LOCUS RTM1035 4212272 bp DNA linear CON 26-JUL-2006 DEFINITION Roseovarius sp. TM1035. ACCESSION VERSION KEYWORDS . SOURCE Roseovarius sp. TM1035 ORGANISM Roseovarius sp. TM1035 Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius. REFERENCE 1 (bases 1 to 4212272) AUTHORS Belas,R., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M. and Venter,J.C. TITLE Direct Submission JOURNAL Submitted (25-JUL-2006) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..4212272 /organism="Roseovarius sp. TM1035" /mol_type="genomic DNA" /strain="TM1035" /db_xref="taxon:391613" gene <1..706 /locus_tag="RTM1035_00005" CDS <1..706 /locus_tag="RTM1035_00005" /note="COG1651 Protein-disulfide isomerase" /codon_start=2 /transl_table=11 /product="DSBA oxidoreductase" /protein_id="jcventer:1101493006644_RTM1035_00005" /db_xref="CDD:48572" /translation="DDRGAVGHFTEGKTNMNRRGLVLSVLAVGAAGFGGAAWYATRPQ PIAEAVPVAPEVNDVLIRPYSPILGPETAPVTIVEFFDPACEACRAFYPVVKDIMTEH GDAVRVVIRYTAFHGDASVEAIRVLEAARMQHVFEPVLEAVLREQPRWASHGTPAPGL ILEIAASGGLDVEAARTQMLAPGVVAVLNQDRADVEAVGVRQTPTFFVNAKPLDPFGE AELRRLVAAEVAASQS" gene 735..1202 /locus_tag="RTM1035_00010" CDS 735..1202 /locus_tag="RTM1035_00010" /note="COG2847 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00010" /db_xref="CDD:32675" /translation="MTKLSYINGLTLVLLLSGMSTPAFAGSEDVVVENAWSRASIGVN RPGAAYMTVRNTGEDTVTLTGLTTPLAVMPQIHETKTNADGVSSMAPADEITIEPGQS VALEPGGLHAMLMKLQNPMIEGETFPLTLTFSDGGEVTVEVPILGIAARGPES" gene 1340..1828 /locus_tag="RTM1035_00015" CDS 1340..1828 /locus_tag="RTM1035_00015" /note="COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems" /codon_start=1 /transl_table=11 /product="SCO1/2 family protein" /protein_id="jcventer:1101493006644_RTM1035_00015" /db_xref="CDD:48517" /translation="MDFRLTDHEGNEVGPEALIGRPTMVFFGFTYCPDVCPTTLSDIS GWLEDLGDDAARMNVVFITVDPERDTAEAMAEYVGYFHPAIRGWTGPEDQISRAVEAF RASYERVPTEGGDYTMNHTASVFLFDAKGELVTMIDYHEPREFAVPKIRRALTEDVEG AT" gene 1825..3198 /locus_tag="RTM1035_00020" CDS 1825..3198 /locus_tag="RTM1035_00020" /note="COG0739 Membrane proteins related to metalloendopeptidases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00020" /db_xref="CDD:31082" /translation="MNIRIVLASAVVAGAFSVTAIAISGVLSKEPVPPAIAEATLWTP DPLSMPQIADYDVTTPAAFHADNASPMRPLPLLQSVFAETALPEIEPPLITWSREIAS GETLDAVLANAGIAAPARAEIALALGAEYDLRRLRPGHEITVISKVDGNPSRVELAVD DGVRIETVFGQELVTRVLEPDPEMVTFAGEAVIESSVFAALDKAGIPARFAVDMAQML GGTVDFRRELSGGETMRLLWREARDGNERIGQPELAFAALNLGETVYEIVWPDDGSGK ATIYVDGEVLRVFAQPVEGARLSSVFGRRTHPVYGNVRMHTGVDFAAASGTPVKATAP GRVSFIGRRGGYGRVVEIAHGSDTLTRYAHLSEVPDTLEQGQRVMAGDMIGRVGATGT ATGPNLHYEVLVDGRPTDPLSDDRLAEAAERDADDTAALERLAEARTLLAERLTSEFM QTTTERL" gene 3202..3660 /locus_tag="RTM1035_00025" CDS 3202..3660 /locus_tag="RTM1035_00025" /note="COG3019 Predicted metal-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00025" /db_xref="CDD:32836" /translation="MKRLALALAVTLALFPAAQAVADAIQIDVRKTNGCGCCLSWMKH LEESGFAPTGEDMFGGSLVRFKLDNGVPQRMVSCHTALVDGYVIEGHVPASDIQRLLD ERPDAVGLAVPGMPYGSPGMGPEDDREAYEVFLIRGDGSTEIFSSYSAAD" gene 3683..4468 /locus_tag="RTM1035_00030" CDS 3683..4468 /locus_tag="RTM1035_00030" /note="COG0428 Predicted divalent heavy-metal cations transporter" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00030" /db_xref="CDD:30777" /translation="MEPFSPITLGFLGSLAAGSLTAVGAIPVLFGRIPSRATRDLLLG FAAGVMLAASFFSLIIPALDAAEGQFDNGALPAAIVCVAILLGMGAVALMNEWLPHEH FKTGREGPDAASLRRVWLFIIAITIHNFPEGLAVGVGFGADGLSGGLPLAIGIGLQNA PEGLAVAVSLLGEGYSRRRAWGIAALTGLVEPVGGLLGAGIISISQPLLPWGLAFAAG AMLYVISHEIIPETHRSGHQNRATLGLAAGLVIMLFLDVWLGG" gene 4449..4943 /locus_tag="RTM1035_00035" CDS 4449..4943 /locus_tag="RTM1035_00035" /note="COG0597 Lipoprotein signal peptidase" /codon_start=1 /transl_table=11 /product="putative lipoprotein signal peptidase" /protein_id="jcventer:1101493006644_RTM1035_00035" /db_xref="CDD:30942" /translation="MYGWEDEMKLTHFQGFIAAGTAFLVDQVTKAIVVANAADLSAGI PVFPGFNLIYLRNDGVTFGLLGGAPWWSLTALALAVCGWLTVMLVRTANPVEAIAYGA IIGGALGNVLDRIRFRSVTDFLDFYVGSTHWPAFNMADVFVVSGVGLLLIAPWLSAKL KTGT" gene 5147..6511 /gene="lnt" /locus_tag="RTM1035_00040" CDS 5147..6511 /gene="lnt" /locus_tag="RTM1035_00040" /EC_number="2.3.1.-" /note="COG0815 Apolipoprotein N-acyltransferase" /codon_start=1 /transl_table=11 /product="apolipoprotein N-acyltransferase" /protein_id="jcventer:1101493006644_RTM1035_00040" /db_xref="CDD:31157" /translation="MGQFGFGVSWIAESFYVDSERFGALAIPAVAGLSAGLAIFPAIA AMLFATIMQRRAVGDTTAGLLLATCWVAAEWLRGHVLTGFPWNLAAYALVEHAALRQP AAWVGSYGLSFLTVFIGLLPGVLIVAAPNRRVPVLVLFAVVVMGLWGGGALRLGTNVP PTDSALRIVQGNVPQVEKWAPGSRERTLEKYLGLSAQPGRFDLLLWPETAFPGFLDED ALARRRLSTVLPDGRILLTGVPDRVEGDGGTRYFNTVQAYDGSGEILTGYAKHHLVPF GEYVPLRGWLPIERLTEGLGDFTPGPGPRTLAIPGAPLVAVAICYEIIFPGQVVDDLF RPDWIFNATNDAWFGTSIGPEQHLASARMRAVEEGLPVVRAANTGISAIIDAKGEIIA RLETGQTGVIDASLPTALAPTPYARFGDWTSLALICAVWALAFTVGLVRRRFNSEKSK SEES" gene 6511..6678 /locus_tag="RTM1035_00045" CDS 6511..6678 /locus_tag="RTM1035_00045" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00045" /translation="MLVLAGFVGGALWGGYLAQRRKGNRLDILQYATSFGIAFGLLAF FASVILLRITS" gene 6703..8640 /locus_tag="RTM1035_00050" CDS 6703..8640 /locus_tag="RTM1035_00050" /note="COG2366 Protein related to penicillin acylase" /codon_start=1 /transl_table=11 /product="putative penicillin acylase (penicillin amidase)" /protein_id="jcventer:1101493006644_RTM1035_00050" /db_xref="CDD:41830" /translation="MKRLFNILLYLLLAVFALGLTVSGVVYFLLRASVPDYDEDFSVA GIEGPVDILRDAAAIPHISADSAPDAYFALGFVHAQDRLGQLLRARRAAQALMPLDRT IEVEPSTAQALDAYAAGVNAWLGLVSEGGRGRGSPDLLIADERMIAAWRPVDSLRLAQ AFLNDLQPERRQNDLSGLSDLPIPSDRPLLPELFVTSPKVSLDAWALPGDRTATGAPI LAADIRGPLSLPSEWYLADIQLPTGAAIGATLPGVPFIVVGRSERVAWAFRSVSQKAV KEPENPTAAQASNFLMMLDRLARSADVNDAMDACMNLSPAGLEILAIDRETLARWPDR EVETPLSFRDARLAALDERQPIFSVEGAITVQRDTVSAAARALLPIMAKELWFVGSTG ALEENRADELRGDILDQLAQWNGDMDRFSPEPLVFWAWARALQKRILQDEFPSATKVW ARPNPDVLFAVLSDRGGSAIWCDIRPSTRIETCQDQVRAALDDAIGWLVDRYGPDPSA WAWGEAHALNMGWAPIRSSGIISDLLSLEAPSSGDPDTLIATLFTSDNDRPFATSAGT NFQAVMSFSEEAGSYFIAPAGQSGHPLSRFYENLFPMWMQGKYLPMSTDLSLAQGGAV GTSRLSPVSVDGPAIQHDRSQ" gene 9003..9629 /locus_tag="RTM1035_00055" CDS 9003..9629 /locus_tag="RTM1035_00055" /note="COG3336 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="jcventer:1101493006644_RTM1035_00055" /db_xref="CDD:33145" /translation="MGLLAHPVTATAALITSLFIWQIPVLYGLAQRIAAIEVFAHFAM VLAGIWYFGMLFDPRDPPEGARRGARLISGFAVIVSNIFLGSLTTLKEVSLYASYQTA GTGLLDPLSDETMGGYTIWVPSSMLMIAAIILVMNGWNAAEVRRWNSRYELVRGSNSA ALEFPETAEELRLKVAKPNRDMGRTLAIGALVMFFIVMTTVVTIVYAL" gene complement(9867..10337) /locus_tag="RTM1035_00060" CDS complement(9867..10337) /locus_tag="RTM1035_00060" /note="COG1321 Mn-dependent transcriptional regulator" /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional regulator of mntH" /protein_id="jcventer:1101493006644_RTM1035_00060" /db_xref="CDD:31512" /translation="MTKLQSQEHEPFETVDRAPEAQAEGFATVRQAHESEMAEDYVEL IAELIESRGEARPVEIAERFGVKPPTVTKNISRLKAAGLVRREPYRAIFLTDAGRELA EACRRRHRIVVAFLLSLGIDEETAERDAEGIEHHVSTTTLEAFEHALLQSESGK" gene 10432..12312 /locus_tag="RTM1035_00065" CDS 10432..12312 /locus_tag="RTM1035_00065" /note="COG1858 Cytochrome c peroxidase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00065" /db_xref="CDD:32043" /translation="MIQKFLGAFIVALASALVLSGPVAATPAKEAPWLPEAAAYRLTL FLGNLEPLPWDDVGTAWAEPYRGSEFSVGALAWLDGNSDIGPAPLLDAITREDRQAVF AEATRLIARRIDEELDRAVMADDPARAQQAVRTARELYRSFADGIAAADPDASRRIGL AWLELNSSTGSAGVLGAGATPASRKTMEAAREVISLYLAENYLVDDFAPRRTLSALPE TVVLSGRTIEVPPSLPPGSDIFDQDPLPRLVLNFEEQGIDETDLPLVAYGDMLFDSAQ IFGNPAQGLGVACSTCHNRSDVNQRLFIPGASHQPGAIDVDGAFFNPIFNDRRDDPID IPSLRGLRFTGPYGRDGRFASLRDFTRNVIVNEFGGDEPTPFMLDALLAYMLEFDFLP NSMLTPDGQLTEAAPEAAQRGEAIFNTPFAALGDRSCSSCHVPDTNFLDRQAHDIGSV ALAYDGARTGAMDTPTLLGTVYTAPYFHDGSLPTLAAVVDWFDESKALGLTGAERADL TAYLETVGAADEPYEAFDAENTAFRLAFSELTTFASTLDTLLPQRDAKHILLLTDTVA ADLSADASTMSNLAARPEVYALAQRLAEVGDAVRTDDWVAAETSWTAFKSEADAIEER AF" gene 12312..13187 /locus_tag="RTM1035_00070" CDS 12312..13187 /locus_tag="RTM1035_00070" /note="COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="phosphonate ABC transport phosphonate binding component" /protein_id="jcventer:1101493006644_RTM1035_00070" /db_xref="CDD:33034" /translation="MAIHMNRRTMLALAAAGAVSLATPLAAQDTALRLAFIPQENPEK LLGDIEAITGWLASEIDVPVEGFVTIDHAAAVEALRNGDADISFMGALPFVLAEAEIG AVPLLSEVYRDAPSYTGRIFVRRDSGIAGLADLRGRDIAFADPISESGYLYPLAEFVE AGLIDGPGAAEAFFGRVFFAGGYQQAMQAMAEGLVDAAGASQYADLLLTPQQQAQVTW IAESPPIPSHVVIARPGLDAEVQDRFTNAMLQLNEPENRDKLRYLYGPDGYVRADSAA YGGVRDMARRYGLLE" gene 13184..13966 /locus_tag="RTM1035_00075" CDS 13184..13966 /locus_tag="RTM1035_00075" /note="COG3638 ABC-type phosphate/phosphonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC phosphate/phosphonate transport system ATPase" /protein_id="jcventer:1101493006644_RTM1035_00075" /db_xref="CDD:48289" /translation="MNIAIRIDDLNFAHPGGSVPALERVSLTISTGESVALLGPSGAG KTTLLALLDGRLQGWRGRVSVLGAPLDPDQPPPRASRPDTGFVFQEFALVERSTVLRN VLNGRLGRMAPLRALLGSPTPHDLDIARTALTDCGIADLAERRVDSLSGGQRQRVAIA RCLAQEPRLILADEPVSNLDPTRAGEVLALLTGAAQARGATALFSSHQPDLARRFAQR IIGMRDGRIAFDVPTSELNDDATAELYREVEPIPGIGLRAVS" gene 13966..14724 /locus_tag="RTM1035_00080" CDS 13966..14724 /locus_tag="RTM1035_00080" /note="COG3639 ABC-type phosphate/phosphonate transport system, permease component" /codon_start=1 /transl_table=11 /product="PhnE, subunit of alkylphosphonate ABC transporter" /protein_id="jcventer:1101493006644_RTM1035_00080" /db_xref="CDD:33437" /translation="MAFRGFGGFATSGLIAAAIVWSFATTDVELSRLMSAGPRIADFL GRMVPPDPTVMAEIRKGSAETLRIAILGTLGAVILSVPLGILASETMVSRAVFRPIRT LLAFIRAIPLILVAMLMVGAVGLGPLPGIIAVAFHATGMLAKFYAEAIDGVPRAPIAA LESAGAGPLVRLRHAIWPQMAPVVARDTIFRFELNLRESLILGIVGAGGIGFYIQTYV RSFQYDKAASVTIAVVVMVIAIEAINVTLRRRFT" gene complement(14728..15204) /locus_tag="RTM1035_00085" CDS complement(14728..15204) /locus_tag="RTM1035_00085" /note="COG3034 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG" /protein_id="jcventer:1101493006644_RTM1035_00085" /db_xref="CDD:32849" /translation="MGGFAAFLSGCASKFRSYNGPEVTRLRMYKGQRLLVLDGADDVL RTYPIGLGFAPEGHKQFEGDGRTPEGSYEIDRRNPDSLFHLSIGISYPNEADIAFAEA QGKSPGGDIFVHGGPRKGIDPMNVRDWTAGCIAVTDRQIEEIYAMVRDGTPIDIYA" gene complement(15304..17472) /locus_tag="RTM1035_00090" CDS complement(15304..17472) /locus_tag="RTM1035_00090" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="Cation transport ATPase" /protein_id="jcventer:1101493006644_RTM1035_00090" /db_xref="CDD:32399" /translation="MVGPKVGGTEHLAFDVINGRMTILDTAVGISDNEVSQLVASTGM STKPWDADNAAEDQAAHLARQKRFTSLSGGFWAAGFLFHIVETGMGGALGLFAGHGEV PMPMAEAGIFAVAILFGVWLVAPKAWSSARRLSPDMNLLMVVAVAGAIGLGEFFEAAT VAFFFSLSLYLESWSVGRARNAVSSLLDLAPPTARVLYDDGSEADVPAAAVAVNARFI VRGGDRIPLDGEVVDGAGAVDQAPITGESALVPKEPGDEVYAGTINGEGTLTVRATKA ASDTVLAKIIRMVGDAHARRAPVEQWVAKFARIYTPIVMALAIAIALVPPLLLGGAWD YWFYNALVLLVIACPCALVISTPVSIVAALTASARAGVLIKGGAYVEAPGRTTALAMD KTGTITMGEPEVAAVHPLVGVSARDLMALAASLEARSSHPLARAILSRAEADGVSVSA AEDTRTVPGRGLEGRADGRAIWLGSDRFAEEKGFGNAIPADLRDRIEGAGSTLVAVGD ETGVTGVLELRDRIRPDAKGIVARLHAQGVKTIVMLTGDNERTARAVAAEVGIDEVRA DLLPEDKVTAIEELVATHDMVAMIGDGVNDAPAMARAHYAIAMGAVGSDAAIETADIA LMTDDLARVPWLIAHSRRTMTIIHQNIGISLATKALFVGLTAFGMASMWGAIAADVGV SLLVVANALRLLNGHRIKDGPSGGEPVGEQMAKGALAHGH" gene 17870..18139 /locus_tag="RTM1035_00095" CDS 17870..18139 /locus_tag="RTM1035_00095" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00095" /translation="MLQKYAVIMVATLALAGCAVPSKEDNDPFRIGNVPESVAALAAP DQDLITARLRPEDNCYWYAHSGPVETTLVPLRSAGGNPICVARQS" gene complement(18179..18844) /locus_tag="RTM1035_00100" CDS complement(18179..18844) /locus_tag="RTM1035_00100" /note="COG1376 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="Twin-arginine translocation pathway signal" /protein_id="jcventer:1101493006644_RTM1035_00100" /db_xref="CDD:31566" /translation="MLTRRHFIQTTAALFSASISSPLLADTWPTEAEKAAWDAQITPP GYNPATSNPWGLHPRFLPQRVITKDGLVAGDIHVDAVARYLYHIEEGGTAMRYGVAIA RGKLYEPGVYTIKRKVRWPHWQPTQNMIDRDPELYADIADGMEPGPENALGSRALYLY VGDRDTYLRIHGTPQPRSIGGRASSGCVRMVMAHINDLYPNVEIGSTAFLYSAEDSVT PQS" gene complement(19280..19630) /locus_tag="RTM1035_00105" CDS complement(19280..19630) /locus_tag="RTM1035_00105" /note="COG0640 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, ArsR family protein" /protein_id="jcventer:1101493006644_RTM1035_00105" /db_xref="CDD:47725" /translation="MMQVFADRNAAAAGIERRAKLFRGLADPSRLAILGVLCEGPLVV HEIVKRTGLSQPNVSNHLRCLLDCGLVASDRDGRFIRYRISSPRIAALLNDVDALLDV VAEGVGACDNYREA" gene 19753..20541 /locus_tag="RTM1035_00110" CDS 19753..20541 /locus_tag="RTM1035_00110" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00110" /db_xref="CDD:31423" /translation="MDCAKDAAQIERAAQSAGVAPDAVKVSAATHIMTLKVPEASLPE IEKAVETTGYGFDRIESDEDLQQSAAHQDPGYRRALWIVVILNVGYGVLEMIGGFIAG SQAVKADALDFIGDGAITFLGLLAIGWSLLWRARSALIQGIFLGLLGLGVFSTTIIRA FEPTTPDATLMGILGLIALVINVISVLPLLRYRKGDANMRAVWLFSRNDAIGNAAVVI AAGLVVWLGSAWPDLIVAFGIAGLFLHSSWAIIRDARADLKAVA" gene 20493..21047 /locus_tag="RTM1035_00115" CDS 20493..21047 /locus_tag="RTM1035_00115" /note="COG0597 Lipoprotein signal peptidase" /codon_start=1 /transl_table=11 /product="Peptidase A8, signal peptidase II" /protein_id="jcventer:1101493006644_RTM1035_00115" /db_xref="CDD:30942" /translation="MGDHPRRAGRSEGGGMNSRVLGGLCAIAAFGVDQGTKALALNSP ALENGVEVLPFLNLVRVLNDGVSFGMLGGVVPWWGLVALAAVVVAWLLIWLWKAPDGL TGAALGLIIGGALGNILDRLRYQAVPDFLDFHYGSYHWPSFNLADVAIFCGAALLFWD SFRTSKVRPENREQDNRKGDVTGG" gene 21094..21606 /locus_tag="RTM1035_00120" CDS 21094..21606 /locus_tag="RTM1035_00120" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="conserved hypothetical permease protein" /protein_id="jcventer:1101493006644_RTM1035_00120" /db_xref="CDD:34283" /translation="MDWIDRGIRGIGVVTAWLTVVSIAAYGALQMLDRKLQLGVSSYL PDLSTSLLFILIFLTFGYTYLRDGHVRVDVLRRHWSARRIAWIELIGGLFVLLPLAAI LTYYGWDGLMRTTKYAETQLWAQRIAGVIGPILLALAGMIVALRNIAFLTGRRAQGAP EQASGLHNGE" gene 21599..22858 /locus_tag="RTM1035_00125" CDS 21599..22858 /locus_tag="RTM1035_00125" /note="COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component" /codon_start=1 /transl_table=11 /product="putative C4-dicarboxylate transporter family protein, DctM subunit" /protein_id="jcventer:1101493006644_RTM1035_00125" /db_xref="CDD:34282" /translation="MNEVLTVAMLVVMAIGVFSGFPVALVLAGTGFLGFVAAVWVGIT DFQHLGLIYLRARGVLTNESVQFTSVPMLIFLGLILNASGIAETMFRLLGRLLTGVPG RYAIATLLIGLVLAPAAGVIGASVITVALVAYAPMMASGYAPRTAGGAVAASGALGVV FPPAVMLFFISNVFYLRIGLMYVALIVPVLLMVMAFAVYFAVTLRKTVEIPLDTPKTN LVSDLLFVLASVAVIASIPLSIILGFATLTEAAGVGVFGALLVALARKRLSFSSLNSV TVQTSTMTSMVYFIVLGASVFSLSFHLVGGPDVIFEWISAFDLTRWELLAILLGVIII LGFVFDWIEVLLVFVPVLMPIFSELDFADHVGSAYFAQIWIAGLIALALQTSFLTPPF GYALFFAKMAAPNRLLKKSALDAVMRT" gene 22896..24074 /locus_tag="RTM1035_00130" CDS 22896..24074 /locus_tag="RTM1035_00130" /note="COG3666 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase, IS4" /protein_id="jcventer:1101493006644_RTM1035_00130" /db_xref="CDD:33464" /translation="MRGTDEASGSLFSYVDLEQRVPDRHPLRLIRRVVNDALASLDAE FAALYTDFGRPSIAPERLIRASLLQLLFSIRSERQLMEQMNYNLLFRWFVGLGIDDPV WVPTVFTKNRDRLLTTDMSRKLMAAILAHPEVRPLLSDEHFSVDGTLVKAWASMKSFQ PRNSAPPPHDDDPGGPPPPADATFANTEPQPQQTETQPMPDTPRHIRNAAVNFRGQKR SNATHISVTDPDARLYKKAPGAAATLCFMGHTLMENRNGLIVQADLTHADGYGERKAA LEMINRHSPGSTRRLTLGADKGYDSANFVAALRRMVVTPHVAQKARSSAIDGRTTQHP GYALSQRRRKKIEEPFGWAKTVGGMAQTVHRGLDRVRAQFTMTMAACNLARLPKLLAP " gene 24294..24851 /locus_tag="RTM1035_00135" CDS 24294..24851 /locus_tag="RTM1035_00135" /note="COG3547 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase, ISlxx2" /protein_id="jcventer:1101493006644_RTM1035_00135" /db_xref="CDD:42350" /translation="MQLIRTLAAWRPDLTGFRDVEESYKIALKSLARRYLELHDEVAD LDDMIEAIVTDLARYLIACSGIGFTSAAQLLLTAGDNPERLRSEASFAALCGVSSVPA SSGKTTRHRLNRSGDRAANSALHIIAIGRLRLDSKTKEYVARRIAQGHSKLEAIRCLK RYIAREVFNIIARRHKQINQAQIAA" gene 24904..25164 /locus_tag="RTM1035_00140" CDS 24904..25164 /locus_tag="RTM1035_00140" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="putative transposase protein" /protein_id="jcventer:1101493006644_RTM1035_00140" /db_xref="CDD:40748" /translation="MLAAREIKISMDGKGAWRDNVFVERLWRTIKYEEVHLRAYASVS EARAGIGRYLAFYNSRRPNSSLDGKTPDQAYFNQPMPEAVAA" gene 25317..25523 /locus_tag="RTM1035_00145" CDS 25317..25523 /locus_tag="RTM1035_00145" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="jcventer:1101493006644_RTM1035_00145" /translation="MRSLLYEAATVILTRSLADSDLRTWGLKLKGRIGFKRAAVVVAR KLAVIMHAMLRDDTPFVRVAKAAT" gene 26269..26463 /locus_tag="RTM1035_00150" CDS 26269..26463 /locus_tag="RTM1035_00150" /note="COG5659 FOG: Transposase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00150" /translation="MACEMTEKLLGEGAPSAFVLTHVVYSSDYGFPHMLEDRGQPYAL AVRSTHNLHFLEERRWYRQT" gene 26959..27459 /locus_tag="RTM1035_00155" CDS 26959..27459 /locus_tag="RTM1035_00155" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="Tripartite ATP-independent periplasmic transporter, DctQ component" /protein_id="jcventer:1101493006644_RTM1035_00155" /db_xref="CDD:34283" /translation="MIIRAIDGLNETVGRIVSVVAIVFAAFIIYDVFMRYVLNDPTRW AFDVTKQMFGFYFVLLGGYALRHQAHVRVDLLTANLSETPARIVDALGYLIFFFPFAW VFTTRSYEFAMRSYAQGETTYGSVQLPVYPLKMAMAAAAALLLLQGIAEVLKLVFNRQ EVRSDA" gene 27476..28771 /locus_tag="RTM1035_00160" CDS 27476..28771 /locus_tag="RTM1035_00160" /note="COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctM subunit" /protein_id="jcventer:1101493006644_RTM1035_00160" /db_xref="CDD:34282" /translation="MFGLLLLGLFMGHPLAFVLGGTAVLGALIAGKPMVLGIVINRIF GDVLDNFTLIAIPLFVLMARFLSDSGVTDRMFESLRLMMSNVRGGLALAVVFISILLA ATTGIIGASITVMGVMALRPMLQYGYSPTLTTGVIAASGCLGILIPPSIMLILMASYS PLSVGELFAGAMIPGILLGLLYAVWVVIVAFVRPDMAPAVESDEKVSRSALLKMLAIE AVPPLVLILGILGSLLAGIATATEASAIGAMLALLIVIFRGKFRWISFYGAMLETGRT SAMILFIVIGATAFTGVFNITGGLRATQEIIRGMDMEPWMLITMMLFIVFILGAFLDW TGIVLLSFPIFLPIVQEMDVSLLWFVVLMSVVLQTSFLTPPFGYALFYLRAIAPKSVK TSQIIIGVLPFIGLILIMCLGVAIFPQLVTWLPETLYTK" gene 28787..29878 /locus_tag="RTM1035_00165" CDS 28787..29878 /locus_tag="RTM1035_00165" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="conserved hypothetical extracellular solute-binding protein,family 7" /protein_id="jcventer:1101493006644_RTM1035_00165" /db_xref="CDD:34281" /translation="MLTKITLVTGLALAAGIATQSAAQESWTMTTTWPSSLELIEIDK HFVDLANKLTGDALTIEFFEGGALVPAGEVFGAVESGTIQAGGDWPGYWAGRDSAFSP LATTASLFNAIDYVNWIEQWGGADLYNEIYGKFGMVYLPYGVTNNESGFRTNEPIVTL EDLQGKRLRLSGLEQGRLLEKLGGNQVSMAGGEIYQSLERGVIDGAEFSTPNVDYSGG FHQVTKFWATPGWHQSASVFGVMINKASWDALSPETQEDLKIAAQANLIWSLSFTEKR ATEAYQQFKDAGIEITRYDDETLARVQELANEVIIETACENPASAKVYLSQLEYLADY AKWRDASAPFNLGRSPNGPDIEAIRACAN" gene complement(30115..33201) /locus_tag="RTM1035_00170" CDS complement(30115..33201) /locus_tag="RTM1035_00170" /note="COG0841 Cation/multidrug efflux pump" /codon_start=1 /transl_table=11 /product="acriflavin resistance protein" /protein_id="jcventer:1101493006644_RTM1035_00170" /db_xref="CDD:31183" /translation="MAFSISGASIQRPVAVWLLILFCLLGGYWGLNTVGRLEDPSFTL KTALVFVPYPGATAVEVEEEVSDVIENALQQMKQLDRVESKSMPGMAQITVEIEGTYG PDEIPQVWDEMRLRISDVQDDLPQGARAPIVNDDFGDVYGMFYAVKTEGLSPREERDL ATRLRLGLVTVDGVAKVEVQGLTEETITLSIPSARLTELGLPPNQVLGVLNDENLVFN NGEITEGPARIGLSVPPGYVTPEGIEQLRLGAAGEVGQVAIRDIARVSRDEAEQPSQV IRHNGTAAFTLGVSALTNRNVVEVGSAVAARLETLKADLPDSVEITPIYEQHVVVDEA VSSFLLSLAMSVAIVVGALMITMGWRAGLVVGTTLGLTVFVTLFFMSVFGIAMERISL GALIIAMGMLVDNAIVITEGMVIGMARGKSAIKAAAETESSTSIPLLGATVIGIMAFS GIGLSPDSTGEFLFSLFAVITISLLMSWILAVTVTPYLGMLLLKAPKKNTSDDPYKGA FYAIYRGLLWLVLRARVLVVLVIVGITIVSVMAFGQVKQAFFPASNTPLFYVEFQMPQ GTDINVTDREMKRLEQLILSEDKVTDVTTLVGRGASRFMLTYNPEQADASYGQLIVRV ADAEAIPAMANRLNRDLPAEFPNALVRVEELVFGPPSGADVAVRFSGPDPVVLRQLAD DALRIYEAAGTITNPRTNWRQREILVEPIVDESRMRLAGATRSAIADTVRYGTSGLRV GELREGDEVIPIHLRLPATERDGVDRVRDLSAWSDGAGTYVPMANLVERFEPRLVEAL IHRRNRERTITALGGARADLTADEAFKSVRAEIEALPRPDGYSMEWGGQYESSTDAQT SLGKQLPLGFLVMLTISILMFNKVRQPLILWLVVPMSVTGMVLGLLFTGLPFTFTALL GFLSLSGMLMKNAIVLVEEIDVQRAEGVADYKAVIDGSVSRLRPVVLAAGTTIFGMIP LLPDAFFASMAVTIMGGLAFASVLTLVAVPVLYALLFRIRPPKEESTDSKTGTASG" gene complement(33234..34367) /locus_tag="RTM1035_00175" CDS complement(33234..34367) /locus_tag="RTM1035_00175" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="RND efflux system membrane fusion protein" /protein_id="jcventer:1101493006644_RTM1035_00175" /db_xref="CDD:31186" /translation="MKQSWKRIASVTVIAAAALLVLSVFPALRTDVRAQTTTDATKPA AETSEGAEHDRKVTVEVTRATSRTVTRGRTVAGRVAPARTVDIAFQVSGQVLRLEVDP GDKISEGDLIAELDPVDFELAVDRARAAFDLAKSELERAKSLAERGVAAEARFETARA EYAQAEVALREAERRLSQTQIIAPFDAIVARTFIEEYVNVTSAAPVARLQDVSEMRIM ISLPEELAAVARSAPDAFDLVASFPAVPGYTAPLMLRSFATDADRTAQTYDVEFAITG DVDSRLLPGMTARVRLSNAAAESSAQSAMVPVSAIDTSSRTEPSVWIYDEESGQVRRR TVRLGLPVDNEIVVLEGLQGDELVVSGGWWRLRDNQTVTVAGL" gene complement(34369..34911) /locus_tag="RTM1035_00180" CDS complement(34369..34911) /locus_tag="RTM1035_00180" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /protein_id="jcventer:1101493006644_RTM1035_00180" /db_xref="CDD:31500" /translation="MTPAETRSASRRILSAARAIAARAGAGKITIDAVAKEAGLSKGG VLYNYPTKKALLSGLLDAMLAEHRELLDSVPERHPARTLRGHLETVLQSQEVDDDLSM AILATAASDPQLLDPLRGELSDDIGRILSDTQDPQGAMVVFWAIQGVRFQKLLKLPDG GADLRGRVIERLRTLIDELE" gene complement(35065..35709) /locus_tag="RTM1035_00185" CDS complement(35065..35709) /locus_tag="RTM1035_00185" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family protein" /protein_id="jcventer:1101493006644_RTM1035_00185" /db_xref="CDD:40531" /translation="MLRCAIVITFWKQVITMRESKGADVLRGAREVFLKCGFEGASVD AIAEQAKVSKATLYAHFSSKDRLFLSVLRAECDRLSEEICRPLSNLGNAQDALEELSR RMIGLVMDEGYIRLLRVCIGAVPVLPEAGEIYMDAGPTRAITHVAQILKDLHETKSLN VENVQNAASQFIHLSISDVIMPRLLAVDQPVDASEHSKRAVDAFLAVYGRRNDL" gene complement(35855..36178) /locus_tag="RTM1035_00190" CDS complement(35855..36178) /locus_tag="RTM1035_00190" /note="COG1733 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, HxlR family protein" /protein_id="jcventer:1101493006644_RTM1035_00190" /db_xref="CDD:31919" /translation="MDAILRLLMGPWTTYIIWVLNDQGPQRFGVLKRSVPGISTRMLT ERLRMLQGAGVIWREQAETIPPAVTYGLTPRGNDLRSVLDALGTIAERWKAEGVFQDD DLGAV" gene 36334..37146 /locus_tag="RTM1035_00195" CDS 36334..37146 /locus_tag="RTM1035_00195" /note="COG3384 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B" /protein_id="jcventer:1101493006644_RTM1035_00195" /db_xref="CDD:33191" /translation="MARQPTLFIPHGGGPCFFMDWTPPDEWDRHRQFLENLPGTLPER PRALLVISGHWEEPAFTVQTSPTPPLLFDYGGFPPHTYELTWPAPGDPALADRVHDLI RAAGLAAAKDAARGFDHGVFVPLKVAFPEADIPCVQLSVASDLDPARHIALGQALAPL RDDGVLILGSGNTYHNMGVLMQSLRGGPRGPVVGGAFDAWLTEVMTCPDPEERNRRLV HWSDAPGGRDAHPREEHLIPLHIVVGAAGNDIGRKTLEDHVLGAVESAFRFG" gene 37175..38068 /locus_tag="RTM1035_00200" CDS 37175..38068 /locus_tag="RTM1035_00200" /note="COG0702 Predicted nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00200" /db_xref="CDD:31046" /translation="MSDSIQGPFIVTGASGQLGRQVVENLLAKGANPVVAITRTPDKL ADLRARGVEVRAGDFNDPATLGAAFAGGGRLLIISTDDLEPGKRLAAHRNAIAAAQEA GVTHIVYTSLTNPDESSPITFAADHRESEALIKQTGLPHTILRNCLYADLLLMSGAQA IGAGALYAAAGDGKAGYVTRADCARAAAAALLSEIGSTLRDITGPEAVGHAEIAAILS QVAGKEIPYVPITRDALVEAMVTNGLPEFMANVFSSFDVAIAKGNLDMASDDVEKLTG LRPQSVRDFLLANTPALTGQA" gene 38092..38580 /locus_tag="RTM1035_00205" CDS 38092..38580 /locus_tag="RTM1035_00205" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00205" /translation="MLNIPPREGPRPVTTPCAPHTQISQNPDAASYRAFKDRAFDFPF VIRQPSMISVPGAEALCLEHGRGCGCREAFMIGTEFAHVHPPQDGSLHMMLPEDAVPK IVDLGWAEPHPMAAAGMIPPTAVMVYAPRNEPEIDSVLGLLGLSYDFARGRLGRVDNI VL" gene 38714..39757 /locus_tag="RTM1035_00210" CDS 38714..39757 /locus_tag="RTM1035_00210" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="HlyD family secretion protein" /protein_id="jcventer:1101493006644_RTM1035_00210" /db_xref="CDD:31754" /translation="MAAIVIAVAVSGFLIWQSTLSDTDAEGFARGNGRIEAVEIDVAA KLPGRIDTVLVNEGGLVTAGAPLATLDTRQLQANRNQMVAELRRAEIAVENATLLVEQ RAAEVRAAEALLEQRRAEEDVARRQYERSESLTQNSITSERQFEIDRANAFGAAAAVA SAQASLAAARAGVASAKASVIGAEAAVTAAQATIEAIDVQIEDSTLKAPRAGRVQYIV ARAGEIVGAGGRVVNMLDLNDVYMTFFLSTADAGRIGLGTEVRLLLDAAPGIVIPASV SFVSDVAQFTPKTVETEVEREKLMFRVRARIAPELLQKHLDQVKTGLPGVAWVRLDPT APWPAEAQGKVLE" gene 39754..42495 /locus_tag="RTM1035_00215" CDS 39754..42495 /locus_tag="RTM1035_00215" /note="COG1131 ABC-type multidrug transport system, ATPase component" /codon_start=1 /transl_table=11 /product="export ABC transporter ATP-binding protein / export ABC transporter permease protein" /protein_id="jcventer:1101493006644_RTM1035_00215" /db_xref="CDD:31320" /translation="MTDSMPAVRAEGLSLRYGNTLAVDDVSIDLPSGRSVGVIGPDGV GKSSLLALIVGARRMQTGRLEVLGGDMARAGHRARIAPRIAYMPQGLGRNLYPTLSVR ENVDFFGRLFGEGAQERAQRIDELLKATGLAPFADRAAAKLSGGMKQKLGLCCALVHD PDLLVLDEPTTGVDPLSRREFWALIDRIRADRPHMSLLVSSAYMEEAARFDHLVAMDA GKVLATGSTAEILERTGAADLDAAFIALLPEENRSRHKDLSIPPRDPASDGENVIEAE NLTVRFGDFTAVDQVSFRIKRGEIFGFLGSNGCGKTTTMKALTGLLDPSDGTTKIYGR KVDAHDMATRKRIGYMTQSFSLYSELTVRQNLDLHGQLFDMTSAEIVPRIAELAERFD LEDVLDSLPMRLPLGIRQRLSLAVALIHRPEILILDEPTSGVDPVARDIFWQSLIDLS RNDGVTIFISTHYMAEATRCDRISLMHQGRVLVSDTPEAIREEVGAETLDDAFVHHLQ RAQDQDTPPAPEMKEELSAGPATSARRRRGGFSLARLLSFSWRESLELRRDPIRLTLA SLGSVILMIVLGYGVSMDVENLKFAALDFDRSILSQSYVNDLAGSRYFDEEPPLVDHA DLDYRMRAGEISLALEIPPGFAADLERGRPVAIGAWFDGAMPMRADTVRGYIQGMHAH WLTEQMRQVFGDQAVAGNFTLEVRYRYNPDVESLAAMVPAMIPLLLMLIPATLAVLSV AREKETGSIVNLYVTPARRLEFLLGKQVPYVVLGFMNYLLLLALAVVVFGVPVKGSLL ALSLGALIYVVLATGLGLLISAFTQSQVTALFFTFMATLIPAMQYGGIIDPVASMDGM GRVIGEIYPTSHFVTISRGTFSKALGFDDLGGSFLPMLALVPVVVLLGAIFVRKQEK" gene 42499..43611 /locus_tag="RTM1035_00220" CDS 42499..43611 /locus_tag="RTM1035_00220" /note="COG0842 ABC-type multidrug transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, family 2" /protein_id="jcventer:1101493006644_RTM1035_00220" /db_xref="CDD:31184" /translation="MRLRHVLQLSLKEIRGLLRDPLLMVLVAYAFTLDVYVSATAIPE SLNSATIGIVDEDASPLSRRVADAFLPPYFMPPAQIDIAQMDARMDAGIDTFSLVIPP EFQRDLLAGNRPELQLNVDATRVSQAFTGAGSISAIVNQEIAGWLARDAAPVGMPVDL AVRARFNPSLDPAWFGAVTSVISTVTMLSIILSGAALIRERDHGTLEHLLVMPVTAAE IMTSKVLSMGSVVLVATALSLTLVVQAGMGIPIGGSVALYLVGAALHLFATTSMGILL ATIAGSMPQFAMLLLLVLLPLDILSGGVTPRESMPQAVQYIMLAAPNTHFIALAQGVL FRGAGLSVVWPQLVALMLIGSVMFAFALHRFRAFLR" gene 44208..45443 /locus_tag="RTM1035_00225" CDS 44208..45443 /locus_tag="RTM1035_00225" /note="COG3464 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="jcventer:1101493006644_RTM1035_00225" /db_xref="CDD:33267" /translation="MGLGVSDDTVLRQLKKCVQGTAEASTVIGIDDWSWRKSQTYGTI IVDLERRVVIDILEDRDVATCANWLKRHPEVEVISRDRCGLYAQAARLGAPQAKQVAD RFHIVQNLRQAIEEQMNLHGRATGRALLSDADNITAAGSLLKSRLAHRTSREEVFATI HALRNQGLSCSEIGRRTGFPRRSIAKWLQFETPPDRRRAALKRTSPWYFEEFLGQSWK DGIRTGSALFRLIRERGYEGSQTHLQRLLAGWRRAEQQASGPKVKHKILKPVRDPETG HAISPVIAAALCIKPRGKLTSDQARKVDALKAGSPDFATMRRLAMRFNGILRGREADP LPAWIDEAIETDLAPLVRFARTLNRDFDAVKNAIEMPWSNGQAEGQINRLKTLKRAMY GRAGPELLRARMLPFRHTD" gene complement(45463..46134) /locus_tag="RTM1035_00230" CDS complement(45463..46134) /locus_tag="RTM1035_00230" /codon_start=1 /transl_table=11 /product="BNR repeat, putative" /protein_id="jcventer:1101493006644_RTM1035_00230" /translation="MTDRAAPVGIGAREPSLATLPDGRIILSWTEEKGAEAKVRMAIL DGSEWSDARTIHKSSKIYINWADFPSVMALSNGTLAVQWLELNGTSDYQYDVNIAFSL DEGKSWSVPLIPHDDRSQRQHGFVSLVPHQFGGLTALWLDGRKYESQTEGDSFENAMQ LRSRQINSDGTMKPESLLDARACTCCQTSAARTGSGDMVAVYRHRTADEIRDISIVRS TGGVA" gene complement(46324..46782) /locus_tag="RTM1035_00235" CDS complement(46324..46782) /locus_tag="RTM1035_00235" /note="COG2010 Cytochrome c, mono- and diheme variants" /codon_start=1 /transl_table=11 /product="cytochrome c family protein" /protein_id="jcventer:1101493006644_RTM1035_00235" /translation="MKEFDGMKWAAIFFALIAVASAGWYIMQPDYSQTGTQTDEGVAL PAGALVTVTLPASFTEQEQIGAGAYDAVCAVCHGLNGQGRDGVAPPLVHKIYEPSHHS DMAFVLAAQNGVRAHHWKFGNMPAVEGVTRSEILAIVTYIRALQRANGIN" gene complement(46779..48083) /locus_tag="RTM1035_00240" CDS complement(46779..48083) /locus_tag="RTM1035_00240" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein" /protein_id="jcventer:1101493006644_RTM1035_00240" /db_xref="CDD:31327" /translation="MSLLDRYHVFVHNVSAAFGYDYNDATPDWVHPFIHLILVLAPAL LISVGLYLAIRGVLKLWKDRSMPAFHAEPIRGLEGSLFSTVLRYSRRQQALMIMVSLI AMPILYLTLELPKQIVNNALDSDRFPIAVLGRDLDQVVFLMLLCGLYLLAIILNGLNK YGLNVFKGYVAERFLRRFRLLVYRQWRSDADSRNQSEIIPILAQEVEPIGGFAADVLA LPILQGGTLLTILSFMFVQDPVLGAAALTVLPIQLVLLPKLQRRVNALSRTRIREVRQ LGRQLSDQLRERQVNPAGLLPVSTSFRELERVRRKIFRLKFFIKALNNFLTALTPFLF YSLGGYFVIEGRITLGALVAVLAAHKDFSAPLKELFNYYQTLEDTRIRYQEIMAFLSK SIQPLGHAQPDNTVPQEAGQFERSKQRYPALSLVGQGAIATS" gene complement(48092..48625) /locus_tag="RTM1035_00245" CDS complement(48092..48625) /locus_tag="RTM1035_00245" /note="COG4454 Uncharacterized copper-binding protein" /codon_start=1 /transl_table=11 /product="copper tolerance protein" /protein_id="jcventer:1101493006644_RTM1035_00245" /db_xref="CDD:34133" /translation="MTNFLRTCTIALALVLPAFSVGASSGKGQQPHARAFEVPGHDPI GKPGDGSSIDTTIELSIRETESGYMLFEPDALHIESGSVIRFLISNLGGLDHEFFLGS FNEVAEHQQWMREHPDMQHDNANSVSIPSGQNAELIWEFSDMTNLEFVCLIPGHREAG MWGVIIVHDHLAPKSKG" gene complement(48730..49443) /locus_tag="RTM1035_00250" CDS complement(48730..49443) /locus_tag="RTM1035_00250" /note="COG4454 Uncharacterized copper-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00250" /db_xref="CDD:34133" /translation="MQKILLSTAITLTLATGAYASPGHTSKAETAAPQMDIGVPGDAA KVDRTIDVTLLENDEGQMLIESEPMNIKEGETIRFNITNKGELEHEFVLDTVERNAEH KIEMAKMDMEHDDPNRIRLDAGASGEVVWTFANSGTFEAACLIPGHYESGMHREVAVG DQMAQADVEYTSGTIKKIDAKAGKVTIIHGPLVNLDMPAMTMVFRADEAMMAKMAEGQ GIEFVADRVKGKLTVTQMK" gene complement(49490..50764) /locus_tag="RTM1035_00255" CDS complement(49490..50764) /locus_tag="RTM1035_00255" /note="COG2132 Putative multicopper oxidases" /codon_start=1 /transl_table=11 /product="putative copper-containing oxidoreductase protein" /protein_id="jcventer:1101493006644_RTM1035_00255" /db_xref="CDD:32315" /translation="MGLPEAAQMDSAATAITARPNSGPDYTPVVTLNGWTLPHRMNNG VKEFHLVAEPVERELADGMIAHLWGYNGQSTGPTIEAVEGDRVRIYVTNKLPEGTTVH WHGLILPSGMDGVSGLSHPSIPPGKTFVYEFDLVKSGTFMYHPHGDEMTQMAMGMMGM FVVHPKDPTFMPVDRDFLIMLNAFDIDPGTYVPRIMTMTDFNLWTWNSRIFPDIDPLV VNKGDLVRVRVGNLTMTNHPIHMHGYDFKVTCTDGGWVPPEAQWPEVSIDIPVGAMRA YEFVADHLGDWAIHCHKSHHTMNAMGHDVPTFIGVNKKPLTQKIRQFQPEYMPMGMSG MGDMAKMEMPLPDNTIPMMTGWGPYGPIEMGGMFSVVKVRDGIDADDYSDPGWYENPP GEMAYEWTGELPDFASNNSPKTILTPKPTSKG" gene complement(50860..52323) /locus_tag="RTM1035_00260" CDS complement(50860..52323) /locus_tag="RTM1035_00260" /note="COG5283 Phage-related tail protein" /codon_start=1 /transl_table=11 /product="hypothetical conserved membrane protein" /protein_id="jcventer:1101493006644_RTM1035_00260" /db_xref="CDD:31727" /translation="MRVSKFPLVFGFPLILGACATAVPGIYTEPKAGFANISSQVTPA IGKRTAFAETQAENEALKKQVHAMVHRKTISADTAVQVALLNNKGLQASYANVGLSAA EAWQQSTPENPIVAIGILGIGAPELGAYRAIEGLIRSNVLDATTRKQRTAIADANFRK AQLSAVNDTLALANQTRKAWVDAVAAFEAVSYLRRAKATSDAGSELAMRLGETGALNT AGQAREQAFNAELAGQLAQARLNATRSKEQLTRLMGLWGTEVDYYVPDALPALPRSVG RVTDIEAKALRNRVDLRVAKLGLEAQAKAFGLTDQTRIISDLEFIAGFEAEREIEDGE TETVTTPQVEVEFAIPIYDTGKARMRKAELSYLQAANVLAERAVNVRSEARGAEASYH AAYKIARHYRDVLVPLRTTVEEEGLLSYNGMITNTFELLTDVREKLGASLEAANAKRE FYMAQADLTAAIYGGGEGGGGAGGEGATLAAGGGAGH" gene complement(52323..52598) /locus_tag="RTM1035_00265" CDS complement(52323..52598) /locus_tag="RTM1035_00265" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00265" /translation="MSLAQILRETMFINQVTFMKIHLLMGASALGLGACAYEPTPLPS VATQQAVINTAVSSPISYQDPLAGYTYRGPTGPRDWRSVNQEQTEGN" gene complement(52618..53040) /locus_tag="RTM1035_00270" CDS complement(52618..53040) /locus_tag="RTM1035_00270" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00270" /translation="MSFRVVISSWIKAFTCIAFALALVFSPPSAAHAASGMHDGHQAK SVSIVGAAETHDTGSDAHHAHTKLKVTSDIDIAASDKDGKEKQSQECCNGICISVVFI EDTKIRAEPVGTSEYVILDGQTYSVETAGFLRPPRFLI" gene complement(53220..53378) /locus_tag="RTM1035_00275" CDS complement(53220..53378) /locus_tag="RTM1035_00275" /note="COG2608 Copper chaperone" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00275" /translation="MQKPIMAADPDAKVSCDLTAPIVGVDSTLDETALAAAISGAGYG AEKLAEVR" gene 53738..54355 /locus_tag="RTM1035_00280" CDS 53738..54355 /locus_tag="RTM1035_00280" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00280" /translation="MPGIQFVSIVLAFSLAALLPVLCLYILLSPGFAAALAAGGPSLA RFLRQVTTNGLPVVFAVNYVSFFLFAVIQKPKVARRDTAFFVLVDILLRAILFPSLHA LIYVLSADWFESFGGSRATALSVVAPTLARSAFFENISGVYLYATMISALPLYVSAFG QSEFLGPTVRRLPIKAGLMLLALFAFALSVGLIAIGAQGIAYLQG" gene complement(54367..55710) /locus_tag="RTM1035_00285" CDS complement(54367..55710) /locus_tag="RTM1035_00285" /note="COG0531 Amino acid transporters" /codon_start=1 /transl_table=11 /product="amino acid permease" /protein_id="jcventer:1101493006644_RTM1035_00285" /db_xref="CDD:30877" /translation="MQKHNKNHDGNDGYREGSISLGGAVAMGTGVMIGAGIFALTGQI AQLAGPLFPLAFIAGAIVTSFSAYSYIKMSNAWPSAGGIAMILQKCYGSGAVAAGAAL LMALSMVIAESLVARTFATYVLRPFDITGGPLVPVLAVAVIVFAFLVNIAGNRSVGLF SLIMAAIKIGGIALFGIAALWSSGFQFAAASETAETFGVTGFIASVALAILAFKGFTT ITNSGGEITDPHRNVGRTIMLSIAICVVVYLLVAFGVGASLTIDEIIAARDYSLAQAA EPALGQVGFYLTVVLAAVATASGVLASVFAVSRMLTMLTEMKMIPHSHFGMSGAVQRH MLVYTVVIASTLAVLFDLGRIASLGAFFYLVMDMIIHWGVFRYRRTEVGASSIVLLSA LSLDAIVLAAFTVMKLQSDPMIVLYAAVGMIAVFAFERVYLSRWLAPQAAHSHGE" gene complement(55819..56475) /locus_tag="RTM1035_00290" CDS complement(55819..56475) /locus_tag="RTM1035_00290" /note="COG2717 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00290" /db_xref="CDD:32610" /translation="MLTGYLLLASRAEWSEMHRYNRALGDLSLLLIVAAMAIGPLARL SSAPFLRKLMPYRRELGIYAVLAATVHTIIILIGWVELDFARLFGFEFHPQLQRYVML QHGFALANVVGIAALLYGFVLAGTSNNFSQRVLGTSVWKYIQQGAYVLWWLAVLHTAY FLFFHFLDFHRQMPEPNWARWPFVALVASVIALQGAAVVVTWRSQTSRRIYGAPSQRE " gene complement(56609..57262) /locus_tag="RTM1035_00295" CDS complement(56609..57262) /locus_tag="RTM1035_00295" /note="COG2020 Putative protein-S-isoprenylcysteine methyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00295" /db_xref="CDD:32203" /translation="MTDAGASYGLWLLVFINSGVFIIFAFSFFKPQTKRDWRSFGAFS AFVVALFTEMYGFPLTIFFLSGWLQSTWPEVDWFAHDSGHLPEMMFGWQSNPHFGPFH LLSFVFIGGGFWLISVAWHHLWNAQRQGLLATTGPYARIRHPQYVGFVLIMLGFLVQW PTLLTLAMFPVLVWMYARLARGEEKDSRERFGAGWDRYASRVPAFIPNVNTLQNVER" gene 57301..57453 /locus_tag="RTM1035_00300" CDS 57301..57453 /locus_tag="RTM1035_00300" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00300" /translation="MTAVHEEVHSDAKQQWQPDQQSAAQDVHPVVVTQEKDANCQRND QIDAGA" gene complement(57547..59901) /locus_tag="RTM1035_00305" CDS complement(57547..59901) /locus_tag="RTM1035_00305" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="copper-translocating P-type ATPase" /protein_id="jcventer:1101493006644_RTM1035_00305" /db_xref="CDD:32399" /translation="MNDQVSHAAHETESNIYVCPMHPEVRQNGPGDCPKCGMHLVPEA ELDNHAGHDHHGHDHHAGAAPADGRYDTVPEGYDGAVYTCPMHPQVRQVEHGSCPICG MGLELESGVPMDDGPNPELVDFTRRFWVGTVLTIPLLILTMGPYLGFPGVREIFGERA TLWIELVFGTPVVLWCGWPFLVRGWNSFRTMNLNMFSLIGMGVIAAWLFSVVAVLAPG IFPDGFRDAEGHVGVYFEAAAVIVTLVLLGQVMELRAREGTGKAIRALLDMAAKTARV IRDDGSEEEIPLEDVQVGDRLRVRPGDKVPVDGVVLDGRSSVDESMISGEPVPVEKTE GDPLTGATINGTGSLVMEATRVGSDTMLAQIVEMVSNAQRSRAPIQKYADKVAGYFVP AVIGIAVLSFIAWAVWGPSPALSYALISAVAVLIIACPCALGLATPMSIMTATGRGAQ AGVLIKNAEALERFEKVDTLIVDKTGTLTMGKPQLVAVLPQPGHDEAEVLRLAASLER GSEHPLAEAIVRGAEERDVKMADADDFEAVTGKGVKGVVGGKVVALGNLAMIRDLGLE AGDLTAKANARRDEGETVMFVVLDGEIAGLVAVADPVKETTPAAIKDLHALGFRVIMA TGDNERTAKAIGARLGIDEIRADVLPEDKARIIKELQQQGRKVAMAGDGVNDAPALAQ ADVGIAMGTGADVAIESAGITLVKGNLDGIVRARRLARATMRNIRQNLFFALIYNASG VPVAAGVLFPFFGILISPMFAAFAMSASSISVVLNSLRLRGAKI" gene complement(59898..60845) /locus_tag="RTM1035_00310" CDS complement(59898..60845) /locus_tag="RTM1035_00310" /EC_number="2.7.6.1" /note="COG0462 Phosphoribosylpyrophosphate synthetase" /codon_start=1 /transl_table=11 /product="phosphoribosylpyrophosphate synthetase" /protein_id="jcventer:1101493006644_RTM1035_00310" /db_xref="CDD:30810" /translation="MILVAFPEMRPLAEDLAPALGADLLALDWHHFPDGESLISLPGD LDGADVAFLATLRDPDRLALPLRFAAATAREMGARRVGLIAPYLGYMRQDRRFERGQA VSAPLFAQFLGESFDWLASVDPHLHRIARLQDVFPMPAIRAVSAPLLATWISTNLPDA VLLGPDSESQQWVAEVARLAGRPYEVLRKVRSGDRSVDVSVPESAALHEGTPVILDDI ASSGVTMARAVERLLAAGTAAPVCLAIHAVFAHGAQDAILSAGAARIITTDTIPHPTN AIGIAGLLAEAILSVVTALDLPVAGTIRLDPNPAERTTE" gene complement(60842..62350) /locus_tag="RTM1035_00315" CDS complement(60842..62350) /locus_tag="RTM1035_00315" /EC_number="2.4.2.4" /note="COG0213 Thymidine phosphorylase" /codon_start=1 /transl_table=11 /product="thymidine phosphorylase" /protein_id="jcventer:1101493006644_RTM1035_00315" /db_xref="CDD:30562" /translation="MTETLALVSSRIDTYRQPVVYMHEDCHVCRSEGFAAQTRIRIDL KDRWIIATLNVVRRGAWLAVDQAALSVSAWAALGAEIGDEAAFSHPEPPASASMIRAK AYGERLDRAGFATIVRDTLDSRLSDLDLAAFVTACAGDRLNEAETVALTRAMKEAGQT LDWGQHTVLDKHCVGGLPGNRTTPIVVAIVAAAGHLIPKTSSRAITSPAGTADTMEVM APVALDAAALRRVVEAEGGCLVWGGGLALSPADDHFIRVERPLDFDSTGQLVASVLSK KAAAGATHVLIDMPVGPTAKVRSAGAAEALGIRLSSVGKALGLNLALHISDGVAPVGR GMGPALEAHDVLAVLRRAPDAPGDLRARALDLAGHLLDLAPHAVAGRGRDRAQALLDS GAAEAKFMAICAAQGGFRKPGTAAQQIEIRAPHAGQLTAIDNRRIARIAKLAGAPRQK SAGIRLLVRIGDWVDKGQPLYELHAETPGELAYALAYAESQTGVLTLSEAVS" gene complement(62347..63729) /locus_tag="RTM1035_00320" CDS complement(62347..63729) /locus_tag="RTM1035_00320" /note="COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family protein" /protein_id="jcventer:1101493006644_RTM1035_00320" /db_xref="CDD:31429" /translation="MIPTARPKLRFLGAAGTVTGSRYLVEALGRRILVDCGLFQGFKQ LRARNRKPFPVRVNTIDTVLLTHAHLDHSGYLPTLIRAGFRGRVLCTEATADLCGLIL PDSGHIQEEEARFAARRGYSKHKKPKPLYTLKDAKAALDRFDLQPFDRRIDLGDGIAA RFIPAGHLLGAAQIRLEVGGRVVHFSGDLGHDPDPLMRPPQPFGGADVLVCESTYGNR SHPDVDPEAELAPILKRTFARGGTVLIPSFAVGRAQGLMLHIARLMERGDIPYVPVFL NSPMAVNATEIYHRHHAEHHVSREDCIAMFEIAKRVNTVEQSKELNTRQGPMIIVSAS GMLTGGRILHHLASFGGDRRNAILLSGFQAGGTRGAALAGGARTLRMFGREFPIEAEV VQLQSFSGHADADEILRWMSAGPAPEMTYLTHGEPVTADTLRFRVEHELGRSVRVPEH LESVYLDRPR" gene complement(63726..64091) /locus_tag="RTM1035_00325" CDS complement(63726..64091) /locus_tag="RTM1035_00325" /note="COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00325" /translation="MMPIFYFTAVAVILFLALRMTCGACVMGGPAGAGRVRLPVVPLG WALSLFLALTYLVCIAFDLIFPAYAMYETWSGLLPGFVWLTPVGFIIGLVESFLYGWY AALIFGGLYNAIAARGTAT" gene complement(64558..65025) /locus_tag="RTM1035_00330" CDS complement(64558..65025) /locus_tag="RTM1035_00330" /note="COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes" /codon_start=1 /transl_table=11 /product="cardiolipin synthetase" /protein_id="jcventer:1101493006644_RTM1035_00330" /db_xref="CDD:31691" /translation="MAQTCVYLTSPYFGPGTVVDRALQDAARRRVDVRLLVPRTSDPM VAGWATRAAYAQLLSAGVRVYEYLPRPLHAKTSVVDTGWSIIGSANLDYRSLFVNQEL VLVAHDRVLAGQLQAQYLQDLSDAREVPLRAWHSRSWRARGFEVIGWAARRLL" gene complement(65184..65879) /locus_tag="RTM1035_00335" CDS complement(65184..65879) /locus_tag="RTM1035_00335" /note="COG0517 FOG: CBS domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00335" /db_xref="CDD:33251" /translation="MLAKDIMTTSVISVPLEGQIEDAVRLMLDHNISALPVVDAEGDL KGLVSEGDLMRRVRETDGPRRSWWLEVLGGASESAQDFVKLKSHRVEDVMTRDVVSVE EDTNVAEIARLLEKHRIKRVPVVRSDKVVGIVSRANLLHALSALQDGALPEPSEDDRV LRAKIEEALKEVPGAAVNLINYTVDKGNVAVWGVADSDFEENAIRVAVENVPGVRMVE VHMGRLPAWAYGI" gene complement(65919..66521) /locus_tag="RTM1035_00340" CDS complement(65919..66521) /locus_tag="RTM1035_00340" /note="COG0723 Rieske Fe-S protein" /codon_start=1 /transl_table=11 /product="ubiquinol-cytochrome c reductase, iron-sulfur subunit" /protein_id="jcventer:1101493006644_RTM1035_00340" /db_xref="CDD:48646" /translation="MMRQTIDETNQLPATERRDFLYYATASTGAIAAGAAVWPLINSM NPSADVTASGTVKVDLSGVEPGQRITVKWQGHPVFVWRRSEAAIQAARAVDLDQLPDP VDEAGENPNTSGEEPALDENRAAGEDGEWLVVIGVCTHLGCIPLGQDGSAVGEFGGWF CPCHGSHYDTSGRIRKGPAPRNLDIPPYDLGDDLQLVIGT" gene complement(66518..67360) /locus_tag="RTM1035_00345" CDS complement(66518..67360) /locus_tag="RTM1035_00345" /EC_number="1.3.1.10" /note="COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)" /codon_start=1 /transl_table=11 /product="enoyl-(acyl carrier protein) reductase" /protein_id="jcventer:1101493006644_RTM1035_00345" /db_xref="CDD:30968" /translation="MPEFDACCDPAELLDLSGRKGLVVGIANDRSLAWPAALHFRQAG AELAITYVDERTKPHVVPLAARLEAPILLPCDVNAPHELDAVFDAITDRWGKLDFILH AVGSVPPGDLHGRLTDCSAAGFSQAMHVSVHSLIRMAHLAEPLMKSGGSLITLSYLGG ERVVENYNVMGPVKAALEATVRYLAHELGPSNIRVNAISAGPVMTRAASGLTGFAGLL DATARVAPLRRNVTADEVGRAALLFASDYTGGITGEVLHVDAGVHVESPVAAAKMNVK SEES" gene complement(67353..67532) /locus_tag="RTM1035_00350" CDS complement(67353..67532) /locus_tag="RTM1035_00350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00350" /translation="MEWLFENWVLVLVFGGMAAMHLFGHGHGGHKHGKSAKRHGAHDK KSEASADTEAVSEDA" gene complement(67516..69222) /locus_tag="RTM1035_00355" CDS complement(67516..69222) /locus_tag="RTM1035_00355" /note="COG3243 Poly(3-hydroxyalkanoate) synthetase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00355" /db_xref="CDD:33055" /translation="MPYVQDAFERWVLLLDTLRERADNMIAHERQGMPPLLDFDYELL LDARTFERSANYALLRITRVGDDCWDDCVDEAKPPVIVIDPRAGHGPGIGGFKRDSEV GMAMHEGHPVYFVIFYPEPMPGQTLSDVHYALRDFVLEVARRHPDTAPVLYGNCQAGW AATLLAADCDGLTGPIVLNGSPLSYWSGEAASSPMRMMGALSGGAWAAHMISDLGDGR FDGAWLAQNFETLQPEKAIWDKYATLFAHADTERERFVEFERWWNGYYTLSREEILGI TQNLFIGNRLEQGEMQLDAHCTVDLKRISNPLIIFASDGDNITPPEQAMGWIGKLYPD TDALKAAGQRIVYMTHPRVGHLGIFVSGSVARLQHRAILESLDDVEALSPGLYEMVID NPSGDPDCETGDFEVRFEPREVDDLGIASDDAALKQVAQISRINEAVYSIFVSPWIRA ATTPASAEALRALHPMRWTRTMFSEQVNPWMALIKSTAETLRETRSPLPDDHPAIVAE RALSARTGEGIGAWRKGRDAWITHVFGAMFGNFPFAAATTQAEKPSASSKKGMNNYGM AF" gene complement(69299..69634) /locus_tag="RTM1035_00360" CDS complement(69299..69634) /locus_tag="RTM1035_00360" /note="COG0018 Arginyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00360" /translation="MPRKTMDRKSGGTRHSSSDDDDLRILFSQMTCACAETCGHADAP MARALFNRVEMMNQPPSLAARALGIEPGDASYLLTGLREDVAKDFVRVMLAGRPSIDT TNQEEADDE" gene complement(69727..70353) /locus_tag="RTM1035_00365" CDS complement(69727..70353) /locus_tag="RTM1035_00365" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma-70 factor, ECF subfamily protein" /protein_id="jcventer:1101493006644_RTM1035_00365" /db_xref="CDD:31783" /translation="MASQDSGKPDVPDASPERALLDGRGAFMGFLVKRLGNRADAEDV LQDFCIRVLSRKDQLREVERMDAWLYTILRSTLNDHYRKGTRRSRLAAAAAREPEEWI ADAPSQMARLCTCHGGLISELRPADAELIRRIDFGEEDRESVAADLRLNRNALGVRLH RARTALREALTTHCGKCCQEDRDDCYCPPEGCENDKHETDCEEEGQEH" gene complement(70574..71464) /locus_tag="RTM1035_00370" CDS complement(70574..71464) /locus_tag="RTM1035_00370" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="Putative transporter, DMT superfamily protein" /protein_id="jcventer:1101493006644_RTM1035_00370" /db_xref="CDD:40969" /translation="MSPTVITKIVLAMFLWAACFPLITAGLQYAPHLTFATMRAGLAG AALVGLAMILRRPFPRGWRTWLTLGIVGIGATSLGFLGMFHAAEFVSPGLATVIANAQ PLLAAILGVVWLGERLPKVGWVGLSIGFMGILVIALPQLLDGGQEGSAIGFAYIVLAA VGVTISNVAIKSIAGKVDGLFAMGLQLLIGSAPLAFAALALEDQNAIQWNAVFTASLL GLALFGSALVYWLWFSVLEAVELNRAIVFSFLVPIFGLSIGALFFGERLSGIQFSGIA LVILGIVFVNLKGARRSQGR" gene 71720..72388 /locus_tag="RTM1035_00375" CDS 71720..72388 /locus_tag="RTM1035_00375" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma-70 factor, ECF subfamily protein" /protein_id="jcventer:1101493006644_RTM1035_00375" /db_xref="CDD:31783" /translation="MNHDPNDRLSTADQPNTAAKDADIAVRRSLVEGRQHILNFLRRR LGDPEAAEDVLQTFMLRAIDRSEQLRDVRAVRGWLGQILASSIADYGRKVSRRRQREV VMAPTDLDSVQNGFDEELDEAICNCLYKLLPTLRPEYAEVIWRVDLQEQPRDAVAKDL GITLNNITVRLHRGRQALKTRLEQMCLTCPVHGFLDCDCDAAEKARARFQAMKDDAGA KTTD" gene 72721..73971 /locus_tag="RTM1035_00380" CDS 72721..73971 /locus_tag="RTM1035_00380" /note="COG2230 Cyclopropane fatty acid synthase and related methyltransferases" /codon_start=1 /transl_table=11 /product="Cyclopropane-fatty-acyl-phospholipid synthase" /protein_id="jcventer:1101493006644_RTM1035_00380" /db_xref="CDD:32411" /translation="MWLLAKSLRRLVQNGRLTIYDPCGQTWHFGPGGEPAVSVRLTEK VLPVQLLVNPSIALGEAYMDGTLRIETGSLRDLLSICMTDIDTIDALPGRRLTRWLDA FLSRRLHHNPISRSHANVAHHYDISTELYDLFLDADRQYSCAYFPIGTETLDEAQAFK KKHIAAKLLMRPGLEVLDIGSGWGGLAMELAQQHEARVTGLSLSTEQIAAARERAQQT GLFDQVAFERRDYREEHGLYDRVVSVGMFEHVGRSGFDAFFTTLQRVLRPDGVALLHA IGRMAPKGGSDPWIRKYVFPGGYLPTLSETIAAAERAGMWVTDVEVLRLHYAETLRHW SERFAQERETARMLYDERFCRMWEFYLAVCEMAFRNGRLMVFQIQLAKRRDAVPLTRD YIAKVKAGESAWDISTGTEFTRAG" gene 74013..75011 /locus_tag="RTM1035_00385" CDS 74013..75011 /locus_tag="RTM1035_00385" /EC_number="1.2.1.59" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="jcventer:1101493006644_RTM1035_00385" /db_xref="CDD:30406" /translation="MIGKRVADAVVAQEDMDLVGVADVTSDWRARMARAKGFALYAAD PDRTPAMREAGLDVAGGLDDLLATADIVVDSTPKKVAVRNVETYRERGIRFIVHGGEK HEVTGHSFVAEANYASAIGRDRTRVVSCNTTSIVRTLTALKVAGLLGSARGTLLRRAT DPWESHLGGIMNTLVPEPDIPSHQGPDAQSVDPDLDVITMAVKVPQTLAHLHYWSVRM PRKASKDEVLEAFRASSRIALIRMADGLGALNAVKEMMADFGRPNDSLYEVALWEDML KVEGDELYYAYMVDNQAIVIPETIDAIRALTEAERDGSASIARTNAALGVGTFTAT" gene complement(75057..75827) /locus_tag="RTM1035_00390" CDS complement(75057..75827) /locus_tag="RTM1035_00390" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00390" /db_xref="CDD:40206" /translation="MKRLAEKVTLITGGAAGIGLETARLFLSEGAKVALVDLHVDDLS DAAGDLGNPDDLLTIAADVSSVEDCKRYVAQTVEKFGRIDVFFNNAGVEGMVAPLVDQ KIEDFDRVMAVNVRGAFLGLQHVLPVMTGQQSGSVINMSSIAGLKGSPNVAPYITSKH AVVGLTRAAAIEVAGHNVRVNSVHPSPVNTRMMRSLEEGFNPGHGDEVKQQLAGTIPL GRYGESIEIANLVLFLASDESAFITGAQYPIDGGMSAG" gene complement(75846..76757) /locus_tag="RTM1035_00395" CDS complement(75846..76757) /locus_tag="RTM1035_00395" /EC_number="2.7.2.2" /note="COG0549 Carbamate kinase" /codon_start=1 /transl_table=11 /product="carbamate kinase" /protein_id="jcventer:1101493006644_RTM1035_00395" /db_xref="CDD:30895" /translation="MLVVAALGGNALLRRGEPLTAKAQRENVATAATALAQIIKAGHR LVVTHGNGPQIGLLALQGAAYKPDAVFPLDVLGAETDGMIGYMIEQALENALGHDRPV ATLLTQIEVDPKDPAFAKPTKFIGPVYDKAEAERLAQARGWSIAADGAHWRRVVPSPM PSGIPDLKVLELLLEQDVTLICAGGGGIPVVRRADGSLIGVEAVIDKDHATALLAHKL NADALLLLTDVEAVFRDFGTETQSAIWQVSPEDAVRLDLPDGSMAPKVAAAATFVSDR ARFASVGRLEDALALLDGKAGTMIVNN" gene complement(76760..77761) /locus_tag="RTM1035_00400" CDS complement(76760..77761) /locus_tag="RTM1035_00400" /note="COG0078 Ornithine carbamoyltransferase" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase" /protein_id="jcventer:1101493006644_RTM1035_00400" /db_xref="CDD:30427" /translation="MSYNLRNRHFLALRDFTPQEISFLLKLSADLKAAKYAGTEVPRL TGKEIALIFEKDSTRTRVGFEVAAHDQGAHVTYLGPSGSHLGKKETVKDTARVLGRVY DAIEYRGFGHPIVETLAQYAGVPVYNGLTDEFHPTQILADFLTMQEHSDKPLREIAYC FMGDAGNNMGDSLLIGGAKMGMDVRLCAPESLWPGQAIRDEADDVAVQTGARITITED VDAAVKDVDFVYTDVWVSMGEPKEKWAERIELLTPYQVNSDVMAKTGNPRAKFMHCLP AFHNAETEVGADIEEEFGITAMEVTEEVFESPASIVFDQAENRLHTIKAVLVATLGN" gene complement(77785..79014) /locus_tag="RTM1035_00405" CDS complement(77785..79014) /locus_tag="RTM1035_00405" /EC_number="3.5.3.6" /note="COG2235 Arginine deiminase" /codon_start=1 /transl_table=11 /product="arginine deiminase" /protein_id="jcventer:1101493006644_RTM1035_00405" /db_xref="CDD:32416" /translation="MSEPKLGVHSEAGTLRQVIVSPPGLAHRRLTPDNRENLLFDDVF WVKQAIKDHAVFADVMRGEGVEVLDAMALLGETLDISDARAWVLDHRITRNDVGVGMR DDLRAWMEGLPGTELARLLVGGIRVDDLPFTPSGMFGSYLGPHGFVLPPLPNFIFTRD NSAWVYGGVSLNPMHFAARRPETLLMAAVYRFYPTFADRVRVWFGDPTREFGTATLEG GDIMPIGHGVVMVGMGERSTPQAVGQLAEALFEGGDVTRVIACQMPSSRAAMHLDTVF THCGGDVVTTFKEVADAITCYDLRPGQGKAALDIRRDARHIFEITAEILGHKKLHLVP TGGADAAEQSREQWNDGNNVLALRPGVVIGYDRNDDTNAALKEAGIEVLAIPGAELGR GRGGSHCMSCPTIRDAI" gene complement(79038..80444) /locus_tag="RTM1035_00410" CDS complement(79038..80444) /locus_tag="RTM1035_00410" /note="COG1288 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00410" /db_xref="CDD:31479" /translation="MAARFPTAYSILFGLIIVVAALTWIIPAGQYDRAMNEEVGREIA VPGTYQTVEPNPQGVIDVMLAPVAGFYDPDSYAANAIDVALFVLLLGGFLGVVNATNA IDTGIQTAMVRLKGREIWMIPILMSLFALGGTTYGMAEETLAFYALLIPVVIAAGYDS VTGVAIILIGAGIGTLGSTINPFATVIASNAAGIPFTDGIALRLVLLLGGLAICVAYV MRYASKVKADPARSVVAAQRDSDRQFFLNETDATFEEPKLSGTQKLVLILFFTTFAVM IWGVSSQGWWMARMGALFFGMAIVVGLVARMGEKKLTSSFVDGAKDLLGVALVIGLAR GIVVIMEQGLIADTILNSAADTLGGLPEVAFINLMLWIEIGMSFLVPSSSGLAVLSMP ILAPLGDFAGVGRDLVVTAYQSASGLVNLITPTSAVVIGGLAIGRVSFDRWVVFVWPL LLILVVFISAGISLAAIL" gene complement(80503..82869) /locus_tag="RTM1035_00415" CDS complement(80503..82869) /locus_tag="RTM1035_00415" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="Copper-translocating P-type ATPase" /protein_id="jcventer:1101493006644_RTM1035_00415" /db_xref="CDD:32399" /translation="MKKLTLEVRGLFEELDHLAVERHLSALGGVHSAEANPASASVTV HYDETAVGEEELRNTVEACGFHCAGERVPNHVCHADHQMSGAEAPAGHDAMAHEMGHG GGMDMASMVRDMRNRFWVALLFTIPIFTYSPMGGLFTPPAPPFGLELDLWLFFLGSAA IIWPSWPFFVAAWRALRNGILNMAVLVVLSVGTGYVFSVGSTFFFPGVQFYEAVAVLL VFILLGHWLEMRARAGASAAIRALLDLAPPMATVIRDGQDVEVPTSEVLEGEIVLIRP GNKIPVDGEVVEGASLVDESMLTGESMPVNKAVGDTVIGATINKSGSFRYRATKVGAD TALAQIVKLVQEAQNSKAPAQLLADKASQWLVLIAVVIGLATFAVWFWWIGSPLLFAL TLTITVFVIACPDALGLATPMAVMVGTGLGAQHGILFKNAGALEDATKLDVIVFDKTG TLTMGEPRVVEVVAAEGGAEDDALRAAAAVDRGSDHPLALAIVERAADLDVPQMAEFL NLEGRGARAEVAGKTVLVGNRRLMDEEGIDVGTLTAEAERLKGEGRTVVHVAQGGRML GLIAIADAPRPSAKATVAKLRARGVEVAMLTGDNEGTARRIAGELGIDIVLADVLPGQ KAEKVKELQAQGKKVGMVGDGVNDAPALTQADVGFAIGAGTDVAMESADVVLMKSDPY DVVGAIELSRATLRKMHQNLFWAVAYNVVAFPMAAGVFYPLIISPAVAALAMSGSSAL VAVNALLLKRTRLEGIGAGKSGSASGGGQGDAQAGQVPLHAGHSQKSH" gene 83228..83737 /locus_tag="RTM1035_00420" CDS 83228..83737 /locus_tag="RTM1035_00420" /note="COG2252 Permeases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00420" /translation="MCLSAQVSFAASVFLVGGGTAISIVAWRRNKRYLPLALMPLFAG LQQFTEGFVWVGMNGNDPLTVLWGAMGFIFFTWFMWPIWVPYSVYVLEPDDSPRKRLF RLMALIGLAFGLLLYIPHGLNSSMVVVEINNQSLAYEKSMWLDYMMPRWLTNTIYVGS DAGGGRIVR" gene complement(83747..86617) /locus_tag="RTM1035_00425" CDS complement(83747..86617) /locus_tag="RTM1035_00425" /note="COG4644 Transposase and inactivated derivatives, TnpA family" /codon_start=1 /transl_table=11 /product="Transposase Tn3" /protein_id="jcventer:1101493006644_RTM1035_00425" /db_xref="CDD:41571" /translation="MTDRQRAVLFDLPTDQAALLRHYTLADDDLEIIRGRRRSHNRFG FALQLCALRYPGRLLAPGEVIPEAVTRFLAAQLGLRPDDLADYAAREETRREHLAALR EVYGYKMFTGRGSRDLKAWLEDAAETARSNEDLARSLVEQCRATQTILPGITVIERLC ADALVAAERRVDARIAGRLDKEMGNRLDALLTEDAGGSVTRFVWLRQFEVGQNSADMN RLLDRLEFLRALAPGGSILADVPPHRVTRLRRQGERYFAGDLRDISGERRLAILAVCA LEWRSAIADAVVETHDRIVGKTWREAKSRCDARADDAKAALKETLQAFSTLGSALLEA HEDRASLEEAVQNAGGWSSLKGLVATAAQLTDTLAADPLAHVVHGYHRFRRYAPRMLR LLDIQAAPVAVPLLEAAGIIARTETTVTLPLTFLRRGSKWQRHLNADEGDGQRLWEVA VLFHLREAFRSGDIWLVRSRRFGDLKEALVPAEVARATPRLAMPFEPETWLADRKVRM SDALRRLARAAKAGAIPGGSIENGVLKIDRLTAAVPEEAEAVVLDLYGRLPGIRITDL LLEVDDDIGFTEAFTHMRTGVPCTDRIGLLNVLLAEGLNLGLSKMAGATNTHDYFQLS RLSRWHVESEAMARALAMVIEGQSSLPMARFWGAGQTASSDGQFFPTTRQGEAMNLIN AKYGHEPGLKAYTHVSDQFGPFATQTIPATVNEAPYILDGLLMTDAGQKIREQYADTG GFTDHVFAVTALLGFQFIPRIRDLPSKRLYLFDPASCPKELNGLIGGKIKERLITTNW PDILRSAATMLTGVMPPSQLLRKFAAYPRQHELAVALREIGRVERTLFIIDWLLDADM QRRAQIGLNKGEAHHALKNALRIGRQGEIRDRTTEGQHFRMAGLNLLAAIIIYWNTKH LGHTVTQRQHDGLDCPAELLAHISPLGWAHILLTGEYRWPKR" gene 86796..87383 /locus_tag="RTM1035_00430" CDS 86796..87383 /locus_tag="RTM1035_00430" /note="COG1961 Site-specific recombinases, DNA invertase Pin homologs" /codon_start=1 /transl_table=11 /product="DNA invertase" /protein_id="jcventer:1101493006644_RTM1035_00430" /db_xref="CDD:32144" /translation="MTMTKIGYARCSTDKQDLTAQRQALHALGVSEDLIYTDHGLTGT NRTRPGLDQALAAVREGDVLIVSKLDRLARSVPDARAIAEQLEKKGVKLALGASVYDP TDPMGRMFFNILATFAEFESDLIRMRTREGMAIARAKGKLRGKQPKLSEKQQKELMRM HASGDYSISDLAELFSVSRPTIYRTLQRAGPKISP" gene 87483..88247 /locus_tag="RTM1035_00435" CDS 87483..88247 /locus_tag="RTM1035_00435" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="major facilitator superfamily MFS_1" /protein_id="jcventer:1101493006644_RTM1035_00435" /translation="MLPSPRPSEPRGVYDRTTRGIRIYLATPRLRGLLALNLAAAAAG AMVLVNTVVLVRGSLGLSESALAWTMFAFGAGSMIAALVLPRVLDVLPDRPVMFGGAT LMVATLVGLALTVLGAGLGWSILLTAWLLVGLGYSAVLTPSGRLLRRSAHAGDRPALF AAQFALSHACWLVTYPLSGWLLTVYGVVPALIGLALIAAFGMLAALKLWPSGDPVELE HTHDNLPLDHPHLRGHRRHSHALIIDESHPRWATHL" gene complement(88421..89470) /locus_tag="RTM1035_00440" CDS complement(88421..89470) /locus_tag="RTM1035_00440" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00440" /translation="MQYDIFYDPLVNAEGLEETSEDDLWFLPGPMDEEPDYLPPGPRA ELRETAVLDDWRKAEAGNAARLARVAGRIGALDDRLRRGPKGWRHRLALMEAADLSWF VGDRIGPDRLALWKSMRLSGVQDDTAALARVGWAVRRLTGGLGPEVDLSAFLDRRDPE NLGVEAEPFAERAGGWLDLMAQAADLHPVTRACMGFHLWSLAGLGQHGDRMEAAVTAA RIVASEGKGALFAPLAMGGAGGLRSGGPPADRLSRWLDGMETACLTAMRHLDDIEAWS ARAEAEMSPLSGRTPPALCAVLTEWPLVSAPMAEALIGASRAAIQRNLAWMEARGLIH EMTGQGRYRMWRVAT" gene 89715..90599 /locus_tag="RTM1035_00445" CDS 89715..90599 /locus_tag="RTM1035_00445" /note="COG1961 Site-specific recombinases, DNA invertase Pin homologs" /codon_start=1 /transl_table=11 /product="TonB-dependent receptor protein" /protein_id="jcventer:1101493006644_RTM1035_00445" /db_xref="CDD:40337" /translation="MPLIGYARVSTEDQTPLPQSQALKSAGCAEIHEEQASGGNRARP VLGRVLERIGKGDTLVVVRIDRLARSLSHLLEVIERLEAKGAFFKSLQDPIDTASPQG KFTLQVLGAAAEFERALIRERTKAGLASARTKGRVGGNPGLRARDPAALRKVRLARQD GYMERLNETAQDWVPQVRRLRPDLAWEDVVRIINGPLPEARRWTQSRLLRAVKAYVRD GFLPTEVLARAGRRETDDRLPAIIAGIKGADPDITLQAICERLESMRERTPRGRTRWQ PSSVRMLLERAERIGLLE" gene 90715..91878 /locus_tag="RTM1035_00450" CDS 90715..91878 /locus_tag="RTM1035_00450" /note="COG1373 Predicted ATPase (AAA+ superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00450" /db_xref="CDD:31564" /translation="MYMRQTHQLVQSALANQAAVVLLGPRQVGKTTLALDIASEQPSV YLDLERDADRQILTEPDLYLDEQTGKLVILDEVQQMPGLFKSLRGQIDQRRRAGFRTG QFLLLGSASNVLLQQSAESLAGRVRYIEMPPLQLTEVGTDQLNALWLRGGFPDSFLAA SDQASMDWRLDFLRTYLERDIPALGPRIPAATLRRFWTMLAHVQGGLLNAAALAEGLG VSGQTIGRYLDLLVDLMLVRRLQPWHENVGKRLVKSPKIYVRDSGIVHALLSIGTTEG LLGHPVVGGSWEGFCIETLLAATPAGTEPFFYRTSAGAELDLVLRLPGGDIWAVEIKR TTAPKVSRGFHTGAEDVKANRKLLIYAGERDVPLAEDIRAIPLEQGIGLLRAL" gene complement(92133..92321) /locus_tag="RTM1035_00455" CDS complement(92133..92321) /locus_tag="RTM1035_00455" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00455" /translation="MPPHSASLPYGERPATRCAKAVLFDLATGSMLISRSEIKMQIEP KPLTGSLSAPVKLMQPEG" gene 92724..94022 /locus_tag="RTM1035_00460" CDS 92724..94022 /locus_tag="RTM1035_00460" /note="COG1192 ATPases involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="replication protein a" /protein_id="jcventer:1101493006644_RTM1035_00460" /db_xref="CDD:31385" /translation="MVAVNKELTLRQRIKRTWSMRQCARFLNVSIQYLTKFANSSDDF PAGEYVGRERVFTLSELMHMRALLAASAKRPYDYLAWRKPDAPLPVISFASQKGGTAK SLSAAHFAQYLSLHYGMRVGVMDADPQSTITLYFVGGEGLPQMPDENTASMVDFAGLF QSEDAPYTDHDAQTLDSFFLKTSWPGLRLLPAHGETSEGEIQIARLVREAPAGKSFYR YLRDAIDRWKAGHPPKTLPNELVVDGKVDQERLDTALTETLDVIIIDYQPALTLFQLN NVIASTSLVIPQTMKGFDIATLSTFVTGLLGMLQHILAHERIEIGTGANMLLPTIVQR SNAQDLNHIGNLLEHCPTEILPVFYLRSDAISNASDVYQSVYEYEPDTPGKRKGINRF ITNADAVNDAIISRLWPGLERGYANTWMDEFYEDDGEGEA" gene 94019..95047 /locus_tag="RTM1035_00465" CDS 94019..95047 /locus_tag="RTM1035_00465" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00465" /db_xref="CDD:47776" /translation="MKRSIPRSLVSKATNLDTNKERASGSEGSTESSDAVSTPFKGAG SAWKSGALAQSQAAVERSRAELCLDILNGRHELSLSPDQISDPMGTDRRQDWMSQEAF RSLVNSIASNGQDTPILVWPEDPDWQPDPLDPSNIAGVPFVMLTGRRRLAAASELGVP LRAILAPPDARNAENSKFEMLFLRFRENEERENLSPFERLVSIGEMYETLASGEEKLT AVAFAKKIGVHESLVSRARSVFAAQDQILNTFKNVYDMSFRDLQGALASLERTNKAKP KPKTKTKPQKLTVKRKVGNRNLSVTSVDGNLSIKVAGVPIDQERLEKLGDLVANYLNV EDTEKDTD" gene 95275..96555 /locus_tag="RTM1035_00470" CDS 95275..96555 /locus_tag="RTM1035_00470" /codon_start=1 /transl_table=11 /product="replication intiator protein" /protein_id="jcventer:1101493006644_RTM1035_00470" /translation="MKHTGWRKPTPCLGVAEQLAQAGEQVAVPKTRAFVALKRVGAHI GLKAGDMMLLDTLGAFTQAQDWEEGQRPIVWASNAYLMEQTGFSLSALKRHARRLAEI GVISFQDSPNGKRWGRRDADGRIIEAYGFDLSPLSARVEEFEELHAELQAERELCQRL KRQITVARRMIRARIEAAISSALRGPWSQFTGLFEELLDRLPRRHEASEQLARLLTWF KDLQERVEAAYLKATEVVQTVENTPETKEQVSGKTQEMNPREVISEPHILITNQLNPV TSNSSEKEEAAGVVPNAEPEERVDRELEDWVAEVRKKRTALDLPTIMQACPEFASWAR NMGGFLKDWGDLHRVAGQLRPMIGISEHAWNVAQDRMGTQVATAAFALVFEKHSTGEV ASPGGYLRGMVEKAGAGELHLERSFYGRLNGQAA" gene 96914..97399 /locus_tag="RTM1035_00475" CDS 96914..97399 /locus_tag="RTM1035_00475" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00475" /translation="MKGILMQTGVLRVLRATAASWWRHKELRRSGQTGQAQRRERETV LCDLSYLKQAALLPNAHVICGEGGTFIHLGWTTVSTFAPIERFPLATLAVARGTPFID IRPVTDVIAFANLPRVAQDESVDPEPWGPGRSASLTTYIDMVEALGGRIANDPRPRQS T" gene 97440..98378 /locus_tag="RTM1035_00480" CDS 97440..98378 /locus_tag="RTM1035_00480" /note="COG4227 Antirestriction protein" /codon_start=1 /transl_table=11 /product="peptidase M, neutral zinc metallopeptidases, zinc-binding site" /protein_id="jcventer:1101493006644_RTM1035_00480" /db_xref="CDD:33952" /translation="MARSRTPKFDASEVITNEIIRIIERGVLPWRKPWTAGGSCRPLR VGGEPYQGVNNFLLTMRTVMAGHSSPFWMTLPQANALDAKVRKGEKSSVVVYYGQSRR DAGDEHDHSDGDDHSEEARIFRFQKSYRVFNACQIEGLPDSFYPDPEPAPEHPPSEPI AHMQAFFDAIDITTVFTGTEAYYLPPVDKVYMPSITRFQDPRNFYGVWAHELAHATKA PHRLNRDFGFSKFGNTSYAREEIVAELTSVFLGQTLGFTAHTLEMNAAYLHNWLRVLR SDKGAIFKHAADAQRACDYLIARSEAGRAGRSAKAA" gene 98402..98611 /locus_tag="RTM1035_00485" CDS 98402..98611 /locus_tag="RTM1035_00485" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00485" /translation="MSCKEPKTLRVACFKDGRRKIITFKRGAYWWSSSEGAYPLSAAL ETIKENGGWVETIPNPNYRPKGLFG" gene 98699..99088 /locus_tag="RTM1035_00490" CDS 98699..99088 /locus_tag="RTM1035_00490" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00490" /translation="MAMTVQPQPDRPDSTVIAAQNDAFRKLACLGVPPAQPIQGRMHV TRALMEAGDGFMAEAVKATGEFATFEPENDPEGWHDFGAVEIRGETVFWKIDLYEADS DFRYGAETPDNPATTMRVLTIMLARDW" gene 99245..101227 /locus_tag="RTM1035_00495" CDS 99245..101227 /locus_tag="RTM1035_00495" /note="COG1475 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="parB-like partition proteins" /protein_id="jcventer:1101493006644_RTM1035_00495" /db_xref="CDD:31664" /translation="MTTSFAPLTVAIGDLVPHPANVRSNAPETYDPENIAHLKASIAV LGLLQPLLVQKLDGKYAVLAGGRRHAALKELVADKASKGFMAKTKVDCRLVPDDCDVT TALSLAENITQAPMNAIDEFEAFARMMEVDGQTPETIAKTFGTTVAAVKGRLRYGLIH PDIRAAARGKVITLDTMKAFAEHPSQEAQREVFEALTKDGGYLQAYTVRQALKSRGVQ VSDDIGAFVRADYEARGGAVAADLLEEHSVLEDAALVETILLEKLGAAAEEARTRLGF AWADAMVRYDYATMADYGRVYPGPIEPDEAAQKRVDEITAELEKLQLEMEDEGLEDGA YNALYDRVDALEEEARDLQEAYSAEDLARSGVIASWQGGQITLHVGLVRPEDTVKEEG ARGSSASPTGEEAPDPGEITYPASLAEDLKTERAMALGAAMALHPEATLDLTLFKLVS DVLASGMSVTQAIKIDARKEYRNHAKMDEIDETSLEQVAAAHDALDLSWLDDTRPPAD QFAAFRALEAGEKAKLVAFATASTTQSCFARDRQRDSLMHALEIEIMPDIRAHWTPNA ALFNRFKKAWLLRILGEDLGLAQEAVTLASSSKKEIVAFCDKLFAEPFATLTDAQRAA VAAWCPPMMQTAGVACDEAEPAAEAPEPDSEVAQAA" gene 101300..101893 /locus_tag="RTM1035_00500" CDS 101300..101893 /locus_tag="RTM1035_00500" /codon_start=1 /transl_table=11 /product="predicted regulator" /protein_id="jcventer:1101493006644_RTM1035_00500" /translation="MAILKFSASAVAAQIAHARDCKTFLPNWNGPVDRPALILIVGNG VHLRSNGIDGTTTRIVTTEQADPSFAFADGMNPFRDTDWMAQRRMAFRDLTGQFYTDI LDDVQVLIDRGRGAIRLATDGHSIRVFVRRASDYLIGGTYEVPSGLGGTFRVILKDAC DTFAIVQNCGNCEDFDAMQPYRVPLDALMEIDGRRAA" gene 101996..102649 /locus_tag="RTM1035_00505" CDS 101996..102649 /locus_tag="RTM1035_00505" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00505" /translation="MGWLFYTDRRVQTYADEKAEIARLCTFESDTRKTELIKSCKVGS TWYAAARVTSIDGTPVEDTTYVTDADGSITFAAVFLTRYDDGCWGYKDMEESAGPVES RAPLSLLALLSELKDPDSYAHAWRQRCQDWAAIPDYEEGDKIKLAAPVTLTDGSTCQI VTATHYRRGRQKRRCYRIEETGGLVRLSKASLAGSELLSSAKGAASPVLAEFLAGRN" gene 102774..103100 /locus_tag="RTM1035_00510" CDS 102774..103100 /locus_tag="RTM1035_00510" /note="COG2002 Regulators of stationary/sporulation gene expression" /codon_start=1 /transl_table=11 /product="htrA suppressor protein sohA, putative" /protein_id="jcventer:1101493006644_RTM1035_00510" /db_xref="CDD:32185" /translation="MTALAQDVSKLTDRYQTTVPAGVRKQLKLGKGDQIRYCTEPSGR VYIEPVRSDEEDPVLGAFLDFVEADIKAHPDRIRAFDGALHDRLAALVGDVDVDLDAP LSLEDE" gene 103097..103615 /locus_tag="RTM1035_00515" CDS 103097..103615 /locus_tag="RTM1035_00515" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00515" /translation="MSGDSVPAQAPLVVNGWSIYAHPLFLDQLEGLIEEVEARKARDP KTWRKKNPTKRLAAIFKLVTEAIPADPGAAAFRQGGTLGDHRKHWFRAKFFQQYRLFY RFNSDAKVIVVAWVNDDKTLRAYGSKTDAYATFKGMLEDGNPPDNFDALLKEAAAAGK RFETSLEAVPDR" gene 103710..103874 /locus_tag="RTM1035_00520" CDS 103710..103874 /locus_tag="RTM1035_00520" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00520" /translation="MIEAENDRQHLGLEEQCAPDLTGHRFPIAVHVADMPDDLGKLLD IGLEEHFRGG" gene 103864..104016 /locus_tag="RTM1035_00525" CDS 103864..104016 /locus_tag="RTM1035_00525" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00525" /translation="MAADVNSYDAWFCAQVQAALEDARSGTSQVQVMQAAQALIDAKR EVEPKS" gene 104118..108380 /locus_tag="RTM1035_00530" CDS 104118..108380 /locus_tag="RTM1035_00530" /note="COG0286 Type I restriction-modification system methyltransferase subunit" /codon_start=1 /transl_table=11 /product="putative methylase/helicase" /protein_id="jcventer:1101493006644_RTM1035_00530" /translation="MSKPRTANPALAISEADLASALAQIGTEVDDQPLRSSALARIMR ETFHGSDAGGAWDWRIAYDMMQAAAVQVVLRGNGVADDIAAAKLLASRLLTETRRSEQ QIRLQQFSTPLPFAALVLRAAAIRKGDTVLEPSAGTGALAAFAARAGATLVLNEIDPF RQSLLRAAFGGDVTGHDGEHIDDLLQAPVLPDVVVMNPPFASSVDRSRDKHIAAKHLI AAAKRLAPGGRLVAIMPPGFTPERDAAHWSRACGLLTPRLALTMPGQVYRKLGTSVET QLMVFDKVQEGGEMIRATLCDLDEALPFVDAVAATRTEMSPAQRVEAIPHARPTVRSF VPRKTAAGVITAPTARANAVRPLSFTSLQTPRNNMPISDIYARYRPQRIEIADAQEHP TPLVESIAMASVAPPMPSNTGRDDLRLPARLIEEGHLSEAQLETIIMAHDAHRRDLPG RFAIDDDQTKLTRADDDPNARAYRLGYFLGDGTGCGKGRECAGLILVNWLAGRRKAIW VSKSATLIEDAIRDWTDLGGSPADIQPLSKWKPDQPVPMGDGILFVTYATLRSAGKCG TTRLSQILDWMGAEFEGVLAFDEAHAMQNAAGSEQGRGVKPSQQGLAGLRLQLAAPRA RVFYISATGATSVHNLAYAARLGLWGQGPEYPFPSRESFVSAMEAGGVAAMEVVARDL KTLGLYTARALSFDGVEYDVLEHALTPAQIKIYDAYAGAFRTIHHNLEAALTATGVND ASGETNASAARASAKSRFESTKQRFFNHLLMGMKAPTIIRAIEHDLAAGHACVIQVVS TGESLLKRRLETMDSDDELVEGALTPRDYVLGYLEQAFPIHAQKLVEIDGSMVAEPLR DETGALVVSREALALRDAAMMELMTLAPIPAALDQILWAFSDEAVAEVTGRSIRPLKA EDGHLFIEKRAASSNSSETQAFMDGEKDVLIFSDAGGTGRSYHAAQTAKNQKRRRHYL LEPGWRADAAIQGLGRTHRSAQVSAPFFRVCTSDVHGEKRFTSTIAKRLDQLGALTKG QRETGSQGMFREEDNLESPIARAALRGYFADLAAGRAEAMSYESFTDWTALRLIDMDG VLLEELPPIQRFLNRVLALPIHMQNALFAEFMRRIADQTERARAAGTLDLGVETLRGE KIEQVSTEDLWTCPKSGAVTRIIGLEVTDPVHVLGAKEAMSRNPDKLPMVNRASGRAA LISARPMQMYDEDIVTLMRKAVRPNGSSYLEEARFESSAWEEIDRPEFAQIWDAEAAS LPKTTTTKLYLLTGLLLPIWKDIPTTNERIYRVTPDGATAMIGRTLSEEGAASLRARF LVSNPQTPQEMLTAALGTTAPVDLGRGLTLTRRRVAGEMRLELGGADRGMIDGLKALG CFTEIIAFQLRVFLPHGDGIDTGSILARIVGQRVAKVAEQAA" gene 108501..108887 /locus_tag="RTM1035_00535" CDS 108501..108887 /locus_tag="RTM1035_00535" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00535" /translation="MTNPQIDYAAMAAQWRAERETTLKASRTELLAQLRALGISEVTA EYEGYGDSGNVEDVTVQPAEVQLPEALATEVGDFAWSLAYHHHPGFENNEGGYGTLTW DLRNDSITLDHADRYVECSHSYDEGL" gene 108889..109350 /locus_tag="RTM1035_00540" CDS 108889..109350 /locus_tag="RTM1035_00540" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00540" /translation="MAHPLHHAESSARKFGGVPSDYQAVHDWFDASKEHLALFTHRAL RHHAQGLFEAERVFGLTLTNSAGRDIPVRWIGEQHVREDCQGRIPSMADWQRRIQPEP WMANGHIDRHSGDEPCGDPRVAWASEVAAGRTVLGLKDWKAARATRATQSA" gene 109451..109753 /locus_tag="RTM1035_00545" CDS 109451..109753 /locus_tag="RTM1035_00545" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00545" /translation="MTLNDIKAAVDAGQTVHWANTGYIVHKDRLGQYLITYQPNGSCI GLTDRSGHRLNGKEVEFFIGRSKDSAENPGSQSRPDGQGRGVAPGGAGAFPLGRQL" gene 109878..110606 /locus_tag="RTM1035_00550" CDS 109878..110606 /locus_tag="RTM1035_00550" /note="COG5489 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="ParB-like nuclease" /protein_id="jcventer:1101493006644_RTM1035_00550" /db_xref="CDD:45185" /translation="MFAGTLTRNVETAAAEYTGMIHSTRFDIAIQLEARAKMSERSPD FDVTAINKSGRKVRVGTAWNETGNTSGNPYISMQIDVGLGPFRVNAVQTKEARSAQSG EFEIIPLVSNGLMKSGSISGELTAMDADNAFTGYIANMMFDLEFMLIENSYKSEETHP DYRIEVSSPRGTPIRVGSAWMAKSSRTGNDYLSLLINTPDGDLRVNAVQNEEQRGGQT FSIIPFIDSGEQPQDAGAGLSLVA" gene complement(110980..112359) /locus_tag="RTM1035_00555" CDS complement(110980..112359) /locus_tag="RTM1035_00555" /note="COG3673 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00555" /db_xref="CDD:33471" /translation="MGGSRPDQRLSNVYKMYRAMRPGPDSPINPKDQVAFYDPGLGTG ESGGLFGRVKPILESAVGTGIDHNIIDCYEQIIAHYEPGDRVLLFGFSRGAYTVRALA NVMNLCGIPTEMPDGKPVPRHGPGLRKIAKDAVKFVYNHGAGKPRGQNPYFKHREELG RRFRQKYSSAPQEGDENQGNVQPTFIGVFDTVASLRTAVVRTLVWGITFATGAAFVAG LVLGWSLLLVIPLGALLGALIWQLGSLLLDNFKYFADDPDRKLKIWRLTDWPQILKTG HFAAWNKRNYDMWLDPDVNHARHAMAIDEDRADFPRVGWASKKAAIETKDREPAWLKQ VWFPGCHSDIGGSYPEAESRLSDIALDWMIDELKECVPSIKINENYLNRAPDPLGLQH REDAIVRLGPISIPWKKGIREVGDDFPLHPSVQERMQATAVAQFGEVKPYRPQQLSKR RDLKRFYET" gene complement(112432..113013) /locus_tag="RTM1035_00560" CDS complement(112432..113013) /locus_tag="RTM1035_00560" /note="COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00560" /translation="MKTMPPDYDIAFEDQVRECFGRVVYTHKTHERMADRSADTLRRY KMAQIALSALTSAGAVGVVVGDETWVEIVTVVISFLTLFVAAYLKNFDPGAIAQKHRD AAAKLWNVRECYLSLLTDLPRLSHEVAVERRDELQAMLAALYEGAPQTDGKAYKEAQR RLKEMEDMTVTDDEIDCFLPLSLKRSGGRPKQK" gene complement(112994..114319) /locus_tag="RTM1035_00565" CDS complement(112994..114319) /locus_tag="RTM1035_00565" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00565" /db_xref="CDD:31932" /translation="MGISDDFKTFLDNIKIDNAATIALRYGEVTASLNKEFRDTESKT ANSLQVGSYGRWTAIKGISDLDMIYIMPAGKWDTYKEEGQNRLLHDARDAIKRRYPST TVKVDRLVVRVLYNDFHIEVMPAFKLADGSYKYPDNAKGGSWKITKPQAELDEMREAN ERKNRNLRHLCKMARAWKNKQGVAMGGLLIDTLAYNFLESTDEYDTKSFHYYDYMCRD FFKFLADQPKQSEYAALGSRQRVRVKKRFERKAKKAYDLCVKAIDASGQKNERQKWRD VFGNAYPAPVRSAAGEAAAFAHVFKNTEQFVEERFPVDIRYHLRINCEVTQDGFRPGM LRDLLERHGVLLPKKSLRFFIADATDLPDDAEVFWKVLNRGEEAERRDMIRGQIVRDE GRGERRETTNFRGDHLVECYAVSRGVVVARDTVRVPIRVRDAEDEDYAA" gene 114803..115132 /locus_tag="RTM1035_00570" CDS 114803..115132 /locus_tag="RTM1035_00570" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00570" /translation="MDAFSRLAEDWELSTDEQITLLGSPGRSTFFKWKKSGGNLPHDT IERISHLLGIYKSLQIVLPNPEAADGWIKKPNAFFDDRSALDVMLGGNVVDIYKVREY LDAQRGG" gene 115113..115859 /locus_tag="RTM1035_00575" CDS 115113..115859 /locus_tag="RTM1035_00575" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00575" /translation="MHNAVDDFDVKQINGVFYVLIPSRFPPVPLYQRIAGGRDDQVAA VADLHNPRVMEKQRLLGQGCVTADDVSPRFQNWNHAPFAYSNPEGSWFFDRFVRCLEM SQDKQTALAVSVAKRALFLSRTAEAPIGLDMRMLSRKVSGAFLDLRALPVELCQSERR KLGKLLWERAKTEGLSGVLFRSFERPSGTRICVLDGNVLDRAIQGEHFRYSWDGEKVS SLYAFDNSGGDEDNSIDPRDLGQDEDILAA" gene 116598..117527 /locus_tag="RTM1035_00580" CDS 116598..117527 /locus_tag="RTM1035_00580" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00580" /translation="MAYDTANTYETIELFGLTEKDAQLPIPEDHILTDHIIRESFEAL LGQLRGTGLEAEIEPLAHGLATILQRRKVALGKEVDRTADKIGALAKSHDGSEIAETA LEEAQARFVQLREIVGAIEVMSEAAAECYEVETGHAFIPAAGSRASVRAQETGAVFEA RQLLEQHDRETAEKSKVEGVPLIVSGATDWTDVDVIFNTLDKVRERIKQNRNEEIFLC HKGGKHGAEMIAARWARARGVAQARFDPRWSAHGRAAPFKCNDEMLDDKFAATGVVLF GGNGVALNLGQKAEAKGLTVMRVADPVKKTAET" gene 117628..118677 /locus_tag="RTM1035_00585" CDS 117628..118677 /locus_tag="RTM1035_00585" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00585" /translation="MRAKQNLEMIGMTPLSSIAMSAYTDLVRLLKDDALSGVEGKPTL KERGDKAYWYAARRVGTEMRFIYIGEDSDDTRARIDRIEELRATAKDRQAERSRLVRL LRAEGMTPTDRATGSILSAMAAAGTFRLGGTIVGTNAFRLYEGELGIRLPIGGMANTG DIDIAQFEKLSVALQDQVDPGLAETFSALKFDPLPALDQGRTWRWAQGGSGQLVEFLT PAFGDETIRDLPALGVNAQGLNYLNFLIAEPIHAAAIYRSGILVQVPRPERYAIHKLI VADRRRDGAGSLKSAKDREQAAFLIEAMAEDRPDDLARAYAAALEVGPRWREHIGTSL KRMPETKLILGGLGV" gene 119319..119525 /locus_tag="RTM1035_00590" CDS 119319..119525 /locus_tag="RTM1035_00590" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00590" /translation="MTNHYVATVPVKFTDTDGQERTRFQRVGAMFRNTRNGDGSEFFS LKLDFPVAVSELVMFPPSAKDPQD" gene 120079..120636 /locus_tag="RTM1035_00595" CDS 120079..120636 /locus_tag="RTM1035_00595" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00595" /translation="MEIVREAAEGVSTSVLAERFGVSVRAIQYTLKADAERQTDAAIP VSAVSVKVTAAELAALDAVLEKAGIESRAEGLRRLIQAAGGVFVPDAQMAAEMARYRA SLHEVGNGVTQIAKQMTQANRRGQGAVGGTSAEFTELRLAQMRGLARFILDSADEIDL LLRRRRDAMQLEATAALREFAHAAE" gene 120623..122956 /locus_tag="RTM1035_00600" CDS 120623..122956 /locus_tag="RTM1035_00600" /note="COG3843 Type IV secretory pathway, VirD2 components (relaxase)" /codon_start=1 /transl_table=11 /product="Relaxase/mobilization nuclease domain" /protein_id="jcventer:1101493006644_RTM1035_00600" /db_xref="CDD:43358" /translation="MRLNDAVHAVTGEVFRDGWSRVRGSMQGLHVAKQTQLVRAAAGH RPAVFKAIRGGGTHTKSQLANQLDYLTTKSTHIVDSSGFLDGKAKLEAGDIKDLTERF AKRWDAGFKPKLGQTTHMLMSFPVGTRGVDVRDIATDVAERFFQSDEGHFDYIIAVHE DRDHPHAHLVLNRRSQEGEFFFLGRNHRFNYDDFRLAMVEEAEKYGVRLEATRRVDRG VVHYPARTSEVYDAKEEGRAPRERERVGQDLTRTLAEIANTRTVYHSLAAEASREARE DIAAALFRAGEVLARSGQVDRTGDVYMAEDQSFEDLRSLYAEKLARVQGMIAEKSDAE RPVLEKRLIEIQTQVQHMQPLGLRSSTLSETPSEGGIYSEANIDASQRERLAEPDLRS RIDAALRGTGISTSEVVARIETGASNAALEHQWIANDLSKVAEARDLNLERRADLEQA RDILNDVHVELGTLLERENVLRRDGVMEAEPISERFHYHRDAVRAMEGTIRQEMRADG LTAQQIEDRDWEVVSRAERRIETEQRAYLVAHPELLALPGDVIDRSEPYRETITDVAR ASEITREVDRIMEARDLRTPVADAVTDDLRARYPDMPSHLARGLGATYAAVVEIRDTE AINQVRRETEMRDGLGSGTRDALLAARGETAPQSDNTDRLADEIARVLDHERAGELSA PFETEADREAFREEIARLLDDRQLDRLTSGDADALEKVLEDRLDRLYVAKVYLQSDAA TANTEALRQVVDDLADTEYEKHRATDVDGETERGQVH" gene 122965..124965 /locus_tag="RTM1035_00605" CDS 122965..124965 /locus_tag="RTM1035_00605" /note="COG3505 Type IV secretory pathway, VirD4 components" /codon_start=1 /transl_table=11 /product="TRAG protein" /protein_id="jcventer:1101493006644_RTM1035_00605" /db_xref="CDD:33308" /translation="MGKARIATGVLLVTLVTAAMGYTIASAVLTYQDLGFGAEIDFAY IAQNYLAILDRRPEDAQLIHLIIGSFAAAGLMLSLALSGSALTRFGQTHWQTAREMKA NGFFGAPGTGFILGKLGTPGSRANYICSKVFPHALIVAPTGRGKTTGFVIPNLLTWQG SAVTLDVKGECFEATARHRAAQGDKVYRFAPTDWEGKRTHRYNPLLRIFELKDPARQQ MELQLLATLFLQSDNDRVQGLLKGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQ KEYFARGHEVDNRAAKLIFTRLASTNNDTLTSYVSLLMTSGLDQWQNPAIDEATAVSD FDFRTIRKKPFSVYLVVQPLMVKPLAPLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLD EFNRLGKMPIVVESIETLRTYRGHLAVVTQTIPALDEIYGENTRRALQGNAGVKLYLT PSDEKTVEELSKAVGKTTKTVITRSQSIGKNPFEGRSQSTRTEESSLLPEDEARRLPL DEIVMVIDAQMPVRAKRIQYFDDRLFKAIHATQTGELPFPEPGGGGPQGNLPLSVRAM PMTPPANGPSGSDAVVETTRQEAGSQTSGQTDVAPKKTAPVVYAVVAEEQRQMEMDFG GRVADAETVGVDDEAQVRSAVDGLDEMEAILQEGDGEKLVAR" gene 125035..125244 /locus_tag="RTM1035_00610" CDS 125035..125244 /locus_tag="RTM1035_00610" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00610" /translation="MKTDYRDAAKLAKLRQIGELIAFRAVLFGYRTPLELTKMECKKI KARRTIHRAFSLTSSGFREDYSGVI" gene 125477..125974 /locus_tag="RTM1035_00615" CDS 125477..125974 /locus_tag="RTM1035_00615" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00615" /translation="MRNPDYLANELLTEFESSGERDLLTIAQRIFDDREPDLRRLPMV RYLFGAFEPLDNALAILRAADLIRIKRDGVPGVKIREHLYLLTTAGEDALGRISAAAP ELSWYRDRACIVARVAGAQGGKALKDRQYLQAEYAGTELSHTIQPITDRVLARLAAIL ERLDE" gene 