTLAAPA VAQGIRQWNMVTAWPKNLPGPGVAAQMLADRITTLSGGRITVKLHAAGELVPGRGVFD AVSEGTAELYHAVPAYWGSKSKGILLFGSQPFGLRADEQFGWLYHGGGQALYDEIYAR FNLKPFLCGNSGPQWQGWFRDEIHSLDDLKGLKFRTTGLASEMCSKIGMAVQAMGPRD MFQALQTGALDAGEFIGPWTDSAIGFYQVAKNYYWPGVGEPSSAEECAINATAYAELP DDLKQAVSFACESLYNPVWTEYTTKHAKALAQMVANEGVQVRNLPADVIAAMGAAAAE VMAELAEDEDELVRRITASFTEYRDSVGSYMSYADNGQMNARAKVLGY" gene 106278..106976 /locus_tag="RSK20926_00445" CDS 106278..106976 /locus_tag="RSK20926_00445" /note="COG2188 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="Histidine utilization repressor, gntR family protein" /protein_id="jcventer:1101232001804_RSK20926_00445" /db_xref="CDD:32371" /translation="MSTRSSWTSIRDEIKRRVQAREVLPGDKLPNDQELAQEFGCART TVQRAMQELAATGTVVRRRKGGTTVAAHPVTRTTFDIPITRLEVEALGQDYGYFLVSQ GIEQISRSAAASFGLQDQPEMLHVRALHLAGNRPYIYEDRWISQETVPEILDVDLTRE SANEWLILNRPYSDCEVRFLAKKATPQEAELLETEAGEALFVMERTTWSDSAPITRVR AIAAPGYQLTARAK" gene 107085..107879 /locus_tag="RSK20926_00450" CDS 107085..107879 /locus_tag="RSK20926_00450" /note="COG1414 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="regulatory protein, IclR" /protein_id="jcventer:1101232001804_RSK20926_00450" /db_xref="CDD:31604" /translation="MRDLKDDKRFANTLARGLSVLRAFGPNDDGLGNLELSERTGLPR STVSRLTFTLCALGYLTHGRHHEKYRLGPAALALGNIAGASFGFVETAAPIMQRLADE TMTLLGVAIQDDDRMLIVKTWRPKNSTTTWLDVGYRMPLLTSSSGAAFLGALSRSELQ KQMAGVADEERQRYEEARKRNQAKLLNDGYAFVQGDQRYNLSINAIAAPYRPSEFGEP VVFFSGARAQDLDDKRIADSHGPALVAALQELLHITGRRFPVMAEE" gene complement(107983..108504) /locus_tag="RSK20926_00455" CDS complement(107983..108504) /locus_tag="RSK20926_00455" /note="COG0517 FOG: CBS domain" /codon_start=1 /transl_table=11 /product="CBS domain protein" /protein_id="jcventer:1101232001804_RSK20926_00455" /db_xref="CDD:32729" /translation="MPSSFQAPKRGDKAKETTHSQSLISNTAQENATVRKLIDHKGRS VFSITPDDTLSTAVKVLADKHIGALLVTDADGALVGILSERDIVRKLAATPGQTLPQT VAENMTKNVQTCSLDDQLVDVLKTMTDGRFRHIPVLEDGKLCGMLTIGDVVNYRLLEL EYEAMQLKQMIVG" gene 108630..108773 /locus_tag="RSK20926_00460" CDS 108630..108773 /locus_tag="RSK20926_00460" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00460" /translation="MIVTAVLAGTRYRRVWKEEGPRWQLWFFGLIAAISLLLLAFVPL EVG" gene 108778..108864 /locus_tag="RSK20926_00465" CDS 108778..108864 /locus_tag="RSK20926_00465" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00465" /translation="MARRPGGPASGLGPTGKAQAEGRFRNEL" gene complement(108898..109146) /locus_tag="RSK20926_00470" CDS complement(108898..109146) /locus_tag="RSK20926_00470" /note="COG2991 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00470" /translation="MSTFLLAFGLLALVMLGMSLGVLLMGKTIKGSCGGLNAISGADK CVVCSKDIDPDSPLRDKLQCKRARKMLEQMEAEGNKEA" gene complement(109159..110097) /locus_tag="RSK20926_00475" CDS complement(109159..110097) /locus_tag="RSK20926_00475" /note="COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis" /codon_start=1 /transl_table=11 /product="thiamin biosynthesis lipoprotein