126058..127641 /locus_tag="RTM1035_00620" CDS 126058..127641 /locus_tag="RTM1035_00620" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00620" /translation="MADRPLRPAPTLTIRRIAFRGEKRGTAQGAIDFDWSELTAGVWA VTSQRNLRGKSTVLEILLWALRGRPKGLQDDVRRWLSSVCVEFDVDDQRYVVEFAVDE RVPRGSLARRRPSGETDELDRFMSDEGFEAAMSRFMMNTLDLDPVTAMQGKEDERKVV EHGWAALSGGLYFGGDHKQLLGDVQMGGLPARMLQMYIGIPWATTVMQASTVKRELEQ EAEKASKAATAAAKDAEIARARIDGELQAAKKILDGFAQVTGTASEIERLAGEVARLS PIALDLAQRLARAEAETTELERLATGDERAVRDLRENIVATQFFNGLKPVCCPRCETR VSNERLKRESADLSCSLCAEEIPIDEMEGADDGLDAIEQRFAAAKAAADRARANTNAL SVKSKSSSDELENARRELTKAATSATFEERRKAELDVARLEGALKERQTPARPVIVSS DVTLINAAHAEADKAYNAGRGDILERLNTEILALGQRLGVQMLEEVKLNTNASLRLTK GGESTSFSKVTAGERLRWL" gene 127716..127880 /locus_tag="RTM1035_00625" CDS 127716..127880 /locus_tag="RTM1035_00625" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00625" /translation="MSPDDLTAVLSELQAISRETVGLQIIIGSANASAIVDQLGEQWC RSATGDDYLW" gene 127906..129822 /locus_tag="RTM1035_00630" CDS 127906..129822 /locus_tag="RTM1035_00630" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00630" /translation="MSALDLLESRLASNQPITIDDLGGVDEILADADRLYAAPFLDIL AYMISAAPPTEGARLHDFLVDGFDAARDPQSFRDAIDQLIRSATLRAAMAQAVVAIFT RRIREHATEREALIAAYSLEGLFRLALEGDVSRHRPLLELAEVAPDAPGPFAQHVAKI GGAAFHAWGDDDLLTMLHRLLDNEEAEGEAAFELGLAHLARALEGEDMATIHARLGTA RLLFERACEADDDRSDARAYRSAIDLVLGFAANRSAADMQETLADLVAAARDRAAVLR TGCVTPWLAPRQDVDLEWFELARTVQRAADDLARPSWINAATTMDRILAVYDASCTIA HGDGLRSMLRPRVEASFLRERGLAAHLDDLLSEGQWSDTQRTIAQHLRCRLDEAYRAG ALPGKAGENEQYPLLARILPKGTSTEQIPSDMVRALEAGLASHAARSTELANPILQRM LALLRDQLSDSSEYKGEVQRSFDAVLQQILIFCADRQNADIRDLGTRGDYLRVRDPSE ADLQSDLRDFLKGNLVGAEVLTEVRGVATGRTDIYISLGGPAFVIELKKHIGEFSPEA AKRYVAQATSYQATNVKLGFLGALELVDRSGPVPSIEECLWHSAYIPEGGALGRHLIV FRVPGRLKSPSALR" gene complement(129850..130254) /locus_tag="RTM1035_00635" CDS complement(129850..130254) /locus_tag="RTM1035_00635" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00635" /translation="MLTSTLQAYIGDVFLACSEKAFGRQLTEDERKDYAKTWSRWGNP SDENIIALFRRLGINDVFNGLSWQGQSTTTLKKKLRIMNQVRNKIAHGQDIMVDGQPY ALTLNSIQGWRRVVQTFGERFEVHALSKIIRD" gene complement(130817..131893) /locus_tag="RTM1035_00640" CDS complement(130817..131893) /locus_tag="RTM1035_00640" /note="COG3704 Type IV secretory pathway, VirB6 components" /codon_start=1 /transl_table=11 /product="TrbL/VirB6 plasmid conjugal transfer protein" /protein_id="jcventer:1101493006644_RTM1035_00640" /db_xref="CDD:33499" /translation="MSVVTYFVETSQAYLDTAAETQFGAVAATVGTLLVLGTTLVVIL VGINMIYQYRAMDGHTAFWLAVKIGLIGIFATNWMQFNAFSSAILYGIDSIAGALVAS VGGGSPGPSGTFAEEFDRLIAELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAA FILVASRLMIALLIGIAPVMIFLTLFEVTKDYFARWLSALISFAIYPIVVAGVFATIT GVSSALIGELGDPEGASNIGALIPFFMMVLMAKGFIVATPFIVRAISGNIMMPALSGG LGGGYSFARAAMGSQQAYNRYLIGGASGAEYAALRARQFFGVQQMPVRQGMGQTGSGG GTGSADSGSKMLAQLARLGRLGRR" gene complement(131906..132319) /locus_tag="RTM1035_00645" CDS complement(131906..132319) /locus_tag="RTM1035_00645" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00645" /translation="MRQAGCTLVLIALVLGLTSAPGFAERNLVPTLDRSFDVCPDRPA EPVWMQQIPLRQVYHRVLVQDIYRAQNLEQVVEIGNCDCATRFPSWDAAEAVFRERYA SNERWEMLQASDAYNRRANAARTAAKAICDAAGNW" gene complement(132316..132510) /locus_tag="RTM1035_00650" CDS complement(132316..132510) /locus_tag="RTM1035_00650" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00650" /translation="MKTFEYNILSFPMTRKTSLSDMQASLNEKGADGWEVVSISTSEF ANVGHTVFLKRETTPAGATA" gene complement(132507..133493) /locus_tag="RTM1035_00655" CDS complement(132507..133493) /locus_tag="RTM1035_00655" /note="COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis" /codon_start=1 /transl_table=11 /product="type II secretion system protein E" /protein_id="jcventer:1101493006644_RTM1035_00655" /db_xref="CDD:29996" /translation="MSLSYLETSLDRIDAAARGDVIEICINPDGTCWGEFQGDHFMRA LDQRLTGVQVRDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMS ISLRFFSSLPLEGIALDFLYGKERKLEDLRVEKKRALRAVVAAGLIDDALAFCVENKL NMIVSGGTSTGKTVAARKILSHVPSEERIVTIEEAAELLPTQPNAVTLIANRDAEFQT ADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAI AALKTEIPITYADMIQYIENSIDVIIQAGRHDGKRGITEFYLPGATEIGTSP" gene complement(133498..134877) /locus_tag="RTM1035_00660" CDS complement(133498..134877) /locus_tag="RTM1035_00660" /note="COG2948 Type IV secretory pathway, VirB10 components" /codon_start=1 /transl_table=11 /product="conjugation TrbI-like protein" /protein_id="jcventer:1101493006644_RTM1035_00660" /db_xref="CDD:43663" /translation="MSDTENTELEKRLAALEKGSARAPIAAQRRSPLLALIVILVIGA GGALLYLLSQPDEEEALPTATPDVFQNEGDGFGAIETLPPPEPEVVFVGPDPVEPNAE LLAQITALQAQIEELRNAPEPVVEEDTAAAEAIDALTAQIAALQAASEAAQQRFQDEL TARDRSLEQLRMDLELAQLEASRPQPAPAGPTEDELRAREQERLRREEEARRMAELER RATEERAFQERRIASPTIAFGGPSGAAETELAQRSFGEVTDFVLNGALPSTVTQAEVI ANPSNTIIQGTMIQAVMETALDSSLPGQTRAVVSEDVYSVDGARLLIPRGSRLIGRYR AGVDIAQRRVTIAWDRIILPDNQTVQISSFGGDELGRSGVTGFVDTRFPERFGSAALI SLISAAPSAAASEVQDETAADVLEDVGDDLADATDSVIGDYLSIGPVIYVDQGARVTV MVDRDLEIF" gene complement(134874..135545) /locus_tag="RTM1035_00665" CDS complement(134874..135545) /locus_tag="RTM1035_00665" /note="COG3504 Type IV secretory pathway, VirB9 components" /codon_start=1 /transl_table=11 /product="Conjugal transfer protein TrbG/VirB9/CagX" /protein_id="jcventer:1101493006644_RTM1035_00665" /db_xref="CDD:43450" /translation="MLIALLPGLAFAEAIPRGGPNDNRVRLATYQEGQVYRLSVSLTH VTTIEFGEGESIRSIIAGDTEGFEIDGVPGGQAFAIKPVARGVHTNVTVYTNRRSYYF NVQEVRSPTFYVVQFRYPDDAARPTRAIAAQAPNYNYGASARTEFTPTRIWDDGTFTY FAFPRNAPVPAIFRYAGGRERTVNTQTPEDGVIRVSGVNRQWVLRLGEEVVCIEAIPP AEATS" gene complement(135572..136228) /locus_tag="RTM1035_00670" CDS complement(135572..136228) /locus_tag="RTM1035_00670" /note="COG3736 Type IV secretory pathway, component VirB8" /codon_start=1 /transl_table=11 /product="VirB8" /protein_id="jcventer:1101493006644_RTM1035_00670" /db_xref="CDD:33531" /translation="MVATEQEIIEEELVYGALRRERLWQRLGLIGLVFGIIGCLSAAA VSILDVDPPPVVVPYDPATGFALPEASVGASSVTANQAIIEAEVFRYVTDREVYNQLD NDLRIRSVLRRSDGAAESGLRQIWNSANENYPPTVYGPNARLDVEILSINRIGTNRAT VRLRKRLTSINGTQTGLFTTTLLFEFRPETRRSIDEVWTNPFGFTVLEYSVRSDRLEN " gene complement(136243..137055) /locus_tag="RTM1035_00675" CDS complement(136243..137055) /locus_tag="RTM1035_00675" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00675" /translation="MMGHLLLRTALATTLGVGLQFSALPPAAAQGVPVVDTQNIAQNI QQLRQMIEDEILQNEQLTQLREQLGLLTDQLAELQRTYEALTRLAELPEIIRTEMEDE LNGLLDQEFGDILATIEAIKTGDFSGLSGSGAGEIETQMDRVLADLGFDEDTLSEMAT SGNPGANRVATQATTGALVSAAAQNSYEDAGQSLERVDRLVGLIDDMDELKESIDLNT RVTAELAIALVAMWQLEAIQTVGDGTGGVIDAATIAEEQRFMDFTLPDLRAE" gene complement(137052..138140) /locus_tag="RTM1035_00680" CDS complement(137052..138140) /locus_tag="RTM1035_00680" /note="COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /codon_start=1 /transl_table=11 /product="Lytic transglycosylase, catalytic" /protein_id="jcventer:1101493006644_RTM1035_00680" /db_xref="CDD:29556" /translation="MPTNDNGLTARDIVETGDREADLAVQADKLAVRELIAEIEREQL ETLQRILDAQTSFGGQGLPAMVSGLESGSGDPARSVEAVYGTGEIDPNPGGEQMFGDA SETIEQLIIRVAQETSGFAGVGRAGLSPVQWRALLQALIWQESRFTIGARSPVGAYGL TQIMPGTASDLGINPEYYDSPYLQVHGGARYLATQLNTFDGNIINALAAYNAGPGRVF EYGGVPPFRETQHYVSVIPERYNLYLTRIGGIEALGTIDPALLANANLSLTGHGAAFY GNNSPAAIRQAALRIADIVERISETEDVQESVALNTYARAELVRLVAARIRLQAARTR VLSAEELAQASARMAEGAFMDFTIREIE" gene complement(138462..140837) /locus_tag="RTM1035_00685" CDS complement(138462..140837) /locus_tag="RTM1035_00685" /note="COG3451 Type IV secretory pathway, VirB4 components" /codon_start=1 /transl_table=11 /product="CagE, TrbE, VirB component of type IV transporter system" /protein_id="jcventer:1101493006644_RTM1035_00685" /db_xref="CDD:33254" /translation="MPRDDAHDPAIDPRTMTPDWYARETRLAHMLPYVSLVDGQTVRT RVNELFRCIRLEGINSYTTDDAYLDKVTALFARIVAQLGPEFSYYVHKVSKAIKPDLD PIREDSFAGEVDRRWRAKLETSGLRDKTLTLTVIHRPPPKSLLPHLGRSAPDRLKEET RKRLQRLGEAVNVFLSGLTELKPRLLSARSGELVGFLGALNTGTELPLYPANTYGFLS FNVANTRVTFHGDHFELSEGVVGHRYGKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHS FTPINSNLMAGRIKRQKRQMQASQDAALSLLEALDIAADDLEAKRQSFGEHHMVVTLF CDTLEELQALSAEIVNAAATEGVKMIGERVAAKAHYLSQHPGNQPKRVRASAVTNRNF ADFAAFHRTQLGKPAALTPWGRVVTYLPTPEQSAYRFSYHEQGSPDKEPTSGHTLIMG RPGSGKSVLSAFLMTQARRAGARIFVFDYRLGMEMAVRANGGRYASLNAGQPTGLNPL WTETDARGTAWLSDWLTTLLYRADKPLTPAQTNRIQEVVRQNAQATNPALRNWRDFAS LFVSTDDGGDLHQRLLEWTEDGRYGWIFGQSLEDTFSLKGDVVGFDLTGILDSEADKE RMAVLSYLFRRVEREIEDRRPTIIVIDEAWKALDNAYFAERLSNWLVTARKQNTVAVM MTQYASQLERTRTGKTIVEAVPTQILLPNIRAQPADYAMLNLTEKELDVLLNTGSNSR LALIRDDQGSIVVDADLSALGPNLTILGGMEKGEALVGADYRDRPDFWRLS" gene complement(140827..141105) /locus_tag="RTM1035_00690" CDS complement(140827..141105) /locus_tag="RTM1035_00690" /note="COG3702 Type IV secretory pathway, VirB3 components" /codon_start=1 /transl_table=11 /product="type IV secretory pathway, VirB3-like protein" /protein_id="jcventer:1101493006644_RTM1035_00690" /db_xref="CDD:33497" /translation="MAERSPLFLGLVRPPKLLGLPIMYAMVWLFGSVLLFVWVQHIAV LGFAALLYPVLWKAADWDPRFIDVMMTALQETPPTRNRSIHGGDSYAP" gene complement(141098..141391) /locus_tag="RTM1035_00695" CDS complement(141098..141391) /locus_tag="RTM1035_00695" /codon_start=1 /transl_table=11 /product="VIRB2 type IV secretion" /protein_id="jcventer:1101493006644_RTM1035_00695" /db_xref="CDD:46805" /translation="MKQISNLFVASLALFLFIAEPALAQSIDLSPIQSLLQGIVDALT GPLGVVIATLAVLGVFLSWFFNIIDLRQALWVLVGIAGVAAAPTIVAAVFAGG" gene complement(141388..142002) /locus_tag="RTM1035_00700" CDS complement(141388..142002) /locus_tag="RTM1035_00700" /note="COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /codon_start=1 /transl_table=11 /product="Lytic transglycosylase, catalytic" /protein_id="jcventer:1101493006644_RTM1035_00700" /db_xref="CDD:29556" /translation="MVLVMESDGSLIPSRSQSSFARNYNDGIGQGSASDGIAIFGEVE AEQEGVQVAALARPTPLPRADVLSGIQTTALRYAGHPGLRRAGLSVTDWLALYRANIE VESAYRQDAISSAGAIGLGQLMPATARDLGVDPRDPLQNLDGSARYLAMMLETFGDPH LALAAYNAGPDAVRQYGGVPPYRETQNHVARVMAVVARLEGSNS" gene complement(142046..142414) /locus_tag="RTM1035_00705" CDS complement(142046..142414) /locus_tag="RTM1035_00705" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00705" /translation="MNWDIEAPNVVTEARFRELVESGYSAEILCQESAHKKGPSYYGV WIMRIVSDDGVEKLLVTARTRTTYNDIKIREFKTISGVVSFFIGLGFAHVDLPLEAGT SRTHKLAPSDKAPSVKGAGS" gene 142658..142876 /locus_tag="RTM1035_00710" CDS 142658..142876 /locus_tag="RTM1035_00710" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00710" /translation="MAESCFAPSRPFLPSDSQAARDYADIIRGDFEDYIQDIQSYFRC LDSERARAFEEAREVSEDYGRFLQLVGD" gene 143001..143258 /locus_tag="RTM1035_00715" CDS 143001..143258 /locus_tag="RTM1035_00715" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family protein" /protein_id="jcventer:1101493006644_RTM1035_00715" /db_xref="CDD:28977" /translation="MAKTIRSTGQVALCQALVDARKSAGLGQDDLADRLKCHQSLVAR IESGQRRVDVVELVVLARAIGFDPFEVLAIVEAATEPDHRI" gene 143425..143649 /locus_tag="RTM1035_00720" CDS 143425..143649 /locus_tag="RTM1035_00720" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00720" /translation="MNENEVEGVAIANLIATDEETIVGWVYRWNTGALAIRWDIHGPQ RVSKIYPELCDADKAEIDFASLMQLPCRND" gene complement(143753..144142) /locus_tag="RTM1035_00725" CDS complement(143753..144142) /locus_tag="RTM1035_00725" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00725" /translation="MLGRKGSNAAWDNLVRADYALQLVKDRADIDISGPEFNFVRSIR VFDVRYARQHESGRDGDCNRSAAVVLGTYGIQGDFSWRVSSPAALPDAHAGLERWGEH CPSIYHRSVFVEWRDYSGNYGFEQVNY" gene complement(144943..145887) /locus_tag="RTM1035_00730" CDS complement(144943..145887) /locus_tag="RTM1035_00730" /note="COG1230 Co/Zn/Cd efflux system component" /codon_start=1 /transl_table=11 /product="cation efflux system protein" /protein_id="jcventer:1101493006644_RTM1035_00730" /db_xref="CDD:31423" /translation="MPHDHGHTHIDPESGDRRVSIAIWANGLLTVAQIVGGILSGSLA LIADALHNFSDMASLVIAFVARKIARRPADERMTFGYGRIEIVAALINYTTLILIGFY LIYEGGMRMIDPPEVAGWTVVILGGVALVVDTLTALLTYSMQKGSVNIRALFLHNLSD ALASVAVIIGGSLIILYDMRWVDPAITIGIALYILYLAFTEIGGPIRTLMLGSPPDID NAAVVEALRSVDGVADVHHVHLWQMEEHKAALDCHVVLTAGGWGKIEKIKAAIKDRLK EDFNIAHSSLEFEHEDRAHENADLYGHGKPEEEENRFH" gene complement(145877..146647) /locus_tag="RTM1035_00735" CDS complement(145877..146647) /locus_tag="RTM1035_00735" /note="COG1305 Transglutaminase-like enzymes, putative cysteine proteases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00735" /db_xref="CDD:31496" /translation="MAPTDSYLTATRLLDFDSPSISNLVRDRGWHDLARVDRIGAVYD FVRNVIAFGYNRVDDIPASAVLTDGYGQCNTKGTLLMALLRSVGIRCRLHGFTIHKAL QRGVVPELVYPLAPSEILHSWVEVETEEGWINLEGFILDAPFLQSLQKEFSETESLCG YGAGTDCLSAPPVSWNGGSTYIQKTGIVRDFGTFDAPDDFYLKYSQNFGFARDFLYRH VIRHWMNARVRRIRRGMLPKVPGLSRPNHSHEENNRAA" gene complement(146741..147475) /locus_tag="RTM1035_00740" CDS complement(146741..147475) /locus_tag="RTM1035_00740" /note="COG0785 Cytochrome c biogenesis protein" /codon_start=1 /transl_table=11 /product="Cytochrome c biogenesis protein, transmembrane region" /protein_id="jcventer:1101493006644_RTM1035_00740" /db_xref="CDD:42644" /translation="MFEISGVGIVAAFLGGAISFLSPCVLPLAPGYVSYIAGQPAAKS GAARSIAERARSVVLSLWFVLGFSTVFVALGAGASLLGGMLLRWKYELGLAGGFLIVL FGLVMMGAIKIPAMMRDTRPDVKVDGGSAVGAYLLGLAFAFGWTPCIGPVLGSILAVS ATSGADGMALLAIYSAGLGLPFLIIALFTNEIAGRLKRIGAAGRWLYRISGGLMVLMG IGVMTGQISRLAFWLLETFPALGTIG" gene complement(147555..147881) /locus_tag="RTM1035_00745" CDS complement(147555..147881) /locus_tag="RTM1035_00745" /note="COG1742 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006644_RTM1035_00745" /db_xref="CDD:42654" /translation="MTAVLVYPLAALAEIAGCFAIWAWWRLGASPLWLVPGVAALVAF GWLLAQVDTVAAGRAFAAYGGIYIAASILWMWLAEGHRPDRWDLLGTTVCLLGAAIIL AAPRGA" gene complement(147883..148311) /locus_tag="RTM1035_00750" CDS complement(147883..148311) /locus_tag="RTM1035_00750" /note="COG0789 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MerR family protein" /protein_id="jcventer:1101493006644_RTM1035_00750" /db_xref="CDD:29689" /translation="MLTIGTLAKRTGTKVQTIRYYEQIGLLPEPGRSAGGQRRYGDSE LDRLSFVRHARQLGFSLDAIRELLDLSDHPDKSCAEADAIARRQLKQVEQRMARLEAL RTELQRMVHECSGGHTADCRVLEVLRDHSECLTDHDEIGA" gene 148885..150987 /locus_tag="RTM1035_00755" CDS 148885..150987 /locus_tag="RTM1035_00755" /note="COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis" /codon_start=1 /transl_table=11 /product="Thiol:disulfide interchange protein dsbD 1 precursor" /protein_id="jcventer:1101493006644_RTM1035_00755" /db_xref="CDD:33957" /translation="MRTTLAGYQGLLISLALFLVFVASPVRALESNAYRSEVLTARLI VAEAGIAPGSQFLSAGLKIELEEGWKAYWRSPGEVGLPPEIDWEGSTNLESVDMLWPA PTRFRAFGIENFGYAKQVIFPLQLRLANSDRAAELKGLVDLLICSNVCIPERFELTLP VPLGTGVDAKAATDIATWAARVPVAGPESAIAVSGASLKQDQALVVQMTRPSGWNNPD LFPEFGAGSAFGAPDIRLTSDRTGLWASIPILALSEEQTSLRITVVDEGVAVTFDDVN TTDVVPAPPYASETSQDRGQFFPILLLSFLGGLILNAMPCVLPVLSIKFGSALRMKNR SLSQLRAGFLATAVGTVAFMWVLALAVIALQTLGYAVGWGVQFQNAYFLIALILVVGL FAANLFGVFEISLPSSWMVRLSGRFGRGYAEDFSTGALAAILATPCSAPLLGTAIAFA LSGTTGDILAVFTAMGIGLALPYILVAAWPGFLSRLPKPGPWMISVKIVLGLLLAGTV AWLCWVLIGVTSPTLTGLVLLGLGLIVLAARAYQVQPRNGLLWGMTAVLGMTLAAPAL LPKSSDDVTASITSYWVEFDRSRIAREVSQGKTVFVDVTADWCITCKANKTLVLDREP VLGALGEEGVIAMRADWTRPDAKIQSYLEAHGRYAIPLNIVYGPDAPEGIILSELLSA DAVLEALSAANLSAVRKR" gene complement(151087..152238) /locus_tag="RTM1035_00760" CDS complement(151087..152238) /locus_tag="RTM1035_00760" /note="COG4235 Cytochrome c biogenesis factor" /codon_start=1 /transl_table=11 /product="cytochrome C-type biogenesis protein" /protein_id="jcventer:1101493006644_RTM1035_00760" /db_xref="CDD:33959" /translation="MIWLVLGAMASITVLLFLSGLYRTGEVLNRKDGALVILKDQLSE IDTDQERNLISVTEADAARVEIKRRILAAGRLATRESSRASGRSTIFASAIATPLVAF ALYSQIGSPQIESQPLASRASETQEAANLSELTQRLKTRLEADESGGPSDGWVLLGQT YMRMARYDDAADAFERVTVRDNADISTLLLYAEALIAAENGIVTPQAESVIERASEMA PDDPGPIFYRARILEQDGVPDEARTLLIERLKRADRAYPWMELFLSVANRLGEQVGES PVTLADFFPDSRDARSPGAADIEAAQDMSVEERSAFVRSMVDRLAARLLDDQDNLEGW LRLAEAYSVLGDFDAAQNAADNARTLAESLPETDPMRAAATARLDRINK" gene complement(152235..152720) /locus_tag="RTM1035_00765" CDS complement(152235..152720) /locus_tag="RTM1035_00765" /note="COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmH" /protein_id="jcventer:1101493006644_RTM1035_00765" /db_xref="CDD:43835" /translation="MKSWLYSLVLMLSATTAAWAVEPDELLDDPVLESRARELSKQLR CVVCQNQDIDSSNAGVARTMRTLLRERLIAGETNDEIIAFFVDRYGDFVLFRPRLKPA TYLLWFGPAVLFAVGIGVVFVTIRYRSRAVLDGTADPLSPDEEREFEAIFHENEGRRD P" gene complement(152717..152953) /locus_tag="RTM1035_00770" CDS complement(152717..152953) /locus_tag="RTM1035_00770" /note="COG0526 Thiol-disulfide isomerase and thioredoxins" /codon_start=1 /transl_table=11 /product="periplasmic protein thiol" /protein_id="jcventer:1101493006644_RTM1035_00770" /db_xref="CDD:48559" /translation="MDKPADAANWLEELGNPYERIGSDSEGRVGIEWGISGVPETFVI DANGIVVYRYVGPIVTPEAQDEIRAALAAAGGQS" gene complement(153273..155264) /locus_tag="RTM1035_00775" CDS complement(153273..155264) /locus_tag="RTM1035_00775" /note="COG1138 Cytochrome c biogenesis factor" /codon_start=1 /transl_table=11 /product="Cytochrome c biogenesis factor" /protein_id="jcventer:1101493006644_RTM1035_00775" /db_xref="CDD:31333" /translation="MTPEIGQFALTLALAVAIVQSILPIVGASTGRVLWMESAKTTAV LQVTLVAIAFGALMRSFVVSDFTVRNVVENSHSLKPMIFKVAGTWGSHEGSLVLWTFI LVLFGAGVALLGRNIPVGLKARTLSVQAWISVGFLSFMLFTSNPFERVFPPPLDGTDL NPLLQDIGLAMHPPLLYFGYVGFSIVFSFAVAALIEGRVDPAWARWVRPWTLTAWISL TAGIALGSWWAYYELGWGGWWFWDPVENASFMPWLLGTALLHSAIVTEKRDTFKSWTI LLAILTFSLSLLGTFIVRSGILTSVHAFAVDPARGVYILGLLGVTIVGSLTLYAWRAP QLGSGGVFRPISREAGLLLNNLLLATATATVLFGTLYPLFVEAVTDEKISVGPPYFNA TFIPFMLPLVIIMGIGPFLSWKRADLPGIWQRLRLVFGIAIGVAGIVWYLQTDGPLLA VVSIGIAAWVFVATLREWALRIKLFDLPLSQSLRRARNLPRAAHGMTLAHLGVAMLVL GFVGSTAWKEERVLFAEPGTTVEIAGFEVIFDGVERLRGPNYIAQQGQLRVLKDGREI TLLRPERRNYPVAGTSTTESAIRSTLRGDLYVTISEPATEKASGQWNLRILYEPLVNW IWIGATMLVLGGSLSLSDRRLRVGAPSPKSRSSALQPAE" gene 155883..156449 /locus_tag="RTM1035_00780" CDS 155883..156449 /locus_tag="RTM1035_00780" /note="COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems" /codon_start=1 /transl_table=11 /product="probable lipoprotein" /protein_id="jcventer:1101493006644_RTM1035_00780" /db_xref="CDD:48517" /translation="MAGVAALVFIWLLLWADYRADISQAETEPPFLAQFELTDHMGMI RTEEDFAGRWMLVFFGFANCPDVCPTTLAEVAAVMDGLGEDAAKVQPIFISIDPERDT PMALADFVPRFDAGIIGLTGTSDQIAETAETFPIYFERIEEASAPDGYTMGHTSHLFL FDPQAGFADSWPYGTPAEEILADLRERI" gene 156455..156874 /locus_tag="RTM1035_00785" CDS 156455..156874 /locus_tag="RTM1035_00785" /note="COG1495 Disulfide bond formation protein DsbB" /codon_start=1 /transl_table=11 /product="Disulphide bond formation protein DsbB" /protein_id="jcventer:1101493006644_RTM1035_00785" /db_xref="CDD:31684" /translation="MTRLSGETALVLAWIIALISSLAVLFIGEVLGQTPCVLCWFQRA FMFPLAVVLGLGLWWQDPRVGRYGVALALGGAAVALYHIGLYVGLIPEAIQPCKATGP SCTDDNQVSSHSDSADALVAFTMIGVLSAISLKEKQT" gene 156871..157530 /locus_tag="RTM1035_00790" CDS 156871..157530 /locus_tag="RTM1035_00790" /note="COG1651 Protein-disulfide isomerase" /codon_start=1 /transl_table=11 /product="DSBA oxidoreductase" /protein_id="jcventer:1101493006644_RTM1035_00790" /db_xref="CDD:48572" /translation="MNRRGLVLSVLAVGAAGFGGAAWYATRPQPIAEAVPVAPEVNDV LIRPYSPILGPETAPVTIVEFFDPACEACRAFYPVVKDIMTEHGDAVRVVIRYTAFHG DASVEAIRVLEAARMQHVFEPVLEAVLREQPRWASHGTPAPGLILEIAASGGLDVEAA RTQMLAPGVVAVLNQDRADVEAVGVRQTPTFFVNAKPLDPFGEAELRRLVAAEVAASQ S" gene <157804..163436 /locus_tag="RTM1035_r01140" rRNA <1..5633 /locus_tag="RTM1035_r01140" /product="23S ribosomal RNA" gene <157804..159713 /locus_tag="RTM1035_r01138" rRNA <1..1910 /locus_tag="RTM1035_r01138" /product="16S ribosomal RNA" gene 159847..159920 /locus_tag="RTM1035_t01132" tRNA 159847..159920 /locus_tag="RTM1035_t01132" /product="tRNA-Ile" gene 160099..160171 /locus_tag="RTM1035_t01134" tRNA 160099..160171 /locus_tag="RTM1035_t01134" /product="tRNA-Ala" gene 163891..163964 /locus_tag="RTM1035_t01136" tRNA 163891..163964 /locus_tag="RTM1035_t01136" /product="tRNA-Met" gene 164273..164731 /locus_tag="RTM1035_00795" CDS 164273..164731 /locus_tag="RTM1035_00795" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00795" /translation="MKTGVFALPVTAFLLLIPGGAMAGALEKDTRVQCRSTGSCTIKD DHLATEKSDPYKVYGKPPIKHADRLAAARFYHVRDCLVPAEKRNDAPDLTQIDWRKMR SEAVIEVCLFRIFSSLGNPIAAKRWFEVRGLRRVKLYTSSGRAVREGRQV" gene complement(165001..167649) /locus_tag="RTM1035_00800" CDS complement(165001..167649) /locus_tag="RTM1035_00800" /note="COG0488 ATPase components of ABC transporters with duplicated ATPase domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00800" /translation="MKHNWAELYSAKTIQRWHLPEYQHLNPDYGEFRAPLLRWSEIDA SIKDADKLAMLVICCDVLVLDKAPTLRCPTFIFARVIEIGAKADLTFDLSDGTKLSLI IAAQRIVDAATGVPATLTLATVSLDAGGDLVEAETHIAADGSTTAYVMERGEERATKV AASAAALDFLAPGEPLAVMLTTTFQIACLLSTEEPRLAADQVMWVAALTARHPTSHML SSDCHALYKTLIQLMDIGAGALLVPHLDHEIYAEKSKACLALLHQRVQRYDALVEKAR TDEHWRDQVAITIADKQNEAELAANLRAQTEATCEQMRKARQIAAANLLECQTDLSDL MVDFQRGIKNWQRDETIKASIEIFTGVVDLVQQVGTIVASGGTLAAIPVIDNIKMLAG MSVDLSTRAAKSDKFEDVIDISWLFEDNDDGDPPEYTAENAKEDVISYFETRKADREA AQKEKSRQDKIKKGAADLKKAGISAGKDVKGIYDGIMRIVDIAEKAKKLEQQSEDFLV KAAAQVKTSFGAIAPIGLDVVTGGEDGWAQTELGLEEMFDKISDMMDKLGGGRAYRLA LRRLVLHGRTMSQTRLALAKANNDLADAILRERAAQASRRIYDGYLRDLSQSQARDTA LRQLAFGRVLDSKRSVYLAMEAFMRAASYFTLRPIDRSVLPRITDSVDAFSEAVMTHT GTWVTSIALGRSPGPMDVWLDVDLTLAAGAADDPDMVIAQSDARATDETQADGDDGPP ALAIMRSADGSVSVTIPTDHPRFNRWYRVRLDAVRVYADGVHSDGDLWIDIQTDGTYL DKTPSGGTARFVTQPFMRAFVYNPLDVAAMPTGDSATTGRFGEDFFKPTPFATWRFTI SRQDGRNLDLRALTKLRLNLRGSVMS" gene complement(167713..168885) /locus_tag="RTM1035_00805" CDS complement(167713..168885) /locus_tag="RTM1035_00805" /note="COG1196 Chromosome segregation ATPases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00805" /translation="MTDDSIETIDFTKPFEPLMSLIGREGSNRSELWQAWHFLQVYAN WGIRLPTSETDFKAIMGADALKFDFLPPMQDGNLLISKACEAFLKNVFSEVIQVGMDL KVYAETTAGGEDGMLQIILDSVEDGDTETALELLTDLQKDANSASTRAGNVKVALDAF RTELGKALGKLDTARTSLDSDSSTNEETLGILAADANTEGSIAYKHKMLEEARRLHTE ATIAAATSPTYIWVLPPLGLIATGVVMGIYTDKAIQRMKDIEELEDSIQKEGAHLKQA LAARSVFSQGSNGLANVISYSEAASAKCGVVQETWKGIASHISEMAKYLENTTRQSPD GENEVKSKRLLGVALRKVEKNWQTMLPDLSELMTDNYVSIAPGTATVAEVFKKLGG" gene complement(168916..169770) /locus_tag="RTM1035_00810" CDS complement(168916..169770) /locus_tag="RTM1035_00810" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00810" /translation="MRQGIDMTDSSPFQGVSELRSWVASGGVVRAGLPANFMSELLAS LSIFAVLANNLSESLVRIDARWRDMGGDNMLKASLGQLLVLLGDTVAESRHATQQAMS VKVAGNKVFGRIEREIATHGKQIREMTAAIQTSEERMEAAAKAAKEASDKLNAGDYIL HGLEAIFTFGQVDKNRDNLNKLNTSIAIHKGEAASQRQHRELLGVYKAELVALRNGVE RVLTVDQTMTQFQNDLVALGPLLLPAYQQIEKSEATSNLKVANIHLERARPKMDAMSR WIQTFAIT" gene complement(169830..169970) /locus_tag="RTM1035_00815" CDS complement(169830..169970) /locus_tag="RTM1035_00815" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00815" /translation="MIAQPAQHTVILPPLDGYQALSALFSGVLPPAKECVKVVDMTIH FT" gene 170415..171800 /locus_tag="RTM1035_00820" CDS 170415..171800 /locus_tag="RTM1035_00820" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00820" /translation="MISKLRNPSFVWLFAPLLALSLLWSNDAPAQTTGALPDYVIKEF GTPPKVPLGPPSKALRAAMQIAFVDSFTQSSWKEAQSDALIEIVRSEDPRLAWLISDM MRFVTNGSLNITLADAAADLLKVDPPAENHWEVITNTLIAWDIPAPPGYLEIKRTIFT SAVPGWERIFVEGDIDWRMVSWGGVLIGDRGFGQTDEPCNCIPAADNPKVSSAKAATW LDDDDIVFGIVVNGEARAYPRRIMEVREMVNDTLGGRNLGIPYCTLCGAAQAYFTDGL PAGTERPILRTSGLLIRSNKVMYDVRTFSIFDTFLGHAVTGPLAKRGLKLQQASVITT DWGTWRAAHPETTVLVEELALGRDFDFRNGRDANGPIFPVGDVDPRLPVHEDIIGVIA ASGKPVAFQRSAAMIALKRGEKIEFENVRLVLTAGGIRAVDARGADQGSHQAFWFAWS QFHPGTALWSG" gene 172307..172984 /locus_tag="RTM1035_00825" CDS 172307..172984 /locus_tag="RTM1035_00825" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /protein_id="jcventer:1101493006645_RTM1035_00825" /db_xref="CDD:31088" /translation="MRVLLVEDHPPLAEAVCDALRRSGFAVDHAATAADARELSGLSD YGLVLLDLGLPDGDGLRLLPTLRQGGRVPVIVLTARDQLADRLAGLDGGADDYVVKPV EMPELVARARAVLRRPGDRSDTTLRLGALSLDTAARSVSVNDAPIILGRRELGVLEHL MRNAGRVASRKVLEEAIYTIDDEVTPNALEAAVSRLRRALETAGCPVPIVNVRGVGWM LPREGSE" gene 172981..174318 /locus_tag="RTM1035_00830" CDS 172981..174318 /locus_tag="RTM1035_00830" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="periplasmic sensor signal transduction histidine kinase" /protein_id="jcventer:1101493006645_RTM1035_00830" /db_xref="CDD:30987" /translation="MTRPNRPLAQVLIRRLVLITVIIVVLNMVVVGAYYGSDRAELEA EVVADVTERLGARLEDSGLPADAPARAMFAKHPTAYAFALVDRTGTVVDAMNRALIPS SALDLYADDWVTAVDLPTGRLLYAGHEFRDRTDGLRMVFVMTSDPENLLRHAFLSELR QHVWGPILPMALLLIGASAFVIRRELAPVGRAAAWARTLSPGAVTPPPSGPVPSEVAD LIDGTQRALDRLASALAAETRHAAEAAHALRTPVAVLTARLDALPPGETTDKLRSDLA ALARTVQQVLAASRTEALSAPTEGALDLRRPAEAVLSALAPFAYSKGVDLSLSLPDTP VLARANDEAVQLALTNLVENAVLHGGPGEVEVTLGPGPRLSVRDHGPGLPADAGERIF QPFWRAPGAVAGGTGLGLAIVDRLQRAQGGTVAVQKPKGAGLEIVLTFEASIF" gene 174403..174549 /locus_tag="RTM1035_00835" CDS 174403..174549 /locus_tag="RTM1035_00835" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00835" /translation="MNDGNDVKKMDLRESRKWLSGEVEIRLPKAWLAIGAAAIAVLLI VALD" gene 174587..174925 /locus_tag="RTM1035_00840" CDS 174587..174925 /locus_tag="RTM1035_00840" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00840" /db_xref="CDD:43992" /translation="MKFFAIAALSVTLATQAAFASQITPIADVQRGTMVTVQGIVERI TDEDEFRLTDASGDIRIYVGPNWVPAEVGETVIVNGSVDDDLVFPREIYARSLTRADG TVITFDRRYD" gene 175136..175663 /locus_tag="RTM1035_00845" CDS 175136..175663 /locus_tag="RTM1035_00845" /note="COG3932 Uncharacterized ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="ExoD family protein" /protein_id="jcventer:1101493006645_RTM1035_00845" /db_xref="CDD:45947" /translation="MARFAGPRTYALILLIFALPEALPLPVAGLSTILAIPLILVSVL MLLFGPEPRLPVWLSERRVPLRLLKMGSTRIGQALNRLERVSRPRWPGLIGQTRVIGA VCLVLAVVIALPIPFGNMLPALCILGIAVGMLQRDGALVAGSMTAGGLVVTALSTVIA LAGEAVLAVVREVLV" gene 175825..176406 /locus_tag="RTM1035_00850" CDS 175825..176406 /locus_tag="RTM1035_00850" /note="COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00850" /translation="MGAFFWRAKALAAFVLLLWVVQVVNWITGYGFNPAFGLIPRHVS GLDGIIAMPLLHGSFSHLMANTPPLLVMGGLLVATATRALLAVNAVVIGLGGGLVWLF GSSAIHIGASGLVFGWFGFLVARGLVDRSPITLGAALLVGVLYGSILWGVLPGQPGVS WEAHLFGAIAGAAAAFVIRTQVHAPRLGDVNLE" gene complement(176944..178233) /locus_tag="RTM1035_00855" CDS complement(176944..178233) /locus_tag="RTM1035_00855" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="periplasmic sensor signal transduction histidine kinase" /protein_id="jcventer:1101493006645_RTM1035_00855" /db_xref="CDD:30987" /translation="MTPGSIRARMLAWSAGLTLGALVVAWFAISAVLADFVNRRLNAD LTAAARGVMAAAAWDAAGAFAVLPPPADPRFDRPLSGWYWQVSDGTAALARAPSLVTG NLGADGAGRTGPDGAALVAHVARFTAPGDGRRLTVTVTLPAAEVVAELAAIRRPLALA LAALGAALLAAQVLAVRAGLVDLTRFARAVAAVRDGRGETLPPAQAAELRPLSDELSR LIAANAAQVARARAHAGDLAHALKTPLAVLANRADPEDTALIDRMDRIIRWHLKRARA AAAGLDPTAHAAVAPVLEDVALVLTPEARRRGVKLEIAAKGAPDFRGDAEDLAEIVGA LTENAVKWARSSVRLAAAPCPDGVQISITDDGPGIPEPDRARLLARGARLDETVPGHG LGLAIATDRVAAYGGRLDIGQSEGGGLAVTLTLPARG" gene complement(178230..178898) /locus_tag="RTM1035_00860" CDS complement(178230..178898) /locus_tag="RTM1035_00860" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="two-component system, regulatory protein" /protein_id="jcventer:1101493006645_RTM1035_00860" /db_xref="CDD:31088" /translation="MKVLVVEDDRDLAAQIAAALTQAGYTVESAHDGETGEFLGATET VGAAVLDLGLPGIDGIEVLKRWRGAGLTFPVLILTARDAWSDKVAGFRAGADDYVLKP FRMEEVTLRLSTLIRRAAGHATAELAAGALMLDTATGLATLDGMPLRLTAFEGKLLRY LMLHKGRVVSRTELSEHMYDRDADRDFRSMEVVIGRLRRKIGEARVETRRGEGYRLLP VDPE" gene complement(178895..179194) /locus_tag="RTM1035_00865" CDS complement(178895..179194) /locus_tag="RTM1035_00865" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00865" /translation="MRYALVPLILALSATPALADPPGDAVPIDAGAALACVADRYRGE ALRIEDEEDGLVQEIRWLTPAGNVLEIEITGPGCRFLEVDGVGQSEARILPEEPR" gene 179305..180123 /locus_tag="RTM1035_00870" CDS 179305..180123 /locus_tag="RTM1035_00870" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00870" /translation="MKRTLAALILTTALATPLVAQETPLSGTVAEIFGTQIVLTTPEG RLLVTLPEGATVPTPGTRLDLTGTRTGDTFAAATLTAGPAADPAEAMLPAALRGLGLT DIRSRPDDDGETYFYARSGTGWLRAEARGARLLEVQVDGAGLPPALIDAMLPATVRAE PRLAEIARLTEIDLDDDGEISVEGFSAEGMRIEIEFSRNGTLREYDRELDDRRSLSEA AARDRLAALGYTDVGFIERGGRHVTALAINPFGDTVEVRLDDQGRVARERLWQN" gene 180549..181487 /locus_tag="RTM1035_00875" CDS 180549..181487 /locus_tag="RTM1035_00875" /note="COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="glycine betaine/proline ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006645_RTM1035_00875" /db_xref="CDD:32296" /translation="MQLKIATALATTLAFSTASFAQDVVVGVPNWPSVTVTANVIKQV VETNMGLKVELQTGTNPVIFEALDKGSMHIHPEVWLPNQQGLVDQFAAKIELNSNSTS AVQGICVNQAALDAGIVDISDLTDPTKAALLDSDGNGKGEVFIGATGWASTTVEKAKA HGYGYDLVVDLVELDEGVAYSQLDTAIAGAKPWAGFCYKPHHLFTVHPEMTFLTEPAY DAAKWNALTPEEDADYLANSNVTMAWPPAFIQPVFAKDMEANAPQVAALMRNIDITAD DLGAFSYSVVIDGKDAGAVAAEWITANPDRVAAWLK" gene 181567..182598 /locus_tag="RTM1035_00880" CDS 181567..182598 /locus_tag="RTM1035_00880" /note="COG4175 ABC-type proline/glycine betaine transport system, ATPase component" /codon_start=1 /transl_table=11 /product="glycine betaine/proline ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006645_RTM1035_00880" /db_xref="CDD:48327" /translation="MADPVIELSGVWKIFGTAEQAALADAKAGATKAEVLAKHNCVVG IADASIFVMPGEIFVIMGLSGSGKSTLVRHVNRVIEPTSGDIRVLGQDVRALSPAALR ALRAERIGMVFQHMALMPHRSVQDNVAYPLELRGSPKGTRWQVSAEKLSLVGLQGYGD RLPRQLSGGMQQRVGLARALAADPEILLMDEPFSALDPLIRRQLQDQFMELSHKLGKT TLFITHDLDEAIRVGSRIAIMKDGRIVQTGTPEEIVTRPADDYVRTFVQNISKLGLIT ARTVMEPLISFPHFDVANASYAPTTANLDALIGLCSGSTLPVIIQDGGVPVGIVTKDR LLTAIREGR" gene 182598..184082 /locus_tag="RTM1035_00885" CDS 182598..184082 /locus_tag="RTM1035_00885" /note="COG4176 ABC-type proline/glycine betaine transport system, permease component" /codon_start=1 /transl_table=11 /product="glycine betaine/proline ABC transporter, permease protein, putative" /protein_id="jcventer:1101493006645_RTM1035_00885" /db_xref="CDD:33916" /translation="MEANLIPRFTGPSAPYYTRAFAAIQSRSGFVLSFNPAAALLGPI WAGMRGMSFLFLLLCFLDLLALNQIVSGLGGNTNSAEAARISQLQDTIATRRVEATEA IAAGDTDTATRATKLADNLQKAVDAAMAETASLTDGASTRVVQGVILLLVIRLATGFF ANAIYERRYTAWRGDQTLPHGAPPLRGAVTLALASLIYGVTLYARIGMPPDWLTTFPA DKTLFSDTAAWFDAGFEAAYASGQGFFDGLRNSIRILVEALEIVLVGTPWPVIMLVIC TLAWQLAGPRIAVFTAAALAYLAFYGFWELSMQTVALLGAASILCIVIGIPLGIWFAR SKTAFAIAQPILDFMQTMPAFVYLIPVIAFFGTGKPPGIIATLIFGMPPVIRLTTLGL TGVAEDVKEAARAYGATEWQVLRGVELPLAKASILAGINQTILMCLSMVVIASLIGAQ GLGSVVLTSLQYAAKGQGLLAGLAILLCAMVIDRIVQGSFRKRE" gene 184111..185109 /locus_tag="RTM1035_00890" CDS 184111..185109 /locus_tag="RTM1035_00890" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006645_RTM1035_00890" /db_xref="CDD:30928" /translation="MSDVTRLPAELTFRGLRVFVALEEAGSIAGAAQRLGGSSSGVSQ HITALEAAIGAKLFDRRAKPVTLTPAGQVLRAHAHRILSVVSEAQAELAEISLTSLPQ LNLAIIDDLDASLTPVLVSALQKRFRKCFVYAFSGRSDQIIDRLQTREADIGVTALLP AESTTFQSVPILREAFILLTAKGAIKPGTDPREALARLPFVQYSETMPIGQKVAQHLK RVKLNVPRRYAFEATRSVLAMVVQTGGWTLTTPLNLLDAERFIPMLDVLPLPFAGETR HIHLVARAEELGQLPEALARDCRRILRNVLVPRFEAIVPGFEGAIEVAEDEPQTEA" gene complement(185287..186705) /locus_tag="RTM1035_00895" CDS complement(185287..186705) /locus_tag="RTM1035_00895" /note="COG5598 Trimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase MttB" /protein_id="jcventer:1101493006645_RTM1035_00895" /db_xref="CDD:46144" /translation="MSEADMVAIYQTALRLLSDLGVGEVPEILVKPFLAAGATFGDGR VFFPQDMVKRAIGMAAKTFTFHGRDPARSIEVGGDAVHFGTGGAAVLTLDIDSGGYRP STLRDLYDFTRLQDTLTNVSWFTRCCVATDLPDIYDLDVNTVFALMKGTTKPVATSFT IHEHVAPIMRMVDIGLGGDGTSGLFHATPFLKTHISPMISPMRYGEDAVMVTLACIEH GIPLSCITAAQSGATAPATLAGFLAQSLAETLASLIMVNVIKPGHPMVFSNWPLVVDL RTGSFVGGGGEISVMNAASAQISNWLGLPSGVASSMTDAKVPDAQYGAEKGISSLAAA LGGGNLIYESSGMMASLLGASFEAFILDDEMHSLIYRTLRGVEVSEETLGYEAICEAV LGPGHFLGGTHTIAAMQRDYFYPTIADRDAPVTWEEKGRPDAWGRAKLAARRVLETHH PSYLAPEAEARMRDEFPIQLDP" gene 187003..189423 /locus_tag="RTM1035_00900" CDS 187003..189423 /locus_tag="RTM1035_00900" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase/aminomethyl transferase" /protein_id="jcventer:1101493006645_RTM1035_00900" /db_xref="CDD:30753" /translation="MKSTTRVVVIGGGIAGCSTLYHLTQEGWTDVVLLERNELTSGTT WHSAAQVTNFGMTQTMVGLKSHSISLYKELAADPDYPINYHHGDGGIRLANSETTMDG YRHFASQAKVMGVEFEILDAAECARRHPLITTDRLVGGLWDGEDGDIDPAQLCQALAR RARKAGAEVYRNTPVTGLTQLKDDSWIVHTDQGDIACEIVVNACGYRVNEVGAMMGVH HPVMSMEHQYFLTEPIQGIIDFGKRVPLLRCPIDDFYSRQEKQGLLVGFYEQDCRTWG MDGVDPHFVNALCPSDTDRVLPVLENVFKRMPALEEVGIHTIVNGPITYTIDGAPLVG PIPGKRNAFCIIGLRAGIGEGGGHGWLLAQQIVHGEAQYDTWVIDPRRFTTHANVELC ALKAIEDYQNEFRFHLPHEHRPAGRPMKTTPLTPILAAEGAEFGVVNGWERMAYIKPS PDFHETHGFRFNEAFDVVAAEVRAVQTGVGMTEVNGFNRFEITGPGAQDWLDTMFCGR MTRKVGKVGLGYLLNHHGMVKGEATLANIDDGTIWYGSAAASEYHDMDWLTAHMPKDG SVSIRSLTNDHTILVLAGPKSRDVLAAASRGDWSATAFPWLSVRRAFVGIAPAVVMSV SFSGELAYEIHVPNAQLYAAYLALRKAGEAHGLRLFGSYAVESMRMEKGYRHWKADLV TEFTPFESSLGRFVKMDKPHFIGKAALEKMIAEGHRRAFVSMVLDATHATAHGGDAIL CDGRVVGSVTSVGWGHRVGKNIAMGFVEPAFAAEGTALMVEVIGVPTQATVVPECLYD PENLRVRA" gene 189392..190375 /locus_tag="RTM1035_00905" CDS 189392..190375 /locus_tag="RTM1035_00905" /note="COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /codon_start=1 /transl_table=11 /product="probable transcriptional regulator" /protein_id="jcventer:1101493006645_RTM1035_00905" /db_xref="CDD:34583" /translation="MTQKTCVSGPSPKENGPKLVEILLAQGFVATELAIAFDSFRIAN RLAGRELFRLQIVSVDAANTLTSLGGMEITVTPMDSTTNLPDLLIVTGGSEMARALRR FLPRLQRVRNAGGLAVVLSDAAQALLTAGAAETAAVHWEGRPMLEEAGIAERGTNTLF NRSGNLVTSAGMAATADVVLALIAEMTSLVLMRDVGRVLLLERLRMAESEQPQGLSDL ASLPDGPLRKALKAMETNIEFPQSTAEIAQSINLSARQLERLFARHLGKSPQAYSRDL RLHRARTLIEGSSLSLTEIALSCGFEGSAHFSRLFKQRYGMTPIMLRSYGL" gene complement(190394..190597) /locus_tag="RTM1035_00910" CDS complement(190394..190597) /locus_tag="RTM1035_00910" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00910" /translation="MIEGADPTRNIYLSVGSLTELIKKAANEAIPDAAQVRMRAGGYS NFSFCDLATDVGLKGGLSLGVGE" gene 190725..191630 /locus_tag="RTM1035_00915" CDS 190725..191630 /locus_tag="RTM1035_00915" /note="COG1231 Monoamine oxidase" /codon_start=1 /transl_table=11 /product="amine oxidase" /protein_id="jcventer:1101493006645_RTM1035_00915" /db_xref="CDD:31424" /translation="MILPKVIVIGGGLSGVTAARALHRAGIDVQLIEARDRLGGRILS VDDSGNSSGPFDLGPSWFWPGMQPDFGHFVNGAGVTSFAQSDTGDLLFQRGQGSVQRY SGMQQEPTSMRMGGGTAALVSALARDLPADAIRLNTCATHLALTATGVDVTTEGGSLS APHVLLAVPPRLLAAQIAFDPPMPASVLRLWQGTPTWMAPHAKLVVVYDRAFWRDAGL SGAARSQSGPLVEIHDATTATGQAALFGFVGVPAKPVCRRVRRLSSPPLSSSWNSFSA RMRPGPKPRFTRTGPPIRSRPRLTT" gene 191489..191800 /locus_tag="RTM1035_00920" CDS 191489..191800 /locus_tag="RTM1035_00920" /codon_start=1 /transl_table=11 /product="putative amine oxidase" /protein_id="jcventer:1101493006645_RTM1035_00920" /translation="MQAGAAAVIAASVQQLEQLFGPHAARPKATLYKDWAADPLTATP DDLTAGDHPSPNPGPWVEGAWQHRLTLIGSETSRTEPGYLAGAQEAAEAGAAALLARL L" gene 191922..192311 /locus_tag="RTM1035_00925" CDS 191922..192311 /locus_tag="RTM1035_00925" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00925" /translation="MKKIILTSMAAAVALSTGARAQDCDPSAATAAGVIEIVQFRLAE SVEREHFVAAAANTMLALCAMDGFIGRVLSEGEDGMWMDHVRWTNSEAAKTAMAGSME NEALTPFIMSIDPNSMVLSYHIPLVLK" gene 192316..192621 /locus_tag="RTM1035_00930" CDS 192316..192621 /locus_tag="RTM1035_00930" /note="COG2378 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00930" /db_xref="CDD:32525" /translation="MRRADRLFDINQVFRDGKLHTGEQIADRMGVSLRTIYRDIETLA GAGVPIVGERGVGYIMSDPVFLPPLNITQSELEVLELGLALVAASFEHKMRPVGSVA" gene complement(192618..193175) /locus_tag="RTM1035_00935" CDS complement(192618..193175) /locus_tag="RTM1035_00935" /note="COG0450 Peroxiredoxin" /codon_start=1 /transl_table=11 /product="alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen" /protein_id="jcventer:1101493006645_RTM1035_00935" /db_xref="CDD:48519" /translation="MEDTMLIPRQTAPALTVPTLDHGPFNLATATPQRGTVICFYRGL HCPICATYLTELDKQTPAFAERGIETIAISADGADRARAMADKIGATALRFGHDLPLP VARDWGLYISTSRGKTSIGIEEPALFSEPGLFIVNTDQSIYYLSVQSMPFVRPSFREL LGAIDFAIEKNYPARGEYTGSLGTA" gene 193202..193990 /locus_tag="RTM1035_00940" CDS 193202..193990 /locus_tag="RTM1035_00940" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006645_RTM1035_00940" /db_xref="CDD:34583" /translation="MGFMTVDVPNFVSDRPILRQDRLSSLMSALRPVATPCAADDPRA ALVLTSTLLVLFTRPPNTPEPGALVATRLECALPLAQVLHGSPARLAVARENCPGLAA LADVLVAEAQSGRCGSQLAMARLFEAMLVLVLRRAIDAGPPDPGLLAGLSHPRLHRAL IAIHAAPARPWTVEMLSAEAGMSRSRFMADFSDCLGTSPLAYVTRWRLGLAHIALIQG ASIPVAARSVGYGTTAGFRRAWLRHFGDIPLAAVGSGPAEHPIL" gene 194235..194858 /locus_tag="RTM1035_00945" CDS 194235..194858 /locus_tag="RTM1035_00945" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase-like protein" /protein_id="jcventer:1101493006645_RTM1035_00945" /db_xref="CDD:48109" /translation="MKIYDVEGFPNPARVRIALAEKGAFENVSFIPVDVMGGEHRTEA FKKINPDAAVPCLELDDGTRISQCNAIIEYIDGEFENGPSLTGENHRERAVISMMNIR AETGLLNAVGNYFHHATPGLGPKLEVYQNKDWGLKQRDVATNTMAYLDEVLSKNAYVA GDKFSMADITVFAGLAFADFAKIEIPANLTNLAAWRKKMNARPSIAA" gene 194894..195562 /locus_tag="RTM1035_00950" CDS 194894..195562 /locus_tag="RTM1035_00950" /note="COG3806 Anti-sigma factor" /codon_start=1 /transl_table=11 /product="anti-sigm factor, ChrR" /protein_id="jcventer:1101493006645_RTM1035_00950" /db_xref="CDD:33600" /translation="MELNADFSKRVVVHSNALEWQASPMKGVDRRMLDRIGGEVARAT TIVRYAPGSKFSAHTHTGGEEFIVLDGVFQDEHGDFPAGTYVRNPPTTQHTPGSEPGC TIFVKLWQFDMNDRNQFRKNMADELAAPVDGVATAILHEDARETVTYRHLDAGASLAL DAEGGLELLVIGGEITENGNELHTGSWLRLPDGGSLHAVAGANGAKLWMKTGHLVYAQ PPAV" gene complement(195863..195964) /locus_tag="RTM1035_00955" CDS complement(195863..195964) /locus_tag="RTM1035_00955" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00955" /translation="MKKVMPSELPEKQFAHHVCGAEPPLIAEISTPD" gene 196100..196645 /locus_tag="RTM1035_00960" CDS 196100..196645 /locus_tag="RTM1035_00960" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family protein" /protein_id="jcventer:1101493006645_RTM1035_00960" /db_xref="CDD:31500" /translation="MFKSRAEQILDYAEREIRKNGFDGVSFRDIAEAIGVKSASIHYH FPTKAELGAEVTSRYANRFIDSLGAPDDPSETASDRLLRLADGYIEAYRVESSTCLCA VLGSIATHLPEGTSDAVRAFYNRLRDWLSKALAGNKTTLTPNLVVALFQGAMVLSLTT GDETPLLEARQHVVSCVAQIA" gene 197081..198475 /locus_tag="RTM1035_00965" CDS 197081..198475 /locus_tag="RTM1035_00965" /EC_number="5.4.3.8" /note="COG0001 Glutamate-1-semialdehyde aminotransferase" /codon_start=1 /transl_table=11 /product="glutamate-1-semialdehyde 2,1-aminomutase" /protein_id="jcventer:1101493006645_RTM1035_00965" /db_xref="CDD:30350" /translation="MHVIQELRMPGRLNESRLAEILTRESAAFASRTAGSAALLETAR GVMPDGVPMAWMAGLYRHRPIFVAEGFGSCFRDVDGNTYLDFNHADLSNTIGHGENAV TRRIARQAARGMQFLLPTEDAIAVSQLLRNRVGLPMWQYTLSASAANTEVIRIARAFT GRQKIVLFEGKYHGHIEPTMAEGGAPGANADAAPDGMGISARATADTVNVPFNDIPAL ARALQDGDVALILTEPALTNCSLVLPEPGFLEEAYRLAKAAGALFALDETHSWQFAYG GLIRAHGLSADFVTLGKGLGSGMPLGAYGMTAELGGFVERHRDVDVAQVRGLAIGGTT YGSAITLAAARAVLEDILTEAAYARVAVLGARLADGIERIITTHGLPWRAFRYGPRSG FCLAPELPRNLDEALPSLDQAFSDARRVFMANRGIWEAIASAGPQVSFVHTEADIDRY LEVAEDFIAAVSAD" gene 199175..199420 /locus_tag="RTM1035_00970" CDS 199175..199420 /locus_tag="RTM1035_00970" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00970" /translation="MLGTDNSVRILGLPIHYFIAITLGSLGVLLWSMVWCRYANQLED EIEAENAGFFHSRETGLEGSGVQGKGPDALALTEGTK" gene 199417..201057 /locus_tag="RTM1035_00975" CDS 199417..201057 /locus_tag="RTM1035_00975" /note="COG4147 Predicted symporter" /codon_start=1 /transl_table=11 /product="Na+/solute symporter (Ssf family) protein" /protein_id="jcventer:1101493006645_RTM1035_00975" /db_xref="CDD:33899" /translation="MTPADWQLQNIWLGLGITSAVFGLYYAVALFSKKKTANATDLYL AGRSIGPFVNSLAASSTWMSVATFLGVVALIQQLHLPFVYMWVQLILSVPLLVMLYGA SLYRMEVFTSVHFVQTRYGRSTAFLAAGWMLLIMLMYMVGQFIGIAKVFEVLLGLPYT PSLILSALVITGYITIGGMKGATYNDAIQMVIMMIALLVPLAAILKAMGVPGFWFPPL GYGSLTDTLLERIPTFFDLKFEARFYVALFVALTIGTLGLPQLAQRVLTSENIKSARR VVPWFCLWVGLMFLGTYALGFAGVYHFALIGQELTPEAADKTTLLLNLAYNPDWVSAF VIAGVLAAGVSTIAGLMIGVATVVGHDIVGVLRPHLTEAKQLRYGYLALAGTGVVSLL VSLDPPAFLITSIFWAFGMCATAITPMVVLGVWSTRINSWGAFTGSLVSGATYILLSP YVLPDFSVGTGLVAKLGFATALISVPVGFILTILVSLAAEKLKGEVAAQERYTAQELV EKMHGWAQVTRTRYDSSEWLLILAALWAPILLWGLVPW" gene 201036..201554 /locus_tag="RTM1035_00980" CDS 201036..201554 /locus_tag="RTM1035_00980" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00980" /translation="MGLGAVVNATIFTESRWQAVLGLPTAGLLWSFATFLAHSEQVEA LGVAKSEALFYVALGGMAQTLLLWLGFTVVIWAMTRAFGGRVPLLRLMTLVSASSLAL WVGAPAAAFWINGAPGHTAIAATISLISMALFLHALTRGLSADLHWSFLRAAGAVSAA SVFLASFAFLAL" gene 201586..202359 /locus_tag="RTM1035_00985" CDS 201586..202359 /locus_tag="RTM1035_00985" /note="COG1011 Predicted hydrolase (HAD superfamily)" /codon_start=1 /transl_table=11 /product="putative 2-haloacid halidohydrolase Iva" /protein_id="jcventer:1101493006645_RTM1035_00985" /db_xref="CDD:31215" /translation="MTIDAFVFDAYGTLFDVQSVSQITNQEFPEHGELITQVWRLKQL EYTWLRSMMGSYRSFWEITEESLNYTLNAIGVTAEKAVRDRIMDKYLHLDPHVDCLTA LDALEGVPLAILSNGNQEILDALVSNSGLDAKLQSVISIDKAGIFKPHKDAYELVEAV LKVKPENTIFVSSNAFDACAAKNFGFRVAWIERVTPEALAEEISSAAVVGPTTMFKLL RMQMESFGMEPDYRLKSLNDLAGLIDRADKAAAPASLRA" gene 202620..203201 /locus_tag="RTM1035_00990" CDS 202620..203201 /locus_tag="RTM1035_00990" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family protein" /protein_id="jcventer:1101493006645_RTM1035_00990" /db_xref="CDD:31500" /translation="MGRHREFDEKKVLDGAIEVFWRRGYSGASIQDVCDAMGLNPGSV YAAFGSKHGLFLAVIRRYLDSMNRPGLELLETNPCGLDGIRAYFDFIANGIVNGNRRW GCLGTNAFVELKEVDDDVAQLMLDHLTRLEIAFREALKRDSFEHPESQAKYLLCIAQG LNVFAKTSPNRETLQTIIDASISSLVSPRLAAN" gene 203461..204048 /locus_tag="RTM1035_00995" CDS 203461..204048 /locus_tag="RTM1035_00995" /note="COG3758 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_00995" /db_xref="CDD:45854" /translation="MQTLKFGALIDVPWKNGGGVTRSIAKGLYLDQPAWTLSRADVSQ DGPFSDFAGMVRILTVVSGGTMTLDTPTSSIEARTWEPIRFDGGLKVYARLANGPLTD LNLMFDPQSCEGEVLTRRGPLIGDLTRPDHGLMVLHVLSGAPEIDGVAVATGDTVFVT TPNVALTLTEDAALLEIRLTYLDQSKAIRLCIAER" gene complement(204009..205346) /locus_tag="RTM1035_01000" CDS complement(204009..205346) /locus_tag="RTM1035_01000" /EC_number="3.8.1.8" /note="COG0402 Cytosine deaminase and related metal-dependent hydrolases" /codon_start=1 /transl_table=11 /product="atrazine chlorohydrolase" /protein_id="jcventer:1101493006645_RTM1035_01000" /db_xref="CDD:30056" /translation="MLATGWASNVRLDVSHGRITALETDQKTKQGDTTVDTLLPALAN LHSHSFQRAMAGMTEFRMAGKDSFWTWRDLMYRFTAHLTPEHVEAIAAFVFLEMQEAG YASVGEFHYLHHQPGGMPYEDLGELSARIAAAAAATGIGLTHLPVLYTYGGAGQMALT AEQARFGNSVDRFNDLVARARGAIADLPKDCRVGIAPHSLRATSPDDLKTVLAAHEAG PVHIHIAEQPQEVADIQAVLGARPVEWLLANAEVNADWCLIHATHMTDAETANMARSG AVAGLCPITEANLGDGPFNGPAYLNAGGAFGVGSDSNVLISLTEELRTLEYSQRLRDI ARNVLVVGEGSVGETLYCGAAKGGAQALGRGTGDISVGAWADLVAVDSEAPALCALKE HQLLDGLVFAAKDEIVTDVWSAGRHAVKQGKHIHRDAITAAYRSAMQSLMALL" gene 205425..206663 /locus_tag="RTM1035_01005" CDS 205425..206663 /locus_tag="RTM1035_01005" /note="COG1228 Imidazolonepropionase and related amidohydrolases" /codon_start=1 /transl_table=11 /product="imidazolonepropionase" /protein_id="jcventer:1101493006645_RTM1035_01005" /db_xref="CDD:30039" /translation="MKFQQRWPEMTENGKVFVNLNLASLCDSGPKYGWIEDAAVVVVY GLIDWLGSREALPSLYNSFPQIDLGGRVVTPGLIDCHTHIVHGGNRAVEFEMRLNGAS YEEVARAGGGIVSTVKATRAASDEELLTTALARVDVLIAEGVTCIEIKSGYGLDIETE LRMLRVARAIGHKRPVRVKTTFLGAHATPADYAGRDDAYIDEVCIPALRAAYAEALVD AVDGFCEGIAFQPAQIARVFHVASSLGLPVKLHAEQLSNIGGAKLAAGYGALSADHIE YLDEAGVEALAQAGTVAVILPGAFYTLRETQAPPIALLRKHGVPMALATDINPGSSPL NSLLLTLNMGCTLFRMTPEEALRGVTQNAARALGLSDAGTLAVGKRADMAVWNIKHPA ELSYRIGFNPLHSRIFGGTL" gene 206660..208198 /locus_tag="RTM1035_01010" CDS 206660..208198 /locus_tag="RTM1035_01010" /note="COG2986 Histidine ammonia-lyase" /codon_start=1 /transl_table=11 /product="histidine ammonia-lyase" /protein_id="jcventer:1101493006645_RTM1035_01010" /db_xref="CDD:28771" /translation="MTTLTLTPGAVTLDHLADIYWNEASVRLDPASHSAIERAHARIA KAVAGTDAVYGVNTGFGKLASVKIASKDTTTLQRNLILSHCCGVGPAISRRETRLLMA LKLLSLGRGASGVRLEVVAQIEEMLAKGVTPVIPAQGSVGASGDLAPLAHMAAVMMGH GQAEYLGKILPGAEALAAAGIAPLVLGPKEGLALINGTQFSTAFALAGLFGAWRAAHS ALVTSALSTDAIMGSTAPLQPEIHALRGHPGQIQAAETMRALLAGSEIRESHIVGDAR VQDPYCIRCQPQVTGAAMDVLRMAARTLGIEANAATDNPLVLIEADLIVSGGNFHAEP VGFAADMIALAIAEIGAIAQRRVALIVDPVLSFNLPPFLTPNPGLNSGYMIAEVTTAA LMSENKHLANPCVTDSTPTSANQEDHVSMAAHGARRLGAMNENLARILGVELLCAAQG IDFRAPLATSDTLQRVVARVRQDVAALGEDRYLAPDLERAAVMIASGDIVNAAGIDMP ELIA" gene 208582..210249 /locus_tag="RTM1035_01015" CDS 208582..210249 /locus_tag="RTM1035_01015" /EC_number="4.2.1.49" /note="COG2987 Urocanate hydratase" /codon_start=1 /transl_table=11 /product="urocanate hydratase" /protein_id="jcventer:1101493006645_RTM1035_01015" /db_xref="CDD:41237" /translation="MTDPRKNTRDIYPATGTKLTAKSWLTEAPLRMLMNNLHPDVAEN PHELVVYGGIGRAARTWKDYDMIVASLRELEEDQTLLVQSGKPVGVFQTHKDAPRVLI ANSNLVPHWATWDHFNELDKKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHY NGSLKGKWILTGGLGGMGGAQPLAAVMAGACCLAVECNPDSIDFRLRTRYVDEKAETL DEALAMIQRWTAAGEAKSVGLLGNAADVFPELVKRGIRPDIVTDQTSAHDPINGYLPQ GWTMAQWKEKRESAPKEVEKAARASMKVQVKAMCDFHISGVPTVDYGNNIRQMAQEEG LDNAFDFPGFVPAYIRPLFCRGVGPFRWAALSGDPEDIYKTDAKVKEILSEDKHLHNW LDMARERIAFQGLPARICWVGLGVRHKLGLAFNEMVRNGELSAPIVIGRDHLDSGSVA SPNRETEAMKDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVICCD GTEDADRRIARVLWNDPATGVMRHADAGYEDALDCARENGLNLPGIL" gene complement(210294..210983) /locus_tag="RTM1035_01020" CDS complement(210294..210983) /locus_tag="RTM1035_01020" /note="COG2188 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="histidine utilization repressor" /protein_id="jcventer:1101493006645_RTM1035_01020" /db_xref="CDD:32371" /translation="MKVTYKEVKADILGKIIKGDWAPGNLVPNEVDLAETYGCARATV NRAMRELSDEGIIERRRKAGTRVRMSPIRQARFDIPLVRDEIEDKGASYRYSLSSRVV EVAPDWLRARLKLPEEGRVLHLVCMHYADCIPYEHEDRWINLTALPAAEFVDFSECGP SEWLVATIPFSEAEINLSAGSADQSLADYLACSVGDPVFNIERSTWWESDAVTYVRFS YRPGHRLTSRY" gene 211503..212531 /locus_tag="RTM1035_01025" CDS 211503..212531 /locus_tag="RTM1035_01025" /note="COG2855 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_01025" /db_xref="CDD:43525" /translation="MITTISPRQQALGFGHFITRNAFGVVIAVGITGLAALLHHLGLA TTIGLPILSILIAMVIGNAIPAPKASLPGLQIASRPLLRFGIILLGLQVTLGDMLALG LLPLAALVALVMGTMGFTVWVGRLLGVEKSLTVLIASGTSICGASAVLATASTISAKD EDVAYGVAMVTLFGSVAMTLLPMTSAYLNFGPMVHGFWTGGTIHEVAQAVAAAFQHDE DAGTVGTMVKLARVLMLVPVLLLVGALFNKGHQDASSKRAPFPMFVLGFMAMVGVNSV LDIPADLRAHFATLTACILATSLAAIGFQTRFPALLARGPRPLVLAAVSCCFVSGAGL LLALALFP" gene 212541..213428 /locus_tag="RTM1035_01030" CDS 212541..213428 /locus_tag="RTM1035_01030" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006645_RTM1035_01030" /db_xref="CDD:30928" /translation="MTLEQLRIFVAVATELNMTRAAEVLRLSQSAVSAAISALERRHD VQLFDRVGRGIALTPAGAVFLTEAKDILNRSQQAERVLEDLSTLRRGSIQLVASQTVG NYWLPRQLMSFHSSNPDIDLSVEITNSDRVMDWITSGKAELGFIESPVTMDGLEATHV GTDQMVLIGSREIGLQIDRAMLMSLPWVIREEGSGTRAMLLEFLSHYRLTLSDIRIAL VLPSNEAIASAVSDGLGVALMSRLAAGFLGQSSEIAIRPSPQPDRALTMVLSTQRHRS SAVQAFVRQIKAGSNPALI" gene 213536..214330 /locus_tag="RTM1035_01035" CDS 213536..214330 /locus_tag="RTM1035_01035" /note="COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC-type phosphate/phosphonate transport system periplasmic component-like protein" /protein_id="jcventer:1101493006645_RTM1035_01035" /db_xref="CDD:33034" /translation="MYNLNPALSSHWRSLFEHTAAIAGVPLDVIDYAAPAPLDLLWAR TDLACVFMCGWPFQRATRAFQVVAAPIPEYHATLHPLTGPQYCTNLVVSDAAPYNRLQ DTFGGRIAWTDRGSHSGFNAPRKLLLDHLNGQERLYSESIGPVVTPRASLNSILEGRA DVAPLDSYFHSLLARHEPDTARRIRVIAQTPASPIPLLVAAPEIAPEIVAKLGEAFAQ AADSPQLAPYLKDLCLSGFAIPSRKDYAVTDQWHAEAMAAGYHEPC" gene complement(214392..215396) /locus_tag="RTM1035_01040" CDS complement(214392..215396) /locus_tag="RTM1035_01040" /note="COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog" /codon_start=1 /transl_table=11 /product="ornithine cyclodeaminase/mu-crystallin" /protein_id="jcventer:1101493006645_RTM1035_01040" /db_xref="CDD:32552" /translation="MTEIWVDYLNALDIAELALTDDEILAAVESALIAQGNKQTVIEP RVHLVPESSDKGHFNVLRGYVKSLGVAGVKVVGDFVDNYKVGLPSELAILNLFSPETG VPLAIIDATAITDMRTGAVTALGAKHLARKDSKILGHVGSRGTSYWNVRLLNHLYDFD EIRIHSRRPESRNAFGERLEKDLGKKIIVTDNWQDCLEGADILIEATRLPEPTPMFKT EWIKKGALVIPYGTMSAVEFDLTDIMDKMLVDDWGQCGPGRPYGSLRAHVDAGKLSEE TLHAELGEVAAGLKPGRENDDETILFWHRGLSSTDVALGAALVAKAKANNIGQKIRFR " gene complement(215434..216381) /locus_tag="RTM1035_01045" CDS complement(215434..216381) /locus_tag="RTM1035_01045" /note="COG1125 ABC-type proline/glycine betaine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="ABC transporter related protein" /protein_id="jcventer:1101493006645_RTM1035_01045" /db_xref="CDD:31322" /translation="MMIELRNVTKTYNSGGRPAVDDVSLQIETGTTVALIGPSGCGKT TTMRMINCLQVPTSGQILVNGQDVTKVDPQVLRRSIGYVIQQVGLFPHMTISENVATV PRLLKHDPAKIRKRVNEMLELVGLDPDEMGPRLPNALSGGQRQRVGFARALAADPEVM LMDEPFGAIDPITRSKVQTEFKEILKKTNKTVVMVTHDLDEALKMGDRVAIMRDGKLL QYDAPIDILARPNSLFVADFLGTDRALKQLNLISVRDRMTPATSTDFPTIAPSASLHF ALSEILAQKVEGLIVREDGGPVLGFINRAAVLGPVALAS" gene complement(216378..217034) /locus_tag="RTM1035_01050" CDS complement(216378..217034) /locus_tag="RTM1035_01050" /note="COG1174 ABC-type proline/glycine betaine transport systems, permease component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="jcventer:1101493006645_RTM1035_01050" /db_xref="CDD:31367" /translation="MNLLDAFTWFLAHKSTFMIALNQHLWMSAVAMSIGAAIAIPLGF LVAHSRRASFVAINIVGAIRSIPSLAILSAALPLLGIGFLPSVVALIVLAVPPMLLNT VVGVAEVDLTVTDAATGMGMSRLQIALHIELPLALGPIISGVKIASIQVIGGAALASF VGGGGLGDFISTGIAIMDMPRLLVGAVPIALLAIAAEVGFSFLERRVSYRNVNLSGEP " gene complement(217034..217609) /locus_tag="RTM1035_01055" CDS complement(217034..217609) /locus_tag="RTM1035_01055" /note="COG1174 ABC-type proline/glycine betaine transport systems, permease component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="jcventer:1101493006645_RTM1035_01055" /db_xref="CDD:31367" /translation="MYLLIVPITIAFVISLAVGIYSAKKPRLYSFIMIVTGILFAIPS LALFALFIPIFGIGTIPAIIGLAAYSLMIMIRNIATGFQNLPPEVIDAAHGMGYGRWR RIYEIELPLALPFIIAGLRIASVTVIGIATIAAYINAGGLGTIIFEGLDQRYPEKILV GGALTSALALSVDFSLSTIERKLRKTTGGAM" gene complement(217660..219153) /locus_tag="RTM1035_01060" CDS complement(217660..219153) /locus_tag="RTM1035_01060" /note="COG2986 Histidine ammonia-lyase" /codon_start=1 /transl_table=11 /product="Histidine ammonia-lyase" /protein_id="jcventer:1101493006645_RTM1035_01060" /db_xref="CDD:28771" /translation="MSARTIFKIAHDFTPVSISPDTAKTIAASYSCLQEHAASGQAIY GVSTGLGAAVDTVMKVRTGDDQHLIPRARAVGVGRIATEVETRAMIATRLSRVCVGHS GMSYAVAAALAGMLNHRIVPRVPMLGSVGEADLAPMAHIAEVLTGRGTVIRADGSLTD GRTAFLEAGLELPKFGVKDGLALVSSNSAALGLAALAIADVQRVFAAQVAAVALSYEG FRASIAPLAPAATALRPAPYQGTIAESLLSLLEGGNLMQPKAQRRLQDPLSLRCVSSV FGAVQSTICHARDAVALELATSDDNPAVNTALDLVLPNGNFDPTHVALSFDTMALALA RLAAMTGERIMKMMSAEMSDLPRFMAPDVGGSNGFATVQKTVSALVATIGQQAMPMPF AAIPVADRVEDYASLLMPGVEKFSAIVENLRYLVGIELMVAAQAVDLRTGITLGQGTA AIQQAVRALVAPLTQDRAASPDIVALAEAIQQQRLGPILTELEEQLS" gene complement(219239..220117) /locus_tag="RTM1035_01065" CDS complement(219239..220117) /locus_tag="RTM1035_01065" /note="COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)" /codon_start=1 /transl_table=11 /product="Substrate-binding region of ABC-type glycine betaine transport system" /protein_id="jcventer:1101493006645_RTM1035_01065" /db_xref="CDD:31918" /translation="MKNLVTTLATSAALFIGQGAQADNFVVGTKNFTEQFILGEIYAA ALESIDIPVERKINLGGTLIAHAALTGGDIDMYPEYTGTALSAVVKGEMSSDAQVVYD TVKSYYDTELDLKWLEPAHINNGYAMLVRRETAEKYNLKTLSDLGVAAPELSIGGGPE FPDRADGLVGLRNVYGAEFREFRMFAKLGLRYDALAAGQIDVNNGFATDWQIAAEDYV VMEDDKGLFPPYFVAPVVRKDALEEFPGAEEMLNRVSDQLDNDIMRTLNKRVEVGREE ARDVAQDFLKSVGIID" gene 220448..220963 /locus_tag="RTM1035_01070" CDS 220448..220963 /locus_tag="RTM1035_01070" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family protein" /protein_id="jcventer:1101493006645_RTM1035_01070" /db_xref="CDD:41115" /translation="MDRLANLLNAAATAISDAQAMSMARHADLKPSTTGAILTLGQHS ALTLSELARIIGLSHSATVRLIDGLADKGLGRRGDGQDRREVAVSLTIEGLRLYADLR KAQSEILIPLTEGLTPMERATLEVALSRILAALTKSRQSADHICRFCDEGVCGQDDCP VEIQAVALSRA" gene 220960..221871 /locus_tag="RTM1035_01075" CDS 220960..221871 /locus_tag="RTM1035_01075" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_01075" /translation="MTDAISHPVPSRSVAVAAMLCSAACWGGATVMTKGALDAFDPFI LLVIQLVASVAALWTAVLLSSTSLLAFRPMVRAGSTGVLEPGLAYAVGVPGLALTTAG NASVIAALEPVFIFLGAWLLFRTRPTLRAIVAIVTAVIGVTLVSLTDPAGLGGGSVLG DGLVLFGTALAAAYVLASSKLAVTMPAVLLTALQQTAGLGLVVILSAFALFAGWQSLP ASVTLPALGLAILSGLIQYALAFWLYIVGLKGIAPGLAGMFLTTTPIFGVFGGIVFLG ERLVLSQLLGMTLVIVSLVALLRSRGG" gene 222622..223779 /locus_tag="RTM1035_01080" CDS 222622..223779 /locus_tag="RTM1035_01080" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_01080" /translation="MPDAGTGSMSQKMMQRLTARRAVCAMLVLPAMMLTTMGPERVAA QSFCGPTITACDLQQDQLCLERVLACGEYDTIIATLFAEDVAPTLDQKFALGAAYFGN HVRARATGLQCRAVVKGREWLRDYLGTVDTEFRQSASFGTLAQMRQIYQATQMLGELD QVGGCPESALTRARVQAIAAAEATQFARAIFLTPPDAVADVMGTLNIALRTFVSQASD LETGIALRRIEIEAAGRVLGSVRGLFDEVFGGVSGEGAALRVDSVVLDQLLADGRARL RRVENREDAFRVALGGFGPADYAEVRTETVRKAQGFLKESAFHINMIGVLMPTDPARP FLQLEGVLGADSPANAAREALSDIRLDWRSLGDANGNCALPNAAERVWYCR" gene 223776..225080 /locus_tag="RTM1035_01085" CDS 223776..225080 /locus_tag="RTM1035_01085" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_01085" /translation="MRQLLWITLVICLSGPAEAQNAVLDRAYGISKLDGFWRATLGSE APDLAAFEMFESVAAVPEPVREPAVDFGVPIIGEVVGETAPGTDGQGARLAFPVIPLT EEEAGPLMRRLAWAELYLTRVGYYAEDQEDPSEMVAALAARQKAAALEAYLITARLYF AAPDLTEKCTRLTRMAALEDSALETSVEITPAEGWAALQPLKAAAAERLGGSALSDLV CAFEPVRGRAETVRLIEVRVRERIALEARAKVEDSLTLLNAAAEEFQSLVTAMDVEIL TAEILELERVFGNAAANIRLVQNDQLKAEKTIAELEAVDLSALNQPGEMSEYQAAQGQ MVAMVALMDGVLTELAALAELLPDDGLAECRGLGSVYDGLDMNRDSFVLSSEIEGPYV ACLARAWALVEAGTSPSLETELMAELARHVGQISANLLEELQ" gene 225077..228910 /locus_tag="RTM1035_01090" CDS 225077..228910 /locus_tag="RTM1035_01090" /note="COG1196 Chromosome segregation ATPases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_01090" /db_xref="CDD:48311" /translation="MIRHFSLILVLALAAALPGRVAEAQQCLDVSAEEAQLHAAELVT LLQIATFRGDLKYMSDVAPELESYLDSCGSDPGGRLAQVCGFDCHLQLARYRLFLASD LPFLSTAGVLSRDSTLLSPQSAQQHAEDGIAVAERGLKLLARQQGSAEADNAFRTYTR QLVGLSSVKIRLRMTVGDTWYQTMSEARVKSLGFAVSEALEVIPGAALEDQPNLHKAH TQYEFALWTLIETKTDIPAEQTYDDLRADLTILEGELQARMESLRRGMIFLNIDPVAF TTIPFEELQQALDRTKRDLEAVEARMEAIVREWSAASEGQATRAIDERRVVRGQKINL LAHQIGKLETEAQILTGEVQQEISALDAELDTFSRRQQIRNLEIALSTKIAEFENRRQ QLQERQALDLIAITKEAEIERRAELRWLLSFEMTRMNLDLQVSSLESQIGEYDRQLAR NRTQLETLVRQRAILETRIVDAQSSIEGAKQRIDRIDVTQVDVHALRRNVIREDICGV ENQLALIGETLDTPFAPALPGEEPCDVVSPSFTRVEYQDTMCGTDSEPGLRAKLNDAR IFGRAFILKCVIGDPVELAELEPMAEASTLIDSGLSLEDELGAVSCNGFSQTEVDFAK GIYDAEKALLEKQRVGLEQQRDKVNEQLDFVTGWASDFQNTILGLQTGLAVVQGAYAA LAGVPETTVAAAGMASGVYTTIKVDKPAYAVMEAARVALNTALAFGKINIQTESQVRA FATQLANIREANERIDFEKAVKALALHRAHFQLAGKRAEGLQAIKELELQGSMAAVDC DNAQLGIDEQVARLKAQHTRMLATMELQAEENALLDFDRLQQEGLIERYFNEIAILQL ELEKLALNEAQLTEDNAQLGALVGAAQGRIERIEMTRATVEGLAEESQQVTTVIDELR QRQADQQLAISNSELAFVEARIRGEEGNTEQLVNALEGSIELVGQRAELKTQIEQVQA DMLVQVAAQREEMVNLASEIDDPDERRQLFIASQETLSELLRGIPDYISAKRTSLTTA NRLLHLMRQRYSLVLGITGRREDYPLTYVKDAAQLTALVSEIEGQRFFDETEIPIEVA RVVVPSQSGFIKKLALDEEVTFEISPFAGSDDAMREAGFFVIWDEKFRERKTMTLIDV LIGAQYTCTGAQWNTYTLSHLGSGTVFRPLAEGSPVTVPERIIGPSRGGQHTFYNMAA NEADLNRVLSYWQFNRFAARKFPRMPGPPNDQDAILPFLGAPVYGTYKLAVNPSDCPF EGAVFTLLFLFASTP" gene 228907..230247 /locus_tag="RTM1035_01095" CDS 228907..230247 /locus_tag="RTM1035_01095" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_01095" /translation="MSRFVSLTALAVLIAAPGAEARDTARNSIEGYVIERAVIRAPNC EGPAFDDVRIEAFEKGVCQFHQPARSAEQLDRVLKLLNRAQVQGLPVVHQQLAGFLTG LGHCATAERHLETFRGSGNADLTARDNFCAARMQSQAELNAIRWDFALFDYAEDLGVP NTLDTRLGEMASCYSGVLAPGFDAECGLITNITATELNVFVDEATDAVVQTYFTGVES PITAMFQRKRERAEGVLAMAGASIQGLKDGAAAVNAEYTAYHSAYETERDAKMTPIYE NYRESILRATAILDEFNRWKEGLFMTSDNVNLLPKIVERGVELTEELARVETDDYAAR AGKLVDDVRAVVQSEAEHRALIGQLCRVYFCELASRRRMIATQHVCRQPALTNNPICL NAQGQMKGGDLQVNFDGEQRIGVADFCRAAGIDDVFLTVGLSPATALTCMGQMP" gene 230256..232283 /locus_tag="RTM1035_01100" CDS 230256..232283 /locus_tag="RTM1035_01100" /note="COG3210 Large exoproteins involved in heme utilization or adhesion" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_01100" /translation="MLLSLICLAAGAARAEEPALARYVTDDNVDVYVALFGGQAVELA GCASEGAVRALIEMPNDRPISDRTQVDLTDSAALGAHPSIPCNPPPLAEAAWPGSVPI WADLTANGRYLLAAPNGAGFYAVDAKCEAIKTALSIRERAQGAGFQGFGQPDPLELRL TINCGPGAEAQGPVVPDADSGAEGWTLHSAELFMSEAGLPDTLLVASAPMGEGRGYLP IRRLDGVEIAPLFLEGGARLEAAKAALRMLFAVPEEDVVSPLGFEELEAVQSALFADI CTRNCDGYDHSHGFFALPGIDVALSFEGVEQTPAALDILGRDLSGLRFADGRALWLQG CAAVASALGIVPGEGDWKSMARAAHLGAGQAAAMRCNAARAATCIRVIGPGLPLVPEV FHASGSCAGKARLIVHLPEAVTATAPLMIDAERGFAEVEIAPMPGLERAILTVPAGAS GAASPCLLSSPRVMIHSRGDLRLMLRDVTLRRRLEEVPQEAIGLHSDGGTLVTDGVIM VADGDAGLPPERGISLCSGAYYARATRVQAGTIAVQGSNSRLAISGAPGAPTTLGSAR YAISASAGAEMILSNVTLTGRVGASLFNATLDATNLRLVSTDAQSGSSTALQFRGASE AQLMQSTAQGFACVGTFWTAGSAAIFTLPGNNLTADNTRPSCGAGTVQILE" gene 232302..235097 /locus_tag="RTM1035_01105" CDS 232302..235097 /locus_tag="RTM1035_01105" /note="COG4886 Leucine-rich repeat (LRR) protein" /codon_start=1 /transl_table=11 /product="Rab family protein" /protein_id="jcventer:1101493006645_RTM1035_01105" /db_xref="CDD:34495" /translation="MTLRFLAPLFLVLALALPAKAQEVSVVLVTDILGDRLHYPVVIS EGRGYRVRCESQSDEETMIAALGFLIPSSQIIDPTDQSIVDAAPAENPLLCPSSENYP ITVFAANTSQGLIHYLQFKADIGSEAAHDRIYIPGCAALVEALNLDLANATPGDPTLF FAGRIHEIACRPGAAPIETAPQTFAAWCTKGDLTPEEEATMRAILNGTPGGPGALGNT VACRQAQDFLTAVTSRNLDNSGAQSLAPLATLSHLNSLSLAGNQISDVSPLAGLTALQ FLDLSDNRIANVAALATLVNLTSLDLGGNTISDLRPISSLPLLQQLSLPGNVPDTIAP LQFLTQLTELDLARNELTSDDIGVLVGLSQLTLLDLSNNEIDDFSELANFGSEVEFKL AGNPASTGGPTDFITFCVQLRDEPTQTGATIRAMIEVTGQSTCSGAATVLNSSNALTI TGKTLSELGPLATLSHLTSLNLADNTITDVSALAALTQIITLDLSNNAIIDVRPLAAL ERLTTLRMAGNPVTFGDYLSACILRNEPETLSEAHRTEVGALLSISQTQTCRSSESRL KTMSTINLRDRGLTTLDYIRVAESATNVLLDNNPVGEVSNLRFLQRLQFVDASNTGLE DDDSLINLRALRNLDISSNPIAELWALRNMPELQSVNFRDTQIRDIRVLDELPSLQTA TMWNAPVVMNSMLTYCLVHRFQIGMLGDARRTVDAIMAVAEGAGQSSQNCRGVNEWAR SVTSLNLNAKQISNVAPIAGMPELTSLLLYDNNIRDVQPMRQLRKLKTLNLSKNQLGT IPIVFSQDLEHLYVTENQIANPSAVSRYSKLKSLNLRKNRLTVTSGISGLPQLSFLDL RDNKIAQLNQITPLLSKNPYIKGNPVCGLQNTVPILVICQREPQFILNSNLVDPNVVI RRDFLQPVPIIITPSNP" gene 235170..241574 /locus_tag="RTM1035_01110" CDS 235170..241574 /locus_tag="RTM1035_01110" /note="COG3209 Rhs family protein" /codon_start=1 /transl_table=11 /product="integrins alpha chain" /protein_id="jcventer:1101493006645_RTM1035_01110" /db_xref="CDD:33022" /translation="MLAVLPVGGFAADDKSASSVIQLPSAGGTVSQEEGAFQLNANTG SANFSLPLPELPQRGKFGPGLFLSYNQFAGDSGSGLGVGWSFTASSVIVNQDFGTAIP GRKPDGDFFHRLSFQGARLVYLGEIDGLPSYRPEVAEEQMVFVRHDMPFEVVVLDRTG EQEVMTIPAGFELRMADGSRMYFSGAEGVAEGNFATAEPTITRWPLVMSVNTNRDAVR YEYEKHGERSYLTGVAFAGGQSRYDFDLIDTRASLVSHIAGVRQQNPKLYGKVTASFA GDVYDQWCMAFIGRSLNDNTEFTVRTHPDCQAMAESDLAGEIDPNSVNVLDQLRAVYR FGNTGGSALGDDTLRYPDLRFDYSSWTAAELAERELVFPAPNLAFAGDISPQNLELAD LNMDALLDVVQTSDTEVTRVHLGEGALESAFETSIPLKLTRTTASGLTREITPRLVEN RFHFADITGDTYADILEVEDGLLHVFNGNAVGDFPYIGRAIPLDGISPSLFSDGNGRF VDVNLDGLSDIVATRLDANGRTEALIYLNLTRRQPDGGHAINFARVSKVLPMDSQDGG LLSRQSTRLTDVNGDRLPDLVTINVADQGFCIYENQGNIFSREAGALLWGDMRLNDPK CGAGRFTAIRGMSPSDNVQSMWYVDANGDGVRDFASMGSRTDEIQIWLGFGDGSFADE SLRLSLNARVQVGNAPNSFRSRVADLDADGQAEIIVFQQASGPEIAPVVVIDFNRTTE IQLVKANLLTVVSFESGRRHDIRYATSTDEMLRDRAAGRETATLHFPVVVAKQMVTSE GVANAARRDVQVEEYFYHKPFYDVINRRFIGFSEVERVIYGDEFVGGADTQKSSIAFE QYYAFADVTADLHLAGKLRIRQTYAVDADPVLLAAAAGSASLDPNAAGLHSLSTATRA QKLPTPGAMLSCESNTWQTAPTGIANVSWLRKTEERLTAAAGPQHVQEPSDTECVNPV KTRIFAEFDEFNYAGRETETVVELTGPEGQVMPGYARVTETDYSEARATLAPLGIVNA ASARRTVAGTRLLSRERFAYLPENGGRLGMRAIDVFSSLADVPPEIADWHSATHTLLK NMAYDRFGNVVEMSDNLSKIESVTFDETGTLPTAHTKFHGSDDSRNQVTTMAYDDGIA GRLSGQTTPLGMEINYDYDALGRKLRELSADGSEKRYAYRFGLNGAPSMILTSLRRYP SAADTPEGESEFVRSLAAFNARGNQLAEMEDVAEGGVRMFKYSEFNRNELLTFRWTPY MTETVPDVEAAFASGQVPEPERRHGNAYRYDGLGRMIEETHPSGKFSTQSYAPWGMTT ITTYEYQHGGSMSVEEHRLVNDVGVHAVMIGDASGTSLVTRFDRDGFGYLTAIRLAGE EVPRQFRFNSVGDMEFQQIPGLGTHYYFYDERGRQWSKARIAEDGTTDVIAFEYDLLN RKLLETVNGEDRIRYAYDVTETLQVAAAFETPIPLPLGKHTRIEVIDPNGRHDSIQRF GWDANGRMVQNEIEIAGEVFAESFHQTLDGRINRATGPGGLGYDFALGPDRNLRRVAI THPDFSGPETVIEDITYNPESRIDQIAYRAGAVTELTYNRETLFLEEIVTRTGDGTAL QDISMTFNGNGSITEIVDRLAAGPAPAHGHVDRSGTFHYDFRNQLVRYLRYGEDAAFE YTDAGAFSRNDEMAAGETLVPPSDADTDLIPVGASAAPYSFDGFGQLAASPKVTATVF DAYGRLIRAQTLEHDVFFGYDQTGRRTYKDVVPLDDAGAAELYLFPTETFHRGPKGGE SFVNIGSTRLVRMEHGTGRWFYYLKDHLDSSDYVMTSAGVPVEQMLYRAYGTEHQPQI LSSDWASHEEAVADEKPREKTHHRFTGKYLDDATGLYYYGARYYDPALGRFISPDPLY LSDPERCVGNTIACTLFAYANNNPMSFIDPTGLEGIVQGDEAYRRQVEESLQRVDPTA RVDMETGEISQSWLHGLWLDIKSFFTGETNFDTGRELVSRIVEDPQTTTISFQANAAG GARADGQPFTSSTPGDINLVYDPSYLPALPEYDASTGTLSYETPDPGVVLGHELIHAT HGMRGDVGSAIVNYTGLDGSPQSAWHEEIRTTGVGGVNSPDDITENDLREMLGINPRN HY" gene 241636..242292 /locus_tag="RTM1035_01115" CDS 241636..242292 /locus_tag="RTM1035_01115" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006645_RTM1035_01115" /translation="MSRTSTKGRNWAAAALIGAAALGPSTGEMAMATPLAEPLDIPAE FLSEIDGAPDWLRGAMAGLGAPEGWSMTRDAIVVSEVEALRALNRIRAFRQAVRGGTG AIWLSLPVANEIGEIRDCVTPWATQLIPDLDANDFGQSFALSMLRTDEPEACLIDVGT DDPWAGSDRTALRGYFDDAGDLMVEHISLNEDAVFVRALIEAGYLVTKGSVSGRLRVE " gene complement(242446..243102) /locus_tag="RTM1035_01120" CDS complement(242446..243102) /locus_tag="RTM1035_01120" /note="COG4126 Hydantoin racemase" /codon_start=1 /transl_table=11 /product="HyuE hydantoin racemase" /protein_id="jcventer:1101493006645_RTM1035_01120" /db_xref="CDD:33883" /translation="MKLAYINPNATVGMTTGVVTAARKALPETDIFGLTNTSGPVAIQ GKADGDAAVPGLLSLLPVARAQGAQAIVIACFDDTGLNEARARAGCPVLGIGQASYVM AQLLGLRFSVITSMAISVPVIEENIREQGFAGICASVRASGLPVLTIDEGAPETIDRI AAEIETARLEDAATCAVLGCAGMAPLQGALAARTSLRLIDGVSASALLAKAVVSGFGP " gene complement(243099..>243873) /locus_tag="RTM1035_01125" CDS complement(243099..>243873) /locus_tag="RTM1035_01125" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=2 /transl_table=11 /product="ABC spermidine/putrescine transporter, inner membrane subunit" /protein_id="jcventer:1101493006645_RTM1035_01125" /db_xref="CDD:31370" /translation="LYGPILTISILSFQGPQGGLTFPMNGASLHWFRDLFEQQAVGDI WGAFRRSLVLGLVVMVTTVVVSVMAGLAFRKRFVGSGLLFYATVTALVIPSILISLGV GLIFTQLGLKIHWATSGFGAQLTWTLPFGLLIMFAVFNRFDKSYEEAARDQGATAWQT LRYVVLPIIGPSLIGVALFGFTLSYDEFARTLLTAGSYNTLPLEIFGMTTNVTTPVIY ALGTLTTVFSFAIIAAFLMGAWIMGKRRARLGSDAGLGL" gene complement(244858..246129) /locus_tag="RTM1035_01140" CDS complement(244858..246129) /locus_tag="RTM1035_01140" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="ABC spermidine/putrescine transporter, periplasmic binding protein" /protein_id="jcventer:1101493006646_RTM1035_01140" /db_xref="CDD:31031" /translation="MAKPKVGYSRRALLKAGGAAFAASALPAPMLWAQDTKDIVLRQF GTGVSNLNDVANKVKEDLGFTLEMTALDSDSVTQRAATQPDSFDIADIEYWICKKVWP TGNLQAMDTARIANYDKIVGIFRSGKLTPTSTIAQGTAPHSVGFVDGPGSTSFASEET GWMTLIPTIYNADTLGIRPDLIGRPIESWTELLNPEFKGKASILDISSIGIMDMAMVC EAMGAVEYGDKGNMTRDEIDKTMAIFTEAKKNGQFRAFWKSFDESVNLMASGEVVIQS MWSPAITAVKSRGIPCVYQPLKEGYRSWGGGIGLSASLSGMELDAAYDYINWYLSGWV GGYLMRQGYYSAVPETSKNFMSENEWGYWFEGKPATDVITSPTGDTLAQAGEVRDGGS FNERMGAVACWNAVMDENQYMVRKWNEFIAA" gene complement(246179..247165) /locus_tag="RTM1035_01145" CDS complement(246179..247165) /locus_tag="RTM1035_01145" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="ABC spermidine/putrescine transporter, ATPase subunit" /protein_id="jcventer:1101493006646_RTM1035_01145" /db_xref="CDD:33633" /translation="MGALMRTGYDLELVHLTKRYGDTVAVRDLNHVFVKGSYVCLLGP SGCGKSSTLRMIAGHEDVSEGAILLDGHDVSPLPPAQRGTAMMFQNYALFPHLSVREN VAFSLRMKGVNKATRHARANELLELVDMLNLADRLPAQLSGGQQQRVALARALITDPK VLLLDEPLSALDPFLRVRMRSELKKLQRALGITFLHVTHGQDEALALADEIVVMNDAV IEQAGPAREVWARPRTEFVARFIGGHNVLARPGGKVTVRADAVSLGKDGLPATVIAVE YQGASVSVTAATESGEEMLALLPEAQFFQSPKSPGEAVRLSWDEGRLHRLEA" gene 247406..248092 /locus_tag="RTM1035_01150" CDS 247406..248092 /locus_tag="RTM1035_01150" /note="COG1802 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family protein" /protein_id="jcventer:1101493006646_RTM1035_01150" /db_xref="CDD:31987" /translation="MTKIEITTWTSDAVILDLERAIHEHRLPPGTKLGEDELGDAYGI SRTIVRAALLALSHRHLVELKRNRGAFVAQPSIREAREVFEARALLEPRTAHSAATRM TEMDLALLRTNICNEHAALDAGENGRALFLSGQFHIEIARIADQSTIETFISELISRS SLIIALYWRRRAALCETQAHHALLDAFANRDAALAEQLMKSHLLDLVASLDLRNVTQP PTSLREALQR" gene 248089..248922 /locus_tag="RTM1035_01155" CDS 248089..248922 /locus_tag="RTM1035_01155" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /protein_id="jcventer:1101493006646_RTM1035_01155" /db_xref="CDD:40669" /translation="MSDLSCRIATLPEVVQLLDWAAEEGWNPGIDDAAAFYAADPEGF FVAKVDGQPVAAISVVNHSDAHAFLGLYLCRPAFRHQGIGFALWQHAIAHAGTRPLGL DGVPAQEANYAKSGFALVDRTRRLTGTLPLQALTLPLSRPEDFPALARLDWAATGVCR QRFLRVWVDNIATRKTVLLREAAEITGFATARRCREGVKIGPIVAPDAMAALHLAGQA AAALAEPLTIIDVPDGSAAFGAVLRRNGFVEGFGTARMYRGTAPENGDALHAVATLEL G" gene complement(248919..249068) /locus_tag="RTM1035_01160" CDS complement(248919..249068) /locus_tag="RTM1035_01160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01160" /translation="MILASPKKILYSHIYTKNTLSVQMQALVGLAVDTAALVVSFKST GFGAP" gene 249067..249525 /locus_tag="RTM1035_01165" CDS 249067..249525 /locus_tag="RTM1035_01165" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family protein" /protein_id="jcventer:1101493006646_RTM1035_01165" /db_xref="CDD:40389" /translation="MARAIYGTWIDLVCAFFKRPRRLQVAAVCYRETHGRKEVLLITS RGTGRWVIPKGWPIDGKDAPGAALQEAWEEAGVRSGCVSKEAVGLYCYEKELSTGLPV SVETLVFTIEVDQMDEDYPEAAERRLTWVSPGAAASMVQEPELQDILRKM" gene 249717..251099 /locus_tag="RTM1035_01170" CDS 249717..251099 /locus_tag="RTM1035_01170" /note="COG0306 Phosphate/sulphate permeases" /codon_start=1 /transl_table=11 /product="phosphate transporter family protein" /protein_id="jcventer:1101493006646_RTM1035_01170" /db_xref="CDD:41434" /translation="MVAPGIALAFIVVTALAAAVFFGEFPINFVVIAATVFGAYMALN IGANDVANNMGPAVGANALTLGGAITIAAIFETLGALLAGGDVVSTISSGIIDPVTVA DTQVFIWAMMAALISAALWINLATWIGAPVSTTHSVVGGVMGAGIAAAGLAAVNWSTM SAIAASWVISPVLGGVIAALFLALIKSRIIYREDKIAAARRWVPILIGIMVGAFATYL AMKGLKRVVKIDLGTAVTIGLMMGVISWLVTIPLIKRQSQGLENRNKSLKVLFGAPLV ISAALLSFAHGANDVANAVGPLAAIVHAAEFGSVTEQVSIPLWVMIVGAFGISFGLFL FGPKLIRMVGSQITKLNPMRAYCVALSAAFTVIVASWLGLPVSSTHIAVGGVFGVGFF REWDAERRLRNNKVAKPQELRIAPEERRRRKLVRRSHFMTIIAAWVITVPAASLVSAL VFLALNSLPA" gene 251122..251223 /locus_tag="RTM1035_01175" CDS 251122..251223 /locus_tag="RTM1035_01175" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01175" /translation="MLFTNRGFRNVEKDRALFLAAMIKDALADEPGH" gene complement(251238..252062) /locus_tag="RTM1035_01180" CDS complement(251238..252062) /locus_tag="RTM1035_01180" /note="COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="iron ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01180" /db_xref="CDD:31317" /translation="MLEAQDLSIGYGKSPIGTGLNLQVREGEILCLLGPNGCGKTTLF RTLLGLLPALSGSVLLGGRPITAQTRAEIARAIAYVPQAHAPPFPFEALEVVLMGRTA RLGAFAQPGKTDRAVAEDAMRHLGIHDLAHRDYSQLSGGQRQLVLIARALAQEATLIV MDEPTASLDFGNQAQVLARIGALAQIKGTASHGVILSTHDPDQAFALNARVLLMHRGG VLAEGPAAEVLTEANLTTVYGLPITVESTLSGRKVCLPRLAARTSATMMPDAMTSP" gene complement(252062..253015) /locus_tag="RTM1035_01185" CDS complement(252062..253015) /locus_tag="RTM1035_01185" /note="COG0609 ABC-type Fe3+-siderophore transport system, permease component" /codon_start=1 /transl_table=11 /product="transport system permease protein" /protein_id="jcventer:1101493006646_RTM1035_01185" /db_xref="CDD:41102" /translation="MVLVLLAFGAVMIGPYGLTTGQVLSALLGQGDQQAQIVVWNIRL PRVGAALLVGAALAAAGASYQALFRNPLVSPDILGVSAGAGLGAVAGIFLSLPVVMIQ ASAFVGGMVAVGLVTLVGSLVRGTDRTLTLVLLGVVVGALAGAATSLLKVMADPYDQL PAITFWLLGSLASITTRDIVPALPVVLIGLVPLALLRWRINVLSLGDEEARALGIEAG RTRLVVIASATLITASVTALAGVVGWVGLVIPHIARMLVGPGFGRLLPASAMIGAGYL LVVDTLARTIAAVEVPLGVLTAVIGAPFFVWLLARGRRGWL" gene complement(253069..254097) /locus_tag="RTM1035_01190" CDS complement(253069..254097) /locus_tag="RTM1035_01190" /note="COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="periplasmic binding protein" /protein_id="jcventer:1101493006646_RTM1035_01190" /db_xref="CDD:29750" /translation="MRYLLVILAVLALPAHARSVTDSAGRVVEVPDTVTSVFASGPPA SVLVYVLKPEALTGWPRALRPEERAYIAAPYRDIPETGRLTGRGGEANLERVLQIQPD LIVDFGSVRDTYIDLADRVQEQTGIPYLLIDGRFDNTPEALRILGHALGVPERGEMLA LDVEATFARIDAMLANVPEEDRPRVYLARGPEGLETGMKGSINTEIIERAGGRNVADD GGATRGLVNASMEQLIVANPDTIVTWDPNFYASVFDDPLWQGIDAVQRGRVYLSPTAP FGWIDRPPSLNRMMGLLWMAGLLYPDLWQGDLREDTRAFYALYYNVDLSDEDLERLLE WAEGRPPM" gene complement(254099..254386) /locus_tag="RTM1035_01195" CDS complement(254099..254386) /locus_tag="RTM1035_01195" /note="COG3039 Transposase and inactivated derivatives, IS5 family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01195" /translation="MRFIGRIPTLRFARKNGPRYRRHNLEPEWHVAREGREAYANIET LYGLDQSAGADHRLITLNDAPRGARRPAEDLLSPQGLAMLADSGFATANGG" gene 255021..256283 /locus_tag="RTM1035_01200" CDS 255021..256283 /locus_tag="RTM1035_01200" /note="COG3487 Uncharacterized iron-regulated protein" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="jcventer:1101493006646_RTM1035_01200" /db_xref="CDD:33290" /translation="MIRNLLTTTAVIAALGGTALAQTPGDVLDTYADIAAANYTDSLT AAQALQTAVAALIQSPSAATLQAARAAWLAARVPYQQSEVFRFGNAIVDDWEGRVNAW PLDEGLIDYVDGAYGGATDQNQLAALNVIANPVFTLSGQEIDATEITPALLQETLHEA DGVEANVATGYHAIEFLLWGQDLNGHGDGAGDRPWTDYAQGADCTGGNCDRRAEYLAA ATKLLVGDLDWMTTQWADGGAARAALMADERAGLAAILTGMGSLSYGETAGERMRLGL MLNDPEEEHSCFADNTHNDHFYNGVGIRNVYLGSYTRTDGTSVSGPSLSGLVAEIAPT LDVEMRARLADAVLALGRIKTSAEAGFAYDEMLERGNAGGEALIMGGVEGLIAQTRSI ERVIAALDLGGIEIEGSDSLDDPSAVFQ" gene 256403..257428 /locus_tag="RTM1035_01205" CDS 256403..257428 /locus_tag="RTM1035_01205" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01205" /translation="MKTLSVTLAACAALGATAAQSQDANSPFSAEFSVELQTDFTVDS SAPGGEINNTFATIEGALSFAFTSRTSINSTLVLEQITAPTSDSFLEDHGLYAEELYF AHDFGAAQVVLGKFNPAFGLAWDAAPGIYGVDFAEDYQLTEKLGAGLVIPFAAGQGEH ALSLSFFNADRSILSESLGENRGRTNRSDGGVSNTSAPESVAISLTGAFGATGYNLGL QSQARGVGDAEDQTGIVGGLSHEFATGSFPVKLLAELAYFDHFDGTADSATFATFGAE ALVGPVTLSAVYAMRDVETLPKDHLATLSGEIEILEGLSGALAYRYGDEGGDETHTIG ALLAYEF" gene 257519..258994 /locus_tag="RTM1035_01210" CDS 257519..258994 /locus_tag="RTM1035_01210" /note="COG3488 Predicted thiol oxidoreductase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01210" /db_xref="CDD:33291" /translation="MTAAQSLEDIHLNVVPRTETERARVDAATALPTDFSKAWPFEQN GGGAQTVRSRDTADAFSQPAANLTFEQELEFRIGNGMFRRVWVSPPASTLASDGLGPL YNARSCQRCHLKDGRGHPPEGPGDSAVSMFLRISIPAPEASEIAAYIDGIHPTAPDPT YGTQLQDFSLPGHKPEYRLDVSYEEIELPLAGGEVAHLRAPTYRAADLGYGPLHANAM LSPRVAPQMIGMGLLEAIPSEDILALADPEDVDGDGISGRPQIVWSDVYDQPMLGRFG HKAGNPTLLEQTASAFAGDIGISNPIHPAGSGDCTDAQTDCRAAMHGGDAEQSGFEID QVGLDIVTFYSQTLAVPARRNLSDPEVLRGREVFYTTGCASCHRPNYVTHRLEGDNPA SFQLIWPYTDLLLHDMGPDLADNRPEGCANGQEWRTAPLWGIGMTKLVSGHTYFLHDG RARSLLEAVLWHGGEAQHARDTVVDMPPEERAALIKYLESL" gene 258991..259989 /locus_tag="RTM1035_01215" CDS 258991..259989 /locus_tag="RTM1035_01215" /note="COG3489 Predicted periplasmic lipoprotein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01215" /db_xref="CDD:33292" /translation="MRLITTPVLSLSLVLCLAAPSLADVKSALDAHILPAFARFAESA DALAETASADCRPEAMAEAYHTAFDAWIAVSDLRIGPSETGALSVAFWPDGRGSTPRA LAQLIAEEDPVAFDPKAYAEVSIAARGLFALDMLMFDPEFSDYAPQSYGCTLAATIAA DLALQAHALEAAWSGPFADTLQSAGADGNAAFLTPDEALRAIYTQILTSLEFTADTRL GLPMGTFDQPRPLRAEARRSGRSLRNVVLAAEAAHGLASALADWPLPETQAALARLHV AAARITDPAFQDVTDPQARLRAEVLQQAVRGLRAAIEEEIGAQLGIAPGFNAQDGD" gene 259994..261064 /locus_tag="RTM1035_01220" CDS 259994..261064 /locus_tag="RTM1035_01220" /note="COG3490 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01220" /db_xref="CDD:47317" /translation="MATRRGFLIGLAAAGAAPRIGWAAVGSPAYLAAAREADGTFTLY GLSTDGIAKFRVPLPARGHAGAAHPIRAEAVAFARRPGQFALVIDCATGAVLHSLTPP ERRQFNGHGVFAAGGDLLFTSEQARDTSEGIIGIWDAAAGYARIGEFPSGGIGPHDLR LMPDGQTLVVANGGIATDPSDRTKLNISTMRPNLGYLTLSGTLVDRVEPSPDLQQNSI RHLAVRGDGLVAFAMQWEGQPGMAPPLVALHRRGQAPMLAEAPLADEIAMQGYAGSIA FCGDGSEVAITSPRGGRVHRFGIDGVFLGAVGRADVCGLAPRAGGYLASDGLGGLVAV APSGLIALARHDCAWDNHIIPL" gene 261114..261329 /locus_tag="RTM1035_01225" CDS 261114..261329 /locus_tag="RTM1035_01225" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01225" /translation="MLHFGWLKGTDAGKHPAGRRPFDVGATIRFISQSPDLFVFGRCA RSIYAPCAYDIFWMLGLKPECGLTFAF" gene complement(261367..263220) /locus_tag="RTM1035_01230" CDS complement(261367..263220) /locus_tag="RTM1035_01230" /note="COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="transcriptional regulatory protein" /protein_id="jcventer:1101493006646_RTM1035_01230" /db_xref="CDD:33622" /translation="MYEIPTTPDSLLDALAEAALVIDLVADRIVAANPRARALLDLED STGAPFSPLVGASLPGFIVLVDEIAHRGEAWSRDITLASITGRPLRVELRGRLVANAP SLLALTLLDLAEMERHDRIAQAAELHRSGLLEWRRAQEFFSELERQNQLILNAAGEGI YGVNADGKTTFLNRAAQEMLGWTAEDLLGHDIHSVIHHHHLNGDIYHAHDCPIYQSFR FEEVNRIEDEVFWRKDGKPIRVEYVSTPIYDQNVLAGAVVIFRDITERKESERKLREA MAEVAALRDRLEQENAYLQEAITTERAHHNIIGASSAVRQTVQRIDLVARTDATVFIS GETGTGKSLVATAIHKASPRARRPLIHFKCGSVAPEEVEAELWGQVRGAPNGATRDKP GKLELAHSGTLFLDDVEELPFEIQGKLLAALQNSAVTRLGDTREKPLDIRVIASTTLS DKQARRSHRIREDLYLFLNVFPITCQPLRDRQEDIPLLAAHLLKIACRRLNRPEPVLT EGVVQQLQSYDWPGNVRELHNVMERAAIVSQDRKLVVELGGVGPLAETGRSFRTEAQM QDLVRVNLIAALRETRGRIAGPSGAAALLGVKPTTLYSRIGSLNIVEADWT" gene 263429..264805 /locus_tag="RTM1035_01235" CDS 263429..264805 /locus_tag="RTM1035_01235" /note="COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="putative nitrate transporter component, nrtA" /protein_id="jcventer:1101493006646_RTM1035_01235" /db_xref="CDD:31059" /translation="MTMKSLGDPFSEKNDLRHGASCGCDTCNGAQHDVTARAMSSEAM LERAVESAVVRSVFGHSDIGRRSFMGMMGGGTVAAALASVFPLDAAKAAILDNLGAPE KTDLNIGFVPITCATPIIMAQPLGFYERYGLNASVIKTAGWAVARDKSLSGEYDASHM LTPMPLAMTLGAGSTAVPYIMPAVENINGQAIVLSNEHLDKRDPKQWKGFTFGVPFEY SMHNFLLRYYVAEHGLDPDVDIQIRVVPPPEMVANLRAGNLDGYLSPDPFNQRAVWEG IGFIHLLTKEIWEGHPCCAFAAPLSFATELPNTYGALLKSIFDATQYASNPENRIEIS EAIAPTNYLNQPVEVIQQVLTGTFADGLGAVQQVPDRIDFDPFPWHSMGVWILTQMKR WGYIENDIDYKAVAEQVYLAADAKKVMNDLGYDAPDITYKSHTIMGKTFDPAEPEAYV KSFAIGKG" gene 264809..265642 /locus_tag="RTM1035_01240" CDS 264809..265642 /locus_tag="RTM1035_01240" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="possible nitrate transport system permease protein" /protein_id="jcventer:1101493006646_RTM1035_01240" /db_xref="CDD:30945" /translation="MSTMSLNQRALLLSVVMLFVGLFLWEMSIPAQKAVGELTEYERL TGGGAQKAGVPPPSQVMAKAWEELSNPFYDAGPNDKGIGIQIGYSIYRVLSGYLMAAV VAIPLGFLIGMSPVAYKALNPFIQVLRPISPLAWMPLALFVIQDSEASAIFVIFICSI WPMLINTAFGVAGVRQDWVNVARTHELGHFKTAFTVILPAAAPTIVTGMRISIGIAWL VIVAAEMLVGGTGIGYYVWNEWNNLDLTSVIFSILMIGIVGMMLDAAFATLQRAVAYA E" gene 265654..266556 /locus_tag="RTM1035_01245" CDS 265654..266556 /locus_tag="RTM1035_01245" /note="COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="nitrate transport ATP-binding subunits C and D" /protein_id="jcventer:1101493006646_RTM1035_01245" /db_xref="CDD:31313" /translation="MNKPFLSIENLTQCYPDGQGGTTTVFENATFGVEKGEFVCILGH SGCGKSTIMNILAGLAEPTSGVVKMDGFEVSGPSLDRGVVFQNYSLLPWLSTLKNVSF GVAARHPDWSKAKVLDHSREYLAMVGLEGDVIHRKPSQLSGGMRQRVSIARAFANHPK LLLLDEPFGALDALTRGTIQDELLKIWGGTGQTVFMITHDIDEAILLADRILLMTNGP FARVAESVEITIPRPRNRTEIVEHPNYYPIRNHLVQFLGKRSKELAGQVSDGAAQTPE TVRIDHAPPEDETGEALRLRAVNL" gene 266584..267066 /locus_tag="RTM1035_01250" CDS 266584..267066 /locus_tag="RTM1035_01250" /note="COG1513 Cyanate lyase" /codon_start=1 /transl_table=11 /product="cyanate lyase" /protein_id="jcventer:1101493006646_RTM1035_01250" /db_xref="CDD:31702" /translation="MEDTMKDTVTMPALMTKEDVTTLILIAKKKTGMKWEEIAEGIGM SPVWTHSACMGMNTMPKAKAEALVALLDLPEEAVSVLEEYPTKIWEQAVPTDPCIYRL YEIVGVYGPTMKALIQEEFGDGIMSAIDFDMKITRVANPKGDRVKVEMSGKFLGYNSW " gene complement(267140..267505) /locus_tag="RTM1035_01255" CDS complement(267140..267505) /locus_tag="RTM1035_01255" /note="COG3450 Predicted enzyme of the cupin superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01255" /db_xref="CDD:45792" /translation="MIDLKTYQSLATQPIGAFAPKPTSLTPGQEEASVQLWASADGHT KIGVWECTPGHFTADRTAMGEYCHIISGRASVTNADGQGTRDIGPGDLLVLPQGWTGE WVIHEHMRKLYILSTSPTI" gene complement(267555..268376) /locus_tag="RTM1035_01260" CDS complement(267555..268376) /locus_tag="RTM1035_01260" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, permease protein" /protein_id="jcventer:1101493006646_RTM1035_01260" /db_xref="CDD:31370" /translation="MRNWLNSPATDTQVTHGQRLWLYVFAVIVMILLVTPTLIVIPMS FSDSQYLEFPPEVWSTRWYDNFFGSSEWMQAARTSFQTAFLTMIVATPIGVLAAYGLH SSRFAFVRVAFVLMITPMMVPLVLVAIGAFYAYVKLNLLYTITGLVLAHTVLALPLVV IVTGSALKGYDMSQEQAARSLGAPRWKAFLTVTLPQIRFAVVTSALLAFLTSFDEVVV AMFISGGDNPTLTRNMFNALRDQIDPTIAAISTIMILVTTVMMVLVQVFGQDKKH" gene complement(268376..269266) /locus_tag="RTM1035_01265" CDS complement(268376..269266) /locus_tag="RTM1035_01265" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, permease protein" /protein_id="jcventer:1101493006646_RTM1035_01265" /db_xref="CDD:31369" /translation="MSMQTAPLNAAGLRRDERLERLTLFGLSSPAILLILVVLVIPVG WLFYVSFIGANGQFSLENYERMISRRSYLRIFITTFQVSLLTTGLCILIGYPFAYFMS QLPSRLANLCLITVLLPFWTSLLVRTYAWLVLLQKQGLINNWAISLGLWDEPLKIVHN MTGTLIGMVHIMLPFLILPVYGAMKAIDRDYLKAAANLGASPRVAFWTVFFPLTAPGL FAGALMVFILCLGFFVTPAVLGGGKVIMVSMQIVSNIELFVNWGAASALGVVLLILTV AILWVASRFLNLDRMTGGGH" gene complement(269263..270351) /locus_tag="RTM1035_01270" CDS complement(269263..270351) /locus_tag="RTM1035_01270" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01270" /db_xref="CDD:33633" /translation="MTNTATEALPISVQNVTKTYGAVHALNDVSLEVKSGEFLTLLGP SGSGKTTLLMVLAGFTRPDCGSLKFGDREVIRTPPHLREVGMTFQSYALFPHMTVAGN VGYPLRLRKRPKAEIAERVERALETVQLGGYGNRRVDQLSGGQKQRVAVARAIVFEPR ILLMDEPLSALDKKLRDQMQIELRHLHEKLGMTTVYVTHDQREALTMSDRIAVVNHGR IMQLSTPRDLYEHPANRFVADFIGDSTFLTVNRLGADVTFGGVPLIHAGPLPDTPELQ LMIRPERIVLSSGGPREGANNFAATATDVVYQGDSYLLHARLDTGEMVALRGAVRGSN ATSLPQLGDRVTLTLAPEDTVLIDGSQT" gene complement(270426..271523) /locus_tag="RTM1035_01275" CDS complement(270426..271523) /locus_tag="RTM1035_01275" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01275" /db_xref="CDD:31031" /translation="MIKIGTYCHFAAFQQEKNKMRKTFSLTVAATLLASGAVAQGTEI TIASWGGSYQDAQSKALFEPASAATGVTVKQETYGGMADVRLQVSTGQVTFDIVASGS GSAARAGAEGLLEPLDYNVIDVSNFYPNLYSEYCVGGDVFSTVYAWNTDTYGDNGPQS WADFFDAEKFPGSRAYRGSVAGALEPALMADGVPMDQVYEVLSSEEGIERALNKIREL RPNISVFWSSGAQHAQLMKDGEVDMTTGWNGRFDTAAADGAKVDYSFNQALLDYDCFA IPKGAPNKDAAMQFLAEISKPEYQDDLPKYITYGPTNKSAYDTGEISAEVAAGLPSSP ENAAMQLPISLEWYAKWETVAAEMYQEMLTE" gene complement(271562..272806) /locus_tag="RTM1035_01280" CDS complement(271562..272806) /locus_tag="RTM1035_01280" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01280" /db_xref="CDD:31009" /translation="MDPPRDADVLIVGSGYTGLSAAIATARGGRKTVVIDAEAAGFGC STRNGGQISTSVKPSLEKLTAKFGAQKARALRGEGERALKWIGEFIDQEGIACDFKRV GRFHAAHTPAHYEMLVRDAEQMHKGEGIESFAVPRAEQHREMGTDFYHGGVVFTKHCA LHPAKYHRGLLMAALNAGVEVVAHCPVGKIENTGSGFRVQTAKGEVRARDVIVATNGY TGALTPWMQRRVIPIGSYIIATEELPESLIDELFPTDRIASDTCKVLYYYRASPDRRR VLFGGRVSAAETDTSVSAPLLFESMTRIFPQLKDCAISHSWHGTVAYSFDELAHTGVH DGVHYAMGYCGSGVSMAGYLGMRTGQKVLGLAEGKTAFDDVPHPTRPLYTGKPWFLPA TVAWYRWMDKRQTRRAMVADPS" gene complement(273001..274479) /locus_tag="RTM1035_01285" CDS complement(273001..274479) /locus_tag="RTM1035_01285" /note="COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family protein" /protein_id="jcventer:1101493006646_RTM1035_01285" /db_xref="CDD:31361" /translation="MKQAAGALLSAIHLDRSSRKGMSVQLYMALRDIILSGGLRAGDR LPATRTLARETGVSRTTVIDAVDRLVAEGMLVSQVGSGTFVSDTLEHQPSVPVLTTAS DTTAQQPRVSYAINHAEKSYAQRTWLPHEARAFVTALPALDAFPLAHWSRLSARHLRG ARGAVMGYGQPKGYEPLRRAITTHLSVLKGIQCHHEQIFITSGAQHAFALIGRLLLNP GDRVWMENPGASGARNALLSEGAELVPVDVDQDGLIVADGLAKAPHFRMAFVTPSHQQ PLGHVMSLARRFELLQAADAAQAVIVEDDYDGEFYYGNAPQPALRSTDTSGRVIYVGT FSKSLFPSLRLGFVLVPERMTEAFDRMFRFWASGPPTATQATVADFMDEGHFATHIRL MRRLYKARYEALMEESRILPDCITLQETASGFHTPAYLAPGIDAQAVVAQAAERGVVL APLSKYCLSPIDRSGLVFGFGSAAPEDIRRGMETLRTLPVLR" gene complement(274561..275661) /locus_tag="RTM1035_01290" CDS complement(274561..275661) /locus_tag="RTM1035_01290" /note="COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily" /codon_start=1 /transl_table=11 /product="mandelate racemase/muconate lactonizing enzyme family protein" /protein_id="jcventer:1101493006646_RTM1035_01290" /db_xref="CDD:48191" /translation="MRIARLETFCNEFVGFVRVTTDSGAQGWGQVSTYNADITCTIFH RQIAPHALGTDALDFADTLDLIYERELKYPGSYLRRAMTGLDTALWDMRGKLEGKPVA TLLGGSPGPVRAYASSMRRDITPEDEAERFCRLRDDKGFTAFKWRVGAEAGRDHDEWP GRTEAVVPTVSRALGDGIEKLVDGNSCYSPARAIEVGKLLQDNGIGHFEEPCPYWEYD QTAAVRAALLLDVAGGEQDCEYSSWQLMLDRGAVDIVQPDVMYMGGMHRTLQVCQMAA RAGLPVTPHAANLSLVTMCTMHLLRAIPNAGKYLEFSIEGPEYYPWQEGLFLGDPYRI EGGQAIVTDAPGWGVEISPTWLDSATYQVSER" gene complement(275771..276556) /locus_tag="RTM1035_01295" CDS complement(275771..276556) /locus_tag="RTM1035_01295" /note="COG2771 DNA-binding HTH domain-containing proteins" /codon_start=1 /transl_table=11 /product="DMSO reductase regulatory protein DorX" /protein_id="jcventer:1101493006646_RTM1035_01295" /db_xref="CDD:32632" /translation="MSDWFETSARAVSALGTPGFASALTTALRSIVPYEFTVIFAYYR DHKPLDLYDDFPAAKRKVMVDDYQEGPYLLDPFYLNAAAPTLPRLARLRDLAPDRFYQ AEYFRNYYIQTGLAEEIGFILNIGDEVGVVISAMREHKVFSAREFRDLEAAFPFVAAI AQKQWGGLITQFSARPETDGPRLPQLIEDAFQSLGRNLLTPREAEVVEYVLKGHSADA TGRALGISPGTVRIHRRNIYAKLRVSSQGELFSSFIAALSELA" gene 276673..277857 /locus_tag="RTM1035_01300" CDS 276673..277857 /locus_tag="RTM1035_01300" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="ABC permidine/putrescine transporter, ATPase subunit" /protein_id="jcventer:1101493006646_RTM1035_01300" /db_xref="CDD:33633" /translation="MLDANAEAGIRMGASREQGTHSTQGHPSDEDCVAEFVGATKRFG AVLAADRINLRIRRGEFLSFLGPSGCGKTTALRMLAGFESPSDGTVRIDGQDVSRVPA YARPVNMVFQHYALFPHMTVAQNIGYGLRQVRPKLAKSEIAARVDAALAKVRLDAFGA RRTWELSGGQQQRVALARAIINEPKLLLLDEPMAALDAKLRGEMQRELLDLQRSLGIT FVLVTHDQEEALSMSDRICIMGAGRIAQVGTPQDLYDRPRNRYVADFVGKANILKGEV LSREAGLARIALAGGAQVLVPNTAGDTRRHVEIAVRPEALRLAVPGEAPGEDAMLRAR ITHRTFLGDHTEYLMQADDIGPLQVNVPRQAERALGGQGVGDPVHILWTAGTGLVLAA DE" gene 277854..279053 /locus_tag="RTM1035_01305" CDS 277854..279053 /locus_tag="RTM1035_01305" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="ABC permidine/putrescine transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01305" /db_xref="CDD:31031" /translation="MTDNNCTTFNKGNETMTQDNTPISRKKFIEELRRYEKGSISRRQ FLGTTGLGTAMAVLGGALPGLLPGRAMAQDLGDRVVLATWPNYHDAANFDLFATETGV FSQVNVFGSNEEMLAKIQAGGSGWDVFVPTNYAISTYVEAGLIEPLDLSKLPNYDPAA FDARFADAGTIDGKVYAVPKNWGTTGIASNTAKTGGVVDSWKTFFDGAKDQFDGRVMV HDYQLTTIGNALAYFGYSFNSVDPAELAEAEKLLIEVKPHLFAISSDYQPAMRNGDAW LTMCWTGDGKQLNTDLPEIAFALGKEGGEIWSDYYAIPVGAPHREAAYALIDYLLAPE VNAREALAHGYPVADARTNALLPEELLNDPILYPAAEALNALEFGAAVTLTDPNRAEL MARFKSA" gene 279071..279928 /locus_tag="RTM1035_01310" CDS 279071..279928 /locus_tag="RTM1035_01310" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="ABC permidine/putrescine transporter, inner membrane subunit" /protein_id="jcventer:1101493006646_RTM1035_01310" /db_xref="CDD:31369" /translation="MAMTRTRARALLLMPAGIWYGVLLLFPLAVVLVFSFGERNPIGG YAPGFTLEQYANLPARFAAFRNTLTLAPLGTLAALFIAYPLAYYLALKVSARWKTTLL ILVIVPFWTSILIRSYAWIYLLGGNGIPALLEAVGLGDIRLINTPFAVLVGIVYGYLP LMVFPIYVALEKLDRSLLEAAADLGTPPWRSFLQITLPLSMPGVLTGSMLVFILLTGE FLIPAILGGGKVFFVGNALVDLFLQSRNWAFGSAVAVALIVIMLIVVALYSRAVRRFG AGRDDIGLM" gene 279936..280742 /locus_tag="RTM1035_01315" CDS 279936..280742 /locus_tag="RTM1035_01315" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=1 /transl_table=11 /product="ABC permidine/putrescine transporter, inner membrane subunit" /protein_id="jcventer:1101493006646_RTM1035_01315" /db_xref="CDD:31370" /translation="MRAYAIAVFAFLYLPIGIIALFSFSAGLSASSMQGFSTEWYGRA LSNPFVMEALWTSIKVAFLSAVLATVMGTMAALALTGMRGRLRVFFDTLVQVAVMIPG IVIGIATLIALVTVFDLINPWLEAMSGRRLSLGMGSLIGLHGMFTMSLVILLVRGRLE SFDRAQIEASGDLGAGPVATFVQVTLPQIAPAILAGFLLAFTFSFDDFIMAFFVAGSE TTLPIYIFSSIRRGVTPEINAIGTMVMVASLTLLIIAQVLLRPGAPRAGR" gene 280747..281517 /locus_tag="RTM1035_01320" CDS 280747..281517 /locus_tag="RTM1035_01320" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="Putative short-chain dehydrogenase/reductase" /protein_id="jcventer:1101493006646_RTM1035_01320" /db_xref="CDD:40206" /translation="MQEARMLKDRIALVTAAGSGIGRAGAVAMAREGAVVIVTDLDGG LAQETLAQIEAAGGRGAAFALDVTEDAACAAMVAQVVADWGRIDVLHSHAGIQIPGRA EDVTPAQMDAAWALNVRAHFVLSRAVIAPMRAQGGGSVIVTASNSGCQYDRGMVSYAT TKHAAVAMVKQMAVDYAAENIRFNALCPGFVDTPFNAGFETQMGGRKALESYVAGSIP MGRWASVEEIAHGIVYLASDRSSFVTGLALVIDGGEML" gene 281605..281907 /locus_tag="RTM1035_01325" CDS 281605..281907 /locus_tag="RTM1035_01325" /note="COG4991 Uncharacterized protein with a bacterial SH3 domain homologue" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01325" /db_xref="CDD:34596" /translation="MRRALIIVLVSLLSGSLLGAAPATAASLGRFEVHGVEGDDMLKM RAGPGIGYDVIVGLPNGTVLRVHSCQQTGGTRWCEVSLERARGLRGHVSWAYLRKL" gene 281904..282485 /locus_tag="RTM1035_01330" CDS 281904..282485 /locus_tag="RTM1035_01330" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01330" /translation="MRSALPIVLALLLCLGFAVSGARAADVAPPPAGLLWNKTGLPAV FPLQVKTLPGRDHVVTLIDAETGEEALAAYIRGGAFFRVLVPPGVYRLRFASGKHWQG EALFFGEGPDTEVFELRRVLRFETRGLGTKAGHIVDLRGRGTEAQITEQRICQSFRPD FPRPIIRPREDRRAVGPDYEVPQRRDVRSRYCG" gene complement(282711..283796) /locus_tag="RTM1035_01335" CDS complement(282711..283796) /locus_tag="RTM1035_01335" /note="COG3448 CBS-domain-containing membrane protein" /codon_start=1 /transl_table=11 /product="CBS-domain-containing membrane protein" /protein_id="jcventer:1101493006646_RTM1035_01335" /db_xref="CDD:33251" /translation="MRAGVGALISLGLTGLFLLSPQIDLDLGLFLVAPFGASAVLLFA VPNSPLAQPWSAIVGNTVGALVGVAVCLVVGDIALRIALAVGLAITATILCRALHPPA GAVAMTAAMSPEAIEHLGFWFALAPIAIGTTALVVLATGYARLTGRHYPFRQFDDPSN HRTEDRNPTERLGLSEGELTSILERFSQSFNLGVEDLARLIGAAELQAAAHSAGPLTA QDIMSRNLVTANPDTTLGEIADIFRKHRFTSLPVVGPDTKFLGVIFQMHLISQAREDA LRLHRGFLPSFKRLLDRDRAGPMTASDIMSVAVPRVTTNTPIGALLPIMADGDTDAVP VIEYGKIVGIVTRTDLIAALARRAARS" gene 284004..284957 /locus_tag="RTM1035_01340" CDS 284004..284957 /locus_tag="RTM1035_01340" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="possible transporter, RarD family, DMT superfamily protein" /protein_id="jcventer:1101493006646_RTM1035_01340" /db_xref="CDD:32782" /translation="MAMTNTSSASPSTDRILAGVALMLGFCVTAPLLDVAAKLASTSV PVGQITAARFIVQCALMTPFVLIMGLSLRVPRAHWLALLFRAVLLFVSTFCFIAAIRV MPLADALAIVFVAPFIVLLVGKFYLGEDVGPRRVGAAMVGFVGVLLVIQPSFAAFGAV ALFPLGTAVGFAFYILVTRGLSRRMHPVTLQFHTGLIASLLCLPVVILAEGTGIEMLD PVWPEGIAWLWLLGVGFFATLSHMMMTYALSLAPSATLAPLQYLELPVATLLGYLVFR DFPNALTLTGIAIIIGSGLYMIHRERVTARQLMTERAAPPI" gene 285286..285357 /locus_tag="RTM1035_01345" CDS 285286..285357 /locus_tag="RTM1035_01345" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01345" /translation="MFRLKSERTSILKLAVFLINLHL" gene 285661..286854 /locus_tag="RTM1035_01350" CDS 285661..286854 /locus_tag="RTM1035_01350" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter, substrate binding protein" /protein_id="jcventer:1101493006646_RTM1035_01350" /db_xref="CDD:31027" /translation="MGSALSAPALLSTLSRAAAQGSDIPVGLLFSLTGAVAVVESTLH DAALMAIEEINAAGGVHGMQLRPIIEDPASDPATYADRARRLMIRDKCVSVFGSYTSA SRQAVLPVTEQRNNLYWYPTLYEGRECSRNVMYGGAVPNQQQDDLIPWAIENFGPRFY MIGNNYVYPKEENNYCKTLLAKHGGEVVHEEYVPLGHSDFSSVINRIRAEEPDVIFAT VVGDSDVAFARQYHAAELDPAKMPVISLTRSEVEVKAIGGEAAAGHFSSAPYFMGTQT PENERFVEAYKSRYGGDQVTHFVSEAAYFQVYQFKAALEKLDPSNITPEAIRDAAVGL ALTAPQGEVLIDENLHTHLWPKIGQWQANGQAEVVVQSQSRVAPLPYAAYEGQRCTGQ GLVEG" gene 286940..287809 /locus_tag="RTM1035_01355" CDS 286940..287809 /locus_tag="RTM1035_01355" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="Branched-chain amino acid ABC-type transport system, permease component" /protein_id="jcventer:1101493006646_RTM1035_01355" /db_xref="CDD:30905" /translation="MDVILNQLFAGLSMASILLMIALGLAIIYGAMGVINLAHGEFVM LGAYAAWALQSYAGFSIIVALPFVFIAVAAVGWIIEKVIVQRLYHRPLDTILATWGIG IILQQLVRLSVGAESRFVKGPEILSGNTQIGGLIMSNYRLFVIVFSLSVLAASWALMT KTEFGMKLRAVIQNRKISECYGIEAKNIYSFTFAYGAGLAGIAGALITPLFSTIPTMG TGLVVDAFLVVIVGGLGSLLGAATASVLIGEATALFSMLFNDTLGRIAVLAGIIVLIR FRPRGLFPSNTRR" gene 287820..288932 /locus_tag="RTM1035_01360" CDS 287820..288932 /locus_tag="RTM1035_01360" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, membrane spanning protein" /protein_id="jcventer:1101493006646_RTM1035_01360" /db_xref="CDD:33917" /translation="MTTRLYYDLAALVLFALVIVLGVPALMGFDGFELNTFARYLALA IVSLALALSWGSAGLLNLGQAATFGMGSYAMAMHLKLKASGEALPDFMGWNNVPELPL LWAPFHSLGFTLLAGLLVPAFVGGLIAIFMFRARIAGVFVAIITLAFLVAFQLVVIEQ QGITGGQNGLTGLAPLSLMGWTVDTYGVGFYYLVAGCLMAAVTFGLYLTHSKFGLILR AIREDADRTRFFGYNVANYQTVIFCISAALAGWSGMLYTLVLEFASPTYMSVSFSLAI VIWCAVGGRDSVIAAAIGAIIVNLLEGRLSDVFVEGWNLMLGVIFVLVVMFMPRGLHG VISDLWQGLCQGMRKDRTPSSTPNRGAQPVKSGQER" gene 288965..289663 /locus_tag="RTM1035_01365" CDS 288965..289663 /locus_tag="RTM1035_01365" /note="COG4674 Uncharacterized ABC-type transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, nucleotide binding/ATPase protein" /protein_id="jcventer:1101493006646_RTM1035_01365" /db_xref="CDD:34291" /translation="MDFGGLRAVDGLSFDVAQGEILCLLGPNGAGKSTTLDLICGKTQ PTGGSIRFEGTEISQMLEFRRARLGIGRKFQVPSVYKELTVAENLSVARSRRPGIWHA LTRFALSDGHAAAPILERVGLEAKANDLAGNLSHGETQWLEIAMLIAQDSRLILMDEP TAGMTIQETERTAEIFRVLSDSHTLIVVEHDMSFVRTVADRIVVMNRGAMLAQGTIQE IETNEDVKTAYLGH" gene 289666..290367 /locus_tag="RTM1035_01370" CDS 289666..290367 /locus_tag="RTM1035_01370" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, nucleotide binding/ATPase protein" /protein_id="jcventer:1101493006646_RTM1035_01370" /db_xref="CDD:30759" /translation="METMQAKDLYSFYGKSPVIQGVSFDLEPGEFLAILGRNGVGKTT LLKSIMGLTDRCDGGLIFGEQDLLSRSTSQRAKLGIAYIPQGREIIPNFTVRENIVMG TFARPDGKREIPDYLFEMFPILDEFIGRKGGDLSGGQQQQLAIARALAMDPKILILDE PTEGIQPNIVKQIEDAIIRLNRERGLGIILVEQNVPFARRASDRFMVLDKGRVVLSGL SKDLTDSVVEKHLTF" gene 290413..291456 /locus_tag="RTM1035_01375" CDS 290413..291456 /locus_tag="RTM1035_01375" /note="COG0388 Predicted amidohydrolase" /codon_start=1 /transl_table=11 /product="aliphatic amidase" /protein_id="jcventer:1101493006646_RTM1035_01375" /db_xref="CDD:30737" /translation="MRHGDISSSDTTVGVAVVNYKMPRLHTKAEVLENAHKIADMIVG MKRGLPGMDLVIFPEYSTQGIMYDPDEMMETAATIPGEETEIFAAACRKANTWGVFSI TGERHEDHPKKTPYNTLILMNNKGEIVQKYRKVLPWNPIEGWYPGDKTYVCDGPKGLK VSLIICDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKDQQVIMAKAMAWANNTYVAVA NAAGFDGVYCYFGHSAIIGFDGRTLGECGEEEMGIQYAQLSIPEIRDARANDQSQNHL FKLLHRGYTGIHASGDGDKGVAECPFEFYRNWVNDAEKTREQVESFTRTTVGVACCPV GGLPTGAKEKEAN" gene 291531..292658 /locus_tag="RTM1035_01380" CDS 291531..292658 /locus_tag="RTM1035_01380" /note="COG0542 ATPases with chaperone activity, ATP-binding subunit" /codon_start=1 /transl_table=11 /product="probable chaperone" /protein_id="jcventer:1101493006646_RTM1035_01380" /db_xref="CDD:30888" /translation="MPFLTDRLHDTARQQKLASALADENARMTGASSTKGTTPNAGLQ TRFTFDLDQVEAELRAAIIGQDESLEQLLEILKVVRADIGDPRKPLATILFCGPTGVG KTETVRTLARALYGDADAFCRIDMNTLSQEHYAAALTGAPPGYVGSKEGTTILDQEKI EGTRNLPGLVLFDELEKASNEVVLALMNVFDNGLLTVASGERTYSFRNALVFMSSNLG ARELMALDENSGNLWQRIRNSGKSRRERAHDIVMNSLLDRFPPELVNRIDHVDTFNWI SRDKMPALVDVEMARLNRRLRKHDLSLSISTTLRDFLSVEGYDKRFGARGLRRAIRRK LEFPLAGFLLDGPAPDAPASGQAMTLVFADHKDGQVQFQYS" gene 292675..293844 /locus_tag="RTM1035_01385" CDS 292675..293844 /locus_tag="RTM1035_01385" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="two component sensor kinase" /protein_id="jcventer:1101493006646_RTM1035_01385" /db_xref="CDD:31027" /translation="MTQKESWKIGLLFSTTGVTSIIEQSQLNGALLALDQINARGGVR GRPLEAVSYDPGSIVTQYGELAERLIVDDKVSVIFGCYMSSSRKEVLPVVERRNALFF YPTLYEGFEYSPNVIYGGACPNQNSVPLANYLMSAYGKRIFFVGSNYIYPYESNRVMR NVLRQGGGEVVGERYFDLETRAEGFRAVLDEIRDAQPDAIFSTIVGQSCIEFYRAYHA VGGDGRVCPIASLTTNEGEISAIGAEAAVGHITAAPYFRSISSLANRRFLKAYEQKFG STIDVTSCCEAAYSQVHLFAAALEETGEMDTDCLREALLGEAFDAPQGQIKVDPDNNH TYLQSRIAVVNSEGEFEIDLKVRRAIKPDPYLVYPAIHDWSFRTHKVTTSGGRHA" gene complement(293858..293953) /locus_tag="RTM1035_01390" CDS complement(293858..293953) /locus_tag="RTM1035_01390" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01390" /translation="MFETTADPVYLLQKLICATVTRMHQENVLIP" gene 293954..294436 /locus_tag="RTM1035_01395" CDS 293954..294436 /locus_tag="RTM1035_01395" /note="COG3707 Response regulator with putative antiterminator output domain" /codon_start=1 /transl_table=11 /product="two component response regulator" /protein_id="jcventer:1101493006646_RTM1035_01395" /db_xref="CDD:33502" /translation="MWPLPRTLPDKFDMVFVDVTDQSPQELKAFLDRRERPITTIAIV GYENPSTLDVILEIGAHSVLMKPVRAAGVLSSMLMARRFQSEQVRYEKDLSKLREKLE NVQKVNDAKFILMRHRGITEREAYDLIRKQAMAKRTTTTEIAQSIINAESILSNMGDT " gene complement(295145..297022) /gene="cpdB" /locus_tag="RTM1035_01400" CDS complement(295145..297022) /gene="cpdB" /locus_tag="RTM1035_01400" /EC_number="3.1.4.16" /note="COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases" /codon_start=1 /transl_table=11 /product="bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein" /protein_id="jcventer:1101493006646_RTM1035_01400" /db_xref="CDD:31080" /translation="MQTTDVHGNLLPFDYYTNQPDRPWGLARLATQIKRARSEVGAEN CLVLDNGDFLQGTPLTDLTAQPDNGWTGPHPILAAMNDIGYDAGTLGNHEFNFGLDWL MDTLAQARFPLTCCNVLTRRGGTPVDDTTLLPPYLLLNKQMQDRDGGSHSLRIGLLGL VPPQILTWDHARLSGRIDVRDMVESARAWVPTLRALGADLVLLLAHTGIDPGPDRPFM ENAARALARLPGIDALLAGHSHKSFPSTDHNGIAGANASNGTLHDTPCLMAGFRGNHL GQLDLTLTHDGNAWQVTGHDSRLLAVSSAQPCPAICIAADAAHRHTLALTAREIGQTA APLHSYLTLLRDDPILHLVNDAQRRALTLALANSPHAGLPLLSASAPFKTGGRGGPAH FTDIPKGPLLLRHIADLYSFPNTLCGLLVTGADLRDWLERAAICFNQINPGLPDQPLL DPSVPGYDFDVIDGLSYTIDLSQPARYDLSGALIHPKAARIQDLCFARKPVRPDTPFI IATNSYRAHGGGPFAPLAERGLIYSGTRTVRDLLADHVAAVGQVVPAPRPTWRFAPQP GTRVTIETGPGLRAHPADIAALDAVDLGLTDAGFLRLGMPLPFAQPTLAHPAAAAYIT R" gene 297323..298294 /locus_tag="RTM1035_01405" CDS 297323..298294 /locus_tag="RTM1035_01405" /note="COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family protein" /protein_id="jcventer:1101493006646_RTM1035_01405" /db_xref="CDD:32645" /translation="MRTSEQVTFGGSGLDRADELRSDEGLLQAAMTEGRARSIVLWRG KPLLRAETLDELVILAPDHPVLTRYKVPPILLGRDDSGDLILAHDISAWVPPGLEPDQ LDSFLDASEQVHPDLPEESAFAELRRVMTRLSPRDAELAATAKAVFGWHLTHRFCARC GKESRMIRAGWQRACDHCGGQHFPRTDPVVIMLITRGNSVLMGRSPGWPEGMYSLLAG FIEPGETIEAAVRREVWEEAGIKVGRVSYLASQPWPFPASLMFGCRGEALSEDITIDP QEIEDALWMSREEILSAFAGEHPFLMPARKGAIAQFLLENWLADCLD" gene 298349..298816 /locus_tag="RTM1035_01410" CDS 298349..298816 /locus_tag="RTM1035_01410" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01410" /translation="MQFTGKEDIEAPIERVFEEITDFQGFERSALRRGADVRRTDKLK VPGVGMSWHAVFKLRGKQRKVDVTVAEYDPPNGIKLGVISPAIEGQMVVELVALSRGR TRMTVTLVLQPRTLAARLMMQSLRLARNNLTKRFKVRLAEYAAEVEDRYTRSL" gene complement(298832..299674) /locus_tag="RTM1035_01415" CDS complement(298832..299674) /locus_tag="RTM1035_01415" /EC_number="4.2.5.1" /note="COG0077 Prephenate dehydratase" /codon_start=1 /transl_table=11 /product="prephenate dehydratase" /protein_id="jcventer:1101493006646_RTM1035_01415" /db_xref="CDD:30426" /translation="MTDRIAFQGELGAYSHQACRETYPEMEALPCRTFEDAISAVREG QAELAMLPVENSTFGRVADIHHLLPESGLHIVGEAFVRVHINLLALPGIRLDEIESAM SHTMLLGQCRAFLERHGIHRVTGADTAGSARHVAEAGQPEMAALASELAGEIYGLDVI ARHIEDQGNNTTRFLVMAREPDFAARGENGMMTTFVFQVRNIPAALYKAMGGFATNGV NMTKLESYMVGGSFTATQFYADIEGHPDDPAVARALDELDYFTSNVTILGVYPADPRR HDTD" gene 299794..300972 /locus_tag="RTM1035_01420" CDS 299794..300972 /locus_tag="RTM1035_01420" /note="COG3474 Cytochrome c2" /codon_start=1 /transl_table=11 /product="Cytochrome cy" /protein_id="jcventer:1101493006646_RTM1035_01420" /db_xref="CDD:33277" /translation="MFDTMTMTKTAGALCGALLVFLLGNWAAESIYSVGGGHGEDHAQ GYVIDTGADEAEEVVDEGPSIAELMASADPANGEGLFRNCAACHAVVDGENKVGPHLY GVVGREVGGVADYGSYSGALTAVAQVWTPVELDAFLENPKGYAPGTSMGYAGMRKAED RADLIAYLDQTDGTTFEMPVEESAAEPAAEDAAAEPAAEEAAAEPAAEESAAEPAAEE AAAEPAAEEAAEPAAEEAAAEPAAEEAAAEPAAEEAAVEPAAEEAAAEPAAEEAAAEP AADAGASDFAALVAAADIAEGEKLYRRCGACHKLEDGKNGAGPHLFGIVGRDIANVEG FAYSDALKGLEGTWTPEKLSDWIENPRAFAPGNRMGFPGLKDEADRANLIGYLQSAAN " gene 301110..303065 /locus_tag="RTM1035_01425" CDS 301110..303065 /locus_tag="RTM1035_01425" /note="COG4166 ABC-type oligopeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="extracellular solute-binding protein, family 5" /protein_id="jcventer:1101493006646_RTM1035_01425" /db_xref="CDD:33908" /translation="MRQEEDGMTVRNTLTKTRTFASLVPWRLRVTMIGFSIATLMAQA VLAQDEVISSHGYSFYGDLKYPADYAHFDYVNPEAPKGGEISLFAPGTFDSMNPYARQ GRAGRLSWMVYESLLGASEASGEPLPGDSYNEGYGLLAERLEYDAGKTWVIFHMRPEA KFADGTPVTAHDVVFSHNLFLEQGLKSYADAVKRRVLSAEALDDHTVKFTFAEGISRR SLIDQVGGTPVFPRKWYEDTGARLDEPRLEAAPGSGPYQVKSYDVNRNIVYERNPEYW GWHLPINKGRHNFDRIRIEYFADDNAAFEAFKAGIYTFRPEGNSKTWATGYDFPAANA GYVVKAELPDGLPPTPSGFVFNLGREKLQDKRVRQAIALGFNFEWTNSSLQYDLFKQR HSFVQDTPLEAKGAPEGAELALLQSLGDIVPEEMLTATAVMAHTSDGERLNDRRNLRA AMKLLDEAGWAVGGDGKRRNAAGEVLKIEIPISASGSATMSAVVESFVSNLQLMGIEA KFDKIDAAQYTARERDRDYDLIFDSYVAFLEAGTGLHQRYGSKEAAFSLFNPAGLASP MIDAIIDRALESASKEEQDVALTALDRALRYEFFMIPTWYLDKSWVAYWDMYAYPDPL PPYATGVLDFWWYDADKAQALKDAGAL" gene 303084..304178 /locus_tag="RTM1035_01430" CDS 303084..304178 /locus_tag="RTM1035_01430" /note="COG4174 ABC-type uncharacterized transport system, permease component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="jcventer:1101493006646_RTM1035_01430" /db_xref="CDD:33914" /translation="MGAYILRRLLLIVPTLFGIMVINFALVQFVPGGPVEQMIANMQG QGNVFESFSGSGSDTGQEMVGAAGGNDQYLGARGLPPELIKELEEQFGLDKPPLERFF NMMWNYMRFDFGESYFRKIEVLDLVLEKMPVSITLGLWSTLIAYIVSIPLGVAKAVRD GTKFDTWTSGVIIVAYAIPAFLFAIMLLVLFAGGSYFQIFPLRGLTSDNFEQLSLLGK IGDYLWHIALPVLASTISAFATLTLLTKNSFLDEIKKHYVMTARAKGLSERKVLYGHV FRNAMLIVIAGFPAVFIGVFFGGSVLIETIFSLDGLGRLGFEAAVGRDYPVMFGTLFL FGLIGLVVGILSDLMYVLVDPRIDFEKREG" gene 304183..305292 /locus_tag="RTM1035_01435" CDS 304183..305292 /locus_tag="RTM1035_01435" /note="COG4239 ABC-type uncharacterized transport system, permease component" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide uptake family ABC transporter, permease protein" /protein_id="jcventer:1101493006646_RTM1035_01435" /db_xref="CDD:33962" /translation="MIRLSPLNQRRWRNFRRNNRAYWSLILFSVIFTITLFAEFVAND KPILVQYRGELYMPIFRFYPETEFGGDFETEAIYRDPEVRCLIASGGLDICFDDPEGV IADAEDGVVEGEEIAKGWAIWPPIPYSYNTTVDRPGAAPLPPNGQNLLGTDDTKRDVL ARVIYGFRLSVLFTLIVTALSSVIGIAAGAVQGYFGGRTDLIFQRIIEIWASTPQLYV IIILFAILPRSFWLLVVITVLFGWMALVGVVRAEFLRARNLEYVRAAKALGVSNLTIM FRHMLPNAMVATLTMLPFVITGTISLLAGLDFLGFGLPSSAPSLGELTLQAKQNLQAP WLAFTAFFAFAIMLSLLVFIFEGVRDAFDPRKTFE" gene 305295..306884 /locus_tag="RTM1035_01440" CDS 305295..306884 /locus_tag="RTM1035_01440" /note="COG4172 ABC-type uncharacterized transport system, duplicated ATPase component" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01440" /db_xref="CDD:33913" /translation="MLEVKDLRISFRQDGQVIPAVKGVSFSVDRGETVALVGESGSGK SVTALSTVSLLGSSAQVTGSVTYAGQEMVGADERRLRQVRGNDISFIFQEPMTSLNPL HTLEKQLRESLELHQGLTGDAARGRIVELLERVGIRDAASRLGAYPHQLSGGQRQRVM IAMALANKPDILIADEPTTALDVTIQAQILELLAELKREEGMGLLFITHDLGIVQRIA DRVCVMKDGEIVEAGPVADVFAAPQHAYTRKLLSARAVGLPSPVTEGAPVVAETHDLR VWFPIQKGFLKRTVGHVKAVNAATLSVRAGETLGIVGESGSGKTTLALAIMRLIASEG GIRFAGEDVNGWSTRELRRRRAEMQIVFQDPFGSLSPRMTAAQIIAEGLGVHGNPDGR PERDLVAEVMDEVGLNPAMMDRYPHEFSGGQRQRIAIARAMILRPKLVVLDEPTSALD MTVQVQIVDLLRELQRKYALAYLFISHDLHVVRAMSHRVMVMKDGDVVEAGDAETLFT APQTDYARKLLAAALEGRTEV" gene complement(306890..308245) /locus_tag="RTM1035_01445" CDS complement(306890..308245) /locus_tag="RTM1035_01445" /note="COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /protein_id="jcventer:1101493006646_RTM1035_01445" /db_xref="CDD:30980" /translation="MDTKTQLGKLGLFDAKVPRYTSYPTAPHFNRDVGQDQFTSWINA IPEGAEISLYVHVPFCRRLCWFCACRTQGTQTDAPVAAYLETLKTEIAMLGRQLPRGV RLSRLHWGGGTPTLLSPGMMSELAGAIRDIAPFTDTTEFSVEIDPNEIDAARLDALAG AGMNRASIGVQDFDEQIQKSIGRIQGYDITRHAVDEIRARGVKSLNADILYGLPHQNR ARITESVQKLLSLNPDRVALYGYAHVPWMAKRQQMIPSDALPTPQERLALFETARRLF LWDNYDEIGIDHFATASDGLSVAQKSGLLRRNFQGYTDDTAEVLIGLGASSISRFPQG YAQNAPATGAHTGAIRDGRFSTTRGHIFSPEDKLRSRMIEMLMCDFRIDSTEIFREFA IPAAELQAMLSAVERRFDGHLKLDATGLSIPLEARPLTRMIARQFDTYEMNADGHSSA I" gene 308329..309075 /locus_tag="RTM1035_01450" CDS 308329..309075 /locus_tag="RTM1035_01450" /note="COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /codon_start=1 /transl_table=11 /product="transcriptional activator protein FnrL" /protein_id="jcventer:1101493006646_RTM1035_01450" /db_xref="CDD:31008" /translation="MLKEKASIIPHECGDCPIRHRAVCARCESDELALLDQIKYYRSY ESGQTLIWSGDPMDFVGSVVSGIATLTQTMEDGRTQMVGLLLPSDFVGRPGRSSAAYD VVAVTDMVMCCFRKKPFEEMMVRTPHIAQRLLEMTLDELDAAREWMLVLGRKTAREKI ASLMAIIARRDATLNMNGTRGPLVFDLPLTREAMADYLGLTLETVSRQVSALKKDGVI ELEGKRRVTVPDFNRLLEEAGDDSDGGMLI" gene complement(309167..310006) /locus_tag="RTM1035_01455" CDS complement(309167..310006) /locus_tag="RTM1035_01455" /note="COG0589 Universal stress protein UspA and related nucleotide-binding proteins" /codon_start=1 /transl_table=11 /product="universal stress protein family protein" /protein_id="jcventer:1101493006646_RTM1035_01455" /db_xref="CDD:30165" /translation="MTYNSLFSVLTDESLVEETLAHATSMAARYDAHLDVLCLGVDRS QSGYYYSGASAIVLQETIARAQQEATAIETKARALLKNSSLRWAVEAGVSQLADLGRH VAARARFSDLVILAQPYGKGRGAELEPATESALFEARTPVIIAPAGGEPVPNPGRIMI GWNESNEALGAVRAALPLLKEADVVHVVVIDPPTHGPNRSDPGGLLSQYLARYGVKVE IDVLSKTLPRVSDVLLRHARDMDADMVVMGAYGHSRFREAIFGGATRYMLEQATMPVF MAH" gene 310209..311813 /locus_tag="RTM1035_01460" CDS 310209..311813 /locus_tag="RTM1035_01460" /note="COG3278 Cbb3-type cytochrome oxidase, subunit 1" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, cbb3-type, subunit I" /protein_id="jcventer:1101493006646_RTM1035_01460" /db_xref="CDD:33089" /translation="MTNYIKLIVLGLVTLLALIAANYARDLAYLVNALTVALVAGGLF LWTLRHTDEPKSQVDLSGEYMDGVVRAGVIATAIWGVVGFLAGTFIAFQLAFPGLNFD WAQGYANFGRLRPLHTSAVIFAFGGNALIATSFYVVQRTSAARLWGGNLAWFVFWGYQ LVIVLAATGYLLGATQSKEYAEPEWYVDLWLTVVWLAYLAVFLGTIVKRKEPHIYVAN WFYLSFIITVAMLHVVNNLSIPVSIFGSKSVQVFSGVQDAMTQWWYGHNAVGFFLTAG FLGMMYYFVPKQAERPVYSYKLSIIHFWALIFIYIWAGPHHLHYTALPDWASTLGMVF SIVLWMPSWGGMINGLMTLSGAWDKLRTDPVIRMMVISIGFYGMSTFEGPMMSIRAVN SLSHYTDWTIGHVHSGALGWNGMITFGALYFLVPKLWNRERLYSLSLVSWHFWLATIG IILYAAAMWVTGIMEGLMWREVDANGFLVNSFADTVAAKFPMYVVRGLGGVLFLSGAL IMCYNLWMTVTRSPAVAPVNSAVPAE" gene 311828..312553 /locus_tag="RTM1035_01465" CDS 311828..312553 /locus_tag="RTM1035_01465" /note="COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, cbb3-type, subunit II" /protein_id="jcventer:1101493006646_RTM1035_01465" /db_xref="CDD:42410" /translation="MAILDKHAILEKNVTLLAIFAFLVVTVGGIVQIAPLFWLENTIE DVEGMRPYSPLELTGRDIYIREGCYVCHSQMIRPMRDEVERYGHYSLAAESKYDHPFQ WGSKRTGPDLARVGGRYSDDWHVDHLRDPQSVVPESVMPKYGFLENRMIEPAHIEDLL KTHRLVGVPYSDEMIENAKADFMVQIDPDGDTEGLLARYPKAQVRNFDGQPGISEADA LIAYLQMLGTLVDFSTFTPDASR" gene 312566..312760 /locus_tag="RTM1035_01470" CDS 312566..312760 /locus_tag="RTM1035_01470" /codon_start=1 /transl_table=11 /product="Cbb3-type cytochrome oxidase component" /protein_id="jcventer:1101493006646_RTM1035_01470" /db_xref="CDD:45442" /translation="METYSLLREFADSWMLLALFTFFVGVVFWVFRPGATKSYENPST IPFRHEDKPAPTNGARHEEA" gene 312764..313636 /locus_tag="RTM1035_01475" CDS 312764..313636 /locus_tag="RTM1035_01475" /note="COG2010 Cytochrome c, mono- and diheme variants" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, cbb3-type, subunit III" /protein_id="jcventer:1101493006646_RTM1035_01475" /db_xref="CDD:32193" /translation="MAKQPNKKNQEVETTGHQWDGIEEYNNPLPRWWLWTFYACIVWA LWYVVAYPAWPLVQGATAGYKGWSTRANVAVELAEAEAANAEINARLASVELTEIAGD PELQGYATSAGNAVFKTWCAQCHGSGAAGVQAGGYPNLLDNDWLWGGTIEDIHATIAH GIRNEEDPDARYSQMPAFGDILESAQIDQVVNYVMSLSGEPQDATLVSDGQAVFMDNC AACHGEAAEGDIYQGAPNLADAIWLYGGSFDTIKETVIYSRFGVMPAMGGADLSEAEI RAVAIYVHQLGGGE" gene complement(313800..313994) /locus_tag="RTM1035_01480" CDS complement(313800..313994) /locus_tag="RTM1035_01480" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01480" /translation="MMNTEMPDRKDETMLGILANTFMNATRMDQAPPRQTPLHWPPAD RFGTRTGAEIEAHLIGRRRY" gene 314054..314944 /locus_tag="RTM1035_01485" CDS 314054..314944 /locus_tag="RTM1035_01485" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006646_RTM1035_01485" /db_xref="CDD:30928" /translation="MMDWLSLPPLTALRAFAALAETGGTVAAGDRLNVSHAAVSQQIK QLEAHIGLALVDRSGRQLRLTAEGQYLADALSLGFGAIARAVESLSQRNSERPLQIST TPSFAAHWLMPCLGDFRHRHPDIDLMIDPTPRLVALEPGGIDIAIRYGPGKWPGLEAE LLFSSPIVAVAAPRLIEGRRIEEPSDLADLPWLQEFGTNEASDWLRRRGVTRERAAGL MQVPGNLLLDGLRDGQGVAVTVLDWVRQDIAAGRLRLLFQDHEDSGYHVVARPGVLRP AARTFVVWLRRMARQHSVAQ" gene complement(314958..315026) /locus_tag="RTM1035_01490" CDS complement(314958..315026) /locus_tag="RTM1035_01490" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01490" /translation="MIILLIVFCQDAGATALTCIKF" gene 315035..316477 /locus_tag="RTM1035_01495" CDS 315035..316477 /locus_tag="RTM1035_01495" /note="COG0348 Polyferredoxin" /codon_start=1 /transl_table=11 /product="iron-sulfur-binding protein, RdxA/RdxB/FixG family" /protein_id="jcventer:1101493006646_RTM1035_01495" /db_xref="CDD:30696" /translation="MSVADSHPTEPQSLYAAREPVFPKKVYGKFRNLKWVIMIVTLGI YYVTPWIRWDRGAALPDQAVLLDLANRRFFFFWIEIWPHEFYFVAGLLVMAGLGLFLF TSALGRVWCGYACPQTVWTDLFILVERWIEGDRNARLRLHRQKKWDVRKARLRLTKWI TWLLIAVATGGAWVFYFTDAPTLLVDLFTLDAHPIAYTTIVVLTGTTFFFGGFAREQI CIYACPWPRIQAAMMDEDTLTVGYREWRGEPRKNSEAVKEGAPQGDCIDCMACVNVCP VGIDIRDGQQLECITCALCIDACDDIMAKIGKPRGLIDYMAFTDEEAERAGGKPKPIF KHILRPRTILYTALWSLVGIGLVFALFIRSDIDLTVAPVRNPTYVTLSDGSIRNTYEV RIRNMQHETREFEVTVKGSPAIAVELEGAEAGRISVAADEMYLQRVYLVAPPGSEPAT AERSDVRIWIEDLTNGERAYKDTVFNGKGE" gene 316474..316932 /locus_tag="RTM1035_01500" CDS 316474..316932 /locus_tag="RTM1035_01500" /codon_start=1 /transl_table=11 /product="fixH protein, putative" /protein_id="jcventer:1101493006646_RTM1035_01500" /db_xref="CDD:45646" /translation="MMAERQITGRHVLIGFVGAFSVIIGVNLVLAYSAVRTFPGLEVK NSYVASQEFNERKAAQEGLGWTVVADHAGGLLMLHITDVAGNPVEVAQLEATVGRATH VQDDQTPDFSYDGQAYVAPMDLGDGNWNIRMKAWDRDGTLFQQRVVLHKE" gene 316936..319119 /locus_tag="RTM1035_01505" CDS 316936..319119 /locus_tag="RTM1035_01505" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="copper-translocating P-type ATPase" /protein_id="jcventer:1101493006646_RTM1035_01505" /db_xref="CDD:32399" /translation="MTATMRPSSSACPACAAAPAAEALAASALPRAQIALSLPTIHCS ACISKIERALAADSRVNSARVNLTLKRASIDAAPGVTAEEMRTLVEGLGYEAYELDQG TLNATANDRAGRDLLMRLAVAGFASMNVMLLSVSVWSGAEDATRDMFHWISAAITLPA IAFSGVPFFRNAWAALRNGRLNMDVPIVLAIVLAIITSLWETMLSGHHAYFDAAMALT FFLLAGRYLDHRTRAIARSAAEELTALEVPRATRLLDGVEDVVNVAQLAVGDLILVRP GGRMPVDGEIVSGTSEIDRSLLTGETLPVFAGLGQVVSAGEVNLTGPLTIRATAVGRE TSLHRMADLVAIAESGRSRYTSLADSAAKLYAPGVHILAGLSFLGWYLYTWDVRTALN IAAAVLIITCPCALGLAVPAVTTAASGRLFRRGMLIKHETALERLAQVDTVVFDKTGT LTTGAPQVTNLDDLPREALELALGLAQGSSHPLAQSITRAARAAGIVAADLTDLTEVP GYGTKASYMGQEIRLGRASWTGAQGRAETATFLKVADQAPLAFTFADALRPGAAEAVQ GLMDQGKRVILISGDTTPAVEALATRLGIPQWMAEALPADKAARVAALTAEGAHVLMV GDGLNDTAALAGAHVSISPATALDAARVASDIVLLGNDLAPISAACVTAKSATRRIRE NFQIATVYNVIAVPLAVVGLCSPLIAALAMSLSSITVSLNALRLR" gene 319123..319281 /locus_tag="RTM1035_01510" CDS 319123..319281 /locus_tag="RTM1035_01510" /note="COG3197 Uncharacterized protein, possibly involved in nitrogen fixation" /codon_start=1 /transl_table=11 /product="cytochrome oxidase maturation protein, cbb3-type" /protein_id="jcventer:1101493006646_RTM1035_01510" /db_xref="CDD:43521" /translation="MNILTYLIPISLILGGVGLVAFVYTVRSNQYDDPEGDSRRILSD DWDDRPKP" gene complement(319347..320744) /locus_tag="RTM1035_01515" CDS complement(319347..320744) /locus_tag="RTM1035_01515" /note="COG1686 D-alanyl-D-alanine carboxypeptidase" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase family protein" /protein_id="jcventer:1101493006646_RTM1035_01515" /db_xref="CDD:31872" /translation="MLVIVPLSAVAAPYAALVMDARNGEVLYSNNADTRLHPASLTKM MTLYVVFEAIENGEIGLDDKVVISKHAASEPPSKLGVRAGSSIALRYLIRAAAVKSAN DAATALGEAIEGSEAQFARRMNRTAEALGMTRTTFKNAHGLTENGHLSTARDMTILGR HLFYDFPQYYNLFSRITTDAGVTSVSHTNRRLLEAYRGADGIKTGYTRAAGFNLTASA ERNGERIIATVFGGQSTASRNAKVAELLDLGFNKAPTQVAVHRPARPPYLGKLGTAPV MIAAGEDRPSVAAKTVRLTTAAAVVKSLRPQSRPLPAAPIPAIAARDDIERALLAAQQ VATATTEPAPLPQGSAAVTPEIRPEQRPTEIVLASAPAPEPEPEVVTRVSTSGGRHWG INVGRYSSEYKARQMLLQTALNEMATLDGSLRKVVQRPAGFDANFMGMTRESADLACR RLQAKKVTCFMIGPS" gene complement(321030..321968) /locus_tag="RTM1035_01520" CDS complement(321030..321968) /locus_tag="RTM1035_01520" /note="COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01520" /db_xref="CDD:31059" /translation="MAQAADDLTLQLKWVTQAQFAGYYVALDKGFYEEEDLDVTIKPG GPDIAPTQVIAGGGADVTVEWMPAALSAREKGLPLVNIAQPFKSSGMMLTCLKETGVT GPADFPGRTLGVWFFGNEFPFLSWMSQLGIPTEGGADGVTVLKQGFNVDPLLQKQADC ISTMTYNEYWQVIDAGITEDQLITFKYEDQGVATLEDGLYVLEEKLSDPAEVDKLTRF VRASMKGWKWAEENPEEAAMIVLDNDATGAQTEEHQIRMMTEVAKLTAGSNGALDPED YERTVQSLLSGGSDPVISAHPGDGAWTHVISDAALN" gene complement(322054..322899) /locus_tag="RTM1035_01525" CDS complement(322054..322899) /locus_tag="RTM1035_01525" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="jcventer:1101493006646_RTM1035_01525" /db_xref="CDD:30945" /translation="MGWLALGVLTWALGWAVNSRLSHGPKTRATRLLVPVIFGLTIVV IWECLVRGLSISPVLLPAPTAIAATFAKSTHILWADFVQTALKGALTGYVMGCGAAFL TAIAIDRFPFLQRGLLPVGNFVAALPIIGMAPILVMWFGFDWQSKAAVVVVMVFFPML VNTVQGLTDTDAMQRDLMRTYAAGYWQTLFKLRLPAAMPFIFNGLKIATTLALIGAIV AEFFGSPIKGMGFRISTSVGQLALDLVWAEIVVAAIAGSGFYGAVALVEKAVTFWHPS QRSRA" gene complement(322899..323774) /locus_tag="RTM1035_01530" CDS complement(322899..323774) /locus_tag="RTM1035_01530" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit" /protein_id="jcventer:1101493006646_RTM1035_01530" /db_xref="CDD:30945" /translation="MMRNLLPVLTIVATLLALWYAAAVALNAQWARDQAARAEVTLTL PDLIADTWSQDKPKLPAPHQVAVEIWNTTGAMVLEGRGFSKRSLFYHSWITFSATALG FVLGTALGVALAIGIVYNRTMDMSVMPWVIASQTIPILAIAPMIIVVLNAVGISGLLP KAMISMYLSFFPVVVGMVKGLRSPTPMQLDQMRTWNASASQTFWRLRLPSSMPYLFTS LKVGMAASLVGAIVGELPTGAVAGLGARLLAGSYYGQTIQIWSALIMAATLAAVLVGL IGLIQRITLKRMGMT" gene complement(323823..324608) /locus_tag="RTM1035_01535" CDS complement(323823..324608) /locus_tag="RTM1035_01535" /note="COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01535" /db_xref="CDD:31313" /translation="MSSNTVISARDLSLTFQTGDGPVHALKDVSLEVEKGDFVSFIGP SGCGKTTFLRCMADLEHPTGGSLTVNGASAEEARKSRAYGYVFQAAGLYPWRTIGGNI RLPLEIMGYARDDQEARVKRVLELVDLAGFERKYPWQLSGGMQQRASIARALAFDADL LLMDEPFGALDEIVRDHLNEQLLHLWDRTNKTICFVTHSIPEAVYLSTKIVVMSPRPG RITDVIESTLPRVRPLDIRETPEFLDIAHRVREGLRAGHSDDL" gene complement(324704..326167) /locus_tag="RTM1035_01540" CDS complement(324704..326167) /locus_tag="RTM1035_01540" /EC_number="3.5.2.2" /note="COG0044 Dihydroorotase and related cyclic amidohydrolases" /codon_start=1 /transl_table=11 /product="dihydropyrimidinase" /protein_id="jcventer:1101493006646_RTM1035_01540" /db_xref="CDD:30057" /translation="MTTKVIKNGTVVTADRTWKADVLIEGETIKQIGTDLKGDSTIDA TDAYVIPGGIDPHTHLEMPFMGTTAAETFETGTWAAACGGTTMIVDFCLPGADGSIKN AINDWHRKSAPQICSDIGYHMAITDWNENVFTEMKDAVDMGVNSFKHFMAYKGALMIE DDEMFASFKRCAELGALPMVHAENGDLVAEMQQKYFDQGITGPEGHAYSRPPEFEGEA ANRAICIADAAGVPLYIVHVSCEQAHEAIRRARQKGMRVYGEPLVQFLTLDESEYFNK DWDHAARRVMSPPFRSKDHQDSLWAGLQAGSLQVVATDHAAFSTAQKRAGRSDFRIIP NGSNGLEERLAVLWTHGVETGRLTLNEFVAVTSSNVAKILNIYPKKGAIVEGADADLV VWDPKITKTISASNHHSILDYNVFEGFEVKAQPRYTISRGEVIWAWGQNSQPQPGRGR FVPRPAFPSAHQALSKWKALTAPKMIQRDPLNIPAGI" gene complement(326247..327497) /locus_tag="RTM1035_01545" CDS complement(326247..327497) /locus_tag="RTM1035_01545" /note="COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /codon_start=1 /transl_table=11 /product="N-carbamoyl-L-amino acid amidohydrolase" /protein_id="jcventer:1101493006646_RTM1035_01545" /db_xref="CDD:30969" /translation="MSAPGENLKINSTRLWDSLMEMAKIGPGIAGGNNRQTLTDEDAE GRALFQTWCTAAGLTMGVDEMGNMFARREGTDPQALPVYVGSHLDTQPTGGKYDGVLG VLAGLELIRTLNDLDIKTKHPIVLTNWTNEEGTRFAPAMLASGVFAGVMDRDWAYDRV DAKGKRFGDELERIGWKGPEKVGARQMHAFFELHIEQGPILEAEGKQIGVVTHGQGLR WIECTVTGKGQHTGSTPMYMRRNAGRGLARVTELVHEIALQYQPNAVGAIGHIDVYPN SRNVIPEKVVFTVDFRSHVLETLEAMAEELMSTAPGICADVGVKFSAEVVGAFDPPAF DETLTARVRDAADRLGYSHMDIVSGAGHDACWINKVYPTTMVMCPCKDGLSHNEAEEI TPDWARAGTDVLLHAVLETAEVVE" gene 327644..328291 /locus_tag="RTM1035_01550" CDS 327644..328291 /locus_tag="RTM1035_01550" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family protein" /protein_id="jcventer:1101493006646_RTM1035_01550" /db_xref="CDD:31500" /translation="MLQSPAAQAGRKSSRIQVRNRKRILEAALEVFSTHGYRGATLDQ IAAEAGLSKPNILYYFEGKEEIHVTLLNQLLDAWLAPLRAIDPQGEPLDELMGYVHRK LEMSRDLPRESRLFANEILQGAPRMVPHLDSVLKPLVDQTAAVIEGWCVQGKLAPVDP RHLLFSIWATTQHYADFEAQVGVLMGEVDVHTGAAAHLEALFRRLLTPGSIVENS" gene 328408..328977 /locus_tag="RTM1035_01555" CDS 328408..328977 /locus_tag="RTM1035_01555" /note="COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose 3,5-epimerase" /protein_id="jcventer:1101493006646_RTM1035_01555" /db_xref="CDD:40985" /translation="MQIEQTNLPGVVILTPARHGDTRGFFSESWNRRRMQEAGITIDF VQDNHSLSEQVGTVRGLHFQSPPHAQAKLVRCGRGALYDVAVDIRRGSPTYGQWVGVD LSFENGRQLLIPEGFLHGFVTRAPMTEIIYKCSDYYAPECDGAVRFDDPEIGIDWGID PAAAVLSGKDAKAPLLREFVSPFVYEATV" gene 328974..330023 /locus_tag="RTM1035_01560" CDS 328974..330023 /locus_tag="RTM1035_01560" /note="COG1088 dTDP-D-glucose 4,6-dehydratase" /codon_start=1 /transl_table=11 /product="dTDP-glucose 4,6-dehydratase" /protein_id="jcventer:1101493006646_RTM1035_01560" /db_xref="CDD:31285" /translation="MRLLITGGAGFIGSAVVRLAVARGHVVINLDALTYAACLENVAS VAQSPLYSFVHADIRDRAALDRVFATHAPDAVLHLAAESHVDRSIDGPGTFVETNITG TYNLLEAARGYWQARNKPEGFRFQHISTDEVYGSLPSDPRIKFTEDTPYDPRSPYSAS KAASDHLVRAWHETYGLPILITNCSNNYGPFHFPEKLIPVIILNALAGKPLPIYGDGS NVRDWLYVEDHAEALLTVLERGVPGRSYNIGGENELSNLDLVRKLCAVLDELAPRDDG LSYAAQISFVTDRPGHDARYAIDPTRIRGELGWRPSVTVDEGVRRTVRWYLENEAWWR ALLARDGVGKRLGAG" gene 330048..330893 /locus_tag="RTM1035_01565" CDS 330048..330893 /locus_tag="RTM1035_01565" /note="COG1091 dTDP-4-dehydrorhamnose reductase" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose reductase" /protein_id="jcventer:1101493006646_RTM1035_01565" /db_xref="CDD:31288" /translation="MRILVFGRTGQVATEMQRQAEVTALGREVADLSDPMACAEAIRD HAPDLVINAAAYTAVDRAESEEDLATVINGVAPGAMARACANLGIPFCHVSTDYVFDG SGAAPRAPSDPVAPCNAYGRSKLAGEEAVRAAGGQAAILRTSWVFSAHGGNFVKTMLR LSETRDALSVVDDQIGGPTPAADIAAALLSMGRAMVAGHAGGLYHFSGAPDASWADFA REIFAQAGRVTVVTGIPTRDYPTPAARPQNSRLDCGSLAAEFGIGRPDWRAGLARVLK ELEQA" gene 330890..331783 /locus_tag="RTM1035_01570" CDS 330890..331783 /locus_tag="RTM1035_01570" /note="COG1209 dTDP-glucose pyrophosphorylase" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate thymidylyltransferase" /protein_id="jcventer:1101493006646_RTM1035_01570" /db_xref="CDD:31402" /translation="MTTARKGIVLAGGSGTRLYPITMGLSKQLLPVYDKPMIYYPLTA LMLAGIREIAIITTPQDQAQFQRLLGDGSQWGLTFEYIEQPSPDGLAQAYLLAEGFLG GQASALVLGDNIFYGHGLPQQLERAAQQEKGGTVFGYRVADPERYGVVEFDGAGRAVS IVEKPQEPKSDFAVTGLYFLDGEASERAKAVQPSERGELEITALLEMYLRDGLLSVEM MGRGYAWLDTGTHASLLDAGNFVRTLEQRQGQQVGCPEEIAYDKGWIDAAALEARVAL FKKTDYGAYLGRLLQGGRVKG" gene 331787..332725 /locus_tag="RTM1035_01575" CDS 331787..332725 /locus_tag="RTM1035_01575" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="glycosyl transferase, group 2 family protein" /protein_id="jcventer:1101493006646_RTM1035_01575" /db_xref="CDD:40622" /translation="MDGPQAPHVVILLAVYNGGDFLSDQLQSIARQTHDDWQVLASDD GSKDSSRKILEGFAATHPVTCLSGPGAGAATNFLSLIRQTPGHAPAGHWMAFCDQDDV WLPDKLSRGITALSTSDDPRPALYCSRTWITDTALGERRLSAARPRPPSFRNALVQNV ASGNTILLNPAAARLVEEAAQKIERVVVHDWWVYQLITGAGGRVVHDDTPTLYYRQHD VNQIGSNDTRLARLRRIRQLLQGHFRAWNEVNIAALSRLDGYLTPENRAILAEFAAMR RGPMPARLARLWRLGLYRQSRISTFALWVSLVLNRI" gene 332806..333414 /locus_tag="RTM1035_01580" CDS 332806..333414 /locus_tag="RTM1035_01580" /EC_number="2.5.1.17" /note="COG2109 ATP:corrinoid adenosyltransferase" /codon_start=1 /transl_table=11 /product="cob(I)yrinic acid a,c-diamide adenosyltransferase" /protein_id="jcventer:1101493006646_RTM1035_01580" /db_xref="CDD:32292" /translation="MTDDPDRHAMKMAKKKAARDKIMATKTDQKGLIIVHTGKGKGKS SAAFGMIFRCIAHGMPCAVVQFIKGGMSTGERDLILSKFSDACAFHTMGEGFTWETQD RTRDTEMAQAAWAKAKELIRDETNKMVLLDEINIALRYDYLDINEVVQFLAEEKPHMT HVVLTGRNAKDELIEIADLVTEMELIKHPFRSGIKAQIGVEF" gene 333418..333765 /locus_tag="RTM1035_01585" CDS 333418..333765 /locus_tag="RTM1035_01585" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01585" /translation="MARTRLLTEFGMGTSLRRQDYTEAAARAVRDALWHNSINLAELF GFEKADMLIDLDIAVQAPEEVDVEVLRAIFPYGQVRVQVARGGLDIPRAVGKPTVIAN ACISVSFDMEAKA" gene 333762..334127 /locus_tag="RTM1035_01590" CDS 333762..334127 /locus_tag="RTM1035_01590" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01590" /translation="MSAQRFIIEMGMGNDLHGMDYQKAAVRAIEDAIRHSTIPMFLNT PLDHQDMAVKVTVGVQEPERVDPEVLKAGLPRGRATVQVVFGGQNVTDPGSGETLVIA TAAVEAFFPSQVGKWVLGA" gene 334230..334997 /locus_tag="RTM1035_01595" CDS 334230..334997 /locus_tag="RTM1035_01595" /note="COG2186 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase complex repressor" /protein_id="jcventer:1101493006646_RTM1035_01595" /db_xref="CDD:32369" /translation="MPFQKVTPEKLSTAVTRQIEKLVLQGILRPGERLPAERDLAEKL GVSRPSLREAVAELQDKGLLSARAGAGIYVADVLGSAFSDALIRLFAEHDEAVFDYIG FRRDLEGLAACRAARLASDTDLQVIQTLMDKMEAAHRKTNPADEARLDAEFHMAIIEA SHNVIMLHMMRSMFQLLREGVFYNRQVMFKQRTTRGALLDQHRAINAAIQARDPEAAR AAVNDHLNYVEKALADQQKADRNEAIAKQRYEHEQSR" gene complement(335007..336098) /locus_tag="RTM1035_01600" CDS complement(335007..336098) /locus_tag="RTM1035_01600" /note="COG0535 Predicted Fe-S oxidoreductases" /codon_start=1 /transl_table=11 /product="pyrroloquinoline quinone biosynthesis protein PqqE" /protein_id="jcventer:1101493006646_RTM1035_01600" /db_xref="CDD:30881" /translation="MANPPIAMLAELTHRCPLSCPYCSNPVELTARETELSTADWVSV FQQAADLGVLQLHLSGGEPASRRDLEELIKAARDAGLYTNLITSGIGLTEKRLAALDD AGLDHIQLSLQGTDAEMADRIGGYMGGFDRKMQVAKWIAAIGFPLTLNFVMHRGNMHQ LPRAIEMAQDMGARRIEVATVQFHGWAMLNRGALMPDRAQAREASRIVAEARAALKGR LVIDYVPADYHADYPKTCMGGWATTGLNVAPDGLVLPCHAAQTIKTLTFDNVRDRPLA DIWHNGAAFNAFRGTDWMQEPCRSCERKTIDFGGCRCQAMAIAGDPAATDPVCIKSPH HAQMRSLAEDFSGQSDADLTWRVMEKTPL" gene complement(336100..336372) /locus_tag="RTM1035_01605" CDS complement(336100..336372) /locus_tag="RTM1035_01605" /codon_start=1 /transl_table=11 /product="coenzyme PQQ synthesis protein D" /protein_id="jcventer:1101493006646_RTM1035_01605" /db_xref="CDD:45302" /translation="MTPDSIPHLPRGVRLHYDRVREDWVLLAPERAVRLDPIGHAILS RVDGVQSFGALTADLAATYNAPLDDVTRDSAEFLQGLAERRFLEMR" gene complement(336369..337118) /locus_tag="RTM1035_01610" CDS complement(336369..337118) /locus_tag="RTM1035_01610" /note="COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C" /codon_start=1 /transl_table=11 /product="pyrroloquinoline quinone biosynthesis protein PqqC" /protein_id="jcventer:1101493006646_RTM1035_01610" /db_xref="CDD:45213" /translation="MTPTRDAFEARLRQIGAERYHDRHPFHHMLHGGHCTPDQVRAWV INRYYYQSRIPMKDAAFLSRVDDPDLRRIWRSRIEDHDGTAENEGGIRRWLRLAQAVG LDPDYVASAQGVLPATRFAVDAYVAFVREKPLLEAVAASLTELFAPKIHAQRIEGLLA NYAFADDSSLAYFRNRLKEAPKDVAFGLKWVLDRADTTEKQDAAAAALTFKTDVLWSQ LDALSSAYVDPARIPPGAWHPGEGLLAKGAA" gene complement(337115..337882) /locus_tag="RTM1035_01615" CDS complement(337115..337882) /locus_tag="RTM1035_01615" /note="COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I" /codon_start=1 /transl_table=11 /product="pyrroloquinoline quinone biosynthesis protein PqqB" /protein_id="jcventer:1101493006646_RTM1035_01615" /db_xref="CDD:31428" /translation="MTTDGVRWVVLNASPDIRAQLAANPALHPRSLRDTPIAGVLLTN GDIDHVAGLLSLREQQPFTLYATGEIHGVLADNPLMQAVDPARVPRVPIALNQPVPLL PGLTATLFAVPGKVPLYLEGETVQTDLEGEQTTGVHLEAEGRNIFYIPGCAAVTDRLA ERLRGADMVFFDGTLWRDDEMITMGLSQKTGRRMGHISMSGPDGSIAALRDLGIGRKI YVHMNNSNPVLRPDASERAEAESAGWTIGQDGMEITA" gene 338338..338541 /locus_tag="RTM1035_01620" CDS 338338..338541 /locus_tag="RTM1035_01620" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01620" /translation="MIELLFVACLARQPEICEERAFQYTDRTARGCMAEAIPELSKWA ATHPRWRIARWSCQPLGGARTRA" gene 338574..339191 /locus_tag="RTM1035_01625" CDS 338574..339191 /locus_tag="RTM1035_01625" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01625" /translation="MLAVGPVLAGTAHEGYDLIFRTGTLEDFAPGDALHYQSETENAA APPEAQGAQGYDLRIEEGGTARLMRVLDTGQQPVAGFDATVGNPMAMFFLERLVRDLA QATGGSTFYIRNRIKESLLAPVGISPVQVTWQGKDHAGQEVLLAPFVGDANAARLGPF AELQVVFEVSETVPGWYHSMRAETPERDSGGRYFSSTLALSETEE" gene 339188..339535 /locus_tag="RTM1035_01630" CDS 339188..339535 /locus_tag="RTM1035_01630" /note="COG0402 Cytosine deaminase and related metal-dependent hydrolases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01630" /translation="MRCLAILLCLFPTMGLAQSVADQLNDYPTEARADYVFGCMAANG NTREMLRRCSCSIDEIAAILPYKDYVSAETVLALRQGNGERMSMFKAGPVSEGIVADL RRAQAEAEIICFK" gene complement(339542..340375) /locus_tag="RTM1035_01635" CDS complement(339542..340375) /locus_tag="RTM1035_01635" /note="COG5501 Predicted secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01635" /db_xref="CDD:35060" /translation="MPDPEAQMTRFPMTALCLSLTLGTAALAEEPRNPLQDGETWDYL RADILDANKALSPGAVFAVDAPYRAHDAATVPVVVTQTDQSVGPITTLKIVVDENPAP LAAEIKFGPAMAPLSFEARVRVNAYSNLRVIAETASASYLDGRFVKAAGGCAAPATRD PEVALAHMGEMRLRHFDSAPVQIGSRRDAQLMIRHPNYSGLQRDQITQLFVPAHFIQD LTVWQGDEMLFSLTGGISISEDPVFRFSYTDNGTPDLRIRAEDTEGNVFEEVLPKASA S" gene 340454..341485 /locus_tag="RTM1035_01640" CDS 340454..341485 /locus_tag="RTM1035_01640" /note="COG0491 Zn-dependent hydrolases, including glyoxylases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01640" /db_xref="CDD:40833" /translation="MFEIVLSLCLLANPETCETRLLPVGAQDCAQAVERAEEIAPDWG DAVIAGPFDCVARPNSGMAFAQIAPGVFVHRGQVADVTPDNLGDVANIGFIIGEDSVA VIDAGGSRAVGEAVYLAVRQITEKPISHLILTHMHPDHVMGAEVLIEAGAQVVGHRKL GQALAARAETYETSFARLMGAGFIGSRVPTVGEGIADRAEIDLGGRMLDLVAWETAHS ESDVTVFDRQTATLFTGDLVFDAHSPALDGSVLGWLRVLEAMGAPAPARIVPGHGGPV LEWPEGVVDLRRYLEVLRDETRAAVSQGLRLGEAIETVGQSEAARWALFDLFHPRNVT AAFTELEWE" gene complement(341492..341986) /locus_tag="RTM1035_01645" CDS complement(341492..341986) /locus_tag="RTM1035_01645" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01645" /translation="MDTLSAAVMWPHPPENQAATPVLSPEAARLAERLALRRLTLEEA ESAVDAAPNLTKDDYTAIFSDVFDRLNQRRGEIMGGITRYARNQARMAEEIEALRGEI ATLTKAESPDFDRIDQLEEDLDWRARVFDDRRRSLTYACETPVLLEKRLYALAQILAA HVPD" gene 342237..343349 /locus_tag="RTM1035_01650" CDS 342237..343349 /locus_tag="RTM1035_01650" /note="COG1062 Zn-dependent alcohol dehydrogenases, class III" /codon_start=1 /transl_table=11 /product="Alcohol dehydrogenase GroES-like protein" /protein_id="jcventer:1101493006646_RTM1035_01650" /db_xref="CDD:31262" /translation="MRTRAAVAVEAGRPMEIMEVNLEGPKAGEVLVEIKATGLCHTDD FTLSGADPEGAFPAILGHEGAGVVLEVGPGVTSLQPGDHVIPLYTPECRECEYCLNPK TNLCQKIRSTQGQGVMPDGTSRFSMLDGTPILHYMGCSTFANHTVLPEIALAKVRKDA PFDKICYIGCGVTTGVGAVINTAKVEIGSRAIVFGLGGIGLNVLQGLRLAGADQIVGV DINPGRIEMATRFGMTDFVNPKEVSGDLVAHLVALTGGGADYTFDATGNVGVMRTALE AAHKGWGESIIIGVAPAGAEISTRPFQLVTGRSWRGTAFGGARGRTDVPKIVDWYMQG KIEIDPMITHTMPLEDINKGFELMHAGESIRSVVIY" gene 343465..345267 /locus_tag="RTM1035_01655" CDS 343465..345267 /locus_tag="RTM1035_01655" /note="COG4993 Glucose dehydrogenase" /codon_start=1 /transl_table=11 /product="putative methanol dehydrogenase protein, large subunit" /protein_id="jcventer:1101493006646_RTM1035_01655" /db_xref="CDD:34598" /translation="MKKSLLMSAAFFVGASGMATANSDLQALIDDPTQWAIQTGDYAN TRYSELEQINKDNVGKLQVAWTFSTGVLRGHEGSPLVIGDIMYVHTPFPNIVYALDLS NNGKIIWKYEPKQDPNVIPVMCCDTVNRGVAYADGKIFLHQADTTVVALDAKSGEVKW TAVNGDPSIGETNTATVLPVKDKVIVGISGGEFGVRGHTTAYDMNTGELVWRAYSMGP DSDTLIDPENTTHLGKPVGPDSGTNTWEGDQWKIGGGSTWGWYSYDAELDLFYYGTGN PSTWNPAQRPGDNRWSMTIMARDPDDGKAKWLYQMTPHDEWDYDGVNEMILTDQEVDG QMRKLLTHPDRNGLAYTLDRETGELLVAEKFDPVVNWTTGVDMDPASPTYGRPAVVAE YSTEQNGEDVNSTGICPAALGTKDQQPSAYSPKTGLFYIPTNHVCMDYEPFRVSYTAG QPYVGATLAMYPAPGSHGGMGNFIAWDNIEGKIKWSIPEQFSVWSGALATAGDVVFYG TLEGYLKAIDASSGDELYSFKTPSGIIGNVMTYEHGGKQYVGILSGIGGWAGIGLAAG LTDPNAGLGAVGGYAALSDYTALGGQLTVFKLPD" gene 345350..345886 /locus_tag="RTM1035_01660" CDS 345350..345886 /locus_tag="RTM1035_01660" /note="COG2010 Cytochrome c, mono- and diheme variants" /codon_start=1 /transl_table=11 /product="putative cytochrome c protein" /protein_id="jcventer:1101493006646_RTM1035_01660" /db_xref="CDD:32193" /translation="MLTPRRLLSAGLTACLALVALPVLGEEAPSPDDPKFAASYEQDG LYFTADDIPTFNVAEDGTVDWQTFSGFRRYHAECHVCHGPDGEGSTYAPALKESAVAM DYYDFYGVVAEGRQKVNASENSVMPSFGTNPNVMCYLDDIYVYLKARGLGVVERGRPA KKEAKSEGIQAAEDACMG" gene 345936..346697 /locus_tag="RTM1035_01665" CDS 345936..346697 /locus_tag="RTM1035_01665" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="putative methanol oxidation protein" /protein_id="jcventer:1101493006646_RTM1035_01665" /db_xref="CDD:47410" /translation="MAELVSQSAFRVCADPANDPMSTEAGTGFENRIADLLAAELERP VEYSWFPMATGFVRRTLGEKRCDVIIGFAQGHELVQNTNHYMTSVYTLILPKTGELSD VVTLADPRLKGKVLGIVAGSPPGTHMARNGLMAKARAYPLFVDRRVQSPASDMLRDLE AGEIAAAVLWGPIGGPLVKREHPDLQVVPLLHEVGAPKMFYRITMGVRLGEDQWKREL NSLIRRNQAEIDAILNDAGVPLLNDMGTEAKVLSQ" gene 346694..347242 /locus_tag="RTM1035_01670" CDS 346694..347242 /locus_tag="RTM1035_01670" /note="COG0607 Rhodanese-related sulfurtransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01670" /db_xref="CDD:29073" /translation="MIRAGLAVLMLLAGPLAAQGVAEPEEYRGEPYRAPVPETLAGAV VVDATAAHVLWQRGEVAFVDVLPRAPKPVNLPAGTIWRDKPRLSIPGSVWLPNTGYER IAPETEAYLRDGLAEVTAGDSGHPVLFFCLEDCWMSWNVAKRALEMGYTKVYWFPEGT DGWAFEDYPLEKIDARPGEPGT" gene complement(347312..348127) /locus_tag="RTM1035_01675" CDS complement(347312..348127) /locus_tag="RTM1035_01675" /note="COG5501 Predicted secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01675" /db_xref="CDD:35060" /translation="MTRLALALAAAMLSGPALAQSAWPDIQSALYGDAPLVVQSAHVS LDAPYRATDDARTVLGGHIVAPPGQKITTVTLVIDENPAPVAAEFHLAAPQAEFAFSL TTRLNGQTPLHLVALTDAGERHMAEAFLKTSGQGACAAPPGTDPVAALANLGEMELAF LPDLTAPSKSVNTRLAALSGKVHALDVDISHPSHSGLAMDQISLLFTPLRVVDELEIN LDNAPYLTMTGSISLSENPRLRVSIPTGTTTANVTLRDTDGTTTSARTSLAAY" gene complement(348129..348647) /locus_tag="RTM1035_01680" CDS complement(348129..348647) /locus_tag="RTM1035_01680" /note="COG1001 Adenine deaminase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01680" /translation="MTRALFLWLLAGFLSASTATAQGLVPLRDGASVAFLGITFIDTS TEGAYNPVRADETARLALVQDYVKTRFAETGFAMLDLDPITTDLATVTNPADCYGCET RLAARLDADYVLVGEVQKVSNLILSMNLVLRAVPSGEVVRARAVDIRSNTDDSWLRGM RYIFKTHMFVEG" gene complement(348759..349943) /locus_tag="RTM1035_01685" CDS complement(348759..349943) /locus_tag="RTM1035_01685" /EC_number="2.6.1.1" /note="COG1448 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase" /protein_id="jcventer:1101493006646_RTM1035_01685" /db_xref="CDD:31637" /translation="MFDALKEKPADKILALGQAFREDPRETKIDLGVGVYKTPEGVTP VMRAVKAAEKQLWEAETTKAYTALAGDPAFADAMIALVLGDAVARDQVSAIATPGGTG AVRQAFDLVKMANPGGRVFVSDPTWPNHLSILAHMGIEVVMYRYFDPETVGVDFTGMM ADLDGLRAGDVVLLHGCCHNPTGANLNMTEWRAVVDLLNARGALPMIDIAYQGFGDGL EADAAAVRFVAENCPEMLIAASCSKNFGIYRERTGILMAVAQDKSLQKVTQGNLAYLN RQNYSFPPDHGARLVTMVLTDPALRADWQSELEDVRLGMLKLRETLAAELQRLSGSDR FGFVAQHRGMFSRLGATPEQVERLRAEHAIYMIGDSRINIAGLNARTVPILAKAMIEV GV" gene complement(349943..350794) /locus_tag="RTM1035_01690" CDS complement(349943..350794) /locus_tag="RTM1035_01690" /note="COG2897 Rhodanese-related sulfurtransferase" /codon_start=1 /transl_table=11 /product="3-mercaptopyruvate sulfurtransferase" /protein_id="jcventer:1101493006646_RTM1035_01690" /db_xref="CDD:32722" /translation="MDDPKTLVSTDWLAAHLKDPDLRILDGTMFMAAEGRSGRAEYEA AHIPGARFFDIDDISDARSELPHMAPPVEKFMSKLRAMGVGDGHQVVVYDAKGLFSAA RVWWLFRLMGQDNIAVLDGGFPKWQAEGRAIEDMPPIIRDRHMTVRRQNQMVKDVTQV AAAAKLGDYEILDARSAARFRGEAPEPRAGLRAGHIPGSKNVPYTDLLNADMTMKDAD ALRAVFAATGMDMTKPVITSCGSGVTAAIINLALERIGKTDHALYDGSWTEWGAFPTL PVATGEV" gene complement(350875..351135) /gene="smpB" /locus_tag="RTM1035_01695" CDS complement(350875..351135) /gene="smpB" /locus_tag="RTM1035_01695" /codon_start=1 /transl_table=11 /product="SsrA-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01695" /translation="MELLIALLAGATAAMIAAGLGLSPRLGWLLQAGMGAIGGAAGAY ILSHAPATGSDTAYLIRLVAVTATGGIVTLWALRAIARLLRR" gene complement(351152..351628) /locus_tag="RTM1035_01700" CDS complement(351152..351628) /locus_tag="RTM1035_01700" /note="COG0691 tmRNA-binding protein" /codon_start=1 /transl_table=11 /product="SsrA-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01700" /db_xref="CDD:31035" /translation="MAKAKENPNYKVIAENRRARYDYAIEDDLECGIILGGSEVKSLR VNSANIAESYAMVENGELWLVNSYIAPYEQAKTFGHDEKRRRKLLVSKKELSRLWSET QRKGMTLVPLVLYFNHRGMAKLKIGIAKGKKNHDKRETEAKRDWARQKQRLLKDHG" gene complement(351676..352332) /locus_tag="RTM1035_01705" CDS complement(351676..352332) /locus_tag="RTM1035_01705" /note="COG1802 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="regulatory protein GntR, HTH:GntR, C-terminal" /protein_id="jcventer:1101493006646_RTM1035_01705" /db_xref="CDD:31987" /translation="MEIRRADMIADTLEELVFTGDFSDGDRLDEIRLARQFNVSRTPI REALQRLVASGLAVQIPRRGVFIRQPGLVELMEMFETMAEIEGVCGRLAAHRISESAL ADLDTANARCTEAIAADDADSYYRENERFHHMIYRHAGNGFLEQEALRLHRRLKPFRR MQLRLRGRMAQSMAEHEAVVTALRAGEAERAATVLRGHVAIQGEKFHLLMASLRRAAE " gene 352470..353522 /locus_tag="RTM1035_01710" CDS 352470..353522 /locus_tag="RTM1035_01710" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01710" /db_xref="CDD:31825" /translation="MNKMTFTAAAAAGMMLLSSAAFATELRLSHQWSNNDVRHKVAQI VADEVAAAGVDLDIKIFGSESLFKAREQYTPLSRGQLDMTVLPLSYAGGQQPAYNLTL MPGLVKNHDHAARLSDSPFMEAVEAKMAEDDVMVLVHGYLAGGFASTGKCITKPEDVA GMQTRAAGKAFEQMLAGAGASIASMASSEIYNAMQTGVLDAVNTSSSSFVSFRIYEQV KCYTPAGDVALWFMYQPLLMNKSTFDGLSAEQQAALMAAAEKAEAFYLEEAKKEDAAS VQVFKDAGVEIASMTEEDFAAWRALAAERPIRNSLPAWPMGRRCLIWRSRSSDPLRLP RLICAAANFLLPPDMR" gene 353526..354074 /locus_tag="RTM1035_01715" CDS 353526..354074 /locus_tag="RTM1035_01715" /note="COG3090 TRAP-type C4-dicarboxylate transport system, small permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01715" /db_xref="CDD:32904" /translation="MAGHASGAIARTGQNPFLRAVAALSTLAGWISAAMIVASVFITC QMIWVRFVLNGTTVWQTEAVIYLMIAATLLGLSYVQRLRGHVNVDLIPLAVPRRARKG LAVVTLSLSIVIVAVMLWYGYEFWHVAWARGWTSDTVWGIDLWIPYLAIPVGLGLFLL QLVADLVALLLNIDAPFGLEDV" gene 354074..355390 /locus_tag="RTM1035_01720" CDS 354074..355390 /locus_tag="RTM1035_01720" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01720" /db_xref="CDD:31781" /translation="MDPLLLGLIVAIATIVVLFSGVSVALGLLIVSGGFLIVFDGMRS LELLPEIFFGKLNNFALLSIPMFIIMGASIASTRAGADLYEALERWLTRVPGGLVISN LGACALFSAMSGSSPATCAAIGKMGIPEMRKRGYPDAVAAGSIAAGGTLGILIPPSVT MIVYGIATETSIGRLFLAGVIPGLLLVGLFMAWSLYSTWRSGDMNLLTGRSYSWRERI EILPRVLPFLFIILGVLYAMYGGIATPSETAAVGALLCLVIAMVIYKLWSPVALWVVL RDSTRESVMILFIIGAAGVFSYMLSSLFITQSIAEWIGTLDVNRWVLMGAVNVFLLVA GFFLPPVAVILMAAPILLPIITTAGFDPIWFAVILTINMEIGLISPPVGLNLYVINSI APDIKLKTILVGSLPYVGCMVLAIVLLCLFPGLATWLPDLVMGTMR" gene 355387..356631 /locus_tag="RTM1035_01725" CDS 355387..356631 /locus_tag="RTM1035_01725" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01725" /db_xref="CDD:45193" /translation="MSVLADLLATVFERRYRGASEPDHKNRSIEDLCRDLLGSSGEVS GMALARLILDRYAGMADAEKLEFFRFLTEGMGVDPESVRNALDAFEAGPDRDSYRGFM DAAEPPRQELARRLNQVPGATAQLVAMRADLLRLARDNPALAVVDLDLKHLFSSWFNR GFLVLRPINWSSPADVLEKIIAYEAVHAIDSWDDLRRRLAPKDRRCFGFFHPAMPDEP LIFVEVALSRGIPGAIHDVLSEERAVIGAHEADTAVFYSISNCQSGLAGISFGNSLIK QVVADLSQELPGLKTFVTLSPIPGLTRWLSETRAVLPEEAETRRAVTAHYLLKAKRPD GGPYDPVARFHLGNGASVHAVHAGADLSPNGQKQSGGVMVNYLYDRAQISQNHERFAG AGVIAASAEVTALAAIAAKKTE" gene 356644..358161 /locus_tag="RTM1035_01730" CDS 356644..358161 /locus_tag="RTM1035_01730" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="malonyl-CoA synthase" /protein_id="jcventer:1101493006646_RTM1035_01730" /db_xref="CDD:30666" /translation="MANPLYDNLFGRHAGQTAPFLHLANGAVVSYDAFLRMTARYAHA LRGAGLVPGDRLAAQVEKSPEALAVYAACVQAGIVFLPLNTGYTGDELGYFVGDSGAK VLLCDGAKAGALQGVADRAGATLMTLNADGTGTLPEAAEGLNESFETAPREPDDLAAF LYTSGTTGRSKGAMLTQRNLLSNAEVLVDYWRFSSDDVLLHALPIFHTHGLFVATNII LLAGGSMIFLPKFDQDQVIAQLPRATSMMGVPTFYTRLLDDPRFTSALVAHMRLFTSG SAPLLAETHVAFEERTGHRILERYGMTETNMNTSNPYEGARRAGTVGFPLPGVELKIT DPQTGAEVPQGEIGIIEVRGPNVFAGYWNMPEKTAEELRTDGFFITGDLGMIDDQGYV QIVGRNKDLIISGGYNIYPKEIELLLDDQPGVLESAVVGVPHPDFGETVVGFLVPQKG AVVDIDAIAGAAAKSLARFKHPRKLIVLEELPRNTMGKVQKNILRAEYAGLFASA" gene 358415..359596 /locus_tag="RTM1035_01735" CDS 358415..359596 /locus_tag="RTM1035_01735" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01735" /db_xref="CDD:31027" /translation="MFRLALLVFAGLMALSPPVQAQEVRAVVLRVDYPALLPVSRLDL RPEDLGFAGGQLATEDNQTTGRFMGQTYVTDVVAATPETALAEFERLQGEGLRFFAVQ ARAGELLAMSEAAAPDTLIFNTLAPDTALRSAECRGNILHVAPSRQMQSDAVAQFLIW KKWPRWALIHGSHPEDIALAEAYRASAAKFGTKIVDEREFTDTGGARRTDTGHVQVQR QLPVFTQDLKEHDVIIAADETDVFATYLPFHTWRPSPIVGSAGLRPLAWHPALEAWGG TQFQHRFEELTGRYMRPEDYTAWLALRVLGEAVTRTQSADPAAIRAYALSENFELAAF KGQKLTFRAWNGQLRQPILLADGRITLSVSPQDGFLHQRSLLDTLGLDQPESACTAFA Q" gene 359602..360573 /locus_tag="RTM1035_01740" CDS 359602..360573 /locus_tag="RTM1035_01740" /note="COG3391 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01740" /db_xref="CDD:33198" /translation="MSMHHLALATAFAALMTSPALAGKVFVSNERGNTITVVDSETWE VITEFAAGNRPRGITASPDGKHLYVCASDDNVVRVFDTETYQELHTLPSGPDPELFVL HPSGNPLYIANEDDNLVTVTDVNTHTILAEVPVGVEPEGMGISPDGKYVVNTSETTNM AHFIDTTTFEIVQNTLVDQRPRFAQYTADGEYLFVSAEIGGTVSVINPEGGGIEHKIT FEVPGIAPELLQPVGVRVTSDGKKIFVALGPSNRVALVNGETFEVEKYLLVGQRVWQL AFDAEEKYLYTTNGNSNDISIIDVAAEEVVKSVQVGQQPWGVVVVSD" gene 360598..361038 /locus_tag="RTM1035_01745" CDS 360598..361038 /locus_tag="RTM1035_01745" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01745" /translation="MKHMLTAAALALLAMPANAAPLCDDLGFAGLLAKCNRGDEIKVT LASGQPLGEGPITLQSGAYYEMEITADGSAELALTGPEFFRAIWMDEIVINEIEIRPM AIDSFEFDDAGTAEFSFIAIKPGRYHMLIPGTSGDSQRLEFIIQ" gene 361087..361806 /locus_tag="RTM1035_01750" CDS 361087..361806 /locus_tag="RTM1035_01750" /note="COG1131 ABC-type multidrug transport system, ATPase component" /codon_start=1 /transl_table=11 /product="putative ABC transporter ATP-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01750" /db_xref="CDD:31326" /translation="MTGLRIDGLGFSYGAKRALENVSFEVEQGAFCALLGPNGAGKST LFALLTRLFTTREGRISVAGHDIASNPRQALARIGVVFQQQTLDLDLSVRRNLRYFAA LHGLAGRAAEMRIEAALERMAMRERADELARDLNGGHRRRTEIARALVHQPAVLLLDE PTVGLDAEARRAITAHVHDLCAGDGLTALWATHLTDEVWPEDRLVILHRGCVLADGIT REIAGQDGLTERFLSLTGAPA" gene 361803..362594 /locus_tag="RTM1035_01755" CDS 361803..362594 /locus_tag="RTM1035_01755" /note="COG0842 ABC-type multidrug transport system, permease component" /codon_start=1 /transl_table=11 /product="efflux ABC transporter, permease protein" /protein_id="jcventer:1101493006646_RTM1035_01755" /db_xref="CDD:31184" /translation="MRPLLIALAAIVTREALRFARQRSRFVSALVRPLVWLVVFAAGF RAALGLSIIPPYQTYITYETYIVPGLCGMILLFNGMQSSLSLVYDREMGSMRLLLTSP LPRWWLLFAKILAGTAVSVLQCYAFLGIAAAMGIKMPVMGYFYVLPALILGGVMLGAL GVALSSFISQMENFAGVMNFVIFPTFFMSTALYPLWRMAESSMLLRDICAVNPFSHAV ELIRFALYGQFNGMALLWTALASLVFLALALWGYDPGRGLMQRRG" gene 362652..363374 /locus_tag="RTM1035_01760" CDS 362652..363374 /locus_tag="RTM1035_01760" /note="COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, LuxR family protein" /protein_id="jcventer:1101493006646_RTM1035_01760" /db_xref="CDD:32379" /translation="MTPKTAHIPGTRPAPAGPGRFTTALIVDDHPLFCDALSMTLKSV AGIGRIDTAESLDQALAMVAENGPPDIIVLDLNLPDVSGLDGLARLRAVAGETPIVVV SSMSESRMVCSVIHAGAAGFVPKHSQRPVFRAAFEAIAAGEIFLPEGVVLTKTQEQPV NDRDEAVERLAHLTRQQARILQLICEGRLNKQIAYELSIAETTVKTHVTAIMRKLGVQ TRTQAVLIAQMASFSNVLREAE" gene 363420..364586 /locus_tag="RTM1035_01765" CDS 363420..364586 /locus_tag="RTM1035_01765" /note="COG3287 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01765" /db_xref="CDD:33097" /translation="MDSSLSELMLCDQAIVARAEVPHDACDPIGTLRRAMGDVRLALV LFFVTPKADFEALMVEAARVFVDSRCVGCTTAGEIGMSGYAEGSIVAVGFAADHFHAV LQVVTPLSELDSTACVSQTVRARAWLATQAGQSLPNEFAFLAVDGLSLKEDELVAAIA AGLGPMPLFGGSAADGERFAQTLISCDGVTLRNAAVVCLMRTDCPVRVFRLDHFQPTD RRMVVTDADPARRIVHQINAEVAAQEYARILGCRIDELTPSTFAENPVVVRIGGQHHV RAIQRAEANGDLQFFSAIDEGLVLTLAQSQDMAAHLEHELAGLGAETPPLAVLACDCI LRRTEVQQRQIGPEISRILAAHRVVGFSTYGEQINGLHVNQTMTGVAIYPPIGR" gene 364590..366794 /locus_tag="RTM1035_01770" CDS 364590..366794 /locus_tag="RTM1035_01770" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="signal transduction histidine kinase" /protein_id="jcventer:1101493006646_RTM1035_01770" /db_xref="CDD:30987" /translation="MSAALIDNSDPLDRQNGKLLKIIEVLMRRVEQVTDDGGAAYAHF ERAVILEDQISERTRDLEHALDLLNDSNAQLAQAIREAERARSDLANAIETIQEGFAL FDSDGRLVLHNSRFGMYMPDLVAELRPGLEFADYVRHASQSRFLELPDMQSRGDWAAR RMQLHQEKHVMFNLNLTGDCWVQVSEHRTRDGQTVILQTDITDIIRLERRERGKLLDD QAQLIRATLEHIDQGVCIFDRSGQLRGWNQNAGSMLSIPISRFRVGIEFDVILRRIGS DFEIEGGLSAHDIAVWVGAQDRRAPLRFYMRSGTHKTLDVFARQMPDRGFVISFSDVT AERAAARALAHANERLEQRVRDRTLELEDALAKAERANASKSRFVAAASHDLRQPLSA ARLYLASLQEELASADHRVLMDKAQRALTSVEDIIDALLDISRLESGHVEVDVTHVPL RRITDQLIDEFAPIAAIKGLDLRYVPCGAMVESDASYLRRVLQNLIANAIRYTPSGKV LVGARRQGRNLRLEVRDTGPGIAPADQDRIFQEFHRLDAHVSAAEGMGLGLAIVDRAC ALLGHPLELRSDLGCGACFSVTVPLVSVARSGPEIRGVGGARARASLEGRIVLLIEND PDLRHALTLLLRGWGADVVEAGNLLEALTQLADLGLSPDAMLVDYELDEGVRGPEVIA RIMARHGVIPARIITGHLVAEMHAHCRAAGLEVLPKPIDPAELEAFLKAAVG" gene complement(366808..367962) /locus_tag="RTM1035_01775" CDS complement(366808..367962) /locus_tag="RTM1035_01775" /note="COG3454 Metal-dependent hydrolase involved in phosphonate metabolism" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnM, putative" /protein_id="jcventer:1101493006646_RTM1035_01775" /db_xref="CDD:30049" /translation="MTMTTLEITLRGAQVLTAEGLTACDLSLSNGRIADTPSGRAVDL DGYMILPGIVDIHGDGFERHLAPRRGAMKDLAQGMIATEAELAANGITTAVLAQFYSW EGGMRGPEFADQVFAALTAVREHVETDLHAQLRFEMSLLDDYAAVEDMVARHGIGYVV FNDHLPHKALAAGKKPQGLTGQALRIGRNPEKHLEYIQGLHARLPEVGPALDRLSTGL AARGVRLGSHDDATAEGRRQARARGMTIAEFPETLEAAEEARAGGDAVIMGAPNLVRG GSHKGNVSAVDLVAMGLVDALASDYHYPSLMRAAFLLADGGVCDLATAWGLISSGPAR LLGLSDRGTLRPGQRADLVILAADTRRVVATMAEGRISYMAGAVARRFIG" gene complement(367959..368678) /locus_tag="RTM1035_01780" CDS complement(367959..368678) /locus_tag="RTM1035_01780" /note="COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold" /codon_start=1 /transl_table=11 /product="lipase, putative" /protein_id="jcventer:1101493006646_RTM1035_01780" /db_xref="CDD:31273" /translation="MTILAGLILALWTTAARADCVVLLHGLARSDASFVILQEVLEAR GYDVFSPDYPSTEEEIERLARETLPFAVRVCGATRVHFVTHSMGGILLRLWLKDNRPD QMGRVVMLAPPNHGSELVDELGGLELFRWLNGPAGLQLETGPGGVPENLPPVDFELGV IAGTRSLNPYFSSLIDGPDDGKVSVASTRVEGMADHITLPVTHTFLMNNPLVIAQVEE FLAQGQFNHGLTLGDVLLGWR" gene complement(368727..370442) /locus_tag="RTM1035_01785" CDS complement(368727..370442) /locus_tag="RTM1035_01785" /EC_number="2.2.1.6" /note="COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]" /codon_start=1 /transl_table=11 /product="acetolactate synthase II large subunit" /protein_id="jcventer:1101493006646_RTM1035_01785" /db_xref="CDD:30378" /translation="MRATNTKEQDMGTNTRNGGQLLVDCLLALGARHSFGVPGESYLA VLDALHDTAGRLDFTLCRQEGGAAFMAAAYGKLTGRPGICWVTRGPGATNAAIGVHTA MQDSAPMILFVGQVGTDMKGREAFQELDYRAVFGTMVKWAVEIDQVGRIPEIVARAWK TAVTGRPGPVVVALPEDMLTDMTEVPPLSGPGTYPEPEPGAQAVTKARAMLAGAKRPL LLYGGCNWTDAGRAALQEFAAASDIPVVSVFRYQDQFDNHAPVFCGEAGVGMVPNVRR LLAEADVILAVNNRFGENSTDGYTVFDLPEPQQRLIHVHGSDLELGKVYQPELGIQAG PNAFAHALNAGGPVQGDWAAWRAEARAGYEAGFDLPDLPSPVDMGKVTAYLRKVLPED AIITNGAGNFAIWSGRFLKYGAAMRLLAPQSGAMGYGIPAAIAAKVVHPERRVLCFAG DGDFQMTCQELATAAQAGAQPVILILNNGIYGTIRAHQERNYPERVSGTDMVNPDFSA LARAYGFHAERVERTEDFADAFTRACASPTGAVLDLVISTEALTPRMTLSQMRAAGLA KRDGA" gene 370536..370979 /locus_tag="RTM1035_01790" CDS 370536..370979 /locus_tag="RTM1035_01790" /note="COG1051 ADP-ribose pyrophosphatase" /codon_start=1 /transl_table=11 /product="NUDIX hydrolase, MutT" /protein_id="jcventer:1101493006646_RTM1035_01790" /db_xref="CDD:31251" /translation="MPSPRLAARAVIVDQGRLLLVNAYADAASTLWCAPGGGVELGTS LPENLMREVHEETGLTIRVGTPCLINEFHAPATGFHQVEVFFRCTVTAGALSEDWRDP EQIVTRRRWVTEAEMGELRFKPDSLARVAFQRGMGYDPLEEIVGP" gene complement(370946..371824) /locus_tag="RTM1035_01795" CDS complement(370946..371824) /locus_tag="RTM1035_01795" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01795" /db_xref="CDD:34611" /translation="MRLFLLTALTMIAFAANSVLTRMAIAGGDIDAVSFGVIRLISGA VMLGLLCLVLRGGLRLLGPGRAIGVMALLIYFYGFSIAYRGLDAGLGALILFGVVQIT MFAGGLFAREAMPVRRWTGAGLAFAGLAWLLWPGGGPQVSVIHGLLMAGAGIGWGVYS LTGRKSGDALMATAANFIWAAPVGLLVGWLVPKGAEGIVIGPQGVLLAVLSGAVTSGL GYALWYSLLPRLAASVAAVAQLTVPVIAMAGGMLFLGEALSAEFVLASALVLGGVAVS VIPMRPQGPTISSKGS" gene complement(371981..372664) /locus_tag="RTM1035_01800" CDS complement(371981..372664) /locus_tag="RTM1035_01800" /note="COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)" /codon_start=1 /transl_table=11 /product="aquaporin z, Major Intrinsic Protein (MIP) Family" /protein_id="jcventer:1101493006646_RTM1035_01800" /db_xref="CDD:29423" /translation="MQKQLAEFIGTFTLVLFGCGAAVLAGGDIGLAGISFAFGFALIG MAYGIGPVSGCHINPAVSLGAVAAGRMSLTTAAGYIVAQILGAVAGAFVLMTIASGKA DYSLAQNGLGQNGWGPGYLGEYTMTAAFLFEVVASFLFMVVILGATGKGAPAHLAGLA IGIALVVIHLVGINVTGVSVNPARSIGPAVFVGGTALAQLWLFIVAPVIGTVAAGLLF RSGQLDAQS" gene complement(372834..374474) /gene="groEL" /locus_tag="RTM1035_01805" CDS complement(372834..374474) /gene="groEL" /locus_tag="RTM1035_01805" /note="COG0459 Chaperonin GroEL (HSP60 family)" /codon_start=1 /transl_table=11 /product="chaperonin GroEL" /protein_id="jcventer:1101493006646_RTM1035_01805" /db_xref="CDD:48161" /translation="MAAKDVRFNTDARNRMLKGVNILADAVKVTLGPKGRNVVLDKSF GAPRITKDGVSVAKEIELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKE GMKAVAAGMNPMDLKRGIDLATSKVVEAIKAASRPVNDSAEVAQVGTISANGEAEIGR QIAEAMQKVGNEGVITVEENKGLETETDVVEGMQFDRGYLSPYFVTNADKMVADLEDC LILLHEKKLSSLQPMVPLLEQVIQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAV KAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVGMDMLGRAKKVSITKDATTIVD GAGEKAEIEARVSQIRQQIEDTTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKER KDRVDDALNATRAAVQEGIVVGGGVALVQAAKKLAGLEGVNSDQNAGIAIVRRALEAP LRQIAENAGVDGSVVAGKIRESSDAKFGYNAQTDEYGDMFKFGVIDPAKVVRTALEDA SSIAGLLITTEAMVADKPQKENAGGGGMPDMGGMGGMM" gene complement(374529..374816) /locus_tag="RTM1035_01810" CDS complement(374529..374816) /locus_tag="RTM1035_01810" /note="COG0234 