ApbE" /protein_id="jcventer:1101232001804_RSK20926_00475" /db_xref="CDD:42401" /translation="MGTTYNITALDKSADIDADALEVAIQAQLSDVNKKMSNWDPNSE VSRFNSDSSTEPVEVSTEFAEVMTAANEIHDKSNGLFDVTLGPLIEIWGFGARNSESP IPSDEAIASALEVVGQKKVLTLTSNPDTLQKSLPETSIYLAAIAKGYGVDQVAAVLRD AGISDYMVEIGGDLVTSGQSPSGEKWRIGIERPDAVSKTVEEIVALSGLGMATSGDYR NYFEEDGVRYSHIIDAGTGRPITHGTASVTVLAKDAMMADGWATALLVLGQERGMKIA EEEGLAVLFIARNPETAEIGFETTVSSQFEKLQASK" gene 110483..111727 /locus_tag="RSK20926_00480" CDS 110483..111727 /locus_tag="RSK20926_00480" /EC_number="1.6.5.-" /note="COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit A" /protein_id="jcventer:1101232001804_RSK20926_00480" /db_xref="CDD:45789" /translation="MGSDYLGLKPRLAVQEGDVVAAGTPVFANKDTAAAQVVSPVAGR VKAVNRGARRVLISVEIEVDPAAAEPVDFSAVGDVTTAEGLAERLCAAGLWTSFLTRP YSKVPDPESRPAALFVTAIESEPLAADAALIIKEQKEAFAAGLKAVAMLSEGKTYLCQ GAGEALPGADLPGVEAASFEGPHPAGLAGTHMHFLEPPTAAKTVWSIGYQDVIAIGHL LLTGKINSERVIALSGPLVGQPRLLRTIQGASMADLTVGGIDTSVPARMISGSILSGR AGEGADGYLGRYARQVTVIEEDQKQIPMGWIRPMASKYAVQPVLGSLFSKKLYALTSN LNGGRRAMVPTGTFEELMPQDFLPTQLLRALLVMDTDQAQALGALELDEEDLGLVGFA CPAKYEYGLALRDSLTKIEKEG" gene 111731..112930 /locus_tag="RSK20926_00485" CDS 111731..112930 /locus_tag="RSK20926_00485" /EC_number="1.6.5.-" /note="COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit B" /protein_id="jcventer:1101232001804_RSK20926_00485" /db_xref="CDD:31990" /translation="MGLRNFFDRIEPNFTKGGRWEKLFPVYEMVESFLYTPKTVTTAA PHARSYVDMKRIMTYVVIATIPCILMGLYNTGLQVNTAIGTYGASGWRAAIIEFLGIG FDPQNPIGNMVHGLLYFLPIYITTLVVGGIWEVLFATVRGHEVNEGFLVTSMLYALIV PVSIPLWQVALGISFGVVIGKEVFGGTGKNFLNPALTGRAFLYFAYPAYMSGDTIWTP VDGFSGATALSVSASQGFDQLAANGVTWMNAFIGTIQGSFGETSTLACLIGLAFLLIT KIANWRLIVGCMAGMVGFSLLLNAIGSDSNPMFAMPWYWHLVTGGFAFGMVFMVTEPV SASHTNMGRYIYGALIGFMVVMIRVINPAFPEGMMLAILFGNVFAPLIDYFVVQANIK RRAKRHV" gene 112923..113729 /locus_tag="RSK20926_00490" CDS 112923..113729 /locus_tag="RSK20926_00490" /EC_number="1.6.5.-" /note="COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit C" /protein_id="jcventer:1101232001804_RSK20926_00490" /db_xref="CDD:32696" /translation="MSEAQNKGAIQRFLEASPDSTGKTLFVAIALCLCASMIVSAAAV ALRPTQEINKLKDKQVNILQVAGLYEPGVDITEAFAASFEPRVLELATGRFTDQFDAA TFDDRASADDPATSIALEEDPASIGRQSKFMTVYLLKDDAGEIDKVILPLHGYGLWST LYGFIAVEENGNDIFGLQFYSHAETPGLGAEVDNPRWKALWSGKRLTDENGDLQITVA KTAPAAGADFHVDALSGATLTSVGVDNLVRFWMGETGYAPFLANLKAGDF" gene 113729..114382 /locus_tag="RSK20926_00495" CDS 113729..114382 /locus_tag="RSK20926_00495" /EC_number="1.6.5.3" /note="COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD" /codon_start=1 /transl_table=11 /product="NADH-ubiquinone oxidoreductase" /protein_id="jcventer:1101232001804_RSK20926_00495" /db_xref="CDD:31538" /translation="MAQTRREMLLDPLVDNNPITLQVLGICSALAVTSSLKVALVMTI AVTLVTAFSSMFISILRNQIPSSIRIIVQMVIIASLVILVDQVLKAYAFEISKTLSVF VGLIITNCIVMGRAEAFAMKNPPMASFIDGIGNGLGYGLILMLVGFFRELFGSGSLFG VTILETVNNGGWYVPNGMLLLPPSAFFIIGLLIWGFRTWKPEQVEEREHKIQTVEAH" gene 114382..114990 /locus_tag="RSK20926_00500" CDS 114382..114990 /locus_tag="RSK20926_00500" /EC_number="1.6.5.