Co-chaperonin GroES (HSP10)" /codon_start=1 /transl_table=11 /product="chaperonin Cpn10" /protein_id="jcventer:1101493006646_RTM1035_01810" /db_xref="CDD:40266" /translation="MAFKPLHDRVLVRRVESEAKTAGGLIIPDSAKEKPSQGQVVSCG DGARKDNGELIAMAVKAGDTILFGKWSGTEVTVDGEELLIMKESDILGVIS" gene 375074..375994 /locus_tag="RTM1035_01815" CDS 375074..375994 /locus_tag="RTM1035_01815" /EC_number="3.6.1.1" /note="COG1227 Inorganic pyrophosphatase/exopolyphosphatase" /codon_start=1 /transl_table=11 /product="putative manganese-dependent inorganic pyrophosphatase" /protein_id="jcventer:1101493006646_RTM1035_01815" /db_xref="CDD:31420" /translation="MTTLVFGHKSPDTDSTGSPILWAWYLNEVKGAQAEAVLLGEPNT EAAFLLRKWDLPKPRIIADVDAGQPCVIVDTNNPAELPANINNADIQAIIDHHKLVGG LETKGPIDITVRPLACTATIMLDLMGDDAAKMPSWAKGTALTCILSDTLEFRSPTTTP HDRAVAEKLAADLGISIPDYAAEMFAAKSDVSAFSDAELLRMDSKEYEVGGKSFRVSV LETTSPAIVLDRKASLMQSMTTVAAEDGVDQVLLFVVDILNEEATLLVPNDLVKTVAE KSFGATVSGDAVVLPGIMSRKKQIIPNLAL" gene 376147..378174 /locus_tag="RTM1035_01820" CDS 376147..378174 /locus_tag="RTM1035_01820" /note="COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family" /codon_start=1 /transl_table=11 /product="2,4-dienoyl-CoA reductase" /protein_id="jcventer:1101493006646_RTM1035_01820" /db_xref="CDD:28795" /translation="MSEYPHLLSPLDLGHVTLKNRVLMGSMHTGLEETRDWNRVAEFY AARARGGVALMVTGGMAPNREGGVFPGAAGLFTPEDITNHRIVTDRVHEAGGLIAMQI LHAGRYAYGKECVSASAIKSPISPFTPKALDEEGIEKQIADIVTAAQRAREAGYDGVE IMGSEGYFLNQFLVTHTNKREDRWGGAYENRMRLPIEVVRRARAAVGDDFIIIYRLSM IDLVPGGSTHDEVVQLAQEIERAGASILNTGIGWHEARIPTIATSVPRAGFAWVTKKL MGKVSIPVITSNRINTPEVGEAVLASGAADMVSMARPFLADAEFVNKAAAGRSATIAP CIACNQACLDHTFSGKLTSCLVNPRACHETELVIAPAEMPKRIAVVGAGPAGLSAAIT AAGRGHQVTLFDRAAELGGQLNMAKVIPGKEEFRGLVDWFGTMVAESGIDLRLGQEVT ADHLDGFDAVIIATGVIPRDPGIPGQDGPNVVTYVDVLRGGAEVGHRVAVVGAGGIGF DVSEYLVHEGISPTEDITLWRTEWGVGDPAEVRGGLAPQGPQPEPAARKVTLLQRKAE APGKRLGKTTGWIHRAALKMKGVEMIGGVNYEKIDAEGLHVSFGEARERPTLIAADTV VLCSGQLSERSLADTLAARGIEAHVIGGADLAAELDAKRAIDQGTRLAATL" gene complement(378181..378624) /locus_tag="RTM1035_01825" CDS complement(378181..378624) /locus_tag="RTM1035_01825" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01825" /translation="MTRIIAITAATFLSLSFPLFAGDTPAPEGAEVYFVNLEDGATVT APVKVIFGLKGMGVAPAGTEKEATGHHHILVNRPPLGEGPDGEQELTVGLPADENHRH FGGGQTEATLDLAPGTHTLQLVMGDLNHVPHAPPVVSEVITITVE" gene 378818..379723 /locus_tag="RTM1035_01830" CDS 378818..379723 /locus_tag="RTM1035_01830" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006646_RTM1035_01830" /db_xref="CDD:30928" /translation="MDRLTEMEAFATVVDQGGFTDAARKMGISKSAVSKHVSSLEARL GARLLNRTTRRVSPTEIGLAYYDRALRVLNDAGEADALVSSMQSDPSGLLRISVATDF GVNHLSPVLGQFLDEFPDITVNMVLNNRYVELISEGFDMAVRIGELEDSTLRARKLTE TTKRMIASPGYFQKHGRPQKIDDLNEHKLLHYSSQAGGAVWKLTAPSGEKRQVRTAGG LSVNDGQSLLNAAISGLGIAYLPSFLYSRAMADGLVEDAMPELPLELQGIYAVYPPGR FTQPKVRAFIDFLVHQFADKGPVDW" gene 379906..380445 /locus_tag="RTM1035_01835" CDS 379906..380445 /locus_tag="RTM1035_01835" /note="COG0431 Predicted flavoprotein" /codon_start=1 /transl_table=11 /product="NADPH-dependent FMN reductase" /protein_id="jcventer:1101493006646_RTM1035_01835" /db_xref="CDD:30780" /translation="MANPKLLLISGSLRKGSYNRMLLAEAAEAFGPAEISDGSLDLPL YDGDLEEAEGVPDAVKHLAQQIKDADAVIIGAPEYNKGITGVLKNGLDWISRVPGAAF KNKPVVVVSASAGRTGGETAQFMTLSCLTQLQARLVPGTAVLIAGAMNAFDDAGKLKD ETSRKLLAERMAALRAEVV" gene complement(380497..382140) /locus_tag="RTM1035_01840" CDS complement(380497..382140) /locus_tag="RTM1035_01840" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01840" /db_xref="CDD:31090" /translation="MTKDTSHDSVRPVVAKMAEDTRAGKMSRREFVALASTFGASATA AYGLLGLAVPTAAYAEDAKKGGVLRVASRVMDITDPRKYSWTEPGNVARQFCEPLVRW ASDFSFQPMLLEGWEVSDDAMTYTLKVRQNAVWNNGDAFNADDVIHNLNRWCDKAAEG NSMASRMATLIDPDTGRALDGAIERVDDFTIRLNLPRPDITIIAGMSDYPALCVHPSF GDDGDLAKAPIGTGPFELVSMDIGVAAEVKRREDGKWWGGDVYLDGIRFVDFGEDNAS IVAAFDGDEIDINDESTADFIESYDALGLIKQSKTTANTIVARMRADTAPYDSKELRN AIQLACDNAVLLAISINGEGIPAENHHVAPFHPEYAELPAIAADPAKAIEMARAAGHG DTEIEIISIDGDWRTTTTDAIGDQLRQAGFNVKRTVIPGASFWNDWTKYPFSTTNWGP RPLGVQVLALAYKSGEAWNESGHANPEFDALLDEALGVFDADKRREYSAKLQTMLQDS GAVIQPFWRNQALHHTDKVKGVQAHQFREMHYEQVWLDA" gene 382403..383506 /locus_tag="RTM1035_01845" CDS 382403..383506 /locus_tag="RTM1035_01845" /EC_number="4.2.3.5" /note="COG0082 Chorismate synthase" /codon_start=1 /transl_table=11 /product="chorismate synthase" /protein_id="jcventer:1101493006646_RTM1035_01845" /db_xref="CDD:41320" /translation="MSLNTFGHLFRFTTWGESHGPALGATVDGCPPGVALDETMLQHW LDKRRPGQNKNMTQRNEPDAVRILSGVYEGQSTGTPIQLMIENTDQRSRDYGEIAKTF RPGHADITYYLKYGLRDPRGGGRSSARETAARVAAGGVARAALEALVPGIEIKGYMVA MGEMELDRAQFDWDAIDGNDFWLPDAAAAPAWEDYLQALRKKHDSVGAVIEVVARGVP AGLGAPIYGKLDTDLAAAMMSINAVKGVEIGEGMAAARLTGSANADEIFMGENGPEFA SNHAGGILGGISTGQEIVVRFAVKPTSSILTPRQSITVDGNPIEVVTKGRHDPCVGIR AVPVGEAMMACVILDHLLLHRGQVGDGPRGHIG" gene complement(384577..385446) /locus_tag="RTM1035_01850" CDS complement(384577..385446) /locus_tag="RTM1035_01850" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01850" /db_xref="CDD:34611" /translation="MDIRAILMGLGFALMWSSAFTSARIIVSAAPPLTALGLRFLISG LLGITIALILGQSWRLTRAQWRATIIFGICQNALYLGLNFVAMQTIEASLAAIIASAM PLIVGLFSWIFLKERLGKVGIMGLFAGLGGVVIIMGARLQGGMDLYGVSLCLIAVFAL AFATLAVRGAASGGNFLMVVGLQMMVGAVLTGSIGLATEPLVIDWSTRLVLAFLYTTL VPGLAATLVWFLLVERIGATRAATFHFLNPFFGVAIASVLLNEALRLGDLIGVLVIMG GILAVQLSRQGRV" gene complement(385530..386186) /locus_tag="RTM1035_01855" CDS complement(385530..386186) /locus_tag="RTM1035_01855" /note="COG3719 Ribonuclease I" /codon_start=1 /transl_table=11 /product="ribonuclease T2" /protein_id="jcventer:1101493006646_RTM1035_01855" /db_xref="CDD:29474" /translation="MKDQRMRAQVALLLCLLLLPLPATAQSHRAGEFDYYVLSLSWSP TWCALEGDARSAEQCDDAANTGWILHGLWPQYHRGWPEHCQSVHAPPTRAMTRAMADV MGSTGLAWYQWKKHGSCSGLSAADYYALSRAAFDQFTRPEVFRKLTKPVKLPAKVVEE AFLKANPGLEPDMLTITCRAGRIQEARLCLSRDLAPVPCGVDVERDCALRDALFDPIR " gene 386303..387076 /locus_tag="RTM1035_01860" CDS 386303..387076 /locus_tag="RTM1035_01860" /note="COG3820 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01860" /translation="MSKPIMAKATAVWLVDNTTISFKQIADFCGMHELEVQGIADGDV AAGVKGFDPIANNQLTQDEIERAQASPLHKLKLKFNAAAQGEETRRGPRYTPLSKRQD RPASILWLVKFHPELADSQIARLVGTTKPTIQAIRERTHWNIGSIQPIDPVALGLCKQ SELDAAVQKAAAKKAKDGAALTDDERRKLLSTEQSLEADLEPRVPTAMEGLENFTLGQ DYHPEVREKKYDADSFFNLPASDDEDDEDDDQDAGRRRR" gene complement(387144..387500) /locus_tag="RTM1035_01865" CDS complement(387144..387500) /locus_tag="RTM1035_01865" /note="COG3326 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01865" /db_xref="CDD:46845" /translation="MSPLALTLLYLLALNALTLGLFWWDKRCAIERRWRVPESTLLTL CLIGGSLGAKTGQGIFRHKTRKEPFRTSLNAIAVLHIGFLGALVLPEFRAAVMVFLTH ATSYVLGLAATWIPAA" gene complement(387552..388145) /locus_tag="RTM1035_01870" CDS complement(387552..388145) /locus_tag="RTM1035_01870" /note="COG0353 Recombinational DNA repair protein (RecF pathway)" /codon_start=1 /transl_table=11 /product="recombination protein RecR" /protein_id="jcventer:1101493006646_RTM1035_01870" /db_xref="CDD:30702" /translation="MSSTRDIDALIDMMARLPGLGPRSARRAVLHLIRKRALLLSPLA KLMQTVADTARECATCGNIGTTEICDICTNAKRANGQICVVEDVADLWAMERGQAFKG RYHVLGGTLSALDQVGPEVLRIPALLARVDSEAITEVILALNATVEGQTTAHYIADQL DGRVTLTSLAQGVPIGGELDYLDDGTISAALSARKRL" gene complement(388212..388664) /locus_tag="RTM1035_01875" CDS complement(388212..388664) /locus_tag="RTM1035_01875" /note="COG0718 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01875" /db_xref="CDD:42545" /translation="MNTAPLACRLKTADMLKGGNVIQWPALRAKTTGDYSMFKGLGQM GDMAKMMKAAQEMQKKMAALQEEMHTIMVTGESGAGLVKATCSAKGELKALDIDPSIF NSDDKEVVEDLILAAIKDAQAKASARAQEEMGKITEGMGLPKDMKLPF" gene complement(388661..390427) /locus_tag="RTM1035_01880" CDS complement(388661..390427) /locus_tag="RTM1035_01880" /EC_number="2.7.7.7" /note="COG2812 DNA polymerase III, gamma/tau subunits" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunits gamma and tau" /protein_id="jcventer:1101493006646_RTM1035_01880" /db_xref="CDD:32641" /translation="MSDTPTPGYQVLARKYRPETFADLVGQDAMVRTLKNAFQADRIA QAFIMTGIRGTGKTTTARIIAKGMNCIGPDGQGGPTTEPCGQCEHCRAIMEGRHVDVM EMDAASRTGVGDIREIIESVNYRAASARYKIYIIDEVHMLSVNAFNALLKTLEEPPAH VKFIFATTEIRKVPVTVLSRCQRFDLRRIEPEVMIALLRRIADREGAQITDDALALIT RAAEGSARDATSLLDQAISHGAGETTADQVRAMLGLADRGRVLDLFDMILRGDAAGAL SELSAQYAEGADPLAVLRDLAEITHWISVVKITPDAANDPTIGPDERARGLDMATALP MRVLTRMWQMLLKALEEVAQSPNAMMAAEMAVIRLTHVADLPTPEDLVRRLQDAPPNG PGGGGGPRMQANPPQSTHAQAHTHAPTHSGPSGPVSQGAVSPMLATDPEEVLSRYPSF EHVLELIRANRDVKLLLEVEGHIRLANYRPGRIEFTPTPDAPGDLAQRLGSALQRWTG NRWAVTLVNSATAPTIVEARNAAKDAAESDARQHPLVQAVFAAFPRAKIARVKTEKDI TSHAETEALPEVDEEWDPFEED" gene 390562..391050 /locus_tag="RTM1035_01885" CDS 390562..391050 /locus_tag="RTM1035_01885" /note="COG2453 Predicted protein-tyrosine phosphatase" /codon_start=1 /transl_table=11 /product="dual specificity protein phosphatase" /protein_id="jcventer:1101493006646_RTM1035_01885" /db_xref="CDD:32569" /translation="MDDFIIYALRVGGGTLALAPLPGAGGNYAADLAHIRDWKPALVV SLTMPAEMLSAGAETFGNDVQEAGSRWVAFPIPDYGVPDTSQIEAWTKASQDIARALA GGGRVLVHCRGGCGRSGMVALRLMIAQGEDPDAALERLRHIRPCAVETEAQLRWARRA GG" gene 391089..391544 /locus_tag="RTM1035_01890" CDS 391089..391544 /locus_tag="RTM1035_01890" /note="COG0239 Integral membrane protein possibly involved in chromosome condensation" /codon_start=1 /transl_table=11 /product="Camphor resistance CrcB protein" /protein_id="jcventer:1101493006646_RTM1035_01890" /db_xref="CDD:30588" /translation="MQVWRAERQTRVPRLTIDRARATDAGMMSAFLQVAVGGAIGSCL RYGVVLLAQRLAAPGFPVGVLGVNVIGSFLMGLAVVILAQRGAGQISPLVMTGLLGGF TTFSAFSLEAFMLWERGQAMAALGYVGLSVGLSIGALILGVWLARGFFA" gene 391541..392584 /locus_tag="RTM1035_01895" CDS 391541..392584 /locus_tag="RTM1035_01895" /note="COG0564 Pseudouridylate synthases, 23S RNA-specific" /codon_start=1 /transl_table=11 /product="Pseudouridine synthase, RluD" /protein_id="jcventer:1101493006646_RTM1035_01895" /db_xref="CDD:30910" /translation="MSGVQTRIVGPDDGDQRLDRWVRRLFPHVGQVQIEKMCRKGELR VDGGRVKPATRLEVGQSVRIPPLPDTDERPTGALARISPADAKMIQSCVIYRDDHIIA LNKPPGLPVQGGSKQLRHVDGLAEALRFGAEDKPRLVHRLDKDTSGVLLLARTREAAK GLTAAFRHRNTRKIYWAAVAGVPTPRMGTIRFGLVKAPGHGAKGEGEKMLCLHPRDID ATPGAKPATTDYAVIEAAGARTAWMALIPVTGRTHQLRAHMAEIGHPIVGDGKYGGSG QENLGDGWGAQLGGDVSRKLHLHARSLKIEHPVSRAILHITAPLPEHMARTWDLFQWV PSEAPEDPLEDMA" gene 392581..393255 /locus_tag="RTM1035_01900" CDS 392581..393255 /locus_tag="RTM1035_01900" /note="COG0546 Predicted phosphatases" /codon_start=1 /transl_table=11 /product="HAD-superfamily hydrolase, subfamily IA, variant 1" /protein_id="jcventer:1101493006646_RTM1035_01900" /db_xref="CDD:30892" /translation="MSRPLRLVIFDVDGTLVDSQGDILAAMRSAFDRAGEPAPVREVI LGIVGLSLDVAVARLAPQLPGDVHARIVAWYKEAYMGLRAETGVQASSPLYPHALETL KALHAVPETLLGVATGKSARGLDKLLEGHDLRSYFVTRQVADHHPSKPHPSMLRAALA ETGVAPENAVMVGDTSFDMDMAQAAGIAGIGVSWGYHRPEALGAAREIVQDFRALPEA LARIWG" gene 393259..393981 /locus_tag="RTM1035_01905" CDS 393259..393981 /locus_tag="RTM1035_01905" /note="COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01905" /db_xref="CDD:34949" /translation="MSEWKAKRFWTEAGVVEEGDGFGVRLDGRSVRTPAKAVLSVPTR ALAEAIAAEWDAQEGKIDPGTMPFTRSANAAIDKVAHQKSEVAEMLAAYGDSDLICYR AVSPSELVEKQAAAWNPLLDWTESVLSAKLLAVEGVVHVPQDVQAMARLRAHVDALDI WALTAFHDLVSLSGSLVIGFAALDGFYPVKTLWDLSRVDETWQAEQWGSDEEAEEMAA RKQSDFIHAKRFYDLSRKDQSV" gene 394186..395205 /locus_tag="RTM1035_01910" CDS 394186..395205 /locus_tag="RTM1035_01910" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01910" /db_xref="CDD:47410" /translation="MKKTVFLGALTVAGLAAGASAAATLDDVKARGKLNCGVTTGLVG FAAPDANGVWEGFDVAICRAVAAAVLGDGNAVEFVPTTGKTRFTALASGEIDLLARNT TWTFSRDTDLKFDFVGVNYYDGQGFLVPKSLGVSSAKELDGATVCIQTGTTTELNLAD FFRANNISYEPVPIETNAEGQQQYLAGACDTYTTDASGLASTRAAFENPGDHVILPEI ISKEPLGPLVRHGDNDWGDIVRWTFYALVAAEEMGITSANIGELSAAAGANPEINRIL GTEGELGAMIGLDNDWAKRAISVGGNYGEIFEKNIGEKTPIGLARGLNAQWTQGGIMY APPFR" gene 395325..396539 /locus_tag="RTM1035_01915" CDS 395325..396539 /locus_tag="RTM1035_01915" /note="COG4597 ABC-type amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine" /protein_id="jcventer:1101493006646_RTM1035_01915" /db_xref="CDD:34232" /translation="MTTMTDPPKASFQLSMLIYDTRYRSYTFQFIALVLLMLLLGYLG ANLVNNLAAQGQNISFGFLSNPANYDINQRPIEYDSQSSHLRASLVGVINTLIVAFLG CATATIFGVTAGVLRLSPNWLVRKLMAFYVEIFRNIPVLIWILIIFTVMTAVLPSPNQ FRGDNADASMLFDAFAFTNRGIYTPAPVWGPGSLVVVLTFLASIFGVFAYRRYATKLL YDTGRLLPMGWPSLVILFVPTILIYFVLGQPISLNYPALKGFNFDGGLHIRGSLIALW FALAIYTGAFIAENVRAGIQAVSKGQTEAAASLGLRPNRIMNLVILPQALRVIIPPLI SQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQTGRAIECVLMLMLFYLTISLAISAIM NVYNNSIKLKER" gene 396542..397831 /locus_tag="RTM1035_01920" CDS 396542..397831 /locus_tag="RTM1035_01920" /note="COG0765 ABC-type amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein" /protein_id="jcventer:1101493006646_RTM1035_01920" /db_xref="CDD:31108" /translation="MGRDQFAFVRKHMLPEAPPPATQTGAIKWLRENLFSSPGNALLT VVSAYVVFQIVISATPWFLNGVWDSPSLSACREILDGKTGACFAVLSERWNQLLFGFK YPSELYWRPGLAFVLLFIAAAPVLFGKVFPRKMLIFTGLYPFIAYWLIWGGSLMVPVF ALIGVLVGAVVYSRVVTVNAGVAVIAAFVAALIFWILSGYVTGPMENVLAIEAVASRD MGGFMINLMLGVVCVSLSLPLGILLALGRQSSMPIIKWICVVFIEFIRGVPLITLLFV ANVVLAYFLPPGTNFDLILRVIIMITMFSSAYIAEVIRGGLAALPRGQYEAADSLGLD YAQAMQLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDIVGMIRGPILASAEWN GVYWELFGFACVLFFITCYGISQYSQWLERQLRTDHR" gene 397846..398613 /locus_tag="RTM1035_01925" CDS 397846..398613 /locus_tag="RTM1035_01925" /note="COG1126 ABC-type polar amino acid transport system, ATPase component" /codon_start=1 /transl_table=11 /product="glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01925" /db_xref="CDD:31323" /translation="MAAETQMNVSDQVAVEITKMNKWYGAFHVLRDIDLTVYQGERIV IAGPSGSGKSTLIRCINALEEHQKGKITVDGTLLSNDLKNIDKIRSEVGMVFQHFNLF PHLTILENCTLAPIWVRKTPKREAEEVAMHFLEKVKIPEQANKYPGQLSGGQQQRVAI ARSLCMRPRIMLFDEPTSALDPEMISEVLDTMIQLAEEGMTMLCVTHEMGFARKVANR VIFMDQGQIVEQNEPEEFFNNPQSDRTKLFLSQILGH" gene complement(397959..398354) /locus_tag="RTM1035_01930" CDS complement(397959..398354) /locus_tag="RTM1035_01930" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01930" /translation="MRGRMHKLRAIATRCCCPPDSWPGYLLACSGILTFSRKCIATSS ASRLGVLRTQIGASVQFSRIVRCGNRLKCWNTMPTSDRILSIFLRSFDKSVPSTVILP FWCSSSALIQRMSVDLPDPDGPAMTIRSP" gene complement(398718..399833) /locus_tag="RTM1035_01935" CDS complement(398718..399833) /locus_tag="RTM1035_01935" /note="COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein" /codon_start=1 /transl_table=11 /product="acetoin utilization protein AcuC" /protein_id="jcventer:1101493006646_RTM1035_01935" /db_xref="CDD:40927" /translation="MQTPLFIGSEIYRGSSYGARHPLSIPRVPTVIDLCRALGWLPPS QYRISPRAKPQALTAWHSPAYIAALQAAETLGQVSPEIRARHQIGTLSNPVFPEMFRR PATAAGGSLLATELLAHGGVAYNPGGGTHHGMADHAGGFCYLNDPVLAIKAFLAQGLS RIAYVDIDAHHCDGVAAAFHGDPRVLMISTHEAGRWPFTGTVDDRAGGHALNLPLPRA TNDSGFAMALHEVILPAVQAFTPHALVLQCGADAVTEDPLSRLALSNNAHWEAVALLR PLAPRLLVLGGGGYNPWTVGRLWSGVWATLNNTEIPDRLPEPARAILAALSWSRRPAF PDEPLIDTLRDAPRPGPIADDLRASIQHLRARRAAWV" gene complement(399841..400329) /locus_tag="RTM1035_01940" CDS complement(399841..400329) /locus_tag="RTM1035_01940" /note="COG2062 Phosphohistidine phosphatase SixA" /codon_start=1 /transl_table=11 /product="putative phosphohistidine phosphatase, SixA" /protein_id="jcventer:1101493006646_RTM1035_01940" /db_xref="CDD:32245" /translation="MKTLILMRHAKSDWGDPRLPDSARPLNARGCRAATALGHWLRSQ DLAPDQILCSSAVRTQETCTRLKLDTAPDLHDALYLAEADEMLTVLRRATGSLVLMLG HNPGIAEFAALLVAAPPDHERFDDYPTGATLIARFDIADWAALQPGSGTVLQFLTPRD LP" gene complement(400326..400970) /locus_tag="RTM1035_01945" CDS complement(400326..400970) /locus_tag="RTM1035_01945" /note="COG1145 Ferredoxin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01945" /db_xref="CDD:31788" /translation="MSPLPPALYDLAAAHHLTLSGALHLASGDVPGHQTLVLLSPAEP GFWPHFTATPEYLDGARDPMNRWSIRVITAMADALGATPLFPFSGPPWLPFTDWARRS GRAWPSPVGLLVHDAAGLMISYRGALAFADRFALPPTGPRPCDRCADQPCRSACPVEA LIPEAYNVPACKADLDRPGNDCRARGCAVRRACPLSQFYGRREEQSAFHMGYFG" gene complement(400980..401885) /locus_tag="RTM1035_01950" CDS complement(400980..401885) /locus_tag="RTM1035_01950" /note="COG0548 Acetylglutamate kinase" /codon_start=1 /transl_table=11 /product="acetylglutamate kinase" /protein_id="jcventer:1101493006646_RTM1035_01950" /db_xref="CDD:30894" /translation="MKARDMNRDWIATARTLSEALPYLQRYTGAIVVIKLGGHAMGSD EAMDTFARDVVLMRQVGVNPVIVHGGGPMINQMLEKLAIKSDFVNGKRVTDAATMDVV EMVLSGQVNKRIVAAINGQGGRAVGLSGKDARLITCTPSHPDLGLVGDPSEIDPTILH TLFAAGMIPVIAPLGAGEAGETYNINGDTAAGAVAAALKADRLLLLTDIDGVRDASGQ VVTELSAEQIRQMTRDGIIAGGMIPKTETALAAIDGGVRAVVILDGRAPNATLLELFT EHGAGSLIRGTNTPRVPRSSYPGQS" gene 402014..402745 /locus_tag="RTM1035_01955" CDS 402014..402745 /locus_tag="RTM1035_01955" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="jcventer:1101493006646_RTM1035_01955" /db_xref="CDD:40206" /translation="MSETKTLLLTGASRGIGHATVRRFNAAGWRVITCSRQPFPAECP WGGGADNHIQMDLSDPNDVIAKVEVLRERLGGRLDALVNNAGISPKGPEGERLDTFST DLRTWGQVFHVNFFASVVLARSLRDELAAARGAVVNVTSIAGSRVHPFAGAAYATSKA ALVALTREMAHDFGPLGVRVNSIAPGEIRTAILSPGTDKLVESIPMRRLGEPDEVANT IFFLCSDGSSYISGTEIEINGAQHV" gene complement(402800..403279) /locus_tag="RTM1035_01960" CDS complement(402800..403279) /locus_tag="RTM1035_01960" /note="COG2335 Secreted and surface protein containing fasciclin-like repeats" /codon_start=1 /transl_table=11 /product="beta-Ig-H3/fasciclin" /protein_id="jcventer:1101493006646_RTM1035_01960" /db_xref="CDD:42446" /translation="MFRRTYLALTAAVLMAGPAFAETKGKDIVDIAAGNESFSTLVAA VQAAGLVDTLKGEGPFTVFAPTNDAFAALPAGTVEDLLKPENKDQLTAILTYHVVPGK VMSGDLSDGMTATTVQGTDVTIGTTDGVTVAGAKVVQADIEASNGVIHVIDTVILPE" gene 403551..405155 /locus_tag="RTM1035_01965" CDS 403551..405155 /locus_tag="RTM1035_01965" /note="COG0069 Glutamate synthase domain 2" /codon_start=1 /transl_table=11 /product="glutamate synthase family protein" /protein_id="jcventer:1101493006646_RTM1035_01965" /db_xref="CDD:28786" /translation="MKHWANPPFVSLFDTLEWRRLRARRVGWARAGYWSFEMGILTQF LEFLALLFVFAIGAVVLAIGVFYVLDRTQPGDAIRRNYPVIGRFRGLFTKLGEFFRQY FFAMDREEMPFNRAQRDWVSHATKGAGNTIAFGSTRNLGVPGTPIFVPAVFPPLDDQF AITAPMQIGPTAAIPYMAKSIFNISGMSYGAISRPAVEALSRGAAKAGIWLNTGEGGL SPFHLVGNCDLVYQIGTAKYGVRDALGNLSDARLREVSDNPCIKMFELKLAQGAKPGK GGILPGEKVNKEIAAIRGIELGKDSISPNRHADINDYGELLDVIGHIRQVTGRPVGFK TVIGSSEAWEPLFEMIIARGPDCAPDFIAIDGGEGGTGAAPMPLMDLVGMPIRDALPR MVDLRDRYGLKDRIRMIAAGKLINPGDVAWAICAGADFVASARGFMFSLGCIQALKCN RNTCPTGITTHDPHLQRGLVVEDKYLKVANYAKSVIKEVETIAHSVGVAEPRLMRRRH VRLVQADGTSIAFNKIRPSYNPDAVL" gene 405231..406145 /locus_tag="RTM1035_01970" CDS 405231..406145 /locus_tag="RTM1035_01970" /note="COG2041 Sulfite oxidase and related enzymes" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01970" /db_xref="CDD:29402" /translation="MAHRWTNTLSDTDVTPEAAFLNRRQMIAGVAAGVGLSLTARSAQ AETEAEALTPNSWDDITTYNNYYEFGTDKGDPARNARTLTVSPWSVTIDGLVDRPGDY AFDEIMAKMTIEERLYRFRCVEAWSMVVPWNGFELADLLDLAGVQSEAKYVAFETVLR PDEMPGVRYPVLDWPYVEGLRLDEALHPLTIMATGIYGRDIPNQNGAPLRLVVPWKYG FKSIKSVVRITLTDKEPPTSWNKANAREYGFYSNVNPEVDHPRWSQATERQIGGGLFS PRVPTLMFNGYADEVAGLYAGMDLKKNF" gene 406145..406747 /locus_tag="RTM1035_01975" CDS 406145..406747 /locus_tag="RTM1035_01975" /note="COG2717 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01975" /db_xref="CDD:45154" /translation="MLRDQINGVARRVPVWAVWLIGLMPGVWTFYLGLTGGLGAEPIK ALERELGEVALQLLILGLCITPLRRHVGVNLIRFRRAVGLLTFSYVAWHLLVWLVLDV QILAQIWADIVKRPYVTIGFAAFLLMIPLALTSNDWSVRRLGPKWRALHRLTYGVAVL GAVHFLWLSKGFQIEPLVYLAVILGLLALRWRPIGQSRRV" gene 409047..409120 /locus_tag="RTM1035_t02992" tRNA 409047..409120 /locus_tag="RTM1035_t02992" /product="tRNA-Ile" gene 409299..409371 /locus_tag="RTM1035_t02994" tRNA 409299..409371 /locus_tag="RTM1035_t02994" /product="tRNA-Ala" gene 413093..413166 /locus_tag="RTM1035_t02996" tRNA 413093..413166 /locus_tag="RTM1035_t02996" /product="tRNA-Met" gene complement(413126..413551) /locus_tag="RTM1035_01980" CDS complement(413126..413551) /locus_tag="RTM1035_01980" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01980" /translation="MLSTRLKKAIYRATGGTEAGTCVFEARYHAFNRKQLIQLSCRST LRPDGFALSPRHCAAWEHMLEAKEAIRGLIEKSVLHPDPTTGRMSVHLHVALAGILAL SLGGAGKSGQQKTSLEQEVTQSIEFLVAGVGFEPTTFRL" gene 413577..414230 /locus_tag="RTM1035_01985" CDS 413577..414230 /locus_tag="RTM1035_01985" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="regulatory protein, TetR family" /protein_id="jcventer:1101493006646_RTM1035_01985" /db_xref="CDD:31500" /translation="MPRPTKQFPERGDARTRLLEAARDVIRRKGFAATSVDDLCQSAG VTKGAFFHHFKTKDALGVAAANFWAETTSALFASAPYHEPDDPLDRVLAYLDFRRDII GGETFEYTCLVGTMTQEVHDSAPAIRDACAASIFGHAATLEADIEAARAQRGIEADWT AASLARHTQAVLQGGFILAKATGDSDLARESVDHLVRYVRGLFGLGPNTSEISKGER" gene 414227..414655 /locus_tag="RTM1035_01990" CDS 414227..414655 /locus_tag="RTM1035_01990" /note="COG3832 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_01990" /db_xref="CDD:45048" /translation="MIMTRQQITVETTVSVSVEEAWSAYTTPDDITQWNFANDDWCCP RVESDLRPGGKYIARMEAKDGSMGFDFQGTYEKIEPHKELSLVLGDGRKSRTTFTENS GTTKVATAFDAETQNPTDMQRDGWQAILNNFKAHVDGKEG" gene 414720..415202 /locus_tag="RTM1035_01995" CDS 414720..415202 /locus_tag="RTM1035_01995" /note="COG3865 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="putative DNA-binding protein" /protein_id="jcventer:1101493006646_RTM1035_01995" /db_xref="CDD:33655" /translation="MEHASKVRTCLWFEKGGHDAAQEYVALVPDSRIEAVRENGQPND PMIVEFTLAGAPMMILTAGPHHKLTPAVSISVLTEDQDETDRLWGALTGNGGEAGPCG WLVDRFGVSWQIVPKRMPDLLASDDPGVVVRVSEAMMRMGKIDIAALDAVAAKGPAHG " gene 415195..415731 /locus_tag="RTM1035_02000" CDS 415195..415731 /locus_tag="RTM1035_02000" /note="COG3791 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02000" /db_xref="CDD:33586" /translation="MGETTRIACKCGQTRLEVEGKPIKSVECCCTSCREAAVRMQRLE GAPRTVTDHGTTPFVMYRKDRVRFLAGADTLAGFRLSPEASSRRVIATCCNTPVYLEF KGGHWLSFYSGLWPAGTKPAPTMRTMTSDLPEGSTLPDDIPNAKKHSLGFFAKLFGAW VAMGFRSPKMSNTGEINV" gene 415724..416029 /locus_tag="RTM1035_02005" CDS 415724..416029 /locus_tag="RTM1035_02005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02005" /translation="MSDTDEKIEIESITSPNHVQRVNKAKFMAMRDALLPVLPSEGPG MTVAEAKAALLPNLSQELFPGGEKAGWWLKAVQLDLEAKGVIARDGKRPVRLVRTGK" gene complement(416567..417685) /locus_tag="RTM1035_02010" CDS complement(416567..417685) /locus_tag="RTM1035_02010" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator protein, LacI family" /protein_id="jcventer:1101493006646_RTM1035_02010" /db_xref="CDD:31797" /translation="MQYFEASSKAAIVAEQGSDKFMKFALINAKDIMQRPTTKDLAKA AGVSRATVDRVLNNREGVKKHTVDRVNKAIEELGFVRNIQAANLARSQRYRFVFALPR SGDLFLEEIIRHINEANETFAADLIWCDAEHINENDPHSISAFLATLDASETTGVAIM APESPQVRDAIYRLQQRGVAALPFIADQSSMEEHWVGTNHTAAGATAATLIGRFSARA HGAVLVISESMRSRDSLERRIGFDAELNRYFPNLTALPSLETYGDEARAEQVIQNALK NNPDLVGVYILSSEARIPLTILNGIGGTSSLIKIVHERTPFTETALREGKLDAVIAQD PGHLVRSAVRKLKAITDKRVAKGSQERIRVEVLMRTNI" gene 417878..419131 /locus_tag="RTM1035_02015" CDS 417878..419131 /locus_tag="RTM1035_02015" /note="COG1653 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="probable sugar ABC transporter, substrate-binding protein" /protein_id="jcventer:1101493006646_RTM1035_02015" /db_xref="CDD:31839" /translation="MAEDLTLCWAAWDPANALIELSKDFEAQSGHTMSFEFVPWTSFA DRMLNELNSGGQLCDLMIGDSQWIGGGAENGHYVKLNDFFEANGISMDDFLPATVTGY AEWPKGTPNYYALPAYADVVGWTYRKDWFERPELQAEFMEKYGRALDVPASLEELRDI AAFFQGREIDGTTVYGAAIYTERGSEGITMGVTNVLYNYGFEYENPEKPYDLEGFVNS AGAVAGLELYKEIYDTGTPPGSSNWYMGENIDAYRSGQVAMQMNFAFIWPGVEADENV GGGKSGYFPNPAGPAGQFAQLGGQGISVVAYSQKQDAALEYIKWFAQPEIQQRWWDLG GAPALRAVVEAEDFAASQPYAQAFLDSMAIVKDFWAEPAYADLLIPMQERMHNYVIAG EGTAQEALDGLVRDWTEVFEDEGKL" gene 419260..420207 /locus_tag="RTM1035_02020" CDS 419260..420207 /locus_tag="RTM1035_02020" /note="COG1175 ABC-type sugar transport systems, permease components" /codon_start=1 /transl_table=11 /product="probable sugar ABC transporter, permease protein" /protein_id="jcventer:1101493006646_RTM1035_02020" /db_xref="CDD:31368" /translation="MTLPPMERAAAKTPDGIAKRIRGLSDRTIAWIFVAPTIFLLLAV NIFPLIWTIRLSFTDFRVNRPNNDVEWVGLRNYERILSDPDVWNTMQATAHFLIWTIA LQVLIGFTLAYLINKKFRGNDMWTTIIVFPMMLSPAVVGNFWTFLYQPQIGLFNYVVA FFTGADPASFSMIGDVNLAPWAIIIADTWMWTPFVMLICLAGLRSIPDSIYEAAECDR ASKWRQFWTITLPMALPFLMLAVLFRGIENFKMFDLVVQLTGGGPGNTTTLTSIDLKR EAFEKWRTGYSSAYAVILFVTVFGLASIYVKALNKVKER" gene 420204..421142 /locus_tag="RTM1035_02025" CDS 420204..421142 /locus_tag="RTM1035_02025" /note="COG0395 ABC-type sugar transport system, permease component" /codon_start=1 /transl_table=11 /product="probable sugar ABC transporter, permease protein" /protein_id="jcventer:1101493006646_RTM1035_02025" /db_xref="CDD:30744" /translation="MSFSVTEPTKGTKWFAGILVVTYACITLVPLLWIIATGFKSPTD SIAYPPVVVFEPTLEGYVNLFTDRTRATEDMLEAAGPAETWYDQIARDRGTVISGPSR YGERFLNSVIIGFGSTALCMILGTMAAYAFSRFKVPLKDDLLFFILSTRMMPPIAVAI PIFLMFRTLGLNDTHLGMILLYTAVNLSLSVWLLKGFIDEIPIEYEEAALIDGYTRFQ AFYKVVLPQAATGIASTAIFCLIFAWNEYAFAVLLTSGTAQTAPPFIPTIIGTSGKDW PAVAAGATIFLVPVMVFTILLRKHLLRGITFGAVRK" gene 421139..421327 /locus_tag="RTM1035_02030" CDS 421139..421327 /locus_tag="RTM1035_02030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02030" /translation="MMNIIYRMLRFRRGPWEMLATILIALGVTMLMQPFAIGLYSYSF IVTLVGTVMFIIVSHFPE" gene 421354..422427 /locus_tag="RTM1035_02035" CDS 421354..422427 /locus_tag="RTM1035_02035" /note="COG3839 ABC-type sugar transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="probable sugar ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006646_RTM1035_02035" /db_xref="CDD:33631" /translation="MRKDFGAFNAVKSSTFTIEDGEFFMLLGPSGCGKTTTLRMMAGL ELPTSGEIYIDNEEVGMKPASQRDIAFVFQMFALYPHMNVGKNISYPLRSQGMPKVQI KKKVDEIAEILGITDILNKPVGGLSGGDRQRVALGRAIVRDPKAFFMDEPLGALDAEF REHMSKELRALHDRMSATTVYVTHDQLEAMQMGDKIVVMNHGVVEQFGVPQDIYDWPA TKFVAAFIGSPPMNFLEFNGMVGKGGTEVRLNDVALAVPASLDGANGALTFGVRPEHV RLDDAAPYRGRVKATEYLGTTQIVTLETANGEVKARVASSDRISAGDQTGLAFDARTI TLFNADTGAALRSQANQGVLFRG" gene 422468..423415 /locus_tag="RTM1035_02040" CDS 422468..423415 /locus_tag="RTM1035_02040" /note="COG3839 ABC-type sugar transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="probable sugar ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006646_RTM1035_02040" /db_xref="CDD:33631" /translation="MALDEVTMTIPDGAFVVLLGPTGAGKTTTLRMVSGLDKPDSGSV TIGGRDVTALTPAQRDVAMVFQQYSLYPHLTVRQNLEFPLKSPILKTPQAEIDRKVGA VAEVLQISHKLDNKATALSGGEMQRVSIGRALVREPSVYLMDEPLSSLDAKLRSDLRI ELKSIQADSGATMLYVTHDQTEAMTMATHVGVLDSGKLVQFGSPREIYENPVSVYAAS RLGQPRINVLPSDVFGGAPRGAAQIGLRPEQIVQGEGEDSFVQRVEHLGDQTRLHLKF KSHDLITVTDAHTTLKEGDIIQIRPNNPFFFDASGARIS" gene 423426..425045 /locus_tag="RTM1035_02045" CDS 423426..425045 /locus_tag="RTM1035_02045" /note="COG2376 Dihydroxyacetone kinase" /codon_start=1 /transl_table=11 /product="dihydroxyacetone kinase protein" /protein_id="jcventer:1101493006646_RTM1035_02045" /db_xref="CDD:42689" /translation="MKHFINEKHDMVTEAIDGTIAASGGKLTRLDGYPHIRVVVRSDW DKSKVALVSGGGSGHEPAHAGFVGEGMLTAAVCGDVFASPSVDAVLAAILAVTGTAGC LLIVKNYTGDRLNFGLAAERARAFGHKVSVVIVDDDVALPSLPQARGLAGTLFVHKIV GAMAEGGANLEACTIAAKRVIAGSRSIGLSLDTCSVPGSLKEDRIPFGMAELGLGIHG EAGVAQVASAGAADAIAKMIEALVADMPRTPHVALINNLGGASCLEMAILTNNLLGSE IGQYIRLVVGPSAMMTALDMHGFSISLCELADGDEGFLKAPAKVTGWPGCNSVTAPAV LPLPDGLTPIRAPASAHAPTREFLTDCCKVLIAAENDLNLLDAKSGDGDTGSTLAGAA RALIDAMDRLPLADHTQLYRAIGLELSQTMGGSSGVLLAIFFAAAGDASSSGMTMRDA LMAGLDRMRQIGGANPGDRTMVDALLPALDALSAGLPQAAAAARKGAKYTATLTSAKA GRASYINAEQLEGHIDPGAEAVARLFEHLAS" gene 425644..427107 /locus_tag="RTM1035_02050" CDS 425644..427107 /locus_tag="RTM1035_02050" /EC_number="1.1.1.49" /note="COG0364 Glucose-6-phosphate 1-dehydrogenase" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="jcventer:1101493006646_RTM1035_02050" /db_xref="CDD:42737" /translation="MVSRVIPVSSFDLVIFGATGDLAQRKILPGLFRRFSVGQMPRDA RIIATARSEIDTDMFRADLRTSLAEFAPCSSGDAEMLDQFLATIVYIHLDVMSQEGWS ELVGLLRGSAVRAFYLSVSTSLFGTIASRLSSYGAVTPESRIVVEKPFGNDLAIARAL NADLRQGFEESQIYRIDHYLGKETVQNLMALRFANALWEPLWNSTHIDHVQITVAESL GVEGRGEYYNRAGAMRDMVQNHLMQLLCLTAMEPPSRFEPNAVRDEKVKVIEALAPAK PQEIVRGQYRDKEGQGSYRAHAGDPTSRTESFVAMKVAIANWRWAGTPFYLRTGKRLR ARTSEIAVVFREPPHMIFPEMENRRSNQMIIHLQPDEGITLHNTIKEPGPGGFRLAEV TLDMTFANALGGQTDSQDAYERLIMDVIRGDQTLFMRGDEVEAAWAWVDPIIARWEEA RHAPEPYDAGGSGPEEALMLMHRDGRRWREIGRVEDK" gene 427104..428912 /locus_tag="RTM1035_02055" CDS 427104..428912 /locus_tag="RTM1035_02055" /EC_number="4.2.1.12" /note="COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase" /codon_start=1 /transl_table=11 /product="phosphogluconate dehydratase" /protein_id="jcventer:1101493006646_RTM1035_02055" /db_xref="CDD:40995" /translation="MTLNSTIEAVTDRIIARSSKTRDAYLKRMRAAQSKGPARSHLAC SGQAHAYAAAESDKARLVEDVSGNLGIVTAYNDMLSAHQPFATYPDIIKHAVREIGGT AQVAGGVPAMCDGVTQGEAGMELSLFSRDVIALAASVALSHNTYDAAVFLGVCDKIVP GLLIAAQAFGHLPAVFLPAGPMTSGLPNDEKSKVRQRFAAGEVDRAALMEAEMAAYHG PGTCTFYGTANTNQMLMEFMGLHLPGASFVTPNTPLRAALTAEGAKRALSLSALGESY TPVCDILSEKAFVNGIVGLNATGGSTNLLIHLIAMARAGGIILDWEDFSDLSEATPLI ARVYPNGLADVNHFHAAGGLGYMIGELLGAGLLHPDTKTVAGEGLEHYTTEPKLADGR LSWQPGARKSLDDRILRTVADPFQLTGGLARLSGNLGTAVMKVSAVAPEHQIVQAPAR VFHDQNDVKAAFKAGELTGDLVVVMRFQGPKANGMPELHSLTPILSILQGRGQKVALV TDGRMSGASGKVPSAIHVSPEALDGGLIAKLKDGDILRVDATTGVLQCLTEGVGERPA AAPDLSSNHHGLGRELFAAFRRSVGTADKGASIFGE" gene 428916..429569 /locus_tag="RTM1035_02060" CDS 428916..429569 /locus_tag="RTM1035_02060" /note="COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase" /protein_id="jcventer:1101493006646_RTM1035_02060" /db_xref="CDD:31143" /translation="MTLSPKNASRQTRALCELAPIVPVLVINDAAAARPLAEALVAGG LPVLEVTLRTPAALDAIRAMAQVRGGHVGAGTLVTPDDVRAAKAAGATFGVAPGATEK LLAACEAEGLPLLPGAATASEAMALLERGYDMLKFFPAEAAGGVAALKAIGAPLPQIS FCPTGGINPDNAPSYLSLSNVVCAGGSWVAPEALVAMGKWDEIEELAREAAKLRAAP" gene complement(430040..430414) /locus_tag="RTM1035_02065" CDS complement(430040..430414) /locus_tag="RTM1035_02065" /note="COG2246 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02065" /translation="MSRQFLSFAGVGAVATAAHYLTLLALVEGSLAHPAPASAAGAAV GALVSYALNYRLTFAAQSPHRKALPKFLAIAVFAMILNFVLMHALITLLSLPYIAAQV AVTGVMLLLTFNANRNWTFGRE" gene complement(430411..432648) /locus_tag="RTM1035_02070" CDS complement(430411..432648) /locus_tag="RTM1035_02070" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02070" /translation="MIRPDPFPQGGYRLAAVFIATAWLVFCWPWLGGGQIIPHDAKNH FYPMVRFLALAWHSGESPFWSPYHFGGFPMVADPQSVIFTPSFWPAVLAGPAPSMRLV DAIHLLHLLVMGLAILGFARLRGWRVEAGAAAAICFMLSGALTVRLEHLLMTVSMMWL AVCLWRLEAVLTHGGIWRGIAFGVALGLMLIDRNHVAYLAAWFLGFYWLSRSWPGSGQ TVPLRHQTPVILGGITALCLAAIPILLLLQLAEISNRPSFDYEGASLQSLHPAALATL FMVDIFGPLDRAGAYWGPASHAWGGQFFVHRGMLHGYVGALALVLILWHGIGAGRLWR REALVFTLLAILFLIYALGHYTPVFEWLYDTVPGIDLFRRPADALFLFGASAALLTGA LMNDMLRAPSRLSTVGSLAALVLTISGAVFVGLLGAKQGHLADLGLPAARALAYSAIL LALLIMAVRVRGTLQRSLLAAILLISAVDLITAHSNIRLNASLPQFYDQLETPAAYDH IARLAALSKATDPSGAPWRVETIGLGASSQNIGQAAGIEALLGYNPIRLRAFDSLIAP KHQNNASANRRFGTAMTSYDSVMADQLGLRYIMTGKPVEKIDGTLPQDALQEVAVIPY LDRNFYLYENRDAKPRAVLLPATDAGATPGPQPRITRYTNVVVEVSAECTSPCRLVLH DFAYPGWTATANGVPVPLVIQDGLFRAVDLSVGQNEVTFTFSPLALENLQAALIGVLG GEGTP" gene complement(432645..433754) /locus_tag="RTM1035_02075" CDS complement(432645..433754) /locus_tag="RTM1035_02075" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02075" /db_xref="CDD:30811" /translation="MNDNEFVFEQDIPLIDTTPAIQNGSARSAASLSVVVPAYNEAGN IRAFLDRLLPCLERTRAACEIIFVDDGSADKTPVCVAEQCALDARIKLIRLSRNFGKE AALNAGLSHAIGDLVIQIDVDLQHPPETIDAMIKEWSLGADIVYAKRNSRQDESWMRR FLARSFYRVFGLICDVKLMEGAGDFILLDRKVVDALMQLPERGRFTKGLYAWVGFRRK AVPFDVAPRAHGQSGWPLLKLARFAMDALTAFGSLPLKVWTYIGLLLAFASTLYGAVI FVQKLAFGIDVPGYASLMVAVCFLSGVQLLGLGIMGEYVSRIFAEVKQRPMFLVQERI GFDQRPYMPQTSLQMPPSVVAPSKAQSRGLDTFVS" gene 433895..434785 /locus_tag="RTM1035_02080" CDS 433895..434785 /locus_tag="RTM1035_02080" /note="COG3394 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02080" /db_xref="CDD:44700" /translation="MDKIIETPMTWGGRIHLCADDFGLNAAVDEGILDLVHLGRLTAV SCMAGGVEITRDIPRLLAAVSDAPRPVQIGLHVTLTEYTTLGPIRGLAPECALPGIGR VMRQAYLRRLDVPAIRMEIDRQMACLSALMGRVPDFVDGHQHVHLLPGIRDAVAASWK DWNVRPGWVRYCGAPERDLAQLPSAQFKSRVLSLMSRAAAPSHDEAGMVTNPRFFGVT EFSPEVPFGPRMRRWLSLANSGESGALIMCHPGRASVPAAGDPPDPIHLHRPQELAYL ASEAFLTDLAETGVATRFGL" gene 435448..435549 /locus_tag="RTM1035_02085" CDS 435448..435549 /locus_tag="RTM1035_02085" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02085" /translation="MDDLLECDHVFVLELPFAGHVGVFIPARVAEAE" gene complement(435573..436490) /locus_tag="RTM1035_02090" CDS complement(435573..436490) /locus_tag="RTM1035_02090" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006646_RTM1035_02090" /db_xref="CDD:30928" /translation="MKIGLRHIRYFLVLAEDLNFRRASEHLHISQPALTRTIQHLEAE LQVTLFDRSQNFVRLTDAGRAFREGGQRVLNGVEATIDLTRRVSIGEAGALRVGYTDF AIADALPELLKQFHQRHPGITVRPHHGVTAAQLQQLRDDKLDIGFVTGPVRQPGFRSR VVQTDRPICIVPEGHRLASRSSVELADLADEDFVHGPTEAWAHFYDYLFPHCRKAGFQ PRIVQEAFNSVGILGLVSCGMGITILTESIYDFATGGLVPLPISDIDDVMVTEAVWAS ENLRLPTQHFVDFLEQSDSHRLQGAQRLK" gene 436585..437601 /locus_tag="RTM1035_02095" CDS 436585..437601 /locus_tag="RTM1035_02095" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter- DctP subunit" /protein_id="jcventer:1101493006646_RTM1035_02095" /db_xref="CDD:31825" /translation="MQPGAIMSHSPFQIFAGPLAALTVVAGTASAQDVTINLGYAASE TSTYAVLADKFEELVEEYTEGSVDVKVRCCGQLMGEDEAFKAMQLGTVDMFVITGNNI SPHFPLMDAFVLPYIFQNKEHAYRVLEGEVGRDFAAQLQAATNVHLLTYGFVGDRDFY NSRSPIASVEDMAGLKVRVPKNQVMIDTYEEFGAAPIPLPWADTPTALQTGTVEGADN GTSFIKSQKFYEIMPYFTVLEHFTYFSPLFASDRVMNKLDEAQRDAVMRAAAEAGVYH RKEMAAQTDEIRAFLTGEGGMETTNVDRSGFIEAGLRVQDRYAADKGDDFIALVNAIR AEAE" gene 437675..438157 /locus_tag="RTM1035_02100" CDS 437675..438157 /locus_tag="RTM1035_02100" /note="COG3090 TRAP-type C4-dicarboxylate transport system, small permease component" /codon_start=1 /transl_table=11 /product="Tripartite ATP-independent periplasmic transporter, DctQ component" /protein_id="jcventer:1101493006646_RTM1035_02100" /db_xref="CDD:44203" /translation="MLSKLDRYFEEVICTICLTVVVGSVLLQVILRYFFSTAAAWAEE TAVYGMIFAVYLGATMAVRERAHIRITLLVSRLPRALQVGAVVLADALWAGFVIFMIV QTTIYTQLLFNVTYMTPGLGIEQRWVQMIIPMAFGLMLFRILQVYWRWGRDGWKDLPL " gene 438154..439449 /locus_tag="RTM1035_02105" CDS 438154..439449 /locus_tag="RTM1035_02105" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter- DctM subunit" /protein_id="jcventer:1101493006646_RTM1035_02105" /db_xref="CDD:31781" /translation="MNGPLVMAAAFVFAMAIGVPIPFAAGLATVAGLLIADIPLTLMA QAAWTAFEPFPLVTIPLFILAGQLMEQGGMSEKLVTIAKRLVGAYKGGMGLVTVVACM FFAALSGSGPATTAAIGSITIPAMQKEGYRSRFAGAIAASAGALGSMIPPSNLLIIFA LVTDVSIPRLFLAGILPGLILGLMLMVVVFVISWKNGYGGTEERFRWGPLLWALWDGK WAVFAPILILGGIYAGIFTPSEAAAVAVAYGLFVGLFVYKGLTWVKLLHAFKFTAIVI GTVLFILGSTKAFGQLVTIFDIPSDILTLFQGLIAYPWLIMLFIGIFYILVGMWLESI PQIIIFTAVFFPLVTSLGIDPVVFGIFTVMTCEIGFLTPPIGVNLFVAARIGKISIED ISVGVLPLLIPYILMILILVFFSDWVTWLPNLVYGPQLR" gene 439454..441556 /locus_tag="RTM1035_02110" CDS 439454..441556 /locus_tag="RTM1035_02110" /codon_start=1 /transl_table=11 /product="probable N,N-dimethylformamidase large subunit" /protein_id="jcventer:1101493006646_RTM1035_02110" /translation="MNEVPLTGYTDRLSARPGEEIAFKVSSTSGGRYRAWLARSTCAD PNPDGMGITEEDASAWFAPRDLPARHQPFFPGSYGLSDAAITLPAQGNVTLSATIQPT HLNGGDQAVLSCGPLTMGLNAEGCVFVAAGAARVTSPVPLPTHRWAQLEVRLTEGRAT LVQTVLGHHSCETHEASGALPRAAITAPVVLAAGWADTRATTFFNGKIEGPTITGPDG LIAVWDLATAIPSARVPALTGPALSLVNFPTRAMTGSQWDASEMCWRHKPEHYGAIHF HEDDIYDFGWQTDFTLTVPEGMPSGVYIMYIEGDHGSDALPFYICPPKGIRRADLCVL IPTFTYVVYGNHARPDYDPAWQSRMRDWGAYPHNPAEYREYGLSTYNTHSDGSGICHA SHRRPLFNLRPGFLTFGATGCSGLRHFAADSHLISWLHAKGLEYDIVTDHELHAEGAE VLAGYKAVTTTTHPEYHTAETLDALRDYRDSGGNLLYLGGNGFYWRIARHTENDSLLE IRRAEDGIRAWAAEPGEYYNAFDGTYGGLWRRSGRAPQALVGIGFAAQGEFYGAPYQR MCFDPKFDWLFEGVTEDLFGDYGFSGNGAAGFELDHVDHRIGSPLDHVLLARSAGDNQ AFMLVPEEQLTHLTNLTGGSEEDAKHADLIYFDLPKGGSVFSVGSITFCGSLPWNGFD NDVSRLLDNFLRCKLGQQ" gene complement(441757..442950) /locus_tag="RTM1035_02115" CDS complement(441757..442950) /locus_tag="RTM1035_02115" /note="COG3210 Large exoproteins involved in heme utilization or adhesion" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02115" /translation="MLEVFMAITSNVLDGGIAFNEWHSISFTTDYNGDGQANGGVEAY VELVNTSASSIDISGYQYFHINNGLVSQLAHTVPGGTTLAAGETYTIVSNNGSLTATM PSNITGQGAVADIAMNQSADVNLFLANPEGDFIVLQENGGNAFLGDDIIAAGLNPANQ VGIDVVTAAGADQSIARVTDGEDTFETQTPSPGEPNCFFAGSRIATPSGMKAIEELAV GDQIMTASGRIVPIVWLARQTLSTKFGRPDALPVRIMAGALGEGLPIADLTLTADHAV VIDGVLVNAGVLVNGTTIVTVPLTELENSYTVYHIEIDEHDVILAEGLPTESFVDYTG RDAFDNHAEYLAMYGGDRLIREMALPRITARRLMPPSLRALLGINHVTADSPETSRLN TRCAA" gene 443342..443755 /locus_tag="RTM1035_02120" CDS 443342..443755 /locus_tag="RTM1035_02120" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02120" /translation="MFQAALADGLGFEIFPLMQDGFLADKVDVDGCDVVWHHVIALAL FLSPNRRFELGEGALQTLFQAGGTPAEHALPVSGLELTRHWQLARAYDGQIVLWQSWR RRTGAKALWRSTLRSHTVMLSCLRRSPGPQRARKA" gene 443816..445693 /locus_tag="RTM1035_02125" CDS 443816..445693 /locus_tag="RTM1035_02125" /note="COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system" /codon_start=1 /transl_table=11 /product="probable two-component sensor histidine kinase protein" /protein_id="jcventer:1101493006646_RTM1035_02125" /db_xref="CDD:33926" /translation="MVQGIAQAAQMRRHSGFLVWLVLGLIVLWGGGALVHAQATRVFL NEAAGRAEGTLQLATTALDGYLERFERLPPLLARQQPILDLAEAPDDPARVDAANRFL RDVTGVLGASDIYFMDTTGLTRAASNFDLPRSFVGGNFAFRPYFSDAVASGAGSFYAL GTTSRKRGYYFGAPVRNGDTLLGVVALKIDVESVEAAWSGADYHVIVTDPKGVVFLSS NPAWRFGMTRPLTSEGQDLLETTRRYADSPLFDIPLRAQTTAQGHVLWEISLSTLPGA QGQGEYLLASAAMPEADWTLTVMQNTAPARAQALTFTAGAVLALALIGMMVAVVRQRR ARLRDLLVMQATAKVQLEARVAERTRELADVNEALGAEVAERRLVEVNLRRAQDDLVQ AAKLAALGQMSAALGHEVNQPLGALRNYAENAVALLTRDRKAETQTALERILDMADRI SAIARRLHTFGRRPGQQLGAVDVTEAIEAAQEIAGPRLRQVGATLSVDIAPGLSLVRA GPVRLQQVLVNLLTNAADAVADRAERRILLTARDEAEAVVLRVEDSGTGVPPDIALRI FDPFFSTKGVGNGLGLGLSITYNIIKDFDGAIALVPGTLGGAAFEVRLMSAPKQDLAA E" gene 445690..447066 /locus_tag="RTM1035_02130" CDS 445690..447066 /locus_tag="RTM1035_02130" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="putative two-component response regulator protein" /protein_id="jcventer:1101493006646_RTM1035_02130" /db_xref="CDD:32386" /translation="MSLPVFIPRVLIVDDDADLRASTVQALEIAGAAVQDLSSAERAL DFISFGFPGVVLSDIRMPGMDGLTLMSRIHEIDREIPVILMTGHGDVQLAVRAMREGA HDFIEKPFSASQMTELVARALSFRRLVLENRVLRAAVGQADDLEQRLIGRSNAMIDLR RRIRTIGPAETDVLIVGETGAGKEVVARALHDLSPRARRPFVVIDCAAIPAPLIESEL FGHEQGAFAGAMRARTGKFEHASGGTVLLDDIAALPPPLQGKLLRVVEDRVVTRLGSN EAYTLDIRIIATARVPLIGEVDAGRFRADLLYRLNVVTLDVPPLADRREDIALLFLRL LAEAAARHRVDTVPEVPPALLANIAAREWPGNVRELRNAADRFALGLGLQTDDEKTPA PQRLADRVAAFERREIEAVLAANGGSLKPVYEALGLSRKSLYEKIQKLGIDKTAFILD AEGRDQDG" gene 447367..448245 /locus_tag="RTM1035_02135" CDS 447367..448245 /locus_tag="RTM1035_02135" /note="COG2358 TRAP-type uncharacterized transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP transporter solute receptor, TAXI family protein" /protein_id="jcventer:1101493006646_RTM1035_02135" /db_xref="CDD:32505" /translation="MTIGTASQGGTYFVYGNGFASYIAETLGVAATGEVTGGPVQNVT LVETGDHLMGLVTMGPAYDAWNGKSELAPGLEHKSIRALFPMYQTPFQVIALKSSGIN SVSDLAGKRVSVGPAGGTPGTYWPLFMQALDVEATISNAGASDAAGQLQDGLIDAFAF AAGMPISAFAELAASQDVVMFGLSEEELPKVLAAYPAMAPLTIPAGTYAGHDYDQPTV ALWNFAIAHQDMPESLAYEITKLAMGNSDRMIQIHAAAKETLSENWDKNTFMPFHPGA VRYFEEIGITIPDTLR" gene 448309..450567 /locus_tag="RTM1035_02140" CDS 448309..450567 /locus_tag="RTM1035_02140" /note="COG4666 TRAP-type uncharacterized transport system, fused permease components" /codon_start=1 /transl_table=11 /product="TRAP transporter, 4TM/12TM fusion protein" /protein_id="jcventer:1101493006646_RTM1035_02140" /db_xref="CDD:34284" /translation="MGWTSCQRQFFMTTQTEKAQQDTAAQNQASIADGVDAEIYTSNQ RKPVGLAAKIAVILCIAYTLFHVGVMNGLHDRLTDLLGIGSVDLTEPWRYRLIHVGGG LALGFLLFSSTLFSEERSGTADPRRLLAVLPGAALVALAFGQAALFWTTGMAVDQAAA ANAYSMTFGLPLVVGTFWLIVVGWFWPDRRRATFDIADLFLALAAITVAMYLIYHAPF LRLRGGTALAKSADMYAALAGTVLILELARRLAGLALVIIASIFVLYAFVGPWLPGIL EHRGYSMTRFFSYVYTDQGILGPTTAISSTYIILFVAFAAFLQASRVGEYFVNFAFAV AGGARGGPAKVAVFSSGLMGMINGTSAGNVVATGSLTIPLMKRVGYKPQTAASVEAAA SSGGQILPPIMGAGAFIMSEITGIPYAEIVTAAIIPAMLYFASIYFNVDLAAQKFGMK GLPRSELPRFDKLARQAFLFLPIFILIGALFMGYSVIRAGTLGMASAAVVSWLTPYPM GPRQILFAFEIAAKMTLQLVAVCAAAGVIVGVIALTGIGTRFSSMLLGLADQNQAIAL FFAMIVSIILGMGMPTTAAYAVAASVIGPGLVQLGIPPLTAHFFIFYYAVMSAITPPV ALAAYAGAAIAQSDPMKTSVESFRIGLAAFVVPFMFFSSPALLMEGSWFEIIHVVISA LFGIYLLSSAVQGWFFGLLSMPLRAVLLIAALSMIAQGWFTDAIGLSVAIGVWLVQKR FVDPNKVIRGAD" gene 450674..451741 /locus_tag="RTM1035_02145" CDS 450674..451741 /locus_tag="RTM1035_02145" /note="COG2008 Threonine aldolase" /codon_start=1 /transl_table=11 /product="Threonine aldolase" /protein_id="jcventer:1101493006646_RTM1035_02145" /db_xref="CDD:32191" /translation="MYRQNLFTEMAGSMHDFYSDTQSRPTRAMREAALDTPLGDERHD ADPSTLELCARVADMLGMEAAVFLPSGTMCNEIAIAVHTSPGDEVICTRESHIIFAES GGPAALSGVMMHPIDGKRGMLTQEQLSDAIRPRSAHAPRSRLLVAEQTANLAGGAIWP LDQLNTVASAAKAAGLATHLDGARLLNAQVATGIPARDFARGFDSAWIAFTKGLGCPV GAVLAGSRGFVEEAWLLKRRWGGAMRQTGVLTAMCLYALDHHVERLAEDHLLAQSIAA RLADLPIIASVMPVETNIVIADLDPQAPDARETSRLLREKNVTVTVVGNRRIRMVTHL DVGPMDADALISALGAISRGR" gene complement(452129..452794) /locus_tag="RTM1035_02150" CDS complement(452129..452794) /locus_tag="RTM1035_02150" /note="COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, LuxR" /protein_id="jcventer:1101493006646_RTM1035_02150" /db_xref="CDD:32379" /translation="MSAEGLENREENTMNNQEEPTLSILVVDDHKLVSEAVANFLSSS SDFNVALCNSFQEAESFIKENGPIDVVLLDLVMPDMKGMDSIASIIKLNEPGAVVLFS GTANPHDLNAALELGCMGLIPKSLPLKSLESAIRLVSTGEVFVRASQNEPSAKGSTES FTERDLLVLSKIAEGKTNKEIAWMIQVSEVSVKSYVRKICMILGATNRASAAVRAKQL GII" gene 453614..453790 /locus_tag="RTM1035_02155" CDS 453614..453790 /locus_tag="RTM1035_02155" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02155" /translation="MMHRCGKRRVSMVMPRAFAPMVPNCTSFDPKVIYLKAAPCVIIR VGVTHSVLEDDCDE" gene complement(453894..453959) /locus_tag="RTM1035_02160" CDS complement(453894..453959) /locus_tag="RTM1035_02160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02160" /translation="MLCVTFAKLAFMKEPLLKFLI" gene 453987..454403 /locus_tag="RTM1035_02165" CDS 453987..454403 /locus_tag="RTM1035_02165" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02165" /translation="MAPEGAFVTRQVLFFAQPCFNTQNVERWLEGMFDLRVMVPRNTT FYHEWLFRYATEAGLIIIDKDSFGGEQSSFQRFAKIAREMCEEVPMIVLSRDFRVNDF DLSWSDNWDVSLQSPVSQHTLGLAIEVASDIAINGR" gene 454880..455095 /locus_tag="RTM1035_02170" CDS 454880..455095 /locus_tag="RTM1035_02170" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02170" /translation="MSDHVKLSYDEYQKFSLGLENLLKTIIKIDEIVLPRSIDETALN EMDGLVIHLREEAKTLLQDFNAKRHVR" gene 455884..456525 /locus_tag="RTM1035_02175" CDS 455884..456525 /locus_tag="RTM1035_02175" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02175" /translation="MIKLELLRTGALAGLAACAPILALANGYLENRPWQFQTTTDRAN KAVVLDLIERKKGGFYDGFTTNIHNETNIGSQINCNNNANATGNIADNGQAGPNTESN GTPSISAEGIGNTDSGTAADDPSSSGSTTQTSDQTNSGEVVATIGNSSIENSFGDVAN GVTDQALNNTQDNSGSQTAGVDGSTACNMEGSSVTGTVNRLLKKSALDAVMRT" gene 456563..457741 /locus_tag="RTM1035_02180" CDS 456563..457741 /locus_tag="RTM1035_02180" /note="COG3666 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase, IS4" /protein_id="jcventer:1101493006646_RTM1035_02180" /db_xref="CDD:33464" /translation="MRGTDEASGSLFSYVDLEQRVPDRHPLRLIRRVVNDALASLDAE FAALYTDFGRPSIAPERLIRASLLQLLFSIRSERQLMEQMNYNLLFRWFVGLGIDDPV WVPTVFTKNRDRLLTTDMSRKLMAAILAHPEVRPLLSDEHFSVDGTLVKAWASMKSFQ PRNSAPPPHDDDPGGPPPPADATFANTEPQPQQTETQPMPDTPRHIRNAAVNFRGQKR SNATHISVTDPDARLYKKAPGAAATLCFMGHTLMENRNGLIVQADLTHADGYGERKAA LEMINRHSPGSTRRLTLGADKGYDSANFVAALRRMVVTPHVAQKARSSAIDGRTTQHP GYALSQRRRKKIEEPFGWAKTVGGMAQTVHRGLDRVRAQFTMTMAACNLARLPKLLAP " gene complement(457750..458208) /locus_tag="RTM1035_02185" CDS complement(457750..458208) /locus_tag="RTM1035_02185" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02185" /translation="MPKNKNQTPNHSRESSNAILGWFHVAPSPLAAIFTVIVIGVMCA LGAFIIFEYRSLQVQSHGRVGSAYIDNLLAPLALSHFESLGNSGRGSDQAFSYVAEKN PNLVMRVWALDGALLYSTLNRLLKKSALKDVILPPRFEGGSLRLRTPGRV" gene 458633..467770 /locus_tag="RTM1035_02190" CDS 458633..467770 /locus_tag="RTM1035_02190" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="Animal haem peroxidase" /protein_id="jcventer:1101493006646_RTM1035_02190" /db_xref="CDD:43031" /translation="MAVKLNIADLEFFLRQVKISEAHASGTPLTEIYVDADGNVVPEG TPGAVLAIPEALVPNGLRTVDGRYNNLIEGRETWGAADTPMPRLLSQTFLNDQDGDEM PLGAPGGPLVTNTDYGVIGTPSGTNGGHTGNVADADPRIISNLVVDQSTANPAVVEAW FANDAALAAFHERYGEDAIPIRPGEGPEALELLNTSFEDQPLLDGAPGVTSNPLGNFT TTAPSDWTITGGSGGLFAPVDSVSSTAGHPGPNVAWLTGGATLSQDSGTLTEGASYQL SLSVGDRTDQVWSGGTARLVAVGAGGVTTVISSVTLPEPADGQWADLTLNSGPISAGL AGQTLRVEIQQTGGSQVLVDNVALSTSNGNEIEIDNIDLATIPNIAPDDGISAPFNAW MTFFGQFFDHGLDLITKGDNGTVFIPLQADDPLVLGADGIAGTADDLPNHLRFMALTR STPVDGPGADGVLGTADDTQHEGQNTTTPFVDQNQTYTSHASHQVFLREYAFDTNGNP VSTGKLLDGANGGIPTWAEVKAQARDLLGIELTDGDVLNIPLLRTDDYGEFIRGPNGL PQIVVGIGADGIPNTADDDVVEGNLAAPVNTFTAGAIRIGHAFLDDIAHAANPFDSQS GMLKTADDDTAVGLSDSVSTAGTYDNELLDRHFVTGDGRGNENIGLTAVHHVFHSEHN RQVVAQKKTILESGDIDFINEWLLVDLAAGDPIPTDPTALTWDGERLFQAGRFATEMQ YQHLVFEEFGRKIHPNIDPFVFNAVTDINPSIFAEFANVVYRFGHSMLTENMPRVLVN ELTGEVTTDNMGLIAAFLNPVAYDNDGAMSADAAAAAVILGMTTEQGSQIDEFIVPAL RSNLLGLPLDLAAINIARGRDTGIPSFNDARAELFQQTNSVWLKPYENWVELAANLKT PMTIVNLLAAYGTHSTILAANTLEEKRDAAFDLVFGGGGVSDADRFDFLLGRNGWTSD TNGLNTIDLWVGGLAERIMPFGGMLGSTFTAIFEAQMEALQDGDRFYYLTRTQGQNFL NELEENSFSKMLLANTSLADPGADGIRGTEDDVVRHHIGVDSFARYDFVLEVNQANQL IDDPVGNDPVLEGLGMGKVVRDDPTTSEVETNYIRVTGGEHLAVGGTNGNDTIITSDG DDGIWGDDGDDFIESGFGVDLVNGGGGNDIILDSGDEGDFLKGEGGDDVMASANGLDV LMGGTGKDVIFLGVDSSEVFGGSGDDFIMGGAGADFLLGNEGDDWMEADGGFDTTAGD NSELFFNSKIIGHDVMFAGSDEHDFDAESGDDIMVQGESVMRNEGMFGFDWVSYKGVA IDAYADMRIKIFTTDEEDILRNRFDKVEGLSGWQMNDTLIGDDRVAPGTGEGAEAELF NDGLDQAGIDRIDGLSDLVTLLNGEEFWENGNIIMGGGGSDLITGNGGDDIIDGDRWL NVRIRITGDPTDENTAANEIATVDTLRHIFTEEDGVDPAWVGQSLFELLVSRTIVPAQ MNIVREILDGGQEDDIDIAVFSDNRDQYTITNLGNDVFQVEHTGFGTNPAILIDDGID TLHNIELLRFADGDFALPRPATGMPVINDPTPTNGQVSPVEGQLLTVDTSGIADVNGL GAFSFQWQFLDGAVWTDIPGATDATFTPNDPNFIQQLLGDISEIGRQLRVEVSFTDGV GTLETVYSEPTLAVAENTGVTLNGTTFSNNSLNGSAGNDLLTGVSPFFGVGGNDTLNG NGGDDILNGQAGNDVLNGGAGFDQLDGGGGADVLNGGADDDIIIAGGGTDTIIQASTD GRDVVDGGTGNDTFRVQGNAEAETFTVYAMSGGQNAGLAASLGTSFLASTEIVITRTV GTTTTVVAELDNIEEIAVDTLAVSANDGNGVPNGGVVGGDTVAIVGNFVPTSLNFSTI TVNGTAADDTIDISALTSAHRIVFRGEGGNDTIIGTLRPQDVIELPGIGDPVVTVNED GMVTVSRGGSSVTFDGSSGLPGIGGGTTSDDDVADGSFSLSARDLEGLKNLVNGELAF DGDDDTEEATGVRTLSGEGNNEANPAYGAAGEPFIRLTEARYGDPDENGNRQINPIFD GLDPRAISNILGPHDDTTAPNAMNASALFMAFGQYFDHGLDFIAKNPAFGTIEIGGPG AERSPTSDNPADLTRAEVAGYDEDGVPQHTNMTSPFVDQNQAYGSHELVGQFLRESDG AHGFGMRLLGGEADPSDPAFTLLPTLRDLILHHWEAETYFEDPGLPGGAARLQDVFPD LVDEITGEIDPDMVQALASDFLGSGQPLLLDANPFIDLLDHRMAGDGRANENFALTSV HTVWARNHNFHVENMLAQGFEGSDEEIFQAAKMLNESDYQRVVFQEFADKLLGGLRNA DGDREDHGWDGYNPDVDARISHEFAAAAYRFGHSLVGENLQVQGPNGELIQVPLYDAF LNPSNDPSVFNGPLPQGYVPAPGYAQYGVAAIIGGTAVQAAEEVDLKIVEAIRSDLVR INADLFSFNVARGWDVGLGTMNQVRTQLAASTDPYVSQAVDMAGDLSPYSSWADFQAR NDVSDEDMARLMEAYPDLVLETPAQIAAFVAVNPDVVLEDGANGAKIVKGIDRVDLWT GGLAEKHVNGGMVGQTFWVVLHEQLDRLQEGDRFYYIDRFDNFDFYQEFGEDTTFASI VARNTSLTDIDNNLFDANGIDDDDDNATEDDNATEDDNATEDDDDTAGGDDDNATDGD DDTAGGDEDNATDGDDDTADGDEDTASDDQDDTAGDNDTEGDEDDDEPEDNDSNVTPP LAASGNVIGTAAADALFGGAEGDNILALAGRDMIFAGDGDDNVLAGSGRDMIFGDGGN DRLFGEGGDDFIEGGAGNDFVVGGAGADLFVATMNDGDDVYYGDDVTGGSGSDTLDMS QITADTSVDLGSASGGRGYASSAQSGNDVLWSIESFIGGAGNDTITAGSAQNEMDGGV GNDVYRFLSASDADGDTISSFEPGDKIDLSQIDANGSGPGKGTFTLVSEAFSGGGQIL VTHETGANGDVTVIQGNIEGDNGPDFSISIRGRHDLTQDDFQL" gene 467860..469656 /locus_tag="RTM1035_02195" CDS 467860..469656 /locus_tag="RTM1035_02195" /note="COG4618 ABC-type protease/lipase transport system, ATPase and permease components" /codon_start=1 /transl_table=11 /product="Type I secretion system ATPase, PrtD" /protein_id="jcventer:1101493006646_RTM1035_02195" /db_xref="CDD:34241" /translation="MANQKNTSGNAAAKALGSIKGLIVFLLLLSGVINILALTGAFYM LQIYDRALVSGSIPTLVAISFLAIGLYLFQGVFDVIRTQILIRVGARLDRRLAPVAHQ LVVDMPRLGYSTSEALERGRDVDTLRGFFGSQGPIALFDLPWMPIFLAFVYFLHPMLG ALTIGGAFTLATLAIAAELRTRSWSSSTVSATIERNAIADSNARNAEVLKAMGFASRA VARFSAANDRHLELQTRTSDISGTYSAISRVLRMLLQSSILGLAAYLTIRGELSAGAI IAATIASARAMAPIDLAIGNAKNMESARTSWRRLRNTVEVLENQPKPMWLPGPKYNLK VEGMTVAAPATGRVLLSDITFEAAAGQAVGFIGPSGGGKTTLARALTGIWPPLRGSVR LDSAELTQWSDDDRGAHIGYMPQDVALLDATVEENIARLAETPDPEAIVAAARAANVH EMLVRLPDGYRTYLGPMGTSISGGQRQRLGLARALYKSPFLVVLDEPNAHLDPEGEAA LTAAIEGVKKRGGIVVLIAHRPSALQACDLIGVIQAGKLTAFGPREQILNPKPVSVAS ATKPSVASERHSTETPVECHMLDEGRKAKKGG" gene 469659..473642 /locus_tag="RTM1035_02200" CDS 469659..473642 /locus_tag="RTM1035_02200" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="RTX toxins and related Ca2+-binding proteins-like" /protein_id="jcventer:1101493006646_RTM1035_02200" /db_xref="CDD:32755" /translation="MIDVKSFRSATTAQSDPADPLGLEHPERSQTKLLSGWFAGLLGL GLYLRSFLWSDQHVAAVAEDEPPEEDSKDITESRNTSGLALHENAPDDSVGGPGDSWV EEGPTIVSFRYPVVLGRFESMFIEPLPDLVFGTEITRVTANTILPPFNLFPGINKFPQ DNGVEPGSPPFIPDPSNETEPDDPPTVAEEENPDQNETDPEQDRNRGPRNSSAVYLGD LGSGAVLAISLAHLLSETKDHDGDLLGVSINGSTVGHMDPKGDGWLYFADTDALGEVQ IKYSITDGALSIDQTAILNVIENVFTGTDGEDLIVGTRGRDAIFGLNDDDNLAGFGGR DRIYGGAGDDNISGGDGDDSLFGNDGDDLIAGGDGDDWISGGAGDDRLFGEGGNDVIY GDAGHDEIYGGDGEDKIFGGTGDDTVKAGDGDDEVRGGADDDILHGDAGNDHLDGGRG KDQILGGTGDDTVMAGAGDDEAWGEDGDDLIHGDAGDDALDGGLGDDQIFGGTGDDTV VAGADDDAAWGEDGDDLIHGNAGDDVLDGGLGDDQILGGTGDDTVVAGAGDDEAWGED GDDLIHGDAGDDVLEGGVGDDQIFGGTGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDV LDGGAGDDEILGGIGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDVLDAGLGDDEILGG IGDDTVVAGAGDDEAWGEDGDDLIHGDAGDDALDGGAGDDQILGGTGDDTVVAGAGDD DVQGEDGDDLIHGDAGDDVLDGGAGDDQIFGGTGDDTVVAGAGDDEAWGEDGDDLIHG NAGDDALDGGAGDDQILGGTGDDTVVAGAGEDEAWGEDGDDLIHGNAGDDALDGGLGD DQIFGGTGDDTVVAGAGDDQAWGEDGDDLIHGDAGDDALDGGLGDDQIFGGTGDDTVV AGAGDDQAWGEDGDDLIHGDAGDDALDGGLGDDQIFGGTGDDTVVAGAGDDEAWGEDG DDLIHGNAGDDVLDGGAGDDQILGGTGDDTVVAGAGDDDVQGEDGDDLIHGNAGDDVL DGGVGDDEILGGTGDDALSGGTGDDQLAGDSGDDVIFSDEGDDISHGGAGNDVLFGGD GDDLLDGGDDDDIVSGDAGQDSLYGGDGNDILSGGADEDTVLGGAGDDIVVADDDSAS DTYSGDAGHDQLNYSGATDGVELDLITGMASGESIGDDSFSGFEDYVGSTGDDHFRAG SGQASLTGNGGSDLYNFVQGDTVDIIRSVYQINDFNSDDRIWIGSGSSHREIRKAQKS LEERIEDDLDDYADALDVDEPRLTYYHDWTDDYRRTVVEVDFNRDRIIDLELRIEGDH ILLIEHA" gene 473668..474993 /locus_tag="RTM1035_02205" CDS 473668..474993 /locus_tag="RTM1035_02205" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="Type I secretion membrane fusion protein, HlyD" /protein_id="jcventer:1101493006646_RTM1035_02205" /db_xref="CDD:40616" /translation="MTKSGSVKNAPQSPAAFDRLRGRIILGVLMMFGLLGGVGAWAFN ANLTGAVIALGTVKVDQNLKQVQHRDGGIVEKISVREGDEVEAGQVMFRLDDAQSRAE LSILSAQLDEAEVRRARLVADREGAAEVRFPKRLSMSDPQQSELMSGELRLHAGNIVN RDNQREQLELGIAQVNDEIVALVSQRSALTDELALVEESHSRVVNLFEKGLIQMPRVD EAKRELVQMRGKLGELDANIARSRSRISEIEMRILSVDEVARNEAQRELTVVEARIQE LSDRLTAVQDKLSRTEIRAPISGRINELSVFTEGGVITPAEILATIVPASAELRIEVQ LPTTAIDQVYLDQTARVRFSSFNHRTTPEILGTISHISPATTISASTGEPFYIGYVDI SPEEFARLNGLALMPGMPTEVYLSTQEQTAAAYFARPLMDQFEKAFREE" gene complement(475977..476522) /locus_tag="RTM1035_02210" CDS complement(475977..476522) /locus_tag="RTM1035_02210" /note="COG4681 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02210" /db_xref="CDD:47036" /translation="MAQNATIYKIELSVSDMDRHYYETHKLTVAKHPSETDERLMVRI VAFALNAHEHLEMTKGLSTDDEPDIWQKSLSGEINLCVALGLPSEKVMRQSCNKAAKV IVYPYGGRIAEMWWDKVKNGTTRFDNLRVVNFSEADTATLAKLANRAMKLQVNIQDGD VMVSVDESVVYVTPDTWKDVT" gene complement(476984..478132) /locus_tag="RTM1035_02215" CDS complement(476984..478132) /locus_tag="RTM1035_02215" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="probable MFS transporter" /protein_id="jcventer:1101493006646_RTM1035_02215" /translation="MELTAQDRRLSLGAVMLHMLGIGLTLGLTFPLTSLTLEAWGSAA WVVGLAGAMAPLAILLFMPVLPSVAQKLGAVRAMILGCGIGIAGLVVMYLVQTAPVWV AMRFVIGAGLALPWLAGDIWVNSVAQEESRGRVIAAYVACLFIGFSAGPLLLDYTGIT GIAPFAMGCGALALAVLPLIAVGRLAPTIVAEQGSGVLSAARAVPVMAVGAFVAGFTE ALIFSLLTLWGLETGLDETGALRLLTTCIIGGVVLQFAVGIMADRIGRQRLLGLIGLA LIAIGALLQLSTGGLVFVAAFITGGLILALYGLSLILLGERFSPAQLAAASAAFLILY QLGSVTGPLVAGAAMDLGGAAGFVFSLSGAGLAIALVAFTTRTRTKEI" gene complement(478123..478806) /locus_tag="RTM1035_02220" CDS complement(478123..478806) /locus_tag="RTM1035_02220" /note="COG1182 Acyl carrier protein phosphodiesterase" /codon_start=1 /transl_table=11 /product="(Acyl-carrier protein) phosphodiesterase" /protein_id="jcventer:1101493006646_RTM1035_02220" /db_xref="CDD:31375" /translation="MKGAIGEGDQETKEKSMKILHIDASARTEGSYSRRLSSHFIDCL HENGLAITVDRLDLAVHALRHFGALETAAITLPEAEHSAEMRQAIAPSDALVARVLAA DGIVIGTPIYNFGMPSTLKAFFDHVSRNGKTFLADGTGMRGLLGDTRVAVLSATGGTY GPGDVFDGLDCLTPHIRAILGFLGVTDLSFVAAQSMMFAGPDAAAMSLDAAKTEAASL AKTWSTAWN" gene 478837..479181 /locus_tag="RTM1035_02225" CDS 478837..479181 /locus_tag="RTM1035_02225" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02225" /translation="MTADRLQTHQENPMSNAIIESVTFKLNEGVSHDAFLAAAKGMNA WVVACPGFVHRRLSCTEDGTWIEHIQWQDMPSAKAAAAEIGKVPGNADFLSAIDGKTV QLMHSELAVAIN" gene 479186..479890 /locus_tag="RTM1035_02230" CDS 479186..479890 /locus_tag="RTM1035_02230" /note="COG2378 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="Helix-turn-helix, type 11" /protein_id="jcventer:1101493006646_RTM1035_02230" /db_xref="CDD:32525" /translation="MLERGRRLADIVEIVRDGRLHLARDIADALEVSVRTVYRDIGTL VAAGVPLDGERGVGYILREPVFLPPMSLSLVELEALSLGMAIVQEAADAELQVAAAGV MAKIGEHASNRRQAPKSWGFGVYAFEKAREGFRHMPLIRRAIREGLKLRIDYRSLDDQ MTSRVIRPLQTEYWGRVWTCSAWCELRDGFRAFRIDRMQVCEVTGRGFKPEVGKTIED YLTHVANQMDRDRDRS" gene 479850..480356 /locus_tag="RTM1035_02235" CDS 479850..480356 /locus_tag="RTM1035_02235" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02235" /translation="MSQTKWIEIETVHSFITNELDGVVPKDAWGETSYFYNPGHVFQR GTYFATIKQKDGANDRASQLDRSGVWRLNLGVSKEVFFELFGPPPPRPGKGGVIDGGW DFAASDQLMPHPIYGWMSWISVLNPSRLTWGKCLPLVSDAHLRAKGTFEQRRAKQNGL ARRIAAKS" gene complement(481537..482562) /locus_tag="RTM1035_02240" CDS complement(481537..482562) /locus_tag="RTM1035_02240" /note="COG0270 Site-specific DNA methylase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02240" /db_xref="CDD:30619" /translation="MEVYGRSLPVRKKIADSLATIVDYSVNQMGDTAAFDYPPEIIQH DLATEVGKTDLLIAGPPCQGHSNLNNHTRRNDPRNDLFVATAAIAVALEAKAVVIENV PGVVRSHSDVVELARRLLASEGYAVADRVLRMDDLGGWQTRARYFMIAVKDAEQEILQ ETLSQLATEDSGACFGKRDPRDVLWAIADLGDSGGNSVFDTSPVQGPENIRRIDFLFD EGIYDLPNSERPDCHKDGTTYTSVYGRMHPDRPAPTITTGIGTPGQGRFIHPTRRRLV TPHEAARIQSFPDGYGFMGGDGEPPRKALAKWIGDAVPPYLGMSAVCAALSVLTGAAP KVPWEVR" gene 482590..482724 /locus_tag="RTM1035_02245" CDS 482590..482724 /locus_tag="RTM1035_02245" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02245" /translation="MENRTAIEATGCKGCSQSEATGTAEQIDNRQWLLGGIIPKMISP " gene complement(482827..483630) /locus_tag="RTM1035_02250" CDS complement(482827..483630) /locus_tag="RTM1035_02250" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02250" /translation="MPYPIVSEESAKDWFKKWQDACEEASARVSPIEAPKVEKQPIGD EFDWEMEIQAIVDSLAALLEKEGEKAFESKGAVMLHKALPDHEALRDPEFWYWFATVP GRTLVENRYPFKENAQVDLELEDNERKAPNYLPGRNNFVGQHAKEVLFFRLWIRAEMG RLVDGADDTSKVYEYARGGSVEFWRSHLLRVLYAQHRPFLQAFVDFQFPGPDRDKPRL TIPEIRQLAKDLAKACANVSVELLDINQSKALIERVWTRTSSVRAWVKD" gene complement(483630..484544) /locus_tag="RTM1035_02255" CDS complement(483630..484544) /locus_tag="RTM1035_02255" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02255" /translation="MNAWVRSQPKTLRPYFGAQAAEGLLDEMELFLKFGDAPVQGNRL IVDDSQMADMAPRLYPKLSEERINAVFGERRAAFDLIVTLRTPQMLRRELIDRFSLGD EAPECIEVPKHMLKDAKLTGLFELGISICLAEEIDLGAGWPSHLGSWVTKEVYTIGLD RRQSTFRILPLTEELAKSLHLPKGTFVYVDDIEDLNTVYDEGTSCATAYVSEKVLLSS ASGKSAAAVAALIWSEIASAILLADGNGVSEAEEVTGGSPLEAILENLRADQSLSLSE LKNLIKDPVRLRAAVHDSRGLVKDLEKV" gene complement(484541..486328) /locus_tag="RTM1035_02260" CDS complement(484541..486328) /locus_tag="RTM1035_02260" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02260" /db_xref="CDD:31258" /translation="MVERNWFYKRVDPDGGAGGEVFKSIFNGSGLDAAERLAREALQN SVDAAREGETPQVSLQMNAYSDADLDRFWHGAGLDAFAARVGVLGLHSENAFETKPET LRVLHVVDSGTTGLAGDPTSPSSKMRKLLMEIGGSQKVVEDKNSGGSYGFGKAVYSAS SRVAVIFAYSRTHDASGQPLSVLMGCAYHREHEFDGQTTSGRAFFGKRIEEHGIPIRH DPFVGDEADELAAELNMSREEGDIGTTIAIVDCPLKMEDIKRGVERSWWPKIRRENFR VNITDEDGQRLHLRPLQDPELRPFIDALDVALGRSPEQRGKSRRKADFNKLDGKKIGQ LGLFAWADEQEVDEMSDQIDRRDTIALVRSPGMVVQYYRRGFPSHPPVVGVFLADDDI DDILRRSEPPEHDQWDANADRLDPSSKESEIVQSVHSRIWRELRTFQKFARPPEKSDG NRFLQLERELAKLFGPTGKREPIGGGKVETPVSLRPDVLIEQAADGLKVKGRVTIQLK EDHEGDLPVVVTMQLSSIDEGHRHLDPIALTASFNGADVEKVDEAEWHLTLSPGEKVE VELESAVYEPDWTVDFVPRVKPLVTEVKQ" gene complement(486377..486601) /locus_tag="RTM1035_02265" CDS complement(486377..486601) /locus_tag="RTM1035_02265" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02265" /translation="MDTAKHEKFRQLAESRTNKAIEAISRIGNLSNRSLYEWEEAELR KVIKALRDSVSEVEQRFATPKSRTGGSFKL" gene 486866..487213 /locus_tag="RTM1035_02270" CDS 486866..487213 /locus_tag="RTM1035_02270" /note="COG3727 DNA G:T-mismatch repair endonuclease" /codon_start=1 /transl_table=11 /product="very short patch repair protein (DNA mismatch endonuclease)" /protein_id="jcventer:1101493006646_RTM1035_02270" /db_xref="CDD:29956" /translation="MTDTVTSEVRSKIMARVRSKDSKAEVTLRKALHARGFRCLVNRR GLPGTPDLVFPRRRAVLFVHVCFWYRHDECRKATTPATNEAFWTEKFKRNIERDARKI AELEALGWRVEVV" gene complement(487430..487501) /locus_tag="RTM1035_02275" CDS complement(487430..487501) /locus_tag="RTM1035_02275" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02275" /translation="MVDNIEINFESEIVLVLQSVTCV" gene 487582..487860 /locus_tag="RTM1035_02280" CDS 487582..487860 /locus_tag="RTM1035_02280" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Transposase and inactivated derivative" /protein_id="jcventer:1101493006646_RTM1035_02280" /db_xref="CDD:41572" /translation="MAGKREKPEEIVSKLRQVEVLQGQGATIAEAVRQIGVTQQTFYR WRKLYGGMGRSQLARLKELEKENQRLRRAVSDLTLDKLILTEAAKGNF" gene 487968..488708 /locus_tag="RTM1035_02285" CDS 487968..488708 /locus_tag="RTM1035_02285" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Integrase, catalytic region" /protein_id="jcventer:1101493006646_RTM1035_02285" /db_xref="CDD:40748" /translation="MPQGRADEQRLTDDIIELADQYGRYGYRMVTGLLNNAGWCVNHK RVERIWRREGLKVPQKQKRKGRLWLNDGSCVRLRPERPNHVWSYDFVQDRTADGRVYR TLNIIDEYTREALMIRVDRKLNSTDVLDALTDLFILRGPPEYIRSDNGPEFIAQKVRD WIAAVGAKTAYIEPGSPWENGYCESFNARFRDELLNGEIFYSLKEAQILIEQWRVHYN TVRPHSALGYRPPAPESIVPLDQRPTMH" gene 488994..490076 /locus_tag="RTM1035_02290" CDS 488994..490076 /locus_tag="RTM1035_02290" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02290" /translation="MLLPDLETVPKWVGHRSLGALLIDKELHDREAHATEHKILNDLQ SGKRVSIQRVETLFSAIIGKWCQNDDLHRSRLHKTHRRLQKGEKHYVQVDFNREGAQL LWSYLAKYLPKTHAKTRKLLDELILISTELHRDYRGNGSQTVAPTLSRFGESPLAGVA QSQFLAEMTMLMKEGNEEVARVELSAFGALLLSAEYFHDSETSVEAFCDSLTKLFVAH QGRVNPLRSFSNWLERLEARTGYAKDQLLLDGFVHPVCKTETLLERDPRNLIRNARRY RNGDLVPTFHKTQECLRSLRPELEEGQLDKWKAELDSREFGLMFVLLVANSARSIKKF GGVPERPCQAVYDLFAKGGGTCHPHG" gene complement(490096..490254) /locus_tag="RTM1035_02295" CDS complement(490096..490254) /locus_tag="RTM1035_02295" /codon_start=1 /transl_table=11 /product="putative orphan protein" /protein_id="jcventer:1101493006646_RTM1035_02295" /translation="MAKHDDDNRANQMNPNNDAYWDSREYDGRPDDWEDRLEDGDSHD YTPLTSTH" gene 490607..491050 /locus_tag="RTM1035_02300" CDS 490607..491050 /locus_tag="RTM1035_02300" /note="COG3666 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Transposase and inactivated derivative" /protein_id="jcventer:1101493006646_RTM1035_02300" /db_xref="CDD:33464" /translation="MLGTQKVHARLFYEFNLETHIPADHLLRGINRFLDLDGLHEEMR SFYSHTGRPSIDPKLMIRMLVVGYVMGLRSERRLCQEVHLNLAYRWFCRLGLEDKVPD HRAFRSPGTASFATAMSFASSSSAWWPSASPVVWSAARALRSMRA" gene 490987..491466 /locus_tag="RTM1035_02305" CDS 490987..491466 /locus_tag="RTM1035_02305" /codon_start=1 /transl_table=11 /product="Transposase and inactivated derivative" /protein_id="jcventer:1101493006646_RTM1035_02305" /translation="MAQCIARGLVGGKGFAVDARLISADVQKKSSSRQDKWDATTIDP NDAPRAVREYLDTLDEEAYSAATPVKPKFTAHADPASQWTAARKGPAFFAYSDNYLID TDHGIIMDVEATRSVRQAEVGANLTMLDRTANTSTCVPTGWLPTQLMGPRRAWSSSS" gene 491448..491993 /locus_tag="RTM1035_02310" CDS 491448..491993 /locus_tag="RTM1035_02310" /note="COG3666 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase, truncated" /protein_id="jcventer:1101493006646_RTM1035_02310" /translation="MVELVLKRQILPFIPVIDKGERTDGTLSRSDFSWDDENDRYICP EGKDLRHARRNYSDPDRISTEMKPRRYRATKADCQACTLKAQCCPNSDTRSLQRGKYE VVRDFARSCMASAFNETAQKRRKEVEMLFAHLKRILGLTRLRLRGTSGVKDEFTLAAT AQNLRKLAKLCPTTAPSAPIG" gene complement(492497..492682) /locus_tag="RTM1035_02315" CDS complement(492497..492682) /locus_tag="RTM1035_02315" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02315" /translation="MKNSYDLPCGVTQDHRETLKLGRNLGAESLAFPPGFLPAHSQNT AIAAYFAVQIMMIQQNL" gene 492733..494076 /locus_tag="RTM1035_02320" CDS 492733..494076 /locus_tag="RTM1035_02320" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02320" /translation="MNNVFELKTGQRRPASSYEAFAAKIKRAKALRASFDQRAVFSIE DQERVAANLHRILEHLNEDRGLPKRQIAQKSGLGGSGDVDSTKRLDPYTLPEGASESR VRRLAKKPGKYFEIAEAIARILEEPMEGYVCQIFEGCSFGTGREFEPDWEDEGWVRLA NLLRRMAAAVIRDEDMSRYWLDVVKLNGCYDIKTGHLHQSNTALDSVGCETGLAGWNS VPDELPPIPSVLIGQRLMMEPHEDILVLKGGRQIEAEFSLYLEARLALAPVNQDGLPG PMIEFRSRLDAFSETEGRIVFDNMHSDGSGGSDTIRSALINGVEVEIAEFPLLDVPEA EWREDSLEHVYFAWREVSSALLRSLFGEIERPFDITFREREVYVQEMPPSRFPHGSAG FYLNAYLLTGELEKDLAAACRDCADKVVLFRNSLGQRIDEVEAEAEMRWTRGPEA" gene 494024..495130 /locus_tag="RTM1035_02325" CDS 494024..495130 /locus_tag="RTM1035_02325" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02325" /translation="MKSRRKLKCAGRADRKREGKLMEQMLTLTHATERDIDLLLVEEF SASATFSSWFLEQLGLNVEGMGAVSVFHSTRRMHNRREIDISVDISTDAGRVLLLVEN KLDTNEQPDQAKSYRDEAELRTSEYHCVLTVLVCPEHYIASHHRFANAFDRVVTYESV CQHFRNRAQTAPGEIGARCLHRASLIEQAIGKSRRGYVQVVHPGKRAFSNHYVALLKE LGSTLIPGPSMKKDSGAESVTMIFAPKTLPKWPFLPQMRIVHQLREANANINFYTWGD HFPALAQAMAPALQGTDFRLVPTVNKRRGGRAGLMVVAETPKVYQFADFDQQREAIVQ GIKATEKLRDWLLEHRADVEVWSRTVAQMNNGHS" gene 495194..495412 /locus_tag="RTM1035_02330" CDS 495194..495412 /locus_tag="RTM1035_02330" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02330" /translation="MRLDHRVFTPKYIGLSMQLALAKARISVIDFEKRRRGPMQCVVE QHAITSFGGRVSYAYESKQLATKALSTS" gene complement(495496..497040) /locus_tag="RTM1035_02335" CDS complement(495496..497040) /locus_tag="RTM1035_02335" /note="COG1200 RecG-like helicase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02335" /translation="MGELESIKGLPGMIDAAADTLKKAWRAGIEPAARAPKHLRIDAI ASLEEAVLDELPPGMMRPADIVAAATDRIKHSPAVLGPIEIVGLTELSPCWRPLLGAL TAHVPVQWTAGPRSAPAWLEATGVNISRAPANVPGISAVSAATAYHEAVDAMRWVRSL LASGVLPSEIAIATASPTDYNDYFLALRADSNIDLHFVHGVRAITTRDGQAAAALADI VARGLSQSRLRRLATLCWDSGLLEALPKGWLSILPTDAPLSTPVAWDRLLKKLMQEQE SDGTDHAPELRVAVELLMKGSDAAEEIGEAFLKGRALTIWRKSLLAGSAATIDATIET LKQDDGLEACVSVAWMPASALAASPRRFVRLLGLNSSRWPRGIEEDRLIPEHIIPTDV LDPLPVNLADRRDFETILTTTDGEVCLSRARRDSDGRLLGRSPLLDGHGEEIYLRGNS VPEHSFSETDRLMARPQEFASDPQTVGARACWRDWQSPELTAHDGLIRADHPPHSGNP RPHSVG" gene complement(497244..497627) /locus_tag="RTM1035_02340" CDS complement(497244..497627) /locus_tag="RTM1035_02340" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit epsilon" /protein_id="jcventer:1101493006646_RTM1035_02340" /translation="MQFGWFFDGHRALADCEACLALMAQELPQSGQRVMSAVRDAALQ DEYLIRAVDAPYDERLKLKERGYRWRPAELPLGKVWWTITADPSAEIEWLRSEVYGRD ANVPEYKVTALNRFSERLWQEVTSK" gene complement(497661..498179) /locus_tag="RTM1035_02345" CDS complement(497661..498179) /locus_tag="RTM1035_02345" /note="COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit epsilon" /protein_id="jcventer:1101493006646_RTM1035_02345" /db_xref="CDD:31188" /translation="MNDYSLFAIDEKHVVQPAAHECEDDWRLLRRLALPRRLNNPHGG TVKHALVLDVETTGLSHEADEVIQLAMLPFTYELNTGRILEIDHDRGFEGLREPGVPI SEEANLVTGLTAETVAGQTINGAIVEALVADADLVIAHNSSFDRVMVEKLWPCFAEKP WGCTLTSIDWLR" gene complement(498270..498413) /locus_tag="RTM1035_02350" CDS complement(498270..498413) /locus_tag="RTM1035_02350" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="integrase, catalytic region" /protein_id="jcventer:1101493006646_RTM1035_02350" /translation="MQDLEMATLGWVDWFNNRRLLGPIGNIPPAEAEENFYAQRDVLD MVA" gene complement(498429..499175) /locus_tag="RTM1035_02355" CDS complement(498429..499175) /locus_tag="RTM1035_02355" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="integrase, catalytic region" /protein_id="jcventer:1101493006646_RTM1035_02355" /db_xref="CDD:40748" /translation="MIGFIEDQRVVYGVESICRVLPIAPSTDYHHLACQADPTKASTR HQRDMELRPEVKRIWDENYQVYGVRKAWHQLKREGFELARCTVERLMKQIGIRGAVRG KVVKTTVPDTSAPCPRDKVNRVFRAPAPNLLWISDFTYVSTWQGFVYVAFVIDTFADR IVGWRVSRSAKTDFVLNALEQALHDRRPVQKSGLVHHSDRGGQYLSIRYTERLAEAGI EPSVGSVGDSYDNALAETINGLYKTELVHR" gene complement(499172..499513) /locus_tag="RTM1035_02360" CDS complement(499172..499513) /locus_tag="RTM1035_02360" /note="COG2963 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="ISPsy21, transposase orfA" /protein_id="jcventer:1101493006646_RTM1035_02360" /translation="MMVMTKSKMANRYSPEVRARAVRMVFEHQGSYETQAGAIAAIAP KIGCIPQTLREWVKQAEKDNGMRDGVTIEERDRIKALEREVRELRQANEILRKASAYF AQAELDRPLKR" gene complement(499628..501241) /locus_tag="RTM1035_02365" CDS complement(499628..501241) /locus_tag="RTM1035_02365" /note="COG1061 DNA or RNA helicases of superfamily II" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02365" /db_xref="CDD:31261" /translation="MDWLQAGEDRHFLINAAPGAGKTICASVIAQRLLEADMIDRVIV IAPRKTVVNQWGDEFNFVTGRSMLKITGADEEPEEYGADLCATWSAVQGSLDGLQAVC RKDRTLVICDEHHHAAVEAAWGDGANGAFADAKFALILTGTPIRSDGKESVWLAYDNQ GQIDHPEDGSYTLTYGEAVDLEYCRPITFHRHEGKFSVKLDDGENISVSGTEETQFSD GLKRIKGLQQALDYYKLACTPKYLPSGAADPVSYQASLLQWCIDKLNDLRLRMPEAGG LVIAPNIPVAEYMAELLELLDGEKPVVVHNRVANPDGKIAAFRNSKKRWLVSVAMVSE GVDIQRLRIMAYLPNAQTELSFRQAMGRVVRNFGPQDDSRAYVVMPTHRIFEEYARRV EAEMSPTKRRPSDTPDTKVCPDCGAECPKDAAACHVCDAEFPVRPPRMKTCDACGSLN PLSAKNCQSCGEGFGHDFEISLSDALRVGAIIRGMDLDEEEVQEGEAIRDVFRKGVLS SGDDQLIKILKLLPEESYGRLARMFEENK" gene complement(501279..501446) /locus_tag="RTM1035_02370" CDS complement(501279..501446) /locus_tag="RTM1035_02370" /note="COG1403 Restriction endonuclease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02370" /db_xref="CDD:31593" /translation="MLAGNLCQKCGEVLDASFHADHVHAHSRGGATVLKNGQALCATC NLKKGASNDDY" gene complement(501485..501751) /locus_tag="RTM1035_02375" CDS complement(501485..501751) /locus_tag="RTM1035_02375" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02375" /translation="MAEYKAASALREHMLEGNPVTLLEAILLFGVRNPNAEFTRIKKD RFLIESREVPMAKVIRRINEYAVCKVPEELPYKEIQLTEYWIKK" gene complement(501744..502100) /locus_tag="RTM1035_02380" CDS complement(501744..502100) /locus_tag="RTM1035_02380" /note="COG0081 Ribosomal protein L1" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02380" /translation="MKTKQKLQGVSLLSAIFGELSQQLPEGVVSTEELLGAAQKLIEL SKREYVTDGHPDQRRHQGYYSYDLCTAFDKFQGRILETETGLMEDPLAGRGGRNGLKE LLLGSQEDMILEEVYG" gene complement(502139..502594) /locus_tag="RTM1035_02385" CDS complement(502139..502594) /locus_tag="RTM1035_02385" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02385" /translation="MMGIKIHKNNYLWPSPRGVLLECIKKFVANHKKYLVMMRKLSYL KVSSGDGRKLWGCQKMAQREKDELEGVTAKVSALTKALLDEGIGPSMIAFALTSVAAD MGLQASGDPMRVFPVLLGAISEQARLRFEGSAEEEGEGPACVPLGATVH" gene 502670..504154 /locus_tag="RTM1035_02390" CDS 502670..504154 /locus_tag="RTM1035_02390" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="sigma 54-dependent transcriptional activator" /protein_id="jcventer:1101493006646_RTM1035_02390" /db_xref="CDD:32386" /translation="MKILMAWIGTQDLDAPTHTERQTGPICSAVEARRFDRLVLIANQ DSAKVAAYTGWLRQRASAEIIVESVQLKDPTDIDAIHAIAVDVVEGCRRAAAPHIPEF TFHLSPGTWAMALVWAILGATRFPAELLQSSREGGVQTIEIPFDVSAELLPKIMESAD AKLTRLSGGLDVKTFGDLIFRSPAMERMASKATKAAMRNVPILIEGEAGTEKEVLARA IHGYGPRREQPFVSLNCGALKPEQIDAQIFGSGDPGSNGTGALAQAAGGTLYLDEVEL LPPQAQVRLQVLLDEMVGDDITTSNSGNADVRIIAATRKQLINAVTAGDFREELFFGL AVLVLKIPPLRERMGDLGPLIEMLLERINEQSVDEPGFVTKTLSPGAKNVLLQRPWPG NLRELENSLRRAAIWSEGSQITENDVWDAVFTAPRPAAPQDSILDKPIDEGVNLQEIL ADVARHYITRAIAQAEGNKTNAAKLIGLPSYQTLTNWMTKYGVS" gene 504233..507661 /locus_tag="RTM1035_02395" CDS 504233..507661 /locus_tag="RTM1035_02395" /note="COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases" /codon_start=1 /transl_table=11 /product="putative type I restriction enzyme R protein" /protein_id="jcventer:1101493006646_RTM1035_02395" /db_xref="CDD:33853" /translation="MKSRNFEFLRPEWQELAELGALAEAYAYADPASALVKLRLFAEN LTKDIYRDLRLPKPDQATFIDLLRNESFSAIVPKVVLDKLHALRIHGNKAAHGDPAST KNALWLIKEAFDLSRWIFVQARKGMSDELPKFSEILQSAGDDTKGKLKREKRELLEKL AGQEAQMEKLLQELEEARQTATAAEKEASEIAALASSAAETANLLKFDEATTRARIID SLIASAGWNVANGEVSTSEVGKEVQIPSQPTATGIGYADYVLWDDDGSPLAVVEAKKT SVDPETGRQQAKLYADGLEKVHGQRPVIFYTNGYDIWMWDDAGGYPPRKTYGYYSKDS LQYLVKFQRKSRKALNTIEPRSDIVNRLYQIEAIKRVSERFTGNHRKSLVVQATGTGK TRVAIALTELLIRAGWVKRVLFLCDRRELRKQAKNAFGDFLASEPIRVVSGRIDSTAK ERIFIGTYPAMKKVFQSFDVGYFDLIIADESHRSIYNVYGDIFTYFDSLQIGLTATPV DFVTRSTFDLFQCEGQLPTANYDLEEAVRDGFLTPFEVFEHTTQFMREGITLDTLTAE QIKELEDQGEDPSQYDFAAAQIDNVIYNKDTNRAILRNLMENGLRDATGQTPGKSIIF ARNHQHAVLLRQLFDEMYPQYGGRFCQVIDNYDPRAEQLIDDFKGNDDGKNDELTIAI SVDMLDTGIDIPEILNLVFAKPVKSPVKFWQMIGRGTRLCEDLFGPGEHKSVFRIFDH WGNFERFETGYRPAEPTQSKSLLQLVFEERINLAKLALQKSEIAAFEAIIELIGKDIN DLPEESVAVREKWREKRSLGAPETLKAFAPASVVALRQVIAPLMQWRNIRGHGDAYAL DLLIARIQIAVLRQSNTVGDLKIDMLERLGALQMHLNPVREKADVIKTVKSDAFWDDL TVEKLEEVRTPLREIMRYRERTTGPAVPPKIIDVTETKSEVQSARRKVSLDAVNMKAY RNVVEEELRKHFDENPTLQRISRGEPVAQADIEKLVSLILAQTPGVNREILEEFFSET AAPLDFVIRSIIGLDPETVEAKFADFARTHPSLKAKQTRFLGLLKNHIARYGSITRAK LYEDPFTVVDADGPDGVFANEKDVDELMEIVDQFAPPATASGDQQEASERTKDQ" gene 507658..509190 /locus_tag="RTM1035_02400" CDS 507658..509190 /locus_tag="RTM1035_02400" /note="COG0286 Type I restriction-modification system methyltransferase subunit" /codon_start=1 /transl_table=11 /product="putative type I restriction enzyme M protein" /protein_id="jcventer:1101493006646_RTM1035_02400" /db_xref="CDD:30634" /translation="MITGALKRDIDALWTEFWQGGITNPLTVIEQITFLMFARLLDIN ETRDENRLKRAGKRDNPPRFKEDEQHLRWSHFRHLGADEMLPLIRDEVFPHFRKSSTS GSAFAEFMKDAQLMIQKPSLLVKAVNMIDKLPLTEGDTKGDLYEYLLSKLTTAGINGQ FRTPRHIIKLMIELLAPQPNEIIGDPSAGTGGFLVETMQYLMKEHTSEEGIDEVTDPE TGKTEKIYTGDLLEDHREHIRSKMFHGFDFDATMLRIAAMNLMLHGVDDPDIHYQDTL STSFSDKYPQSASDGFDVILANPPFKGTLDFEDVHPGLLRKVKTKKTELLFLVLILRM LKDNSGRSATIVPDGVLFGSSTAHVALRRMLIDDNQLEAVISLPSGVFKPYAGVSTGI LVFRKGGRTDDVFFFEVEHDGFTLDDKRDPTPDKDDLPGCVEAWKNRDAQRLTDRTQK AFFVPAEEIRQSNYDLSLSKYKERLYKEEAYDPPAEILARMKSLNDDIARDLAELEGM LG" gene 509187..510371 /locus_tag="RTM1035_02405" CDS 509187..510371 /locus_tag="RTM1035_02405" /note="COG0732 Restriction endonuclease S subunits" /codon_start=1 /transl_table=11 /product="restriction modification system DNA specificity domain" /protein_id="jcventer:1101493006646_RTM1035_02405" /db_xref="CDD:31076" /translation="MTATIPLGELVSIRGGGTPSRGKKEFWGGPIPWATVKDFKTTSL DSTLESITEDGVRKSATNIVPAGSIVVPTRMAVGKAAINTIDVAINQDLKALLPKGEI