-" /note="COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit E" /protein_id="jcventer:1101232001804_RSK20926_00500" /db_xref="CDD:32391" /translation="MEALLSLAVKAIFVENLALSFFLGMCTFIAVSKKISTAIGLGIS VMIVQSITVPANNLILTYLLAPGALAWAGFGEVDLTFLGLISYIGVIAALVQILEMVL DKYFPPLYNALGIFLPLITVNCAILGGSLFMVERDYGFAESVTYGVSSGFGWALAITA MAGVREKLKYSDIPDGLQGLGITFITAGLMAMAFMSFSGVKL" gene 115007..116230 /locus_tag="RSK20926_00505" CDS 115007..116230 /locus_tag="RSK20926_00505" /EC_number="1.6.5.-" /note="COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF" /codon_start=1 /transl_table=11 /product="Na(+)-translocating NADH-quinone reductase subunit F" /protein_id="jcventer:1101232001804_RSK20926_00505" /db_xref="CDD:32698" /translation="MTTFALGILLFTLIVLALVTIIIAARSKLVSTGNVNITINGEKT ISVPAGGKLLQTLAAEKLFVPSACGGGGTCAQCRVKVHSGGGSILPTEESHITKREAS CGDRLSCQVAVKQDMDVEVPEEVFGVKKWECTVRSNENVATFIKALVLDLPEGEDVNF RAGGYIQIEAPAHALKYTDFDIEEQYREDWDRFNLWQFTSTVTEPVERAYSMANYPDE KGMIMLNVRVASPPPGSEGIPAGQMSSYIFNLKPGDKVTISGPFGEFFARDTQKEMVF IGGGAGMAPMRSHIFDQLKRLQNRDRKISFWYGARSKKEMFFVEDFDQLAEEFDNFEW HVALSDAMPEDDWKGYTGFIHNVLFEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLLD LGVDREDIMLDDFGG" gene 116446..117297 /locus_tag="RSK20926_00510" CDS 116446..117297 /locus_tag="RSK20926_00510" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00510" /translation="MSDENAVGETISLEGRLTRKDLRGLRPRGAIRQFHAGRGCLFDI KKARELCTWPSIQEVELWCDVTKAAFRELMSVRGLEELHVLNLRTHGGLQGMPLPASL STVGVGWATSGDLQQIARLTGLKSLRAENSGLSTRAVSALLEMDSLESLDLGASNLDD GLAETLSHSGSIQRLFIQGTRVTSSGLKRVCAMKQLRELDIWALRIEEKDLEMLSELP NLEYLSVGGYDNQTELTAEGVLPRIEKLPALKSIWLDGIRVPDADVSRLREKYEHVQV SFCDYSE" gene complement(117321..117770) /locus_tag="RSK20926_00515" CDS complement(117321..117770) /locus_tag="RSK20926_00515" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical transcriptional regulator" /protein_id="jcventer:1101232001804_RSK20926_00515" /db_xref="CDD:31711" /translation="MDEKDREILKLLQSNARLTADALSAEVGLSPPAVQKRLKRLRDT GVVEREIAVLSPTKLGREMTLIVEVVLERENCGHLETFKRRMREAPQVQQCYYATGEA DFILIVVTGDIKEYEAFTQEYLFDESNVARFTTSVVMDRVKVSLDII" gene complement(118004..119176) /locus_tag="RSK20926_00520" CDS complement(118004..119176) /locus_tag="RSK20926_00520" /note="COG0006 Xaa-Pro aminopeptidase" /codon_start=1 /transl_table=11 /product="metallopeptidase, family M24" /protein_id="jcventer:1101232001804_RSK20926_00520" /db_xref="CDD:30356" /translation="MRPDAPSRGFETAEFAARTEKAQSLMAATGLDGILLLSEPDVRY FSGFHTLFWQSPTRPWFLFLPASGKPIAVIPEIGAALMRQTWVEDIRTWSAPNPANDG ISLLTELLSPLAERGATLGIMKGHETGWRMPLGDWERLVSQLPGLQFGDATALVQGLR MVKSEAEVAKLRHICGIGSATFERVPEFVSAGMPLEEVFRAYRREALLQGADDVPYLV GGADQGGYEDVISPPSRRPLQQGDILMLDTGSTWDGYFCDFDRNWAIGTPDDLSRRAY DTLWRATEAGFAAARPGNSCSGLFQAMQGVIAEMDDQGGDIGRLGHGLGMQLTEQPSH AAFDQTELKEGMVLTLEPSLGYGQGRIMVHEENIVIRADGAEMLTKRAAPELPVLG" gene complement(119166..120359) /locus_tag="RSK20926_00525" CDS complement(119166..120359) /locus_tag="RSK20926_00525" /EC_number="4.3.1.15" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="diaminopropionate ammonia-lyase" /protein_id="jcventer:1101232001804_RSK20926_00525" /db_xref="CDD:31364" /translation="MSDLLPAAKLGHIAATRKEGDAAFRVLSVEDFANSRAEITQWEG YAPTPLVSLSALAAAIGVGEIHYKHEGPRFGLGSFKALGGSYAALRVLQRQISAKLGQ EVSLEDIRLGKYKDEAAKITLVSATDGNHGRSLAWGCQRFGAPCRIYIHAEVSEGRAE AMRELGAEVIRITGDYDESVVLAKTEAEENGWFVVSDTSWEGYSEPPRDVMAGYGVMT SEICNSLGTPPSHVFLQGGVGGLAAGVVAGLRQHWGKEGPRVVIVEPELAACLFESAR NGEATNFAIQEETLMAGLSCGEPSGMAWEVLSEEADDFLTMPESLVAPAVRLLARPLP GDEAIEAGESAIAGLAALIAARQDADLSAKLGLDANSRVLLIGSEGVTDPAIFAQIME GADAA" gene complement(120455..121594) /locus_tag="RSK20926_00530" CDS complement(120455..121594) /locus_tag="RSK20926_00530" /note="COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase" /codon_start=1 /transl_table=11 /product="amidohydrolase family protein" /protein_id="jcventer:1101232001804_RSK20926_00530" /db_xref="CDD:31662" /translation="MDELHQRLTQMRQAFHQDPELGFDEHRTKAKVARHLRGLGLEVH DEGCGVIGLLRAGSGNRAIGLRADMDALPITEASSHGYVSQNPGVMHACGHDGHMTML LGAAEKLAADPGFDGTVVFIFQPNEEHGLGAKAMIAEGVLERFPMEEVFAIHNLPGAP LGQVSTRPGLICSSESLFEITIHGQGGHASMPQVGVDAITVGAELVLALQTIVSRKLA PGAGAVVSVTEFLTDGQRNVLPGTATLKGDVRARAPEDREAVERFMRQIVQGVAATHG ISADMTFNTEFIETINAPEPTAAVAATARGMDLDTISNRTPMSFSEDFAHFCAAVPGC FMLLGNGEEGPQGQPLHSDDYDFNDALLPIGSDLWAALVRNRLPA" gene complement(121782..122633) /locus_tag="RSK20926_00535" CDS complement(121782..122633) /locus_tag="RSK20926_00535" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101232001804_RSK20926_00535" /db_xref="CDD:30928" /translation="MQMAAIETFLQIIEHGGFHAAARQLNLPQTTVSARIRTLEDALS NKLFERGASGSTLTRFGEEFRPFAQEMVSLWKIAATELPDRMTSRLSLRVGAQLSIWD PLLVDLAIALEQGFGKLVFALNFDHTLDMGEAVGNHILDLALSHEKSGDPRVSHQQLA PELLLPVATPPESGRAEDQLFINLDLGEHYRNAVQQRIPQQTGQNLFLGNCLMALRYM LKRGGQGLFPRYLVDPHLEEGRLILLPQSEPLSLPCYLISRKDSPAREQHQQVASCLS DLRSVSE" gene complement(122973..123143) /locus_tag="RSK20926_00540" CDS complement(122973..123143) /locus_tag="RSK20926_00540" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00540" /translation="MLIKAAAMNILKLTIKSGNFLESFIDRMSNMAFLIHLAHFHLPA APQLVNNSTTAA" gene 123193..125400 /locus_tag="RSK20926_00545" CDS 123193..125400 /locus_tag="RSK20926_00545" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein" /protein_id="jcventer:1101232001804_RSK20926_00545" /db_xref="CDD:31182" /translation="MSSLVSDRKAAIKQLMEGVDSDLMTLAASPATSEALEAFSKSWA GLGGNAEAALQKSYITDNPNETGSKHLMDRAPGSEAYHEDHYHYHSGLRTLIDTKGYY DAFLINLEGDIVYSVFKEMDYATNLMNGAYKDSGLGQVFRDAKRGKQGGVYFNDMKPY APSFGAAAAFVASPVYNLKGKLVGVAALQIPVAMLGQIVNNVEGLGETTQIYLVGSDH LARTTSRFEGGYQVLDQMPASEHIASAMDGNSHFFEAATGLAGNAAVAFTRPLDLGNA NWAIIAEQDVSEIMAPVNNKRNILVGVGIGVSILMSVAGMLFARSITGPVGRICEQMN AVSAGDLETEVTSASRGDEIGDIGKTLVSMQADLKQARIAEDARREDQKAQAKVVETL SAGLLRLSNGDFSEVIREAFPGEHEKLRADFNKTVETLSNTVSQVIDNASSISNGAAE