DTRFLLHFLLSKSNFLESQAQGATVKGIKLDLLKSLPFPDLSLNEQRRIAAILDKADA IRRKREQALNLADEFLMSVFLEMFGDPIENPHNFPKEKVKLHLSKSRAGTQSGPFGAA LKKHEYVPEGIPVWGVENVQYNRFIDKPRLFITEDKFNDLLRYSVQHGDILISRAGTV GRMCIASTSEERSIISTNLIRVALDPASLTAEYFVSLFSYLPGRVGALKANNKDDAFT FLNPKTLKEIEIPIPDMTQQKRFVSILHRVQHSIRRQGDQLAGFSDLFSSLSQRAFRG EL" gene 510381..512267 /locus_tag="RTM1035_02410" CDS 510381..512267 /locus_tag="RTM1035_02410" /note="COG4938 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02410" /db_xref="CDD:34546" /translation="MRLSHIEIENFKGIGTKQSIDLAPITLLFGPNSAGKSTILQALH YLREILERNNPDPDQTIAGGLTDLGGFATLVHNHDLSRPIRIKVRIDMTEDQGSERLP LNSGASLRDDRFNELGIRYLVGENTELRDYAVVQEVGIGIEVRWSDLINAPYVSCLDV EMDEEALCSVVSPAQVGRAMATDFNFEHSLLQPIRYPYDYPEEDETLGFLNVLSEDGE VHKERALSTDLLEAIWHNSREMSSVMEEMSEQELEDSADGSAWDTDVRVGIETELGAL PEIDKPLASDFVDPDRDLSMRALMAGESAADKIMDRTFGRSSRMTRDENDAYDNALKH YKQQLDTVAGLSAIMDELILGPVRIVRDYLASVTYIGPLREIPSRGYRPRLSPDESRW AQGLAAWDLLYTQPEEGLLDSVNEWMSSEERLRTGYVLVKSSYKQISTAEGLHQLFKR GINEDDLGDLQELYEAIPTKSEIGLMDVVRSIPVAPSDVGVGISQMVPVVVACLMEPD GLVAIEQPELHIHPAIQVGLGDLFISATSTYQPATGPERSLLVETHSEHIMLRLLRRI REQSENELPPGILGLTPNDLSVVYVEATEQGPVFKKLRVSEDGDFIDSWPKGFFEERA EELF" gene 512267..513193 /locus_tag="RTM1035_02415" CDS 512267..513193 /locus_tag="RTM1035_02415" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02415" /translation="MHYEYAVEPQAIGSSWENFRYLIEKFGFDKGRLISQFPKSWFRE VYEAADTLSPMQRKRVEEALNHAKKNKVVRSGRPYDPTIGSWLENALVEHKRQPFHAI IASEAPKGEASALSMDTLDESAPLMKVPHEEDIVRDIGSIATALRGLLHFGSRLVFVD AYFDPFNTRQKKLFRELFRTVAELNPRAICEIHYRNDTKKGLSNDILKREAAVLSKDI IPPGIRITFFCWCEKDAGEDFHARYLLTEKGGIRVDAGFEPIGSHETSDFSLMDYELV HRRLAAISRDSDVYKLVGPVICISSDGSVETL" gene complement(513566..514093) /locus_tag="RTM1035_02420" CDS complement(513566..514093) /locus_tag="RTM1035_02420" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02420" /translation="MKELGPDNAFWIDGEWLDWDSIIDPEEVRYSRLAELEREARLRL KYPNADLTLIPYFQDLLTLAESYFQETGQHLNVYGDIGELFGAIMYGIKLHRNYAQGS DGRLGNDFVEIKTISPLNSKEQINVRLDRHFNRLLIVKISADFEVAGRLVKRVNLPRR TGKNLRLAWTHMPEL" gene complement(514430..514501) /locus_tag="RTM1035_t02998" tRNA complement(514430..514501) /locus_tag="RTM1035_t02998" /product="tRNA-Phe" gene complement(514579..514761) /locus_tag="RTM1035_02425" CDS complement(514579..514761) /locus_tag="RTM1035_02425" /note="COG3024 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02425" /db_xref="CDD:43801" /translation="MSCPICQRKTDARYRPFCSRRCADVDLGKWFAGDYAVPSSDPAD IEEALDALEQEQQKPH" gene complement(514758..515783) /locus_tag="RTM1035_02430" CDS complement(514758..515783) /locus_tag="RTM1035_02430" /note="COG1530 Ribonucleases G and E" /codon_start=1 /transl_table=11 /product="ribonuclease, Rne/Rng family protein" /protein_id="jcventer:1101493006646_RTM1035_02430" /db_xref="CDD:31719" /translation="MTLRTIALDHINDAEAAALLVGGRLEDLLIDSDQPRPGTIYRAI ADRPVKGQGGMFLRTPDGSAFLRQIKGLTPGQPLLVQVTGHAEPGKALPVTTRLLFKS RYAIVTPDAPGLNVSRSIKDETLRDSLLEIAHAEMGDSPMGLILRSSCESAEAADIAE DVNAMRDLAEAVLADATGPEPETLTEGDGPHTLAWRDWVEPADVLTDPGSFAENGVLD QLDALREALVPLPGGASFYIEPTRALVAVDVNTGGDASLAAGLKANIAMARDLPRQLR LRGLGGQITLDLAPMPKKDRRTFEASLRAALRQDTTETTLAGWTPLGHFELQRKRDRQ PLTDLLK" gene complement(515780..516358) /locus_tag="RTM1035_02435" CDS complement(515780..516358) /locus_tag="RTM1035_02435" /note="COG0424 Nucleotide-binding protein implicated in inhibition of septum formation" /codon_start=1 /transl_table=11 /product="maf protein" /protein_id="jcventer:1101493006646_RTM1035_02435" /db_xref="CDD:30773" /translation="MRLILGSGSPRRRDLLAQIGVVADKILPPEIDETPAKAELPRPY CARMAREKAWTVVAEDDDIVLCADTTVALGRRILGKPQDVGEAAQFLLALSGRRHRVI TAVAVRRGSRIWERDVVTTVQMKRLSDEELNAYLATNDWQGKAGGYAIQGPAGALIPW IQGSFTAVVGLPLTETAGLLRAAGYPLWKDTQ" gene complement(516355..516546) /gene="infA" /locus_tag="RTM1035_02440" CDS complement(516355..516546) /gene="infA" /locus_tag="RTM1035_02440" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-1" /protein_id="jcventer:1101493006646_RTM1035_02440" /translation="MACSAEYGQAYRAASKEAVAYLHELTEEMNDPQAKAVLNTAAFS LGATLRAHATALQDKADLE" gene complement(516549..516767) /locus_tag="RTM1035_02445" CDS complement(516549..516767) /locus_tag="RTM1035_02445" /note="COG0361 Translation initiation factor 1 (IF-1)" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-1" /protein_id="jcventer:1101493006646_RTM1035_02445" /db_xref="CDD:30710" /translation="MAKEDTLEFPGVVKELLPNATFRVELENGHEIIAHTAGKMRKNR IRVLAGDKVQVEMTPYDLTKGRINYRFK" gene complement(516851..517735) /locus_tag="RTM1035_02450" CDS complement(516851..517735) /locus_tag="RTM1035_02450" /note="COG0388 Predicted amidohydrolase" /codon_start=1 /transl_table=11 /product="hydrolase, carbon-nitrogen family protein" /protein_id="jcventer:1101493006646_RTM1035_02450" /db_xref="CDD:30737" /translation="MKIATAAYPLDPLTSWADYHRKLTDWVAEAAAQGAELAVFPEYG AMELAMLAGTEAAGDLERSLHAVSGVMSEAYDLHAELATQYNLHILGASAPVFDPDLG PRPVNRAMLFTPTGARAAQDKQIMTRFEREEWHVAPGGPLRLFDTSLGKIGILICYDS EFPLLGKALADADLILVPSCTEALTGYSRVRIGAMARALEMQCVTVMASTVGTADWSP AVDTNCGMGGVFGPPDTGFPPTGVLAEGTLNRPGWTYAEVDLDRITHVRADGVVLNRR HWEDQLGRDVTVTSEPLR" gene 517896..518186 /locus_tag="RTM1035_02455" CDS 517896..518186 /locus_tag="RTM1035_02455" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02455" /translation="MYDEMPVHRVRTRLRRVVDHLAAGGQRVMVLRNGVAVAGLVSVS DLQALEQADQARMEHHAIRAQARLRDIGLLKAGLDSARLEARARYGPPDTKR" gene complement(518149..519384) /locus_tag="RTM1035_02460" CDS complement(518149..519384) /locus_tag="RTM1035_02460" /note="COG3748 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02460" /db_xref="CDD:46072" /translation="MPEPAILLEWAGFAARWLHVITAMAWIGTSFYFIALDLGLRRAP DLPMGAQGEDWQVHGGGFYHIRKYLVAPPQMPDHLTWFKWESYATWLSGAALLMLVYW ASADLYLLSAESPLTQSQGIALSAGSLALGWLIYDRLCKSGLAAQPTRLMLVLFALLT AMGWAYTQVFTGRAMMLHLGAFTATIMTANVFLIIMPNQRIVVADLRAGRTPEARYGQ IAKLRSTHNNYLTLPVIFLMLSNHYPLAFATPYNWLIASLVFLMGVTIRHFFNSLHAG RGRPWWAWGVTALIFAAIVWLSALGGPNTADTTPKTTRLSPAQTRLSEAPGFDTVQEI VALRCAMCHATEPLWPGMIHAPKGVILETPADLARQARALYLQAGLSHAMPPANLTAM APSERATLIAWYRAGRTAP" gene 519533..520930 /locus_tag="RTM1035_02465" CDS 519533..520930 /locus_tag="RTM1035_02465" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /protein_id="jcventer:1101493006646_RTM1035_02465" /db_xref="CDD:33594" /translation="MAIQKLYAGAKLRETRQRLGLTQKDFAGKLGVSLPYLNQMENNN RPVSTTVVLALAQEFGFDVTELSTGDAERMVSDMREALADPVFGDDPPPLADLRLTAS NAPALARAFLELHSAYRQTHERLASLDEALGREDARNQSSPWDEVRDFFHYCDNYIDA VDHAAERFAEAGGGPAISDLACARLAALGISVVEADTAQLRHYDRAAGVLTLSSRAAP ESRRFQLLLQLALVMQDQLLEATLDFARFQSDAARSIAKIGLANYFAGAAMMPYGRFL TAAQEVRHDLEVLAHRFGASIEQVCHRLSTLQRPGAKGIPFFFVRVDQAGTITKRHSA TRLQFARFGGACPLWNVHRAFETPGRFLRQLAETPDGVRYISLARDVSKPGGSFGAPV RRFAIALGCEVKHAGELVYADDLDVSRARAFEPIGISCRICERAECHQRSVPPLERRL QVTPDERGVLPYRVG" gene complement(520945..522978) /locus_tag="RTM1035_02470" CDS complement(520945..522978) /locus_tag="RTM1035_02470" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="Methyltransferase FkbM" /protein_id="jcventer:1101493006646_RTM1035_02470" /db_xref="CDD:30787" /translation="MAKSATIKTAPTPVAAAPVPVLNLPMSRGNPYQPLLYAAPDAGF RTEPLAKTEITDLPRLLAEGHRLLHLHWDDLIFGRSRDSAANANEAERDLAALAAFKA GGGRILWTVHNRTPHRDMDPETFRAARARVVTLADLVHVHTPDAALYMQRDWGVDPAR LRILPHPSYLGHYEPAETSLGRDLPDCAARAFLFFGAFRANKGLDTLVDTARTLIRRD VPFHLHLCGRAARSHQKLFRALQDTDCVTLTDEAVPDEQVAGIFARAQVFVAPFGNLF TSGSVMLAQGFGLPVIGPDTEALRAHVAPENHDLLYDPGAPRGLLRMMTRLVEMPNDE LRSRRAAALALAQDRAPARIAAQMMQVLADLRDGTGASLQAVQPTPIAAAHPATPAPS AQARAQQRLADLTRTLGLTDPLRILDIGANPMNHDAPYKELLAAGHAHVTGFEPQPEA LAALNARKSPQETYFPDVVGDGATHRLNLYRGSGLASLLEIRQPTLDHLLGLRRAARP TGHVDLPSRKLDEIEGIGRVDFLKIDVQGAEAMIFTHAQTALSQTLAVQSEVNFFPLY DNQPSFGEIDRLLQAHGLVPHSFLHIEKRLLRSRWLGRIADATPQQMLDGDILYLRDL SRPDTLDSTDLRKIALLCDTCYGFTDITLRCLEILVERGEIKPRVAERFIDSL" gene complement(523138..524163) /locus_tag="RTM1035_02475" CDS complement(523138..524163) /locus_tag="RTM1035_02475" /note="COG1879 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="periplasmic sensory protein associated with the TorRS two-component regulatory system" /protein_id="jcventer:1101493006646_RTM1035_02475" /db_xref="CDD:32063" /translation="MLALLAPLPLAADPWALQTHTVPFDYTSPARPLTYTPLDRAASP WTLCISYPHLKDAYWLSVNFGMVEEAQRLGVGFRLVEAGGYPNLDRQIEQITNCVAQG ADALVVGTVSFEGLTPTVQALSEQVPVIATVNDIADPGIAAKAAVSWYDMGAITGRFI AKRHPKGSAPVRLAWFPGPQGAGWVSFVEAGFRDAIAESAAEIVLTKYGDTGREIQVT LVEETLDSGVAIDYIVGSAPTAEVAVSILRARGLEGQINIVSDYMSHAVFRGIRRGRI LAAPTDFPIMQGKLAIEMAVRAIEGTLETRHAGPQIMLVTPDMVGNTDLAETLAPASF IPVFELD" gene 524263..527178 /locus_tag="RTM1035_02480" CDS 524263..527178 /locus_tag="RTM1035_02480" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="Hypothetical sensor protein TorS" /protein_id="jcventer:1101493006646_RTM1035_02480" /db_xref="CDD:30987" /translation="MKSRTGLGARLLAAFLVIAGLPALAGFFGWFELRDVTQAQQQLY DRSIPVLSDMRRFTEESSAIITVAPELAAVDDEAARRDRAAYLGARVAALSDHLSRFQ AEHGGGSGGELTRAVVAMEAGIAELDRLVKQRLSLVQARREGLDRALGATSALLNMAD TLVANAEMSTAAVISNLYDDDTGSAQHLATLDKLIEVDLFELGLMFELRSRTAEIGLL FNRIAGLSDAAGLVPIRATLGERTEIVARRVAAIRDPGRAAQAQTLLGTILSLSDPAG PGGLLGLTEGILELDGRIESAQAALRVSADGLHVAVTDLASRVQAEAQRAGAASLEVI RATRLRSAGAAGLALLLSLAVLWFYVRGNISRRLDNLSDMMTRLAAGQLDMRVAPRGN DEIAGMERAVEVFRRQAIANRTLEEARRRNEEELARHRNALQELVAEKTEALRGEVEA HAVARQKAEAADRAKSEFLAMMSHEIRTPMNGVLGMLRTLSAEGLPDAQLEQLRAARA SGESLLTILNDILSYSKTELSGAHLERLVFSVAEVMQVIVTLLDPGAREKGIVLWLDL PEDAPAAVMGDMAKLRQILFNLVSNAVKFTEEGEVVLRLRVRAAGAGRVTLILEVSDT GKGISAQARQRIFEAFEQEDGLTARRYGGTGLGLAICRKFAEVMGGALSVESTPHVGS VFTFMADFELADPALLAESVPEWTPERAGRSLHALIVEDHSVNQMVARSYLERMGHTA VCVDSGEDALDLLKRERFDLVLMDVNLPGLSGTDATRRLRGLPEGQDLPVIGISAHVQ EEEVAQQLDAGMDCFVAKPVSPERLAAAIAQVTGGQRRGVFLSPRSVSLPMGGARDGL GAMLADLGPEQTAAAIRLYLDGVGEEARALAAAVDAEDAAGVAKVAHRMKGAAGNFSL PGLSAGLRALEEAARAGDAGAMRGAMAAVPAEIAAARATLLRATDGLADQSKVAVNT" gene complement(527151..527852) /locus_tag="RTM1035_02485" CDS complement(527151..527852) /locus_tag="RTM1035_02485" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, winged helix family protein" /protein_id="jcventer:1101493006646_RTM1035_02485" /db_xref="CDD:31088" /translation="MPRAAHIVIIEDEPVTRTTLAEYLMSHGYTVTAFDSAERAETML GSDRADLLLVDITLDGKDGLQITREQRARSDIGIILTTSLSDDVDRIVGLELGADDYV CKPFNRRELLARIKNLLRRTEAQRRLSRQNLRFHGFSFAFATRQLTGPDGQPIRLTRA EYEVLAELLRHPGAVLSRDRLMTVITHRQEHPDTRTVDVIIRRLRTKLEEDPGAPRLI TTAHGEGYVFTATLD" gene 528012..528953 /locus_tag="RTM1035_02490" CDS 528012..528953 /locus_tag="RTM1035_02490" /note="COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="glycine betaine/proline ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006646_RTM1035_02490" /db_xref="CDD:32296" /translation="MTQRLRLIGGAAVLALAATGALADSEDPIVIPIHNWSSQIVMSN VVGQIFESMGNNVEYVSTDSQSVYESVRLGDVALEMEVWEGAFGASFRAALEKGGLHD AGDHNAVTREDWWYPMWTKEACPGLPDWQALNECAALFATPETGDAGRFLGGPVDWLK HDQERVDGLGMNFKVVNAGSAAALWAEIGAAEKTKKPIVVFNWTPNFAEAVWPGEFVE FPTWVEGCDKDPAVGPNPDKTYDCGNPANGYMKKAAWDGMKEKWPDAYEMLTKISFTN PQIAEMAKLVDIDEMEPEEAATHWLEENGDVWKVWIN" gene 529027..530058 /locus_tag="RTM1035_02495" CDS 529027..530058 /locus_tag="RTM1035_02495" /note="COG4175 ABC-type proline/glycine betaine transport system, ATPase component" /codon_start=1 /transl_table=11 /product="glycine betaine/proline ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006646_RTM1035_02495" /db_xref="CDD:48327" /translation="MPVSEPVISCRNVWKLFGPAPEAYLGGLKGDPGFEVIRQAGYIS AVRDVSLDIARGEMLVIMGLSGSGKSTLVRCLSRLIEITGGTVSVEGQDIGALSETQL IELRRNKMGMVFQSFGLLPHRTVLENVAFPLEMRGQNRATRRKRALEVIELVGLGGRE DYFPRELSGGQQQRVGIARSLAIEPDIWFLDEPFSALDPLIRREMQDEFLRLQGMLGK TIVFITHDFDEALRLADRIAIMKDGAVEQCDTPDQIVLNPATDYVRKFTEEIEKARVV HASGLARPINGVTPEGLPVAGKSTIRALARQLIDDPRESLPVADEAGRITGVLSRKEA LDVLLGGQA" gene 530055..532010 /locus_tag="RTM1035_02500" CDS 530055..532010 /locus_tag="RTM1035_02500" /note="COG4176 ABC-type proline/glycine betaine transport system, permease component" /codon_start=1 /transl_table=11 /product="glycine betaine/proline ABC transporter, permease protein" /protein_id="jcventer:1101493006646_RTM1035_02500" /db_xref="CDD:33916" /translation="MSESALPLATTAKPRLNPAWVVLGLALCLILARPYLPEGLMRPV EGMILPLADWINAVFTWLRDDLGLIHVTRAFADGIEWLLDVTANILYGKNRWPRIGPL PWIVVALSAGCLGYWLGGLRLALLAGGTFVWIALMGQWQWAMETLSVIVVAAPVSVLL GLMMGVATWRWRWVEAVMNPVLNIAQSLPHFAYMIPIVVFIGVGPKAGAIVTIIFSVP PMIRMTLLGLRKVPPEVIESGKMCGSTSWQLMTRVRIPTARTEILVGVNQVIMQCLAM VVLASFIGMPGLGQKLLQLLQALKIGRSIEIGITIVLLAVALDRCSKAWAERQPVHHE PGLSWTARHRVMSVWAVLMVAGFALSAVVPFFAEVGRGQSLSLADPLDAMMSWVIVTL DPVTQWLRWFLITWVLIPVRDALLWLPYTAVLALVAAAGLAVGGWRSALICVGFIGYI AITGWWDRAMITVYTVLVAVAVATSFGFPLGIWAARHEARAKRVLLLCDSLQTFPSFI YLIPVIMLFGVNDVAVVGAVVLFAAVPLIRYTIEGLRGVPEAVIEAADMSGATRGQSL WHVRLPLALPTIMVGINQSLMFSLFMVIIAAFIGTQDLGQEMQRALSSTDVGKGLVLG FAVAFIGLAADHLINKMAEGRRRTLGL" gene 532185..534476 /locus_tag="RTM1035_02505" CDS 532185..534476 /locus_tag="RTM1035_02505" /note="COG1982 Arginine/lysine/ornithine decarboxylases" /codon_start=1 /transl_table=11 /product="Lysine decarboxylase" /protein_id="jcventer:1101493006646_RTM1035_02505" /db_xref="CDD:32165" /translation="MKFHFPIVIIDEDFRSENSSGLGIRAMAKAMEDEGFEVLGVTSY GDLSQFAQQQSRASAFVLSIDDEEFSPGPDIDPVITNLRNFVQEVRRKNADVPIYVYG ETKTSRHLPNDILRELHGFIHAFEDTPEFVARHIIREAKIYLEGIQPPFFKALLDYAE DGSYSWHCPGHSGGVAFLKSPIGQMYHQFYGENMLRADVCNSVEELGQLLDHDGAIGA SERNAARIFNADHCFFVTNGTSTSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGA IPVFLRPTRNNFGIIGPIPRGEFEIDAIKAKIRANPLLKGVDPDTVKPRILTLTQSTY DGVLYNTEVIKDLLDGYVENLHFDEAWLPHASFHPFYSSFHAMGRSRERPLHSVTYVT QSIHKLLAGISQASHVLVQDSQTTKLDRHLFNEAYLMHTSTSPQYSIIASCDVAAAMM EPPAGTALVEESIAESLDFRRAMQKVDAEFGDDDWWFQVWGPDVLDEEGIGEMRDWVL KRTDAHGVQASDGEESWHDFGEMAPGFNMLDPIKATIITPGLNLDGRFEQTGIPASIV TKYLAEHGVVVEKTGLYSFFIMFTIGITKGRWNTLLTALQQFKDDYDKNQPMWRAMPE FCAKQPRYEGMGLRDLCQHVHTLYAKYDVAILSTEMYLSDLTPAMTPSEAFAHIARRT TERVAIDDLEGRVTTSLVTPYPPGIPLLIPGEVFNKTIVQYLRFNREFGRECPGFETD IHGLVQEVGEDGVTRYFADCVAG" gene complement(534486..535835) /locus_tag="RTM1035_02510" CDS complement(534486..535835) /locus_tag="RTM1035_02510" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="glutamine synthetase" /protein_id="jcventer:1101493006646_RTM1035_02510" /db_xref="CDD:40220" /translation="MTTTNIRQWLQERPEIESVFACVCDLNGAMRGKRLPIEKAKSIM DDGLRLPLSVLSVDIWGEDIENNELVFETGDSDGICEHTGRPIVMVNWTSRPSALVMF WMHTEDGSPFPGDPRHALSNIVQRYKARGLTPVVATELEFYLCDPREAQPRPPCSPVT GKRLDSDGALSLDELEHFDEFLNDVYDACHEQGIPADAAISENGAGQFEINMVHVADP LQAADDAVLFKRLVRGIARKHGMAATFMAKPYGDRSGSGFHVHFSLVDENGVNLFDNG GDTGTPLLLNAVGGLLETMHENTLTFAPHQNSYRRLLPGTHAPTGISWGYENRTAAIR IPGGNHKARRIEHRVAGADANPYLVLGSILGGALIGIEQGIAPCPPIDGDAYSQKLDH LPLDWATAIQAFRRGRHVQDIFSRRLQTMLVECKMQELKRFTRYVTDFEYDAYLESV" gene 536032..537570 /locus_tag="RTM1035_02515" CDS 536032..537570 /locus_tag="RTM1035_02515" /note="COG0728 Uncharacterized membrane protein, putative virulence factor" /codon_start=1 /transl_table=11 /product="integral membrane protein MviN" /protein_id="jcventer:1101493006646_RTM1035_02515" /db_xref="CDD:31072" /translation="MKPVRLLSGILTVGGWTLLSRLLGFVRDVLIASYIGPGAVMDAF VAAFRLPNMFRRFFAEGAFNAAFVPMFSKRLEAGDNPLGFAALACSGLSLVLLGLTGL CMVFMPALVWATAEGFVGDARFDLTVEFGRIVFPYIFFISLAALFSGMLNAAGHFAAA AAAPVLLNVLLIGAMSFAAVTGGAVAQALVWTIPVAGVAQLALVWHATRRAGLSLPLV RPRWTPEMAQLVRIAIPAALAGGVVQINLVVGQLVASNTEKAVSWLYSADRLYQLPLG VVGIAVGIVLLPDLSRRLKAQDDVGARMALSRAGEIALALTIPCAVALIVIPIQLVSV LFERGAFGADDSAATALAVAIYGLGLPAFVLQKILQPLFFAREDTRSPFRYAVWAMAV NGVLAVGLAMLIGWIAAAIATTIAAWIMVVQLAAGARQFGEVARFDAQFRRRLWRICL ASVLMGAVLWGAGVVLGPLFGMGGWRWLALLVLIAVGTLAYALFGQGLGAFRIQEIRG RLRR" gene complement(537793..538479) /locus_tag="RTM1035_02520" CDS complement(537793..538479) /locus_tag="RTM1035_02520" /note="COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)" /codon_start=1 /transl_table=11 /product="rhomboid family protein" /protein_id="jcventer:1101493006646_RTM1035_02520" /db_xref="CDD:41727" /translation="MPDQGPPAPVNPLPPFLIALFLVIMGVEAAFTLGARGLVGGPDA VGWRAAAIQDYGFNGEILGWMLEHHAYPAEHLRRLLSYAFIHGSFTHALFAGVLLLAM GKFVSDVFRHWAVLVLFAVSTVVGAVIFGLVAPGRPWLIGAFPGVYGLIGGFTYIMWL RLGQMGTNQVRAFTLIGVLMGLQLVFGLLFGGNATWIADVSGFASGFLASFVLSPGGW SRLRAKLRHD" gene 538554..539582 /locus_tag="RTM1035_02525" CDS 538554..539582 /locus_tag="RTM1035_02525" /EC_number="6.1.1.2" /note="COG0180 Tryptophanyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="tryptophanyl-tRNA synthetase" /protein_id="jcventer:1101493006646_RTM1035_02525" /db_xref="CDD:30529" /translation="MTEAAFTPRVFSGIQPSGNLHLGNYLGALKRFAEAQNKGIQTLY CMVDLHAITVWQNPADLARATRELAAGFIASGLDPAKSILFNQSQVAEHTQMAWVFNC VARMGWMQRMTQFKDKAGKNAQNASLGLFAYPALMAADILTYHATHVPVGEDQKQHLE LTRDIAIKFNHDYGVEFFPIPEPVIEGAATRVMSLRDGSNKMSKSDPSDMSRINLTDD ADTIAKKIRKAKTDPEPLPSEAAGLEGRPEARNLVNIYAALADMTVDQVMAEAGGKPF SEFKPMLADLAVDRIAPISTEMARLMQDLSEIDRILADGAARARTIAAPILRQTYEIM GMVGTREV" gene 539654..540136 /locus_tag="RTM1035_02530" CDS 539654..540136 /locus_tag="RTM1035_02530" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family, NudH subfamily protein" /protein_id="jcventer:1101493006646_RTM1035_02530" /db_xref="CDD:40389" /translation="MTPEEIAKLPYRRCVGVMLVNAAGQVFVGQRIDNEVPAWQMPQG GIDKGESVTEAALRELWEETGVTADKVRVEAETTGWLTYDLPQEMVPRIWKGRYRGQE QKWVLMRFLGQDTDVNIATDHPEFSEWRWLPPSDLEANIVPFKRAVYSRVLDEFGALL " gene 540133..540618 /locus_tag="RTM1035_02535" CDS 540133..540618 /locus_tag="RTM1035_02535" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02535" /translation="MIRAAVLALGLVLAGPAVALSCFPQDVAETYRRAAEAAETYIVV HGRLAFDPARLPSTDMIPQQKPAHTLIPARLTGQALTKGGFDQAFDRAITLDVQCFGP WCASAVPGTQYLGFLERRDGGYVLAVDPCGGMGHAEPTPAMLDKALRCLQGGACTAER R" gene 540668..543565 /locus_tag="RTM1035_02540" CDS 540668..543565 /locus_tag="RTM1035_02540" /note="COG0587 DNA polymerase III, alpha subunit" /codon_start=1 /transl_table=11 /product="DNA polymerase III, alpha subunit" /protein_id="jcventer:1101493006646_RTM1035_02540" /db_xref="CDD:30932" /translation="MGLGISAAMPFAELSATSNFTFLTGASHPEEYIRHAAALGLSGV AIADVNSVAGIVRAHAAAREIAREVAARQALEARQGPIGPPAPQPAAPPDWANCPRLI PAARLVLREGIEITALPVNRGGWASLCRLISLGRQRAIKGACDLGLADVLAGAAGLHL LVHPAPGRAWQAQVLQLAARWGGSVALLLSPRYDGRDPARFERLTGLAARLGLPTVAA AAPILHRGYRRRLADVLSAIRLGVTVDRLGRHALRNAEQRLRSEEEMRRLFAGHEGAV SRAAALAARLDFSLDELRYEYPSEVAENETPAQRLRRLAEAGLEWRYPGGAPARVRGM MEHELALIAKLRYEPYFLTVHDVVAFARSRGILCQGRGSAANSVVCYCLGVTSVSPEI GTMVFERFVSEARDEPPDIDVDFEHERREEVIQWIYERYGRHRAGLCATVIHYRTKRA IREVGRAMGLSEDLLGAMTSQIWGHGGEGALEPARLAEIGLDPRDPRLARTLALIREI IGFPRHLSQHVGGFVITEGRLDELVPIENASMEGRTVICWDKDDIDALGILKVDVLAL GMLTCIRKAFDLLGQHRGQVYSLATLPPEDAQVYEMLSRADSLGVFQVESRAQMNFLP RMRPRTFYDLVIQVAIIRPGPIQGDMVHPFIRRRNGEEAVSFPSDDLGRVLGKTLGVP LFQEQAMQIAIIGAGFTPEEADRLRRSLATFKKHGNVSEFRARFLRGMQANGYDSDFA ERCFSQIEGFGSYGFPESHAASFAHLVYASAWLKCHHPAIFACALLNSQPMGFYAPAQ IVRDAREHGVTLRPVCINASYWDNTIEPDSRGRLALRLGFRQIKGVAQDEADWIAAAR GNGYVGPEDVWRRAGVAPAALTRLAEADVFAALGLSRRDALWQARAIGAERPLPLFAR DIDGEGIVEPAAHLPAMTLGEEVVEDYTALRLSLRAHPLALLRHILTPPGL" gene complement(543646..544203) /locus_tag="RTM1035_02545" CDS complement(543646..544203) /locus_tag="RTM1035_02545" /note="COG0678 Peroxiredoxin" /codon_start=1 /transl_table=11 /product="Redoxin" /protein_id="jcventer:1101493006646_RTM1035_02545" /db_xref="CDD:48562" /translation="MVTCLSPAYTYIHPETLDRQGTTMTLSSGDKLPDATLLKLGEKG PEAVDLKSLTAGRKVVIFAVPGAYTPTCSAAHVPSFIRTKAQFDAAGVDEIICVSVND PFVMKAWGEATGATEAGITMLADAESAFTKAIGLDFDAPPAGLLARSKRYAMAVEDGT VTVLHVEESPGTCEVTAGESLLAAM" gene 544225..545427 /locus_tag="RTM1035_02550" CDS 544225..545427 /locus_tag="RTM1035_02550" /note="COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="pyridine nucleotide-disulphide oxidoreductase family protein" /protein_id="jcventer:1101493006646_RTM1035_02550" /db_xref="CDD:31443" /translation="MTGVVVIGAGQAGASLVAKLRSEGYDGPITLIGEEPVPPYQRPP LSKKYLLGDMALERLYLRPESYYAEAGIDLRLNARVTAIDRAAQEVVIGTERLGYAHL VLATGSRPRHLPAAIGGELGGVHVVRTLADVDAMAPGFVQGARVLIVGGGYIGLEAAA VAASRGMQVVLVEMAPRILQRVAAKETSDYFRALHGRHGVDIREGVGLERLLGDGQVS GARLTDGTEVAVDMVIVGVGIVPDTALAEAAGLEIDNGIAVDAQGRTSDPTIWAVGDC ASFPHGEGRLRLESVPNAIDMADCVAGNILGAAVAYVPKPWFWSDQYDVKLQIAGLST GYDRIVTRDGAASVSFWYFRGDQLLAVDAMNDPRAYMVGKRLIDAGKTADPAVVADAG ADLKVLLG" gene 545424..545981 /locus_tag="RTM1035_02555" CDS 545424..545981 /locus_tag="RTM1035_02555" /note="COG0742 N6-adenine-specific methylase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02555" /db_xref="CDD:31085" /translation="MRIIGGAHRGRALASVGKGDVAAHLRPTSDRVREALFNVLAGGY GDPVTGARVLDLFAGTGALGLEALSRGAQAVSFIESGRKAQSLLRQNIAFCRAEEETR VFPLDARKPGNNPMVPHDLVFLDPPYGKGLGEEALAAALEGGWISDGALIVWEESAAI TPPEGMRMIEERRYGDTMIRFLERG" gene complement(546208..547461) /locus_tag="RTM1035_02560" CDS complement(546208..547461) /locus_tag="RTM1035_02560" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein" /protein_id="jcventer:1101493006646_RTM1035_02560" /db_xref="CDD:30999" /translation="MDNPARTHILGGMTHDSDLLIVGGGLNGPALALAAAQAGLSSTV IDALPEPTRKNAAFDGRSYALALASVRLLQNLGIWDRVAEHAQPMLEIKVSDGRAGEG PSPFFLHFDHAEIEEGPMGHMLEDRFLRRALIEAMAEQPLITQVSNDTVTAQESVATG VTLTLASGKTLTGRLLIGADGRSSGTAARAGIRRTGWGYGQTALVAAIEHELPHHGIA HQFFMPPGPLAILPLPGNVSSIVWSETDATAARFAALPDADFMEVLRPRFGDFLGAIK LRGARYTYPLSLTVANSFVAERLALIGDAAHGMHPIAGQGLNAGLRDVAALAQVMTEA NRRGEDIAAPDVLARYQQWRRFDTATLALATDLTNRLFSNDNPILRTARDLGMGAISH MPRLRRGFIREAAGLTGDLPELMKG" gene 547528..548853 /locus_tag="RTM1035_02565" CDS 547528..548853 /locus_tag="RTM1035_02565" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="amidase family protein" /protein_id="jcventer:1101493006646_RTM1035_02565" /db_xref="CDD:41475" /translation="MTAGDLGRGIARGEIDPEALCETYLAAITAHPLRDRIYSAVTES RARAEAAAASARAKAGQRLGLLDGVPVSWKDLFDSAGVATEAGSALLKGRVPERDAEV LRNGTAAGLVCLGKTHMSELAFSGLGLNPVTATPPCVNDPDAVPGGSSSGAAASVAFD LAPCGIGSDTGGSVRIPAAWNDLVGLKTTSGRVSLQGVVPLCLRFDTVGPLARSVEDC ALMLAALDGRKAADLRGASLLGLRFAVLRTGVMEDIRPEPARAHAAALEMLRDAGAVI DEIEAPEVAEALPLSPVLFTGEAYGLWREVIEAAPDKMFAPILERFRSGKDISAADYV AGWRKLEALRAAWTARVAGYDAVLMPSAPNLPPDQARLLADPDYYVTENLLTLRNTRV GNLLGLCAVTLPTGVPSCGLMLCGQPYGEERLLRVAQAVEDILCPRRED" gene 548858..549478 /locus_tag="RTM1035_02570" CDS 548858..549478 /locus_tag="RTM1035_02570" /note="COG2808 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="negative transcriptional regulator" /protein_id="jcventer:1101493006646_RTM1035_02570" /db_xref="CDD:32638" /translation="MHPNPAFRQTPSERNLEFARARGFGILAVCSPEGPLMSHIPFLL NADGTRAEFHLVRSNPIARLLSGPLRARLAIEGPQSYVSPDWYGVEDQVPTWNYVAVH LVGEVTLQPQEGMRDLLDRQSAEFEARLAPKPEWRAEKMTPEVLERMMRQIVPCAMRV DEIAGTWKLGQNKPEEVRLRAADHLGPAGQGQESDLLAEWMRAPPA" gene 549540..550142 /locus_tag="RTM1035_02575" CDS 549540..550142 /locus_tag="RTM1035_02575" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /protein_id="jcventer:1101493006646_RTM1035_02575" /db_xref="CDD:48132" /translation="MKLISSPLSPFVRKVRVLLLESGLDDQVEVVDVTTTPLETDPQA AAANPLGKIPALVRLDGPAIHDSRVITRYLDARADGRFYPEARLWEVLTLEAIAEGIM EAALAMTYEARFRPEEIRYAPWVEGQWAKVARALEAVEGRWMSHLAGPLDMSHIALGC ALGYLDFRHDARGWRVGHPALEAWYAKMAARDSMMRTAPA" gene 550365..550925 /locus_tag="RTM1035_02580" CDS 550365..550925 /locus_tag="RTM1035_02580" /note="COG0723 Rieske Fe-S protein" /codon_start=1 /transl_table=11 /product="Ubiquinol-cytochrome c reductase, iron-sulfur subunit" /protein_id="jcventer:1101493006646_RTM1035_02580" /db_xref="CDD:48646" /translation="MSHAEDHEGTRRDFLYYATAGVGAVTAGAAIWPLINQMNPSADV QALSSIRVDVSGVEPGTQISVKFLGKPVFIRRRTEKEIEAARAVELAELPDQNAQNRN DLALDASDQNRTLDEAGEWLVMIGVCTHLGCVPIGDGSGDFGGWFCPCHGSHYDTAGR IRKGPAPENLWIPVATFLDETTIQLG" gene 550938..552260 /locus_tag="RTM1035_02585" CDS 550938..552260 /locus_tag="RTM1035_02585" /note="COG1290 Cytochrome b subunit of the bc complex" /codon_start=1 /transl_table=11 /product="cytochrome b/b6-like protein" /protein_id="jcventer:1101493006646_RTM1035_02585" /db_xref="CDD:31481" /translation="MSGIPHDHYEPKTSGEKWLHSRLPIVGLLYDTIMIPTPKNLNWM WIWGIVLTFCLVLQIVTGIILVMHYTPHVDLAFASVEHIMRNVNGGHFIRYLHMNGAS LFFVAVYLHIFRGLYYGSYKAPREVTWIIGMLIYLMMMGTAFMGYVLPWGQMSFWGAT VITGLFGAIPFIGDSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVALHIWAFHT TGNNNPTGVDVRRTSKDEAARDTVPFWPYFVIKDLFALAVIMVVFFAVVGFMPNYLGH PDNYIEANPLVTPAHIVPEWYFLPFYAILRAFTGDVWVVMFASWITGGIIDAKFFGVL AMFGAIAVMALAPWLDTSSVRSGRYRPMFKWWFWLLVIDFVVLTWVGAMPAEPPYSTI SLIASAYWFAYFLVILPLLGVIEKPEAQPATIEEDFDAHYGKAHTPAE" gene 552271..553122 /locus_tag="RTM1035_02590" CDS 552271..553122 /locus_tag="RTM1035_02590" /note="COG2857 Cytochrome c1" /codon_start=1 /transl_table=11 /product="ubiquinol--cytochrome c reductase, cytochrome c1" /protein_id="jcventer:1101493006646_RTM1035_02590" /db_xref="CDD:42161" /translation="MTMFKTTGIAALVALSLSTGGALAAGGEGHIEDVAFSFEGPFGK FDQNQLQRGLKVYTQVCAACHGLQYVPLRTLGDEGGPQLPQDQVFAYSEQFEVFDPEL DDFRPATPTDHFPAVTSASAPDLSLMAKKRAGFHGPYGTGLSQLFNGMGGAEYIYSLM VGYHEAPECAPEDFTGTYNAAFTAGGYPDECKDEDGHHTVPGSWIAMGQPLWGDDVEY DDGTVATLEQQAEDVAAFLMWTAEPKMMARKHAGLTGVIFLTILSVLLYLTNKRIWAP IKGKKTS" gene 553307..554347 /locus_tag="RTM1035_02595" CDS 553307..554347 /locus_tag="RTM1035_02595" /note="COG3239 Fatty acid desaturase" /codon_start=1 /transl_table=11 /product="putative fatty acid desaturase" /protein_id="jcventer:1101493006646_RTM1035_02595" /db_xref="CDD:33051" /translation="MLDQPHPAPLPPETRAGREWAQLLAKYREPSSPRAAFELAVTVG PFLALWGLAWWALSLSYVLSVVLALCAAPFLLRLFAIQHDCGHGAFFKSRSMNDWLGR VLGVVTLTPYDVWRHSHSIHHSSSGNLGRRGIGDIDTLTVAEYAALTPFQRLKYRVYR NPLVLFGLGPGYIFLLENRLPLGFMGKARYWVSAMATNAALLLVLGLVGWFGGLMPIL LIFLPSTVLAATAGVWLFYVQHQFETTHWEAEENWQLHDAALEGSSHYVLPGWLQWLS ANIGIHHVHHVNSRIPFYRLPEALRDHAQLAEINRMTIRESLANARLHLWDEQGRRLL SFAEAQAVIERA" gene complement(554523..555662) /locus_tag="RTM1035_02600" CDS complement(554523..555662) /locus_tag="RTM1035_02600" /codon_start=1 /transl_table=11 /product="fatty acid desaturase family protein" /protein_id="jcventer:1101493006646_RTM1035_02600" /translation="MIPADKVAQLHRALPFWMSLILLPVAVLGALQGGWTVLLLPMTT WYFFSILDAFLGLYTENADLETRDDQLTWYRAITLIWAPLQFGLLYWLIWYVTGPGDA HLSPLETILLFFGVGVITGTVGINYSHELMHQKNRSERFLGDVLLAMVLYSHFRSEHL LVHHRYVGTPRDPVTARYNEGFHRFFPRVLRQSWQSAFKAEAEMLARRNLPWHDLKNP FFKYWALQGFMALLAVLIGGWIGLGLFFWQAFVAIWQLELVNYIEHYGLTRKHLGGGK YEHVQPRHSWNAAHKASNWLLINLQRHSDHHYKPDRRFPLLQNYTEADAPQLPYGYPV MTMAAMVPPIWRRVMNPRVRRWREMYYPEITNWRPYNRASTPMPR" gene complement(555693..556754) /locus_tag="RTM1035_02605" CDS complement(555693..556754) /locus_tag="RTM1035_02605" /note="COG1194 A/G-specific DNA glycosylase" /codon_start=1 /transl_table=11 /product="A/G-specific adenine glycosylase" /protein_id="jcventer:1101493006646_RTM1035_02605" /db_xref="CDD:31387" /translation="MRYFAEAESLLAWYDTHARDLPWRISPAARAAGAHPDPYRIWLS EVMLQQTTVAAVKSYFLRFTTLWPTVADLAAAEDAQVMGEWAGLGYYARARNLLKCAR VVVRDHGGRFPDTLDGLRALPGIGPYTAAAIAAIAYDQPHVVVDGNVERVMARLYDIH TPLPTAKRALTEAAARLTPRLRPGDYAQAVMDLGATICTPKSPACGLCPWRAPCAARA AGTAQHLPRKQPKTPKPVRHGHAYVARRADGAWLLERRPDSGLLGGMLGWPGSDWGES PLHTPPIAADWQQLEAEARHTFTHFHLRLTVHVAIVPDGVPPERGMFLSDAAFRPTEL PTLMRKVFDLARAALNYAP" gene 556837..557346 /locus_tag="RTM1035_02610" CDS 556837..557346 /locus_tag="RTM1035_02610" /note="COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02610" /db_xref="CDD:46536" /translation="MTSRKAATYGFKRTSALLQTSIRRASESRGFAQSRLLTHWAEVV GDDIAAIARPVEVSYARQGMGATLTLLTTGAQAPMLEMQNEKLRERVNAVYGYNAIAR IRITQTAPVGFAEGQVEFTHRPKVAALPVVAPETLQTATSLAAPVTDDGLRAALERLA RNVLTKSQH" gene 557374..557982 /locus_tag="RTM1035_02615" CDS 557374..557982 /locus_tag="RTM1035_02615" /note="COG1651 Protein-disulfide isomerase" /codon_start=1 /transl_table=11 /product="thiol:disulfide interchange protein, DsbA family" /protein_id="jcventer:1101493006646_RTM1035_02615" /db_xref="CDD:31837" /translation="MKHLIATGALALAMLTGPAVAQEAAPDTSQIVEMTMGPEDAKVT IIEYASFTCPHCANFHKGPLKQLKAEYIDTDKVHFIYRDVYFDRFGLWASMVARCGGP EKFFGISDMIYEQQGEWTQGEPAAIADNLRRIGKVAGLEPDAVEACLNDTEKAKALVA WYQENAEAHGVESTPTLVINEQKYANMAYDDLKAIIEEKLAE" gene 558098..559447 /locus_tag="RTM1035_02620" CDS 558098..559447 /locus_tag="RTM1035_02620" /note="COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02620" /db_xref="CDD:30510" /translation="MKDDNFLREMNARHLWHPMGHPGEQQANAPKIIKSAAGVRITDI DGHDPVDAVGGLWCVNLGYSNDVVKQAISDQLWQLPYYSAFAGSTNPAAIEASYAVQE FFAEDGMTRVFFTSGGSDSVDTALRMARQYHRLRGEPTRTKFLSLKKGYHGTHWGGAS VNGNNRFRITYEPLLPGCFHLPSPYTYRNPFDETDGAKLAEKIAAAMVDEIEFQDPST IAAFIMEPIQGAGGVIVPDASFMKHMRDICDRYGILMISDEVITGFGRTGDWTGARHW GVKPDMMTIAKGITSGYFPVGGVVLGDKVAEVFEKAGPEGSIWTGYTYSAHPVGAAAV VACLSETLRLDTKSNAAVRGTQLYEGVKKLAEKYDIIGDVRGGHGLMMGIELVSDRAK KTPMDAATMKRVHQATYEAGAMVRLGAHNILMSPPLVISEAEVNVILSALDAGFAAA" gene complement(559531..559815) /locus_tag="RTM1035_02625" CDS complement(559531..559815) /locus_tag="RTM1035_02625" /note="COG0330 Membrane protease subunits, stomatin/prohibitin homologs" /codon_start=1 /transl_table=11 /product="uncharacterized conserved coiled coil protein" /protein_id="jcventer:1101493006646_RTM1035_02625" /translation="MDKETYQNKLQAQLDQWKAEIDKLQAQSREASADMQIKYQEQIK ELREKRAEMAAQYDKIEAASIEAWKDFKTGADEAWDNMSKAMKSAWGRFG" gene complement(559940..561478) /locus_tag="RTM1035_02630" CDS complement(559940..561478) /locus_tag="RTM1035_02630" /note="COG1115 Na+/alanine symporter" /codon_start=1 /transl_table=11 /product="sodium:alanine symporter family protein" /protein_id="jcventer:1101493006646_RTM1035_02630" /db_xref="CDD:31312" /translation="MKRYAFPAAAAVGAALLAMPAHAQSVDEKVNQIFASSTGWFVNL IFSNFPGTSFPWIVAWLVIGATVFTLYFGFIQFRAIGHSIALVKGDYSDPNDAGEVSH FQALATALSGTVGLGNIAGVAVAVSIGGPGATFWMILAGLMGMASKFTECTLGVKYRN EYPDGRVSGGPMYYLTKGFAERGVPGGKILAVLFSIFCILGALGGGNMFQANQAHQQI AGIVGAYPGWITGVIFAGVVFAVIVGGLKSIARVTEKVVPFMGILYVGTALIIIVMNA DQIGWAFGQIFEGAFTGLGVAGGMVGALIQGFKRAAFSNEAGVGSAAIAHSAVRTKEP ITEGFVSLLEPFIDTVVICTMTALVIIITGQLVAGPDGNYLLNEAGTAIQTVGGTSGV GLTSAAFGSAISWFPYVLAIAVVLFAFSTMISWSYYGLKAWTYLFGEGETKELVFKVI FCIFVVIGAAANLGPVIDFSDAAIFAMAVVNIIGLYILMPIVKRELDSYLSRLKSGEI KKFE" gene complement(561506..561940) /locus_tag="RTM1035_02635" CDS complement(561506..561940) /locus_tag="RTM1035_02635" /note="COG0589 Universal stress protein UspA and related nucleotide-binding proteins" /codon_start=1 /transl_table=11 /product="universal stress protein family protein" /protein_id="jcventer:1101493006646_RTM1035_02635" /db_xref="CDD:30165" /translation="MSGKFVVGYDGSVSSRRALEFAVDRARAQGGTIVLAHVLEWSPY SFLTASELEERHKRRREEMERAEKAITSTVVAELQDSGMPVETMIRYGNTADLLCRIA KEVNAVQIVIGRDGQSAIGARVFGSVAGALVQTAPVPCTIVP" gene 562199..562645 /locus_tag="RTM1035_02640" CDS 562199..562645 /locus_tag="RTM1035_02640" /note="COG3453 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02640" /db_xref="CDD:33256" /translation="MGQTLLESLMDLRLITQDFTVSPQIEVADVAALVDAGYRSILCN RPDGEDYGQPAFDAVAAAAEAAGLAVRWVPIHSGQMTQAALDEFRVALEEMPKPILAY CRSGTRCTMLWSITRFEDLGADEILRATAKAGYDMSGLVAQLERRQ" gene 562642..563361 /locus_tag="RTM1035_02645" CDS 562642..563361 /locus_tag="RTM1035_02645" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxygalactonokinase, putative" /protein_id="jcventer:1101493006646_RTM1035_02645" /translation="MTDWAAIGHDGACARAFVMQGARIVEQAAAPDQATARAQLLSMP QRVFRIGEGQGDHLPTQVIPQGGRGLAPLVQDTPPDVIDAWVRLLLIGLLQARAQWDG VAWVVGRDLSHWVHLSAGEAVSCQSFVTPRLVRLLGGAVLPSAEAMADTLSRPERLAA HLRGAEVRGDSAAITGHLLAAELAAARPYWLGQSVVLIADGSQAEGLAGALREHGAPV EHVAPESLTASALAALAGVLA" gene 563358..564578 /locus_tag="RTM1035_02650" CDS 563358..564578 /locus_tag="RTM1035_02650" /note="COG1519 3-deoxy-D-manno-octulosonic-acid transferase" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonic-acid transferase, putative" /protein_id="jcventer:1101493006646_RTM1035_02650" /db_xref="CDD:31708" /translation="MSRSLSLSAYLAYARRAGRAGPVPDQVRPPGPLIWAHAVDAARA DTLVHLAERLAAQRRGLHLLLTTSSTTPARTDMAASVIWQTVPEDNLPAAEAFLAHWR PDICVWTGGDLRPALLICASRMATPLYLVDADEENLDRASWRWFPDMPRAVLGLFTEI LTRTEAAARLVRRFGAPERIVTVTGAFQEGAMTLPFNAAEREEMAGLLRSRPIWLASR IHRDELATVLETHREVSRLAHRSVLILVPDDLQDCTEMRATLEAQGWRVAVWSEGEIP SETTQVILADTRGEMGLWYRLAPVTFMGSSLVSGQHGRDPNEPAAHGSAILYGPNVGR YLNRYSRYAEAGAARIVRDSPTLTAAVQRLIAPDQAAVMAHAAWDVASRGAAVTDRIQ DMLLDRLDRLDAAR" gene 564575..565561 /locus_tag="RTM1035_02655" CDS 564575..565561 /locus_tag="RTM1035_02655" /note="COG1663 Tetraacyldisaccharide-1-P 4'-kinase" /codon_start=1 /transl_table=11 /product="Putative Tetraacyldisaccharide-1-P 4'-kinase" /protein_id="jcventer:1101493006646_RTM1035_02655" /db_xref="CDD:31849" /translation="MSLPAYWFTPPDRPGLRARLLTPWALWRARRGGADQVGWRAPVP VISVDMLAAGSVGNLPAVLAVIGQVQRLGFAPVILARGAAGPVRIDPRRHGAEEVGGA ALLAADFAPTWVAPDWAEGARAALAEGSADCLVMMGGLRDPALIKDLSIGVVDAVRGF GNGRCRPAGPLAEPLEAGLARVHLMLTVGPHAAQARFAALWGARISSPVMAGELQPLE TGMDWAGARVLAFAGGEDPALFFAMLRGLGAEPVRFEALATKEAYGPGLLARLEREAS LRRAQLVTTEEDAVRLPLAFRRKVLSLPMRLQVPDLAPLDAALTQVGLRQDK" gene complement(565566..566879) /locus_tag="RTM1035_02660" CDS complement(565566..566879) /locus_tag="RTM1035_02660" /note="COG0612 Predicted Zn-dependent peptidases" /codon_start=1 /transl_table=11 /product="peptidase, M16 family protein" /protein_id="jcventer:1101493006646_RTM1035_02660" /db_xref="CDD:30957" /translation="MIRFVLSFVLLLAALPARAEIEVREITTPGGLEAWLVEDHSIPF VALELRFRGGGSLDPEGKRGVTNLMVGLLEEGAAEMDAQGFARASESLAADFRYSVND DRVSVSARFLTENRDQAVDLLRSSLVEPRFDPDAIERVRAQILSIINASQTDPRDIVG QAFDSLVFGDHPYGSSLDGTIESVTALTRDDILAAHQGALARDRLYVSAVGDITEAEL AALLDSLLGDLPESGAPLPGNVAPNLPGGVKVTDFATPQSIVAFAQPGIDRDDPDFFA AYILNHILGGGGFESRLMSEVREKRGLTYGVYSYLADKDAAQLWMGSVASANDRVAEA ITVIRDEWDRIHTEGVTPEELENAKTYLTGAYPLQFEGNGPIADIAVGMQMEGLPTDY IVTRNDKVNAVTLDDINRVARELLDPETLTFVVVGQPVGLDSTLN" gene complement(566876..568216) /locus_tag="RTM1035_02665" CDS complement(566876..568216) /locus_tag="RTM1035_02665" /note="COG0612 Predicted Zn-dependent peptidases" /codon_start=1 /transl_table=11 /product="peptidase, M16 family protein" /protein_id="jcventer:1101493006646_RTM1035_02665" /db_xref="CDD:30957" /translation="MRHFLAGLTLALLPLAAPVSASTTDQVTHFTLDNGLDVVVIKDH RAPVVTQMLWYRAGSADETPGVSGVAHFLEHLLFKGTKTMEPGEFSATVARNGGSDNA FTSYDYTAYFQRIAADRLELVMRMESDRMTNLQLDEADILTERDVIIEERNQRVENSP GALFREQKNATQYLNHRYGVPIIGWRHEMEALDLDAALDFYRTFYAPNNAILIIAGDV TPDAVRALADTYYGPIPANPALPERARPQEPPQLAERRITMRDARVSQPYVTRSYLAP ERDSGAQEKAAALTLLADILGGGQTSLLAEKLQFQNQTAVQVGASYSGLSLDDTTFDL FVVPAPGVTLEQAEAAMDEALLTFLETGVDAEQLERIKTQFRASETYARDDAGGLANR YGQALTQGLTVADVQAWPAILQATTEEDILQAARDVLDRTQSVTGWLMAPEVTQ" gene complement(568291..568803) /locus_tag="RTM1035_02670" CDS complement(568291..568803) /locus_tag="RTM1035_02670" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02670" /translation="MAMPRKTVLTLLVATFVAGCGGRDDVTLSKIRHTGNGPDEFSII PGKPLQTPEDLASLPAPNPGGANLTDQNPLADGLAALGGNSAGGVAGNGALVNHANRY GATPAIRQTLAAEDKALRQAHGRVDVLRFLPGDDYVQAYRREWLDAYSEEQRLRNRGV LTPASPPPPE" gene complement(568855..569325) /locus_tag="RTM1035_02675" CDS complement(568855..569325) /locus_tag="RTM1035_02675" /note="COG0597 Lipoprotein signal peptidase" /codon_start=1 /transl_table=11 /product="signal peptidase II" /protein_id="jcventer:1101493006646_RTM1035_02675" /db_xref="CDD:30942" /translation="MRIVFWTAFWIFLLDQATKYLVVHAMDLRSLGAIDLWPPFINLR MAWNYGINFGILAGDDPVTRWVLIAVALVIAGAVLWWVHTEPLGRWHRLAAGLLVGGA LGNVIDRLIYGAVADFLNMSCCGFTNPYAFNVADIAVFVGAFGMVLLPSGKKPS" gene complement(569333..570922) /gene="purH" /locus_tag="RTM1035_02680" CDS complement(569333..570922) /gene="purH" /locus_tag="RTM1035_02680" /EC_number="3.5.4.10" /note="COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)" /codon_start=1 /transl_table=11 /product="bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase" /protein_id="jcventer:1101493006646_RTM1035_02680" /db_xref="CDD:41834" /translation="MTDHAPITRALLSVSDKTGLLELGQALAARGVELLSTGGTAKAL RDAGLAVRDVAEVTGFPEMMDGRVKTLHPMVHGGLLALRDNPEHQAAMQAHGIGPIDL LVVNLYPFEETVARGGDYEDCVENIDIGGPAMIRAASKNHGFVTVVVDVADYAPLLAE LDAHNGQTTRAFRQRLAQIAYARTAAYDAAVSTWLAGAIEDAAPRRRAFAGTLAQTLR YGENPHQAAAFYTDGSDRPGVATARQVQGKELSYNNINDTDAAFELVSEFAPADGPAC AIIKHANPCGVARGATLLEAYKHAFDCDRTSAFGGIIALNQPLDAATAEEIAEIFTEV VIAPGADAGAMSIFAKKKNLRLLLTYGLADPATAGRMIKQVSGGYLVQDKDTGHIAAG DLKVVTKRAPDPRELADLLFAWKVAKHVKSNAIVYVKDEATVGVGAGQMSRVDSCRIA ARKAVDMAETLGLAAPLTQGSVVASDAFFPFADGLMTAAEAGATAIIQPGGSMRDDEV IAAADAAGLAMVFTGMRHFRH" gene complement(570947..572701) /locus_tag="RTM1035_02685" CDS complement(570947..572701) /locus_tag="RTM1035_02685" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02685" /db_xref="CDD:34930" /translation="MSTSDPLPERWPERWSRLLNRLAARRAALSRPATAFLSQPEPRS IGYLARGRQLCAGNFVFAGHLIEAPDTLIWKLDPPDAGFAAQLHGFGWLDDLAAAGDA AARARAQEWLWAWIDLYGNGTGPGWTPDLTGRRLIRWISQALFVLSGQPSQASGPFYR SLAQQTAFLARRWQAARPGLPRFEALTGLIYAGLSLEGMHPHLDPALTALARECETQI DAQGGVPTRNPEELLEVFTLLTWAAMALSESGRTAGEAHWRAIERIAPTLRSLRHADG GLARFHGGGRGLEGRLDSALATSGVKTRRTDGFAMGFARLGAGRTSVIIDAAPPPTGA ASSGAHASTLALELTSGRRPLIVNCGSGHSFGPEWRRAGRATPSHSTLVLANGSSARL SNDKRHPDWLSEAPRHVPVNLTKAPDGLRFEGAQDGYLRGHGLTHVRQLDLTLDGRAL VGEDMLLAIEETDKRRFDRALDETRMKGIAYDIRFHLHPDVDASVDMGGAAISLALRS GEIWVFRSDARAALSLQPSVYLEKTRLKPRATKQIVLSGRAMDYATHLRWSLAKAQDT PVGIRDVEEEALDPVADE" gene complement(572797..574065) /locus_tag="RTM1035_02690" CDS complement(572797..574065) /locus_tag="RTM1035_02690" /note="COG0144 tRNA and rRNA cytosine-C5-methylases" /codon_start=1 /transl_table=11 /product="ribosomal RNA small subunit methyltransferase B, putative" /protein_id="jcventer:1101493006646_RTM1035_02690" /db_xref="CDD:30493" /translation="MKKPKLTARSAAAHLLDRVLGEGRLMSDLIAGGALEPLAPADRA RAQRLASETLRGLARADRLLSRHLRKGPPLPVQNVLRLATVELAQGGESHGVVNDAVD IIGQSPRHANLKGLVNAVLRKVAEEAPRSWNDLRQPGLPDWLRGPLVEAWGKGAVTAM ERAHFAGAALDITVKSDPQGWADRLGATLLPTGSLRRSDPGQVSALPGYAEGAWWVQD AAAALPVQVLAPQPGETVLDLCAAPGGKTLQLAAAGAEVTALDLSERRMARVAENLAR TGLEATCRVEDARAHQGGPYDAILLDAPCSATGTIRRHPDLPHAKDGSDFGALITLQA EMLDHALTLLKPGGRLVFCTCSLLPDEGECQVEEALARHPGLTVDRAALAQPGIDPAW ITEEGGLRLRPDYWADLGGMDGFYIACLRF" gene 574135..574326 /locus_tag="RTM1035_02695" CDS 574135..574326 /locus_tag="RTM1035_02695" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02695" /db_xref="CDD:35067" /translation="MTDDTQTPSRDLPPAAQRALAEAEARRKAAEALDLPRELGGRRE GLEPVRYGDWEKKGLAIDF" gene complement(574345..574698) /locus_tag="RTM1035_02700" CDS complement(574345..574698) /locus_tag="RTM1035_02700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02700" /translation="MRVALAVLLILGLAAPAMAEGFAPVTKRDRFVSLIEGRDLTRFG ITLNVTSDGQIKGRAFGRDVTGAWRWNGDYFCRDLYWGSMDLGPNCQAVRVQGNTLRF ISDQGAGQFADLSLR" gene complement(574757..575575) /locus_tag="RTM1035_02705" CDS complement(574757..575575) /locus_tag="RTM1035_02705" /EC_number="1.3.1.26" /note="COG0289 Dihydrodipicolinate reductase" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate reductase" /protein_id="jcventer:1101493006646_RTM1035_02705" /db_xref="CDD:30637" /translation="MTDLPGIVITGASGRMGQMLIRTLAESPRAQLIGALERPGHDWI GQDVGRAMGGAEIGVTVTDDPLEAIARAHAVIDFTAPAATLEFAILAAQARVVHVIGT TGFEAEHLPKLDAAARHAVIIRAGNMSLGVNLLTQLTKRVAAALDEDFDIEIVEAHHN QKVDAPSGTALMLGEAAAEGRGVALERASDRARDGITGKRTRGHIGFSAIRGGDIVGE HDVIFAAAGERIVLRHIATDRAIFARGALKAALWGLGRKPGSYDMIDVLGLGDN" gene 575729..576133 /gene="rbfA" /locus_tag="RTM1035_02710" CDS 575729..576133 /gene="rbfA" /locus_tag="RTM1035_02710" /note="COG0858 Ribosome-binding factor A" /codon_start=1 /transl_table=11 /product="ribosome-binding factor A" /protein_id="jcventer:1101493006646_RTM1035_02710" /db_xref="CDD:31199" /translation="MRGMAKNKFHDGPGPSQRQLRVGELIRRTLSEVLMRGDIHDPDL NRISVTVGEVRTSSDLKIATAYVMPLGGEGQDDLIALLARNKNELRRMIGKKVGLKYA PDLRFRLDETFDQMDETRRLFDQDTVRRDVEG" gene 576144..576878 /locus_tag="RTM1035_02715" CDS 576144..576878 /locus_tag="RTM1035_02715" /note="COG3698 Predicted periplasmic protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02715" /db_xref="CDD:33494" /translation="MLVAVFGSGAGQAAECRAERFEGESYTVCAVDMVRDDLRLFLNS AESGTPLGSFGAIEGKLKAEGKTLVFAMNAGMYHADRSPVGLYVEAGQEMRGLVTRDG PGNFGLLPNGVFCIRDGRADVIETLRFARERPHCRDASQSGPMLVIDGALHPRFLVES DSRYIRNGVGTSEDGRRAWFVISDRAVNFHTFGRFFRDHLRVRQALYFDGKVSRLFAP GLGRSDIGFPLGPMVGAVIDADAAVD" gene 576915..577820 /gene="truB" /locus_tag="RTM1035_02720" CDS 576915..577820 /gene="truB" /locus_tag="RTM1035_02720" /EC_number="5.4.99.-" /note="COG0130 Pseudouridine synthase" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase B" /protein_id="jcventer:1101493006646_RTM1035_02720" /db_xref="CDD:30022" /translation="MARKRKGREISGWLVVDKPAGMTSTAVVNKVKWALQAQKAGHAG TLDPEATGVLAVALGEATKTVPYITDALKAYTFCVRLGQATNTDDTEGEVIAESDRRP TDEDIKALLGSFVGDVMQVPPKYSAVKIDGQRAYKLAREGEEFEVAARPLWVEELLLV DRPDADHAVLEMTCGKGGYVRSVARDLGEKLGCFGHVAWLRRVWSGPFEAEDGLSIED IDKLAHTPELEAHVRPLEEGLADVPMVAATPEGAARLRNGNPGMVIAQGIEYGDECWA AIDGKAVAVGRYKAGELHPSRVFNQ" gene 577817..578392 /locus_tag="RTM1035_02725" CDS 577817..578392 /locus_tag="RTM1035_02725" /note="COG4333 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02725" /db_xref="CDD:34055" /translation="MSGTAPDHLHDPGGKVRLRLPDGVVGGAEYSACGRYRQVLSRDW TADGVAPRRVLFVGMNPSVASAEVSDPTCHREVMFAKDWGYSFYFKGNMLDWRATSPK DLPRDPNEACSEANIPALVAMAEQCEVVVLAFGKLHARYQGVVRQALCEIAATGKPLM CLGLNKDGSAKHPLYLRKDTRLRPFPMPVVG" gene complement(578393..579025) /locus_tag="RTM1035_02730" CDS complement(578393..579025) /locus_tag="RTM1035_02730" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="jcventer:1101493006646_RTM1035_02730" /db_xref="CDD:31227" /translation="MTTAPLVTLERDGGLWIAILNRPDKANALTEAMLTDLAEIAEAA QAARVLILTGAGRVFSAGADLEAVHSGLATSPVWERLSGAIAALPGLSIAALNGTVAG GAMGMALACDIRIAAEGAGAFYPVMKLGFLPQPSDPARLAALIGPARARMILLAGARL STEEALGWGFFDRVVPRDGVLAAAQELAAPALSASAAHATTLKAMCRVMV" gene complement(579022..579771) /locus_tag="RTM1035_02735" CDS complement(579022..579771) /locus_tag="RTM1035_02735" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="20-beta-hydroxysteroid dehydrogenase, putative" /protein_id="jcventer:1101493006646_RTM1035_02735" /db_xref="CDD:40206" /translation="MDMQGKCVLITGASKGIGAAAARVFAAAGAQVALVARNAEAIAE LAGEIGPSAIAIPCDVSRYWEMEAAVAACHTAFGQLDVLINNAGVIEPITSLSEADPE AWARAIDINLKGVFNGMRAALPGMITRGSGSILTVSSGAAHSPLEGWSAYCASKAGAA MLTRCADLEAASAGVRIMGLSPGTVATDMQREIKASGVNPVSQLDWSIHIPADWPARA LLWMCSPDAAEFAGQEISLRDEAIRRRVGLV" gene 579902..581422 /locus_tag="RTM1035_02740" CDS 579902..581422 /locus_tag="RTM1035_02740" /note="COG3210 Large exoproteins involved in heme utilization or adhesion" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02740" /translation="MSYMRTLAASTSVLCLSATAGFADLTAAEVWQDWQSYLESNGYT VTAQTAQAGDTLTIRDLAMRLAVPEEGGTVELRMGEMQLVEQGDGSVAVILPEVMPIA MDLKDETGEQVAITMQVAQKGMEMVVTGDPSAMTYDYAAQEVAFSLNDAVAGADTLEI GIAEVRMADMAGRHQSVLDGGMRAVTQELTAGPVVYEIDFTDTEEGGRAEIQGTMARL SMTGDGDMVDGVDTTDMAAALRAGFRVDSLIDYEEGNTAYTLTSEDGVVEGTQSSQGG QLRVGMGPDGLLYGGEGRDVRMALEGSAMPFPVTAEMARMGFNLLMPVSKSDETQDFA LGLEFGGFTMADSLWAMFDPAAQLPRDPATINVDLSGKGRLFFDLLDPEQMTKLEESD EVPGEVESLVLNDLTVELAGAKLTGAGAFTFDQSDLTSFDGVPAPEGAIDLRLVGGNG LLDTLIGMGFVAEDQAMMVRMMAGMFARTGAGEDELTSRIEVTEDGQVLANGQRLK" gene 581534..582886 /locus_tag="RTM1035_02745" CDS 581534..582886 /locus_tag="RTM1035_02745" /note="COG0312 Predicted Zn-dependent proteases and their inactivated homologs" /codon_start=1 /transl_table=11 /product="peptidase U62, modulator of DNA gyrase" /protein_id="jcventer:1101493006646_RTM1035_02745" /db_xref="CDD:30660" /translation="MPMAKALDELTHALIDAALKAGAESADAIALRGQSITIDMRGGT LEQAERAEGVDIGLRVLIGGRQATVSASDTGAMTIAALAERAVAMAREAPVDPYAGLA DAGQLAKDWDVAALELCDPAPEPAPDALARMAQEAEAAALAVDGVTQVQSATAGYSHR AVHIAASNGFSGGYARSDTGLSCVAIAGTGTGMERDYDGDSRIFASDLRDAAEIGQRA GLRAVERLGARRPRTGAYPVLFDERISGTLIGHLLAAANGASVARGSSWLRGRLGEQV LPKALSVMEDPHRTRVSGSRPFDAEGLPTAKRAIVQDGMLMGWTLDLANARKLGMQSS ANATRGTSSAPSPGTWNIALTQGAQSRDDLIRAMGTGLLVTSMIGSTINPNTGDYSRG AAGFWVENGEIAYSVNECTIAGSLPEMLRRLIPANDARTHLGRVVPSLLIEGLTLAGE " gene 582873..583652 /locus_tag="RTM1035_02750" CDS 582873..583652 /locus_tag="RTM1035_02750" /note="COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family" /codon_start=1 /transl_table=11 /product="inositol monophosphatase family protein" /protein_id="jcventer:1101493006646_RTM1035_02750" /db_xref="CDD:30136" /translation="MPGNDLALLIEAAREAGRIATAYVGGPLEVQDKAGGAGPVTAAD LAVNAMLAEQLRSARPGYGWLSEESEDTTARLAADRVFIVDPIDGTRSFIEGNHNWAH SLAVAQGGVVVAAAIYLPMRDKLYAAAAGEGATLNGLPIRATGRADLVGASILASKPN YAPEHWRDGRVPEVARAFRPSLAYRLSLVAEGRYDAMMTLRPSWEWDIAAGDLILREA GAMTSDRRAAPLRFNNPVPMVDGVLAANPVLHGALHAALAG" gene 583720..584640 /locus_tag="RTM1035_02755" CDS 583720..584640 /locus_tag="RTM1035_02755" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02755" /db_xref="CDD:31041" /translation="MPRSDNLTGALLMMGSMAAFTLNDAMIKALAGQVPLFQVMFLRG LVTTILVALIAWKMGALKRHLPREDWGPVFWRMVGEIGSAYFFVTALYHMPLANISAI MQALPLTLTLAAALFFREPVGWRRMAAIMAGFIGVMLIVRPGTEGFNIYSVYGLAAVA FVTLRDLATRRLSRDVPSMLVTLFNSFFIMAFFGLGSLTGEWVALDGRAALLICGAAV MIIGGYLFSIMVMRVGEISFVAPFRYTSLIWALILGWLAFGDWPQTLTLVGAGIVVAS GLFTLYREAQISRRAKADLKRQLSLGPRPR" gene complement(584579..585397) /locus_tag="RTM1035_02760" CDS complement(584579..585397) /locus_tag="RTM1035_02760" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02760" /translation="MRVIGICRFSYPALGGFKRMHDTVKEREAYLYAPARMELRFRHF ECLTLPSIAAQQNPDFTFLVMIGQNMPKPYLDRLHDLTAPVPQIKIIESEPMKHRLAM QLAIKEELGEDTDLSMQFRLDDDDAVGLSFVRSLRWFEKHTRTMRKSWRHLAIDYNRG YSVTLSDRGIIAEELQAPFWACGLAVLFRPGDPLTVMNFGHHKLHFDMPTLIQPGPHM YLRAKHSDNDSHAKYQTGPMHPIDAREAAFFKSQFNVDEDQVKAVFSNPPWPVG" gene 584942..585409 /locus_tag="RTM1035_02765" CDS 584942..585409 /locus_tag="RTM1035_02765" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02765" /translation="MPPALAHGAGVFLEPAQAAHKAEADRVVIIQAKLHGKVCILAQF FLDRQLHGEAMLHRFAFDDLDLGHRGGQVMQPVQVGFRHVLPDHHQEGEIGVLLGGNR GQGEAFEMAKAQLHPGGGIEIGLALFDSVMHAFEPAQGGIGKPADSDHAHALS" gene complement(585413..586243) /locus_tag="RTM1035_02770" CDS complement(585413..586243) /locus_tag="RTM1035_02770" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02770" /translation="MQGRMENANSQVIGLCRFSYPALGGFQVEHTETAEREAYLYAPE RMQERFRLFEQFTLPPLRAQSDPEFTLLVVIGPNMPRQDHARLMDNLSGLPQARVIVR APGRHRDVMREVINEALIDSDLPSLQFRMDDDDAVSVHFVERLRKLATNARGLLRSNR HVAIDFVNGFVATPTPDGILASATFQHMWTPALALSVRPGVRHTIMNYSHARLWQNVP TLSWPEEPMFVRGHNGYNDSRQKEGVRMPKLSLLDAEGEALFRAQFHIDADNVRASFR " gene 586561..586932 /locus_tag="RTM1035_02775" CDS 586561..586932 /locus_tag="RTM1035_02775" /note="COG0048 Ribosomal protein S12" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S12" /protein_id="jcventer:1101493006646_RTM1035_02775" /db_xref="CDD:48341" /translation="MPTIQQLIRKPRQPKVRTTKSQHLQGCPQKRGVCTRVYTTTPKK PNSAMRKVAKVRLTNGFEVISYIPGESHNLQEHSVVLIRGGRVKDLPGVRYHILRGVL DTQGVKDRKQRRSKYGAKRPK" gene 586945..587415 /locus_tag="RTM1035_02780" CDS 586945..587415 /locus_tag="RTM1035_02780" /note="COG0049 Ribosomal protein S7" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S7" /protein_id="jcventer:1101493006646_RTM1035_02780" /db_xref="CDD:30398" /translation="MSRRHAAEKREVLPDAKYGDRVLTKFMNNLMIDGKKSVAETIVY NALERVEGKIKRAPVEVFHEALDNIKPSVEVRSRRVGGATYQVPVEVRPERREALAIR WLINASRSRNENTMEERLAGELLDAVQSRGSAVKKREDTHKMADANKAFSHYRW" gene 587436..589559 /locus_tag="RTM1035_02785" CDS 587436..589559 /locus_tag="RTM1035_02785" /note="COG0480 Translation elongation factors (GTPases)" /codon_start=1 /transl_table=11 /product="translation elongation factor G" /protein_id="jcventer:1101493006646_RTM1035_02785" /db_xref="CDD:30828" /translation="MARDYPLQRYRNFGIMAHIDAGKTTTTERILFYTGKSHKIGEVH DGAATMDWMEQEQERGITITSAATTTFWQRQEDPGAEGASDTKYRFNIIDTPGHVDFT IEVERSLAVLDGAICLLDGNAGVEPQTETVWRQADRYKVPRLVFVNKMDKIGADFFNC VKMIKDRTGAIPAPVALPIGAEDQLEGIIDLIKMEEWVWKGEDLGASWVRQPIRDDLK DMADEWRANLIEVAVEMDDDAMEGYLEGKEPDEATLRSLIRKGTLSLSFVPVLVGSAF KNKGVQPLLNAVIDFLPSPLDVPPYMGFSPDDETETRNIARHADDAEPFSALAFKIMN DPFVGSLTFTRIYSGQMKKGDAMLNSTKGKKERVGRMMMMHAINREEIEEAFAGDIIA LAGLKETTTGDTLCDPTKPVVLETMTFPDPVIEIAVEPKTKGDQEKMSAGLARLAAED PSFRVETDIESGQTIMKGMGELHLDILVDRLRREFKVEANIGAPQVAYRETISHMVEH TYTHKKQSGGSGQFAEVKLVITPTEPGEGFSFESKIVGGAVPKEYIPGVEKGIRSVMD SGPLAGFPVIDFKVALIDGKYHDVDSSVMAFEIAGRMGMREGLKKAGAKLLEPVMKVE VVTPEEYTGNVIGDLTSRRGQVSGQEQRGNAIAINANVPLANMFGYINTLRSMSSGRA QFTMQFSHYEPVPHNISEEIQKKYA" gene 589644..590819 /gene="tuf" /locus_tag="RTM1035_02790" CDS 589644..590819 /gene="tuf" /locus_tag="RTM1035_02790" /EC_number="3.6.5.3" /note="COG0050 GTPases - translation elongation factors" /codon_start=1 /transl_table=11 /product="elongation factor Tu" /protein_id="jcventer:1101493006646_RTM1035_02790" /db_xref="CDD:30399" /translation="MAKEKFARNKPHVNIGTIGHVDHGKTTLTAAITKYFGEFRAYDQ IDGAPEEKARGITISTAHVEYETEARHYAHVDCPGHADYVKNMITGAAQMDGAILVVN AADGPMPQTREHILLGRQVGIPFMVVYMNKVDQVDDEELLELVEMEIRELLTSYDYPG DDIPIVRGSALHAMNGTQPEIGENSIRALMEAVDSYIPTPARAVDQPFLMPIEDVFSI SGRGTVVTGRIERGVINVGDSIEIVGIRDTKTTTCTGVEMFRKLLDRGEAGDNIGALL RGVDREGVERGQVLCKPGSVKPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTD VTGTVMLPEGTEMVMPGDNLKFTVELIAPIAMEDGLRFAIREGGRTVGAGVVSKIIE" gene 590902..591210 /gene="rpsJ" /locus_tag="RTM1035_02795" CDS 590902..591210 /gene="rpsJ" /locus_tag="RTM1035_02795" /note="COG0051 Ribosomal protein S10" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S10" /protein_id="jcventer:1101493006646_RTM1035_02795" /db_xref="CDD:30400" /translation="MQSQNIRIRLKAFDYRVLDASTQEIVNTAKRTGAQVRGPIPLPN KIEKFTVLRSPHVNKKSRDQFEIRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVQISV " gene 591223..592065 /locus_tag="RTM1035_02800" CDS 591223..592065 /locus_tag="RTM1035_02800" /note="COG0087 Ribosomal protein L3" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L3" /protein_id="jcventer:1101493006646_RTM1035_02800" /db_xref="CDD:40393" /translation="MLRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEK DGYTAVQLGAGTAKAKRTTQAMRGHFAAAKVEPKRKIAEFRVAPEALINVGEEITADH YFEGQFVDVSGTSIGKGFAGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKG KKMAGHMGAVRVTTQNLQVVKTDADRGLIMIKGAVPGSKGGWVTIKDAVKKPFPENAI LPAALRSAAEEAAKAAEAAAAAAAAEAEAEAKRLAEEAAAAEEAALKEAEASIQAEKK EGEE" gene 592062..592679 /locus_tag="RTM1035_02805" CDS 592062..592679 /locus_tag="RTM1035_02805" /note="COG0088 Ribosomal protein L4" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L4" /protein_id="jcventer:1101493006646_RTM1035_02805" /db_xref="CDD:40659" /translation="MKLDVIKLDGGTAGSVDLGEDIFGLEPRADILHRVVRWQRNKAQ AGTHKVKTRSETSYSTKKIYRQKGTGGARHGDKNAPIFRHGGIYKGPTPRSHAHDLPK KVRALGLKHALSAKAKAGALVILDEASSNGKTGELAKQVKNLGWKRVLVIDGAQVNAE FARAAANIEGLDVLPSMGANVYDILKRDTLVITKAGVEALEARLK" gene 592676..592972 /locus_tag="RTM1035_02810" CDS 592676..592972 /locus_tag="RTM1035_02810" /note="COG0089 Ribosomal protein L23" /codon_start=1 /transl_table=11 /product="Ribosomal protein L25/L23" /protein_id="jcventer:1101493006646_RTM1035_02810" /db_xref="CDD:30438" /translation="MSAKPEHYDVIRKPIITEKATMVSENGAVVFEVHMDANKPAIKE AVEALFGVKVTAVNTTITKGKQKRFRGQLGRRNDVKKAYVTLAEGNTIDVTTGL" gene 593164..593922 /locus_tag="RTM1035_02815" CDS 593164..593922 /locus_tag="RTM1035_02815" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02815" /db_xref="CDD:32411" /translation="MQLEIDIAAEAMEDRIASLDLTCFDRGDYVNLILQRSEVMFDRP KSGRIIKAWQEGDDAPIQAVVDEMGDTISRRAAGVIHAEYKLIKSLLQDINPKRIADI GCGYGFFDLFAAQDLGCKVLLIDLEENTHRHFGFNTEGAAYSSLSRAKGLLKANGIKA DRIETLNPMTKPAETAKSVDLVVSFLSCGFHYPVDMYLPFLDKVLRPGGAAIFDLRRS TAKVQAEKLETFGTLTDLDSPPKTRRVMLNKADA" gene 594193..595035 /locus_tag="RTM1035_02820" CDS 594193..595035 /locus_tag="RTM1035_02820" /note="COG0090 Ribosomal protein L2" /codon_start=1 /transl_table=11 /product="ribosomal protein L2" /protein_id="jcventer:1101493006646_RTM1035_02820" /db_xref="CDD:30439" /translation="MALKSYKPTTPGQRGLVLIDRSELWKGRPVKSLTEGLTKNGGRN NTGRITMRRKGGGAKRLYRIVDFKRTKFDISATVERIEYDPNRTAFIALIKYEDGEQA YILAPQRLAIGDKVIASAKADIKPGNAMPFSGMPIGTIIHNIELKAGKGGQIARAAGT YAQFVGRDGGYAQIRLSSGELRLVRQECMATVGAVSNPDNSNQNYGKAGRMRHKGIRP SVRGVVMNPIDHPHGGGEGRTSGGRHPVTPWGKPTKGARTRNKNKASQDLIVRSRHAK KKGR" gene 595039..595317 /locus_tag="RTM1035_02825" CDS 595039..595317 /locus_tag="RTM1035_02825" /note="COG0185 Ribosomal protein S19" /codon_start=1 /transl_table=11 /product="ribosomal protein S19" /protein_id="jcventer:1101493006646_RTM1035_02825" /db_xref="CDD:30534" /translation="MARSVWKGPFVDAYVLKKAEAARESGRNEVIKIWSRRSTILPQF VGLTFGVYNGHKHIPVNVSEDMIGQKFGEYSPTRTYYGHAADKKAKRK" gene 595321..595701 /gene="rplV" /locus_tag="RTM1035_02830" CDS 595321..595701 /gene="rplV" /locus_tag="RTM1035_02830" /note="COG0091 Ribosomal protein L22" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L22" /protein_id="jcventer:1101493006646_RTM1035_02830" /db_xref="CDD:48343" /translation="MGKEKNPRRVADNEAMAKLRMLRTSPQKLNLVAAMIRGKKVDKA LTDLTFSNKRIAQDVKKCLQSAIANAENNHNLDVDGLIVAEAYVGKNLVMKRGRPRAR GRFGALKKPFSELTIKVREIEEQA" gene 595701..596408 /gene="rpsC" /locus_tag="RTM1035_02835" CDS 595701..596408 /gene="rpsC" /locus_tag="RTM1035_02835" /note="COG0092 Ribosomal protein S3" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S3" /protein_id="jcventer:1101493006646_RTM1035_02835" /db_xref="CDD:30441" /translation="MGNKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLAMRKFIG EECKQAGISRVIIERPHKKCRVTIHTARPGVIIGKKGADIEGLRKKLAAMTASELHLN IVEVRKPELDAALVGESIAQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVSGRLGGA EIARTEWYREGRVPLHTLRADIDYAPVEATTAYGIIGIKVWIFKGEIMEHDPGARDRK AQELQDGPAPRGAGGRR" gene 596422..596835 /gene="rplP" /locus_tag="RTM1035_02840" CDS 596422..596835 /gene="rplP" /locus_tag="RTM1035_02840" /note="COG0197 Ribosomal protein L16/L10E" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L16" /protein_id="jcventer:1101493006646_RTM1035_02840" /db_xref="CDD:40349" /translation="MLQPKRTKFRKQFKGRIKGEAKGGSDLNFGTFGLKATQPERITA RQIEAARRAMTRHMKRQGRVWIRIFPDVPVSSKPTEVRMGKGKGSVDYWACKVKPGRV MFEIDGVSEEIAFEALRLAAMKLPIKTRVVVREDW" gene 596936..597556 /locus_tag="RTM1035_02845" CDS 596936..597556 /locus_tag="RTM1035_02845" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02845" /translation="MPNIDSLFVTRLYRAALSEHAPAIDAKELEASCYSIAEDDEAGQ EWCDENGYPGYTSYASLSDLPWRFPIFADLVKVLDAHVAAFAQDLEFDLDGKELKLED IWINILPEGGMHASHIHPHSVISGTTYVAMPDGASALKLEDPRSARMMAAPVRRKDAR QELRTFIYAKPVVGDVLLWESWLRHEVPMNMSEDDRISVSFNYSWN" gene 597766..597972 /locus_tag="RTM1035_02850" CDS 597766..597972 /locus_tag="RTM1035_02850" /note="COG1278 Cold shock proteins" /codon_start=1 /transl_table=11 /product="cold-shock DNA-binding domain protein" /protein_id="jcventer:1101493006646_RTM1035_02850" /db_xref="CDD:40409" /translation="MANGTVKWFNSTKGFGFIAPDNGGKDVFVHISAVERAGLTGLAD NQKVTFDIESGRDGRESASNLQLA" gene 598220..598420 /locus_tag="RTM1035_02855" CDS 598220..598420 /locus_tag="RTM1035_02855" /note="COG0255 Ribosomal protein L29" /codon_start=1 /transl_table=11 /product="ribosomal protein L29" /protein_id="jcventer:1101493006646_RTM1035_02855" /db_xref="CDD:40908" /translation="MNAKELRDKTPDQLREELTNLKKQQFNLRFRAATGQLENPAQMR IARRDAARVLTILNEKANAAAE" gene 598433..598663 /gene="rpsQ" /locus_tag="RTM1035_02860" CDS 598433..598663 /gene="rpsQ" /locus_tag="RTM1035_02860" /note="COG0186 Ribosomal protein S17" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S17" /protein_id="jcventer:1101493006646_RTM1035_02860" /db_xref="CDD:30535" /translation="MPKRILQGVVTSDANAQTVTVSVERRFKHPVLQKTIRKSKKYRA HDENNTFKVGDAVRIIECAPKSKTKRWEVLEA" gene complement(598668..599237) /locus_tag="RTM1035_02865" CDS complement(598668..599237) /locus_tag="RTM1035_02865" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02865" /translation="MFTPSTTALPDFGSTLVIVPFWPLSLPDRTTTVSPFFSLAAILQ HLRGERDDFHEVLGAQLANDRPENTGTNRLTCVVQDHGGVAVKANGGAIFTTDFLGGA HDDGLTDVALLHATARDGFLDRDDNDVAHGCVSTLGTTQNLDALNSASAGVVSNIQVG LHLDHLVSPDLWGAMHCLVPRVSINAKRR" gene 598743..599111 /gene="rplN" /locus_tag="RTM1035_02870" CDS 598743..599111 /gene="rplN" /locus_tag="RTM1035_02870" /note="COG0093 Ribosomal protein L14" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L14" /protein_id="jcventer:1101493006646_RTM1035_02870" /db_xref="CDD:40336" /translation="MIQMQTNLDVADNSGARRVQCIKVLGGSKRRYASVGDIIVVSVK EAIPRGRVKKGDVRKAVVVRTAKEVRREDGTAIRFDRNAAVILNNAGEPVGTRIFGPV VRELRAKNFMKIISLAPEVL" gene 599113..599424 /locus_tag="RTM1035_02875" CDS 599113..599424 /locus_tag="RTM1035_02875" /note="COG0198 Ribosomal protein L24" /codon_start=1 /transl_table=11 /product="ribosomal protein L24" /protein_id="jcventer:1101493006646_RTM1035_02875" /db_xref="CDD:30547" /translation="MAAKLKKGDTVVVLSGKDKGQKGTITNVDPKSGKAVVEGVNMAI RHTRQSQTSQGGRIPKAMPIDLSNLAIVDKNGKPTRVGFKIEGDKKVRYAKTTGDVID A" gene 599417..599980 /gene="rplE" /locus_tag="RTM1035_02880" CDS 599417..599980 /gene="rplE" /locus_tag="RTM1035_02880" /note="COG0094 Ribosomal protein L5" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L5" /protein_id="jcventer:1101493006646_RTM1035_02880" /db_xref="CDD:30443" /translation="MLDTATYTPRLKAHFREAIKPALKEEFGYKNDMQIPRLEKIVLN IGCGAEAVRDSKKAKSAQEDLSTIAGQRAVVTKARNSIAGFRVREDMPLGAKVTLRGD RMYDFLDRLITIAMPRIRDFRGVSGKSFDGRGNYAMGIKEHIIFPEINFDKVDEVWGM DIVIATTAKTDAEAKALLKHFNMPFNS" gene 600000..600305 /locus_tag="RTM1035_02885" CDS 600000..600305 /locus_tag="RTM1035_02885" /note="COG0199 Ribosomal protein S14" /codon_start=1 /transl_table=11 /product="ribosomal protein S14" /protein_id="jcventer:1101493006646_RTM1035_02885" /db_xref="CDD:40350" /translation="MAKKSMIEREKKRQVLVDRFAKKRAALKVIINDQSKPMEERFRA SLKLAELPRNSSATRLHNRCQLTGRPHAYYRKLKVSRIMLRELGSSGQLPGVVKSSW" gene 600319..600711 /gene="rpsH" /locus_tag="RTM1035_02890" CDS 600319..600711 /gene="rpsH" /locus_tag="RTM1035_02890" /note="COG0096 Ribosomal protein S8" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S8" /protein_id="jcventer:1101493006646_RTM1035_02890" /db_xref="CDD:40502" /translation="MNDPIGDMLTRIRNSQMRGKSTVLTPASKMRVRVLDVLASEGYI RGYEMTQDANGHPAIEISLKYYEGTPVIREMKRVSKPGRRVYLGVDDIPQVRQGLGVS IVSTSKGVMSDAAARAANVGGEVLCTVF" gene 600723..601256 /gene="rplF" /locus_tag="RTM1035_02895" CDS 600723..601256 /gene="rplF" /locus_tag="RTM1035_02895" /note="COG0097 Ribosomal protein L6P/L9E" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L6" /protein_id="jcventer:1101493006646_RTM1035_02895" /db_xref="CDD:30446" /translation="MSRIGKKPVPLPSDVTVTLSGQKIEVKGPKATKTFTATDDVTIT IEENAISVMPRGKSKRARQQWGMTRTVIANMVHGARDVFKKELEIRGVGYRAQMAGNV LKLNLGLSHDVDFPIPDGVTVTAPKQTELVVEGTDKQLVGQVAANIRDWRRPEPYKGK GIRYKGEYIFQKEGKKK" gene 601268..601627 /gene="rplR" /locus_tag="RTM1035_02900" CDS 601268..601627 /gene="rplR" /locus_tag="RTM1035_02900" /note="COG0256 Ribosomal protein L18" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L18" /protein_id="jcventer:1101493006646_RTM1035_02900" /db_xref="CDD:30605" /translation="MANSKRKLFLKRRLRVRNKLRKVNAGRVRLSVFRSNKNISVQLI DDVNGVTLAAASTLEKDLGLVGKCNVEAATKIGTAIAERAQKAGITEAYFDRGGFLFH GRVKAVADAAREAGLKI" gene 601640..602206 /gene="rpsE" /locus_tag="RTM1035_02905" CDS 601640..602206 /gene="rpsE" /locus_tag="RTM1035_02905" /note="COG0098 Ribosomal protein S5" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S5" /protein_id="jcventer:1101493006646_RTM1035_02905" /db_xref="CDD:30447" /translation="MAREDNRRDRREREEAPEFADRLVAINRVSKTVKGGKRFGFAAL VVVGDQKGRVGFGKGKAKEVPEAIRKATEAAKRAMIRVPLREGRTLHHDMEGRHGAGK VVMRTAPHGTGIIAGGPMRAVFEMLGVQDVVAKSTGSQNPYNMIRATLDGLRKETSPR MVAQRRGKKVADILKKGDEAPVAEAAEA" gene 602219..602407 /locus_tag="RTM1035_02910" CDS 602219..602407 /locus_tag="RTM1035_02910" /note="COG1841 Ribosomal protein L30/L7E" /codon_start=1 /transl_table=11 /product="ribosomal protein L30" /protein_id="jcventer:1101493006646_RTM1035_02910" /db_xref="CDD:29436" /translation="MAKTIVVKQIGSPIRRPQDQRQTLIGLGLNKMHKTRELEDTPSV RGMVNKLPHLVKIIEERG" gene 602626..603063 /locus_tag="RTM1035_02915" CDS 602626..603063 /locus_tag="RTM1035_02915" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02915" /translation="MSDQCSGGCDHIHTHTKHAPIDNHTCHCSVCKNVTGQDTTHVVF YNHGDVVADNEAGMNRQPFNANNPDGPLELCTCGTCGAPIMLDDKQHRIRVIVPNLMG YGDQIGAASYHAFYDPATGVPKPSDGRPVYAALRPDFVWPPSS" gene complement(603091..604065) /locus_tag="RTM1035_02920" CDS complement(603091..604065) /locus_tag="RTM1035_02920" /note="COG0435 Predicted glutathione S-transferase" /codon_start=1 /transl_table=11 /product="putative glutathione S-transferase" /protein_id="jcventer:1101493006646_RTM1035_02920" /db_xref="CDD:30784" /translation="MGQLVNGKWQDTWYDTESTGGKFVRSTAKFRNWITADGTAGPSG DGGFKAESGRYHLYVSLACPWAHRTLIFRALKGLEDHIDVSIVHPDMLSEGWEFRTDF PGATGDRLYGLPYARDIYLKADPDISGRVTVPILWDAERETIVSNESAEIIRMFNSAF DDITGNTLDFWPKDLRATIEPVNARIYDTVNNGVYKAGFATSQEAYESAVHPLFDSLD WLEGRLGQHRYVMGDNATEADWRLFTTLIRFDPVYHLHFKCNRARIVDYPNLWGYLRD LYQWPGVAGTVNFEHIVRHYHYSHDTINPNRIIPINPVLDFDAPHGRG" gene 604364..604588 /locus_tag="RTM1035_02925" CDS 604364..604588 /locus_tag="RTM1035_02925" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02925" /translation="MRLATILTALLSGTAAYAHPGHLAEVAGHGHWLGAAALGAAIAI GLWSGLRARKERAETQENEDEAADEAPQEA" gene 604585..605853 /locus_tag="RTM1035_02930" CDS 604585..605853 /locus_tag="RTM1035_02930" /note="COG2138 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02930" /db_xref="CDD:48641" /translation="MSMVKTGVMICGHGSRSQSAVDEFSVLADKLPGYLPDDWLMEYG YLEFANPVIRDGLDRLRAAGCERILAVPGMLFAAMHSKNDIPTVLNTYAATHGIEVRY GRELGVDPKMIAAAGARIREAIDRANVKYGEVGVHDTCLVVIGRGASDPDANANVAKI ARLLHEGIGFGWCEVGYSGVTFPLVEPCLQHVVKLGYKRVVVFPYFLFSGILIDRIYG FTDRVADEHPGMQFVKAGYLGDHPKVLETFAERVTEQLSAVPPPNCGTCQYRTQILAI EGGAVQRITPEQRAALAEARGTGHPAFGDVPPPTCVMCKYRTQILGFEAEVGAVQESH HHHVEGQGASAPGSNVADCTLCDTFCTGLCRLEAQAKHHHHDHDHGHHHHHDHDHPHD HHDHDHDHHHAPYPHARHPHGPESARRTKA" gene 605919..606563 /gene="cobH" /locus_tag="RTM1035_02935" CDS 605919..606563 /gene="cobH" /locus_tag="RTM1035_02935" /EC_number="5.4.1.2" /note="COG2082 Precorrin isomerase" /codon_start=1 /transl_table=11 /product="precorrin-8X methylmutase" /protein_id="jcventer:1101493006646_RTM1035_02935" /db_xref="CDD:42540" /translation="MILRPYEKNPSAIYEMSFATVRQEARLDRFGPGMESLAIRLIHA CGMVEVADRLAFSSGAYAAGHAALQAGAPVLCDCEMVGAGIIRRYLPCNNEVIVTLND PRVPGIAAEIGNTRSAAAVELWAERLEGAVVAIGNAPTALFHLLELLDQGAPRPALIL GFPVGFVGAAESKAELADNPRGCEFVALRGRRGGSAMASAAVNALSAGLPEVGA" gene 606560..607771 /locus_tag="RTM1035_02940" CDS 606560..607771 /locus_tag="RTM1035_02940" /note="COG2241 Precorrin-6B methylase 1" /codon_start=1 /transl_table=11 /product="SAM (and some other nucleotide) binding motif:Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin)" /protein_id="jcventer:1101493006646_RTM1035_02940" /db_xref="CDD:32423" /translation="MTTTAEPWLHIVGIGEDGMAGLLPATRAILEAAEVIVGGERHHL LSEAVTAERIAWPSPFDALTGLLAGLRGRRVVVLATGDPLWFSVGARIGRSLPPSEIV YHPQLSAFQLAAARMGWSMADLETLTVHGRPVEQMIAFIQPDARLLILTTGAETPAQI ARFLTERGFGQSRMTVLANMGGAEEARFDGLAESWAHVVPPFNTLAVDCVAAPDAALM PRVPGLADDLFQHDGTMTKREVRAATLAKLMPMRGALLWDIGTGCGSVAVEWMRGARY ARAIGIEPRADRRAMAAANALALGVPRLELIEGRVPEALDGLEAPDAVFIGGGLTEAV FDAAWAALRPLGRLVCNAVTLESEAVLVALYKRHGGELVKLQISRAEPVGGLTGWRPL MPVTQWSLVKR" gene 607825..608526 /locus_tag="RTM1035_02945" CDS 607825..608526 /locus_tag="RTM1035_02945" /note="COG2243 Precorrin-2 methylase" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis precorrin-2 methyltransferase" /protein_id="jcventer:1101493006646_RTM1035_02945" /db_xref="CDD:32424" /translation="MAGKLYGVGLGPGDPELMTLRAHRLIAGATVVAYPALAGGESFA RAIAAGAIAPGAREIVMDVPMSVERAPAQAAYDRGAAEIADALDGGDNVVCLCEGDPF FYGSFMYLFARLSGRYEVEVVPGVTSIAACAARAGRPLVARNERLTVLPGPLPEAELR ARIEGAESVAIMKVGRHLSKIRGVIEGLGLTAEAVYVERASLAEEIVCPLAQAPEKAP YFSMILLTKGADPWL" gene 608517..610334 /locus_tag="RTM1035_02950" CDS 608517..610334 /locus_tag="RTM1035_02950" /note="COG2073 Cobalamin biosynthesis protein CbiG" /codon_start=1 /transl_table=11 /product="Precorrin-3B methylase" /protein_id="jcventer:1101493006646_RTM1035_02950" /db_xref="CDD:31214" /translation="MAVRPVVLVLSRSGEAVAHRVAALIDGDVHGRDGRVDHAAAWFP NALDHARDLFAAGVPVVGVCASGILIRAVAPLLSDKRGEPPVVSVSDDGAVVVPLLGG HRGANRLAAVIAGGLGAVAAVTTAGDVAMGVALDAPPLGYRLANPGDAKAAMAAMLAG EGVRVTGENIFDIKDMGGAVELVVSEAPVAGNDRRLVYHPQRYALGLGCARGCATEEL WDLVCRTLEESGIAPGAIACVASIDLKADEAAMNAVARRLGVPFRLFSAAELEAYAGQ LANPSEVVFAEVGCHGVSEGAALACGGQLVVEKRKTANATCALSRSEAVITEMPGRAR GRLSVLGIGPGQASWRTPEVSRLVAEADELVGYGLYIDLLGPLAAGKSRSDFPLGGEE ARCRYALEQAGQGKSVALICSGDAGIYAMGALVFELLDRGPEAQGVSDAARRVEVVCS PGVSALQAAAARAGAPLGHDFCTISLSDLLTPREDIIRRLNSAAEGDFVIAFYNPVSK TRRTLLSEARDILLKHRPADTPVLLASSLGRPEESLRYRRLADLQVDEVDMLTVVLVG SSNSRLAQLGEGPRMFTPRGYARKIDGDLAEVRTGKALK" gene 610331..611104 /locus_tag="RTM1035_02955" CDS 610331..611104 /locus_tag="RTM1035_02955" /note="COG2875 Precorrin-4 methylase" /codon_start=1 /transl_table=11 /product="Precorrin-4 methylase" /protein_id="jcventer:1101493006646_RTM1035_02955" /db_xref="CDD:32702" /translation="MTVYFIGAGPGDPELLTKKAERIIGQCPVCLYAGSLVPAEVVAG APEGALVMDTAPMTLEDTHAVILDSHTKGLDVARVHSGDPSLYGAIAEQIRKLRADGI DYQIIPGVPAYAAAAAALGQELTVPEIAQSIVLTRVSMKSTSMPEGETLENFARTGAT LAIHLGIRNLREIHRILAPYYGDDCPVVVAYRVGWPDQMFIRGTLADIHAKVRAEKIT RTALIMVGKVLGEITDFKDSALYDPVMPHVLRPKVTAKA" gene 611417..611989 /locus_tag="RTM1035_02960" CDS 611417..611989 /locus_tag="RTM1035_02960" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /protein_id="jcventer:1101493006646_RTM1035_02960" /db_xref="CDD:28977" /translation="MQQTEINAMRSLGADLRALRKARGLTLAALAEMLGRSVGWLSQV ERDLSEPSISDLRQVAEVLGVPMSLLFGHASAPAEEQGYVVRAGARRPMGSGEEGLIE ELLSPDLTDDFEVIHSTFRPRSKMQRPAQRPTQEVGYILSGRLDLSIGARKFTVGPGD SFRFRGEPYAWANPYDIPCVAIWVIAPPVY" gene 612000..612620 /locus_tag="RTM1035_02965" CDS 612000..612620 /locus_tag="RTM1035_02965" /note="COG1280 Putative threonine efflux protein" /codon_start=1 /transl_table=11 /product="Lysine exporter protein (LYSE/YGGA)" /protein_id="jcventer:1101493006646_RTM1035_02965" /db_xref="CDD:31471" /translation="MSYHAWTVFALFWVVFVTTPGPNAVNCITNGMTIGFRRSLWGVL AILTQATLFLSLSAAGVTALIAASPVAFQVAKLIGAGFLIYLGVRGWIMARRPVEAGE APKGSVYWRALAIATINPKSVAGYLAAFSQFVQPDVPIGAQMWVIFPTALSLTTLSYV GYCALGAGLGRAALGAVFNVWLRRGMAACFVIYGVALGSAATPGRG" gene 612617..612991 /locus_tag="RTM1035_02970" CDS 612617..612991 /locus_tag="RTM1035_02970" /note="COG3791 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006646_RTM1035_02970" /db_xref="CDD:33586" /translation="MMHKGSCLCGDVTFVVTAPPEGASACHCGQCRKQSGHVWASAYV ARAELSISGPVSWYAASDIAKRGFCPKCGAFLFWAAHAEDTISFALGALEAPTGLRLE KHIFVKDKGDYYDIADGVPQTD" gene 613003..615447 /locus_tag="RTM1035_02975" CDS 613003..615447 /locus_tag="RTM1035_02975" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="aminomethyl transferase family protein" /protein_id="jcventer:1101493006646_RTM1035_02975" /db_xref="CDD:30753" /translation="MAEFPGTARVVIIGGGVVGASCLYHLAKAGWADCVLLEKNELTA GSTWHAAGNVPTFSTSWSVMNMQRYSTELYARLGAEVEYPMNYHQTGSIRLAHSRERM QEFQRARGMGKYQGMNLDILGVDEITARYPFLETHDLQGALYDPNDGDIDPAQVTQAL AKGARDMGATILRFTPATGVRRENGEWIVATEKGEIRCEYVVNAAGYYAQRVGEWFKP YGGRTVPMMVMSHQYLLTDEIPELEAWSREQGHKLPLLRDVDSSYYLRQEKHGLNLGP YERNCKAHWVKPEDPMPEDFSFQLYPDDLERLEWYIEDAMARVPLLGQAGISKVINGP IPYAPDGLPLIGPMPGVPNAFEACVFTFGIAQGGGAGKVLAEWVTEGATEWDMWACDP RRYTDYTDPEYCVAKGMEVYGHEYAMHFPWHRWPAAPDRKMSPVHDKVKALGGVMGVY NGWERANWFAQPGDDTSEAATQTWDRAGPWEARIREECEAVRDACGVLDLPGFTRLWI EGAGADDWLRGFVTGGLPKVGRMNLVYVADKRGRIVTEFSCIRLQEDSFVLITASTAQ WHDGELVRRALPEGLSLRETTAERDALLLAGPKSREILTGLTDADLSLPWLSHQHASV AGQKAFLARVSFTGELGWEIHAENAAIPAIYEALIGAGVKPFGMFALNSLRIEKGYRA WKGDLSTDYSMLEGGLERFVKFDKPQEFTGKAALLAEKQAGVKKRFVTLIVEAKAADA PYMSTLWHEGQIVGETTSGAWGYRVNASVALGMLRADLAVQGTRIEVEIYGERCAAVV QADAPLWDPENERLRA" gene 615444..616514 /locus_tag="RTM1035_02980" CDS 615444..616514 /locus_tag="RTM1035_02980" /note="COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase, zinc-containing" /protein_id="jcventer:1101493006646_RTM1035_02980" /db_xref="CDD:30949" /translation="MTLPATMRGVILTRHGGPEALEWREDIPLPRPGRGEVLVQVRAA GVNNTDINTREGWYAAEVTGATGETADGVARGGWAGALGFPRIQGGDLCGVVVARGPG VETPALGARVTCPINIPRPTEENPVGFVALGSEIDGAFAEYCLMAASDLYDVSDVPLS DIEIAALPCGFGTALGLLERAGVGPGQEVLITGASGNVGLAAVQIAAAMGARVTGIAA PAKAAMVRADGAAAVIARDAPLPQDHFHAVIDLVGGAGVVALIDALRPGGHYAVAGAI AGPMITVDLRRIYLSDITLHGCTYQAPQVFARLIEMARAGRVRPRIAATYPLRDIARA QADFQAKTHAGKLVLLPPEDKE" gene 616511..617407 /locus_tag="RTM1035_02985" CDS 616511..617407 /locus_tag="RTM1035_02985" /note="COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)" /codon_start=1 /transl_table=11 /product="homocysteine S-methyltransferase family protein" /protein_id="jcventer:1101493006646_RTM1035_02985" /db_xref="CDD:32223" /translation="MTEITLLDGSIGQELVKRSGDRATPLWSTQVMIDHPGIVRLVHD DYFAVGATVASTNTYAVLRDRLARVGLQDEVARLTDVAVGAAVAARDAHGSGRVAGAI GPLVQSYRPDLCPPASEAAALYAENVALLKDRVDLILLETMSSVDQARGGLMAAGLSG LPVWLGVTVMDDDGTRLRSGEALGDLAALVAEFGPEAVLINCTRPESVAAGLEIVKGF GLPFGAYANGFTCISAGFLGAAPTVDALEQRHDLTPAAYAEFAMGWVDQGASIVGGCC EVGPAHIEELARRLRAAGHDIV" gene complement(617508..617834) /locus_tag="RTM1035_03118" CDS complement(617508..617834) /locus_tag="RTM1035_03118" /note="COG3785 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03118" /db_xref="CDD:33580" /translation="MIKTRAKYHLGQVVRHKKHPFRGVIFDVDPQFSNTEEWYASIPE DSRPSKEQPFYHLLAENEQSYYVAYVSEQNLVADYSGEPVGHPDIPDLFGPFEDGHYP LHFQLN" gene 618025..618630 /locus_tag="RTM1035_03113" CDS 618025..618630 /locus_tag="RTM1035_03113" /note="COG4764 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03113" /db_xref="CDD:34377" /translation="MSRTLRALMVLFVLASCGGGGTGYGTAPRNLDHACAILDERPEY ARAFRATERKWGVPAHVQMATIYQESKFISDARTPFRWTLGVIPTGRVSSAYGYSQAL DGTWEEYQRETGRFAAQRTNIADATDFMGWYMAKSNQSLGIPLTDARNQYLAYHDGRT GYARGSFNSKPWLLRVADSVETRSQNYRAQLGTCALGRGLI" gene complement(618656..619261) /locus_tag="RTM1035_03108" CDS complement(618656..619261) /locus_tag="RTM1035_03108" /note="COG2834 Outer membrane lipoprotein-sorting protein" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein carrier protein LolA, putative" /protein_id="jcventer:1101493006635_RTM1035_03108" /db_xref="CDD:32662" /translation="MNKMRFLMVPVLWAAMALPAAAEKLSLPEISNYLNGLRTAQGAF TQINEDGTISTGRILIKRPGRVRFEYDPPEQALVVADGDTVGIIDPRSNDGPVGYPLH RTPLKIILARNVDLTRERMVVGHASDGTSTTVRAQDPANPEYGSIDLVFTGSPVELRQ WVIHDGSGSQTTVVLGDMQRDVRLNDESFVIPGKERMRVDR" gene complement(619344..622304) /locus_tag="RTM1035_03103" CDS complement(619344..622304) /locus_tag="RTM1035_03103" /note="COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins" /codon_start=1 /transl_table=11 /product="cell divisionFtsK/SpoIIIE" /protein_id="jcventer:1101493006635_RTM1035_03103" /db_xref="CDD:31860" /translation="MAYQTRGRDPLLDSNMAEAIEKRGKELLGLVLMAVALMAAAMVV SYTPDDPSWMSATDAPVQNWMGRLGASVAAPLFMIIGWGSWGFAIVLGVWGARMALHR GEDRAMGRLIFAPIWLAILALYAASLTPGAEWAQTHSFGLGGLFGDTVLGALLGILPV GASVGLKLLSLVLGVGVLGMGAFVLGFTRVELQRMGRFLLVGVILCYAALMKAMGRGA GGAAQAGQVMQAMMAERRARRGEAAVARAAVPLRAEPALDGARVRRADPVPLTAQRHA PVAPKPAQPVDKPGGLLARMPMLMRKPEVMPEPELVEAATYEGEAEMPGDDRIRAKIS DVIKARVRQSPAVQIASVAPLTKGRGRGPDPLILNTAPRGVLPPEPPLTARHVVQTPL RAEPLLRAAAAPVSMAAPMLEVTEDDDFDAMIEAFGQDDAPEMAAPAPRIPMPEPRKV VQHAPRKPLQPSSRAMAEAQPALRFEAPAQPVYELPPLSLLADPEHIQRHHLSDESLE ENARMLENVLDDYGVKGEIVSVRPGPVVTMYELEPAPGLKASRVIGLADDIARSMSAL SARVSTVPGRSVIGIELPNDNREMVGFREILSSRAYGDGNQKLPLALGKDIGGDPIVA NLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPEECRLIMIDPKMLELSVYDGIPH LLSPVVTDPKKAVVALKWVVAEMEDRYRKMSKMGVRNIDGYNGRVEEALKKGEMFSRT VQTGFDDDTGEPVFETEEFAPEKMPYIVVIVDEMADLMMVAGKEIEACIQRLAQMARA SGIHLIMATQRPSVDVITGTIKANFPTRISFQVTSKIDSRTILGEMGAEQLLGMGDML YMAGGGKITRCHGPFVSDEEVEEVVNHLKAYGPPTYVGSVLQGPDEDKAESIDAVLGL SSGSGAEGDDLLYDQAVAIVIKDRKCSTSYIQRKLAIGYNKAARLVEQMEDEGVVSSS NHVGKREVLVPEPQ" gene complement(622323..623501) /locus_tag="RTM1035_03098" CDS complement(622323..623501) /locus_tag="RTM1035_03098" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aminotransferase, classes I and II" /protein_id="jcventer:1101493006635_RTM1035_03098" /db_xref="CDD:30785" /translation="MFPERFANLPAYAFPRLRTLLDAHAPGGEVVHMTIGEPKHAFPR WIVDVIAENADGFNSYPVNEGMPELLQAAGDWVGRRYGVTLDPASRIMALNGTREGLY NAMMALSPEVKGGKRPVVLAPNPFYQVYMVAALSVGAEPIFLNATHETGHLPDFAALS EEVLNRVTVAYLCSPANPQGTVASRAYWAELIGLAERYDFRIFADECYAEIYRDTPPV GILEVAQEMGADPERIVAFHSLSKRSNLPGLRSGFVASGPKNIAQMKQLRNYAGSPLP MPLQHAAARLWADEAHVIENRRLYGEKYEIADEILGNLPGYRSPEAGFFLWLPVEDGE AATLRLWQETGVRVLPGAYLSQEAGGVNPGQGYIRVAMVAPKDEMADGLRRLRACLYG " gene complement(623695..624954) /locus_tag="RTM1035_03093" CDS complement(623695..624954) /locus_tag="RTM1035_03093" /note="COG0621 2-methylthioadenine synthetase" /codon_start=1 /transl_table=11 /product="MiaB-like tRNA modifying enzyme" /protein_id="jcventer:1101493006635_RTM1035_03093" /db_xref="CDD:30966" /translation="MSQAPKFTTLGCRLNAYETEAMKELAGQAGLGNAVIVNTCAVTS EAVRKARQEIRRLRRENPEARLIVTGCAAQTEPETFAAMPEVDAVIGNTEKMAADTWA RLAGDFIGETERVLVDDIMSVRETAGHLIDGFGSRSRAYVQVQNGCDHRCTFCIIPYG RGNSRSVPAGVVVEQIKRLVGAGYNEVVLTGVDLTSWGADLPAAPKLGDLVMRILRLV PDLPRLRISSIDSIEVDENLMQAIATEPRLMPHLHLSLQHGDDLILKRMKRRHLRDDA IRFAEEARRLRPEMTFGADIIAGFPTETEAAFENSLRLVEECHLTWLHVFPYSPRPGT PAARMPQVKGPAIKARAARLRAAGEGRVAAHLAAQQGREHAVLMEAPRMGRTEQFTEV VFDRDHPEGQIVRARVTGWQGGQLTAA" gene complement(624951..625784) /locus_tag="RTM1035_03088" CDS complement(624951..625784) /locus_tag="RTM1035_03088" /note="COG0253 Diaminopimelate epimerase" /codon_start=1 /transl_table=11 /product="diaminopimelate epimerase" /protein_id="jcventer:1101493006635_RTM1035_03088" /db_xref="CDD:30602" /translation="MDQLDHTGLPFFKMHGLGNDFVVLDGRGRDLGLTPALIMAIADR HRGIGFDQLAVISQGMGDAHLTFYNADGSTSAACGNATRCIARHLMDESGKARLELST ARGALVAVDAGGGLTSVNMGQPQLDWAEIPLAEAMDTLELPIEGGPVATGMGNPHCTF FVADAEAVPLAQFGPRYEHHPLYPERTNVQVATVIGPDHIRMRVWERGVGVTLASGSS SCATAVAAARRGLTGRAVRVDLDGGTIHVDWREDGVWMTGETAHVASGVFTPAFLAAQ R" gene 625893..625965 /locus_tag="RTM1035_t03125" tRNA 625893..625965 /locus_tag="RTM1035_t03125" /product="tRNA-Lys" gene complement(626152..626679) /locus_tag="RTM1035_03083" CDS complement(626152..626679) /locus_tag="RTM1035_03083" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03083" /translation="MKRLLTTALFTGMTLASVGPVLAMDKTLSGLDVKVDLSAYADNN VLKYWPTLEADLATAIASKVTLNDTADAPRIAVEINKVAIDGDTILPDTGEFNQLEGT VSTFEGLNDAVATNADSLENPDEQIGSYALQMTAVSGDTPAPEGWVTIEPSQDDFYAA LVDAYATTVVERLDD" gene 626928..627524 /locus_tag="RTM1035_03078" CDS 626928..627524 /locus_tag="RTM1035_03078" /note="COG3932 Uncharacterized ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="Exopolysaccharide synthesis, ExoD" /protein_id="jcventer:1101493006635_RTM1035_03078" /db_xref="CDD:45947" /translation="MPKDAAPDHETAADLVEQGWDALTGDYTSVGDIVDTLGRANFAP LLILPALALVSPLSGVPGFTTLCGLIIAAVSLQQMVHRSSLWLPRWSRAARLRTSRVR EVYRWFRIPARWLDRVTRRRLHILVTEPLVILPQLFCLILGAVMPFLELIPFTSSILG VVITALAVGMFVGDGLLVLLGMLLAIGVATGVATLVMS" gene complement(627607..627747) /locus_tag="RTM1035_03073" CDS complement(627607..627747) /locus_tag="RTM1035_03073" /note="COG5510 Predicted small secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03073" /translation="MTRAKLSLISLLFMGVLAGCETVEGAGRDIEDAGQAVTGASQDV QS" gene complement(627831..629588) /locus_tag="RTM1035_03068" CDS complement(627831..629588) /locus_tag="RTM1035_03068" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="signal transduction histidine kinase" /protein_id="jcventer:1101493006635_RTM1035_03068" /db_xref="CDD:33706" /translation="MRLRLAALSGLWTPNLALQLGIGLSLAILPLGFVSVYQTYKVLE ERQALSETALLEQTQQAVSESRDIIQSALSTAETLAITVSVFDTAEATCDAVMARVVE ESPIYSFAGFVDDALSLVCASNGGRQDLSNLASIRSELTGRRTEILMHPLEFIGGIAT VSVAVPVFAAGQFRGTVWIAVPISALNDQLSTVVPDVDLVLFQSEGEIVATAEFSDFR RSVLPASHGLQDLADTGRQTFRDVNQDGNTRDFAVVPIVGDRVLALGSWEPRHRSGLL PGYEGTFALYLPLAMWVITIIVAYIGVNHLVIRHVRRLRSWMRLYAAGRGDLDKARLD NAPEELEVVAEAFRAMTRRLSEQERRLEEDLNEKTVLLREVHHRVKNNLQLISSMLNM QIRATGSLEAKHLLRRVQDRVMALSAIHRYLYLARKLSLVRADKLLEDIIQQLVIVGT LDDRGRQIAVTTALEPVEISPDQSVPLSLLTTEAAINAVKYCGMTSGTDAWINIALKA VSGDRFCLSVVNSRAPDGQPAEGAEVTPIDGSGLGSKLIESFVAQLNGTLEISPQPDR YELHVVFPMTWPTQDEDDA" gene complement(629585..630148) /locus_tag="RTM1035_03063" CDS complement(629585..630148) /locus_tag="RTM1035_03063" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="sigma-24 (FecI-like) protein" /protein_id="jcventer:1101493006635_RTM1035_03063" /db_xref="CDD:31783" /translation="MDSQAPQMDPRDELIGHLPAMRAFALNLTRNSATADDLVQDAVV KAWGNFDKFKPGTNLRAWLFTILRNTYYSLYRKRRREVEDPDGKMAGQLSEKPAHDGH LAMTDFHAAFAQLTDEQREVLVLVGAEGFSYEEAAEMCGCAVGTIKSRTNRARKRLAE LMHLDDEDELAMTDAATMAVVTGTSVA" gene complement(630148..630318) /locus_tag="RTM1035_03058" CDS complement(630148..630318) /locus_tag="RTM1035_03058" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="jcventer:1101493006635_RTM1035_03058" /translation="MEKNRRTKKLTQTIDENLRRAYADTAKEPVPDRFIKLLEQLREQ SGEKQKPSGDDS" gene 630430..631248 /locus_tag="RTM1035_03053" CDS 630430..631248 /locus_tag="RTM1035_03053" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="jcventer:1101493006635_RTM1035_03053" /db_xref="CDD:31783" /translation="MTDTPRQPDLSTQIAEHLPYLRRYARALTGNQQTGDHYALATLE ALLEDRTVFNAGLAPKPALFHAFHKIWMSSGAPIAEADSASSPEARAQWRLSTLTPNT REALLLHSIEGFRVSDIAQIIGGTADEVSTLLSIARTEMTNAISGRIMIIEDEAIIAM DIRAIVEDMGHDVTGIARTRDEAVKLARRDPPDMILADIQLADKSSGIDAVNHILNEL GERPIVFITAFPERLLTGERPEPAFLITKPYSEEQVQSAVSQAMFFASTETLQG" gene complement(631302..631472) /locus_tag="RTM1035_03048" CDS complement(631302..631472) /locus_tag="RTM1035_03048" /note="COG5487 Small integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03048" /translation="MLYWALVFLVVALIAGVLGFGGVASASAGIAQILFVVFLVLFVV AMIARALRGRAP" gene 631644..631973 /locus_tag="RTM1035_03043" CDS 631644..631973 /locus_tag="RTM1035_03043" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03043" /translation="MAQAKSADTSPQDEMDHLSQQISTLREDISAISETLAGLGGTTR DAAVDGARRKVSQLRDASSEQLHAAQHRAEDMGQQAADAVRNQPAAAVGLAVGVGFLL GFLTGRK" gene 631977..632318 /locus_tag="RTM1035_03038" CDS 631977..632318 /locus_tag="RTM1035_03038" /note="COG0344 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03038" /translation="MSGLVSHFRRRARHAARAAAFTVAGVIFGMAGLAFLTVALWILI ATYESALVAHAVIGALYLLLGICFLAFGGQSTGAETAPQPAAPKEPLLQVAEAFAVGL NAGRAARGPRS" gene complement(632324..632737) /locus_tag="RTM1035_03033" CDS complement(632324..632737) /locus_tag="RTM1035_03033" /note="COG1145 Ferredoxin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03033" /translation="MFGPDTMKEPLMPYDETTPPEPPVYIVMDSNILIAEDLCGSLQA AGPCRVLNVPHPDELIRVLDGEARISAAFLEMRYDQVLEAELDRALALRGARIVLTMG EDDEIKVVKQGWAMLVRPFTDDMVRGVLQPLVKGA" gene 632802..633533 /locus_tag="RTM1035_03028" CDS 632802..633533 /locus_tag="RTM1035_03028" /note="COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /codon_start=1 /transl_table=11 /product="cyclic nucleotide-binding domain (cNMP-BD) protein" /protein_id="jcventer:1101493006635_RTM1035_03028" /db_xref="CDD:31008" /translation="MVTDCQNCPLRSRAIFAPMTDAEVAFMQSFKTGELEVEGGATLM MEASNSPQLYTALRGMGLRYKTLLSGERQVINFVMPGDFIGLQAGVMQEMQHSVEATT DMKLCVFDRKRLWALFRDHPDRAYDLTWIAAVEEHLLGESLAILGHMSGIERIARAFV RLFDRGAAIGLTRGADMPLPYRQQDLADALGLSVVHVNKMLKRLREQGAATWQNGRLT LHDRDRLCDIAQLDRDRTPMTRPLI" gene 633637..634653 /locus_tag="RTM1035_03023" CDS 633637..634653 /locus_tag="RTM1035_03023" /note="COG0628 Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03023" /db_xref="CDD:30973" /translation="MAVIVIALILSFAALKIGGDIFAPMTLAIVTGVMLAPVTDVFER IGFSTGLAASTVLILGVSAIGILAILAEPVIWQIAEELPRIQYELRSIIAEFSNLIRG LQEINREVEAALGAAPTPAKDAGEGGSLPSITSALFMAPLVLAQALVFCGTLFFFLLT RKGMYAWLSLWIGTPDDTADILRRFTNAERLVARYFLAISSINAGLGAALGGALLLIN LPGPFVWAMVAALLNFVLYVGPMTVTAGLLVAGIVAFDDLMVLAPPAIFLALNMLEAQ FATPALVGRHISVNPLLIFVSLVFWLWLWGPIGGIIAIPVLVIALALLDIFAVDGEPD KSGP" gene complement(634650..636227) /locus_tag="RTM1035_03018" CDS complement(634650..636227) /locus_tag="RTM1035_03018" /note="COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes" /codon_start=1 /transl_table=11 /product="Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes-like protein" /protein_id="jcventer:1101493006635_RTM1035_03018" /db_xref="CDD:31691" /translation="MTQSRPAQGDTAADAITDLKVLITAEEAYPALERAFLEAQTEIS ACFRVFDLRTRLRSDEARAIGATWFDLVVHTLDRGVSIRLLVSDFDPIAAVHLHRLAS QTLRQIAAVREMAQPEARLDFTVALHEAKSGIFPRVLFYPLVRMKIREMVDRWCHMTK PERERFRVETPRLRSLCRVDDRDQLCFPARLMDLHPATHHQKLAVFDRRLVYIGGLDL NERRYDTKQHRQEPNQTWHDVQVLATGPVAKAAQAHLEGFLAAVARKSAPPPSVPGFL RTLSRRRLSAPMRLSPHTVLREIESAHLAAIAKAERLIYLETQYFRYVPLARALARRA RQCPELRLILVLPAAPEEVAFSSDPGLDGRFGEHQQARALAYLKAAFGPERLVIASPV QPRASDSAARDALEGAPLIYVHSKVSIFDEAEAIVSSANLNGRSMRWDTEAGLHVTRR DQVAEIRAKVMGCWLPKEADASFLDLETAFGAWQGMVGSNSVLPPRHREGFLVDYDSD VAKAIAMPLPGMPEEVV" gene complement(636498..636683) /locus_tag="RTM1035_03013" CDS complement(636498..636683) /locus_tag="RTM1035_03013" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006635_RTM1035_03013" /translation="MLEITGIGGIILLILDIWAIISVVGSGATTGKKVLWVVLILLLP LLGFILWLLFGPRSGRV" gene 636912..637418 /locus_tag="RTM1035_03008" CDS 636912..637418 /locus_tag="RTM1035_03008" /note="COG1873 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="PRC protein" /protein_id="jcventer:1101493006635_RTM1035_03008" /db_xref="CDD:45141" /translation="MKRILATTAIVALSAMPVLAQSDTTDQTAPSATESSDMTTGQSG ANSTPEAKTGATSDTTTNADAATMPELSGEERAALTAEDLQGVALYDSADEHVGEISD IVVTDDGQVEHVIVDVGGFLGLGEKPVAVDFDDITLTHDADSVTSSIQATTSLTVEDF ETMQEWQG" gene complement(637515..638159) /locus_tag="RTM1035_03003" CDS complement(637515..638159) /locus_tag="RTM1035_03003" /note="COG0564 Pseudouridylate synthases, 23S RNA-specific" /codon_start=1 /transl_table=11 /product="pseudouridine synthase" /protein_id="jcventer:1101493006635_RTM1035_03003" /db_xref="CDD:30910" /translation="MSDYDPPTDPLEVLHDDHEIVVVNKPAGLLSVPGKGEHLADCLM ARVRDVFPTALLVHRLDRDTSGVMIFALTPHAQRHLGLQFEKRQTRKTYVARVWGRLE PEVGVVDLPLIVDWPNRPLQKVCHETGRAALTEWRVLRASDEESRVRLSPKTGRSHQL RVHMLALGHVILGDPLYASGAAREHPRLMLHSEELRLRHPDGGAGVKFRAAVPF" gene complement(638257..640704) /locus_tag="RTM1035_02998" CDS complement(638257..640704) /locus_tag="RTM1035_02998" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase/aminomethyl transferase" /protein_id="jcventer:1101493006635_RTM1035_02998" /db_xref="CDD:30753" /translation="MTDLPTQARVVIIGGGVVGCSVAYHLTKLGWRDVVLLERKQLTS GTTWHAAGLIGQLRATANMTRLARYSAELYTGLEAETGVATGFRQVGSVSVALTGERL EELKRNAAMARAFGVPVEEMSPAEINARYPHLNLDGVTGGVWLPTDGQADPANIALAL AKGARNRGARVQERVKVTGIARAGRRVTGVDWQGEDGSAGHIACEMIVNCAGMWGHEV GRMAGTNVPLHACEHFYIVSEPIAGLRQLPVLRVPDECAYYKEDAGKIMLGAFEPVSK PWGMKGIPESFEFDQLPEDFDHFEPILEAAVNRMPMLAEAGIHTFFNGPESFTPDDAY HLGLCPEMDNVWVAAGFNSIGIQSAGGAGHALSLWMDAGERPFDLGDVDVARMQPFQG NKTYLFERSKETLGLLYADHYPYRQKATARGVRRTPFHAQLLAQGAVMGELAGWERAN WYAEAGQEREYRYSWKRQNWFENTAAEVRALREAVGLYDMSSFGKLRVEGAGAEAFLN HVCGADMSVAPGRIVYTQFLNAKGGIEADVTVTRLSETAYLVVTPAATRLADETWLRR HVGAHPVVITDVTAGEGVLAVMGPNARDLLRAVSPDDFSNDAHPFGQARQIEIGMGVA RAHRVSYVGELGWEIYVSADMCGHVFEVLHAAGADHGLRLCGMHAMDSCRIEKAFRHF GHDITCEDHVLEAGLGFAVATGKADFIGREAVLAKRAAGLERRLVQFRLTDPEPMLYH NEPLLRDGEIVGYLSSGAYGHHLGGAMGLGYVPCAGESAEQVLASSYEVDVAGVRVKA EASLKPMYDPKSERVKA" gene complement(<640758..642313) /locus_tag="RTM1035_03125" CDS complement(<640758..642313) /locus_tag="RTM1035_03125" /note="COG0405 Gamma-glutamyltransferase" /codon_start=1 /transl_table=11 /product="Gamma-glutamyltransferase" /protein_id="jcventer:1101493006647_RTM1035_03125" /db_xref="CDD:41089" /translation="MRDFHKPGRSATFSTNGMCATSHPLAAKTAIDILERGGNAMDAA IAGAVLLGICEPQMTGIGGDCFVLFTKPGDPTIHALNGSGRAPAGASAAALRAAGHDT VPLQSAHAVTVPGAIDAFCRLSADHGRLGLDTLLAPTIRYAEEGVPVAPRVAFDWPTA GAALQGHGLTHYMPSGTPPTAGQMFRAPGQAEVLRRIARDGRAAYYEGEVAEDIITTL NALGGTHTAADFANQHSDYTTPVSGEYKGANLVEHPPNGQGATAILLLNILKHFDIAG MDPFGVERTHIEAEATKLAYDARNRFIADPDHMRKLDYMLSDETAAKLAALIDPKRAM AAAKPLTEAVHRDTIYITVVDRDRMAVSLIYSIFHGFGSGIASEKFGVLLQNRGAGFT LEEGHPNELGGGKRPMHTIIPGMLVENGRVTMPFGVMGGSYQSTGHARLVSNLRDFGM DPQSAIDAPRAFADPLGLNLERGYGDAVAQTLADMGHDILHMPGPIGGAQAIYIHDDG VLEGGSDPRK" gene complement(642535..643035) /locus_tag="RTM1035_03130" CDS complement(642535..643035) /locus_tag="RTM1035_03130" /note="COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase)" /codon_start=1 /transl_table=11 /product="anti-sigma B factor, putative" /protein_id="jcventer:1101493006647_RTM1035_03130" /db_xref="CDD:32355" /translation="MIGQDGRPHDDPCQRSRAVIPDPAAQHLTLHTRASNLAVREVLA RTRDWLHACAMPDEACGTVELVLAEALNNIVEHAYPPETPGDIQIALALHPARLVAIL SDQGAALPGLCPPDGLLPEHDVARGALPEGGFGWFLIRDLTDRIDYRRAAGCNHLTLE FHRAPL" gene complement(643032..643370) /locus_tag="RTM1035_03135" CDS complement(643032..643370) /locus_tag="RTM1035_03135" /note="COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)" /codon_start=1 /transl_table=11 /product="anti-anti-sigma factor" /protein_id="jcventer:1101493006647_RTM1035_03135" /db_xref="CDD:41770" /translation="MDLNTTHHPDMTIITVGEARIDAAAAIRFKDAMRAATASGAGPV VLDLGNVTFVDSSGLGAIVAAMKQMGGERRLDLACLTPDVAKVFRLTRMDTVFTIHDD LRSLQSRATG" gene 643465..644637 /locus_tag="RTM1035_03140" CDS 643465..644637 /locus_tag="RTM1035_03140" /note="COG0183 Acetyl-CoA acetyltransferase" /codon_start=1 /transl_table=11 /product="acetyl-CoA C-acetyltransferase" /protein_id="jcventer:1101493006647_RTM1035_03140" /db_xref="CDD:29411" /translation="MQEVVIAGASRTPMGGFQGDFEGVPAAELGGAAIRAALLDAGAE TVDEVLMGCVLPAGQGQAPARQAGFLGGLGEEVPATTLNKMCGSGMKAAMMAFDQIAL GHAEVMIAGGMESMSGAPYLLPKMRGGARLGHAQVVDHMFLDGLEDAYDKGRLMGTFA EDCAEAFQFTREAQDAYALASLQGALDAQASGAFAREIAPVTVRGRKGEVVISADEQP AKARPEKIPTLKPAFRAEGTVTAANSSSISDGAAALVLASRAAAEARGLQVRARIMGH ASHAQAPGLFTTAPVPAARKLLDRLGWSVADVDLWEVNEAFAVVPMAFMHEMGVARER LNVNGGACALGHPIGASGARIMVTLLNALETRGLRRGVAAICIGGGEGTAIAIERV" gene complement(644644..645108) /locus_tag="RTM1035_03145" CDS complement(644644..645108) /locus_tag="RTM1035_03145" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="protease synthase and sporulation negative regulator Pai1, putative" /protein_id="jcventer:1101493006647_RTM1035_03145" /db_xref="CDD:40669" /translation="MSRLTLHRNQTRDLEPLARLLTDKDDLALVNPQASHPFDAREWA LKWVGDLEDETFYLCDENGQEVGFFALRVGVGPEVRHLTYVFVEERMRGGTGEVLLSL AEEAARQLKALTITLKVELDNAPALNLYRKAGYEELSRRRGMATMRRDLEAA" gene 645178..645696 /locus_tag="RTM1035_03150" CDS 645178..645696 /locus_tag="RTM1035_03150" /note="COG1956 GAF domain-containing protein" /codon_start=1 /transl_table=11 /product="putative GAF sensor protein" /protein_id="jcventer:1101493006647_RTM1035_03150" /db_xref="CDD:32139" /translation="MQPKGCMRALALALGPWHRAVMRIDYDHIARTIAALTEGESDAV ALMATVVCEVHHADDRFDWTGFYRVTAPEMLKIGPYQGGHGCLSIPFSRGVCGAAART GTVQLVPDVEAFPDHIACASSTRSEIVLPVRDGAGRLIAVFDIDSDQPAAFTEEDAAR LSEILAAVFGRI" gene complement(645982..646767) /locus_tag="RTM1035_03155" CDS complement(645982..646767) /locus_tag="RTM1035_03155" /EC_number="4.2.1.-" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="carnitinyl-CoA dehydratase" /protein_id="jcventer:1101493006647_RTM1035_03155" /db_xref="CDD:31227" /translation="MTDTPIRTERNGAVLEVTLDRPKANAIDAATSRIMGEVFRDFRD DPDLRVAILTGAGGKFFCPGWDLKSAAEGEAPDSDYGVGGFGGLQELRGLNKPVIAAI NGIACGGGLELALSADIVLAADHATFALPEIRSGTVADAASVKLPKRIPYHIAMELLI TGRWFDAKEAAHWGLVNHIHPADRLMDEARAMAQTIAAGPPLVYAALKEIVREAEAMR FQDAMNRITRRQFETVDTLYASEDQKEGARAFAEKRDPVWKGR" gene complement(646764..648812) /locus_tag="RTM1035_03160" CDS complement(646764..648812) /locus_tag="RTM1035_03160" /note="COG1042 Acyl-CoA synthetase (NDP forming)" /codon_start=1 /transl_table=11 /product="CoA-binding protein" /protein_id="jcventer:1101493006647_RTM1035_03160" /db_xref="CDD:31244" /translation="MTQDLSRLLRPASIAVIGGGTWCANLIRQSVAMGFAGPVWPVHP TKAQIGGARAYPSLSALPGVPDAVFVGVNRDATIATIAQLREMGAGGAVCFAAGFLEA EAELGDGAEMQARLLHAAGDMPIIGPNCYGFVNYLDGALLWPDQHGGQRCKSGVAILT QSSNIAINLSMQARGLPIAYLMTVGNQAQLGLSALGRALLEDPRVTALGLHIEGVGDL RAFEALAEAARRAGKPIVALKSGRSDQARAATQSHTASLAGSGAGAAALLARLGIAQV TSLPQMLETLKLLHFAGPLPGNAVVSISCSGGEASLMADTALDHALTLPPLTPTQSRA LRAALGPRVALANPLDYHTFIWGDVPAMAATFAAALDGPADIGVMIADFPRPDRCDPS AWDCIFEAGAEAQRRVGKPLALIATLPDCLSESVAERAIASGLIPLAGLDDGLTAIAR AAWLGQARSTPLPLLLPGTPTQPRTLTEAEAKAALAAHGLRIPQARRAATPAELTATL SDMALPLVIKAEGLAHKTEAGGVIFVHHADDLAEAQAKARAMPCQSWLIEEMIAAPIA ELLIGVLRDPAHGFVLTLGAGGTLTEILRDTTSLLLPVTEADLTQALSHLRAAPLLGG YRGQPTANHAAILRAVMAVQDYVIAHAATLEEVEINPLLCTASDAVAVDALITKGERP " gene complement(649084..650244) /locus_tag="RTM1035_03165" CDS complement(649084..650244) /locus_tag="RTM1035_03165" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_03165" /db_xref="CDD:29658" /translation="MHFGLTDEQEMIVGAVRRFVENEIYPHEPLVERSGEVPPEVAQA IKQKTIDLGFYACNFPEAVGGAGLSHLEFALVERELGRGSMALTHFFGRPQNILMACT GEQIERYLLPAVRGERMDALAMTEPGAGSDVRGMKCAARRDGGDWVLNGTKHFISGAD HADFVIVFVATGEDQTDKGPKKRITTFLVDRGTPGFTIRDGYKSVSHRGYKNMVLEFD DCRLPDAQVLGEVDGGFAVMNEWLYATRITVATMAVGRARRCFDHALRYAAEREQFGQ AIGKFQGVSFQLADMITEIDAADLLTLNAAWRLDQGLPANREIASAKLYASEMLARVT DATLQIHGGMGLMDDLPIERFWRDARVERIWDGTSEIQRHIISREMLRPLGA" gene complement(650246..651655) /locus_tag="RTM1035_03170" CDS complement(650246..651655) /locus_tag="RTM1035_03170" /EC_number="1.1.1.35" /note="COG1250 3-hydroxyacyl-CoA dehydrogenase" /codon_start=1 /transl_table=11 /product="bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase" /protein_id="jcventer:1101493006647_RTM1035_03170" /db_xref="CDD:31442" /translation="MTRTAAIIGGGVIGGGWAARFLLNGWDVRVFDPDPEAARKIDAV LANARHALPMLYDVALPAEGHLTFHTTLSETVMGADWIQESVPERLDLKHKVFQALQE HCDAGAIIGSSTSGFKPSELQGGAARPEQIVVTHPFNPVYLLPLIELVTTEKNSPALI TRAKDILTSLGHFPLHVRREIDAHIADRFLEAVWREALWLVKDGIATTEEIDNAIRYG FGLRWGQMGLFETYRIAGGEAGMKHFIDQFGPCLSWPWTKLMDVPELTDELAQMIADQ SDAQSGHLSIRELERKRDNNLVAMLRALRQQGNAAGRLINQHQQTIKTTLTDGPPITS ARRVIPADWTDYNGHMNEGRFGQLFSDAADAVMTHVGADTAYIAGGLSYFTVENTISF LAEAHAGEHIRVETRVTQGEGKKLRCFHEMKRESDGALLATSDQFMLHVDLKSRKSCD PRADVLARVVALAKQHKEA" gene complement(651655..652416) /gene="fabG" /locus_tag="RTM1035_03175" CDS complement(651655..652416) /gene="fabG" /locus_tag="RTM1035_03175" /EC_number="1.1.1.100" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-ketoacyl-(acyl-carrier-protein) reductase" /protein_id="jcventer:1101493006647_RTM1035_03175" /db_xref="CDD:40206" /translation="MSQRVVITGGASGIGRRLAERFAARGDRVAICDADGDAVALMQA DHPLMIARQADVTNEAQMTAFLGHVEDTWGGADVLCANAGTGGPAGRIEDLDYAAWQA CVGVNLFGTFLACRWAARVMRAQGAGLILITTSTSGLHGVPYRTPYVAAKWGLVGLTK TLAMELGPAGVRVNAIAPGAVEGPRMERVVEMEARASGRTEDEVRTLYARGTSLRTWV TADDLADMALFLASPAASKVTGQILAVDGHTESMV" gene complement(652413..653327) /locus_tag="RTM1035_03180" CDS complement(652413..653327) /locus_tag="RTM1035_03180" /note="COG3246 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03180" /db_xref="CDD:45746" /translation="MPLTMNREVFITCAVTGSGTTQDKSPHVPRSPKDIAESAIAAAK AGAAVVHCHVRDPETGAPSRDLKLFRELTDRIRDSDTDVVLNLTAGMGGDMIFGGVES PLPLSPKGTDMAGATERVAHVAECLPEICTLDCGTMNFAEADYVMTNTPGMLQAMGRM MTELGVKPEIEAFDTGHLWYAKQLVKDGILEPDALVQLCMGVPWGAPDDLNTFMAMVN NVPDTWTFSAFSLGRHQMPYVAASVLAGGHVRVGLEDNLMLDRGVLATNAQLVEKAKG IIEGLGARLMTPAEVRQKLRLTKRAPRG" gene 653406..654353 /locus_tag="RTM1035_03185" CDS 653406..654353 /locus_tag="RTM1035_03185" /note="COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006647_RTM1035_03185" /db_xref="CDD:34583" /translation="MLEWTKSPNAPVRIALLLFDRFSNLCLANCLEPLRAANTLGPRR GFDWQILTLDGAPARSSSGIEVLAHGGLGALTACDYLFVLASYDHDRHDTAAARRALQ AAARRAGVTVGLDSGPWLLASAGLLDGRRATVHWDLLDAFTERFLTVTPERARVLRDG TRMTCAGAMSALDLTLGLISDHLGMAVRLDVEALFLHDDPPVTPTREDVAVGDPLVRR ALGLMRDHVERPLSLSDLARRLSCQPRTLDRRFRAGLGAPPGAVYRHLRLAAARKLVE NTRLGMAEIALRSGYESPAALTRALRRQYGTTPRALRHG" gene complement(654360..654863) /locus_tag="RTM1035_03190" CDS complement(654360..654863) /locus_tag="RTM1035_03190" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03190" /translation="MTEQQGTGRTKPWVRALLVASLALNLAVAGLAAGWALRHGGDHA GHHPSRLDMAGGPLTRALSDADRRAIGRAMRDAWRSRTNNGPNIGESFDALVIDLRAV PFNADRVAAQMRTQRDGFAARFEMGQEVLLTHLAAMSDADRAAYADRLEAQIAEYRAK REKHRKD" gene complement(654863..655219) /locus_tag="RTM1035_03195" CDS complement(654863..655219) /locus_tag="RTM1035_03195" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03195" /translation="MSDKDQDIGGLGAFFDAARAHPPAPSAELLARVLSDAEAEQVWI TRRTEAARAAPRSGLLEQLYRLLGGWPAMAGLTTAVVAGVWIGTTLPEGLSGSNEAAY LVDITPEAVFELAGDF" gene complement(655209..655802) /locus_tag="RTM1035_03200" CDS complement(655209..655802) /locus_tag="RTM1035_03200" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="RNA polymerase, sigma-24 subunit, ECF subfamily protein" /protein_id="jcventer:1101493006647_RTM1035_03200" /db_xref="CDD:31783" /translation="MRMPFDAMEDLPDDALLARFADGDGMAARLLTLRLTPRVMAHAY RLLGNRTEAEDVAQEALLRLWRQAPDWRPGEAKVSTWLYRVVANLCIDRRRRARGGNL PLDAIPEPEDEQASAAERMQDRARADALQSALDQLPERQRQAVVLRHIDGLANPEIAE IMDVTVEAVESLTSRGKRALSALLAGRQEELGYVDER" gene complement(655877..656368) /locus_tag="RTM1035_03205" CDS complement(655877..656368) /locus_tag="RTM1035_03205" /note="COG5126 Ca2+-binding protein (EF-Hand superfamily)" /codon_start=1 /transl_table=11 /product="EF hand domain protein" /protein_id="jcventer:1101493006647_RTM1035_03205" /db_xref="CDD:28933" /translation="MQKTVLMVGLTAAILAGGLSVAQADSHKGKMGKGMGMQHSFEEL DADADGKITPEEMANHMQARFEGADSDGDGALSKDELVARMTERQAERMAAYADHMIE RHDANKDGTLTPDEMQARNKGKMFEKMDADGDGAISEEEFSQMRAQHGKHHGMMKDKK ASE" gene 656593..656982 /locus_tag="RTM1035_03210" CDS 656593..656982 /locus_tag="RTM1035_03210" /note="COG1405 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03210" /translation="MGDTTMTQTDRALWPAVRRGFSRKCPNCGSGPLLSSYLKLRDTC PVCREDLSHARADDGPAYLTILIVGHLMAPLLHIAFVQFRPEPLVLFTIFAIGTIALS LYLLPRLKGAIVAFQWARLMHGFKESH" gene 657004..657696 /locus_tag="RTM1035_03215" CDS 657004..657696 /locus_tag="RTM1035_03215" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family protein" /protein_id="jcventer:1101493006647_RTM1035_03215" /db_xref="CDD:40389" /translation="MTAIDKTAIRDAATVIVLRDPERPHVLMGQRGAEAAFMPNKFVF PGGAVDAGDAEIPLVRPLPPLCAARLTEDCERDLSHAIAAAAIRELWEETGLALGMPG AWPGDVPGDWQGFAARGLVPVADPLQFVFRAITPPGRPRRFDARFFLVHAEALAGDPD DFSAACEELSHLQWIPLEEARRFDLPFITEVVLAEVTARAHDRNPPVSVPFFRNDDEE SLFLRLKGAASG" gene complement(657911..658813) /locus_tag="RTM1035_03220" CDS complement(657911..658813) /locus_tag="RTM1035_03220" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03220" /db_xref="CDD:32580" /translation="MEPWIFLSIAAAAFQTLRFMLQKHLSMGALSAGGATLARFFYSA PFVVALSLAYLAATGAAWPGYTPLFWAYAISGGLAQILATWCVVALFAERNFAVGITF KKTEVVQTALVGLVILGDRITWLGLGAILLGLIGVLILSETPGFEGRWWRRFGNRAAA LGLASGAFFAVSAVGYRGATLEIASADPLLRAGLSLMMVTVMQAVALTLWLMWREPGQ VGRVIAARRTAVWMGLTGMAGSLCWFTAFTLQNAAMVFAVGQVEVIFSLFASVLFFGE RITRREGWGIALITLSVIAVVALR" gene complement(658847..659920) /locus_tag="RTM1035_03225" CDS complement(658847..659920) /locus_tag="RTM1035_03225" /note="COG0462 Phosphoribosylpyrophosphate synthetase" /codon_start=1 /transl_table=11 /product="ribose-phosphate pyrophosphokinase" /protein_id="jcventer:1101493006647_RTM1035_03225" /db_xref="CDD:30810" /translation="MLSGVNITNLSYCTAGDPIMPATSQPKLISGNANLPLATAIARR MSMHRGVNVGLVDARVERFNDQEIFVEVYENVRGEDMFIIQPTSNPANDNLMELLIMA DALRRSSAARITAVIPYFGYARQDRRSKARTPISAKLVANMIVEAGVERVLTMDLHAA QIQGFFDIPVDNLYASPIFALDIMTQFKGRMQDVMVVSPDVGGVARARELAKRITAPL SIVDKRREKAGEVAEMTVIGDVTDKICIIVDDMCDTAGTMCKAAEVLMENGASEVHAY TTHGVMSGPAVERITKSVLKSMVITDTILPTEAVRATPNIRIIPTAPVFAQAILNIWN GTSVSSLFDTPTLEPVYEGQFGG" gene 659927..660565 /locus_tag="RTM1035_03230" CDS 659927..660565 /locus_tag="RTM1035_03230" /note="COG3917 2-hydroxychromene-2-carboxylate isomerase" /codon_start=1 /transl_table=11 /product="2-hydroxychromene-2-carboxylate isomerase" /protein_id="jcventer:1101493006647_RTM1035_03230" /db_xref="CDD:48571" /translation="MLRQSDAAKERAEMAHIDYYFSTLSPYAYLAGAGLEEIAARHGA SLSYKPLDIMALFARTGGAAPADRHPIRTAYRNQELPRQAKKRGMALTLKPAFWPTNP APSSYAIIAAQAAGGGDLGGLVQSILRACWAEERNIAEDEVIRDCLERAGFDPALADK GLLSGAETYAANLEEAVAAGVFGAPFYVVDSGQSFWGQDRLEDLDLHLAGKL" gene 660639..661382 /locus_tag="RTM1035_03235" CDS 660639..661382 /locus_tag="RTM1035_03235" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="hydrolase, alpha/beta fold family protein" /protein_id="jcventer:1101493006647_RTM1035_03235" /db_xref="CDD:40647" /translation="MAIHCSLSHSGSWGPLARELGGALRLTAFDLPGHGQSAAWTGDG EIQAVSTAMAAGLLEAPTDIIGHSFGATVALRLAVERPDLVRTLILYEPVFFAVGLHD QPGLRAGHEAEMAEYAAGMAAGDFLRAAEGFTRVWGDRRGWTALPEGARAAMAAQMPL IEAATDALYGDAGGMLSSGALTRISVPVLLMEGSASPAIIAAINAGLMARIPEALRVV VQGAGHMGPISHARGVAEEIRGFLGDLQG" gene complement(661441..664308) /locus_tag="RTM1035_03240" CDS complement(661441..664308) /locus_tag="RTM1035_03240" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03240" /translation="MRHLIGLIGALLMLGTIPAQAERGALSAHVFGNSLVHHLSDDPS TNVPYWLARLAQAEGRDLTLSGQWGFLRDFATQGIAPNWSFDGVTARRGAADTVLITP ANFIQYQSPDAAFEGDNPDNASPVSATVEVIDRATADWPGARIVIYEGWPDMGGFTRG FPPSDRNLRRWHGYALSDYHDWFRDYVAALQAARPSIEITLLPVSSVLSGLQTGLLED IPVEALYSDDAPHGTATQYFLAALVAYSALYETPAPTGFALPDILHPLVRDTYPRLTE EVAQALGLRDTTQASPPAQAVATAGISSGAGLANPSLGMGLNGIADWSSQHPFVDVMK TARPWVGHSADQWGAFTTEALLAGGYLDAFGWPLALPDGAKALEAFILTDQPAAATHL NGRYVLRYTGTGVIRVVGRADNVRYDYGKREVRFDVTPGDGPVALSLLETDAADPLRD ITVVREDQLALHDLGVIFNPLWIEKVADLRVIRFMDWMFTNGAPQVTWEDRPLPQDAT YVWRGAPLEVMVALANQIGADPWVNMPHMADDGYIRGSAAYLRDHLAPDLKAHVEYSN EVWNFMFPQTVWARDQALALWGDAAGDDAWMQFAGLRAAQMADIWRAEFTGQENRLTI VVGTHTGWPGLEEPLLMAPLALAQGQLTAPPVTRFDAYAVTGYFGFDLGGEDQLGTIQ GWIATSAAIARAKAVELGADPEAYLAAHRYDLAYDLAAEALRQGSLGELLRDILPYHA GIAAQHGLRLVMYEGGTHVVGHGAVVENDALTEFFVGFNYSPQMGVLYDELLSGWTAA GGTLFNAFVDVAAPSKWGSWGALRHLDDTTPRWDALMRANAQAPEWDADRAAGTFLHG RTEVAGPEGARLEGTAKADILLGAAGDDVLVGNGGHDRIHGGAGRDLAILPGDRETYG IGRDGARVILEGPQGAVVLVDVETVEFADTPGQAVALSDLM" gene 664474..664974 /locus_tag="RTM1035_03245" CDS 664474..664974 /locus_tag="RTM1035_03245" /note="COG3786 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03245" /db_xref="CDD:33581" /translation="MTPDDLVLTPLGLRFRGRRYPCTIGRGGVSARKREGDGATPVGA HRIVGLLYRPDRMARPTDWAVPIRPGDLWSDDAGDEDYNLMVRAPYPHSHEVLRRADP LYDLVLITDWNWPQAVRGRGSCIFVHRWRRPGYPTAGCIGLRPDHLLHIAQQITFGAR LIVPPR" gene complement(664978..665367) /locus_tag="RTM1035_03250" CDS complement(664978..665367) /locus_tag="RTM1035_03250" /note="COG1881 Phospholipid-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03250" /db_xref="CDD:32065" /translation="MRLLSLSLAALALSATTAAAEFTISFDWGNIPACRTGKPNTVGS PAFVLRGVPAGTTSIEFSLKDRDAPNYNHGGGRLKVGSDGQLPFGAFKYKSPCPPGGV HTYVWTATARADKKVLARATASRQYPE" gene complement(665449..666102) /locus_tag="RTM1035_03255" CDS complement(665449..666102) /locus_tag="RTM1035_03255" /note="COG0325 Predicted enzyme with a TIM-barrel fold" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03255" /db_xref="CDD:30673" /translation="MGLSEIRARMDKACTAAGRAPQDVELIAVSKVQPAERVAAVLDQ GHRVFGENRVQEAAGRWPAFQDRYTDIVLHLIGPLQSNKARQAMEMFQAIHSVDRPKI AQGIARLAQEMGRCPDLFLQVNTGEEPQKAGVLPQEIDGFVAECRALDLPVKGLMCIP PVEEEPSLHFALLAKMAARNGLSGLSMGMSGDFESAIAQGATHVRVGSAIFGERDYG" gene 666215..666718 /locus_tag="RTM1035_03260" CDS 666215..666718 /locus_tag="RTM1035_03260" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03260" /translation="METIPDGAMTHSRFKIFGLTLASLVLLSGCGAFQNATLDPEAMR VKGGRERQAAANEGSLLDSFRGARDTVKVNRFLWTASLQVLDFLPIEAADPFTGVIST GYGTPPGGGQAYRATILISDPALDARSLNVALQTRGGSVDAATERAVEDAILNRARQL RINAARF" gene complement(666699..667337) /locus_tag="RTM1035_03265" CDS complement(666699..667337) /locus_tag="RTM1035_03265" /note="COG1230 Co/Zn/Cd efflux system component" /codon_start=1 /transl_table=11 /product="cation efflux protein" /protein_id="jcventer:1101493006647_RTM1035_03265" /db_xref="CDD:31423" /translation="MAGCCGHEAQFDGLSAAYKQRLWIVIALNAAMFGVEMAAGQAAQ SQALKADALDFLGDALTYGLSLAVIGASLRVRATAALFKGLSLMAMGLWVLGSTVYRV IYLGVPQAEIMGSIGFLALMANVASVLLLRAYKDGDANVRSVWLCSRNDAIGNVAVMV AALAVWGTETGWPDLIVAGLMAGLFVNSSQQIIRQALTERRHAKGVLRTAPH" gene 667412..667864 /locus_tag="RTM1035_03270" CDS 667412..667864 /locus_tag="RTM1035_03270" /note="COG0789 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="putative transcription regulator protein" /protein_id="jcventer:1101493006647_RTM1035_03270" /db_xref="CDD:29689" /translation="MFLSIGELSARTGVKVPTIRYYESRGLIAVPLRSAGNQRRYGRA ELERLGFIRHARDLGFSLEAIAALIELQDHPDRGCGSATRIAQGQLGAVREKIRRLRA LETELARIAEGCTGEGAARDCYVLASLADHDLCRRDHPAEARSSTQRS" gene complement(667825..669066) /locus_tag="RTM1035_03275" CDS complement(667825..669066) /locus_tag="RTM1035_03275" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03275" /db_xref="CDD:30787" /translation="MKILFIHQNFPGQYKHLAPLLAQQGHNCVALTLRVKEAMKWQGV QVIPYALPKRNGQSLHPWLVDLDTKVTRAEACWQAAVDLRAKGYTPDLILAHPGWGES LFLRDVWPTAKLGLYCELYHLAGYPHLNFDPEFASKNIEAEALRIRMKNINNHLHFET GHAGISPTRFQADTFPSPFRERITVSHDGIDTVQAAPLPDVRLTIEGQCDVTRADEVI TFVNRNLEPYRGYHVFMRALPRLLRERPNATVLIVGGDEVSYGARPPKGQTWKQIFID EVRAQISDEDWARVRFLGRIPYDQFLRLLQVSRVHVYLTYPFVLSWSLMEAMSCSAAI VAGDTAPVREVITHGETGRLVDFFDREALVDEICALLEDAGTRAQLGKTARELIRARY DLRGICLPRQLRWVEDLASAG" gene 669216..671903 /gene="leuS" /locus_tag="RTM1035_03280" CDS 669216..671903 /gene="leuS" /locus_tag="RTM1035_03280" /EC_number="6.1.1.4" /note="COG0495 Leucyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="leucyl-tRNA synthetase" /protein_id="jcventer:1101493006647_RTM1035_03280" /db_xref="CDD:30841" /translation="MSRYAASDVEAKWQSAWEAADVFRARRDETRPKYYVLEMFPYPS GRIHMGHVRNYTMGDVVARYKIATGHNVLHPMGWDAFGMPAENAAMASGGHPKDWTYA NIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLEHGLVYRKNAVVNWDPV DMTVLANEQVIDGKGWRSGADVERRELTQWFFRISDHAEDLLEALDTLDNWPAKVRLM QENWIGKSRGLQFAFGLIDGPEGHDRVEVYTTRPDTLMGASFVGISPDHPLAKRLEAE REDVAAFCAEARKGGTTAEAIEKAEKLGFDTGLRVRHPFDTAWELPVYIANFILMDYG TGAIFGCPGHDLRDHDFARKYDLPIVDTFLPVEGDHDIQAAPYVPLKSEAVRYTRLVA GNEIQTGETGVNAAIDFCEANGVGQGVTKFRLRDWGLSRQRYWGCPIPVVHCDTCGVV PEAKENLPIRLPDDVTFDAPGNPLDRHPTWRDCACPRCGAPARRETDTMDTFVDSSWY YARFTAPHAATPTDMAEAEYWMNVDQYIGGIEHAILHLLYSRFFARAMQITGHLPQKA IEPFDALFTQGMVTHSIYQYLDNSDLGSQGDEPLSAQPLRTEFLFPEDVIEFTDSFGE KKAIKRSVAVANGEEAVDVRQLENIWLIEGEAGRRVQIIPSAKMSKSKKNVVDPSTII AQYGADTARWFVLSDSPPERDVEWTASGAEAAHRHLSRVWRIAAEIAASDAPATPEDD TLLREMHKCIDEVTKGIDSFGFNAAIARLYAFTNTLAKSQAGTGAKTTAARTLAQLMS PMTPHLAEDIWAMLGGEGLIATAPWPVADPAMLIDETVILPIQINGKRRGEITVPADM PKSEVEKLALAHNAVVKALDGAQPKKIIVVPGRIVNVVV" gene 671920..672381 /locus_tag="RTM1035_03285" CDS 671920..672381 /locus_tag="RTM1035_03285" /note="COG0528 Uridylate kinase" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="jcventer:1101493006647_RTM1035_03285" /translation="MSGLALLAGCGFAPAYGPGGAGTALMGRVVVEAPDTRASYLLTQ EIETRLGRPANPRYALIPVVTLNTQAMAINRNNVASRFNLLGTVAYSLRDLETGVIVT SGEVTSFTGYSATGTTVAVQAAERDAEARLMAILADQVLTRLLAADLPQPE" gene 672378..673406 /locus_tag="RTM1035_03290" CDS 672378..673406 /locus_tag="RTM1035_03290" /note="COG1466 DNA polymerase III, delta subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03290" /db_xref="CDD:31655" /translation="MKLSPRDAVRYFAKPEAQRTGILIYGADAMRVALRRQEMLAALL GPTADAEMRLTRLPAGDLRKDPAALLDAVKAQGFFPGPRAAFVEDANDTAADAILAAL SDWQAGDAQIIVTAGALKATSKIRKAFESHPNAYAVGIYDDPPSREEIEATLARAGLR DVPGPVMADLTALARDLDPGDFRQTIEKLALYKLGDATPLNAADIAACAPASTEADLD DILNIVAEGRSAEIGPVMRRLKAQGTQPVGLCIGATRHFRALYTAASDPGGAAQGIAR MRPPIFGPRRDRMLRQAQGWGAERLQQALTILTDTDLTLRSAGQRAPDMALVERALIR LAMLATAR" gene complement(673589..674818) /locus_tag="RTM1035_03295" CDS complement(673589..674818) /locus_tag="RTM1035_03295" /EC_number="2.5.1.9" /note="COG0307 Riboflavin synthase alpha chain" /codon_start=1 /transl_table=11 /product="riboflavin synthase subunit alpha" /protein_id="jcventer:1101493006647_RTM1035_03295" /db_xref="CDD:30655" /translation="MIIISGATKSGEATVYKLVLGLLDITHNSELRARQKTLLRLRDF VSPGGLLRADTAAFNKVIDQKDPQKLVFRMQGELSKELAAKFLEHGVRVIRVSRDAAG IADAIMRHATHSRLFDDPEYMHFATTVEKEHAIAQARVSLRSNGSWAQLGNALDLKFE HLVADPTEALSSLARFLGLNTTSEIFSRSLGALTDILDQPLRDGNLPGEFHGLIYAQG RVLAAEQDKQGQWSASVETYAPSPVQDALGAAELIAHDGVAFQPLKIARMNGVLSWEI NSLNGFGHDGSWQVGDLINLEPISVFGDELGGQTGKGRPSGTAMLMERRVVDSRQVMR LMVQDIPMDSFFYNQSIMIDGISLTIADFVGDQEIEVNLKEHTLSRTTAAKWEPGRRV KLEPDRLSTIFFPPKVA" gene 675127..675714 /locus_tag="RTM1035_03300" CDS 675127..675714 /locus_tag="RTM1035_03300" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /protein_id="jcventer:1101493006647_RTM1035_03300" /db_xref="CDD:30970" /translation="MYDVIGSRASRAFRVLWLLEEMGVGYNHMAVAPWSPEALAANPS GKIPALRDGDAVLTDSAAIMTYLADKHGQFTHAPGTVARARQDALTHQILDEIDGTLW TAARHSFVLPEEHRVPAVKDSLKWEYERNLARLSDALTGPFLQGETMTIADILLVHCL MWAGKAGFADPDDKLKDYMAMMVERPACQRAAALP" gene complement(675690..676862) /locus_tag="RTM1035_03305" CDS complement(675690..676862) /locus_tag="RTM1035_03305" /note="COG2081 Predicted flavoproteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03305" /db_xref="CDD:32264" /translation="MTDALVIGAGPAGLMAARELARAGLRVVVTEAKPSVGRKFLMAG KSGLNLTKAEPFEEFLAAYGPGADALRPMLAAFGPDAVQDWSRALGQEVFTGSTGRVF PTVMKASPLLRSFLSELKGLGVEIRTRWRWCGWDNGAIFDTPEGTQRLHPTVTVLACG GASWARLGSDGAWAAHFDAATLAPFRPANMGFLVAWSPHMAAQFGQPVKGVELRAGAL RSRGEFIISNQGLEGGGIYEVSAALRDGAPLTLDLLPDLTPSEVAQRLARTKTSDSLK NRLRKAFRLDPVKLALVMEFGRGASDLPALLKGLPVPLSGPRPMDQAISTAGGVQLSA LDAGLMLRDHPGVFAAGEMLDWEAPTGGYLLTACLATGLWAGQHAAAFAQGSAAAR" gene complement(676859..678190) /locus_tag="RTM1035_03310" CDS complement(676859..678190) /locus_tag="RTM1035_03310" /note="COG3264 Small-conductance mechanosensitive channel" /codon_start=1 /transl_table=11 /product="mechanosensitive ion channel family protein" /protein_id="jcventer:1101493006647_RTM1035_03310" /db_xref="CDD:33075" /translation="MDGQPEIIGQALGYAMQGWDLAKGWLLSPAAWSQFGLLVVAWLL AVLITRRIRPALARFLTPPAEQENIIASARRFILMFLPLLMPLLAYGLTGIGEGVTRS IFGTGDVIAFGKRLFLVLAARLFVREILTDPFLRALGRFVLMPVALLYLFDLLGLANE KLAAISVDLGNISFSALALIRGAVSGALLFWLGRWSNSQSEDFIKRQQELRPATRELA MKASQIVIFGAAFLLLMSIMGIDLTAIAVLGGALGVGIGLGLQQIAANFVSGVILLLE GQTTVGDYVVLDDGSEGTIVKMTARAAILETVDGRWIVVPNEDFITSRVVNYSDAGKR HRYEAAFSVSYDTDITRIPALIEPAVAAVPEVLKDGKHAPECELKAFGESGVDFSVEY WVDGIEDVTGKYQSDVLFAIWNALRAEGVEMPYPQRVVHHRGLPTPAIPAA" gene 678292..678558 /locus_tag="RTM1035_03315" CDS 678292..678558 /locus_tag="RTM1035_03315" /note="COG1403 Restriction endonuclease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03315" /translation="MRPIPPEARQSLHHLVPKLKGGKGGPVVRLHQICHNEIHATLTE GELARSYATVEALRAHPRLAKFIAWVAQRPPGFQSKTPGARRKR" gene complement(678562..679605) /locus_tag="RTM1035_03320" CDS complement(678562..679605) /locus_tag="RTM1035_03320" /note="COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="oxidoreductase, aldo/keto reductase family protein" /protein_id="jcventer:1101493006647_RTM1035_03320" /db_xref="CDD:31011" /translation="MQNRPLGRTGIEVSALCLGSMTWGSQNTPAEGHAQIDRALERGV NFIDTAEMYPTTPISAETTGRTEEIIGEWFAASGRRADVILATKHSGKGFKHARDGAP ITAGSIPQAIEGSLRRLKTDHIDLYQFHWPNRGSYMFRQNWAFDPSAQNRDETIAHMQ ETLEALQREVARGTIRAFGLSNESAWGMAQWLRLAEAGHGPRAATLQNEYSLLCRLYD TDLAELSVNEDVGLLAFSPLAAGLLSGKYQHGALPTGSRMAINGDLGGRKTPRAFEAV AAYHAVAQKHGLDPVQLALAWCLTRPFLASAIFGATDMDQLDLALGAADITLAPEVLS DLDATHKAHPMPF" gene complement(679833..680480) /locus_tag="RTM1035_03325" CDS complement(679833..680480) /locus_tag="RTM1035_03325" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /protein_id="jcventer:1101493006647_RTM1035_03325" /db_xref="CDD:30970" /translation="MEHSVILRGYRYSVYNRIARVVLHEKGVAYETDEIDPFAPDVSE DYLKRHPFGRVPVLSHGEFDVFETSAISRYVNAAFGGPELMPAKAKTLARVTQVVSIV DSYGYRPMVRQVFAHRVFRPAAGEWADEAEIRAGIDASHVVLSALNSIAKEGGILDGQ SFTLADCHLAPMIAYFVQAREGANALKAYSKLADWWAAVSQRESLHATEPGLPSN" gene complement(680729..681262) /locus_tag="RTM1035_03330" CDS complement(680729..681262) /locus_tag="RTM1035_03330" /note="COG0222 Ribosomal protein L7/L12" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03330" /translation="MKLARAIHFDESDQRVYHSPARTGEWCISGGFEFSNWSEADLTG KSRQAFANGWLGVETFGRVTFVAVTQVEEVEIAALTQALAQHFVDIYGAPDLAAALPV AREEVAQMADLCEDHTPNTLLTVIRELTEAGVRETFSVIEAQDAGLEQFALHGSLDDD HGHDHDHGHGHGHGHKH" gene complement(681259..681966) /locus_tag="RTM1035_03335" CDS complement(681259..681966) /locus_tag="RTM1035_03335" /note="COG0340 Biotin-(acetyl-CoA carboxylase) ligase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03335" /db_xref="CDD:30688" /translation="MTTPSFPPLMSGRAVTGATHPFDMACTLAAEGCDAGLIVHNLTA NHLMAAIVLAPEVPLAEAMVMLPTCGVGFQNAFGALAPPEVAVHLEWSGGLRLNGASC GRLRVAAGGTDPEVEPDWLVIGLDLPLMQIAERPGDQPDQTSLYDEGCAELDPVELLE AWARHSLVWINTWEDAGPRALHAEWRGLAWRMGEEITQNGRTGTFQGVDDRFGMLLRE GDTTHLIPLTTLLETQS" gene complement(681963..683027) /locus_tag="RTM1035_03340" CDS complement(681963..683027) /locus_tag="RTM1035_03340" /note="COG0489 ATPases involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="Mrp/NBP35 family protein" /protein_id="jcventer:1101493006647_RTM1035_03340" /db_xref="CDD:48367" /translation="MALTRESVLEALKKITDPVSGSDIVAAGVMRALTIDGGTVRFVL EIDPAKAQAYTPVRDAAEAAVTALAGAESVSVVLTGHSTKAPPDLKPSRKAEPKGPEK VPGVNHLIAIASGKGGVGKSTVSANLACALAAEGRRVGLLDADVYGPSQPRMLGVSGR PASPDGKTILPMRNHGVTMMSIGLMTNEGQAVVWRGPMLMGALQQMLMQVQWGALDVL LVDLPPGTGDVQMTLAQKAQVDGAIIVSTPQDVALLDARKGIDMFNQLHVPVLGMIEN MSTHICTNCGHEEHVFGHGGVRAEAEKLGVPLLAEIPLHLDIRVASDGGAPIVVSKPD SPQAQAFREVARHLINAGLA" gene complement(683029..683223) /locus_tag="RTM1035_03345" CDS complement(683029..683223) /locus_tag="RTM1035_03345" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03345" /translation="MSDDFNMSMRKFLKQVGVTSQQAIEDGLRKKGATAGQEFTAKVV LTVDGLDIEHTVTGIIKGQD" gene 683248..684066 /locus_tag="RTM1035_03350" CDS 683248..684066 /locus_tag="RTM1035_03350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03350" /translation="MLDADIGGFLGLGMCLLVTPYTRLSRIAMLWLATLLWLMPDLAQ ADDKRFRLSAPVVLVESGLLGYLVPRFALKTGVRVEVVAEASEAEIILGQEEGRAVFE GVGAVWRMGVAGTHPGAALFADWLTSEIGQRTVTSYEVAGVAPFGLPQVVEEAEAAAV FDGDPALGKEVSLLQCGRCHVVAPENRMGAIGSTPSFAVLRTFADWDARFQSFFALKP HPAFTQVAGVTQPFASHLPSPISPIEVTLDELEAIIAYVAGLAPADLGAPIQVQ" gene complement(684060..686015) /locus_tag="RTM1035_03355" CDS complement(684060..686015) /locus_tag="RTM1035_03355" /note="COG1145 Ferredoxin" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin, iron-sulfur binding protein" /protein_id="jcventer:1101493006647_RTM1035_03355" /db_xref="CDD:31343" /translation="MPKHLILCDCSASQTLDPEGLSKATGLSCSRLHSALCTDEIEAA TKAITTGEAIICCAQEARLFEDLAADLEVDSPPLIDLRDRAGWSDDPASKLPKMAALL AEASLPTPPQKTVDVISEGLCLILGASDVALPAAEKLAPLLGVTVLLTDETDPPENRD FDAIRGRITQASGALGQFELRIDALQQINPAGRGALRWTAPRDGGQTHCDVLLDLRGG TPLFPAPQKREGYLRADPGSLHAVSDAVFQAAQMIGTFEKPLYVALEPLICAHSRAEQ TGCSKCLDICPTGAISPDGDHVSIDPMICAGCGACAARCPSGAITYDAPPPDMTFRRI QTLAQAYRKAGGTAPRLLVHDTPHGAEMIRLAARHGRGLPADVIPLEVSALAGFGHAE ILAALASGFAEVAILLAPTTERDALDQEVPLAQAMAGAGTVHLLDLTDPDALCDALYG AAPPAPLASPVLPMGSRRQVARLAAKSLNPSGGTLPLPTSAPYGAVLVNTESCTLCLS CVSLCPSGALMDNEDKPQLRFQEDACLQCGICATICPEKAITLEPRMNLDDTALTQVV LNEEEPFACVECGTLFGSKATINRITEKLAGKHAMFATSDAARMIQMCEGCRINAQFN SANNPFAMGDRPRVRRTEDYLTKRKDH" gene 686364..686969 /locus_tag="RTM1035_03360" CDS 686364..686969 /locus_tag="RTM1035_03360" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03360" /translation="MHDRVTYRHETQMLEKQMMVPLGIVMRRTPGVTRWAAWAWRAVS VLPGAPQADWRELRREGEAVDFHAATVLLDLHHTQTEAYLQGLSARVPSVFVIMRNRP NADLERAPYEVVLVTASPFEAQDYADNGDDIVEKVPMPEGLVALVRDFVEAHHQEEAF QKRRRDKQADGRAQDGIGDARIVQPRDVFATPERMRRGRLN" gene 686966..687598 /locus_tag="RTM1035_03365" CDS 686966..687598 /locus_tag="RTM1035_03365" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03365" /translation="MSRASDFWSRRKARVEAEAQDEARAAEQLAAAAREAELEEKTDA ELCEELGLPDPDALKMGDDFRVFMDKAVPERLRRRALRRLWVSNPVLANLDGLNDYAD DYTDAAMVVPGMKTTYQVGKGMLAHVQEMARQAEALARGPAEADVVAVADEPELVEVA EVEAAPDPDAGSETSGAFAEAETVAAQDDTPLPPRRRMRFQFDEQAGVSA" gene 687595..688215 /locus_tag="RTM1035_03370" CDS 687595..688215 /locus_tag="RTM1035_03370" /note="COG3381 Uncharacterized component of anaerobic dehydrogenases" /codon_start=1 /transl_table=11 /product="cytoplasmic chaperone TorD" /protein_id="jcventer:1101493006647_RTM1035_03370" /db_xref="CDD:33188" /translation="MSQAEALKAQEPEIAAEDALRADLYDFLAAILARPPGEALLAQT AALNGDATPMGQAVSALARVAGVSKPAGVEREFNALFIGLGRGELLPYASYYLTGFLN EKPLAGLRRDMAARGMTRAQNVYEPEDNIASLMEMMAGLIRGRFGKPATLADQQAFFA KHIGPWAGHFFTDLEAAQSSVLYASVGAVGRVFMEIEAQGFRMSGA" gene 688270..688461 /locus_tag="RTM1035_03375" CDS 688270..688461 /locus_tag="RTM1035_03375" /codon_start=1 /transl_table=11 /product="Twin-arginine translocation pathway signal" /protein_id="jcventer:1101493006647_RTM1035_03375" /translation="MTRKTEAGSSRRDFLKLAATGAPAVAVATMVTTGEAQAAEPDLT SDRMQDTAHTRAYFESARF" gene 688561..691446 /locus_tag="RTM1035_03380" CDS 688561..691446 /locus_tag="RTM1035_03380" /note="COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing" /codon_start=1 /transl_table=11 /product="Twin-arginine translocation pathway signal" /protein_id="jcventer:1101493006647_RTM1035_03380" /db_xref="CDD:29448" /translation="MLRKKTNGVARRPQRTSILSEVAGTSVDRRAFLRGSGLAIGGLA AIGAMGGTVTRANAQSAATAAVQTVKSVCTHCSVGCTVVAEVQNGVWTGQEPGWDSPF NLGAHCAKGAAVREHAHGERRLKYPMKKEGGEWKRISWEQAINEIGDGMMKIREESGP DSVYWLGSAKHNNEQAYLFRKFAAYWGTNNVDHQARICHSTTVAGVANTWGYGAMTNS YNDIHNSKAIFIIGGNPAEAHPVSLLHVLKAKEENNAPLIVCDPRFTRTAAHADEYVR FRPGSDVALVWGILWHIFENGWEDKEFIRTRVWGMDQIKDEVNKWTPEETERVTGVPG EQLRRVARTLANSRPGTVIWCMGGTQHTNGNNNTRAYCILQLALGNMGVAGGGTNIFR GHDNVQGATDLGVLADTLPGYYGLAEGSWAHWARVWGEDMDWLKSRFSDATYADTKMM NLSGITVSRWIDGVLEDKENMDQPNNVRAMVLWGHAPNSQTRGKEMKTAMEKLDMLVV VDPFPTVSAVMNDRTDGVYLLPATTQFETRGSVTASNRSLQWRDKIMDPLFESKVDHE ILALFAQKFGFHDRMFRNIAIDEAGEPNVEDITREFNKGMWTIGYTGQSPERLKLHMA NQHTFDRTTLRAKGGPADGDYYGLPWPCWGTAEMNHPGTANLYDMSIPVSKGGLTFRA RFGVERDGDNLLAEGVYSAGSEIQDGYPEFTMQMLMDLGWDGDLTADERAAIDAVGGP TANWKTDLSGGIQRVAIKHECAPFGNAKARAVVWTFPDPVPLHREPLYTNRRDLVADY PTYEDRKAWRLPTMYASIQQKDFSQEYPIILTSGRLVEYEGGGDETRSNPWLAELQQD MFVEINPRDANNIGVRDGAQVWVEGAEGAKVKVMAMVTERVAEGVVFMPFHFGGHFEG KDLRGNYPAGADPYVLGESTNTAQTYGYDSVTQMQETKATLCKIMPA" gene 691459..692055 /locus_tag="RTM1035_03385" CDS 691459..692055 /locus_tag="RTM1035_03385" /note="COG0437 Fe-S-cluster-containing hydrogenase components 1" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin, iron-sulfur binding protein" /protein_id="jcventer:1101493006647_RTM1035_03385" /db_xref="CDD:30786" /translation="MARAKFLCDAERCIECNACVTACKNEHEVPWGINRRKVVTINDG SPGERSISVACMHCSDAPCMAVCPVDCFYQNEEGIVLHSKDLCIGCGYCFYACPFGAP QFPQAGNFGSRGKMDKCTFCAGGPEENHSEAEFQKYGRNRIAEGKLPICAEMCSTKAL LAGDGDVVSAIYRERVVARGFGSGAWGWGSAYGQQSGG" gene 692187..693398 /locus_tag="RTM1035_03390" CDS 692187..693398 /locus_tag="RTM1035_03390" /note="COG2864 Cytochrome b subunit of formate dehydrogenase" /codon_start=1 /transl_table=11 /product="Formate dehydrogenase, gamma subunit" /protein_id="jcventer:1101493006647_RTM1035_03390" /db_xref="CDD:32691" /translation="MRAILSLALCFLLALPAMAQDTPTATGPDRSATGGAQTLDDILA RQRGEQIDDSFRRNATGNADDAAGMAGQLGTLGGASDAEVWRALRYGLDDVKVSAGGP EARVLIQDGGMTWLEFRKGPLATYGAYLLGGTLVLLALFYLVRGKIRIDGAKTGRTVT RFQAVERFGHWLMAGSFVVLAITGLVVLFGRTVVIPLLGHEAFATIAVASKWVHNNIS WAFMLGLVMVFFMWVLHNIPNRTDLKWLAVGGGIFSKGVHPPAKKFNAGQKMIFWAVI VFGASISATGLSLLFPFEMPMFAKTFVMLNQTGLPQAVGFGELPVMLAPHEEMQLATL WHSIMAFVLTAIILAHIYIGSVGMEGAFDAMGSGEVEEQWAREHHGLWLKELQEKGHA PDPGKAAHPAE" gene 693401..694711 /locus_tag="RTM1035_03395" CDS 693401..694711 /locus_tag="RTM1035_03395" /note="COG2319 FOG: WD40 repeat" /codon_start=1 /transl_table=11 /product="WD domain/cytochrome c family protein" /protein_id="jcventer:1101493006647_RTM1035_03395" /db_xref="CDD:29257" /translation="MGARAFGLWLWALAGASPLAAQEFTTLKGHGGPVMGLSVLPESG EVVSVSFDNSVGLWEGRTPRWFEGHAAAVVAVAALEDGRLVSGGDDFTLIVWDRETGE GTRHVGHKGKVAALDVSPDGAWIASASWDGSIGIWPVAGGAARFLTGHDAAVSDVAFS SDGAVLYSSSADGSLQEWRWQEVDAPPRELLNQGFGINKILLGPQDAWLAYGAVDGAT RVIDPASGQQIADFTLERRPVLSMAYHAATAQLAAGDGQGYIMVIDTNAWQIARDFQA MARGPVWALDFSPDGRMIYAGGLSEVVYGWPVEMLGAYDPAGETDHSFLRAPEEMENG ERQFMRKCSICHALTPPPSRKAGPTLYGLFGRQAGTVPGYAYSDILDGAGIVWNDTTI DALFDLGPDHYIPGSKMPMQRITAAEDRQDMIDYLRRATATEGN" gene 694716..694853 /locus_tag="RTM1035_03400" CDS 694716..694853 /locus_tag="RTM1035_03400" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03400" /translation="MKAMIAAFIACAVISAAAPTVLHELGYTSEAKRAGDAVRLGDAA E" gene 694850..696211 /locus_tag="RTM1035_03405" CDS 694850..696211 /locus_tag="RTM1035_03405" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="two component, sigma54 specific, transcriptional regulator, Fis family protein" /protein_id="jcventer:1101493006647_RTM1035_03405" /db_xref="CDD:32386" /translation="MTPHPAPEETAEDYGQNLAHASVLIIDDEPGMRNFLIKTLGARC RHVEQARTCAEGAMILDQMHFDLVILDNIMPGKTGLDWLEEQRRVGLFADTILITAYA DLDTAIKALRAGVTDFVLKPFRANQILNSVARALDRKYLARENYLLRHELSAGGQAAR GRLLGHSPAIQSVRAMLGKLAPAPTSVLFTGASGTGKEIAARTLHGLSNRAEKPFVAV NCAAISADRIAEELFGVVEDGRARKDGLLLHADGGTLLLDEVAQLPEHVQAALLRVLE DKRIRPIGSEREIPLNLRFLFATNADLKAAVNAGRFRADLFHRINIVNVEMPSLKERQ EDIVELAALFMSEFSGALGMPALDLDADVLLKLSRYDWPGNVRELRNLIERSVILGAF PEEFAGSGRGGGEQALETLEYVEQRHIMAVLDACGGNRAEAARRLGVARKTIDRKCAA WGV" gene complement(696216..696944) /locus_tag="RTM1035_03410" CDS complement(696216..696944) /locus_tag="RTM1035_03410" /note="COG2186 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="regulatory protein GntR, HTH" /protein_id="jcventer:1101493006647_RTM1035_03410" /db_xref="CDD:32369" /translation="MKIDPDNKADLSAQIAEAIRDAIVSGQLIVDERLPSEAELADHF AVSRPTVREALKRLAAQSLIRTQRGAFGGAFVNRLSYPEAYGQQITTATLLLSMNSIS FDTACEARYALERACTPLAAQRRTPDTLATMRAEIHRQGQPGLTDESFCASDVAFHRA LVDSAGNPVLSYQLAGAVEAMQPLMNMITFTARSREAIVGLHTRIADALACSDAEAAQ TALTELEAYTLTLGRDVMAARAPK" gene 697030..697764 /locus_tag="RTM1035_03415" CDS 697030..697764 /locus_tag="RTM1035_03415" /note="COG5486 Predicted metal-binding integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03415" /db_xref="CDD:35045" /translation="MGGGHWLVLFALILGAWALLYAMALPADLRDGAVIYGADFLQSL CIVTPDAAGFGRIILMWALMSAAMMAPTALPAFATYEELSHTGETQFGTLVMGYLGVW LGFSVIAAGAQMALFQAGLLTAFGDSRSGVLSAVLLAVAGAYQFSPVKEACLSKCRRP LSFFMQHWDEGALRNGVRLGLVCLGCCWALMALAFVGGVMNLAFMGLATVIMVLEKLP QVGRYLTRPLGAVLIAASVWVLFTSI" gene 697780..698409 /locus_tag="RTM1035_03420" CDS 697780..698409 /locus_tag="RTM1035_03420" /note="COG5588 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03420" /db_xref="CDD:46924" /translation="MALDTLGTVPWVIKGELILNCNCTVFCPCVVSLGKHAPTEGYCQ AWSGVRIDEGHYGDEDLSGLNVGLMLEIPGLMARGNWKAAAFIDERASEAAYDALVNI FSGKARGTTGLFGVLVSEFIGAERAPVIFETEGNARRLMVGKMIQGEVVPVPGHKGED IVVTNTEYWMGPDITVATATKGRVRAFGRVWDFDGRSAEICQIDWKGPR" gene 698409..698924 /locus_tag="RTM1035_03425" CDS 698409..698924 /locus_tag="RTM1035_03425" /note="COG2318 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="DinB" /protein_id="jcventer:1101493006647_RTM1035_03425" /db_xref="CDD:32472" /translation="MLLAADHVRLMARYNAWQNAQVMRAIDGVSRKVLTEDHGAFFGS ILGTLNHILWADQMWLSRFDASAAPPETGFEQSTTLTPTGAAWSAERFTTDGRIKAWA GRVHSIDLTGNLTFYSGSVGGEITRPVATCVTHFFNHQTHHRGQVHAMLTRAGLSAPI TDLVFMPEEAQ" gene 698921..700033 /locus_tag="RTM1035_03430" CDS 698921..700033 /locus_tag="RTM1035_03430" /note="COG0404 Glycine cleavage system T protein (aminomethyltransferase)" /codon_start=1 /transl_table=11 /product="glycine cleavage T protein (aminomethyl transferase)" /protein_id="jcventer:1101493006647_RTM1035_03430" /db_xref="CDD:30753" /translation="MNAPLLSPSRRLRRTPFSQGVEAAGVKAYTVYNHMLLPTVFRSI EEDYRHLKEAVQVWDVACERQVELRGPDAGRLMQMLTPRDLRGMTPGQCFYVPIVDET GGMLNDPVAVKLAEDRWWISIADSDLLYWVKGIAQGWRLDVLVDEPEVSPLAIQGPRA DDLMAAVFGDAVRDVRFFRFGHFDFQGRDMVIARSGYSKQGGFEIYVEGGDIGMPLWN ALMEAGKSMDVHAGCPNLIERIEGGLLSYGNDMTDDNTPHECGLGKFCNTHTAIGCIG RDALLRVAKEGPVQQIRAIAIEGTAVPPCREWWPVLSEKGARVGRVSSATWSPDFATN VAIGMMRMTHWEAGTELRVVTPDGERRASVQAGFWA" gene 700143..701135 /locus_tag="RTM1035_03435" CDS 700143..701135 /locus_tag="RTM1035_03435" /note="COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="oxidoreductase, zinc-binding dehydrogenase family protein" /protein_id="jcventer:1101493006647_RTM1035_03435" /db_xref="CDD:30949" /translation="MFKALVVEKDAESGKTSAGVKELTLADLPEAEVTVAVEYSTVNY KDGLCIGPGGGLVRSYPHVPGIDFAGTVEASDDARYKPGDRVVLTGWRVGEAHWGGYA QKARVRADWLVPLPEGLDTRAAMAVGTAGFTAMLAVMALEDHGLKPGHGEVLVTGAAG GVGSVATAILAHLGHEVAAVTGRPEQEGYLRGLGASRIVPREDLAETVKRPLESENWT GCVDAVGGAMLARVLGQMKYGASVAAVGLAGGAGLPATVIPFLLRGVNLLGIDSVMQP YANRVRAWERIARDLPMDKLEAMITPATLEDLPRLGADILKGQVKGRVVVDLNG" gene 701189..701704 /locus_tag="RTM1035_03440" CDS 701189..701704 /locus_tag="RTM1035_03440" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="probable acetyl transferase" /protein_id="jcventer:1101493006647_RTM1035_03440" /db_xref="CDD:40669" /translation="MTDQAGIIIRLAREADFAALWPILRDVIRAGDTYAIEPGLTREA VRSLWMEMPRATYVAERGGEVLGTYYLKTNQAGGGAHVCNAGYMVSEAARGQGIARAM CVHSQDEARELGYLAMQFNFVVETNRGAIALWQSLGFDTVGHLPRAFRHPEAGLVDAR VMYKWLGDAAD" gene complement(701701..702501) /locus_tag="RTM1035_03445" CDS complement(701701..702501) /locus_tag="RTM1035_03445" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="3-oxoadipate enol-lactonase family protein" /protein_id="jcventer:1101493006647_RTM1035_03445" /db_xref="CDD:40647" /translation="MARTPEGTAYDLTGPLDAPHVVLIHGLGLSRNSTWGVIAPLLAR HFRVLCYDLPGHGQSTPHPGPLTLTALSTQLIFLMDRLDIPRAALVGFSLGGMINRRA ALDHPARVTALAILNSPHERAPDLQARVAAQARDAAAGGPAATIDAALDRWFTPEFRA ENPAKVDAIRQTVLATDPASYAAHRLVLAEGVTELIRPQPPLTPPALVMTCENDSGST PAMAEAIASEIAGSQCHIHPALRHLGLIEAPQAFAGRLTQFLSRHACA" gene complement(702502..703227) /locus_tag="RTM1035_03450" CDS complement(702502..703227) /locus_tag="RTM1035_03450" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03450" /db_xref="CDD:46571" /translation="MGARSQFEFPAYLQQNNSFSRMLLLCEFPPTRRLGTPEHAGQTM TLELRRSLTLVQRTHREGGKDVADPTLLVAALAIIRNPWFGRGHVEDLGPEIRDQGPV LGRLLTDMILDVTGDRLEGYGKASVVGMGGELEHAMALTHTLWFGNQFRDAVKAKTYL AFTNTRGAAGAALMIPLMDKDDAGRRSHYQTIHTVVPDAPAEDEIILALGASVGGHPH HRIGNRYEDLREMGHDVDNPAGV" gene 703226..704113 /locus_tag="RTM1035_03455" CDS 703226..704113 /locus_tag="RTM1035_03455" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="Transcriptional regulator" /protein_id="jcventer:1101493006647_RTM1035_03455" /db_xref="CDD:30928" /translation="MNITALQTFLAIVETGNLVRASQKLNVTQSTVTARLKSLEEELG QQLLNRQKSGTTLTPAGTKLLRYARIMTGLWRQARYETGLPAGLSSVCTFGCDRELWH GPGRAFFDGVVQGHPDMAVSVQQGGGRELEDWLAAGLVDVILTYGASARGNQTAHALP PEELVLYSDREVTSIRADPKYIFVDHGEEYRRAHGETYHDAGIARVSFDSSFWALQFL LERGGSAYLPRALAAPLVSEGRLFELREAPIYSRKKMLVVNDSAAANWDWFAPLVGAL RARSADWLEHPDRRFVIPG" gene complement(704137..704871) /locus_tag="RTM1035_03460" CDS complement(704137..704871) /locus_tag="RTM1035_03460" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03460" /translation="MQMDDDRLMALADGEITGSEAEALHDRIAADPDLAERYALFVET AELARQAMQDLPEAQVSDALVARIRAMGAASAPPEASNVVPLRTAPAPVAPTRWQPMA LAASLALAVGLGAGLMLSNGAETPVGAPFSTALTEHLDSLPSGNAAQLPDGTALTVVA SFTDAAGQFCREYEAATPGRGGFVAVACREDAGWQLQFAMAQAGNAGAEAGYAPASAL ETLDAYFTATGAGQPMTPDQERGFLR" gene complement(704899..705405) /locus_tag="RTM1035_03465" CDS complement(704899..705405) /locus_tag="RTM1035_03465" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="putative RpoE6 RNA polymerase sigma factor" /protein_id="jcventer:1101493006647_RTM1035_03465" /db_xref="CDD:31783" /translation="MPDKFTEDVVALLPALKRFALSLCRRGDLADDLVQITAERAFRA RDRFDPATQLQPWLFRILRNAWIDTLRRDATRGEVVDIHESPQPDPVDSAAQTDDRLT LNAVRRAMEDLPNDQRQVLHLVCIEGLSYAETAATLDIPQGTVMSRLSRARLALAKSV GIDRDPSR" gene 705595..706983 /locus_tag="RTM1035_03470" CDS 705595..706983 /locus_tag="RTM1035_03470" /note="COG1404 Subtilisin-like serine proteases" /codon_start=1 /transl_table=11 /product="possible protease" /protein_id="jcventer:1101493006647_RTM1035_03470" /db_xref="CDD:40183" /translation="MAWADDGDGGDGDGDGDDGDDGSSSSSGSRSGGKSGGIGTGETT LRDYRRNLRALFRGALPEPARQAARAQAPRAAPRPTEAPNEIIARGLNDVDAAALVAQ GYGIIDRIDLVSLGVNIQRLSVPEGTTLDEARAAVQALPTGETADFNHYYRVEAEESR APDEETSDPLPCEGLHCPARALIDWPNPLGPQGCGAPVTIGMIDTGINTDHSALAGAQ VALTRVAPEDYNASSAIHGTAVAALLVGDPASRAPGLLPGVPLVAVDAFHKESGDERA DAFTLVRGLDQLVGAGATVINLSLAGPPNSVLQETLAALEAAQTVVVVAAAGNGGPNA PPAYPAAYDSVIAVTAVDKAGGIYRRAGRGPHVDLAAPGVEVWTAASVQGARWKTGTS FAVPYVTAAVALWQQGNPGMTPAELRAALSQSAADLGAPGVDDIFGHGLLDLGGRCPV LGDAAILPVLAD" gene complement(706993..708315) /locus_tag="RTM1035_03475" CDS complement(706993..708315) /locus_tag="RTM1035_03475" /note="COG0661 Predicted unusual protein kinase" /codon_start=1 /transl_table=11 /product="putative ubiquinol-cytochrome-c reductase assembly protein" /protein_id="jcventer:1101493006647_RTM1035_03475" /db_xref="CDD:31005" /translation="MTEQNNQTRTAPVPGHRIGRMLRLGGMTTGIMGDMLAGGLRQMA QGQRPHLPGLLLSPATARRVTRDLGQMRGAAMKLGQMLSMDTGLVLPPEMTAIMAALR AEAPHMPPKQLQSVLNTAWGTGWYGRFKRFDLRPFAAASIGQVHRAQTPDGRDLAIKV QYPGVRASIDSDIDNLATLLRVPGLIPREMDLAPMLHEAKAQLHQEADYIAEARHLTA FQTLLSGSDAFRLPELHPDLSTPEVLAMTYIDSQPIDALTDAPQDLRDHVAQQLIDLT LRELFEFGLMQTDPNLANYRFDPATGRIVLLDFGAVMAIDPALTEEFRTLLNAALDED AARTRAAMLRIGYFSAATAPRHQALILEMFNTAMAPLRQSTAFDFGASDLVRTLRDMG MAMGSERELTHVPPPATMFLHRKIGGIYLLASKLRARVALRPLLERHR" gene complement(708380..709405) /locus_tag="RTM1035_03480" CDS complement(708380..709405) /locus_tag="RTM1035_03480" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator, LacI family protein" /protein_id="jcventer:1101493006647_RTM1035_03480" /db_xref="CDD:31797" /translation="MDPNAPEPPVRRPTLSQVAKAAGVSEITASRALRGGSAVAKSTR QKVERAAQALNYMPNRLAGTLAGGASRQIAVVLPSLSNIVFADVLKGLERRLEDDGYH PILGISHYDASREEHLLRDLLSWRPAGLVLAPTSGNAATRALLRAAELPVVEVMDTDP DPADLAVGFSHRAAGRTMAHYLIGRGYRRMAYIGHDIATDFRALARLDGFKDALSDAG LTLSDTLILDGPSSVPLGREGLARLFSQSKAAPDAVFFSNDDMAVGGVFHCQTAGLAL PHDIALAGFNGLSIGQALPTPLTTIASNREHIGYVAADHILRRLKGEAPPRITQIDFR LVPGATA" gene 709877..710860 /locus_tag="RTM1035_03485" CDS 709877..710860 /locus_tag="RTM1035_03485" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03485" /db_xref="CDD:30800" /translation="MRILITGAAGFIGQRVVRALSERDSLIVDGQDRRIAAILATDIA EAPLADLAQSCRRVHAVPGPLDSADVLARIVEDAPELVIHLAGVVSGQAEEDYALGMA VNLQSTIALIDACRSLRKPPVFVFSSSVAVFSCADNDTISEETLPAPLSSYGTQKLMG ELLVRDASRKGFIKGRALRYPTIAVRAGKPNRAASGFASGIIREPLAGVAAELPVGRG LRMHLASPAKALDYTLTAIGLAQADLGLETTVTLPGISVTVGAMLETLEAVAGAEVAA RVTEQPDAAIERIVTTWPGQIITPRAEALGFAPNRDFAEIVREYMDSLTTG" gene 710917..711885 /locus_tag="RTM1035_03490" CDS 710917..711885 /locus_tag="RTM1035_03490" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctP subunit" /protein_id="jcventer:1101493006647_RTM1035_03490" /db_xref="CDD:31825" /translation="MKHFALGAFAALGLATAAEAQQNIVVGHALSPTSHYGVGAQAFI DTLTELSGGAFTGEQAPAGQLGGERDMIEGLQIGSLDVVITSTGPLGNFVPQVYALDL PFLFRDYDHARTVLDGEIGQELLDEISKNNLVALAWSENGFRHVTNSQRAVRTPEDLA GLKLRTMENKVHMAAFEGMGAAPTPMAFPELFSALQQGVVDGQENPVTVITASKFWEV QKYVSLTGHVYSPAAVLASPVLLDGLTEEQRGWFDEAAKASAAATRAEVNRLEEAGVA LLRENGMEVITDIDKAPFAALAEQASYSVYTDQYGGEMIERIKAVE" gene 711946..712446 /locus_tag="RTM1035_03495" CDS 711946..712446 /locus_tag="RTM1035_03495" /note="COG3090 TRAP-type C4-dicarboxylate transport system, small permease component" /codon_start=1 /transl_table=11 /product="Tripartite ATP-independent periplasmic transporter, DctQ component" /protein_id="jcventer:1101493006647_RTM1035_03495" /db_xref="CDD:32904" /translation="MTLFLRFEAITTQLALRLAIVFLLIAVGLALYQVTTRFVFGHPS TWSEVITRSAMIWCVFLAVAPAFREGAMIAVEIVQKILPPRLGFALYLVSMSLSVVFF CILFWQGWAMTERVMSQKLAALEISIAWVYAALPVGSVFILLAILGCMLRAVQKGAVA FSADLQ" gene 712443..713729 /locus_tag="RTM1035_03500" CDS 712443..713729 /locus_tag="RTM1035_03500" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter- DctM subunit" /protein_id="jcventer:1101493006647_RTM1035_03500" /db_xref="CDD:31781" /translation="MNAALALSLAIFFLAGVPIAVAIGLASVIGIEANGRLPLLLVAQ RMFTGIDSFPLMAIPLFILAGNLMSAGGISHRLVELAKSIVGGIQGGLAASCVLTCMM FASVSGSSVATTFAIGAILIPAMVKHGYPAPMAASVQASSAELGVLIPPSIPLILYGV STDTSIGQLFLAGIGPGFLVAGSLMALVLILCRVRGIGLEDGRDRPRVGPALWSALPA LIVPVVILGGIYSGVFTPTEASAAAVAAAVIVGMVFYRELRFADLPEILKKTVLATAA IMLIISAAALFSFLITRSGLPNEIAAWFKDIFESRFAFLLVVNLMLLVVGMFIETSAA ILVLAPILAPIAVSYGVDPVHFGLILVVNLALGMITPPLGVNLFAACAVANLSIEKVI PHLFWFVLTVFGALMLITYIPAITLWPMQTILSVGQ" gene 713726..714616 /locus_tag="RTM1035_03505" CDS 713726..714616 /locus_tag="RTM1035_03505" /note="COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases" /codon_start=1 /transl_table=11 /product="2-hydroxy-3-oxopropionate reductase" /protein_id="jcventer:1101493006647_RTM1035_03505" /db_xref="CDD:32267" /translation="MTEIVHFVGLGSMGLGMAQSALRAGFEVYGHDPDAGRRDLLVAA GARALNRGAPKAAVLVCVVLNAAQTRDALFGAQGWAEGVQAGGVILGCATVAPEFARE MEEEASRRGLLYLDAPISGGAVKAAEGRLSIMASGRAEAFDRADAVLAALAETVHRLG DCAGPGSAMKAVNQLLAGVHIAAMGEALSLATSQGLDLARVLEVIKVSAGNSWMFENR APHVIEADYAPRSAIDIWPKDLGIVAEMAARVALPLPLVAAALAEYRAASGAGLGRED DAAITKHIAARAGLRLPGDV" gene 714616..715857 /locus_tag="RTM1035_03510" CDS 714616..715857 /locus_tag="RTM1035_03510" /note="COG3395 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="ygbK domain protein" /protein_id="jcventer:1101493006647_RTM1035_03510" /db_xref="CDD:33202" /translation="MLLGCIGDDFTGSSDLANTLTKAGMRTVQYVGVPDAPADTGVEA GVVALKSRSIPVAEAVAHALAALEWLRAQGCQQILFKYCSTFDSTPEGNIGPVAEALA DALGAQQVIFCPAFPGAGRTVYQGHLFVKDRLLSESGMQHHPLTPMTDPDIRRWLGAQ VRGTVGHLDAQIVRQGPEAIKAALAAQEHRLIVADAVSDADLVALGHAAAELPLITGG SGIAMGLPDNFWARGQLAGKGGAWHGQSGPVVVLSGSCSEATRGQVARHATAHPAREI SAADVMAGRVAAEDLADWAAAQKGIAMIYSSADPARVAQDQAQFGAVAVAGAIEALFA ALARALVAGGVTRLVTAGGETSGAVVEALGLKELEIGPEIAPGVPVMRAGHDLVLALK SGNFGGPDFFIEAAQRMETST" gene 715854..716498 /locus_tag="RTM1035_03515" CDS 715854..716498 /locus_tag="RTM1035_03515" /note="COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03515" /db_xref="CDD:30584" /translation="MSENRLREDLCFWAKSLFDRGLTGGASGNISVRTEDGGLLVTPT GVSMGRLDPARLSRFDAGGRLISGDPPTKEMPLHAAFYETRQSAGAVVHLHSTHSVAL SILPDTDPDNAIPPLTAYAVMRVGKVALLPFYVPGDAAMAEAIRGLAGRRASVLLANH GPVVAGKDLEAAVFAMEELEETAKLALILRGTGARPLDAGQIAQVVRKFEVDWD" gene 716498..717265 /locus_tag="RTM1035_03520" CDS 716498..717265 /locus_tag="RTM1035_03520" /note="COG3622 Hydroxypyruvate isomerase" /codon_start=1 /transl_table=11 /product="hydroxypyruvate isomerase, putative" /protein_id="jcventer:1101493006647_RTM1035_03520" /db_xref="CDD:33421" /translation="MRFSANLGFLFTDRPLPEAIHAAARAGFAAVECHFPYDFAADEV RAALEETGLPMLGLNTWPGDRAAGDFGLAAVAGREDEARAAIRQAVDYAQAIGAGAVH VMAGCTDSGAEAEAVFRSNLAYACDLAAPHGLTILIEPINQRDVPGYHLSSTAHAASV IAALRRDNLRMMFDCYHLQIMGGDLLRRFARYQPIIGHVQFAGVPDRGAPDQGEVDYG WLLPQIAALGWPGPFGAEYRPGEAGTEASLGWLTRFA" gene complement(717287..718330) /locus_tag="RTM1035_03525" CDS complement(717287..718330) /locus_tag="RTM1035_03525" /note="COG1752 Predicted esterase of the alpha-beta hydrolase superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03525" /db_xref="CDD:31938" /translation="MSKTGKPINLALQGGGAHGAFSWGVLDYLLEDGRLHIAGVSGTS AGAMNAVALADGFTRAGPDGARAALDHFWRSMSGSVKHSPMQRTPLDRLTGNWGLENN PFYHFMNALTGVASPYQLNPMNINPLRDLVEESIDFEMVRKCTAFELFVSATNVETGR VKVFAREELTADMVMASACLPQMYQAVEIDGVPYWDGGYMGNPSLFPLYGKTGTDDIV VIQINPIERKGAPRSAQEIQNRLNEISFNASLLKELRAIDFVDRLIAQDKLSTDHYRP VKVHLIENEAALKPMGASSKMNVEWAFLTRLRDIGRETAAAWLDANYDHVGVKSTVDL RAMFQGIGAEHQG" gene complement(718435..719448) /locus_tag="RTM1035_03530" CDS complement(718435..719448) /locus_tag="RTM1035_03530" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="NAD-dependent epimerase/dehydratase" /protein_id="jcventer:1101493006647_RTM1035_03530" /db_xref="CDD:41421" /translation="MTRVFITGTAGFIGYHLANLLLDEGIVVHGLDGMTDYYDVSLKQ RRHQMLMQKPGFVATEAMLEDQTAVDAAIDACAPDIIVHLAAQAGVRYSLENPRAYID ANIVGTFNIMEAAKRHAVRHLLMASTSSVYGANTDMPYAETMKADSPMTIYAATKKAT EAMGHAHAHLWNLPTTMFRFFTVYGPWGRPDMAYFKFVEAILAGRPIDIYNHGEMYRD FTYVGDLVRGIRLLMDAAPVRPLTPEDIAPGDSLSPVAPYRIVNIGNSEKVRLLDFVA AIEDALERPAIRNMMEMQKGDVPATWADARLLETLTGYRPQTSVRDGIAQFVRWYRSY YQV" gene complement(719468..720637) /locus_tag="RTM1035_03535" CDS complement(719468..720637) /locus_tag="RTM1035_03535" /note="COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities" /codon_start=1 /transl_table=11 /product="aminotransferase, class I and II" /protein_id="jcventer:1101493006647_RTM1035_03535" /db_xref="CDD:31362" /translation="MNFDEIIDRRGTHSDKWDMMQAKYGVSPEDGIPMWVADMDFRPP ACVTEALIGMTQHGVYGYYGDDAAYRAAIQWWMQTRHGWTVEADAIFTTHGLVNGTSM CIDTWTAPGDAVVVFTPVYHAFARVIRAAGREVRECPLLNTTGHYEMDFDAYDALMTG NEKMLILCSPHNPGGRVWTKAELEGVADFARRHDLILVSDEIHHDLVMPGQRHTALPH IEGIADRLVMMTATTKTFNIAGAHLGNVIVPDAKLRAQFAARMGAMGISPNSFGLFMA EAAYSPEGAEWVDALCLYLDGNRQLFEAGMQAIPGVRAMPLEATYLTWIDFSGTGMTA AEYTGRVERDARVVANHGPTFGTGGESFLRFNIATPRARVAEAVARIQTAFADLQ" gene 720736..721254 /locus_tag="RTM1035_03540" CDS 720736..721254 /locus_tag="RTM1035_03540" /note="COG0242 N-formylmethionyl-tRNA deformylase" /codon_start=1 /transl_table=11 /product="peptide deformylase" /protein_id="jcventer:1101493006647_RTM1035_03540" /db_xref="CDD:29602" /translation="MKRSILIHPDPRLRKVCTPVKDVTDALRKLSQDMLETMYDAPGI GLAAPQVGVMDRLIVLDCVKDEGATPRPIVMLNPEITAFSEEKSVYEEGCLSIPDQFA DVTRPAEVEMRWMDLDGVEHQEGFGGLWATCVQHEIDHLDGKLFIDYLSAMKRQLITR RMQKLKRELARG" gene 721303..721752 /locus_tag="RTM1035_03545" CDS 721303..721752 /locus_tag="RTM1035_03545" /note="COG0242 N-formylmethionyl-tRNA deformylase" /codon_start=1 /transl_table=11 /product="peptide deformylase" /protein_id="jcventer:1101493006647_RTM1035_03545" /db_xref="CDD:29602" /translation="MPAAPLPEITDQTRALWNEMIAVMEAMPGVGLAATQLGEMQALA VVDASTARGQAVRMANPEILHASVQLRPHEEASPCLPGVSAMIERPRAVTVRFLNADA EVEERDFVGLWATSVQHQIDHLQGRMYFDRLGRVKRDMLLRRARKIG" gene 721811..722719 /locus_tag="RTM1035_03550" CDS 721811..722719 /locus_tag="RTM1035_03550" /note="COG0223 Methionyl-tRNA formyltransferase" /codon_start=1 /transl_table=11 /product="methionyl-tRNA formyltransferase" /protein_id="jcventer:1101493006647_RTM1035_03550" /db_xref="CDD:30572" /translation="MRVIFMGTPDFSVPVLEALVAAGHEVAAVYCQPPRPAGRGKKDR PSPVQARAEALGLPVHHPVSLKEATAQAEFAALKAEVAVVVAYGLILPQAVLDAPTRG CLNIHASLLPRWRGAAPIHRAIMAGDTETGVCIMQMEAGLDTGPVLLREPVAIGPQET TGELHDRLSALGARLIVAALERLDALTPEPQPEAGVTYAAKIDKSEARVDWTRPATEV DRLIRGLSPFPGAWCEVGGERIKLLCSAMAEAHGAPGVVLADGLTVACGTGSVRLLRL QRAGRAAQDADEFLRGMPLPRGTQLG" gene 722724..722966 /locus_tag="RTM1035_03555" CDS 722724..722966 /locus_tag="RTM1035_03555" /note="COG3493 Na+/citrate symporter" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03555" /translation="MFMQLFGTVVIAGIVGYASEKSGFTRNGYLPSIIICIGGAFLFY FVRIMFGIRFGAPGIDAILSSIGALIIVPTHWRNRR" gene 722970..723209 /locus_tag="RTM1035_03560" CDS 722970..723209 /locus_tag="RTM1035_03560" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03560" /translation="MGIIGLLIVGIAAGFLATRLMRVEVGVVPTILIGIAGTLIGAVV IRMVLMITGFLGGLIGAVLGAMLLVWLWKMIGQRR" gene complement(723213..723836) /locus_tag="RTM1035_03565" CDS complement(723213..723836) /locus_tag="RTM1035_03565" /note="COG2860 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03565" /db_xref="CDD:32687" /translation="MSALILLDYASVLIFALTGALVASRQQLDIVGFAFIACLTAVGG GTLRDVLLDRNPVFWLGNPNYILIACVAALFVFFTAHLVESRYRLLLWLDSFALAVAV PAGVSAAMVMGQSPVIVVLMGMVTGCMGGLMRDVVCNEVPLVLKQGELYVTAAFAGAL GAVIAATLTNDPLVILGTCAALTWALRVGSLTLGWRLPVYRARPPRQ" gene complement(723833..724300) /locus_tag="RTM1035_03570" CDS complement(723833..724300) /locus_tag="RTM1035_03570" /note="COG0328 Ribonuclease HI" /codon_start=1 /transl_table=11 /product="ribonuclease H" /protein_id="jcventer:1101493006647_RTM1035_03570" /db_xref="CDD:30676" /translation="MPALFAYTDGACSGNPGPGGWGVLMRAMDGDAILKERELSGGEA DTTNNRMELWAAIAALEALSRPSTITIVTDSAYVKNGVTGWMHGWKRNGWRTADKKPV KNVELWQRLDEAQKRHTVTWEWVKGHAGHPENERADELARAGMAPYKPSKAKG" gene complement(724300..724752) /locus_tag="RTM1035_03575" CDS complement(724300..724752) /locus_tag="RTM1035_03575" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03575" /translation="MQMIPRAPLFLGLAGLLPFLWGALTVVLPDLGLWTAQTIGPRFA GPYVMLFYGAVILSFMSGVLWGFATRATGTMAGICYGLSVIPALWAFFMTGGGPTSAG TSLIFGFAGLLALDWQFWRWGLTPPWWMALRMLLTAVVIGCLAVGVLL" gene 724880..726304 /locus_tag="RTM1035_03580" CDS 724880..726304 /locus_tag="RTM1035_03580" /note="COG0277 FAD/FMN-containing dehydrogenases" /codon_start=1 /transl_table=11 /product="oxidoreductase, FAD-binding protein" /protein_id="jcventer:1101493006647_RTM1035_03580" /db_xref="CDD:30625" /translation="MTQTPTLAPATPAFIDALRARLPAPVFREATPGYFEEPRGRWQG QGVVLAPGNTEDVAEIVRACAAARVPVVPYGGGTGLVGGQIAPGGPTPVILSLERMRA VRGIYPAENVIVVEAGAILQDIHTAAAEVDRLFPLSIAAKGSARIGGNLATNAGGVNV LRYGNARDLCLGLEAVMPDGRIWHGLKRLRKDNTGYDLRNLLIGSEGTLGVITAAALK LSPRPMGEGTALMVVEGPRAALDLLALARARIGEGVSAFEIMHRAGLEFLAETLPDIR HPFAKMPEWFVLIDVGLASGLDPAAMLEGLFAEAFEAGLVSDGMIAQSETQRHQFWEV REQIPEANRRIGSISSHDISLPMSLIPDFIVQANVVIAGIGAFRINCFGHLGDGNLHY NVFPMPGRGRADHVAERDEIKRAVHDLVHEMGGSVSAEHGIGRLKVEDLERYGDPVKL DAMRAIKTALDPLGIMNPGAVLRG" gene complement(726318..727283) /locus_tag="RTM1035_03585" CDS complement(726318..727283) /locus_tag="RTM1035_03585" /note="COG3239 Fatty acid desaturase" /codon_start=1 /transl_table=11 /product="fatty acid desaturase family protein" /protein_id="jcventer:1101493006647_RTM1035_03585" /db_xref="CDD:33051" /translation="MHAPSQLNARPEAGRQPPKTRQAARVEWPTLGLLALCYAMWVFG TTAASALALPLGIVVTGLAIALHSSLCHEALHGHPFRSQRLNETLVFPALCLAIPYAR FRDTHLAHHRDEFLTDPYDDPEANYLDPIVWARLPGWVRAVLRFNNTLAGRMLIGPMV AQISFLRSDWRAIKTGDRAVRDAWLWHIPAVALVLAWLWFVPMPVWAYLLAVWLGLAI LKIRTFLEHRAHLRASGRTVLIEDRGPLAWIFLNNNLHVVHHMHPEVAWYRLPALYAA RRDHYLRRNDGYVYRSYAQIFAAYFWQAKDPVAHPLWPGRSDGDT" gene 727392..728255 /locus_tag="RTM1035_03590" CDS 727392..728255 /locus_tag="RTM1035_03590" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family protein" /protein_id="jcventer:1101493006647_RTM1035_03590" /db_xref="CDD:28977" /translation="MSKKIDKRLRATLFRNRLTEAMRRRGSNQSILARAIEVDRSTVS QLLKGDAARLPNAQVVGECASALGVSADWLLGLTDRPETAADMLANTLSLTEAPRALV DEQIFAWHKEAAGYKIRHVPAALPDMLKTRAMLEWEYAPHLGRSTDQAIGASEDRMAW MRAARSDYEIALPLYEIESFARGEGYYRGLPADLRRAQLDHLIATTTQLYPRLRLYLF DARRVYSAPITLFGPLLAVLYLGRNYMVFRDTERIEAITLHFDGLVREAGVTAREIPA HLRALRDGLVR" gene complement(728269..728685) /locus_tag="RTM1035_03595" CDS complement(728269..728685) /locus_tag="RTM1035_03595" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03595" /translation="MSARQHRILTLMARQENRELGHLSMQLGHLRRQEMQQFDMADRL GQMLDQSAQAPAEPMTPGQLSTAHFMGRTLVQQLEATRSQMARTRQERAAVEHDLSQH QRRQQILQERADLSRRALHAARAEAEDNATLPRRTR" gene complement(728682..730016) /locus_tag="RTM1035_03600" CDS complement(728682..730016) /locus_tag="RTM1035_03600" /note="COG1157 Flagellar biosynthesis/type III secretory pathway ATPase" /codon_start=1 /transl_table=11 /product="FliI, Flagellum-specific ATPase" /protein_id="jcventer:1101493006647_RTM1035_03600" /db_xref="CDD:31351" /translation="MTDLLARLAQATEAMTEVPPPGYSGQVLRYDGLILECAGFPASP GTRCRIDTEDGKGATGEIVGFANGRNLLFLDQPGARITHGCQVHKMRGGHNAAMGDAL LGRVLDAEGAPLDGYGPPDCPETRPLSGREQNPLARQPVDAPLDVGVRVINAALTVGR GQRVGIIAGSGVGKSVLIEMMTRYTSADVIVVGLIGERAREVGDFVSKVMTGENRAKT CVVAVPADRSPLLRLRAAHRATAIAEYFRDQGKQVMLIMDSLTRVAHARREIGLALGE QPTAKGYTPSVISMIPGLIERAGPGLPGQGSITAFYTILADGDDTTNDPVVDTARAIL DGHFVLSRNQAQMGIYPAIDLTQSVSRVMKDIAEKPHHAAAMRLRRLIALYMENRDMM LMGAYSPGQDATLDEAVTLWPRIEAFIRQDIHEPASLEDSISALCALTGGAA" gene complement(730013..730804) /locus_tag="RTM1035_03605" CDS complement(730013..730804) /locus_tag="RTM1035_03605" /codon_start=1 /transl_table=11 /product="flagellar protein FliH" /protein_id="jcventer:1101493006647_RTM1035_03605" /translation="MTAMPAPDLPPAPGALTPEDLLALVRRSSQQFQRRDPAIPETQA ESSFAPQTVVRPLRAPAPEAEPAPVTATPEEKPTASFTPAPPPATFDIEAERRVAWAE GHAAALQDIEAARAAARAEALEEARATAAQDIAETRDAFTAAITRLTSAENERLADLS TKLELAVRQLATQRAGQKIDEAPRPFLRRIEKITHQIAAGAENTVVLMNPADLMAIKP HIKDFSPLAKGRLSPDTTLGRGDLRIRMEDITFSDVIAERDGGLA" gene complement(730809..731846) /locus_tag="RTM1035_03610" CDS complement(730809..731846) /locus_tag="RTM1035_03610" /note="COG1536 Flagellar motor switch protein" /codon_start=1 /transl_table=11 /product="Probable flagellar motor switch protein FliG" /protein_id="jcventer:1101493006647_RTM1035_03610" /db_xref="CDD:31725" /translation="MTLALPAPSGTRPGADLTPVQKAAILMMIFGEETAAQILRALSP SEVQVLGEAMFTVQGVDHDTVDAVLNEFLGLVSNQTGIGIGAGNYVRQVLDQALGAHK AQSVLSRIVPSNSERPIEILDWMDPSAVAELIQDEHPQIMALVIASLDYAQGAEVLKL LPPEAQPEIIRRIATLNTVQPEALRDLEEVMRAKFKANTTLRASQIGGVKAAARIMNF TRQDMEERIMKDIRKDDKTLSEDIQDNLFVFDYLIKSDERALQTVLREIDSEILILAL KGSNPTLRDKLLGCVSARAAANIMDEMEAMGPVRLSQVQEAQKQVITVARRLSDEGKI TLAGRGGEKMV" gene complement(731843..733537) /locus_tag="RTM1035_03615" CDS complement(731843..733537) /locus_tag="RTM1035_03615" /note="COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein" /codon_start=1 /transl_table=11 /product="Flagellar FliF M-ring protein" /protein_id="jcventer:1101493006647_RTM1035_03615" /db_xref="CDD:31952" /translation="MDGQQTTLPAQAGATSLVQRARLALSGMDGFIAQPALRRALPAI GVLLVVTLGLAAWLLLAPANRVTLHAGLPEAEKSLALDALTAAGMDARLDPSSGALTV AADQFHSARMLLATQGLPEGATDGMSAIDEMPMGTSRQIESARLRRMQELDLARSIQE LRPVRAARVHLALPERSAFVRDSQPPRASVFLELAPGMALDQAQVRAIVSLVAAAVPD MPRGNVSVVDQTGTLLTSPEEDPVQSEADRQMQHQRRLETLYRDRVLSLLTPIVGAGN AAVEVTLDMDFTRSEITSEEYLPDTALRSEQSSSQQTSGAQAGGIPGAVANTPPNEAQ MAEAATQGAKSGTTNSATSSTRNYEVSRRVETRQPQTAQINRVHAAVLLHRLPTPAAP AEGEATSAAPEAVPLAEIEALTRSAIGYNAERGDIVTVASAPFVVAPSVISAERWYDA AWLPTLGRTLAQLALFGIIVLGVVRPILNRLLPPVGATATTGMTYGDAIEVPRGESLS ALRQRLETAAPNAEDLNGAITYEEKIDLLRQMAGSETNRIAGVFKSMITPTGEDRP" gene complement(733569..733895) /locus_tag="RTM1035_03620" CDS complement(733569..733895) /locus_tag="RTM1035_03620" /note="COG1677 Flagellar hook-basal body protein" /codon_start=1 /transl_table=11 /product="flagellar protein FliE" /protein_id="jcventer:1101493006647_RTM1035_03620" /db_xref="CDD:42054" /translation="MSLTGISSSVSMMHASQAAARPDPIQRPTAMADAQGPGFAERLG KAVESVNTQQSKASQAARDFETGRTENLAAVMVEQQVASLGFQMTMQVRNKALTAYRD IMNMPV" gene complement(733908..735044) /locus_tag="RTM1035_03625" CDS complement(733908..735044) /locus_tag="RTM1035_03625" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="Torf protein" /protein_id="jcventer:1101493006647_RTM1035_03625" /db_xref="CDD:33622" /translation="MADICITAANFPQAQALKALLDGRRLNVRIGYQPTCHTLVQGAP VTDQRALVELARKLGAKRIVVIEGQAAEFALREDLGGRMLTVSLPDSGLPALRDAALM AVADLLAAPFGTMVAADPNSGALIDMARRVARFDVSVFINGPTGSGKEVLSRLIHQAS PRADKPFVAINCAAIPENMLEALLFGHEKGAFTGANTANKGYLRAADGGTLLLDEISE MPMALQAKLLRVIQEKVVTPLGSQTEAQVDVRILATSNRDMEAEIARGAFREDLYYRL NVFPLETLALCARPQDVPVLAQAMLRRHTPEGLPTPLLSPEACDILAGHAWPGNVREL ENVMQRALVLADGMVIAPEHIMLVARPTSLTRSRPAALPTSLAA" gene 735409..735717 /locus_tag="RTM1035_03630" CDS 735409..735717 /locus_tag="RTM1035_03630" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03630" /translation="MLSKTYHLKFPSLDAAQIAAPFITEILGNAIPECRISGLTVMIG KEGDISVNLFFPSIADLKNFEKKHGGFIQTMKKTFLFRSTGFEGVCIFNFDGNAEDAA " gene 735857..737068 /locus_tag="RTM1035_03635" CDS 735857..737068 /locus_tag="RTM1035_03635" /note="COG0643 Chemotaxis protein histidine kinase and related kinases" /codon_start=1 /transl_table=11 /product="Chemotaxis histidine protein kinase, CheA4" /protein_id="jcventer:1101493006647_RTM1035_03635" /db_xref="CDD:30988" /translation="MTARAEQVPEQASGGALLRVSSDKIGRLMDLVGELSLSVSETIN APELANLDLVGFEAAAHRLSMIVGEVQDAASELRLVPVDEVFRRLKRMVRELQRETGK QIDLEMRGEDTSIDKLVADRLYDPLLHVVRNSADHGLEPPAEREAAGKSPAGRIILSA AQVGSEVRIQVIDDGRGLNRGKILAKARERGLFGPTEEPEDAAVWKVIFEPGFSTAEA VTTLSGRGVGMDVLNTTMKDLRGRIGVQSEEGKGTTVSLHIPVSLAFLDSVILRLGTQ LYCVPIDDIAEIVKPGLGDHLALSAEGGCEMLRQRDRFIPVCRLEKFFDGMRSELPPL SEMVFIVFESTSGPIAVPVDEILDRQQVVMKPLEGTLTRVRASWGFALLSSGEVAMVL DCERLANGGGR" gene 737068..737877 /locus_tag="RTM1035_03640" CDS 737068..737877 /locus_tag="RTM1035_03640" /note="COG1352 Methylase of chemotaxis methyl-accepting proteins" /codon_start=1 /transl_table=11 /product="MCP methyltransferase, CheR3" /protein_id="jcventer:1101493006647_RTM1035_03640" /db_xref="CDD:31543" /translation="MQVYADQAGFEQLRDWLSRRCGITFGPSKADLLRQRMERVLRRF DLPDLNHLARELDRVGAQDLQLAVLHAASINHTYFFREIEVLDQFMNLALPELKERPE FRFWSAACSSGEEAYTVGMMLADRLGPAALNRTHILGTDISDPMVERAELGIYSHRQF SQTDPMVLKRWFEPAGLDQYRVAPELRRACTFRRMNLKATPYPFNLPFQAVFCRNVLY YFDRADQVATVNALYDVVEPGGWLITSVTESVRQLGTLWEPVATGLYRRRS" gene 737874..739004 /locus_tag="RTM1035_03645" CDS 737874..739004 /locus_tag="RTM1035_03645" /note="COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain" /codon_start=1 /transl_table=11 /product="chemotaxis methylesterase, CheB2" /protein_id="jcventer:1101493006647_RTM1035_03645" /db_xref="CDD:32383" /translation="MMTRSAAPVTVLVVDDSSFFRRFLTRTLGADPGIEVIGEAASAE EAHEFVMARRPDVITLDLEMPGLGGMQFLRQTVARLRIPTIVVSSSTQLGARRSIEAL EAGAVDVMPKPQGVAPGMVDNIALATIAARVRAVAQVDMHRMKSPVSDPAPVPSPTLA APVLSRDWVIALGASTGGVQALGSLLQALPANCPPVVIVQHMPAGFTEAFARRLNATC AIEVREAHHGDRLSPGLALIAPGGERHMRLRRAASGTLAVELVTGDPVCFSMPSVDVL LTSAAQVAAPRLSAAVLTGMGSDGANGLLAARLAGAQTYVQDEATSLVFGMPARAWER GAALAQVPLDQMAAQLLASVGTTSATQRAPAAPAPRMTHRGV" gene 739007..739528 /locus_tag="RTM1035_03650" CDS 739007..739528 /locus_tag="RTM1035_03650" /note="COG0835 Chemotaxis signal transduction protein" /codon_start=1 /transl_table=11 /product="Chemotaxis protein, CheW4" /protein_id="jcventer:1101493006647_RTM1035_03650" /db_xref="CDD:31177" /translation="MTKTAFADTQTPQTELQAEPSDSIETMYLTFPVGSELYGVSIGV VTEIVGLQRIMSVPDVPHYIKGVINLRGKVIPLMDVRLRFGMPDKAYDDRTVVIVLQV NDAPVGLIVDGVNEVLDIPANQIDRTHSFSGSEGRSLVLGLGRLEERVAILLNVNLLV EDDVLVPPMMAEA" gene 739532..741481 /locus_tag="RTM1035_03655" CDS 739532..741481 /locus_tag="RTM1035_03655" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="putative cytoplasmic chemoreceptor, TlpT" /protein_id="jcventer:1101493006647_RTM1035_03655" /db_xref="CDD:47612" /translation="MAAPEPNPPETDPDLVFTSRSAATPTTETSSPQPAPDQPAGDTE RKEQMTSQSPRDSKPKANDTMDDMKEMDFSKRVVATTLLASLGNPIMVADEDYNILYC NETGFQMFERIENDIRCDLPNFRARDIIGKNVDVFHKNPHYQRRIMDNMTGPHEGAFT VGGISLEFTATPVPGVERGTQFVLVEWRDVTEIKRVTAENDRTLDQFRLLLSEMEKMA AAHDAGDIDVFIDSNTFDKAEVRKAAEMLNAMVLAHIETKKLAMGVFEEFGEGNFDAP FPQMPRKKVFLNTIIEKVRGNFRGVVAEIRTLSDSIVAGNLDVQADLSKFKGEYRSVI ESFEQAFGSLNSAFAVIAEQVDQVATTVTQVAHSSQTLSTNSQVASASVEEVSASVNQ TDQQVRANAESTQKASKFVGSAVGLADQGAAKIKDMVTAMHGIKTSSQDIAKIIKVID EIAFQTNLLALNAAVEAARAGQHGRGFAVVAQEVRNLAGRSAKAARETSDLIEDASNR VNAGVRIADETSEAFTGISQQITQVKEIVEEIDRSGAEQSRGVAQISMAMTEIAKSAL DSSQQADELAAGAAEMSAATQQMKEEIGRFKLRRTAAAMPMGGFNGLTPEMMAQIQAM MSGKPNGRLNGGGSLDLDARGFHGF" gene 741543..741953 /locus_tag="RTM1035_03660" CDS 741543..741953 /locus_tag="RTM1035_03660" /note="COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain" /codon_start=1 /transl_table=11 /product="chemotaxis response regulator, CheY6" /protein_id="jcventer:1101493006647_RTM1035_03660" /db_xref="CDD:32383" /translation="MTMVYNVMVVDDAAMMRLYISSFLKSRKDFKLVAQAANGQEALD KLPDLPDLDLILLDIEMPVMDGLEFLRHAKLKTRAKICMLSSVTVQGSPLAAKARELG ADGVVSKPSGTVSHDLEEKTGDELTRVMRALVGA" gene 741988..745719 /locus_tag="RTM1035_03665" CDS 741988..745719 /locus_tag="RTM1035_03665" /note="COG0643 Chemotaxis protein histidine kinase and related kinases" /codon_start=1 /transl_table=11 /product="Chemotaxis histidine protein kinase, CheA3" /protein_id="jcventer:1101493006647_RTM1035_03665" /db_xref="CDD:30988" /translation="MMDEMDEIWMLYADDGAQSLDAMEAALDALEGGAGDMGAHIGAL FRAVHTFKGNSRVLGLAQVEGLAHLAEDLIGLVRDEGVPMSGEITDILMRTGDALRGM LEETADTRADVEPEPTAGLKQDLRAMIGRLTGREAEAPAAPSEDKAAEPQNEAAPTPA DVQEEPEAAPPAPAPKPKVPAFDMGLAGLLDQLDGGDGADFDEFEGDDDEPEFDQDLA PEAEAEEEPDVEPELEPELEAEPEPEPAPQVKTVAEVTEGKLLAPDPEHHKIFNDMAV KACDGLDALLADWAEDSSPRAARKQADNLHYAAGQLNLADWLALLGPFLDADAPDLTA TRDLSKAMRRLLGGESAEPEAMDMPAPEAQPMPAPAPVAAPEPEPEPEVAAAPEPEAA PQKKTKARPKPVVEITEGKLRADPTYHQIFADMVAKTLEKLDALCSDWSEATSPATLR KEADGLRYAARQLYLADWVALLDPIADATGMSRPDADGHVAALRARYAKDFTSGHIPT PTPEPVDAISDGRAFFNAVAELYPLISDQGIRMAGQTPCTMDERRDLAERIADLAAPR GYVRLVDSAHRLSQEPAGQAYRAAELALYEELVSVERSLPASVFDAERMAPSKLLSMW CADHIFETLQSLRRGLEARGGEAEANWFPAFDTLMRQVHFACLNYRIDTASQLTMALI DLFARVRVDQKAPDVILLQMGRGFIDTMELVFDALDQGDTPDTSRIEKMFEEATNACF VASGVMTAKSIETRLGLPPEFHRVMSPESVKTAHEAIKEGLHFYVLRADLNDDDALAQ GFLEWITTGVVRMITNVTVFLDKATLFDFLVASTLEEDRMVERLAMLDPTGARLMMAR ALRVSEASESDAVEPDTLDLIPMSDVGDSLALLEAVGAISASHAQLEHELTQLASVDL VQDVLEALRVAGVGELEQRVRSVLRDRLEQHHLRLQEISESGAQLSTELSHLQQESVA QRSRPAEVLLRPLKAYVATRSRKIGVDATVTYVGGDAMLDQMLIEELRGPLKTLVNLR LAGEYPASRFHISVEAESDHVRVELTDNSPEAATAPAYAALADEMARKKGALRRVSLP AGAGVRFHLRVPQHMIVLDGMVVRVGHVRYVLPVDTIHRILQTDRLLPVSASGATRML NIDEGALVPVHPLMPEAPEAARGARLYVILSSNETRIAIPVDELLGQQLVMLRPLQGV LSGMRDMSGIAVLSGGEVGMVVAVSALVSGDTRTASVAA" gene 745816..746214 /locus_tag="RTM1035_03670" CDS 745816..746214 /locus_tag="RTM1035_03670" /note="COG1516 Flagellin-specific chaperone FliS" /codon_start=1 /transl_table=11 /product="putative flagellar protein FliS" /protein_id="jcventer:1101493006647_RTM1035_03670" /db_xref="CDD:31705" /translation="MSFAFARSRYRQAETLVQEAATDPYDIVFVTLRELNRSLGVLAR TQQEARPLPSDHVNRVLTAIYILQSSLDFEAGGDLAGDLFQLYEFARFHVLKGLRGEE GARLTEAAAAMGDILDAWQQIGSQVKAQAV" gene 746211..746540 /locus_tag="RTM1035_03675" CDS 746211..746540 /locus_tag="RTM1035_03675" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03675" /translation="MTRVVQQMTYSLLGDQIRNLTTALVAAAETGDHAAVSRADHALR CAVIALVGGASLAEDGAQDRIAILAEALDAVRRTADVLSAKAARRAGQGRANLVYLNC DRKVGPR" gene 746540..746761 /locus_tag="RTM1035_03680" CDS 746540..746761 /locus_tag="RTM1035_03680" /note="COG0531 Amino acid transporters" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03680" /translation="MAIASETACGTCLRLRMFLTIAGALIAGLYLQPGWATAVAGLMP APLLIGWAICGFGTLGFALRLRHHLRHQR" gene complement(746780..746926) /locus_tag="RTM1035_03685" CDS complement(746780..746926) /locus_tag="RTM1035_03685" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03685" /translation="MIAMRQTFIPAPGTDPHKVGVELVLCDEHGEPRRQHVWGLVRLL RRLC" gene complement(746982..747482) /locus_tag="RTM1035_03690" CDS complement(746982..747482) /locus_tag="RTM1035_03690" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03690" /translation="MTRISPRQPLIVFAVTASLGPIALGLASLWILNQTPAVPQPTAA PAPASEAPTGPEPRRYLPLSLPVTVSLPEGGGTLSIGLGVALREAGSLELMARLADRQ QEAQAELADVMLRAAESLPADTRLAALRDSLPETLQEAMNARLIAMGEEPAILEVLIL DWAHAP" gene 747593..747979 /locus_tag="RTM1035_03695" CDS 747593..747979 /locus_tag="RTM1035_03695" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03695" /translation="MGRVAGALSKFRILRRAAGQATPGQTPDAFPLVRRSTNLHDISL VERHLPEILGRALARSWIDRAFSTALLADPKALLAQHDIHLPEAVSIEVEMTPTQRHR LVVYEQRPDGERRRMMYLQLVMMAGK" gene 747980..748615 /locus_tag="RTM1035_03700" CDS 747980..748615 /locus_tag="RTM1035_03700" /note="COG0790 FOG: TPR repeat, SEL1 subfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03700" /translation="MRRVLLVSALWLCGAAAMAGSTPDFGRAVALAQDGQAGAAVAIF ADLAQAGHRAAQVNLAVMLARGQGVPQDDQAAAYWAWRARLAGEMRAMEVSDLLLGRL TEAARARLADRLIADLSARARDGVPGQFAAIGRVEAQLRTPAKMDEAALWFTLGAAFE EPGAVALREVAMADLEPKARLAVQERAGAEFVKWCADMPAEARPEACRPVP" gene 748743..749531 /locus_tag="RTM1035_03705" CDS 748743..749531 /locus_tag="RTM1035_03705" /note="COG4786 Flagellar basal body rod protein" /codon_start=1 /transl_table=11 /product="Flagellar distal rod protein" /protein_id="jcventer:1101493006647_RTM1035_03705" /db_xref="CDD:34397" /translation="MSSNVMHVAKTGLNAQQARIQVISNNLANVNTTGFKRDRANFET LLYQTLRPAGAQTSEATEQTAPTTLGTGVRLVSTEKMYTQGSLTTTDNALDLAIDGKG FFQVLMPDGRIGYTRNGTFSQNADGVLTTSSGYVVQPEIQIPPEATSISISRDGIISV TLPDAVEAEEVGQLTLAQFANPRGLEPVGETFVVESTASGAPVVGNPLEDGMGDLVQG ALETSNVNVVQELVEMIEAQRAYEINSRSISASDEMMSYLANNL" gene 749540..750205 /locus_tag="RTM1035_03710" CDS 749540..750205 /locus_tag="RTM1035_03710" /note="COG2063 Flagellar basal body L-ring protein" /codon_start=1 /transl_table=11 /product="Flagellar L-ring protein" /protein_id="jcventer:1101493006647_RTM1035_03710" /db_xref="CDD:32246" /translation="MMRRFTCTAAALIALAGCSTKIEEAESELYAPVYPVEEVQQSRL MPTGSIYAGYSNGLFVADRRARAVGDILTVEFSERFAASKSQAAGSSKTDSFELDLPD VLSFGFDDGRLTSGTTRSYAGRGNATQSNSLTGRVSVSVVRVLPGGNLEIIGQKQLTL NNGQEYIRLRGVVRPTDISADNVVRSDRIAHAEIKYVGAGDVADTAKQGWLRRAFETV SPL" gene 750202..751329 /gene="flgI" /locus_tag="RTM1035_03715" CDS 750202..751329 /gene="flgI" /locus_tag="RTM1035_03715" /note="COG1706 Flagellar basal-body P-ring protein" /codon_start=1 /transl_table=11 /product="flagellar P-ring protein precursor I" /protein_id="jcventer:1101493006647_RTM1035_03715" /db_xref="CDD:42119" /translation="MMGAGMLRFLLLLVCLVPGAALADRLKDLADVAGVRSNPLVGYG LVVGLNGSGDGNSGLTRQSMQSIISRLGLEVGTNDLDAKNAAAVMVTAELPPFLKPGQ VLDVTVSTAGKAKSLQGGTLLMTPLMGADGEVYAIAQGNMVVGGLGVQGGDGSSVVVN VPTVGRVPRGATVERMVETSFLETEYFVLNLNRPDFSTASNVADAINAQFGDGVAVAF DGSSVRVRAPADPAARVPFMGLLQDIEVDPAAPPAQVIVNARTGTVVIGGMVRVTPAA VSHGSLTVRVNEDFNVDQAATVVNGQDGGVVVPGNAVVTPDTQIDVEQENNPAFVFDP GVSLASLVDAINAVGASAADLVAILEALHRAGALRAELIVI" gene 751343..751669 /locus_tag="RTM1035_03720" CDS 751343..751669 /locus_tag="RTM1035_03720" /note="COG3951 Rod binding protein" /codon_start=1 /transl_table=11 /product="FlgJ" /protein_id="jcventer:1101493006647_RTM1035_03720" /db_xref="CDD:33732" /translation="MTLPPLATAFDARQTASLSDDRISAKATRDEDRLRGAAEGFEAL FLNQILQSGRAASFGDSLTESSATQTAQSLLDSTLTEVGAGRSGLGLSEAIYRQFSAH LGGVQE" gene 751673..755680 /locus_tag="RTM1035_03725" CDS 751673..755680 /locus_tag="RTM1035_03725" /note="COG1256 Flagellar hook-associated protein" /codon_start=1 /transl_table=11 /product="FlgK flagellar hook-associated protein 1" /protein_id="jcventer:1101493006647_RTM1035_03725" /db_xref="CDD:31448" /translation="MVDLMDIGRGGVLAYRTALGVTGENIANVDTAGYRRRDAVMQEV GVGGGVDVVDIRRAFDGLVAARSRDAQSTLGAAETHLSHVQALEDRLLPGEGGLPDLL DGFFDALDGLSQVPEDQGLRQAVLSAGTALAGGVADLAEGIDVLTRNVREETAQTVER ANTVLSGLAEVQEQLAQVTDERARNPLLDQRDRLLVNLAELVAIDVEMDDAGRATVRL GADGSGPMVLERGRAGRIEVGTAGRYTVTSADTKAVEVQTTLRGGMLGGLANAAGAMA QAASDLDLWASRMAEEINAVHAQGLTPTGGRGGALFSVSGWEATPGALMRGTGAASVT ITDATVMPAGPLTLVQDAPSGLWQARDAAGQVLATGEQTLSLPGLRIEMSGVPLDGDR ITLARQDASARHMTLVLNDPQGIAAAGTLTVSAVPGNRGTATLSATVLSAQGTGPRDL SGVLGENPVEFLNAGVIGVIAAGHADAALSVQPRLAAMDLGPLAGANPQALSLTTPEG VAQFALPAGLTTDALAAALNSGAVETADGQRLAAFGLLAEAQGDTLTLMARDGVLPLV ASLATNLGSVAGVVVADAAPAAVLSVFTRDGRQLSGPPLGATEAAALLTQENGFHADA AYSADYLDGAAPYGGLSLGRQSVGGDHVALLGQAGGIAAWIGTIPAPANPSVEVGYEG ATQSSTLRLPEGANAAWMAQELTTALPVRAEAETRLALALPTSGVLSFQLSGQNLTPV TISADMGAVGVAGLQAAINAQSGATGIRAERAPNGGRLVLVEDQGADISLSRLTHSGG EAALLTRLAPDGAALGTVSLGAGGPDAARISGTVRLSGSAGFGVTENGVLQVAAPDGF ENGLITRQTGAAGAQVTLTPAEPGPGDLSLRRIAVTGADGRVVTAEADPALGSGAAMA RALAADLRATAPASRITGAALPALPPDGAQMRVSLGAQDYGIRMSGGAPVVSGPEEGR ITARFDENNRLILETEGGTLDGSALRLPSDAGEAARFGMGAGNAPVTTVIGQPFDAGS LPSSFTIKLNGQEHFVSVSAGAVVLPVTFPGTGYINTAFGRVEIEFSALDGEMMIEAQ PGAAAAGFETLGLRAEVTEDGALRLTATDDRVLGVENVATGGGSVLRLNSIPDEDLIV VMGGTGALRLAGQISDTPATERAREVRVLDATTGLVGLFDRDSGAHLASRTLDAAGTA RFGDLEITLGGGRVTGDRYLTAPNAGGAGDGRSVEAMANLRQRDGLTGRGGYATGFAS LQQRAGAQVTASESRVATAEAEAESAARAESELGGVDLDAEAAQLMQQQQAYQANAQV LSVARSLFDTLLQAI" gene 755689..756927 /locus_tag="RTM1035_03730" CDS 755689..756927 /locus_tag="RTM1035_03730" /note="COG1344 Flagellin and related hook-associated proteins" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein 3 FlgL" /protein_id="jcventer:1101493006647_RTM1035_03730" /db_xref="CDD:31535" /translation="MSIGTSFFHNVTTRNLSQVNERISDLQGQISSGVNDPRPSADPV RALRLSAAKEQQEALDRYSNNLERAGARLDQADTVLSEAGNVMRRVGELALRAASDTA TATERDSIGTEVRALRDSLLGLANARDESGRALFGGYGTQSDPFRDGPGGVVYQGDGG QSRLQVSESLSLPTGLSGDAVFAIGSEGGDVFAVIDDFLASLGTASSAPRASVTGAGQ LDLDLTLSRAPAAWSMTLEGPLGSTTIPFVAAEGAMSGAVEAINAQTAATGISAALDP ETGGLMLTAQGDVKVSNIARAPDAGGVLMVARDAEGGTQALVPFARTRDAVIDRLRGA SEHLIDQRTQLGALSADAARQSDVIDNRKLAMSQAVSGLEDLDLANALTRLQQSMLTR DATQQAYVRITQQSLFDFLR" gene 756978..757754 /locus_tag="RTM1035_03735" CDS 756978..757754 /locus_tag="RTM1035_03735" /note="COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /codon_start=1 /transl_table=11 /product="possible invasion protein" /protein_id="jcventer:1101493006647_RTM1035_03735" /db_xref="CDD:29556" /translation="MRHLILLCVALFWVPSLSSASTANCEALATQAAERHGLPKGLLR AIARTESGRALGDTGTRAWAWTSNVRGKGYYYSGKDEALTHLRQLVSRGVRGFDVGCM QLNYRWHGDNFATLEEMIDPVQNIEYAARYLSELRAETGSWDAATRYYHSRDPRRGAA YLGRVQAVMARLGPVEAMPAVERQSEAARAAPMVTGPSLPPREAPRLADPAPREDRRF AGAAPLVSRVQNVRYWETASLPEGAVPVMPMRKTPQKTRR" gene complement(758002..758742) /locus_tag="RTM1035_03740" CDS complement(758002..758742) /locus_tag="RTM1035_03740" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Integrase, catalytic region" /protein_id="jcventer:1101493006647_RTM1035_03740" /db_xref="CDD:40748" /translation="MPQGRADEQRLTDDIIELADQYGRYGYRMVTGLLNNAGWCVNHK RVERIWRREGLKVPQKQKRKGRLWLNDGSCVRLRPERPNHVWSYDFVQDRTADGRVYR TLNIIDEYTREALMIRVDRKLNSTDVLDALTDLFILRGPPEYIRSDNGPEFIAQKVRD WIAAVGAKTAYIEPGSPWENGYCESFNARFRDELLNGEIFYSLKEAQILIEQWRVHYN TVRPHSALGYRPPAPESIVPLDQRPTMH" gene complement(758850..759128) /locus_tag="RTM1035_03745" CDS complement(758850..759128) /locus_tag="RTM1035_03745" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Transposase and inactivated derivative" /protein_id="jcventer:1101493006647_RTM1035_03745" /db_xref="CDD:41572" /translation="MAGKREKPEEIVSKLRQVEVLQGQGATIAEAVRQIGVTQQTFYR WRKLYGGMGRSQLARLKELEKENQRLRRAVSDLTLDKLILTEAAKGNF" gene 759413..760174 /locus_tag="RTM1035_03750" CDS 759413..760174 /locus_tag="RTM1035_03750" /note="COG1291 Flagellar motor component" /codon_start=1 /transl_table=11 /product="Flagellar motor protein MotA" /protein_id="jcventer:1101493006647_RTM1035_03750" /db_xref="CDD:31482" /translation="MDIASLIGLIGALGMVVGSMLAAGGLGPFIDVASILIVFGGTFF AVMYKCTMPIFLRSFGAVGKAFMPKAPSKEELITKMVELSDVARKNGLMALENQEVPD KFFSKGLQMLVDGADESKLVKQLSDEIKAMKVRHGEVHEALRGWIDIAPAMGMIGTLI GLVQMLGNMADPKAIGPAMAVALLTTLYGAFIANVMVGPVLSKLEGYTASETAYRDMV LAGLRNIAKGESGRNVQEQMVAVLPPKLQTKLLAA" gene 760192..761343 /locus_tag="RTM1035_03755" CDS 760192..761343 /locus_tag="RTM1035_03755" /note="COG1360 Flagellar motor protein" /codon_start=1 /transl_table=11 /product="flagellar MotB protein" /protein_id="jcventer:1101493006647_RTM1035_03755" /db_xref="CDD:31551" /translation="MARKPIPLPVPVEDPEDECPKCPPKGAPAWMATFADIATLLMAF FVLILSFAEFNQPKFKMVAGSLSMAFGVQRQVPVMEQPKGTTILDLSFSPSPEMSVTE QMTQDTTETEQPEIQRPVTEEDGKGAAEGEGADAPGQSEAREMAEALQEALQSGQVKV ESREGEVVMTFDAPDAQSLPGQLTEAAEALQQAAEATGQSTSDVMMQGLADNIQEMAE VMQGKAEAETQAGQSARSAAIADAQLQVALQQEIGEGLVSVEQREDKVVITVGEGGAF PSGGADLTDEARDVMARLAFAAMGEASEIVVTGHTDSVPLGGASPYRDNWGLAAARAS SVVRELSGSGLIEPERLTATSRGESLPVAENDTAAGRAQNRRIEIEITY" gene 761403..763028 /locus_tag="RTM1035_03760" CDS 761403..763028 /locus_tag="RTM1035_03760" /note="COG1345 Flagellar capping protein" /codon_start=1 /transl_table=11 /product="possible flagellar hook-associated protein 2 (filament cap protein)" /protein_id="jcventer:1101493006647_RTM1035_03760" /db_xref="CDD:31536" /translation="MENEILTALNRGGTGINIAELADSLTQAEIAPRRALIAERIDRA EVRLSGYDRLRGQAEQMGDALELMRGLSSRSLSSDNSAVSVTVSDPGKVDLQNARIGV SQLAQSQVLSFVGFSEAEAEIGAGALTVEFGNWSADVPPVFSAGTRTAQTITFQPGSS LADMAEALSSLDGLSARVIDLGDGTFSLGVISETGSQNALRLSVAADADPRMAQFDIS ADPGAVQVQGAQDAKLSLNGIAVTRSSNQIDDLLPGVTLNVTGQTLSDANLSGRANVE GALEVMQSFVDIINATQGLVKSLTARGFGEGGVAGDLAGDSLADGVLRGMQSVLSRGF GVKGVHLSDIGIRTERDGSLSLDADRFSTALTANPALLDPLIRDDLVGTTVQISGTPG SGATAGRYALTRDAATGEATLAGVALIGSAQANGDWAYRVPSGPMRGLTLTVATGTER AEINFQPSMVGSLQSYLSGILADGNALAQREDALGASIVTETTALEALNLRSEEVRTR YLGQFTQMEMIVTQLNSTGDYLTNLVEGWNADR" gene 763052..764086 /locus_tag="RTM1035_03765" CDS 763052..764086 /locus_tag="RTM1035_03765" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03765" /translation="MARHQGKASGMAEWHVVYQVFGGAPLGACPTLSHATVGVEEFAE LREAALSVDGVLLIPGAQVTLRGAACTVLGSGRAQPGIPLLDVIEAKGEARDLVLLRQ EDTGETLFLYPQAVPHAPGMVALVVDLTAAAYRLDAGMPLGLVAGTGILTPTGERNVQ TLVAGDRVLDTSGAERVVIWAGVTDVDLDPLTSNSVAPVRFEVGALGAGHPMRPLKLS PFHHLPVPEPGADGALCLGPALGFVGLPGVRVAHLAGRLAYHHLLLDHHALILANGTP VESLFPCPAMIARLAPELRAEAHAALAVAGHAGRAYAPLAETLGVWQTRDALALWPEA LPENEILLAG" gene complement(764109..764837) /locus_tag="RTM1035_03770" CDS complement(764109..764837) /locus_tag="RTM1035_03770" /note="COG1191 DNA-directed RNA polymerase specialized sigma subunit" /codon_start=1 /transl_table=11 /product="sigma factor FliA (Sigma-28 group, flagellar)" /protein_id="jcventer:1101493006647_RTM1035_03770" /db_xref="CDD:31384" /translation="MIAPQAYAEQQPNPTRLVEQHMPLVQRLAWHFHGRVGRFIEIDD LLQAGYLGLIDASQRYSVCDGVSFAAYATIRIRGSIIDHLRRNSNLCRNSITMRQKIE ATRRKLSQKLGREPEVPELAQSLELSTEEFQDWENRFQTNQLQSLDEVYTDHSLLFSD HGSTPEDEVEHIQLKALLQSALQDLPERSALVLQLYYVEELNVYEIAAILDVTTGRVS QIKKAAIGQLRDLMQARLHNTAAE" gene complement(764834..765943) /locus_tag="RTM1035_03775" CDS complement(764834..765943) /locus_tag="RTM1035_03775" /note="COG1419 Flagellar GTP-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03775" /db_xref="CDD:31609" /translation="MSTMTFRAPDSVTALEQVQRRLGPDALILSNDLIDGQVVIVASD DDPEALIKPAPRLRAVPTSPRVDVVIDEPIDPITPPPSSGLMTAAVTAAAPRLPSFLN AHAPKPFDRMLGEAKATAPATAPATATAPETPEAQAPDHKTPEPVAPALPDPLILRDR LLSAPRIVLVGPVGAGKSQVALQLALMRLTRTPGLTVEFCFCGTGSHGDGAVLAQKSH LLGMTTLFHTPDTLAAPQAGTVQIVVISGRGSDGTSLAEVALELPEARAALVVPGGLR PERIAALRQRWAERIDSAILSGSEDMPDATTDVAALRAVGLVPLWCASNDRLVEGLRV IEGDSATEPATNDDPAPLAQPMLFRHHGPDAESRS" gene complement(765955..768105) /locus_tag="RTM1035_03780" CDS complement(765955..768105) /locus_tag="RTM1035_03780" /note="COG1298 Flagellar biosynthesis pathway, component FlhA" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein, FlhA" /protein_id="jcventer:1101493006647_RTM1035_03780" /db_xref="CDD:31489" /translation="MAALSRASYRPQLGAGLLPVGILAVVAMMVLPLPLALLDIFFVF NILLSLLVLMVALYSYRPLDFSSFPSVLLIATVFRLALNVASTRIVLTSGHEGSGAAG KVIEAFGNFVIAGNFAVGLVVFVILVIINLMVITKGAGRVSEVSARFTLDAMPGKQMA IDADLNAGILTPEQARARRAEVGEEADFYGAMDGASKFVKGDAIAGILILAANILGGI VIGTAQHGLSLGQAAETYVLLSIGDGLVAQIPSLLLSIATAVIVTRVASTKDMTGHIG SQIGMHRAWLPVAAVMAIMGLIPGMPNLLFLIAALAAGGVAWATRKQLAPGETAPAAA PGQAPRRAALPAPGGASTGQPGTRPDTSGAITAEEVTDYAPITIQIGFGLIPLIEEGA GGALVSRITGIRREVSTAMGFVIPGVRIRDDMGLPANSYRIRIRQAIVAEDMAYPDRK LALPGGGTTRKLRGIEVKDPSFGMDAVWIQPHQQTEAEADDYVVVEPASVVATHLSQM LYAHAADLLGADDVQGLLDNLERSAPTLVESVVPKLVPLHVLTAVLRALLRERMPIAD LPRILEDLAGMSARLSEPQDMAEALRPALAPQLLQQIAPLKDSLHLITLAPELEDLLT RSKHESAGLIVEQGLTRQILGQLNEAQEALAGQGRQAVVVVSAALRRAFAAFLRTHGV DAIVMAVSELPDNRRVEIAASIGGARTAPPKPSN" gene 768268..768786 /locus_tag="RTM1035_03785" CDS 768268..768786 /locus_tag="RTM1035_03785" /note="COG3018 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03785" /db_xref="CDD:44078" /translation="MFSRLLRPLLLPLALMPLGACMSSGRAVDALPADASPRTEAVAQ LRDDLSGLPVPAAAQAPEVVQFTGLGLSQVSTQPGASINERRLMAIRAARLEAIRDLT EQIHGIRINSESTLHDQVLRSDTVRAVVAGEIRGARTLRITPKGDDSFEVVLALDPDT VRYILRAVRQRG" gene 768790..769878 /locus_tag="RTM1035_03790" CDS 768790..769878 /locus_tag="RTM1035_03790" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03790" /translation="MWGHVFRPQFWFLVLLSSLFCAAAGAKEATLWVEAEGRAYVASA ADQDAARRRAIGEALVTAALSGGASLRGHTAMDKGRITADLTILRPTGRILTHRVLSA QLQNGEWLVRVAAEVGPMPVGACASRRRMTVSATPPQIRVTPEASAWAEPLAQGLARD LMEVLRAHPDTDLERIAPVSAAPVAAALDYTALTRGQSLPAPGDHRMSQSITVDRQGK LLRLTLDLALMGQDGTNVTRRFQREAMVPRGGFAGYVAGQSRSRAETDLTAGLLQEVR AILDGLACQPAEARLALGADGLSVPLGRRHGLTRASLAFVDDPNDGFGLLEVVSLDNR HTTLRPLDPTRSPASFNGLRVYFVEAGL" gene 769875..770573 /locus_tag="RTM1035_03795" CDS 769875..770573 /locus_tag="RTM1035_03795" /note="COG1261 Flagellar basal body P-ring biosynthesis protein" /codon_start=1 /transl_table=11 /product="flagellar basal-body P-ring formation protein FlgA" /protein_id="jcventer:1101493006647_RTM1035_03795" /db_xref="CDD:31453" /translation="MIRGGIAVVLACLLPLDAAALDGQAVQAVIAQALRDAGQGGAPV VSANRPYPPCMAPLNVAPHQGGWQAVQVTCASPGGWSRVIRIEGGAAAPRLPGVTDDA PQRPALVLTESLPRGTVLEATHLREAPIGARARGDLVMSPETAIGRRLKSNLGAGQPL LARHLEHDWQVDVGGPVTIATDLGGIRIEAAGVALEPGQMGQDIRVTNAGSGEVVHVT VTGRNKVTVRPNIR" gene 770634..770936 /locus_tag="RTM1035_03800" CDS 770634..770936 /locus_tag="RTM1035_03800" /note="COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor)" /codon_start=1 /transl_table=11 /product="Putative FlgM, negative regulator of flagellin synthesis" /protein_id="jcventer:1101493006647_RTM1035_03800" /db_xref="CDD:32624" /translation="MVDSVNSSHAARPRLMPVSTEASPGGASGAKAHKPVSAVDSVKL SSSASVGVIEKMVEQGPPFDAERVSRIKEAVANGNYPVDAKRIADSIFQDYSAMTR" gene 770950..771330 /locus_tag="RTM1035_03805" CDS 770950..771330 /locus_tag="RTM1035_03805" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03805" /translation="MTYFEITLYALAVLCMITLPLLVAVSVRIARMLAHLSGQVLRLS DPEIDHIARRLGHRLGLSDEASLMSIADRMDEMRRDFDWLVSDRMIEQAIDMARFGQK PDSIARNTGISASELEAIRKLRKH" gene complement(771398..771694) /locus_tag="RTM1035_03810" CDS complement(771398..771694) /locus_tag="RTM1035_03810" /note="COG2154 Pterin-4a-carbinolamine dehydratase" /codon_start=1 /transl_table=11 /product="4a-hydroxytetrahydrobiopterin dehydratase" /protein_id="jcventer:1101493006647_RTM1035_03810" /db_xref="CDD:48350" /translation="MTEKLSDTARKTTLAPLLENGWAMVEGRDAISKTYKFSDFPEAM GFMTRAAIWAEKWNHHPEWFNVYSRVEVTLTTHDVDGLSSLDVKLARKFDGLVG" gene complement(771691..772875) /locus_tag="RTM1035_03815" CDS complement(771691..772875) /locus_tag="RTM1035_03815" /note="COG3146 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03815" /db_xref="CDD:32960" /translation="MTQDQITVTLHERLSDIGQVAWDACACPETAEGRPDDPFTTYRF LKALEDSRSVGTGSGWQPHYLSAEQHGQIIAVAPLYLKSHSQGEYIFDHNWAHAYERA GGRYYPKFQIAVPFTPATGRRLLTRPGYEDTGRAALIEGARDVALRNGLSSLHITFCT QAESEAGAALGLLPRRSQQYHWINRGYADFDAFLADLSSRKRKAIRKERARAAEFGGE IVTLTGDQILPEHWDAVWAFYQDTGARKWGTPYLTRAFFTRAHETLRDDILLILALRN GQPIAGALNLIGASALYGRYWGAIEDHPCLHFELCYYRAIEFAIAQGLQRVEAGAQGE HKLARGYLPVATHSLHWLRDPGFAEAVAQYLKAERAAVDQDIDILTSYGPFRKTAQED HE" gene complement(772931..773698) /locus_tag="RTM1035_03820" CDS complement(772931..773698) /locus_tag="RTM1035_03820" /note="COG0584 Glycerophosphoryl diester phosphodiesterase" /codon_start=1 /transl_table=11 /product="glycerophosphoryl diester phosphodiesterase, putative" /protein_id="jcventer:1101493006647_RTM1035_03820" /db_xref="CDD:30929" /translation="MSALPDGFRRIPLAHRGLHDVTDGRPENSRAGIAAAIAAGYGIE IDLQLSRDNQAIVFHDYDLGRLTAEKGPVRQRDAADLAQIPLLGGDEGIPDLPQILDL VAGRVPLLIELKDQQGQMGASCGTLEAATAAALAGYVGPVAVMSFNPDMVVQMAQLAP DTPRGIVTCAYTPEDWPLLRAETRARLRDIPDYEASGACFVSHDIDDLTAPRLDTLRA KGAAILCWTVRSPKAEAEARKHADNITFERYLPDHPA" gene complement(773695..774156) /locus_tag="RTM1035_03825" CDS complement(773695..774156) /locus_tag="RTM1035_03825" /note="COG0251 Putative translation initiation inhibitor, yjgF family" /codon_start=1 /transl_table=11 /product="Endoribonuclease L-PSP" /protein_id="jcventer:1101493006647_RTM1035_03825" /db_xref="CDD:30230" /translation="MSQFEKKLAEMGVTLPEAPAPAANYVPYVQAGDMLFVSGQIAKE GDTLLTGKLGDDLDVADGAKAARACAIALLAQVKAACGGDLDRLVRVVKLTGFVNSTA DFTQQPAVINGASDFIGEALGDAGKHARAAVSAPSLPFGVAVEIDGVFQIK" gene complement(774309..775907) /locus_tag="RTM1035_03830" CDS complement(774309..775907) /locus_tag="RTM1035_03830" /EC_number="4.1.1.49" /note="COG1866 Phosphoenolpyruvate carboxykinase (ATP)" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxykinase" /protein_id="jcventer:1101493006647_RTM1035_03830" /db_xref="CDD:29830" /translation="MTFGRVNPHFQLEDQGITGLGTVHYNLIEPALIEAALKAGEGTL GQGGTLLVTTGKFTGRSPKDKHIVKTDSVADTIWWENNAAMSPEGFDALYADMLTYLK GRDVFVQDLIGGADPAHSINMRMISELAWHSLFNRTMLRRPKRDALDSFIADFTVINC PGFKADPERHDCRSETVIAMNFDRKLILVGNTEYAGENKKSVFSLLNYLLPEKGIMPM HCSANHAEGNPVDTAIFFGLSGTGKTTLSADPNRTLLGDDEHGWSDRGTFNFEGGCYA KTINLSAEAEPEIYATCGMFGTIIENMVFDPETQELDFEDDSLTPNMRCAYPLHYISN ASETALGGHPKNVIMLTCDAFGVLPPISRLTPAQAMYHFLSGFTSKMAGTERGIDEPQ PVFSTCFGAPFMPRRPEVYGNLLREKIAKHGATCWLVNTGWTGGAFGTGSRMPIKATR ALLTAALDGSLNDVEFRKDPNFGFDVPVAVPGVAEVLLDPRRTWTDPTAYDAQAAKLV QMFADNFAQYVAFIDEDVRAASLG" gene 776332..776979 /locus_tag="RTM1035_03835" CDS 776332..776979 /locus_tag="RTM1035_03835" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, winged helix family protein" /protein_id="jcventer:1101493006647_RTM1035_03835" /db_xref="CDD:31088" /translation="MTLEAEGFEVETYNDGQQAFDAFSKKLPDMAVLDIKMPRMDGMD LLQRLRQKSQMPVIFLTSKDDEIDEVLGLRMGADDYVKKPFSQRLLVERIRALLRRQD AANGHVVVETEETKVIERGNLLMDPLRHSVSWKGQDVSLTVTEFLLLQALAKRPGFVK SRDQLMDVAYDDQVYVDDRTIDSHIKRLRKKLRMVDPEFSAIETLYGIGYRYNEE" gene 776979..778691 /locus_tag="RTM1035_03840" CDS 776979..778691 /locus_tag="RTM1035_03840" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensor histidine kinase ChvG" /protein_id="jcventer:1101493006647_RTM1035_03840" /db_xref="CDD:30987" /translation="MALVERIGVRSVQPRKDNDLVLGDDFVAPDRLDEGELNARRAKR GWFSFRDSSLTRKIITFNLIALNVLVVGILYLNSSRDNLAMQRANSLMVQTALIADVV EARLPVGAPVSFATGDGVDMATTLDNLDIQTGTEVFLFDRTGMLVGRKQGDTMGQDRT ATLPSTPMTDFLSRVWDRISSPFSGVDQVSASRVVEDVARDMVDLAVGGGVEVRTAET AQGVVLTVAAPVMQGNTPVAVVALANASGEIDKLARVERERVLQMFLIATLVSVGLSL ILASTISNPLADLAAAAEIGRDRNKGKGAKGRIRIPDLTARPDEIGRLSGALRGMVSA LYHRIDSNEQFAADVAHEIKNPLASLRSAVGTMRIAKRDDQRERLLEVIEHDVRRLDR LVSDISNASRLDSELVKEEQESFDLLKMLQNLGTYLGEEAQKNGIEFIMDFPPQPIVT TGLEGRLAQVFVNLITNAISFCEEGDAIRVWARRRANRVLVVVEDTGPGIPEQALEKV FQRFYSERPEGDFGNNSGLGLAISKQIVEAHDGVIWAENIRPTHADATSDPLGARFVV GLPV" gene 778696..779133 /locus_tag="RTM1035_03845" CDS 778696..779133 /locus_tag="RTM1035_03845" /note="COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism" /codon_start=1 /transl_table=11 /product="HPr kinase" /protein_id="jcventer:1101493006647_RTM1035_03845" /db_xref="CDD:29833" /translation="MTDAPHPADIILHATCVAHSGRAVLIRGASGRGKSGLALQLLAL GAGLVADDRTRLWLEAGRIMADAPETIRGQIEARGMGILQIPSTGPKPLALIVDLDTE STDRLPPLEHADLLGQSLPLVKKADHAHFPAAVLLYLMHGTLI" gene 779146..780075 /locus_tag="RTM1035_03850" CDS 779146..780075 /locus_tag="RTM1035_03850" /note="COG1660 Predicted P-loop-containing kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03850" /db_xref="CDD:31846" /translation="MPSEPDARTEAGKTRNRLVLVTGPSGAGRSTAIRALEDMGYEAI DNMPLSLLPRLLEAPKSDKPLALGVDARNRDFSTNALIEMIDRSDWHPGQPLQVLYLD CRAEILQRRFSETRRRHPLAPDESAEAGIAREFDLLAPVRVRADLLIDTSDMTPHDLR AELGRWYGPGDAESLAVSVHSFSYKRGLPRGLDMVFDCRFLRNPYWQPDLRALDGRVP QVAAHIAGDPLFAEFRQRVTEIVELLLPAYETEGKAYLSIGFGCTGGQHRSVAMAETL GATLAKDGWQVSIRHRELERRSGAEAPGPARDV" gene 780090..780482 /locus_tag="RTM1035_03855" CDS 780090..780482 /locus_tag="RTM1035_03855" /note="COG2893 Phosphotransferase system, mannose/fructose-specific component IIA" /codon_start=1 /transl_table=11 /product="PTS system IIA component, Man family protein" /protein_id="jcventer:1101493006647_RTM1035_03855" /db_xref="CDD:32718" /translation="MIGIVIVAHGGLANEYLRAVEHVVGAQTGVMAISIEGDHDRTAK QDEICAAADAVDTGGGVVLVTDIFGGSPSNLSLRACRPNDRRILYGANLPMLIKLAKS RHMPLPDAVRAALEAGRKYIDSHNVSEE" gene 780499..780774 /locus_tag="RTM1035_03860" CDS 780499..780774 /locus_tag="RTM1035_03860" /note="COG1925 Phosphotransferase system, HPr-related proteins" /codon_start=1 /transl_table=11 /product="Phosphotransferase system, HPr" /protein_id="jcventer:1101493006647_RTM1035_03860" /db_xref="CDD:32108" /translation="MDKVIRRMEIVNEKGLHARAAAKLVEVVEGFDARAEVSCNGQSA SGDSIMGLLMLAAAKGTTIDVEVVGPDATPLAEAVSALVADRFGESM" gene 780823..781710 /locus_tag="RTM1035_03865" CDS 780823..781710 /locus_tag="RTM1035_03865" /note="COG3176 Putative hemolysin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03865" /db_xref="CDD:32989" /translation="MNIKAQPESGTETGDTVLYTKYDRRSLTYANSFDNGLTSFIIRV MEWMTGKITILRMIRKFEKRGAPTGQAFWRAALDTMGIPLLTPDEEVAHIPLEGPVVV VANHPHGLVDGMILADLIGRRRSDYKILTRALLTGIDEVAASYMISVPFPHEPDAQRK SVEMRAKAMAHLKEGGVISVFPSGVVASSDTMFGPAIEREWNVFTAQMIRRSGARVVP IFFPGANSRWYQIANRTSATLRQGLLLHEVVHSCNNAQKPVVGAPISDERMAMLESDP RGFMEWLRAHTLSLGDSSK" gene complement(781714..782589) /locus_tag="RTM1035_03870" CDS complement(781714..782589) /locus_tag="RTM1035_03870" /EC_number="1.1.1.157" /note="COG1250 3-hydroxyacyl-CoA dehydrogenase" /codon_start=1 /transl_table=11 /product="3-hydroxybutyryl-CoA dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_03870" /db_xref="CDD:31442" /translation="MDITRIGVVGAGQMGNGIAHVMALAGYDVLLNDISAEALDRAMA AVRKNMERQVSRGKIAQDTMEAALARITTTQTLTDLGKTDLVIEAATEREAVKQAIFD ELLPHLEPHTILTSNTSSISITRLASRTDRPEKFMGFHFMNPVPVMQLVELIRGIATD KDTFNACLAVVEKLGKTAASAEDFPAFIVNRILMPMINEAVYTLYEGVGNVKSIDESL KLGANHPMGPLELADFIGLDTCLAIMNVLHDGLADTKYRPCPLLTKYVEAGWLGRKTG RGFYDYRGEVPVPTR" gene 782750..783583 /locus_tag="RTM1035_03875" CDS 782750..783583 /locus_tag="RTM1035_03875" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03875" /translation="MGFERLGHRPLDYRPVRYDGSKLVFRGPQRRLTGDFVACLGGTE TYGTFIDRPYPDLMERSLGTACVNFGWPNAGVDAFLKDEGLLDLVSAARAVVLQVPGA INLCNPFYRVHPRRNDRFLEASPRLRRLYPEVDFTEFHFTRHMMQRLADISPDRFAVL REGLQEVWVARMQALLERLTAPVVLMWFSRHLPGLGHEAAGIADDPAFVSRAMLRAVG ARAAHVVEVVISPEACAQGTRGMRFDPMQEGVAADLPGLLAHSEASRALSPVLETLLR K" gene complement(783632..784561) /locus_tag="RTM1035_03880" CDS complement(783632..784561) /locus_tag="RTM1035_03880" /note="COG2025 Electron transfer flavoprotein, alpha subunit" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein, alpha subunit" /protein_id="jcventer:1101493006647_RTM1035_03880" /db_xref="CDD:32208" /translation="MMSVLLLAEVTDGELSLDATAKAVTAAAKLGDVTALCCGASAAA AGAAAAKIAGVKKVLVAEDPSLGHRLAEPTAALIVSLAGDYSHIVAPATTDAKNVLPR VAALLDVMVISDASGVVDADTFERPIYAGNAIQTVKSRDGKKVISFRTSTFDAAGEQA AAPVETISATPNPGLSEWIEDKVAASDRPELTSAGVVVSGGRGVGSKDDFALIEGLAD KLGAAVGASRAAVDSGYAPNDWQVGQTGKVVAPNLYVAVGISGAIQHLAGMKDSKIIV AINKDEEAPIFQVADYGLVADLFTALPELTKKL" gene complement(784558..785316) /locus_tag="RTM1035_03885" CDS complement(784558..785316) /locus_tag="RTM1035_03885" /note="COG2086 Electron transfer flavoprotein, beta subunit" /codon_start=1 /transl_table=11 /product="electron transfer flavoprotein beta-subunit" /protein_id="jcventer:1101493006647_RTM1035_03885" /db_xref="CDD:32269" /translation="MKVLVPVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVE EAIRLKEAGKASEVIAVSIGVKQAQETLRTALAMGADRAILVVAADDVHQDIEPLSVA KILAKIVEEEAPGLVLCGKQAIDNDMNATGQMLSALLGWSQATFASSLDVDGDTAVVT REVDGGLQTIKVKTPTIVTVDLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVTPR LEITGTSEPASRAAGVILGSVDELVAKLKEVGAV" gene complement(785483..786055) /locus_tag="RTM1035_03890" CDS complement(785483..786055) /locus_tag="RTM1035_03890" /note="COG2096 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="cobalamin adenosyltransferase" /protein_id="jcventer:1101493006647_RTM1035_03890" /db_xref="CDD:32279" /translation="MVVLNKIYTRTGDAGETALGNGTRVAKHSARVTAYGTVDEVNAT VGLARLYAKDETDDALARIQNDLFDLGADLCRPDMERDKDAEYPPLRMASSQVDRLEA EIDAMNKHLEPLRSFILPGGSPLAAHLHLCRTVSRRAERLTVELSALENVNESALKYL NRLSDWFFVASRMANDSGKADVLWVPGANR" gene complement(786059..786265) /locus_tag="RTM1035_03895" CDS complement(786059..786265) /locus_tag="RTM1035_03895" /note="COG3115 Cell division protein" /codon_start=1 /transl_table=11 /product="Hypoxia induced protein conserved protein" /protein_id="jcventer:1101493006647_RTM1035_03895" /translation="MLQDPLFILMAVGCIAVAVILIRGISTFGKEGVENAKRSNKFMQ WRLIAQFIAIILILIFVYFRRQGG" gene complement(786355..787185) /locus_tag="RTM1035_03900" CDS complement(786355..787185) /locus_tag="RTM1035_03900" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="oxidoreductase, short-chain dehydrogenase/reductase family protein" /protein_id="jcventer:1101493006647_RTM1035_03900" /db_xref="CDD:40206" /translation="MTQRSILITGCSSGIGYNAAHGLRARGWRVFAACRQQADCERLR AEGFDSPRIDYADEASIEQAVAEVLTATGGRLDALFNNGAYACPGLVEDLPRDALREI FESNFFGWHDLTRQVIPAMRAQGHGRIVQCSSVLGLVTLGWRGAYVSTKFALEGLTDT LRIEMRDSGIHVCLIEPGPVTTKIRENARAPFERWIDWESAHRMAEYRDKLRPRLYGP YAKDNFELPPEAVTKKLIHALEAPRPKARYYVTTPTYLMGTLRRILPTRLLDWVISKA " gene complement(787225..787845) /locus_tag="RTM1035_03905" CDS complement(787225..787845) /locus_tag="RTM1035_03905" /note="COG3103 SH3 domain protein" /codon_start=1 /transl_table=11 /product="SH3, type 3" /protein_id="jcventer:1101493006647_RTM1035_03905" /db_xref="CDD:32917" /translation="MWRFILVSFAFLGWSFYELSGGADYRPSANSIQARALLDNHRPQ ARPLRVNVIELAQDGTPRQDAEVTRTITSLHDLGLSMGDKVVLTLASAEGDATPDPIS LNLPTVRVATPTALPDTPEVAQPVQAVALDGETLAAASDLRRVSGNSVNLRTGPGTGF GRVASLKRGTEVIVLRDPGEGWIKLRVVETGRIGWMAETLLTLASD" gene 788003..790309 /locus_tag="RTM1035_03910" CDS 788003..790309 /locus_tag="RTM1035_03910" /note="COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit A" /protein_id="jcventer:1101493006647_RTM1035_03910" /db_xref="CDD:30537" /translation="MSDLLDDPNMQPEAVSEPLRRAIGERYLTYALSTIMHRALPDAR DGLKPVHRRILYAMRELRLSSSGGFRKSAKISGDVMGNYHPHGDAAIYDAMARLAQDF AVRYPLVDGQGNFGNIDGDNPAASRYTEARMTAFAEALLDGLAEDAVDFRDNYDGTLR EPVVLPASFPNLLANGSSGIAVGMATNIPPHNIAELIDACLHLIKSPDARDDTLLQYI PGPDFPTGGVIVEPPESIAQAYLTGRGAFRLRCKWELEDLGRGQWQIVVTEIPYQVQK SKLIERIAELIQTRKVPILADVRDESADDVRLVLEPRSKNVDPEVLMGMMYRNSELEV RFSLNMNVLIDGVTPKVCSLKEVLRAFLDFRQQVLLRRSVHRMEKIDHRLEVLEGLII AFLNLDRVIDIIRYDEDPKAALMREDWGRTVPRAMSEADYVPPPPTAEAGLTEVQAEA ILNMRLRSLRRLEEMELRAERDTLMAERAGLEDLLDDVSLQWAAVADQLKEVKKTFGK THPIGARRTQFAEAGSVEDVPLEAMIDREPITVVCSQMGWIRAMTGHLDLSRELKFKD GDGPRFMFHAETTDRILVFGSNGRFYTLSASNLPGGRGMGEPLRLMVDLPNEAGIVDL LIHKPGRKLLVASDAGDGFIVPEEEVIAQTRSGKQVLNLKEPARALVCRPVTGDHVAC VGDNRKVLVFALDELPELGRGKGVRLQKYKDGGLSDATTFDLAAGLTWRDPAGRTRTE SNLEEWLGKRAGSGRMAPRGFPRDNRFT" gene 790402..791160 /locus_tag="RTM1035_03915" CDS 790402..791160 /locus_tag="RTM1035_03915" /note="COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family" /codon_start=1 /transl_table=11 /product="inositol monophosphatase" /protein_id="jcventer:1101493006647_RTM1035_03915" /db_xref="CDD:30137" /translation="MLKAARKAGRALAKDFREVENLQVSMKGAGDFVSRADIAAEKIL KTELMGARPTYGWLAEEGGEEEGQDPTRRWIVDPLDGTTNFLHGLPHWAVSIALEHKG EVVAGVIYDASKDEAFFAEKGAGAWMNESRLRVSGRSKMIESIFATGLPFGGRADLPE TLQDLARLMPTCAGVRRWGSAALDMAYVAAGRYEGFWERRLNAWDLAAGVIIVREAGG FVEPLRSGGNILADGEVICGNEAIFDKFAGVIRG" gene 791239..791604 /locus_tag="RTM1035_03920" CDS 791239..791604 /locus_tag="RTM1035_03920" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03920" /translation="MIHKRNFAHAVAIGVMVFMGAAPASANAILRDLDRSGMVQGDVN IMMRSAASLYSEGRGKVGDEVSWKNPNTRADGVVRIISVEGACVTLAHRFRPKGAEPA RGLRTKRCLMDGIWVLSAP" gene complement(791614..791982) /locus_tag="RTM1035_03925" CDS complement(791614..791982) /locus_tag="RTM1035_03925" /note="COG3791 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_03925" /db_xref="CDD:33586" /translation="MNTPLKVTCHCGAVELRVTLSNGLETARRCDCSFCRRRGAAAVS APLDKVEVVRGADNLTLYQWGTGTAKHYFCKTCGIYTHHQRRSDPNEYGVNLGAIEGV NPRDLDPIGWVDGVNHPSDR" gene complement(791979..792725) /locus_tag="RTM1035_03930" CDS complement(791979..792725) /locus_tag="RTM1035_03930" /note="COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)" /codon_start=1 /transl_table=11 /product="rhomboid family protein" /protein_id="jcventer:1101493006647_RTM1035_03930" /db_xref="CDD:31049" /translation="MFPIRDHNPSGRTPYVTYGLIALNVVIFLAYWPLFSDERALNVF FYDWAMIPAKVTQIGDFTGLLTSMFLHGGVLHLAGNMLFLWIFGDNMEDRMGHVPYLV FYIATGVVAGLAQILDSPGSMVPTVGASGAIAGVMGGYLLLFPRARVDILLIFIVFFR VITIPAAILLVLWFAIQVMAGLGSDPDMGGVAYWAHAGGFVAGVLLTLPIFLRLGGPL FWRATAGTPPNPEADYRFRRSSIPAVRKRR" gene 792851..793453 /locus_tag="RTM1035_03935" CDS 792851..793453 /locus_tag="RTM1035_03935" /note="COG1280 Putative threonine efflux protein" /codon_start=1 /transl_table=11 /product="Lysine exporter protein (LYSE/YGGA)" /protein_id="jcventer:1101493006647_RTM1035_03935" /db_xref="CDD:31471" /translation="MTMTQLAFALVLFLLPLAYSPGPGNLFFAANGARFGMRATFPAS FGYHIATWLVTAAIGFGFVGALEAAPGVFVLLKLAGALYVFWIAWGLLRAGARDSAIE ARPASFGDGAVLLLLNPKAYVIIALMFTQFLSVSDTNRTVLVLGITTIFTLNNLVAFT LWTMMGARLGQLFARAGSARALNTAFGVTLGAVALWMLLS" gene complement(793466..796909) /locus_tag="RTM1035_03940" CDS complement(793466..796909) /locus_tag="RTM1035_03940" /note="COG0506 Proline dehydrogenase" /codon_start=1 /transl_table=11 /product="bifunctional PutA protein" /protein_id="jcventer:1101493006647_RTM1035_03940" /db_xref="CDD:33955" /translation="MGIRMPYDTDIRRAIEFATYADESETLARLTAAANLSEADRARI CARGAALVRSIRGQSSPGLMEVFLAEYGLSTDEGIALMCLAEALLRVPDADTIDALIE DKIAPSDWGKHMGHSTSPLVNASTWALMLTGKVLKDEKPGPVGHLRGAIKRLGEPVIR TAVGRAMKEMGRQFVLGETIQGAMDRAAGMEKKGYSYSYDMLGEAARTDADATRYHLS YSRAITAIANACTQADIRSNPGISVKLSALHPRYEVAQREQVMAVLVPRLRSLALLAK SAKMGLNIDAEEADRLSLSLDVIETVLEEPALAGWDGFGVVVQAYGQRASHVIDFLYD LATRLDRKIMVRLVKGAYWDTEIKRAQVAGIDGFPVFTSKAATDVSYIANARKLLSMT DRIYPQFATHNAHTAAAILDMGSDKGAFEFQRLHGMGEALHDIILKAEGTRCRIYAPV GAHRDLLAYLVRRLLENGANSSFVNQIVNEDVAPEEVARDPFVAVNDPQPHLPKGPDL FQPERPNSRGFDLRHQPTLDRIEAARAPFAQHRWEAAPLIAGMAAPQTPETVENPADP ADMPGTVAWASKADIEAALAAAAPWNAPANARGVILNRVADLYEENYGEIFALLAREA GKSIPDAVAELREAVDFLRYYAANAPEEAPVGTFTCISPWNFPLAIFTGQIAAALAAG NAVLSKPAEQTPLIAHLAVGLMHKAGVPATALQLLPGAGDVGAALTSDARVGGVAFTG STETALKIRAAMAKHLAPGAPLIAETGGMNAMIVDSTALPEQAVQAIVESAFQSAGQR CSALRCLYVQDDIAPHFLEMLTGAMDALNVGTPWHLSTDCGPVIDEEARAGIAAHIQT ARAEGRLLHELKTPNAGTYIAPTLIKVGGIGEIEREIFGPVLHVATFKSGDLDRVIGA INATGYGLTFGLMTRIDDRVQHVTEAVHAGNIYVNRNQIGAIVGSQPFGGEGMSGTGP KAGGPHYLTRFTARAAPEQGEKWTEAMSANAAQKALDAANAAARTPRAALVLPGPTGE SNRLTSHVRPALLCMGPGADLAAAQARAVEGLGGVAVIATGRVDPEALVTMGGLSGVI WWGCESEARAYAGAMARRAGPILPLITGLPDTGHALHERHVCVDTTAAGGNAALLSGM S" gene 796999..797481 /locus_tag="RTM1035_03945" CDS 796999..797481 /locus_tag="RTM1035_03945" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="proline dehydrogenase transcriptional activator" /protein_id="jcventer:1101493006647_RTM1035_03945" /db_xref="CDD:31711" /translation="MMDQNEQLDLDRFDRAILRVLAGDGRISVTELAREIGLSKSPTQ ARLRRLERDGVITGYRALFDPIRLGLDHVSFVEVRLHDTREAALAEFNAAVSKIPEIE QVHLIAGNFDYLMKIRTQSMADYRRVLAEHISTLPHLANTSTYVAMQAVKENALSDVI " gene 797552..797634 /locus_tag="RTM1035_t05772" tRNA 797552..797634 /locus_tag="RTM1035_t05772" /product="tRNA-Leu" gene complement(798054..799448) /locus_tag="RTM1035_03950" CDS complement(798054..799448) /locus_tag="RTM1035_03950" /note="COG0534 Na+-driven multidrug efflux pump" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /protein_id="jcventer:1101493006647_RTM1035_03950" /db_xref="CDD:30880" /translation="MAEARAVFLEGNLFRHITVMALTSSVGLMAVFAVDFIDMVFIAM LGNAELAAAVGYAGAILFFTTSFGIGMAIAAGALVARALGQGDAELARAQAAAALVWG VVFGAVFAATVWLNLAGLAALMGATGETLDLAVHYLQIIVPSLPFLIVGMVGGAILRA HGDARRAMMATIWGALVNAVLDPILIFGLGLDLTGAALASVAARLVIAGTALIPIFRH HGGLVRPGLPEMSIAFVPIVTIAAPAILTQLATPVGQAVVTRAMASFGEAAVAGMAIV GRMTPVAFGVIFALSGAIGPVIGQNFGAGRMDRVRQAYRDGLLFCALFTLAMTALLFA LRGPIIALFGAEGVTRDLILLFCGPLALAFFFNGVIFVSNAVFNNMGHPFRSTWINWG RHTLGTVPFVLAGGALFGASGVLIGQAVGGVIFAGVAALMVRRMMDRKAGAPPPEKPF DRQARLMSLMHRRR" gene complement(800002..800631) /locus_tag="RTM1035_03955" CDS complement(800002..800631) /locus_tag="RTM1035_03955" /note="COG1335 Amidases related to nicotinamidase" /codon_start=1 /transl_table=11 /product="Isochorismatase hydrolase" /protein_id="jcventer:1101493006647_RTM1035_03955" /db_xref="CDD:29548" /translation="MDQTIYPQGSTALLCVDPYNDFLAEDGKMWPALSEVSKAVDLHA NLIKIRAAVREAGHPIFILPHHRHRAGDFEGWAHLTPFQAAAHDHQMFAEGSRGGDWY EGFGPDHGDIVVKEHWGASSFANTDLDVQLRQRGITHVIFIGAIANTCTEASARYAAE LGYHVTLVRDATAALSPDALHAAHEINGPTYAHAILTTAEVVGKLRSRA" gene complement(800755..802998) /locus_tag="RTM1035_03960" CDS complement(800755..802998) /locus_tag="RTM1035_03960" /note="COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /codon_start=1 /transl_table=11 /product="aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein" /protein_id="jcventer:1101493006647_RTM1035_03960" /db_xref="CDD:31718" /translation="MGRARTIARRSFLIGSAAILGGVAFGAYFVSRPIANPLRDGLAQ GEAALTPFVKITPQGITLIVPRADVGQGIASTQAMLIAEELDIDPATVTLDPGQPHQA YFNGVIVGESMPFPAWEHGAVANTMRDVMRNVARLTGSQFTGGSSSVADLHETLRLAG ATARETLKAAASARTGVQRADLRTEDGQVVLPDGTRIPYTELAGEAAAIAPFTDVTLR PASDWTRLGKPYQRLDIVAKSTGTQDYGIDLVLPGMLHATVRANPGRGGAMAGSNADA ALAMQGVRAVVAVNEGLAVIADNTWFAFQAAQALEVDWLPPDHPASSAEMWQALSAAR TDAFRNSRLRDDGDVEAALAGATVIEAEYRTPFLAHAALEPLSATVLVEAESVQIWTA TQIPAVVRDAAVALTGLDPSQVTLHALPAGGSFGRRLDHDYVVQAIQIAATMPGTPIK TTWSREEDMTHDYPRPLHMAVGRGAVGNGRVLAYDLDSVSPSLISSWFGRISSVPPGP DTMLVWGAFDQPYAIPNYRVTGYAAPQMIPVGSWRSPGACSNTFFHESFLSELIHAAG ADPLEERLRLIADPDSRRVLEAVGEMANWAGADIGPGRGRGIAFAHTHGVPVAEVLDV TLTERGIRIDEVWIAADCGTVFDPANAEAQLTGAAIFGLGHAMNCELTYENHAVQQTN FDAFEGMRLNQTPRFHTQLLGRAERVRGLGEPATAPAAPVLADAIFAATGRRLREMPF SKFIRFA" gene complement(803002..803364) /locus_tag="RTM1035_03965" CDS complement(803002..803364) /locus_tag="RTM1035_03965" /note="COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /codon_start=1 /transl_table=11 /product="isoquinoline 1-oxidoreductase, alpha subunit" /protein_id="jcventer:1101493006647_RTM1035_03965" /db_xref="CDD:32263" /translation="MKYGCGIALCGACTVHIGGDAVRSCQVSLGDVWADVTTIEGLGR PGALHAVQVAWIAHQVAQCGYCQSGQIMQAADLLARNPEPSDDDIDAAMSGNLCRCGT YPRIRAAVHAAASAMREV" gene 803647..804648 /locus_tag="RTM1035_03970" CDS 803647..804648 /locus_tag="RTM1035_03970" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006647_RTM1035_03970" /db_xref="CDD:47669" /translation="MDSPQTYSLFMGTDVSCRILGIDPQVMLETAGLAKLAQDRSELR VTAGQYFEAWNTIARLSPRRDFVPYLGVAISRGPVIPVFFTLSCAPNLETGLTRLAQF KSLLGPTRMQVFKDGQLLRAEYDSVDIHSPMPPSLGALQLVCMLENIRGATAHFVCPV AAGFDGSEEERRQIASHLGIMPERSATTFVTFSPEDAKRRFISENPALWADVEADLKL QLAAQNDPLPAAARVRAALADLMLSGRTGAEDVAISLGISRSTLQRRLRQEKTSFQAE LDATRQDIAIRYLTKTTLGVDAIALVLAYRDASSFSRSFRRWTGQAPGAFRQARSRG" gene complement(805010..805864) /locus_tag="RTM1035_03975" CDS complement(805010..805864) /locus_tag="RTM1035_03975" /note="COG1737 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="SIS domain protein" /protein_id="jcventer:1101493006647_RTM1035_03975" /db_xref="CDD:31923" /translation="MKIDEKLTQALPNLPRKLAVAARYVLDNPERIAVDSMRSVAQAC GVAAPTMQRLAQHMGYEGYDGFRQDFQKLLMGRGFGARVDALRSTFQSDSLAKLVSHM TEAAQNNIAEVAAHLEPKEVGAFVAAVRRSGRTYVIGAGSMYWAAGMIEATGRLAVPD LVSLPAGTVAASERISTISSSDTVLALGIAPYCAQTIDAMQYARRASASVYAITDRPS SPLAPYADGLFLAPTASPHYFPSAIAVQLVAEILLAACAAASGDASRHRLRQLDEIRR SSGAYLDE" gene 806046..806855 /locus_tag="RTM1035_03980" CDS 806046..806855 /locus_tag="RTM1035_03980" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006647_RTM1035_03980" /db_xref="CDD:47410" /translation="MRTYIKAALTAVVATLTSTAAMADALQDIKDAGKIVVGVKQDYK PWGYLTSDGELQGLEIDLAKDVAERLGVEVELVPVVASNRMEFLQQGRINLIIATMGD NEQRRQVIGMIEPNYYAGGTNVLAPKAAGLKNWEDLKGADVCALQGSYYNKRVTQLYG PNLVAFAGIPEATAALLNGSCIAFLYDNTWIESQLASDAQWAEFEMPFPTEDPQAWSI AVPLEELDQPYGQLMSEIVTDWHKSGYLIERNAANGIAPSPFLQAEHDRLK" gene 806935..807678 /locus_tag="RTM1035_03985" CDS 806935..807678 /locus_tag="RTM1035_03985" /note="COG0765 ABC-type amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="polar amino acid uptake family ABC transporter, permease protein" /protein_id="jcventer:1101493006647_RTM1035_03985" /db_xref="CDD:31108" /translation="MDFVNPLIDWLRPDWFLNLAVVSDDYNRGRYVSGLWMTIKLSVV SIFLSLVVGVLGAAVQGAPSRTLRVAVGLFVAFFRNTPPLVQLYFFYFAIGTVLRITG ENGLPQPLISNFGWAIISLSLFAGALNVEIFRAGVEAVPRSTVEAAEALGYTRLQIYT DIVLPLAVRVSLPALGTNLVNLVKTTTLAYAIAVPELLYVSAQIWSEDLNVREMMNVL LVSYVGLVAILVWVLHRWEKALRIPGYGE" gene 807675..808550 /locus_tag="RTM1035_03990" CDS 807675..808550 /locus_tag="RTM1035_03990" /note="COG0765 ABC-type amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="polar amino acid uptake family ABC transporter, permease protein" /protein_id="jcventer:1101493006647_RTM1035_03990" /db_xref="CDD:31108" /translation="MTMYSPHLKPKVRGHMPVMLPMRLRADGLPLADRLFNLWTLTAL VLALAAVLIGPAFAQLATPDERTIHMILLEWTPTLAKGFGFNVLISVLSMLIGTVMGV FLGVLQVSQIRPIRQSAWLVTQFFRNSPWLVLLFYCILLIPFQFEIFGVKIPFPGWIK AVIGLSLPVMAYTSEFMRGAILSIPTGQWESAESLGFSRRMTLTNIILPQTVKRVLPS WMNLYAVLTMATPLVSIIGVDDVMALTRAALSAEGRADLLIPMYLYILSWFFLYCYPI SSLTRVLERKYSVKL" gene 808547..809308 /locus_tag="RTM1035_03995" CDS 808547..809308 /locus_tag="RTM1035_03995" /note="COG1126 ABC-type polar amino acid transport system, ATPase component" /codon_start=1 /transl_table=11 /product="glutamine ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006647_RTM1035_03995" /db_xref="CDD:31323" /translation="MSEASMTWTPQQPIVSLKDVHKSFGAVEVLRGISLDVMKGEVVC IIGPSGSGKSTLIRCINALNDIQAGSITVEGLEVNDPKLDKLALRKKVGMVFQQYNLF PHKTALQNVMMAPIKVLNQDRAEVEKRALALIAKVRLNGKEDAYPGELSGGQQQRVAI ARSLAMNPDVMLFDEVTAALDPETVKEVLTTIKDLAADGMTCILVTHEMGFAREIADC IYFTDRGVIVESGPPATFFDNAQDPRTQQFLAQIL" gene 809315..810703 /gene="fumC" /locus_tag="RTM1035_04000" CDS 809315..810703 /gene="fumC" /locus_tag="RTM1035_04000" /EC_number="4.2.1.2" /note="COG1027 Aspartate ammonia-lyase" /codon_start=1 /transl_table=11 /product="fumarate hydratase" /protein_id="jcventer:1101493006647_RTM1035_04000" /db_xref="CDD:28773" /translation="MTYRTESDSLGDVQLPDDTLYGSNTARALENFAGMGLPLSAYPD FMRAMALVKRAAAMANQEVGALASDVADAIIAACDEIVAGGHADQFPTALLEGSGGTS TNMNFNEVIANRAGQILGDKPGCYVRVNPNDHVNCSQSTNDALPTAVKLACVLTGPSI TAAIEILISALRVKADETNDMLRTGRTCMQAAQPMTWGQYFLGHASALSRALTAVQSA VETLRTVPMGGTAIGTGLGAFPGYRRAIAPALSEVFGMEIRLAEDPFDAMHAADGFVR LSAELRNLSAIMAKLAADLVILGSDGASGLGELRLPPVQPGSSIMAGKVNPVIPMTVQ QVWMRVHGHDAAIAIAAQSGQMEINHFEPLIALSLFEQMALITAAAQRFAARCIVGLE VDEDRSYLNLAQSFGVSTVFLKELGYTRVSAMAKRALAEGKPLADIAVEDGLLSKTDI RDVLRHASVPAD" gene complement(811030..812427) /locus_tag="RTM1035_04005" CDS complement(811030..812427) /locus_tag="RTM1035_04005" /note="COG0534 Na+-driven multidrug efflux pump" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /protein_id="jcventer:1101493006647_RTM1035_04005" /db_xref="CDD:30880" /translation="MVEVVARFVEGNMMRHVSTMSLTSSIGLMAIFAVDLIDLFFISM LGQDALAAAAGYASVVMFFASAINIGLSIAAGSLVANSLGAGKTVPAREHAFSASIFA IAFGLLIPLLALPNLGYLLGLLGASGEVADRAADYLWIILPATVFSGLGMTTVAVLRA YGDSRRAMFPSLTGAMVNGVLDPIFIFTLGLGLEGAAWATVAARFATMLMALWPTIRL YNGFAIPRIGCFLYDIREGMQIALPAILATVATPVGTAIVTREMAKYGTDAVAGMAVI NRMSPVVFAVVLALSGSIGPIMGQNFGAGRRDRVREAFYDAVIFSAIYVLVVSIILFL FRGQIADFFGAKGEARALILLFCWPLALASFFNAVIFVASASFNNLGHPSYATWVNWG RQTLGTLPLVVIGGALYGATGVLIGQAVGGIIFALIAGWLSLWMITEQSHPLKQLKCR FQLQRRMHEMYQEVG" gene complement(812609..813991) /locus_tag="RTM1035_04010" CDS complement(812609..813991) /locus_tag="RTM1035_04010" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase family protein" /protein_id="jcventer:1101493006647_RTM1035_04010" /db_xref="CDD:31216" /translation="MLTVVQAFDRAPIAQIETDDAAALERKLQAASRVFGERDGWLKP HQRVAILRRLAVLMEGRRDHLAMQIAREGGKPLPDAIVETNRAIDGVQNAADELRTFA GREIPMGLSAAADDRWAFTTKEPIGIVAAISAFNHPLNLIVHQVAPAIATGCPVIVKP ASATPLSCLDVVALVHEAGLPEPWCQTFVTNDNTLAEKLATDSRVAFLSFIGSARVGW SLKAKLAPGTRSALEHGGAAPAIIDRSADLGKVIEPIVKGGYYHAGQVCVSTQRIYVH NDIADDFTHRLVARVDTLRTADPTLEDTEVGPLILPREADRVADWTRAAVSGGAVLAT GGERLSETTLSPAVLLDPAHDAKMSMLEVFGPIVAVYRYDDLDDAIRRANALPTAFQA SIFGQDIGVALRAANRLDASAVMINDPTAFRTDWMPFAGRRESGYGTGGIPFTMQDMT QEKMILMRKS" gene complement(814035..815690) /locus_tag="RTM1035_04015" CDS complement(814035..815690) /locus_tag="RTM1035_04015" /note="COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04015" /db_xref="CDD:30378" /translation="MPKGSDLFVAALENEGVDRIFGVPGEENLDFVEALRSSRIELVL TRHEQAAAFMAATHGRLTGKPGVCLATLGPGALNLVTGAAYAHLGAMPMILITGQKPV MSAKQARFQIVDIVASMRPLTKMTRQILSPAAIPAAVRDAFRVAAEERPGPVHLELPE DVAAANAEGASVIPRHSYDRPVASAAALDNAAKMILAAKRPLVMIGAAGNRPALVEPL SGFMARTRLPFFNTQMGKGAVDGGSNLYVGTAALSEGDYVHEAIERADLIVAIGHDTI EKPPFLMKNDGGPRVVHVSYESATVEQVYHPDIEVIGDIGASVKGLAERLEGRVSPDE GMLQLRQRILARLNDRAEENRFPVTPQRLVHEVRRVMPEDGIVCLDNGMYKIWFARNY RTHVANTLLLDNALATMGAGLPSAMMAAILHPERRVMAVCGDGGFMMNSQEMETAVRL GLNLVVVILNDSAYGMIRWKQSVDGFPDFGMTFGNPDFVRYAEAYGAKGSRVRAVEDL FPVLEAAFEGGGVHLVDVPIDYSENTRVLVDELRNRTPDVECS" gene complement(815869..816201) /locus_tag="RTM1035_04020" CDS complement(815869..816201) /locus_tag="RTM1035_04020" /note="COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04020" /db_xref="CDD:32481" /translation="MVIEIATFQLAPGKAAEFFKAMENAAIHLRKAQGYRGHTVGLGV EAPGTATLIVAWRSYADHVEHFEPSTAHEQFVGILDGLYDGEISVMHVEAESPQGSVS LPIFQSEA" gene complement(816296..817270) /locus_tag="RTM1035_04025" CDS complement(816296..817270) /locus_tag="RTM1035_04025" /note="COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="zinc-binding dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_04025" /db_xref="CDD:30949" /translation="MSLTEFGGPDAFALSEYETPKASAGEVLVRVHATSINPLDYQVR RGDYPDLVPLPAITGHDVSGVVEAVGSGVSAFKPGDAVWYTPQIFGGHGSYAEYHVAS EAIVGHKPAGLTHLEAASLSLVGGTVWEALFTRAGLRLGETVLVHGAAGGVGHVAVQA AKASGAFVVATASGYDADFVRSLGADVVIDYRTEDYVAVVNRETGGVGVDVVLDTIGG DTLERSPRVLAQLGRIVSIVDIPNPQNLIEAWGCNASYHFVFTRQNRGKLDELATLVD RGLLKPHVGAVYPLAGIPDAHALLERPRNGVRGKIGIAVVDENASSQP" gene complement(817430..817621) /locus_tag="RTM1035_04030" CDS complement(817430..817621) /locus_tag="RTM1035_04030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04030" /translation="MPYPNDLASMPQDIEVPFVVIGLIKVNQPVCMPRSGAQCLGPSL VMNGALSSTCHLLSTVCAN" gene 818344..818595 /locus_tag="RTM1035_04035" CDS 818344..818595 /locus_tag="RTM1035_04035" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04035" /translation="MSQFQPFIVSLVVGLVIGMIYGLVSVRSPAPPIIALLGLLGMLA GEAGVQWLKGHASVVQSVLHAKSFALPTRDSSARKSDAS" gene 818852..820441 /locus_tag="RTM1035_04040" CDS 818852..820441 /locus_tag="RTM1035_04040" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04040" /db_xref="CDD:45869" /translation="MLEKMSEDTGSARPLSYPVFRALWIATIVSNVGTWMHDVGAGWL MTSLSPSPLLVALVQTATTLPMFLLALPAGALADIVDRRKMLLAAQVLGLLAAMTLAM LTAAGLVSPGILLAATFMLGIAAALSAPVFQAIVPELVDRQALPDAIALNSLGVNISR AVGPALGGAIVALAGIPAVFALNALSVLGVLVVLVTWKRPQAARTLPPEHFFGALKAG YRYTRHSPALRLVLIRAMGFFLFGSALWAMLPLIARRGLGLDAAGYGVLLGCMGAGAV AGAILLKRVRTIVPANPVSVAATLLFALAMLALARASHAWVAGAVLFLAGLGWIGMLT SLNVAAHMAAPGWVKARALAVYLLTFQGAMTCGSVLWGTLATGTSVATALVIAGVGQI LAVVLAVRWRLPQHSGTDLAPSHHWADPVVSVQPGMDRGPVLIEIEYWVEPSRLVEFV SALRRFKSVRHRDGAIRWDVWEDVAEPGRIVETFVVESWVEHQRQHERVTRADQLDQD LLNEYHLGDKPPVVRHLLRPP" gene 820527..821360 /locus_tag="RTM1035_04045" CDS 820527..821360 /locus_tag="RTM1035_04045" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase" /protein_id="jcventer:1101493006647_RTM1035_04045" /db_xref="CDD:30941" /translation="MAFVTTSDGTRLFYKDWGPKDAQPVMFHHGWPLSADDWDNQMLF FLSHGYRVIAHDRRGHGRSDQTDSGNDMDTYAADVAEITWALDLHDVIHVGHSTGGGE VARYAARAERGRVAGAVLIAAIPPVMVRSDANPDGVPPEVFDGLRAALSANRAQFFLD LPSGPFYGFNRHGAKVSQGLIDNWWRQGMSGGAKAHFDCIAAFSETDFSEDMEAITAP VLILHGEDDQIVPISNSAHKAIWLVRDGTLKSYTGLSHGLFATHPDLINADLLAFARS A" gene 821454..822038 /locus_tag="RTM1035_04050" CDS 821454..822038 /locus_tag="RTM1035_04050" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase" /protein_id="jcventer:1101493006647_RTM1035_04050" /db_xref="CDD:48606" /translation="MPTVYYAPAGCSLVPHIVPKWIGAPYKAVKVRVGSMELLAINPA GTVPTCREDSGWLLTRAGAILDDLAQKLSEAGLSGGDSIRAKCWSAFLTADLHASFWL IFMPNRHTIYKSDAARQATVGAGLKLASQHLGIPNRHLGGRSVIDAYAFPMIRWGAKI LPGGLQNFSDVQRLRDRIAAGAAVQKIIAREGRA" gene 822059..823573 /locus_tag="RTM1035_04055" CDS 822059..823573 /locus_tag="RTM1035_04055" /note="COG0346 Lactoylglutathione lyase and related lyases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04055" /db_xref="CDD:30749" /translation="MMSGLHHVTGITADVQANVDFYVGFLGLKLVKRTAGYADSEQLH LIYGDGLGSPGSLLTFLVWEATGRGRTGIGQVLEIALAVPPASIESWLSKALAASVPF EGPSREFGEPVLRLRDPDGLIVKLVGVALSTPAPLLEGPIRLRGVTVLTDKARETAEF LKVFGYKYAQHTGLTQRMTSETDVVDVRDAPGFVPSVAGAGVPDHVAFRAKDADDIRT LRQALLDHGPTEIHDRKYFLSLYVRDPAGILMEYATDGPGMTIDEAPEALGRTLFFPP HVAGHTQDIEAMLPQFSMPGDERFPVRKLPFVHRFNRPERPDGTTLVLLHGSGGNEAD LMPIARRIAPQATLLGVRGRATEEQINRWFRRFDATTFDQADIQSEAEAFAAFVEDAV INYGIDVTRLFFLGYSNGANFLAAVMQVYPSAVRRAVLLRAVQVLDPLPAEDLSGTHV LMVNGQDSYAPVLADNLRAQGAQVDTRTVPSGHELTAADVAEVADWLGLGYAGQ" gene 823738..824661 /locus_tag="RTM1035_04060" CDS 823738..824661 /locus_tag="RTM1035_04060" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="extracellular solute-binding protein, family 3" /protein_id="jcventer:1101493006647_RTM1035_04060" /db_xref="CDD:40584" /translation="MERVSKITAKMLGPFRYFPSVGMPGPDFRSLLWLPTWVGISAPV ADTKESLAMTYILRAATLAGFVAASAAAAQAEDGTLTVGMSGAYFPFTFVRQDVLQGF EVDVMNAVGEVADLDIQFETMSFSGLVGALDAGRIDTIANQITITPEREAKFAFTEPY VIDGAQVVTRKGNDAIAGVDDLRGKIVAVNLGSNFEQLLRDLPFAGEVEIRTYDSNIE QDTALGRVDAFVMDRVSSAQVIKQSPLPLQLAGQPFSEIRNALPFRDDEDGRALRSKV DAALVVLRENGTLTEISEKWFGSDITTLLAE" gene 824689..825339 /locus_tag="RTM1035_04065" CDS 824689..825339 /locus_tag="RTM1035_04065" /note="COG0765 ABC-type amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine" /protein_id="jcventer:1101493006647_RTM1035_04065" /db_xref="CDD:31108" /translation="MVGLMPVILSYVPLTLAMASVAMVCALVLSALLAVERVVRVPIL DWLVIVFISFFRGTPLLVQLFLFYYGLPQVLSVLTRIDGVTAAILGLMLHFAAYMAES IRAAIISVDRSQWEAGQSIGMTQWQLMQRIILPQAARVAAPTLVNYFIDMLKATSLAF TLGVTEMMGAAQKEAAGSFLYFEAFLVVAVIYWGMVEALNQGQKVLETYLDKAYAR" gene 825336..826085 /locus_tag="RTM1035_04070" CDS 825336..826085 /locus_tag="RTM1035_04070" /note="COG1126 ABC-type polar amino acid transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter related protein" /protein_id="jcventer:1101493006647_RTM1035_04070" /db_xref="CDD:31323" /translation="MTSTTGISIRGLTKTFGGKPVLDGIDLDIAAGERVVIIGPSGTG KSTLLRCLNYLDRPDAGLISIGDLTVDAAHARNSDILGLRRRTGFVFQNYALFANKTA IENIMEALITVQRLPKSEAAARAKAVLAETGLADKADSYPAALSGGQQQRVGIGRAMA LGAELMLFDEPTSALDPELVGEVLDLMRRVAEQRQTILIVTHEMQFAREIADRILFMH GGKIVEQGTPAQIFEAPQDVRLRRFLARIDG" gene complement(826297..827334) /locus_tag="RTM1035_04075" CDS complement(826297..827334) /locus_tag="RTM1035_04075" /note="COG2388 Predicted acetyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04075" /db_xref="CDD:32533" /translation="MVVGSCGNGHRASFALGPTTVTAFRAEFETLITDLGGTPSFNDT PNKVPYPVPFSEDHRDRPYDRDAVQRYHQALVAIDRVFHRFRTSFVGKSSPVHLFWGA LDLAVTRFSGRRAPLHPAGIPFLPDDVAQEAYDREMSAAGFWPGGNGIDYPAFYAYAY PSPTGYRSASVRPDAAFWHAGLSEFMLPYEAVQSAPDPEETLMAFLVSTYEAAANLGG WDRDLLECAHGRPRQVRAPNATQTIAVLATDGTVEREDGPSKGRYRLVVDGVEAEMSY SRVSASQIIIDHTEIPDALRGRKVGARLLQQAIEDARQDQVVIIPLCPFAKAMIGRHP EWQDVLSPSKT" gene complement(827742..829205) /locus_tag="RTM1035_04080" CDS complement(827742..829205) /locus_tag="RTM1035_04080" /note="COG0753 Catalase" /codon_start=1 /transl_table=11 /product="catalase hydroperoxidase hpii(iii) protein" /protein_id="jcventer:1101493006647_RTM1035_04080" /db_xref="CDD:29422" /translation="MTTQDSPTSRLTTTAGAPVADNQNSLTAGDRGPVLIQDWQLIEK LAHQNRERIPERVVHAKGWGAYGTLRITGDISHLTCAAVLQPGTVTPMIARFSTVAGE AGAADHERDVRGFALKFYTNEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTNLR SPTAMWDFWSLSPESLHQVTILFSDRGLPVSPMHMNGYGSHTYSLWNNEGTRVWVKFH FKTRQGHRHYTNSEAQDVVGRTREGYQEALFGAIEAGEFPQWTVEVQIMTQNEAEAFA FNPFDLTKVWPHAEFPPIKIGVLELDRNPDNYFAEVEQLAFSPSNVVRGIGHSPDRML QGRIFAYADAHRYRLGTHYEALPVNRPRCPVHHYHKDGAMRFFDAAANPDAYYEPNSL DGPQQDASFAEPTIDLQGPVGRFDHRDGNDDFIQPRALFQLFDQEQKDRLYANIATAM CGVPAAITERQIRLFHRVHPDFGAGVCAALDAMDPQF" gene 830287..831198 /locus_tag="RTM1035_04085" CDS 830287..831198 /locus_tag="RTM1035_04085" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulatory protein" /protein_id="jcventer:1101493006647_RTM1035_04085" /db_xref="CDD:47669" /translation="MTFHAHSSFAQWHSEGQHASYVRARKSSGGVLDLLEVARPAGDM SRPALPDIVLMEDMLGCSRVRGNLGGGRFDVRTGKGTLALAAPDFATTVINDESHRLR SLVFPLAQWQDVLDEAADGRFSLDTSFTYGLVLDSPSIRSALRNLWALCEDEGAPSRL LARAAGCEILAELCRLGGTPFAPARGGLAPWAERRCLELMHERFSEDISLDNLAAEAR LSPYHFARMFKQSVGVPPRVYMTRLRVEKACELLEHTDLPVTQIALEVGYSSNQVLAR VFVKLMRVSPSDYRRAVRDPVRSYTLR" gene complement(831314..831451) /locus_tag="RTM1035_04090" CDS complement(831314..831451) /locus_tag="RTM1035_04090" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04090" /translation="MHGLTRDWAEAPQIGVDIFRVEGGKLAEHREVLESKMPQLLAPP A" gene complement(831464..832096) /locus_tag="RTM1035_04095" CDS complement(831464..832096) /locus_tag="RTM1035_04095" /note="COG1280 Putative threonine efflux protein" /codon_start=1 /transl_table=11 /product="Lysine exporter protein (LYSE/YGGA)" /protein_id="jcventer:1101493006647_RTM1035_04095" /db_xref="CDD:31471" /translation="MDLSAYLTFVIVSAVQTATPGPSTLFIVNNAVAHGWRRALGALS GDLVAIALLATLSVVGLGALLQTYPAAFLTLRLAGAFYIIWLGLTFLRAAPPQPHPSA QRTIHEQSGLALWINSFGVGISNPKAVLFFAALFPQFLPAGSGTAVLALLVSTFVVVK FVILGGYAIGARQAVRLLSKPEHAKRGRMLTGIIFLAFGAIMIWSALTAT" gene complement(832627..833280) /locus_tag="RTM1035_04100" CDS complement(832627..833280) /locus_tag="RTM1035_04100" /note="COG1335 Amidases related to nicotinamidase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04100" /db_xref="CDD:29550" /translation="MTFRNGLDSLLRPEDSVLVLIDHQPYQLANLNSHDPQMVVNNTT ALAKCAKVFGVPTILTTVIAARGGDLFPHVSEVFPNQEVIDRTTINTWEDPKVVEAVK ATGRKQLVIAGLWTEICVAMPALQAAGEGWDVTVITDASGGTSVEAHEVAIQRMIAGG INMMTWLALASEWQRDWARAETAIALNDALRDHLGGSAIAYLWEQQLLNTEVPSVAA" gene 833982..834782 /locus_tag="RTM1035_04105" CDS 833982..834782 /locus_tag="RTM1035_04105" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04105" /db_xref="CDD:30941" /translation="MPNTLKTLTAAALAGSVAFGVNANPVPNIVLVHGAFADGSGWRG VYDELTARGYDVSIVQNPLTSFADDVSATQRVLNRQDGAVILVGHSYGGSVITEAGTD PKVVGLVYVAAFAPEVGQSTLDQYSEIPPPPNFVPEEQPDGFAYLNADHFHAGFAGDT DEADAAFLRDAQVPIAMAALAAPVTVAAWKTKPSWFVVATEDGAIAPDLLRSTARRIG AETTEVRGSHVVFLTQPKAVADVIDAAAKGAAEAVQGTDAGATAASTK" gene 835055..835375 /locus_tag="RTM1035_04110" CDS 835055..835375 /locus_tag="RTM1035_04110" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04110" /translation="MDRFALSHAGKRDMQVAGVAAKVDRQFEEIGRVVKVFRGMTVEA TKGVARRITSADKAARQATHGLQVPPARPGCEQCSTGRNKGRAAVEGLIGLGPRLCRS MRAS" gene complement(835418..836326) /locus_tag="RTM1035_04115" CDS complement(835418..836326) /locus_tag="RTM1035_04115" /note="COG0346 Lactoylglutathione lyase and related lyases" /codon_start=1 /transl_table=11 /product="Glyoxalase/bleomycin resistance protein/dioxygenase" /protein_id="jcventer:1101493006647_RTM1035_04115" /db_xref="CDD:30694" /translation="MTAIPGLHHVTAICSAPQTNLDFYTGTLGQRLVKKTVNFDDPGT YHLYYGDRAGTPGTIMTFFPFIGSGPGQAGHGMASAVAYASDAAGLDAWVDLLAQGDV NFDGPEERFGARVITLADPDRLSIEIAETADMAPGGFHSVTLRLADPEPTARLLTGIM GYEELGEETGPGLSRLRLRAPGGEMGSVIDLVRDDATTTARQGAGTIHHVAFRARNTE EQRNWQERLRAARLDVTPIIDRQYFKAIYFREPGGVLFEIATDPPGFAIDEPEEALGR NLMLPTRYEPDRARIERILPPLSGHM" gene complement(836323..837288) /locus_tag="RTM1035_04120" CDS complement(836323..837288) /locus_tag="RTM1035_04120" /note="COG1741 Pirin-related protein" /codon_start=1 /transl_table=11 /product="putative pirin" /protein_id="jcventer:1101493006647_RTM1035_04120" /db_xref="CDD:31927" /translation="MSWSPCPDPTLGDAESVDAIETVIVPRAVDLGEMTVRRALPSTA RQMVGPFIFFDQMGPAEFLTDQGIDVRPHPHINLATVTYLLEGEILHRDSLGTEQAIR PGAVNWMRAGRGIVHSERTAPELKRTGQRLFGLQTWMALPAAAEESDPAFIHHGEPDL PTIEDGALTLRLIAGALHGVRSPLATASETLYADIALAAGGTYRVEATHDERALYILT GPIAVDGKTHEPGTLLILAPRAEAVITAERDARLMLFGGEPMEGPRYIWWNFVSSRPE RIEQAKEEWRRGRFDTVPGDEAEFIPLPETNSPQQRATGREDHQT" gene complement(837525..838349) /locus_tag="RTM1035_04125" CDS complement(837525..838349) /locus_tag="RTM1035_04125" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="putative efflux system inner membrane protein" /protein_id="jcventer:1101493006647_RTM1035_04125" /db_xref="CDD:40616" /translation="MTRCLALLFAVTTAHMAVAEQLVFEGRIEASDRAVLSSRLNGVV AEILFEGGDHVKAGQPLIRLDPTDVALALEMTEARLAEAQARLDGAARRTARQEEMLD RGVAADATVGPARTERAMAEAAVALAEAERRRAALDLERAIIRAPITGLISPPAVAVG TFLEAEVAPPLATIITLDPAVVAYQAPYAERLASLEATGSRTVAELLETVRVKLRLPG DRIYPGEASPHAASPEVDAETGTVTVWARFPNPDALLRPGMAVMVLSEISQTEVAQ" gene complement(838346..838588) /locus_tag="RTM1035_04130" CDS complement(838346..838588) /locus_tag="RTM1035_04130" /note="COG4317 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04130" /db_xref="CDD:47119" /translation="MDWKPYAVSFAFGLAVGGLYALFGTRSPAPPIIALLGLLGMLLG ETAVSWLRDRTTAAGATAHCLHAKHFATSERQETEG" gene complement(838600..840795) /locus_tag="RTM1035_04135" CDS complement(838600..840795) /locus_tag="RTM1035_04135" /note="COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold" /codon_start=1 /transl_table=11 /product="Amidohydrolase 3" /protein_id="jcventer:1101493006647_RTM1035_04135" /db_xref="CDD:31762" /translation="MESVWHPWPPDRPPPPNSDLDAPGPAAALPRSRPIPCRRIERAC IAPQARPFFQAGVKSAAGTFDMHETRQHPIKTAAPVTRRWVTKSGAALGALGLFAPDT AQAQSNTEDGMADTIIRNARVTTLDPATPDVDAVAIRDGLILATGRENEIMWLADSDT HVIDAGGRRVIPGLNDSHTHLIRGGLNYNMELRWENVPSLADALRMLKEQADRTPAPQ WVRVVGGWSEFQFAERRMPTLDEINTAAPDTPVFILHLYGQALINRAAIAVLGFGKET PNPPGGEIQRDAQGNPTGLLIAKPSALILYSTLAMGPKLPLEEQINSTRHYMREMNRL GITSVIDAGGGGQNYPDDYAVIQQLHDADQLTVRIAFNLFAQTAGAELSDYENWVAMT EPGAGSNMLRMNGAGENLTWSAADFENFLEPRPDLVPTMESELEPIVELLAVNKWPFR IHATYDETIDRFLTVFERVNQRQPFETRFIIDHAETITPRNIERITALGGGIATQHRM AFQGEYFVDRYGAEAAQATPPIRRMIDMGTPVGAGTDATRVASYDPWVSLYWMTTGKT LGGMPLYSEDNLLSREEALRLWTHGSAWFSGEANEKGTLAPGMYADLAVLSADYLSVP PDEIRQINAVLTMVGGRIVHGEGPFSDLAPPLPPASPGWSPVGAVPSPGARQATGATE MRIDRACHDGCASACSLHGHDHGIAWTNPIPVKDVKSFWGALGCSCFAV" gene complement(840743..841372) /locus_tag="RTM1035_04140" CDS complement(840743..841372) /locus_tag="RTM1035_04140" /note="COG1335 Amidases related to nicotinamidase" /codon_start=1 /transl_table=11 /product="hydrolase, isochorismatase family protein" /protein_id="jcventer:1101493006647_RTM1035_04140" /db_xref="CDD:29550" /translation="MAFGVQSIDRQVLKNNVVALAKAAKVFDIPTTITTVETESFSGH TYPELLAVFPDHPLLERTSMNSWDDQKVRNALAKNGQKKVIVSGLWTEVCNNSFAFSA MAEGGYEIFMVADASGGTSQEAHDYSMQRMIQAGVVPVTWQQVMLEWQRDWAHRETYD AVMSLVREHSGAYGMGVDYAYTMVHKAPERVEHGERLAPVAAGSAAAAE" gene complement(841514..841588) /locus_tag="RTM1035_04145" CDS complement(841514..841588) /locus_tag="RTM1035_04145" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04145" /translation="MAAVGVCWLAGFDVEITVMARIPG" gene complement(841705..842541) /locus_tag="RTM1035_04150" CDS complement(841705..842541) /locus_tag="RTM1035_04150" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="non-heme haloperoxidase" /protein_id="jcventer:1101493006647_RTM1035_04150" /db_xref="CDD:30941" /translation="MAEITTPDGNRIFYKDWGPRDAQPIVFHHGWPLSSDDWDAQMLF FLSKGYRVVAHDRRGHGRSEQVDSGHDIDHYAADAFAVVEALDLRNAVHIGHSTGGGE VARYVARHGGPAGRVAKAVLVAAIPPLMLQTETNPEGTPMEVFDGFRAALAGNRAQFF RDVPAGPFYGFNREGATVHEGVIQNWWRQGMMGSAKAHYDGIKAFSETDQTEDLKAMT VPTLVLHGEDDQVVPIAASAEKAVKLLPNGTLKTYPGFSHGMLTVNADVLNADLLAFI TG" gene complement(843318..843491) /locus_tag="RTM1035_04155" CDS complement(843318..843491) /locus_tag="RTM1035_04155" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04155" /translation="MMVVERVLITDVIGRPVRQISLDPAALAARFVAQGLPPDYAKTL TGLGVVRRALKTV" gene complement(843488..843925) /locus_tag="RTM1035_04160" CDS complement(843488..843925) /locus_tag="RTM1035_04160" /note="COG3631 Ketosteroid isomerase-related protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04160" /db_xref="CDD:33430" /translation="MADKFDSFSDLLRAALGDRLAPADSLLGLFTDDVIFEFPYAPDG LPKRLDGKAALAAHLEKLGPLLIFGPMELGSVHAAGDTVVFEFSCSGAGVNTGAPYNQ KYISVVTVREGRIAHYRDYWNPLVVLTALGGTEAAAAAYEGTA" gene 844036..844605 /locus_tag="RTM1035_04165" CDS 844036..844605 /locus_tag="RTM1035_04165" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator, TetR family protein" /protein_id="jcventer:1101493006647_RTM1035_04165" /translation="MQRADLTDALYRAFFEEWAERGFAAISLERVAARAGAGKAAIYR RFSSHHEFAVAAVSTIGLTIAMPDDHGSLEADVLAFLIRLRVVLRHPMIRRILPDLHA EAARSAPMRDLNTQVAKARREQAQVVLDRAITRGELDQAVDRDLALDLLPAPLYWRMV VLGITPTRDQLATEAVAIVAALRASSPRC" gene complement(844784..845086) /locus_tag="RTM1035_04170" CDS complement(844784..845086) /locus_tag="RTM1035_04170" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04170" /translation="MEKSAMLTAVLLAIGAEFARSETPHPYVGMWVTADNRIRHELLP NGRYVEARGERERAYEGRYEINGTYIEYWDDSGFTADGEFVEPDVLHHAGMVLYRK" gene complement(845095..845817) /locus_tag="RTM1035_04175" CDS complement(845095..845817) /locus_tag="RTM1035_04175" /note="COG4221 Short-chain alcohol dehydrogenase of unknown specificity" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="jcventer:1101493006647_RTM1035_04175" /db_xref="CDD:33946" /translation="MDKVILITGASSGIGEGIARTLAAQGAKILMGARRTDRLDAIAQ DLRGHGAEVATWSLDVTELRSMQEFAQTALNLWGRIDVLVNNAGVMPLSPMSAVKFDE WERMVDVNIKGVLWGIGAVLPVMERQGEGQIINIGSIGALQAVPTAAVYCGTKFAVRA ISDGLRQESSAIRVTCVNPGVVESELASTITHEETQALIGDYRAIALQPVDIARAVSQ LINAPATVDTTEITIRPTASAN" gene 845932..846816 /locus_tag="RTM1035_04180" CDS 845932..846816 /locus_tag="RTM1035_04180" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="putative LysR-family transcriptional regulator" /protein_id="jcventer:1101493006647_RTM1035_04180" /db_xref="CDD:30928" /translation="MDLNLLPLLLAVAEEQNFRAAADRLGVTRSAVSQGIRRLEDALG IQVVMRTTRSVRLTEAGARLVESLRAPMAAVQDALEANEDVPSGRLRLAVTSIAEEFL SGPLLARFAEAHPKVTVDVTVIDDALDIVAGGYDAGVRLGEVIEQDMIAVPVGGPQRE VAAATPAYIARYGAPNHPKDLLDHRCVGWRPAPDTAPWRWEFEENGKPFDVMVDPQVT TNDLRLMLRVALADGGITFAPWDCMREHFDSGALVPLLTGYLPPFSGFYLYFPQRQNM APKLRALINHIRQWRFVD" gene complement(846925..847845) /locus_tag="RTM1035_04185" CDS complement(846925..847845) /locus_tag="RTM1035_04185" /note="COG2367 Beta-lactamase class A" /codon_start=1 /transl_table=11 /product="beta-lactamase precursor" /protein_id="jcventer:1101493006647_RTM1035_04185" /db_xref="CDD:32514" /translation="MPCAIDSDKDELMLTHAVTLPLLAAGVSLALLTGGPAFGQNPKL HLAATIDRIEQELDARVGVVIRDSGSDWTVSHRAEERFLMASTFKTMLCGAVLHRVDE GDLDLEERIAIEAAEVLEYAPVTEKMVGETMSVGELCHAALDMSDNTATNLLIDRIEG PQSVTAFLREIGDPVSRLDRREPDVNTFAPDDPRDTTTPEAMVSTMETLLTGGALSPQ SRAQLVDWMTDGGVTGALIRASTPAGWHVADRSGSGNFNRNIVAMVTPPDREPYFIAI FLSDADADFNTRNGAVIELSKAVMQVVTSR" gene 847996..848892 /locus_tag="RTM1035_04190" CDS 847996..848892 /locus_tag="RTM1035_04190" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006647_RTM1035_04190" /db_xref="CDD:30928" /translation="MPMDRPDLPLNGLRVFEAAYRQGSFTRAAIELRVTQAAVSHQVA RLEDRLGVTLFVRASGGLVPTDEGRALYPVLEHGFDAMARTLDRITGHRHIETLKIGV VTTFAVGWLWPRLPEFRQEHPSIDLRISTNNNRVEILREGLDMAIRYGSGSWTGLESD VLLEAPLAPLCAPSMAEYLTTPESLSREVLLRSYRSDEWPRWFAEAGALCPPLTGPIF DSSLAMAEIASDGGGVALLPVEMFTNRIADGRLVQPFSTMVSASRYCLTWPADRPPTP AMRDFRSWLLTASAEPALGTSA" gene 849329..849769 /locus_tag="RTM1035_04195" CDS 849329..849769 /locus_tag="RTM1035_04195" /codon_start=1 /transl_table=11 /product="Transcriptional Regulator, TetR family protein" /protein_id="jcventer:1101493006647_RTM1035_04195" /translation="MLKVSELRFAALLGQWPKTESIDQFLARSMTAFISDDAFVRDSI AAVRILAILHREPALRSAWLMACHAAEMELIGVVADRAARTADDFEVRLCAAAITAAM RLVDEEISAAVINAGMHVTSEEATARILSAIRAAATLPICDAVA" gene 849884..852088 /locus_tag="RTM1035_04200" CDS 849884..852088 /locus_tag="RTM1035_04200" /note="COG1505 Serine proteases of the peptidase family S9A" /codon_start=1 /transl_table=11 /product="Prolyl oligopeptidase" /protein_id="jcventer:1101493006647_RTM1035_04200" /db_xref="CDD:31694" /translation="MSKRQGRLSVTQHLLGAAATALLLSNAPAFAEDDMPMTYPDTRQ TDTEELHFGVTVADPFRWLENDPRQDDEVAQWIAAQNAVSTPYLEGLSGRDVFHRRLT AMFDHETLTPPVERGGLYFFTRNGGLDNQAQLLVREGADGANRILIDPNTWSEDGTVA LAEWAASPDGTFVAFAMQDSGSDWRTIRVINTSTGEILDDTVEWARFTTIAWHPNGSG FYYSRFPEPEAGAAFSAGVEGHAVYFHRLGSHQSEDQLIHAATAGQALLHSVDVTPDG RYLIVYTSALTGGVAVTVTDLSSADPAPDTIIESYDDRWLLLGNVGTKLFFATQKDAP RGRIVTMDLSEAQPGFSEMIPERPDAVLREGGSAMLGDRLLLSYTIDVQSQAELYNLD GTFEGTVPLPGPGSTGIVRGRPGANEAFFAFTSFDAPLTVLRLDVDANRTTVWAEPEI ATDLDTITVEPHFYTSQDGTRVPLFVVRRKDIDGPAPTMLNAYGGFAISMVPHFSPAA MAWVEQGGVYAVANIRGGGEYGQAWHHAGRRANKQNVFDDFIAAGEYLINQGITPADG LAIHGESNGGLLIGAVVNQRPDLFAAALPGVGVLDMLRFDRFTSGATWVEEFGSPAVE EEFQTLLSYSPLHTIREGARYPAILVTTADTDNRVVPAHSFKYTATLQAADIGNRPHL LRVETRAGHGTGKPTNMVIAEFSDMWAFAAHWTGLEVSPGCRCNHLPSSTKY" gene 852104..852523 /locus_tag="RTM1035_04205" CDS 852104..852523 /locus_tag="RTM1035_04205" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="acetyltransferase, GNAT family protein" /protein_id="jcventer:1101493006647_RTM1035_04205" /db_xref="CDD:40669" /translation="MTEIRPAEGSEGEARDRILALLDLHSKAIGKSFKSETVLFEAHE DGRYLGGLAARFSLDLKWVFVELLAVTEESRGKGVGGQLMARIEQEARLRRMDGIWLD TFSFQAPEFYKRLGYSEFGRIDGYPMNEARLFFVKRL" gene 852780..853721 /locus_tag="RTM1035_04210" CDS 852780..853721 /locus_tag="RTM1035_04210" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04210" /db_xref="CDD:42493" /translation="MRRKRESWFLEPDEMVRTPRVPADLEYHRVYADEKRKIVRGIVA IILLFAGLVLFAQVCLAVASAIDTQLLGRTGFTPLMHAAGALSLALLIPYSMLLQRWL YGIPARSLHSVAGRFRFGVFGRALIVFGPLLLIVMSVGFLLTPGDTVPWSTADLVAFF IIGMTLTPLAAAGEEYGLRGLMFRVVGSWTRESLSGAMLGIGVTTVLFSLFHGTLAPY ILGSYLVLFGAMATITWRTGGLEVAVVLHAVYNVSALVLATTLHLDLGGDLSSRGEIA GTPANLVPSAGLVVITAIVWWTTRKSGPARTPANSSA" gene complement(853867..854802) /locus_tag="RTM1035_04215" CDS complement(853867..854802) /locus_tag="RTM1035_04215" /note="COG1073 Hydrolases of the alpha/beta superfamily" /codon_start=1 /transl_table=11 /product="Alpha/beta hydrolase" /protein_id="jcventer:1101493006647_RTM1035_04215" /db_xref="CDD:32448" /translation="MPIEEELTASGPTGPLRGTLTLPTEHGPLPADVPVFLVVPGSGP TDRDGNSPLGIAAAPYRLLAEALAERGYPSVRIDKRGMFGSEGAISDPNDVTIASYGD DLLAWTAAIRKRLPTQDGTRCVIPIGHSEGGLVALAAMARIPDACGVILIASIGRALD EVIGEQLRANPANAPFLQEAEAAMATLKRGNRVDTGTMSPALRPLFGAEVQGFLIDAM SYDPIELAARVEVPMLVLQGTRDLQVSVTDARMLADAKADATLALLPDVNHVLKTVAS EDASANLATYTNAAIPIAPSVVDAVADFVQGIRQD" gene 854813..854944 /locus_tag="RTM1035_04220" CDS 854813..854944 /locus_tag="RTM1035_04220" /EC_number="3.4.11.18" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase" /protein_id="jcventer:1101493006647_RTM1035_04220" /translation="MSKSLPVWALAGDVIANPSDTANSRAMMTGEGCMGMMLHEFSE" gene complement(854991..855938) /locus_tag="RTM1035_04225" CDS complement(854991..855938) /locus_tag="RTM1035_04225" /note="COG0024 Methionine aminopeptidase" /codon_start=1 /transl_table=11 /product="methionine aminopeptidase protein" /protein_id="jcventer:1101493006647_RTM1035_04225" /db_xref="CDD:29971" /translation="MRIIYETHTDCDDPSIGRRRQEDSPTKKGHRVATYINVPVAPPA QSARRTERIKLYGPDAFAGMRRAGALTARCLDEIAALVRDGTPLSEINTFVLDFAATH DARPATLGYKGYEYACCTSVNHVVCHGAPTARKLRADDIVNVDVTLVLDGWYGDASRM YAVGKPKIAAERLIRIAHEAMMRGIRAVRPGARLGDIGHAIQSYAASQRCSVVRDFCG HGIGQVFHDSPNILNVGKRNTGPELREGMIFTVEPMINLGRPDVKMLADDWTAVTRDR