ISQSSDDLSHRTESQAATLEETAAALEELTASVKSAAEGARSVENIMGEAKAEAENSG EVVQSAVAAMTEIEQSSSSIAQIISVIDDIAFQTNLLALNAGVEAARAGEAGKGFAVV ASEVRALAQRSSDAAMEIKTLIGDSSKQVERGVDLVGKAGEALHSIVERVSHISSLVT DIAEGAVEQSTGLGEINTGVTQLDQVTQQNAAMVEEATAAGHMLKTDAQNLTELVGRF RVKGGSVIAAPKPSQAASSTPSAHGEDDWAMEPAAAAATAVDGNAAQKMWDDF" gene complement(125460..126548) /locus_tag="RSK20926_00550" CDS complement(125460..126548) /locus_tag="RSK20926_00550" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101232001804_RSK20926_00550" /db_xref="CDD:47669" /translation="MSQSALLDLPLPLFTAALCFAVSVLLWHREIGHALASRVFAGLF FLFAVESLLVSLRFGYGYSELIVLQRLLPLFAGPLTYIGFALFAVSDRRASRLIGWHI SIATTLAILISVGSQILGSELSGLVDLLIALSYTAYLLLILRLHHQGADALIQARFDT ARLLRRWMLWAIFLLAGLLLLDSAIALSFALQDLHYAMGLMSVGSVILAALLILMLVK LPQSTRANRVSLSDQQTDTGEQGEAASLEQATRKLLLESQLYLDPELTVQRLARRLHV PERSLSTAINQSQGMNISQYVNGFRLEHAANLLRGSTLNIGEIARQSGFLTRSNFYRE FKRAYDQTPSDCRAKAQERGSSRPTKNR" gene 126679..127707 /locus_tag="RSK20926_00555" CDS 126679..127707 /locus_tag="RSK20926_00555" /note="COG4188 Predicted dienelactone hydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00555" /db_xref="CDD:33923" /translation="MKNLVLSAALTCAALVQALNAAPYQSGLSDLKIADAGAERPLEG FVWYPTQEVEGQEEQHSSIVWEGNMAIPDATPAEGDLPLLVLSHGMYGNAMNQGWLAA ALSRQGYVVATINHPGTSTWLRDAEQSRMLWERPRDISRVIDHFLAPSAEALRIDPDR IYMAGHSLGGFTAIALAGGRYDAAHSATFCAAHSSDLACGVFERWEIAKTAQDQRAME ADLTDPRIQGFAVFDLGGTQSFAPASLGLIEKPLLVYGAPRAAAGLNLETEARALAAM APNVTYREPSELAHFDFLGVCKPGAEEILAEENPGDEVVCYEGGDMRRSEQKKIAAEV LTFFESLR" gene complement(127790..129163) /locus_tag="RSK20926_00560" CDS complement(127790..129163) /locus_tag="RSK20926_00560" /EC_number="3.8.1.8" /note="COG0402 Cytosine deaminase and related metal-dependent hydrolases" /codon_start=1 /transl_table=11 /product="atrazine chlorohydrolase" /protein_id="jcventer:1101232001804_RSK20926_00560" /db_xref="CDD:30056" /translation="MMTALFAKRALLPGGWAENLRLEIECGHISTLAADGMAQPGDTQ VDTLLPALANLHSHAFQRAMAGMTEYRMAGRDSFWTWRDLMYRFTAQLSPEQIEAIAA LVYLEMQEAGYASVGEFHYLHHQKDGSAYDNLAEHSDRIMAAALETGIGLTHLPVLYS YAGVGEKPLESGQARFGNDMSRFCRLVDQAKAHAAGQLPADCRVGIAPHSLRATSPRD LEDVLQAHGEGPVHIHIAEQPKEVQEVLEGMSARPVEWLLENAPVDAHWCLIHATHMT DEETRNMAASGAVAGLCPVTEANLGDGPFNGATYLQAGGAFGVGSDSNVLISLTEELR TLEYSQRLRDLSRNVLVPGSEGSVGQTLYCGAAAGGAQALGRKSGRIETGQLADLVAI DSQDPALCALQPEQILDGLVFAAKDHVVTDLWSGGRHMVRDGSHIARDSILKQYRKAI EELVDSL" gene 129223..130455 /locus_tag="RSK20926_00565" CDS 129223..130455 /locus_tag="RSK20926_00565" /note="COG1228 Imidazolonepropionase and related amidohydrolases" /codon_start=1 /transl_table=11 /product="imidazolonepropionase" /protein_id="jcventer:1101232001804_RSK20926_00565" /db_xref="CDD:30039" /translation="MHIEEDQMQAENQVFTDLSAATMADGAAAYGLINAAAIAVSEGK IAWVGAEQDLPADYAAWTRHSLGGRLVTPALIDCHTHVVHGGHRAVEFEMRLNGASYE EVARAGGGIISTVKATRAASVEDLIAQALPRVDAMLAEGVSLIEVKSGYGLDRKTELN MLRAARALEEHRPIRVVTSFLGAHAVPVEYKDRPEAYIADLCIPVLKEAHAEGLVDAV DAFCEGIAFLPDQLVPLFDAARDLGLPVKLHAEQLSNLGGAKLATSYGALSADHIEYL DQAGVAAMAGAGTVAVILPGAFYTLRETQAPPIDLLREAGVPMALATDSNPGSAPMTS LLLTMNMGCTLFRMTPEEALRGVTAHAAQALGLKDCGRIAAGQRADLAVWNAEHPAEL AYRIGFNPLHARIFGGKL" gene 130452..132005 /locus_tag="RSK20926_00570" CDS 130452..132005 /locus_tag="RSK20926_00570" /note="COG2986 Histidine ammonia-lyase" /codon_start=1 /transl_table=11 /product="histidine ammonia-lyase" /protein_id="jcventer:1101232001804_RSK20926_00570" /db_xref="CDD:28771" /translation="MTTQSVTTLTLTPGAVSLADLERVFREECAVRLDTACRPAIEAA QARIAAAAAGEAAVYGVNTGFGKLASVKIAAEDTATLQRNLILSHCCGVGPAIPRAHA RLMMALKLLSLGRGASGVRLELIDLIEAMLEKGVTPVIPAQGSVGASGDLAPLSHMAA VMMGAGEAEFGGAVMTGGEALAKAGLEPVVLGPKEGLALINGTQFSTAFALAGLFGAW QAAQSALVTSALTTDAIMGSTAPLQPEIHSLRGHRGQIEAGSTMRALLAGSVIRESHR EDDTRVQDPYCIRCQPQVVGAAMDVLRQAATTLEIEANAATDNPLVLSEAGLIVSGGN FHAEPVGFAADMIALAVAEIGAIAQRRIALIVDPVLSHDLPPFLTPNPGLNSGYMIAE VTTAALMSENKHLANPCVTDSTPTSANQEDHVSMAAHGARRLAQMVENLERILGVELL CATQGVEFRAPLPTSETLQGVMARLRAVVPPLGDDRYTAPDIEAASTLIASGDIASGT GIGMPELGA" gene 132002..132805 /locus_tag="RSK20926_00575" CDS 132002..132805 /locus_tag="RSK20926_00575" /note="COG3741 N-formylglutamate amidohydrolase" /codon_start=1 /transl_table=11 /product="N-formylglutamate deformylase" /protein_id="jcventer:1101232001804_RSK20926_00575" /db_xref="CDD:33536" /translation="MIDPVEITRGDSPVVLGLPHTGTYVPEEVLARLNARGRGLDDTD WHIHQLYDGLLPGATTVRATFHRYVIDANRDPSGVSLYPGQNTTTLVPLTDFEGRDIW DVPPTESDIEARRAAFHAPYHAALEAELQRVNAKHGFAILYDCHSIRGQIPFLFEGVL PDFNTGTNMGATCDPLIEELVVSRCASAEGYTSVLNGRFKGGWTTRHYGRPAEGLHAI QMELAQSTYLTLEAAPWTYDSAKAVRLRAHLKDILESLAAWAPQTGGNS" gene 132802..134484 /locus_tag="RSK20926_00580" CDS 132802..134484 /locus_tag="RSK20926_00580" /EC_number="4.2.1.49" /note="COG2987 Urocanate hydratase" /codon_start=1 /transl_table=11 /product="urocanate hydratase" /protein_id="jcventer:1101232001804_RSK20926_00580" /db_xref="CDD:41237" /translation="MTDPRKNTRDIFPPTGPELNAKSWMTEAPLRMLMNNLHPDVAEN PHELVVYGGIGRAARTWKDFDLMVESLKDLEEDETLLVQSGKPVAIVKTHADAPRVLI ANSNLVPHWANWDHFNELDKKGLMMYGQMTAGSWIYIGTQGIVQGTYETFAEAGRQHY GGALTGKWILTGGLGGMGGAQPLAAVFAGACCLAVECNPDSIDFRLRTKYLDEKAESL DEALEMIERWTAAGEAKSVGLLGNAAEIFPEILRRAEAGGARPDIVTDQTSAHDPVNG YLPLGWTMGEWKERRESDPKGVDKAARASMKVQVDAMCKFHAMGIPTVDYGNNIRQMA LEEGLENAFDFPGFVPAYIRPLFCRGIGPFRWAALSGDPEDIAKTDAKMKELFPENTH LHNWLDMARERIAFQGLPARICWIGLGDRHKAGLAFNEMVRNGELKAPVVIGRDHLDS GSVASPNRETEAMMDGSDAVSDWPLLNALTNTASGATWVSLHHGGGVGMGFSQHSGVV ICADGTDAAAKRLERVLWNDPASGVWRHADAGYEIAKDCAREHGLRLPGILG" gene 134642..135331 /locus_tag="RSK20926_00585" CDS 134642..135331 /locus_tag="RSK20926_00585" /note="COG2188 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="histidine utilization repressor" /protein_id="jcventer:1101232001804_RSK20926_00585" /db_xref="CDD:32371" /translation="MKATFRDVKADIMRKISAGEWAPGALIPNEMDLAESYGCARATV NRAMRELADEGVIERRRKAGTRVRIAPVRQARFAIPVVRDEIEEQNGEYRYALISRSK DAAPGWLRARLQLPEGTPVLHLTCMHYADGNPYQYEDRWINLALLPQAEAADFATLGP NEWLVATVPFSDAEISFSAASADETLADCLSCTRGAALFTVERSTRLEGEAVTFVRQY FRPGHRMTTRY" gene 135703..136002 /locus_tag="RSK20926_00590" CDS 135703..136002 /locus_tag="RSK20926_00590" /note="COG0644 Dehydrogenases (flavoproteins)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00590" /translation="MQNLFLILGAAAVVLCSPVLLLAAQSRPSEGEVALVIAPPWGES AAVIAAKNGLLEVTPERAPMGALVLLQSPHSIDQLYNQGAWLVVDGKRVLELCAN" gene 135990..137564 /locus_tag="RSK20926_00595" CDS 135990..137564 /locus_tag="RSK20926_00595" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein McpI" /protein_id="jcventer:1101232001804_RSK20926_00595" /db_xref="CDD:47612" /translation="MRKLMTSALPKTGSLGTDATERRIQQISSWILVPLPALAAYFLN DGAGWWLFATLGLTLGALAFLSQKLADSTRDYLLSFCFIGHCILFTASLSGHAWQLDA HMLFFAALAIVSTLANANALLFATVLVALHHISFSFLLPTLVYPSGGLAENLQRTVLH AGIVLLESGVLLISLRKSAAADAALKQQQKAAQEQAEAAARAEAEATQNKKDAERVVG IVGDHLCDLADGRLDSRIDEEFPAEYRLLQKNFNATVDTLKETIDQVLDATHSINSGA TEISQASEDLSNRTESQAATLEQTAAALEELTVSVKSAAEGAKSVEATMGEARDEAVN SGQIVRDAVSAMGEIENSATQIARIISVIDDIAFQTNLLALNAGVEAARAGEAGRGFA VVASEVRGLAQRSSDAATEIKTLIHESSEHVEQGVDLVGKAGDAIESIVERVNQISGL VSNIAKGAAEQSIGLSEINTGVGQLDHVTQQNAAMVEEANSAGHMLHSDAQKLAELVG HFSSESSAHAISAAAA" gene 138203..138271 /locus_tag="RSK20926_00600" CDS 138203..138271 /locus_tag="RSK20926_00600" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00600" /translation="MTLLRDLAIGMGLLLAEGPAAA" gene 138448..138771 /locus_tag="RSK20926_00605" CDS 138448..138771 /locus_tag="RSK20926_00605" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00605" /translation="MTPQKERLGGHDVKFGPEPGTAIVADGLRIDLDNGTTWQMTDRQ CLLWADCSLEAEAPAQLLEAKLQGGSFHFEFADSRGRHFNLQWPLEGFAEAFATYEAE WQRRQ" gene complement(138854..139258) /locus_tag="RSK20926_00610" CDS complement(138854..139258) /locus_tag="RSK20926_00610" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00610" /translation="MLRFNPINFARPVNGTPSLAVIAKGAQIKGIFKLVAAAAVSFAA ATAAVADTGLMTKFDDIQWTPIEGTPMSLSNLWGDRDSWPCAMYLKMPDGFAVPDHAN TYAFHGDACISVEDCVLFIFQDGKGDAIFHSE" gene 139312..139869 /locus_tag="RSK20926_00615" CDS 139312..139869 /locus_tag="RSK20926_00615" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="Transcriptional Regulator, LysR family protein" /protein_id="jcventer:1101232001804_RSK20926_00615" /db_xref="CDD:30928" /translation="MKLTSDDLMVVLALCCEGTLERAGLFPDRDVSSVFRAIKRIETK VGAPLFSRSKTGFEPFPAAAELAERGREISESLSHADRICSGLEEQLTGRLRITTTDV LLEHFILPNLAQFRREVPQIEIEFSTSNQFAKLWERGFDLAVRPSSNPPGQLLGQFLT RLGFVAVGGPGYMAADRGSGLADPG" gene 139949..140152 /locus_tag="RSK20926_00620" CDS 139949..140152 /locus_tag="RSK20926_00620" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00620" /db_xref="CDD:43392" /translation="MNLMIKAVREDLGVSLLPDLPALTEGLHKIEGLEVTETSEIWCL YHSSNRGNPLIQAFVKFMKRAMA" gene complement(140202..140570) /locus_tag="RSK20926_00625" CDS complement(140202..140570) /locus_tag="RSK20926_00625" /note="COG1733 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="Predicted transcriptional regulator" /protein_id="jcventer:1101232001804_RSK20926_00625" /db_xref="CDD:31919" /translation="MGFSHMLDIKPDPYIALCPSRQIIAVIGDKWSLLVIPLLLEGPM RNAELMRAIEGISQKMLTQTLKRLEEYNLVIRQDYGEVPPRVDYRLSPLGLSLAQVIG TLDNWVIENFDAMTQTQKQA" gene complement(140492..140773) /locus_tag="RSK20926_00630" CDS complement(140492..140773) /locus_tag="RSK20926_00630" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00630" /translation="MVAAAAAAAVPKTCLRVSDVIIDLLAILSQANPDDAGSAAELHP WLASIESEDKIKGTTEEVRTFWFLWDFHICLISSLTPISLSARRARSSL" gene 140709..141677 /locus_tag="RSK20926_00635" CDS 140709..141677 /locus_tag="RSK20926_00635" /note="COG0491 Zn-dependent hydrolases, including glyoxylases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00635" /db_xref="CDD:40833" /translation="MMTSLTRRQVFGTAAAAAAATTLSGAASAKAPRATGQAPGFYRR KVGEAQVTALLDGYIDVAHGFWTGIEQATVEELAAAAGLPDNGSIRIGVTSYLINQGD RLVLVDTGSADLFGPTAGKFLSALAAAGHTPDQVDDILITHMHPDHIGALLENGAAVF PNAQIHVARLEFDHWTSTTAQSNAPDFARPWFDAALGVKAAYDGRLNVFSGAPEVLPG LTAVPLHGHTPGHSGYRLSSRGEDLLIWGDACGIASVQFEHPEAGLAFDVDGATGKAT RAKLLDMAAGEGVLVASAHLPFPSFGRVLRAGEAYAWQPGEYRFEV" gene 141758..142684 /locus_tag="RSK20926_00640" CDS 141758..142684 /locus_tag="RSK20926_00640" /note="COG0435 Predicted glutathione S-transferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101232001804_RSK20926_00640" /db_xref="CDD:30784" /translation="MMSSIPRRGLCQGQWHADLNTMPDRNSDFQQSFKTPAARVEIDI DRLRQRPESYQLYAAKACPFAHRVLMMLALLPDAKIGVTHCAPWLGHPQGWTFEAGAT SPIGGQYLWQVYTASDPAYSGRVTVPVLWDCDAQAIASAESLDIIQALAIAFGPHLIP NETGFAELCDWIHDALNVGVYKVGFATTQQDYDAAIAALEDTLQQVSTLVCDGYAYGD SPTLADLMIFATGIRFDVAYQGAFQIQHRRWSDDSSLSAHLKRVAQLEGIAETVAVDD YRRHYFDEIGFPIRHTMDDGHYIIPFTPDPFA" gene complement(142753..143238) /locus_tag="RSK20926_00645" CDS complement(142753..143238) /locus_tag="RSK20926_00645" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family protein" /protein_id="jcventer:1101232001804_RSK20926_00645" /db_xref="CDD:31711" /translation="MADYANEEQRMDQIDRQILRTLQSEGRITNQDLAEKVGLSPSPC LRRLRNLETTGAIKSYSADVDPVAYGLPIVAFVNVRLEHHNGDAVQHFERKIALFDEV LECFMLTGGTDYFLKVMVSGLGAYEDFIRNKLHSIGGVGSIDSSFVYGVVKKTSVFPM L" gene 143323..144522 /locus_tag="RSK20926_00650" CDS 143323..144522 /locus_tag="RSK20926_00650" /EC_number="4.4.1.11" /note="COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases" /codon_start=1 /transl_table=11 /product="methionine gamma-lyase" /protein_id="jcventer:1101232001804_RSK20926_00650" /db_xref="CDD:30971" /translation="MTTSQGFATRAIHHGYDPQENEGALTPPIHMTSTFAFESAEAGG AMFAGEASGHFYSRISNPTLDLLEQRMATLEGAEAGLGTASGMGAITSTLWSLVRAGD EVIIDKTLYGCTFAFLTHGLTRFDVSVRPVDMTDPSNLEEVISDRTRVVYFETPANPN NRLVDIAAISKIAHRAGAKVVVDNTYATPVQTRPIEHGADIVVHSATKYLGGHGDLIA GIVVGSAEDITNIRLVGLKDMTGAVMAPMTAMLVMRGLKTLQLRVERHCKSALEVAQA LEAHPAVAKVYYPGLASFEQGDLARRQMANFGGMIPFEVVGGKEGGIAFMNRLSMIQR AVSLGDAESLIQHPASMTHSTYTPEERAKHGIGEGLLRLSVGLEDVDDILSDLMRALG QHNSAAA" gene 144539..145900 /locus_tag="RSK20926_00655" CDS 144539.