SLSAQFEHSIGVTAEGFEIFTLSHQGLHMPGVDLAAAQT" gene 855962..856168 /locus_tag="RTM1035_04230" CDS 855962..856168 /locus_tag="RTM1035_04230" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04230" /translation="MGIVKIAEELHEELRKSSTVMCRSINAQAEFWMKVGMLAEANPG LSYIEIMAQQRKLADVKMPEINAA" gene complement(856273..856743) /locus_tag="RTM1035_04235" CDS complement(856273..856743) /locus_tag="RTM1035_04235" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04235" /db_xref="CDD:33923" /translation="MERQAPAVAGRLNQDRITGASHCFSGHTLALLLDAQLQGQDFSE PWIGAGILLTALGRGGDDLTPESAARFSFFDVDYTSIRSPILVACGAEDHPHVTPRGP EWHADAFTDAPGANALLMIAGVGHGLGGIAGLDAKETEAEAPDAHDATRRLTYA" gene complement(857598..858443) /locus_tag="RTM1035_04240" CDS complement(857598..858443) /locus_tag="RTM1035_04240" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006647_RTM1035_04240" /db_xref="CDD:30928" /translation="MPDLDIALLRSFVTVSRSGSMRAAALRIGRTQSAVSLQIKRLED LVGEELFHRTGSGVTLTVAGERFFPGAERVLAAHDETLGSIRQDGLCGSIVFGCPEDY LTAFFPDLLRRYGAAHPGIEIEVISAPTVELRPLLQRRRIDLAIVSLPDTADPSDIIR YEPLVWIASTDAPALLQEPILPLALSAPDSLDHIEARRAMDAGSRPYRVAHASNGLAG LLAIARSGLAVSVATRAAVPSDLSIITNGLPPLPKLGISLAYASARPSPASRSFGRFV ALNLT" gene 858598..859854 /locus_tag="RTM1035_04245" CDS 858598..859854 /locus_tag="RTM1035_04245" /note="COG0160 4-aminobutyrate aminotransferase and related aminotransferases" /codon_start=1 /transl_table=11 /product="aminotransferase, class III" /protein_id="jcventer:1101493006647_RTM1035_04245" /db_xref="CDD:30509" /translation="MRYGPVFERRIIDRAEGCFVYDTDGKPILDFTSGQMSAVLGHSH PEVVRVIREQAGRLDHLFSGMLSQPVVALCSRLGRMVPGLEKTLLLSTGGEANEAAIR LAKCVTGKHEIVAFTKSWHGMTGAAASATYSAARKGYGPVTVGSFAIPAPHAYRPRFT HDDGSLDWQTELDDAFALIDAQSTGSLAAFIAEPILSSGGIIELPEGYLAALKRKCEE REMLLILDEAQTGVGRTGTMFAFERDGVVPDILTLSKTLGAGLPLSAVMTSREIEEKA HERGYIFLTTHVSDPLPAAVGLAVLDVLERDGLISRATQAGALLRDGLLALQQRHDCI GDVRGRGLLLGLEIVTDRNSRVPDLEMGDRIAEAAMERGLSMNIVKVPAMGAVFRIAP PLTATDAEITHGLDILGEALEVAVRR" gene complement(860245..861198) /locus_tag="RTM1035_04250" CDS complement(860245..861198) /locus_tag="RTM1035_04250" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006647_RTM1035_04250" /db_xref="CDD:47669" /translation="MDTLSGIVALLQPHDCVAAGFDAAGDWSIQFERHVGLKCNSVIK GGCWITVDGGKPVWLDAGDCVILPHGLPFIMSARSVSHGTDANEIYAPVAHGGTASYG GGGEFFMAGSRFLLSGPAAEMLLPSLPPILVVKGGEKGEVLAWALNRIARELRAPEPG SALTIAHLSHLILVQALRVFLAQDHSGVTGWLAALSDLNISRAVAAIHAEPSRSWTVA GLAAEAGLSRTIFAERFRQITGRTPLGYLTQWRMLLAMDRLLASNAALARIASDVGYS SESAFAAAFKRETGHSPRRYAREARNGTSRSALRRYCASND" gene 861298..862179 /locus_tag="RTM1035_04255" CDS 861298..862179 /locus_tag="RTM1035_04255" /note="COG0702 Predicted nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04255" /db_xref="CDD:31046" /translation="MILITTPTGDIGARVLSNVLGAGEKVRVILRDASKLDADTRGRV DIVEGSHADGGAIARALDGVSAVFWLPPGSVRAKTPEDAYVDFSRAFCTALPGSSVSH IVGVSALGRGWPKPAGLAAASIAMDDMIAATGVAYRSLACASLMDNIARQIGPIREQG AFYQPTPGDLKLPHVAKADVAAIASRLLIGQDWDSAAELALCGPEDLSFEEMARVLSD VLGREIAFHEMSVKDFGGMMRGMGASEGMAQGYVEMMTAKNEGMDNAACPKDRSATPT TFRTWCETELLPSIQAQ" gene complement(862289..863605) /locus_tag="RTM1035_04260" CDS complement(862289..863605) /locus_tag="RTM1035_04260" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="two component sensor kinase" /protein_id="jcventer:1101493006647_RTM1035_04260" /db_xref="CDD:30987" /translation="MTRSPSLKRPLIVYPLVFHFLTLLVSFAILIAVALRVDSGGPYT DEQIIPIIAQAVERDATGGLTVVMTPDLADLRGKAPDLWFVAEDDGGASVVFGRVPEH YASLLGRLSDLSYAQMRDRVAPHDLAAVIRRENTDIGTLTILGHGPLSELGFMVVFAT NTIILPIFILLTLTSLVVTPWIVRRSLAGVSRIAREAEGINADSRGRRLSEAYVPQEI APLVRAVNDALRRLDDGYERQQRFIASASHELRTPIAVLASKVDAADSTAVRALALDV QRLATMTEQLLDLHRLENNRQDEAIDPAEVGRRLVGDMAPLVIANGGSISLDVLGNEP CIGDAAALERVLMNLVQNAIDHGGTNVVVRVLGTAFEVEDDGPGIPPTERERVFEPFH RLRPRTTGSGLGLNLVREVMDQHGGRVEIRDAPGGGTVFRIDLGTV" gene complement(863602..864276) /locus_tag="RTM1035_04265" CDS complement(863602..864276) /locus_tag="RTM1035_04265" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="jcventer:1101493006647_RTM1035_04265" /db_xref="CDD:31088" /translation="MRILLVEDEPRLAESLRKVLERERFIVDHASGVESAREASKLGT FDLVLLDRSLPDGEGLSLLPSLRADNPGIHVIVLSARNGVNDRVAGLDGGADDYLTKP FSIDEMLARIRAVFRRPAKLAHATIRAGSLVFDLAYEEVEVDGARIDLPRRELRVLAA LIKRRGRTVQREALENAVFGFDDEIQSNTLDSHISRLRRRLTTAGARIEIHAIRGVGY LLREAP" gene complement(864493..864900) /locus_tag="RTM1035_04270" CDS complement(864493..864900) /locus_tag="RTM1035_04270" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04270" /translation="MTKTTHDTLAELRLGTPAPFIAAAFSLPALLAVQFLLAGQALFA GLPWDLHGAFGGVIAIPVFTLLWCSLIVRRLRGFGWWAGVIGLLYALQLALASFGSGA LALHPFNAALLLTASLIVLFKVERRRSARAIRD" gene complement(864904..865542) /locus_tag="RTM1035_04275" CDS complement(864904..865542) /locus_tag="RTM1035_04275" /note="COG2249 Putative NADPH-quinone reductase (modulator of drug activity B)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04275" /db_xref="CDD:32430" /translation="MEEFFTLNHLRIIPKPKEAPMTQTLILLFHPDLGRSKANAALQA AARTVSGAQVVDMSARYPSGVIDMHADGEAEARALLEADRIVLQFPIQWYSTPPLLKA WQDAVLTRMYYIHAATEGDRLAGTPLMIAATAGNAPAAYGRDGANHFTMDELMAPLKA TALRCGLPWHSPHLVFRADKLKSAELAAAQESYVRALKDFIATPTILDQRAA" gene 865574..866479 /locus_tag="RTM1035_04280" CDS 865574..866479 /locus_tag="RTM1035_04280" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="putative LysR-type regulator" /protein_id="jcventer:1101493006647_RTM1035_04280" /db_xref="CDD:30928" /translation="MNLRGIDLNLLVVLDALLDEAHVSRAAHRLNMSQPAVSSALQRC RDLFGDPLLERGRGGMTRTVLAQTLRAPLRSILSEVDALIDRGEVPLDRIERVVRITA ADDPATLLACPLIEDISRTAPGVTIVFKPWQGQEAVTREILDGATDIAIAVLDREIEN IEIRKLIDVDYVVAMRRDHPAAAGFTIDAWLAWPHVVVSGQGDLRTPLDAQLAASGRR RRVGLTVPSFQLVPRVLAETNLIAMLPRQSVATKVEFDLVFHQPPVSVDGFPLHIAWH ARQNRDTAVQHVVEVIRAVFRETGV" gene complement(866565..867485) /locus_tag="RTM1035_04285" CDS complement(866565..867485) /locus_tag="RTM1035_04285" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006647_RTM1035_04285" /db_xref="CDD:30928" /translation="METLSNLEAFVRSAECGSFSGAARILALTPAAVSRSVAMLERNL GVRLFHRSTRGLRLTEAGESFLASVGEPLDRLQGAISAVTAQGPTPAGTLKLSMPPSF GLAHVLPLLPGFLAQYPLIRAEWHFENRVVDLVTEGYDAAIGGAIERAPGTVARRLAP LHVVAVASPAYMAGRRGPTDPAGLAEFDGIAMRVLRTGRIRHLIMRNRAGQEMEAALN ETVVVNEPSAIREAAKLGLGIALLAVAEVLSDLEDGRLIRLLPDWYADDGGISVYYAS RSFLPAKTRAFIDWIDAAFKEQRLPERFNG" gene 867841..868677 /locus_tag="RTM1035_04290" CDS 867841..868677 /locus_tag="RTM1035_04290" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="non-heme haloperoxidase" /protein_id="jcventer:1101493006647_RTM1035_04290" /db_xref="CDD:30941" /translation="MGYITTDDHVQIFYKDWGPRDAQPIVFHHGWPLSSDDWDAQMLF FLSKGYRVVAHDRRGHGRSEQVDSGHDIDHYAADAFALAEALDLRNAVHIGHSTGGGE VARYVARHGGPAGRVAKAVLVAAIPPLMLQTDANPEGTPMEVFDGFRAALAGNRAQFF RDVPAGPFYGFNREGATVHEGVIQNWWRQGMMGSAKAHYDGIKAFSETDQTEDLKAMT VPTLVLHGEDDQVVPIAASAEKAVKLLPNGTLKTYPAFSHGMLTVNADVLNADLLAFI TG" gene 868762..869160 /locus_tag="RTM1035_04295" CDS 868762..869160 /locus_tag="RTM1035_04295" /note="COG0251 Putative translation initiation inhibitor, yjgF family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04295" /db_xref="CDD:30600" /translation="MSNRNSIFPENRHALYEAHGYSAAVRSGDHLFVSGQVGSLPDGS PEPNFAKQVNLAFRNLDAVLTAAGASFDDIIDVTTFHTDPDTQFDAIMPVKNRYFPAA PHPTWTAVGVNWLAGFDFEIKVIARIPGQA" gene 869246..870163 /locus_tag="RTM1035_04300" CDS 869246..870163 /locus_tag="RTM1035_04300" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04300" /db_xref="CDD:30941" /translation="MTTTPAQIRYRSRQIGDVDVFYREAGPADAPVILLLHGFPTASH MFRDLMPLLADRYRLIAPDLPGFGQTKAPPRGTFTYTFDRLADVIGGFTEALSLDRYA LYIFDYGAPVGLRLAMRHPERVSAIISQNGNAYTDGFSDQWGPWEAYWRDGSDANREA CRPSLSPDTIRNWQYGTGADPERLAPDGYELDIAYMARPDAEEIQLDLIRDYRTNVAL YPDFHTYFRQHRPPLLATWGRHDPAFIPAGARAYRRDLPDAEVHLLDAGHFALETHAA EIAALIREFLGRVLSVGNQDTDALSMSGN" gene 870497..871387 /locus_tag="RTM1035_04305" CDS 870497..871387 /locus_tag="RTM1035_04305" /note="COG0042 tRNA-dihydrouridine synthase" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase A" /protein_id="jcventer:1101493006647_RTM1035_04305" /db_xref="CDD:30391" /translation="MVTAPALVRGGAVYLLEHSPEEYPVALQLGGSDPAELAQAARMG AQAGYAEINLNCGCPSDRVQSGRFGAILMTEPALVAACCVAMREAQPVEVTVKCRIGV DDQNPEEVLPEFLAHVVAAGVQRVQIHARKAWLDGLSPKENRDIPPLDYDLVQRMKML FPNLHISINGGITSLDQAVSLLDQGLDGVMVGRAAYHQPADILCAADRRIFGTSGPDT TPEGAVHAMLPYIEAHLASGGRLNQITRHMLGLFAGKPGARAWRRHLSEGASRPGAGP ELVERALAEITDLTESPVIL" gene complement(871362..872276) /locus_tag="RTM1035_04310" CDS complement(871362..872276) /locus_tag="RTM1035_04310" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="chromosome replication initiation inhibitor protein" /protein_id="jcventer:1101493006647_RTM1035_04310" /db_xref="CDD:30928" /translation="MSLPPDHLVTLSAILQTGSFEGAAQALGLTQSAISQRLKVLETR VGAQLVHRTTPCTATPAGQRLAAHADQIALLEARLREDLTGLAPAPQTRLRLAVNADS LATWLPQALASLPDHLFDLVIDDQDVSHDRLLRGEVLGALTTRASPLPGCDVVALGLL RYQAVASPDFIARHFADGITPGRLGVAPMLQFNSHDQLQHRWITQATGVTLSPPCHRL PSSEGFVTAARLGMGWGMAPEALLSDDLARGTLHLLRADCPLDTPLYWQWSRLLGTAL APVTRALRRGARRSLRMPQDLTKSRETL" gene 872395..872988 /locus_tag="RTM1035_04315" CDS 872395..872988 /locus_tag="RTM1035_04315" /note="COG1279 Lysine efflux permease" /codon_start=1 /transl_table=11 /product="Lysine exporter protein (LYSE/YGGA)" /protein_id="jcventer:1101493006647_RTM1035_04315" /db_xref="CDD:31470" /translation="MQAGLAGFALGLSLIMAIGAQNAFVLRQGLRRAHVLAVVLVCAI SDAILVTAGVTGFGVLAEAVPGLERIMRFGGAAFLLAYGARSFLAAWRGAAALEAGEG AGSLRRAVLTCLALTWLNPHVYLDTVVLLGSISTQYENRFVFGLGAVCASFVFFFSLG YGARLLAPLFRRPASWRVLDAGVGCVMWAIAFGLLRG" gene 873084..874004 /locus_tag="RTM1035_04320" CDS 873084..874004 /locus_tag="RTM1035_04320" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04320" /db_xref="CDD:34611" /translation="MSAQEASRAESTARPGWGIFWMVVTGILFVGVTALVKVLGTRVP APQAAFLRYAMGLVFLLPMLGSLWRLRLARGTWGFFAARGVVHTVGVALWFYAMARIP IADVTAMNYLAPIYVTLGAGLFLGERLALRRVLAVGVALIGALIILRPGFREVGPGHL AMIFAAIFFGASYLIAKVVSGRSSPGVVVAMLSITVTLGLAPLAAAVWVTPTPWELAI LFAVATLATAGHYTMTLAFRAAPLAVTQPVTFLQLVWAVLLGALVFGEGVDVFVVLGG MVIVGAVSFISWREAVLKRRITPTVSATKV" gene complement(874017..875045) /locus_tag="RTM1035_04325" CDS complement(874017..875045) /locus_tag="RTM1035_04325" /note="COG4175 ABC-type proline/glycine betaine transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC glycine betaine/L-proline tranporter, ATPase subunit, ProV" /protein_id="jcventer:1101493006647_RTM1035_04325" /db_xref="CDD:33915" /translation="MTDTIVNFNKVSIVFGDAPETALPLMDQGMTRPEIQQKTSQVLG VHDCDLAVAPGEILVLMGLSGSGKSTLLRAVNGLNPVVRGTVEIHDGSGMVDVTNATP ATLRRLRQHHIAMVFQQFGLLPWRSVRENVGLGLELAGMPKPERAARVDRQLALVNLS DWAERRVGELSGGMQQRVGLARAFATDAPILLMDEPFSALDPLIRNHLQDELIDLQKT LGRTIIFVSHDLDEAFKLGDRIAIMEGGRIVQCGTPQDIFTNPATDYVAEFVAHMNPL GVLCARDVMEPASGTPDTCVGPNASIQDVMESAQGHDRPVGVIENGQLLGQITRNRIL AKLLDPRA" gene complement(875042..875878) /locus_tag="RTM1035_04330" CDS complement(875042..875878) /locus_tag="RTM1035_04330" /note="COG4176 ABC-type proline/glycine betaine transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC glycine betaine/L-proline transporter, inner membrane subunit" /protein_id="jcventer:1101493006647_RTM1035_04330" /db_xref="CDD:33916" /translation="MDWLSDHKIPVGKWAEGFFLWLQDNAAGFFDMLSVLMEGLIDAF LWVLQTPHPMVIIGVFVALTWVLQRSWKTCLFVLLGFLFILNQGYWEETTESLTLVIS SCVFCMALGVPLGIAAAHRPRLYDGMRPVLDLMQTLPPFVYLIPAIVFFGIGMVPGLI ATVIFVVPAPIRLTHLGISNTPQPLLEAAQAFGATNRQTLWKVELPYALPQIMAGLNQ TIMLSLSMVVIGALVGADGLGVPVLRAINTVNIALGFESGLMIVVVAIVLDRMLRMEG RK" gene complement(875878..876603) /locus_tag="RTM1035_04335" CDS complement(875878..876603) /locus_tag="RTM1035_04335" /note="COG0322 Nuclease subunit of the excinuclease complex" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04335" /db_xref="CDD:41586" /translation="MALRDDILALIKDQPGITDAEIKRRIPGTGLRHQQVNARCRLLA EEGLIRRIKPSRGAIGNYPEASLEKPEGSPRPRVGEKPPPGGAVGGCPAEPPGATIQA VAPTCINIEFFWQSVGEIQFLDESLHFPHLPARAGLYRIRLPVSRSVYVGETVNLRRR MQNYRRPGATQTTSVWVNDHLRNRLRDGELVLLETCTDAMTTTGTIRQGADLKSKIVR VMIEHAAILYEKQANWIPLNKAN" gene complement(876606..877535) /locus_tag="RTM1035_04340" CDS complement(876606..877535) /locus_tag="RTM1035_04340" /note="COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="Substrate-binding region of ABC-type glycine betaine transport system" /protein_id="jcventer:1101493006647_RTM1035_04340" /db_xref="CDD:32296" /translation="MSFKTTLTAIALATAATGPAMANCDSVTFADVGWTDITATTAAT SLVLEALGYETEAKVLSVPVTYTSLAKGDIDVFLGNWMPTMEADIAPYREAGTVDTVR ANLVGAKYTLATNAAGAALGINSFETIAQHADAIESTIYGIEPGNDGNRLILDMIEAD AFGLKGFEVKESSEQGMLAQVSRADRREEPIVFLGWEPHPMNANHELTYLTGGDDWFG PDLGGATIYTNTRAGYVAECPNVGKLLENLEFSLAMENEIMGAILNDGAKPEDAASSW LKANPDAIGPWLDGVTTKDGGDAMAAVKAALGL" gene complement(877639..879192) /locus_tag="RTM1035_04345" CDS complement(877639..879192) /locus_tag="RTM1035_04345" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="Twin-arginine translocation pathway signal" /protein_id="jcventer:1101493006647_RTM1035_04345" /db_xref="CDD:31090" /translation="MTILNSGRINRRGFMATTAGAALIAGLPLRAKAAPSRGGHLRAA IGHGQTTDTLDPGTWSNSFTTSLGFAIHGRLTEVAADGSLIPEVAESWEASADASVWR FKLRSGVAFHSGKSLTAADVVNSINFHRGENSTSAAGPLVAPVTDITTEGDDIVVFTL DGGNADFPYFLSDYHLVICKAEGESIDWKSGDGCGSYVLKDFNPGVSYALERNPNHWR SDVAWFDTAEVLAIVDQNARTTALVSGDVDVVDRLDLKTVGLLARNPNIQINSVAGTQ HFTFAMDTRAEPYNNPDVRLALKYGINRQELVDKILFGYGSIGNDHPIGRGQRFFNTE LEQKSFDPDKAKFHLKQAGLDSLEVKLSAADAAFGGAVDAAVLYQSSAAQAGITLTPV REANDGYWSDVWMKKPFSAVYWSGRPVEDQMFATAYKCGAAWNDTFWCNDRFDELMLK ARSELDEDKRREMYFEMQAICSDDGGQIVPMFANYVFGNSNNIAHSDTLGANWDVDGM RFIERWWMA" gene 879462..880034 /locus_tag="RTM1035_04350" CDS 879462..880034 /locus_tag="RTM1035_04350" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, BetI" /protein_id="jcventer:1101493006647_RTM1035_04350" /db_xref="CDD:40531" /translation="MEPIRRTALVEATISEIGAHGSLDVTVAQIARRAGMSSALAHHY FGSKEQMFVAAMRHILTLYGAEVRGALIMAKSPRERIEAIIRASFTPAQFRGEMVSAW LNFYVQAQRSDEARRLLHIYQRRLRSNLHHAFRALAPDEARTLTRGLAAMIDGLYIRQ ALREGPMQPGLAIDVLLHYLDTSLPQKDKE" gene 880031..880801 /locus_tag="RTM1035_04355" CDS 880031..880801 /locus_tag="RTM1035_04355" /note="COG3119 Arylsulfatase A and related enzymes" /codon_start=1 /transl_table=11 /product="choline sulfatase" /protein_id="jcventer:1101493006647_RTM1035_04355" /db_xref="CDD:32933" /translation="MTAPNILIFMVDQLNGTLFPDGPAPWLHAPNLKALAARSTRFAN AYTASPLCAPGRASFMSGLLPSRSRVYDNAAEFAADIPTFAHHLRRAGYQTCLSGKMH FVGPDQLHGFEERLTTDIYPADFGWTPDYRKPGERIDWWYHNMGSVTGAGVAEISNQM EYDDEVAHNARAKVYDLARGLDARPWCLTVSFTHPHDPYVARKKYWDLYEDCDHLLPD VPAMDYADHDAHARRIFDANDWRNFDISQEDIRRSRRA" gene 880853..881539 /locus_tag="RTM1035_04360" CDS 880853..881539 /locus_tag="RTM1035_04360" /note="COG3119 Arylsulfatase A and related enzymes" /codon_start=1 /transl_table=11 /product="choline sulfatase" /protein_id="jcventer:1101493006647_RTM1035_04360" /db_xref="CDD:32933" /translation="MESTRQEAIILFVSDHGDMLGERGLWFKMCFYEGSARVPLMISA PGMAPGLITDPVSNIDVCPTLCELAGADMSEVAPWTEGQSLVYLGQGGRREAPVAMEY AAEASQAPLVSLRYGKWKYNRCALDPDQLFDLEADPHELTNLADDPAHAGTLAQLQAK AEARWDLAAFDAAVRESQARRWVVYEALRKGGYYPWDYQPLQKASERYMRNHMDLNVL EESKRFPRGE" gene 881613..883271 /locus_tag="RTM1035_04365" CDS 881613..883271 /locus_tag="RTM1035_04365" /EC_number="1.1.99.1" /note="COG2303 Choline dehydrogenase and related flavoproteins" /codon_start=1 /transl_table=11 /product="choline dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_04365" /db_xref="CDD:32458" /translation="MQADYVIVGAGSAGCAMAYRLAEAGKSVLVIEHGGTDAGPFIQM PGALSYPMNMKRYDWGYLSEPEPHLGNRRLVCPRGKVIGGSSSINGMVYVRGHARDYD HWRDQGCDGWGYADVLPYFKRMENWHDGGHGGDAGWRGHDGPLHVSRGRRDNPLVRAF VEAGKQAGYPETHDYNGHQQEGFGPFEMTVWKGQRWSAANAYLKPALKRDNCDIIRGF VSRVVIEEGRAVGVEVLIKGRKEVVRAHAEVILAASSINSPKILMLSGIGPAAHLSEH GIPVVADRAGVGQNLQDHLELYIQMAASQPVSLYKYWNLFGKAWVGARWLLNKSGPGA SNQFESCGFIRSGAGVDYPDIQYHFLPIAVRYDGKAAAEGHGFQAHVGPMRSPSRGAV TLRSADPADDPVIRFNYMSEAQDWEDFRKCIRLTREIFAQDAFAPYVSHEIQPGAAVE SDDALDDFIREHAESAYHPCGTCKMGRASDPMAVVDPAGRVIRVEGLRVADSSLFPRI TNGNLNAPSIMVGEKIADAVLGRSPLPPENAEPWMHPDWAQSQR" gene 883335..884015 /locus_tag="RTM1035_04370" CDS 883335..884015 /locus_tag="RTM1035_04370" /note="COG1525 Micrococcal nuclease (thermonuclease) homologs" /codon_start=1 /transl_table=11 /product="nuclease (SNase-like) protein" /protein_id="jcventer:1101493006647_RTM1035_04370" /db_xref="CDD:31714" /translation="MLRICLLIVLGLVPLSAGAEGFGGLVRVIDGDTLDVGEVRVRLH GIDAPELGQICTNPDGATWDCGTWVAEEVRARIENREARCQAVEKDRYDRTVARCTVV GQDVGRMLVADGLALAYRKYSMAYDLDEKAAVIAGRGLHEVLMARPEDHRRMVREERA AEAQANAPAPQAGCVIKGNRSGSGNQIYHMPGQADYDATVITEAKGERWFCSEAEARA AGWRRAKR" gene complement(884088..884786) /locus_tag="RTM1035_04375" CDS complement(884088..884786) /locus_tag="RTM1035_04375" /note="COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family protein" /protein_id="jcventer:1101493006647_RTM1035_04375" /db_xref="CDD:32402" /translation="MTMHITWLGHSSFRIEIGGQVLLLDPWLNGNPMLPEDQHGPATE GATHILLTHAHFDHVADVLPLAKRLGVPVVGQYDLMSHWEAKENIATVGFNKGGTIDL GGVQITMVHATHSTSIATDAGPQVTGSECGYMIAGEGHVIYVSGDTDVMADMGVFNAL HAPDIGILCAGGHFTMDMRRAAYAAKTFFEFKTVIPCHYRTFPILEQSAETLIAALPG VDVIEPQVMQPITL" gene 884924..885211 /locus_tag="RTM1035_04380" CDS 884924..885211 /locus_tag="RTM1035_04380" /note="COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA(Gln) amidotransferase, C subunit" /protein_id="jcventer:1101493006647_RTM1035_04380" /db_xref="CDD:31065" /translation="MSIDLETAAKVAKLARIAVPQEALPALANEFNTILGFIEQLNEV DVTGVEPMTSVTPMRLKRREDVVSDGNQQAAVLSNAPDAREGFFAVPKVVE" gene 885211..886698 /locus_tag="RTM1035_04385" CDS 885211..886698 /locus_tag="RTM1035_04385" /EC_number="6.3.5.-" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA amidotransferase subunit A" /protein_id="jcventer:1101493006647_RTM1035_04385" /db_xref="CDD:41475" /translation="MTDLNRMTIAEARDALRKGDVTSLELTEACLAAVDGAGALNAFV HHTPEVARAQAQAADTRIAKGDAPAMCGIPLGIKDLFCTKGVPSQAASRILQGFKPEY ESTVTQNLFDAGAVMLGKLNMDEFAMGSSNETSCYGNAVNPWRRGNDETALTPGGSSG GSASAVAADLCLGATGTDTGGSIRQPAAFTGITGIKPTYGRCSRWGIVAFASSLDQAG PMTKTVRDSAIMLGAMCGHDPKDSTSADLPVPDFEALLTGDIRGKVIGIPREYRMDGM PAEIEKLWSDGAEMLRAAGAEIRDISLPHTKYALPAYYVIAPAEASSNLARYDGVRYG HRAKLAQGDGITEMYEKTRAEGFGHEVQRRVMVGTYVLSAGFYDAYYNRARRVRALIK RDFDEAFAAGVDAILTPATPSAAFGLGEMTDADPVQMYLNDVFTVTVNLAGLPGVAVP TGLDGKGLPLGLQLIGRPWEEGDLLNTAYALEQAAGFVAKPAKWW" gene 886727..887464 /locus_tag="RTM1035_04390" CDS 886727..887464 /locus_tag="RTM1035_04390" /note="COG0248 Exopolyphosphatase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04390" /translation="MKEMRFTLGLVALMALVACAPAVPDSGAGVGFQNYDTYQRDKAA REAALARGVLPPPDAVSSEPLSATGQTTAGADDAATIAAEARAALDAAAANSGVAPLQ ASPSNPPPAVENAAGISQENNFDAVGAERSIAEDAARIANNRAQYQVVQPEAIGSRPS DVGPNIVDFALSTKHAVGTPVYRRLSINSGSKFERNCAQYPSADQAQLDFLRRGGPER DRQGLDPDGDGYACNWDPRPFRNAVRG" gene 887403..888155 /locus_tag="RTM1035_04395" CDS 887403..888155 /locus_tag="RTM1035_04395" /note="COG3023 Negative regulator of beta-lactamase expression" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase, family 2" /protein_id="jcventer:1101493006647_RTM1035_04395" /db_xref="CDD:32839" /translation="MAMAMPATGTRARSATRCAADARVIWHPSPNIGLRRGGVCPDMI VLHYTAMVTAEVALERLCDPSAEVSAHYLICERGRLWHLVAEGARAWHAGAGQWGDVT DVNSRSIGIELANTGLHPFPEPQMRALEGLMVGIMARWSIPPARVIAHSDMAPARKCD PGPRFDWRRLARQGLSIWPAQGSEAAPEQFPHDAARFGYVRSEGVSEADILRAFRLRF RPHVTGPLDPQDCAMMADLAARFAVDRAAPSA" gene 888617..889123 /locus_tag="RTM1035_04400" CDS 888617..889123 /locus_tag="RTM1035_04400" /note="COG5488 Integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04400" /db_xref="CDD:35047" /translation="MPYEWTAPRTEADTDRTLSLWPHRSLPRRGFAAFVLATFTLITV PLYPLLGTAVLWGLLPFLLMAVAGMWWALEHSYRTARLTEVLTIAPEEVHLVRTNPRG DVQEWACNRYWAQVNMHDTGGPVAHYITLKGSGREVEIGAFLSEEERMALYGELADAL RPPGTVVG" gene 889248..890027 /locus_tag="RTM1035_04405" CDS 889248..890027 /locus_tag="RTM1035_04405" /note="COG2961 Protein involved in catabolism of external DNA" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04405" /db_xref="CDD:32781" /translation="MLSYQHHYHAGNPADVHKHAALAWVLDYLCQKPKPLSYIETHAG RGLYDLGDAAALKTGEAAQGVARLEARFAADHPYRRCLTQNRAAHGASAYPGSPLIAA QSLRRVDRLHLAELHPGENTHLRRNLAGFDVQIRQQDGFEMAQELCPPTPRRGLLLVD PSYEVKTEYESIPRHLTQIARKWNVGILMLWYPILTSGAHEGMLIHLGAAFPEGLRHE VAFPPVRAGHRMVGSGLFVVNAPYGLEAELARITEVFAAKG" gene 890097..891500 /locus_tag="RTM1035_04410" CDS 890097..891500 /locus_tag="RTM1035_04410" /note="COG1357 Uncharacterized low-complexity proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04410" /db_xref="CDD:31548" /translation="MPQGTDLAKVAGRVGKGARMDQTDLTITLPLSAQQGQIILLALG IAVASVIVWVATETETRKPSPLALLKAFGWAMVPIWLLLFGGTLWQVWQMLSGGHTAF AGRQSLGAGALVAALLGAPFVVWGTVLKQRTVDFQQEGHITDRINKAVEQLGAEKTEK VYTMGDDNKPIQAERTVPAIEVRIGAILSLERIAQDSTRYDKGRDHVRVMEILCAYVR ENSNARAPRDFPLPKWKSLKHDATDEERKLHIEARKDRFDDGPFRTPKARKWAKDLPK PRADIAQALLVLGRRTTDQRRVEAAWPNPPEEGIVWPFDLACPELPEVKDDAPQTVPE IDRFSEKLSAWRERLRTYSGYRLDLRGANLQGADLSAKRPDASDAVFSGALLNDVRME GANLSWARMEGANISASRMEGGCLSGVRMDGANLALSQLEGAEITGAHMVGVVLDWSR LEGADLRQVRMAGANLS" gene 891504..891680 /locus_tag="RTM1035_04415" CDS 891504..891680 /locus_tag="RTM1035_04415" /note="COG1357 Uncharacterized low-complexity proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04415" /db_xref="CDD:31548" /translation="MMEFADFRDARMEGAKLVGSRMEGADFRKARIVGADLRWALMEG TDLGGVPLDINVII" gene 892216..893889 /locus_tag="RTM1035_04420" CDS 892216..893889 /locus_tag="RTM1035_04420" /note="COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, aa3-type, subunit I" /protein_id="jcventer:1101493006647_RTM1035_04420" /db_xref="CDD:29934" /translation="MADAAIHGHEHEDQRGFFTRWFMSTNHKDIGILYLIVSAFVGLI SVTFTVYMRMELMEPGVQYMCMEGARFIASDVAECTPNGHLWNVMITYHGVLMMFFVV IPALFGGFGNYFMPLQIGAPDMAFPRMNNLSFWLYVAGTSLGVASLLAPGGNGQLGSG VGWVLYPPLSTNEAGMSMDLAIFAVHVSGASSILGAINMITTFLNMRAPGMTLFKVPL FSWSIFVTAWLILLSLPVLAGAITMLLTDRNFGTTFFDPSGGGDPILYQHILWFFGHP EVYIIILPGFGIISHVIATFSRKPIFGYLPMVWALIAIGVLGFVVWAHHMYTVGMSLT QQSYFMLATMVIAVPTGVKVFSWIATMWGGSIEFRTPMLWAFGFLFLFTVGGVTGIVL SQAAVDRAYHDTYYVVAHFHYVMSLGAVFAIFAGIYFYFPKMTGRMIPEWGGKLHFWA MFIGANLTFFPQHFLGRQGMPRRYIDYPEAFALWNWWSSIGAFLSFASFVFFFGLVIY ALFRGARETRPNPWNEYADTLEWTLPSPPPEHTFEQLPKREDWDKQPAH" gene 893940..894050 /locus_tag="RTM1035_04425" CDS 893940..894050 /locus_tag="RTM1035_04425" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04425" /translation="MAAAQPCGVRHCPSIAADARPRDWRAITKVIAGDHL" gene 894123..894533 /locus_tag="RTM1035_04430" CDS 894123..894533 /locus_tag="RTM1035_04430" /codon_start=1 /transl_table=11 /product="twin-arginine translocation pathway signal sequence domain protein, putative" /protein_id="jcventer:1101493006647_RTM1035_04430" /translation="MLITRRHFAGLTLAAAATALGAAPSFAASDIRKGTLSGRQGYTV SGTVKIKKKDGKTVVHLADDYLFDPSKNPPDIKIGFGNGEQYAKGSKIHDKLTVKKGA ASFEVPAGINTDDFQELYIYCEQFSVILGVAPLK" gene 894657..895043 /locus_tag="RTM1035_04435" CDS 894657..895043 /locus_tag="RTM1035_04435" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04435" /translation="MYAQDSFFDLSTGGQIGLVGLSGFLFILFVLAARVLLRHRGIWT RLLGALVLFWLFIWLSPQLYYEYYRLLIPSLPAQWVIWPPRNPSEGIVLLVLQGPQSL AAHGQAVLGWCLLAAPFLRGSTKRRR" gene complement(895044..895976) /locus_tag="RTM1035_04440" CDS complement(895044..895976) /locus_tag="RTM1035_04440" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006647_RTM1035_04440" /db_xref="CDD:30928" /translation="MAQDITLRQLRYFIALTETGHYRKAAERVGVSQPSLSQQILGLE TALGMTLVERGHRGAILTPGGREVLTHARKMIEEAEVLGSLAQSTREGMAGTIRLGAS PTLGPYFLPYVVRRLRRTYPGLKLIIRDAAPTVLQEELLEGRHDLILAQLPLNSGDIA VERLFREPLKLAVAQDHPLAGQASAQDADLAGQDILALPRGYPMHMQIVTLCEEVGAQ LRQEYEGTSLDALRQMTALNMGICFLPALYVQSEVSPETGDVAILSFRQDRFLRSVGV AWRRRSAHGPMVERIVRVIREVARDRFAALVRLE" gene 896158..896343 /locus_tag="RTM1035_04445" CDS 896158..896343 /locus_tag="RTM1035_04445" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04445" /db_xref="CDD:44238" /translation="MATLRRRHQNIDALITTEHQRPMPDMAVLKRLKQERLGLKDAIH VTRLMLARCTPDTVRTG" gene 896801..897730 /locus_tag="RTM1035_04450" CDS 896801..897730 /locus_tag="RTM1035_04450" /codon_start=1 /transl_table=11 /product="dihydroneopterin aldolase, putative" /protein_id="jcventer:1101493006647_RTM1035_04450" /db_xref="CDD:31728" /translation="MTHEIRLAFEHPSARARATSPDGPLDRISVRDHVVEVEIGAFQA ERGTTQRICFNVVVEVRPLTDAIEDDVDRILSYDKVTEAIAAELAEERLNLLETLAER IAERILWEPQAVRTFVRIEKLDRGPGALGVEIVRSVNDLKTKPITPHAATTPHPHVVF LTNTAIRSPNLSRWLDQLEARAEPVILCVGRADEVPPQTGHRMTQRRVDLLAMEQNAW VLAGRDERCVVVATRTELDWSMKHGQISVWAPSKIVLDAVDGPGVATDDPVALAAWFA GYIEASDLLMIGETPPKSCRVPVLFQDVAQSGL" gene complement(897741..898424) /locus_tag="RTM1035_04455" CDS complement(897741..898424) /locus_tag="RTM1035_04455" /note="COG1136 ABC-type antimicrobial peptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="lipoprotein releasing system ATP-binding protein" /protein_id="jcventer:1101493006647_RTM1035_04455" /db_xref="CDD:48288" /translation="MSEAMLRLSGVEKIYNRGQTSEVRVLNGVDLTLARGEMVALVAP SGAGKSTLLHIAGLLDTPDAGRVEIGGEDMTGLTDRRRTMVRRQEVGFVYQFHHLLPE FSALENIVLPQLANGVARRDAVARAQTLLEQVGVGARAGHRPSAMSGGEQQRVAFCRA LANGPRVLLADEPTGNLDPGTSDQVFAALTGLVRGTGLSALIATHNLDLAARMDRILR LDQGQVVPG" gene 897898..898143 /locus_tag="RTM1035_04460" CDS 897898..898143 /locus_tag="RTM1035_04460" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04460" /translation="MPVGSSAKSTRGPLASARQKATRCCSPPDMAEGRCPARAPTPTC SNSVCARATASRRATPLASCGSTMFSSALNSGRRWWN" gene complement(898417..899703) /locus_tag="RTM1035_04465" CDS complement(898417..899703) /locus_tag="RTM1035_04465" /note="COG4591 ABC-type transport system, involved in lipoprotein release, permease component" /codon_start=1 /transl_table=11 /product="lipoprotein releasing system transmembrane protein LolE" /protein_id="jcventer:1101493006647_RTM1035_04465" /db_xref="CDD:34229" /translation="MARTPAPFAAFEWLIAWRYLRAKRAEGGVSVMTWISLIGITLAV FALIATLAVRSGFRAEFVDTILGANAHVTVYNSGAVDATGRVDRSLEDYAAMADRVRA VPGVTRVAPLVKGQVMANARDRNAGVQVYGITAQDLATIPRVADPETGVGDIARFDQG IAIGSGVAQELGVTVGDRIKLISPNGVKTPLGTSPRVNAYEVVYIFTAGRYDIDRVRA YLPFAEAQSFFNRDGRADELEVMVAEPERVYDLTVPLLEAAGERALLWTWQDASGSFL RALEVEDNVMFVILSILVLIAAMNITSGLIMLVKNKGRDIGILRTMGLTEGSILRVFF ICGAFTGMIGTAMGVILGCLFALYIDPIFSFVNMAMGGQVWDPSIRGIYRLPAQLRSE DVLSAVMLSLGLSFVVTIFPARRAARMNPVEALRYE" gene complement(899970..901325) /locus_tag="RTM1035_04470" CDS complement(899970..901325) /locus_tag="RTM1035_04470" /EC_number="6.1.1.15" /note="COG0442 Prolyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="prolyl-tRNA synthetase" /protein_id="jcventer:1101493006647_RTM1035_04470" /db_xref="CDD:30791" /translation="MRLSRYFLPVLKETPAEAQIASHRLMLRAGMIKQASAGIYSWLP LGFKILRKLENIVHEEQVRAGHIPVLMPTLQSADLWRESGRYDDYGAEMLRIKDRHDR DMLYGPTNEELITDIFRAHVGSYKDLPLTLYHIQWKFRDEVRPRFGVMRGREFLMKDG YNFDLTKEDALHAYNRHMVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGE SEVFYDSAITDLRLGGRVVDYASRAECEAIVTEWTTPYARTDETHDAALYEAIPEARR RASRGIEVGQIFYFGTKYSEPMGANVQGPDGKSVPVHMGSHGIGVSRLIGAIIEANHD DKGIIWPEGVTPFHAGIVNLKQGDAEADAACEALYASLVALGMEPLYDDRDERAGGKF ATMDLIGLPWRITVGPRGLKNGVVELTSRRTGISEELPPEQAVEKLAQIYAGHVLRPS L" gene complement(901407..902570) /locus_tag="RTM1035_04475" CDS complement(901407..902570) /locus_tag="RTM1035_04475" /EC_number="3.5.1.16" /note="COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /codon_start=1 /transl_table=11 /product="acetylornithine deacetylase" /protein_id="jcventer:1101493006647_RTM1035_04475" /db_xref="CDD:30969" /translation="MAARLTPVEIMERLVGFPTVSRDSNLPLVEWVEEYLASHGIESH RHYDETGEKAAIFAHVGPWVAGGVVLSGHTDVVPVDGQPWASDPFAVVERDGKYYGRG CCDMKGFDALAIWALVEAHHSGVARPLQLALSYDEEVGCLGAPPMIERMLEVLPRAEL AIIGEPSMMQAVTGHKGGIGYDVHVVGYEVHSSLMHTGVNAIMAAAPLIDWANARNAE NRAQPATELAALFDPPWTTLHVGQISGGTAHNITAKDCCFGMDMRMVPGEDAEDWGAR FEAEVRAAEAAMQAVRPEARIDLRPRFRVPGLQPEEAGAAEGLVRQITGDNGRHVVSY GTEAGQFQEAGYSAVICGPGDIAQAHQPDEYITVAQFEAGHAFMRALLGRLAG" gene complement(902573..904393) /locus_tag="RTM1035_04480" CDS complement(902573..904393) /locus_tag="RTM1035_04480" /note="COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase" /codon_start=1 /transl_table=11 /product="peptide/nickel/opine uptake family ABC transporter, ATP-binding protein, putative" /protein_id="jcventer:1101493006647_RTM1035_04480" /db_xref="CDD:31320" /translation="MLDTPIVQIENLRVAFETRDGPVVGVEDVSFAVNPGETVCIVGE SGSGKSVSSLSLMRLIEYGGGTIAGGRILFDRKEGGTVDLAKTDQSLMRTIRGNEIGM IFQEPMTALNPVFTVGRQLSEGLRVHRGLDKAAARAQALELLREVRIPEPERRLQQYP HELSGGMRQRVVIAMALACKPRLLIADEPTTALDVTIQAEILALIDRLKRETGTAVIF ITHDMAVVAQMADRVVVMFRGTKVEEGPVAQIFEAPSHDYTKALLAAVPKLGEMRGKV WPEPMRLLGSDAQEIKPIKGHDKELLRVKGLTTRFPVKGGFFRRTLANVHAVEDLSFT LQKGRTLSLVGESGCGKSTAGRSILRLVEPMAGEVVLDGVDIMALAPRDLRRARVDMQ MVFQDPFASLNPQMKLAAQVAEPMKNYGLVSASEIEDRVAMLFDRVELPRSFLRRFPH ELSGGQRQRVAIARALALNPKLIVADEAVSALDVSVQAQVLNLMMELQADLGLSYVFI SHDMAVVERVSHDVGVMYLGRIVERGPRAAVFENPQHPYTQALMKAVPIADPKLRKSE KDLNFKPIPSPIHRVGYDPGPSVYKEVDPGHFVLTSESGY" gene 904669..906369 /locus_tag="RTM1035_04485" CDS 904669..906369 /locus_tag="RTM1035_04485" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006647_RTM1035_04485" /db_xref="CDD:31090" /translation="MTLKSLLLGATAATSLASVAMAERGADGHVNLIYWQAPSIMNPY LSGGTKEVEAASLVIEPLGRYNTKGEMIPYLAEEIPTVANGGVSEDLTSITWKIKPGI TWSDGTPFTANDVKFTAEYCMHPEGGCAQLGKYEGVSSVEVIDDLTVKVNFSQPTPVP YGPFMGGQAPIIQAAQFADCLGAKAQECADANFAPIGTGPFKVDEFRPNDVISLSANP NYRDPAKPRFATMTFKGGGDATAAGRAVLETGEFDYAWNLQLAPDVIANMEAAGKGVA MSAFGTLVERIEMNMTDPSPDLPEGERATAKHPHPILTDLRVRKALSMAIDRALLTEI GYGKAGRPTCNLVPAPEIFASDNTDCLTQDIEGAKALLEEAGWTVGAGGIREKDGKKL SLLFQTSTNAVRQDFQALIKQWWSEIGVETELRNISASVFFGSDPGSPDTFPKFYADV EMYANNFDGTDPQSYLAGYTCEKAPRPETQWQGENINRFCDPAYDALVKELGRTAELD KRGEIAKKLNDMLTKDSYTIVPLVDRGRVSARSNSLGGVELNTWDTELWNAADWFRIK " gene 906459..907466 /locus_tag="RTM1035_04490" CDS 906459..907466 /locus_tag="RTM1035_04490" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="jcventer:1101493006647_RTM1035_04490" /db_xref="CDD:30946" /translation="MLTYTIRRLVLAIPTLLFISLVIFLLLELAPGDPMAQVPLTVPP DVKEKMRLALGLGEPTHIRFVKWMWQFFVVEPMMLVDWLFGTSMAEGQQRVLSWQFRS PVMDVIVQRMPQTLWVVAMSYVVGILIALPIGIYSAYRQYSVFDQTGTFITMVGYSVP PFFSGVLVIVIFSVQLGWLPSIYDTTLVVVDWATFKQQLMQMVMPVMVLALQTTAQIS RFMRASMLDNLGQDYVRTARAKGLSEWAVVMVHVLRNSMIPVITVIALGVPSIFGGAI ITEQIFKVNGLGQLLITAIEANDLPMVQTVTFMIAVLIVFFNIVADVLYGVLDPRIRY D" gene 907459..908391 /locus_tag="RTM1035_04495" CDS 907459..908391 /locus_tag="RTM1035_04495" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="peptide/nickel/opine uptake family ABC transporter, permease protein" /protein_id="jcventer:1101493006647_RTM1035_04495" /db_xref="CDD:31366" /translation="MTEPQTPIAALKDTGPTAPPRSQWRDVWDQFKSHRGALIGGIVL LVIIAAVFLGPLVWPYDATFIDIRARNQGPSWTHPFGTDQLGRDTLARMMAGGQTSIA VGLTAMLLALVLGSLVGVLAGFFRRLDGPLMRLTDLFLSLPLLPLLLVMVLLFREALN GVFGPERGIFILIVVAIGVTSWMPTARIVRGDVLALKEREFILAARSIGTTNFGLITR HILPNVMSPIMVSATLGIANAIITESALSFLGLGFPPDFPTWGRLLNDATQYLQDYPE RVFWPGLGISLTVLSINYMGDGLRDALDPRIRGR" gene complement(908663..909820) /locus_tag="RTM1035_04500" CDS complement(908663..909820) /locus_tag="RTM1035_04500" /note="COG1559 Predicted periplasmic solute-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04500" /db_xref="CDD:42585" /translation="MWRHIVSNFLTLLVVAVFLLGGVILWGQQQYSARGPLSDAICLR VEPGSTMRRVSSRLESDGAVTSGAIFRIGAEYSEKDALLKAGSWLIPEAASMAEITDI ITRGGASTCGTEVVYRLGVTSAEVVVRELDAATGRYEERAKFDPAAEGEVPAEFTQVR EQADTRYRVALAEGVTSWQVVEGLKSVDVLTGEVAEVPAEGTLAPDSYEVRAGDTRES VLTRMSEAQAVILAAAWQGRAEGLPLQSAQEALILASIIEKETGVADERRQVASVFVN RLNRGMRLQTDPTVIYGVTEGKGVLGRGLRQSELRGATPWNTYVIEGLPPTPIANPGR ASIEAAVDPDTTDYVFFVADGTGGHAFAETLDEHNRNVARWRAIEAERGNN" gene complement(909820..911079) /locus_tag="RTM1035_04505" CDS complement(909820..911079) /locus_tag="RTM1035_04505" /EC_number="2.3.1.41" /note="COG0304 3-oxoacyl-(acyl-carrier-protein) synthase" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl carrier protein) synthase" /protein_id="jcventer:1101493006647_RTM1035_04505" /db_xref="CDD:29421" /translation="MRRVVVTGLGLVTPLADGVELTWSRLLAGQSGAGTIIRFDPVNV VTKYACQIPLGDGTDGTFHSDKYMEPKERRKVDDFILYGIAAAQQAVEDSGWMPEDEA ARERTGVMLGSGIGGLRSIEETAGIIREKGVRRVSPFFIPGALINLISGQVSIRYGFK GPNHSVVTACATGAHAIGDAARLIQWGDADVMVAGGAEASICEIGIAGFNACKALSTK RADDPQAASRPYDADRDGFVMGEGAGVVVLEEYEHAKARGAKIYAEILGYGLSGDAYH ITAPSETGDGGFRAMQAALQRAGLNPSDIDYVNAHGTSTMADTIELQAVERLLGNAAA NVTMSSTKSSVGHLLGAAGAVEAIFCILAIRDQVAPPTINLDNPSVETPLDLAPNAKR ERKIDVALSNSFGFGGTNAALIVGKPR" gene 911284..912261 /locus_tag="RTM1035_04510" CDS 911284..912261 /locus_tag="RTM1035_04510" /note="COG2055 Malate/L-lactate dehydrogenases" /codon_start=1 /transl_table=11 /product="Malate/L-lactate dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_04510" /db_xref="CDD:42582" /translation="MADITLHEIETRTTAALIRHGAAPWIAAEVARAVRAAESIGNRI CGLYYLESYCQQLQTGRVNGTVEPEVSQPRPGAVLVDARMGFAQPAFARGIDRAAAAA RINGVASLAIGHAHTCTSLGYFTEQIARRGLIGLGMTNASPIVAAPGGKTRVIGTNPI AFSVPDGQGGLAMQFDQSTTVVALGKITMAKAAGQPIPLGWALDAQGNPTTDPEAALS GSLVSIGGAKGWGLGLMAELLAAGLTGGVVSRDVNPLKAPDGPPHDLGQYYLLMDPDL SGVFFDRLAQVAEGATTDAGARMPGQGKKPCDPVTVPDPLWAQVRDLAG" gene 912339..912743 /locus_tag="RTM1035_04515" CDS 912339..912743 /locus_tag="RTM1035_04515" /note="COG2010 Cytochrome c, mono- and diheme variants" /codon_start=1 /transl_table=11 /product="cytochrome c family protein" /protein_id="jcventer:1101493006647_RTM1035_04515" /db_xref="CDD:32690" /translation="MRAKLSIVILASLTLTNATQAQDIRAGTQTYERYCAACHGHDAT GFGPMRAVLTLLPTDLTALKATNNGHFPVERVVRRIDGRDPLVSHGSPMPIYGSFFED RDTGLKTERGQIILTSQPVIDLVAYLETLQKP" gene 912797..913195 /locus_tag="RTM1035_04520" CDS 912797..913195 /locus_tag="RTM1035_04520" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04520" /translation="MRSIILSLILMLGLAVPLRAQEGAQAVITAQIEAFLAQDVSRAY GYASPFIQQKFATPEQFGAMVRDGYPMVWRPSDVTFLEMREIAGRLWQGVRVVDAAGA GWIVDYEMIETPEGWRINGVQVRPAPDASV" gene 913276..914286 /locus_tag="RTM1035_04525" CDS 913276..914286 /locus_tag="RTM1035_04525" /note="COG0294 Dihydropteroate synthase and related enzymes" /codon_start=1 /transl_table=11 /product="Dihydropteroate synthase, DHPS" /protein_id="jcventer:1101493006647_RTM1035_04525" /db_xref="CDD:29545" /translation="MPYYRPIPRTDPARPAGALTLAGGWCWFDTVEVLDRAALSYLMP AADLPIEALHRLTTPRAPVAGLDMTAPQIMGILNVTPDSFSDGGQHFDPEVALAHARQ MASDGAAILDVGGESTRPGAAPVPVEDEITRTAPIISALRAGLTTPISIDTRKAAVAQ AAHAVGANLINDVAGLTYDPALAPYAATHALPVCVMHAQGSPETMQQDPRYDHVLLDV YDWLAARIEALEALGIPRARIITDPGIGFGKTVAHNLTLLQNLSLFHSLGCPVLLGAS RKRFIGEISRTPVAADRIPGSLAVALGGVAQGVQILRVHDVPETRAALDLWRATLAAP RA" gene complement(914420..915337) /locus_tag="RTM1035_04530" CDS complement(914420..915337) /locus_tag="RTM1035_04530" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04530" /db_xref="CDD:40969" /translation="MQEISALNWLRIGALGVIWGASFMFVSVALTGAGPFFVAAVRIV LGAGFLLCLLRFKGRKLPALRGPDGARIWQFALVMALFSNVLPFILLSWAQQSVASGF AGVCMAAVPLLILPLAHFLVPGERMHVRRLVGFVLGTTGVVVLIGPEAFTSTGKDLES LARLACLGAAGGYAIGSIATRLSPEVDRLSLSALVLTLAAGMIVPLALVVEGLPTDLN TKSLLALLYLGILPTGVAQLLLVQVNREAGPSFFSLVNYMVPVWSVILGALVLSEVLP PSLLAAMTLILVGVGMSQWGALRRVFGAR" gene complement(915405..916427) /locus_tag="RTM1035_04535" CDS complement(915405..916427) /locus_tag="RTM1035_04535" /EC_number="1.1.1.86" /note="COG0059 Ketol-acid reductoisomerase" /codon_start=1 /transl_table=11 /product="ketol-acid reductoisomerase" /protein_id="jcventer:1101493006647_RTM1035_04535" /db_xref="CDD:30408" /translation="MRVYYDRDCDINLIKDKKVAILGYGSQGHAHALNLRDSGAKNLV VALREGSKSAKKAEAEGLKVMGIAEAAAWCDLMMFTMPDELQGETYRKYVHDNIRPGA AIAFAHGLNIHFGLIEPKESVDVIMMAPKGPGHTVRGEYVKGGGVPCLVAVNNDASGK ALEIGLSYCSAIGGGRSGIIETNFREECETDLFGEQAVLCGGLVELIRMGFETLVEAG YAPEMAYFECLHEVKLIVDLIYEGGIANMNYSISNTAEYGEYVSGPRVLPYEQTKKEM KAILRDIQTGKFVRDFMQENAVGQPFFKGTRRMNDAHQIEEVGQKLRAMMPWISAGKL VDQSKN" gene 916543..917010 /locus_tag="RTM1035_04540" CDS 916543..917010 /locus_tag="RTM1035_04540" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family protein" /protein_id="jcventer:1101493006647_RTM1035_04540" /db_xref="CDD:31711" /translation="MEETMLDDTDRRILRHYQHAPTLGASDLAERAGVTSATCARRLE RMQQEGVIRANRAVIDWRALGYEVEVSLRITLDKTQPRAFDEFIDAARNVPEVIEIQT FLGRVDLRLSVIARDMAHYQQLYRSAILTLPHIADIEALMHVARIKSDEVLPL" gene 917007..917465 /locus_tag="RTM1035_04545" CDS 917007..917465 /locus_tag="RTM1035_04545" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family protein" /protein_id="jcventer:1101493006647_RTM1035_04545" /db_xref="CDD:31711" /translation="MIELDTLDRLILREMVRDATQSASAIGRALGLSQPATWRRLQRL RDTGVIKGQRLELDHEKLGFGVSVFLGVKLATKGRVSLEDFERAVSAIPEVQTVEHIL GLYDYRLRVVARDISDFERVLRRRIMTLPGVGDVEANVLLSEERRPGPIG" gene 917530..918657 /locus_tag="RTM1035_04550" CDS 917530..918657 /locus_tag="RTM1035_04550" /note="COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase" /codon_start=1 /transl_table=11 /product="aminotransferase, class V" /protein_id="jcventer:1101493006647_RTM1035_04550" /db_xref="CDD:30424" /translation="MTALLDHVDPDGLLEYSVVFTDRSLNHMSASFQEVMCDISSMLK DVYAADAVALVPGGGSYAMESVARQFGRGAHALVVRNGWFSFRWSQIFDAGQFTSDTT VCMARQTGNGATTPFAPAPIEEVVAKIHEAKPDVVFAPHVETSAGLILPDDYITALAN AAHEVGALLVLDCIASGCAWVDMRATGVDVLISAPQKGWSASPSAGLVMLSARALERL EETTSDSFALDLKKWRAIMQAYENGGHAYHATMPTDALRGFRDTMIETRDYGFERLRD AQWDLGNGVRAMLAARGVTSVAAEGFGAPGVVVSYTSDPDIQNGKKFMAEGMQIAAGV PLQVGEPEGFRTFRLGLFGLDKLYDVPAALKRLETVLDKVL" gene complement(918661..919863) /locus_tag="RTM1035_04555" CDS complement(918661..919863) /locus_tag="RTM1035_04555" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="2-octaprenyl-6-methoxyphenyl hydroxylase" /protein_id="jcventer:1101493006647_RTM1035_04555" /db_xref="CDD:30999" /translation="MTQASYDIVVSGGGVAGLTAAAVFGSAGFSVLCVDPAPPVTARD AAGSDLRTTAFLQPAQALLDRAGLWARLAPHATDLQVMRIVDAGGELPEPRVVREFNA SDISERPFGWNLPNWLLRREMVAHLESLPSVTFKPGTGTATLFTREAEARVGLSDGTR VRCRLVIAADGRGSPIREAAGIHVKTTRYGQKALAFAVTHPIPHDNVSTEIHRSGGPF TLVPLPDHDGRPSSAIVWMEEGPEVARLAALPEPEFEAAMNVRSCHLFGPLTLASRRT VWPIISQVAERMSGERVALVAEAAHVVPPIGAQGLNMSLGDMRVLLELAEANPEALGD RTMLDTYHRRRHFEVQARVTGIDLLNRASMLSTQPLRDARAQALSAIYSLAPVRKTLM QMGLGARG" gene complement(919898..920116) /locus_tag="RTM1035_04560" CDS complement(919898..920116) /locus_tag="RTM1035_04560" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04560" /translation="MTATTAPTTAAHDTAKSHDPDAAAVGPILLSVAVFLAGWATSIA IWGIPGLYIPALALVPVIWVMLILISRG" gene complement(920203..920931) /locus_tag="RTM1035_04565" CDS complement(920203..920931) /locus_tag="RTM1035_04565" /note="COG1011 Predicted hydrolase (HAD superfamily)" /codon_start=1 /transl_table=11 /product="pyrimidine 5'-nucleotidase" /protein_id="jcventer:1101493006647_RTM1035_04565" /db_xref="CDD:31215" /translation="MAGNLTRFERGIKPWAIARNVAPAYISAMPKPDFTHIRTWVFDL DNTLYPPSARLFDQIEARMTRFVMDMLRVTHAEADRLRHDYWREHGTTLAGLMRLHDL DPGPYLEAVHDISLDKLEPDAALNTAIRALPGRKIVYTNGSAPYAERVIAARGLLGAF DAVYGVEHAGYRPKPEPEAFRTILTQDQSAPDTAAMFEDEPRNLAAPHAMGMRTVHVA PERIEAEHIHHHTDDLGGFLARLI" gene 920950..921600 /locus_tag="RTM1035_04570" CDS 920950..921600 /locus_tag="RTM1035_04570" /note="COG1802 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="Transcriptional regulator, GntR family protein" /protein_id="jcventer:1101493006647_RTM1035_04570" /db_xref="CDD:31987" /translation="MPMKPPPTDAYSLILEAIDVGIFKPGDRLVESDLAERFGVSRTP IREALQRLETQSMLTRDGRSLIVSSLDYNQLAELYVVRAELEGLAAELAARHATPEEV RVLRDMVEDDRALLGKPVELARANRRFHKQIHLASHNRFLVQQLDLVHRSMALLATTS LAAVGRDEDALREHDAIVAGIEAHDSAGAAQALRDHISKAFVTRLKLDSGEVKSTV" gene complement(921541..923472) /locus_tag="RTM1035_04575" CDS complement(921541..923472) /locus_tag="RTM1035_04575" /note="COG1215 Glycosyltransferases, probably involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="glycosyl transferase, group 2 family protein" /protein_id="jcventer:1101493006647_RTM1035_04575" /db_xref="CDD:31408" /translation="MGISELRHMRAQGSGARVPINPLGRELVRAGKISRSDATLAELV RRHCDTSLDRILQAEGLATEDDLLAAHARRLSSTRLSAEDVMRAELVESGLDPRFLLK HGVLPIQSAAGVPVLATGGPDSLASLRPALPRKLDRARVVMAPRHAIQDRIAHEHRDI LRSMAEARVPEIESCRTWGAHQNRRLHLTLAALAVLVALSLAFPITVFSIFAVWACFT LIVSAGLKIAAFVAQTSGRSDAPPAPSSPQPLPKVSILVPLFRETEIAHALIARLSRL TYPKCLLDVILVLEEEDALTRQTLAGIDLPPWVRPVIVPDGKPRTKPRAMNYALDFCQ GDIIGIFDAEDAPEADQITIIARRFQQVPQEVACLQGILDYYNPGQNWLARCFTIEYA AWFRTLMPGMARLGLAIPLGGTTLYFRRDVLEELGGWDAHNVTEDADLGFRLARHGYR TEMIHTVTEEEANCRAWPWIKQRSRWLKGYMTTYLVHMRQPRLLYAQLGPRKFWGFQA HFVSALSQFLLAPVLWSFWLVLFGLPHPLDTVVPHALLVALGSLFLLVEVLNVSIHMA SVSGPRHRHLMAWAPTMHFYTPLGTIAAYKALYELILKPFFWDKTTHGLSVTARGQPN SDGGFDLSGIKLEPGHKGL" gene complement(923568..924716) /locus_tag="RTM1035_04580" CDS complement(923568..924716) /locus_tag="RTM1035_04580" /EC_number="6.3.5.5" /note="COG0505 Carbamoylphosphate synthase small subunit" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase small subunit" /protein_id="jcventer:1101493006647_RTM1035_04580" /db_xref="CDD:30851" /translation="MAQASTPRPTACLALADGSLFYGYGFGAVGVTTAELCFNTAMTG YQEIMTDPSYAGQIVTFTFPHIGNTGVNIEDDETAEPVAEGMVVKWDPTEPSNWRAQE HLTSWLARRGRIAIGGIDTRRLTRAIRQQGAPHVALAHDPNGKFDVEALVGRARSFAG LEGMDLAKDVTCAQSYRWDEMRWAWPEGYLRQTDARHKVVAVDYGAKRNILRCLASAG CDVTVLPASATAEDVLAHSPDGVFLSNGPGDPAATGKYAVPMIQGVLEAGLPLFGICL GHQMLALALGAQTIKMNHGHHGANHPVKDLETGKVEITSMNHGFAVDSQTLPTGVVET HVSLFDGSNCGIRIKDRPVFSVQHHPEASPGPQDSFYLFERFAASMAK" gene 924880..925338 /locus_tag="RTM1035_04585" CDS 924880..925338 /locus_tag="RTM1035_04585" /note="COG1610 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="GatB/YqeY domain protein" /protein_id="jcventer:1101493006647_RTM1035_04585" /db_xref="CDD:31798" /translation="MELRARVDQALKQAMRDKAAGRLATLRLINAAIKDQEIAGRSAD GTIPVGDAEIMAILAKMTKQRNESVRAYEEGGRLDLAERERDEIRIIEEFLPRQLAED EIAAAIDKAIADVGATTIRDMGKIMGKLKERHAGQMDFGAVGPQVKARLG" gene complement(925345..926259) /locus_tag="RTM1035_04590" CDS complement(925345..926259) /locus_tag="RTM1035_04590" /note="COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis" /codon_start=1 /transl_table=11 /product="Twin-arginine translocation pathway signal" /protein_id="jcventer:1101493006647_RTM1035_04590" /db_xref="CDD:42401" /translation="MTLSRRRFLTISAAALSCSRSAQATPLHRWQGIALGARATITLS HPEAERITETARAEIERLEQVFSLYRSTSALSQLNASGHLDVPPFELLDCLSIAATAH RATDGLFDPTVQPLWDLYAHSYGAGHAPSEAEIANARAHGTWSDLRYSATAINLRPGM ALTLNGIAQGYIADRIAHLLQAEGLSDILIDTGELRALGGHPDGGDWPVILDTPGRPH LGLRDRALASSAPRGTVFDAEGTAGHILDPRTGTPATPRWHLISVTAQSAAMADALST AMCLMSAQDIKRAESAISGVSVVQSAAV" gene complement(926261..926833) /locus_tag="RTM1035_04595" CDS complement(926261..926833) /locus_tag="RTM1035_04595" /note="COG4314 Predicted lipoprotein involved in nitrous oxide reduction" /codon_start=1 /transl_table=11 /product="nitrous oxide reductase accessory protein" /protein_id="jcventer:1101493006647_RTM1035_04595" /db_xref="CDD:45470" /translation="MKWLPFLFLLLALAACKEEVATRPDPVPLTAEATGHYCQMDLLE HPGPKAQVHLEGLDHPLFFSQVRDAIAYQRMPEQSHAITAIYVNDMAAAASWDQPGAE NWIDATSAHYVVGSTATGGMDAPELVPFLDAKDAAAFADTRGGHVLRLAEVADTDVLS AVPIATGITDRDEDEDFEARLKHLSRERQN" gene complement(926830..927663) /locus_tag="RTM1035_04600" CDS complement(926830..927663) /locus_tag="RTM1035_04600" /note="COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component" /codon_start=1 /transl_table=11 /product="nitrous oxide maturation protein NosY" /protein_id="jcventer:1101493006647_RTM1035_04600" /db_xref="CDD:31468" /translation="MTAFFRPVFALGTTEFRIALRNRWVTITVALMALFALVLSAAGS APTGDVGVDALSVTVASLTSLGVYLVPLMALLMSFDAVAGEIERGTLSLTLTYPVSRT GILMGKFIAHLAVLTIAVGAGYGLAAITALATDPEAVTGLPALLRLFWSSILLGAVFL ALGYALSAIARRPGAAAGLAIGVWLALVVLYDLGLLAAVVADGGGVFTARALPWLLLA NPADAFRLYNLAASEATAAASGLGGAAQTIPAVHALISVLLWPLAAFGLAVAALRRVT P" gene complement(927660..928553) /locus_tag="RTM1035_04605" CDS complement(927660..928553) /locus_tag="RTM1035_04605" /note="COG1131 ABC-type multidrug transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein NosF" /protein_id="jcventer:1101493006647_RTM1035_04605" /db_xref="CDD:48263" /translation="MPRLTLSQVTKRYDGVTALDAVDFTVAPGERVALLGHNGAGKST LMKIVLGLIPATSGQIEVLGAAPGSQAAREGTAYLPENVAFHPALTGLEQIRLYLRLR GCDPAQAMGLLERVGLGEAARRRIGTYSKGMRQRVGLAQALIGQPRLLILDEPTSGLD PVSRREFYAILDGLAAEGAAILLSSHALTEVEARTDRIVILSKGCLMANDTLHALRRQ AALPIRLQISARPGAADQVAAQLSGGRRNGVMVDLTCAHDEKLTRLGHIAALKGLIED VEIIPPSLEDLYSHFSRRDDQ" gene complement(928522..929856) /locus_tag="RTM1035_04610" CDS complement(928522..929856) /locus_tag="RTM1035_04610" /note="COG3420 Nitrous oxidase accessory protein" /codon_start=1 /transl_table=11 /product="nitrous oxide maturation protein NosD" /protein_id="jcventer:1101493006647_RTM1035_04610" /db_xref="CDD:44951" /translation="MLRLFLSLILLCGAATLVDAAERRVPAETGALTSAIAGALPGDV LTLEPGLHAGPVTLDHAITLDGQGKATIDAGGVGSVVTITGSDITVRGLTLTGSGSDH DAIDSGVQITRSAARVLVEDNDILGNLYGVDVHGPKDATVRGNRIVGRTDHHMNSRGN GVYVWNAPGTIIEDNDIRLGRDGIFVNASNDGIFRRNLMRDLRFAVHYMYANNSEVSG NISIGNTLGFALMFSNRITVHDNLSLADRSHGLMLNYANNADIRGNLVRGGAEKCTFI YNAHRNLIYDNRFEGCEIGIHFTAGSERNAITGNAFVGNRTQVKYVGTKNVEWSYDGR GNYWSDHPAFDLDGNGIADASFRPNDLMDHILWSQPAASLLMGAPAVQLIRWSQKHFP ASLPGGVLDSAPLMRPVLVTVPDTIAAMEAEAMTAARNRKTDDAPFDPLASH" gene complement(929860..931812) /locus_tag="RTM1035_04615" CDS complement(929860..931812) /locus_tag="RTM1035_04615" /EC_number="1.7.99.6" /note="COG4263 Nitrous oxide reductase" /codon_start=1 /transl_table=11 /product="nitrous-oxide reductase precurser" /protein_id="jcventer:1101493006647_RTM1035_04615" /db_xref="CDD:33986" /translation="MSNDVKKSGISRRGLLGATAGGAAALGAMGASRMALLGGAAGVA TAAATAPTTAKAAAASSHLAPGELDEYYGFWSSGQTGEVRILGIPSMREFMRIPVFNR CSATGWGQTNESLNVLTEGMSERTKHYLAANGKKVHDNGDLHHVHMSFTEGKYDGRFL FMNDKANTRVARVRLDVMKADKILEIPNAKAIHGLRPQKWPRTNYVFANGEDEGPMVN DGQILDDPSQYVNFYTAIDADKMEVAWQVMVSGNLDNTDADYDGKYAFSTSYNSEMGI SLPEMTEAERDHVVVFNLAEIEKGIAAGDFIELNGVKVIDGRKGQNKDYTRYIPVPNN PHGCNMAPDKIHLCIAGKLSPTVSVIDVRKLDAVFYEGADPRSVVVAEPELGLGPLHT AFDGKGNALTTLFLDSQVVIWNIEDAVRAYAGENVDPIRSKVDVHYQPGHNSTSMGET LEADGKWFISMNKFSKDRFLNVGPLKPENEQLFSLDGTNLTLLHDSPTFAEPHDSIIV HRSVVNPRNAWDRNDPMWADARAQAEKDGVNIDEWADTIIRDGNKVRVYMSSVAPAFS IESFTVKEGDEVTVIITNLDDIDDLTHGFCMGDHGVAMELAPQATASATFVAAKPGVY WYYCQWFCHALHMEMRGRMFVEPKGA" gene complement(931815..934043) /locus_tag="RTM1035_04620" CDS complement(931815..934043) /locus_tag="RTM1035_04620" /note="COG3901 Regulator of nitric oxide reductase transcription" /codon_start=1 /transl_table=11 /product="nitrous-oxide reductase transcriptional activator NosR" /protein_id="jcventer:1101493006647_RTM1035_04620" /db_xref="CDD:33689" /translation="MKDPLMPLALFLRRRAFGLLARIAAFWIALLALAPAVQAQSPYL ETYLAKVPAATLVEGADSYGAMRNDLPVAPVLRGGETIGWAFITSDFVGTTGYSGKPI HVMVAVGLDAKLTGVKLVKHSEPIVLIGIPEAKVSKLVADFVGLDLVAEAEAGGSGHE LDIISGATVTIMVIDDSITRSGIRVARALGLGGLAPLAAHTGPTFELNPDAQAASDWF TLTGDGTLRRMSLDVGQVNAAFAAMDDPRAAARPITAPEDDTYIDMYATLISVPAIGR QLLGEAEFANLADWLDEGEHAILVAARGLYSFKGSGYVRGGVFDRIILVQGEDSVRFR DRGHRRVGEIMADGAPALSEMDIFKIPADAGFDPAEPWRLQLLAQRDVAAIERVFTTF DLGYQLPAAYLRPVAAPTPAPPLAQETATESAAQTALWSRIWRDKTVEIVGLGVMLTV LTLAFFFQSFLVRSERVTTWFRMGFLTVTLVFLGWYANAQLSVVNLMALFGALTSDFS WQAFLLDPLTFILWFAVAAALIFWGRGAYCGWLCPFGALQELTNRIARKLGVPQWTLP WGLHERLWPIKYMIFLGLFGVSLASIEQAEHLAEIEPFKTAIVLKFARAWPFVAYALA LLAAGLFVERFYCRYLCPLGAALAIPARLRMFDWLKRYRECGNPCQTCAHECMVQAIH PTGEINPNECLNCLHCQVLYQSEAKCPVVIKNVKRRKSASESAAALDRMIANHPNMKK GQ" gene complement(934040..934426) /locus_tag="RTM1035_04625" CDS complement(934040..934426) /locus_tag="RTM1035_04625" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04625" /translation="MIRKYALFLLTSLLALSLALGALTAGRAAGVAAFKATLTQMVIC AGAEGEKTVHLARDGTPVNLPHCEKILCDECLQTGSYVLLTAEFELGAQRVTAADRDQ PGADLHHPEMILTAQSRAPPAAKATA" gene 934566..935036 /locus_tag="RTM1035_04630" CDS 934566..935036 /locus_tag="RTM1035_04630" /note="COG1959 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04630" /db_xref="CDD:32142" /translation="MRLTKFTDYSLRVLLYAATLKPGELTTIEETAKLYDISRAHLKK VVLQLIHEGFLEGIRGRSGGFRLARSPGEINLGQVVRKMEPEFALAECFSPDNACRVT KGCRLPIVLNLALTNFLNTFDDFTLADLAISPRYFETPKLDQYPRRGPHLADSV" gene 935121..937448 /locus_tag="RTM1035_04635" CDS 935121..937448 /locus_tag="RTM1035_04635" /note="COG2183 Transcriptional accessory protein" /codon_start=1 /transl_table=11 /product="S1 RNA binding domain protein" /protein_id="jcventer:1101493006647_RTM1035_04635" /db_xref="CDD:32366" /translation="MTDTAERIARIIATEIDARPNQVVAAVGLLDGGATVPFVARYRK EVTGGLDDTQLRNLAERLTYLRELEARRVAILNSIKDQGKLTEPLARSIAGAETKAVL EDIYLPFKPKRRTKAMIARENGLEPLLRRILAERSAVPEDLAAGYLSESVATVKEALE GARDILAEELTENATLLGRLREFMRAEAVISARVLPGKEEVGAKFSDYFDHREPWAKI PAHRALAILRAAKEEIVTLDIAPDPDTGALRAVGMIEATIGIPGNAPGDIWLRSVAAW TWRVKLSLSMYVDLMGELRNRAHDEAITVFARNLKDLLLAAPAGPRPTLGLDPGIRTG VKAAVVDATGKLIETATLYPFQPKNDLRGAQVAVLEMVRKHGVELIAIGNGTASRETE RMVAEALKLLPQGAKRPMSVIVSEAGASVYSASELAAKEFPGLDVSLRGAVSIARRLQ DPLAELVKITPQSIGVGQYQHDVDQRRLVQALDAVVEDAVNAVGVDLNMASAPLLARV AGLGASLAQAIVAHRDAEGAFPSRKALLKVAGLGPKAFEQCAGFLRIRDSAEPLDATS VHPEAYGVARRIVQACGRDIRAIMGTPEALNGLRAEDFVDDKFGLPTVRDILTELEKP GRDPRPSFVTARFADGVDDIKDLKPGMLMEGTVTNVAAFGAFVDIGVHQDGLVHVSQL ADRFVKDPHEVVKAGDVVKVRVTEVDVARKRIGLSMRKDGAAPETRAKDAPVAARTAK SGKPASAPVRPPKSEPQATQGALGDALRAALRGKS" gene complement(937754..939709) /locus_tag="RTM1035_04640" CDS complement(937754..939709) /locus_tag="RTM1035_04640" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04640" /db_xref="CDD:29151" /translation="MAHLARIEIALQSGDYAGAVSFANEALMHHSDHPEIVLRAAQAC RGAGDYQRALRLVESAPEDTQFAPWFLQLRANLAEDQGAVQDARVLWSKLKSLNLSAF DVLADEAIARLDAAQATQTKDAQGLVAPICEDERHLGLAAPEFDIDRFMLQLDAPRAQ NGLSDDDVLQIVAGSDDIPWYQALQIVRHVWLNRSSDLAERLSKSFASRSWPITDLHA FAIEDQLLRNGPRAALDWVRSHPVARRESEAAERLGRVLVSGGFGMLAVRYLWACCRR WPADPQFLRLATQALIATGAAHRVADLLEKVCSGVDEDWRLACYVSAGLSLGKIGETL MACETQEASGAARAPVVDMIEMSLLVSDLNTAEGFVAKLSKDAGRLEEALISRPRATR VGTLLNEARILAASGWDEGDLGSNMSAIADFFLPARAKVAKQALDVEPPQDVCIPKVP DLIHAIWFDIPETSSEREQLLDAWRQVSRRQVVLHDIRNAQSWLRKNAGSDAARAFAK APDREQKADLLMLGVLLVEGGLTLSATQWPSRDVDPLIDHTKEAGFFIDGRGAVVTDL VMATPGHSVIETAFEKAVASCLDREKDHRWFKTGPGLLTRALALHLCDEDSEARVTLR ALSTVRRLVHPYRPAIRPKIDGGAQYP" gene 940013..940303 /locus_tag="RTM1035_04645" CDS 940013..940303 /locus_tag="RTM1035_04645" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04645" /translation="MRICINDLAEQRLGQVGLTSFGETTREAKAQGCKPTLVTSLAFK LKRQTAQGLSKSAAMIVTVALGHTCAFAFFCLTLHVVPVSSAQFAKWFNTRE" gene complement(940722..941588) /locus_tag="RTM1035_04650" CDS complement(940722..941588) /locus_tag="RTM1035_04650" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04650" /translation="MGSFTSTHSITYSSGSPSIQNGNFTITDGDADTTFEIGDTYFEP TNSLNYEYLGTMEVDGTIWPVFEFLEFPGFFAVFLDQEPVVVPPTLALNSGETFDRAC FAEGTRIATAEGDINVEDLEIGTQVVKSDGTLTRVMWVGKQTTSTRFGSAARNDLIRV DQGALENGLPVRDLTLTADHALFIDGLLVNAGAMVNGYSITQVPLAELGDSHSVYHVE TENHDVILAEGLPVETYIDYIGRQAFDNYQEYVSLYGDARSISENSTPRITTSRYLPA TLRKRLGIKDAA" gene complement(941881..942621) /locus_tag="RTM1035_04655" CDS complement(941881..942621) /locus_tag="RTM1035_04655" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Integrase, catalytic region" /protein_id="jcventer:1101493006647_RTM1035_04655" /db_xref="CDD:40748" /translation="MPQGRADEQRLTDDIIELADQYGRYGYRMVTGLLNNAGWCVNHK RVERIWRREGLKVPQKQKRKGRLWLNDGSCVRLRPERPNHVWSYDFVQDRTADGRVYR TLNIIDEYTREALMIRVDRKLNSTDVLDALTDLFILRGPPEYIRSDNGPEFIAQKVRD WIAAVGAKTAYIEPGSPWENGYCESFNARFRDELLNGEIFYSLKEAQILIEQWRVHYN TVRPHSALGYRPPAPESIVPLDQRPTMH" gene complement(942729..943007) /locus_tag="RTM1035_04660" CDS complement(942729..943007) /locus_tag="RTM1035_04660" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Transposase and inactivated derivative" /protein_id="jcventer:1101493006647_RTM1035_04660" /db_xref="CDD:41572" /translation="MAGKREKPEEIVSKLRQVEVLQGQGATIAEAVRQIGVTQQTFYR WRKLYGGMGRSQLARLKELEKENQRLRRAVSDLTLDKLILTEAAKGNF" gene complement(943058..943330) /locus_tag="RTM1035_04665" CDS complement(943058..943330) /locus_tag="RTM1035_04665" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04665" /translation="MHAARTDLNAYLQTGIHKVDGWCIPQLWQSIWPLRQAIGAGPIA EIGVFEGKFFIGLAKCFAENRHDSVAIDVFDLQQFNLDGAGVGVAP" gene complement(943426..946338) /locus_tag="RTM1035_04670" CDS complement(943426..946338) /locus_tag="RTM1035_04670" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04670" /db_xref="CDD:44144" /translation="MPKERPLRLAIFGTFDVENYGDLLFPLIAKQRLGPLGVEVVAIS PTAHATRYRDAVLPLSYSEFVRDVDRFDAVLIGGGNIVHTKDFELPDYSATAYAALWI GATAQAVRQGLPVIWNGPGVLQQRVDRQAPEWLQRTVDAADRFVVRDNDSAKGLELWS GRRPSVIPDTALDLARLWPLALVKDRFRDIRASLGIPDEKRVVALHVKARSLAGVDIP SFANALEGALRRTGTVAVLVALGRCHGDHAIAEEIRRLKPDCTFSITDTEHLIDMAAV IAGSDAYLGSSLHGHITAAAYGVASKLVAVPLLHKFMGQAVQMNRAQDIATSWAEALD ALPSLLASDPPCLPDAIAVQLDSHWQDAAKLLTSGRKHVRCKDVFSGADPDAALVRAI REENMQALGRASTSNPTTTLPAKKGNFMTETSQTQWDSAAVNQMILGGDLDGASRQID AILDQQPDFLPARLAEVRYALAKGDAAQAVTLASALSEARPENPWVLMSHLQSLCKAA QHDAACTLFLTRLAEIEIDEPMMTTALNTLLGSVPQKKQVTFLKSVHDLKPESSVVQL RLAMRAHVSGDTALTIDMLERAERAGPLPAYAARIKSQVLPLVGTMDAATDAVLSLWE AGAEDVETLCRLCRFAAAAGRFDLSLTVLRRTLDLHPLEWRSLYRLNRIFLDHSEDRA IFETLAQIDATAQTGANWRLQFALFSLRVGQDEHGRAVLASLTDHPATGPTARSLLAA ISALGSAVPRPEVTQDADVRIVKKAGARGTILVFGGFLGGLSHLSDRHLDLLLSEIPA NVIYLRDPYGRVYLNGLPEFGQTEAEMQSGLARRVAELGGGKVLTIGGSAAGYAALRT GLAIGADEVISLAGFVTPALADHDELPHVQQGLVELFSGDLQSYDLRGALNAKPETKL VQIIGGDYAPDVARAQALAGLGNAQVEILAGVDTHHVALPVIADGTLKRRLQEFFS" gene 946520..949510 /locus_tag="RTM1035_04675" CDS 946520..949510 /locus_tag="RTM1035_04675" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="glycosyl transferase, group 2 family protein" /protein_id="jcventer:1101493006647_RTM1035_04675" /db_xref="CDD:30787" /translation="MTDHIANVGFDHQSAPRLATLVQDAEALFKAERFVEAMAVFETA AQLHPPHSTVLIRLAGLSTRMGQLDKAQEYLGVLRERFPDFQWTPMVEGDLAMARLDY ARAIALYREAQTRMPDKAAIKTRLDEAVAEHAREFSWNAPVEIEIWPASGPSTFLEAA PQDRVLVVSWDLGHNVAGRGITMAETICDTRPTAMAGPLFPTYGDALWSPLAEADRRV PIAGWRAPHFRHFLEGALKLVKTWPAATVWVSKPRFPGLLIGLLYREILGARIICDLD DDELAFVKGSAPRDFNSFLAEFNPQDWDRPHGRTWTELGMGILPFVDAVTSCNPVLAS RNTATLVRHGRSQIDAQNAMARRDATRSELGYTPSDRVVLFLGTPRRHKGLVELAHAV VALNRPDVELCIVGSVADPDMERELSAIPGLKLRRIGAQPFSRVLDLNAVADVVVLLQ DHDSPITQSQTPAKLTDAIAVGTPVLVTEAGPVADVIASGAAMAIRKGDILVHRLEAA LAADRQSGHAHPFFANEMSYEANLPRALQAIAAAHAAPPRVYPDMPGLLSFLRREMPG VLSSDIGTLTAPWLAHATAPAPLVDPDQPINVVFFWKQNDSGLYGRRQDMLLHELSLR PEVGRILHIDAPFPVTDLRVHTNPMRAPVNAEGPIIAATTLARMTGLADEGNIHRRSF LIGTPGQTMLGRPVHSHESFPNAVEAWMDDLDMRNNCIAWVCPVVQGFEQVQQRLRFP FVIGDYIDDQRCWPMSEQRRRKIEQNYRFMAQTVDVAITNCAAMQEALKQESLAPLLV PNGIDMRAEMPVAAPEITLLGGPVIGYCGNMDDRFDFELVEALAQARPQWQIVLIGKL SRPAHRERMTALPNVHLLGIRPYDQARACIAGFDVAIVPHERSDLSDRMNPLKVYVYR ALGLPVVATDIANLDDLRDDLTIAEGADGFVTAIEAALVRVAKQGRRFLPPDLRASLS WQNRMDTIWSEVDQRLRSKMSGSV" gene complement(949577..950698) /locus_tag="RTM1035_04680" CDS complement(949577..950698) /locus_tag="RTM1035_04680" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="putative cytochrome P450" /protein_id="jcventer:1101493006647_RTM1035_04680" /db_xref="CDD:32307" /translation="MAAPPALDPNADPLLVGLPKQRGYGQWIVSRMCDVRTVLTDPTT TVDMLTPKAMARFMSQQGVTLEQTMEIVRIVARAHRVPNDAERRDAIAITRLFQGTLQ DLDMASALGAIASTEGRTVDVMADLLRPILGACRATALAIDPELGQRVEDGLLAIMLT VERHGPSDLAPVEPLARAVMQDLSILEKTRGKAREMPITHWIFPAFLALLPITYTSVS MLAHLAETPELQETLRARPELRPGYIREVERLMTSIRYGTRQIGATGLNLGDVWLPPR SLVVLDFSAANRDPALWQEPDTCLLDRPRQPTATFSLGPLACVGGQASRQFLSLLLDA VMQRVRVSLPQPGAEPDRLVTQWSITRGYRLCRLCLSTL" gene 950736..951683 /locus_tag="RTM1035_04685" CDS 950736..951683 /locus_tag="RTM1035_04685" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04685" /db_xref="CDD:40622" /translation="MKSSGQDGAGESIKDMSKVFPAKVTGLSTPDISIAITCWNMERE LPRTLWSLSRAFQQGADDLTWEIIVVDNGSDRLPLSPTMKPAPRILAARHPAPSPVGA MNEALALARGQIIGAWIDGARMASPNLLASVARAAKAHQAPVIAIPNRQFGSERQATA ALQGYDRAAEDALLAAAGWPEPSADLFAVSWPEEPSPTAPMLESNALFLHRNNWAALS GYDPAFVEAGGGMCNPDMLDRALRHPGTQFIRMSGVATFHQFHGGTSTSDEMRAVEMV KKATRAYVALRGHPPRKQRARGWVYDATTATMDYGSSKV" gene complement(951755..952579) /locus_tag="RTM1035_04690" CDS complement(951755..952579) /locus_tag="RTM1035_04690" /note="COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin" /codon_start=1 /transl_table=11 /product="phytanoyl-CoA dioxygenase family protein" /protein_id="jcventer:1101493006647_RTM1035_04690" /db_xref="CDD:45617" /translation="MTEDIMQSYARDGYVSAVPVMTEAEAAELVAKFEQVEERLGPSI FKLLNVKGHLLFPFLWDVVQDARIVARVAEILGPDVLCWGSSFFCKQAGSADVVPWHQ DGTCWGLNAPRGLTAWLALTPSTPETGCLRVIPESHTAAVPHAVRNAASSMLPLGEEV REPVDETRAVDCVLRPGEMSLHHVMLVHGSATNRATTGRRIGFAIRYIAGDVAQRGTT KGYATMVRGQDHGTYLLEAKPKIDLEPEALRRHRDILRHSAGIVMREAATLDADPR" gene complement(952576..953448) /locus_tag="RTM1035_04695" CDS complement(952576..953448) /locus_tag="RTM1035_04695" /note="COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04695" /db_xref="CDD:45617" /translation="MPSTDAYSSQRHALTPESCASFGHDGVLCPLDVMSEEEAATIRA HIEAQEAQSHGRLSGLTRVKPHLLLPFLWDIVHDPQIVGPVSSLLGPDIYCIGSSIID KPAGSDGYVAWHQDATFWGLSDAIGATAWLALSATNSESGCMEVIPGTHTRQLAHLDT QDARNMLGAREAVRQEIDRSLARALVLRPGQMSLHHPLVLHGSGRNLSSDRRLGFVIR YVPATISQDGATVTLVSGRNISGMPLETAPEGALSADALARHADVIRQAGRVIRRAKE AHLRQVDPSPETGT" gene complement(953452..954753) /locus_tag="RTM1035_04700" CDS complement(953452..954753) /locus_tag="RTM1035_04700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04700" /translation="MGNACGKRPLDIMITGMFDMPNFGDLMFPVVAAHELGRRGCRVH AMSPTGAETGLREAMASRDLATAFDPLAPCDGLLIGGGYIVHTHRMDPLKEYREGGIG AAIGPLTWLGATLAAALRDVPVAWNAPGVPHPLRPGLKPLAAAAFDCADYLALRDAGS IRMVGLSEHPEVEIVPDTILGLETVWPKAELAQDFARVCATLGVTRTDRVLATHVRRR SLGEASLCDLAESLAQMCTRLDVSPIVIGLGTAHADDRMARELTAALVARGVAAAALD RPRGLRDIAALLAHARAYAGSSLHGYITAAAYGVPGLLVARPAYRKFDGLVRHLGRSC DLMKDWPEALAALEQAVQGPSQPIPPDVLARLDRHWDRVAETFRAGPDAKRRERLAFA ALAFREGLRQDGLSWAMTPFSTPQDRKAALTGQDIHETEPF" gene complement(954756..955040) /locus_tag="RTM1035_04705" CDS complement(954756..955040) /locus_tag="RTM1035_04705" /note="COG3321 Polyketide synthase modules and related proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04705" /db_xref="CDD:40636" /translation="MPSRTPLIQPADKGVIRGGMAAYITTVIKVPDPVSTKDRFDVYG LDTTETTNIGAQKNEQFAIQVNPNEVFDNPSVRALGHHLAHPIGESRATT" gene complement(955454..957733) /locus_tag="RTM1035_04710" CDS complement(955454..957733) /locus_tag="RTM1035_04710" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04710" /db_xref="CDD:32408" /translation="MLRGDQRSVRESYACSNCRFTLRWRDQAGVIVDEFGRGRAISLD QLVERGLLNDISIYEPALRGPFVARLKGLQNYVRSYFRPDEPLGDVSSDGVRNEDLTR LTFQDNSFDLIITSDVMEHLPDIEKAFAETLRVLRPGGIHVFSIPNDYPLPDRTETRA RLEQGTLVHLKPERYHNAGDGTKCLVFTDYGSDLSEIIRSLGGHLAVVRRSGVQEPCY TNATFVMRKVASPEMRSVHSAVQPPVQERAKDLECPICKGSEYEDFNGRQNARCSTCR AVERNRLMWMILDRLGGFEPGKRVLQLAPEPSLARKFNDLSGDAYHGAEVNAERFQKS QNKSIRMLDLCTDLAAIPDASYDVILHNHVLEHVPCDVREVLRQLDRILAPGGLHFLS VPIRGEKTDEDLSPDLTDAERLARFGEKDHMRIFGSSDLRDLLQEVWGTGPHLIEPIE IFDRDDLRRAAIPTAARQGASGHSVFHYCKGAHPPAVVLAEARSKSAPKPERTIAPGA SAAVRTARNEVDASYPAEDAPPGSQLMLGLEALRRDNPWPDFPWEDHAPFKLALDANG DGGRDIVLREIVAKDVRLMVEVGCFLGGSALHWLTANPDLNLIGVDPWDGNWADYVLG MAHHPSMSLHVEHLSDTEVKRIARLLSDYGNFAVALNNLRDFRHRFYPVRRFSPEALY YLRRREIPVDMIYIDAFKHRADLDAAYALYPDAILCGDDWLWPDESGCFVMQEAIKEF ARDHGFEIEAKRQTWVLHK" gene 958065..958931 /locus_tag="RTM1035_04715" CDS 958065..958931 /locus_tag="RTM1035_04715" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04715" /db_xref="CDD:40766" /translation="MNNKLFSNLFLSIGAMKAGTTWLYAVLERHPELHFTPEKELHYF YHRYVDNSYLNEKRRLKDAKDRYLFRYDPEKANIDRIRANLHWVSNYLNSPLDDFWYR NLFQLRDHQVWACDFSNLHAFVPEAAWPRISADCERLRVLYTMRHPLKRLWSHTKFHL QLTGKLHLLDEWTAGDYETFVRLPHIWDNAEYGAVLRRMKSGLKEQERMVMFYEDLHA DQRGTLARIEEFLGVAPFQYPQPLLNRRFTESASRPMPDFFAKIFAQDIERITHEVET EGFVVPKEWQSH" gene complement(959360..959444) /locus_tag="RTM1035_t05778" tRNA complement(959360..959444) /locus_tag="RTM1035_t05778" /product="tRNA-Ser" gene 959723..960655 /locus_tag="RTM1035_04720" CDS 959723..960655 /locus_tag="RTM1035_04720" /note="COG3087 Cell division protein" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="jcventer:1101493006647_RTM1035_04720" /translation="MTIAEQGKGGQVRLSRLVLVGAAMMLLAGCEEGAPSWLKPDSAA QSSTGGATPARQSVKLVERDVEAPDVFQVTDMGLWDGRPSLGGVWVAHPDVKEPERVI IRSTADSKFVIGALFRRARDIPGPALQVSSDAAAALGMLAGAPVQLNVTALRREEAKE ETPEPETAPDAAEVLAAPSEIEATALDPVAGAAAAIDAAEASAETPATATQPTVAAAP IPAPAATPTPPRASGLDKPFIQIGIFSVEENARNTATAMRQAGMVPTVLEQNSQGKAF WRVIVGPATSSSERAALLKKIQGIGFEDAYAVTN" gene 960671..961834 /locus_tag="RTM1035_04725" CDS 960671..961834 /locus_tag="RTM1035_04725" /note="COG1686 D-alanyl-D-alanine carboxypeptidase" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase" /protein_id="jcventer:1101493006647_RTM1035_04725" /db_xref="CDD:31872" /translation="MRLIRHIAAATLCLGVALPAQAFETSAKAAYVMDVTTGTVLLDK NADTPMPPASMSKLMTLYVAFEAVRSGRLTLDERLPVSQHAMSYGGSTMFLDTTDRVR VEDLLRGIIVLSGNDACAVIAEALSPDGTEAGFARFMTQRAQQMGMTNSIFRNASGWP AEGHVMSMRDLALLARHIIEDFPEFYPMFAETEFRFDGRAPSNISNRNPLLGLGIGAD GLKTGHTEQAGFGLTGSAKQGERRVVFVISGLATAQDRARESESIVNWAFRQFAEKSV LTAGEEVARAAVWMGEATSVGLTVAEDVSTLLPVLDGGELKGEVVYTGPVRAPVAKGD VLAELVFAPEGLPSTRVPLVAAEDVAQGGFMTRIRTVSGVLLTRLQQGPEGAL" gene 961831..962457 /locus_tag="RTM1035_04730" CDS 961831..962457 /locus_tag="RTM1035_04730" /note="COG0125 Thymidylate kinase" /codon_start=1 /transl_table=11 /product="thymidylate kinase" /protein_id="jcventer:1101493006647_RTM1035_04730" /db_xref="CDD:30474" /translation="MSGQGLFLSFEGIDGSGKSTQARRLAETLRAKGRDVVLTREPGG SPGAEEIRRLVLEGDKDRWSAETEILLFTAARRDHLERVIAPALARGAVVICDRFADS TRMYQGLGRADLRGIVDQLHALMIGREPDLTVLIDIDPGVGLGRALSRGGDEARFESF GEGMQARMRTGFLALSQEFPARFTVIDGARDMDAVAEDVARVVQAHLP" gene 962454..963578 /locus_tag="RTM1035_04735" CDS 962454..963578 /locus_tag="RTM1035_04735" /EC_number="2.7.7.7" /note="COG0470 ATPase involved in DNA replication" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit delta'" /protein_id="jcventer:1101493006647_RTM1035_04735" /db_xref="CDD:30818" /translation="MNDDGLLPEPDRVEGAPHPRETVQLFGQSAAEAEFLEAFNTGRL HHGWLITGPRGVGKATLAWRIARFLLATPLVQDEGLFGAPPPPATLDVAPDHPVARRL LALSDPGLFLLRRGPTDKGDRLAAEIRVSEVRKLGNFFALSAADGGRRVVIVDAADDL NTQAANAILKMLEEPPARTVLLLISHQPSGLLPTIRSRCRTLRLAPLGPQEMAQALEQ AGIAPEGDPAALAELSGGSVGAAVRLLNLGGLKLYAELVGLMESLPRLDRPRALRLAE AAATRGAEDRLDLLFSLTDLLLARLARTGATGQPPSAEAAAGEAAMLARLAPDAYQGR AWADCAETIGARARHGRAVNLDPASLVLDTVFRIQQTAGA" gene 963600..964391 /locus_tag="RTM1035_04740" CDS 963600..964391 /locus_tag="RTM1035_04740" /note="COG0084 Mg-dependent DNase" /codon_start=1 /transl_table=11 /product="hydrolase, TatD family protein" /protein_id="jcventer:1101493006647_RTM1035_04740" /db_xref="CDD:30053" /translation="MSTDIRITDSHCHLDFPDFDEERDQVISRAVAAGVHRMVTICTR LDQEPRVRAIAEAHAPVFYAAGIHPMRAAESPLVNVDDLVKLAEHPKFVGIGETGLDY YYTAESAEVQKQSLRVHIEAARRTGLPLIIHARSADDDMARILAEEYRNGAYTCVMHC FSSSAELARAALDLGFYLSMSGIAAFPKSQDLRDIFASAPAERILLETDAPYLAPPPH RGRRNEPAYTLHTGQKAAEVFGMGWAEFAAQTEANFERLFTKAVL" gene 964391..965188 /locus_tag="RTM1035_04745" CDS 964391..965188 /locus_tag="RTM1035_04745" /note="COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04745" /db_xref="CDD:31428" /translation="MAELRFIILGCGSSGGVPRLGGHWGECDPTNPRNTRRRCSLLIE RETEGGITRVLIDSSPDLRAQLLDAGIGALDAVVYTHSHADHVHGIDDLRMIVFNMRK RLPVWADGDTQNALYSRFGYAFVQPADSPYPPILDMHTIDGPFEIEGAGGAIALTPFQ VNHGSIDSLGFRVGDLAYLPDVAAIPEDVWPVLSGLDCWILDALRRTPHPTHAHLALS LEWIARAAPRRAVLTNMHIDLDYQTVAEETPAHVTPAYDGMILRYTV" gene 965194..966123 /locus_tag="RTM1035_04750" CDS 965194..966123 /locus_tag="RTM1035_04750" /note="COG0679 Predicted permeases" /codon_start=1 /transl_table=11 /product="malonate transporter, putative" /protein_id="jcventer:1101493006647_RTM1035_04750" /db_xref="CDD:31023" /translation="MQALFEIILPVFLVIGFGYLAVWRRWFSQAGVDGLMSFTQKFAI PCLLFTAISRLDLGQSFDWRLLLSFYVGASSGFALGLLGARLIFGRTWEDAVAIGFCC LFSNSLLLGLPIMERAYGADALAANFAIIAVHSPFCYGLGITVMEIVKARGTAGPKVV VKVLKAMFSNTLIMGVAAGFVVNLSGLVLPAPVEDGLDLMARAALPAALFGLGGVLVQ YRPEGDLRVILYVCLISLVAHPAITFGLGLGIGLPVEGVRSAVVTAAMAPGVNAYVFA NIYGHAKRVAASSVLLSTGLTIVTAWIWLQVLP" gene complement(966148..967167) /locus_tag="RTM1035_04755" CDS complement(966148..967167) /locus_tag="RTM1035_04755" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04755" /translation="MAPKTKVPETEVPQTYNILIVGQAGRLQYEAILFAASLRATSPG FAGRLFVAEPQPGPLWGDDPRIKDEDSRALLTDLGAEFVAFESRHFGAAYPYGNKIEA LFALPKGEPFVFFDTDTLICGDLASVPFDFSRPTASLRREGTWPQIELYGPTHTQIWK SLYDKFGLTFETSLDQGQPEGYWQRYLYFNAGFFFYRCPHVFGRRFLDYALSIRDDGP RELLLQSLDPWLDQVALPLVIHSLGGGRDTLPPDLLDGQISCHYRFLPLLYAREADHV VEVLQEVTAPNKIKRVLKNYEPAKRMIYQGRGMKVRALFDQNDLPRREQVIRNTIKRN GFWMR" gene complement(967260..967997) /locus_tag="RTM1035_04760" CDS complement(967260..967997) /locus_tag="RTM1035_04760" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04760" /translation="MFARFAALLTILSLAPPAHAQDWNAQITPYAWGTGIGGTITPRA GGPSLRFDKGLSDVLEDLDTAFFLTGYARYQRLVVMGDLSHSASSRRGTVPLPPPAPG LPARGRIEQSSLTLTAGYRALTTPDAMVDFMAGLRHWQVEGRATTPVPGLAAGIDVSF TDPILAARTNLRLTDRWSFIGYVDVGGFGAGSDMTSQLVGTLNWQASDRLWLSAGYRH LYVDYSKNGRKFDATFSGPLAGLTLRF" gene complement(967997..969331) /locus_tag="RTM1035_04765" CDS complement(967997..969331) /locus_tag="RTM1035_04765" /note="COG1228 Imidazolonepropionase and related amidohydrolases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04765" /db_xref="CDD:30042" /translation="MLGGLAAVVGLYAGFGLASKPARAQAPGRPLLLTNLRYFNGHDL SLIQGREILIDGGRITGLPAAGQGPTEAERIDCGGRAVIPGLIDAHWHSTLVGVTQLQ AMTADIGFVHLMAGREAGATLLRGFTTVRDTGGPAFGLKLAIDRGALPGPRILASGAM ISQTSGHGDFRMTSELPRADGDLSYSERVGVVAIADGRAEVLRRTREQLMKGASQIKI MAGGGVTSLYDPLESLQFTEDEMRAAVEAAEDWGTYVCAHVYTPKGIQRALRAGVKSI EHGQLADLETVRLMRDMGAWWSIQPFLADEDSNPSSDPRQNAKRQEVSVGTVQAFEMG RTVGVNMAFGTDILMNPTGASSQGRQLAKQTRFMPPLEALRMATGAAGDLLALSGERS GYDGQLGVIAEGAMADLLVVESDPEAGLDWLDTPEQSLAMIVKGGAVVKDQL" gene 969839..970615 /locus_tag="RTM1035_04770" CDS 969839..970615 /locus_tag="RTM1035_04770" /note="COG0566 rRNA methylases" /codon_start=1 /transl_table=11 /product="RNA methyltransferase, TrmH family, group 3" /protein_id="jcventer:1101493006647_RTM1035_04770" /db_xref="CDD:30912" /translation="MKKPRWVIDKEQAKRAAASETVWLFGLHAVRDALENPAREKLRL IVTKNAADKLEAAIAASGITPEEVDPRKFNAPLDPGSVHQGAALEVKPLDWGPMAEVC LGDGRTAPRVVLLDRVTDPHNVGAILRSAEVFGARAVIAPRHHAAPETGALAKTASGA LERQPYLRVRNLADAIIELQAMGYTVLGLAGEAELTIEAALEGKRDRPVALVLGAEGP GLRERTREVCDALVRIEFASDFGSLNVSNAAAVALYAARG" gene complement(970597..971490) /locus_tag="RTM1035_04775" CDS complement(970597..971490) /locus_tag="RTM1035_04775" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04775" /translation="MTDTNAPLPDLRDLPFDIDLRRLNLGVGYVALGLPGSLGLVSLL TNTCFNASISHYYFSRIGGDILVGALSFIGLLLMFFYSFRAPGREGCLGWHWYDVVLL KLAGVAAVIVAFVPTTGSGCTYSGEVARVFLTNASGSEGFHPPGGTVAGTISYDFWAS FAALGADVPTVLKMMHFGAAGVMFLVLGYFSAYVFTRENSTAARLAGNRKDRRNLWYR TLGRIIFAVVGVLAIKAALLEMILPLGLAQSIEAIWDSLRLTFLFESLGLCAFGLSWM IKGRFIAAFEDAAARPQPRAA" gene complement(971564..972331) /locus_tag="RTM1035_04780" CDS complement(971564..972331) /locus_tag="RTM1035_04780" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04780" /db_xref="CDD:30770" /translation="MAIPDTLAARLIETVKGHELNGSFLMLGRQRWIGSRRGASSRVF AQALADHLPGLSEADLVPEGATYSEPFFEKLGFASVDSMDYSDFEKASIIQDLSAELP KKLERKFDVIYDGGTCEHIFDLPTAYRNIHKMLKPGGVLIGHSPCNNWVNHSFYQINP EMVYGFWEATLGYEVLHCALQPIKPAHARKVVTTTNPNVTGKRPRLSGSLAEGGIILD YAVRKPKRSTKSADKVYQSDYVNRWTAPDQESTEDAA" gene 972775..974571 /locus_tag="RTM1035_04785" CDS 972775..974571 /locus_tag="RTM1035_04785" /note="COG1132 ABC-type multidrug transport system, ATPase and permease components" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding/permease protein" /protein_id="jcventer:1101493006647_RTM1035_04785" /db_xref="CDD:31327" /translation="MVRRAENGADLLDREKSKHVGALAELWPFLRPYRKLLTAAVLAL VITASVALMLPLAVRRVVDNFSAENGAILDQYFAAAVLIAALLAVGTGLRYLLVTRLG ERVVADIRKAVFDRVIGMSPAFFERLMTGEVLSRITTDTTLILSVIGSSVSIALRNLL ILIGGMGLMMLTSAKLTGLVLLIVPLVIVPILTLGRRMRVLSRENQDWIAQSSGNASE ALLSVQTVQAFTHERESRARFGDVTERSHDAARRRVNTRALMTVIVIFLVFTGIVGVL WIGARDVRAGGMTAGSLVQFVIYAVMVAGAVAALSEIWGELQRAAGATERLVELLQAE DPVRDPARPSPVPRPVRGEIAFEDVQFAYPSRPGIPALDHVSLTIRPGETVALVGPSG AGKTSVIQLIQRFYDPDAGRITLDGVSLADMARHEFRRDLALVPQDPVIFAASARDNI RFGRLDATDAEIEAAAHAANAHDFICRLPDGYDTYVGERGVMLSGGQKQRIAIARAIL RDAPVLLLDEATSALDAESERAVQSAVEAMARTRTTIIVAHRLATVKKADRIVVMDQG RIVAQGTHDSLVAENGLYARLARLQFTDGEAA" gene complement(974690..975124) /locus_tag="RTM1035_04790" CDS complement(974690..975124) /locus_tag="RTM1035_04790" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04790" /translation="MRKIITAATLGLAALTSPVMAEDAKQMVTILTSAEPQTQLMGMV LTMQTMQAGASSYVLLCGPAGDLALKDAPASATAPQAPMGMSPQGLMQKIMETGATIE VCAIYLPNKGVDETALLDGITAAKPPAVAARLLAEETRIMSF" gene complement(975240..976871) /locus_tag="RTM1035_04795" CDS complement(975240..976871) /locus_tag="RTM1035_04795" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase-like protein" /protein_id="jcventer:1101493006647_RTM1035_04795" /db_xref="CDD:29654" /translation="MQDSPPKDMLGTHEVTNQPASRGDLDLWADDPGLQTHATAAGAD PETLAAYGARIGTETLRSAGRAANRHPPELVLFDAGGRRLDEVRFHPTYHDLMRVGIG AGYAAIPWEGAKGGHVTHAAMVYLTSQVEPGVCCPMTMTYAAVPALRSDKALFADWVP KLTARAYDPGAKPLARKPGATLGMAMTEKQGGSDIRANATTATPEGAFYRLFGHKWFC SAPMSDGFLTLAQAPEGLTCFLVPRWLEGARNEIQIQRLKDKLGNRANASAEIEYHGA IAYRLGDEGAGICTILEMVHHTRLDTAMAPAGLMRAALDHARHWAHHRSVFQRQLIDQ PLMRAVLADLALDWEGTLALGLHVARAFDGRSPAERAFARLGVALAKFLGNKLCPGVV YEAMEAMGGMGYIEDTPLPLLYREAPLNSIWEGSANVICLDILRTLRKEPLAGEVLTA ELASVAGQDRRFDAALKAHMQTFPKLPEEAQARWYAESLATLLTASVLMRHAPDAVAQ GYIATRLSDPRGRVAGAIGTLDTGPILARLGQAHH" gene 976950..977297 /locus_tag="RTM1035_04800" CDS 976950..977297 /locus_tag="RTM1035_04800" /note="COG2919 Septum formation initiator" /codon_start=1 /transl_table=11 /product="Septum formation initiator" /protein_id="jcventer:1101493006647_RTM1035_04800" /db_xref="CDD:32743" /translation="MMPATPDTRRIEEAEQSMTPRSRPWGLLIFFLIAFFLGAYFTFA AVQGDYGLFRRAEIDAQSVELQAQLDALNVRVARMENLTRRLSDGYLDLDLLDQQARE VLGLLRSDEIVIR" gene complement(977353..977811) /locus_tag="RTM1035_04805" CDS complement(977353..977811) /locus_tag="RTM1035_04805" /note="COG2927 DNA polymerase III, chi subunit" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit chi" /protein_id="jcventer:1101493006647_RTM1035_04805" /db_xref="CDD:44277" /translation="MGAVYFYHLTRQPLEATLPMLLEKSLGAGWRVVVRGREAARLVW LDERLWLGPEDGFLPHGVAGGAHDADQPVLLTTDHARPNGAACVMAIDGADVSGEEVQ SLQRVCILFDGNDDAAVQVARGQWKALTGAGCAAQYWSEAGGRWEKKAEA" gene complement(977811..979298) /locus_tag="RTM1035_04810" CDS complement(977811..979298) /locus_tag="RTM1035_04810" /EC_number="3.4.11.1" /note="COG0260 Leucyl aminopeptidase" /codon_start=1 /transl_table=11 /product="leucyl aminopeptidase" /protein_id="jcventer:1101493006647_RTM1035_04810" /db_xref="CDD:48344" /translation="MTTPLHVVFAETDLEALATAPGRIAVIIPPEGKLDAGARKINRM TRGTLARLVEAAALNDKKPGDVISINWPSGMVAEAIDVVILPRSASPAESRRAGVNLS RLKGDKPLLILGSALRRPVDVLLGVLLRAYDFTPHKSQPKKDTAPKDPGAVTLMTGRP DEVKAEAAPTLALAEGVFFTRDLVNEPANHLTTTEFANRIAAMKDLGLKITILEEKDM EKLGMGALLSVGHGSASPSKLAVMEWLGGPKGEAPLALIGKGVVFDTGGISLKPAAGM EEMTMDMGGAGVVAGVMRTLALRRAKANVVGLVGIVENMPSDRATRPGDVVTSMKGDT IEVINTDAEGRLVLADVLWYAQETYKPRGMIDLATLTGACIVALGHENAAVLSNDEGL CNAFLRAAKTEGEGAWRLPLGPGYADMIKGQIADIKNSAGRPAGTITAAEFLHRFVQE GMPWVHLDIAGVASVKADTTYAPKGATGWGVLALNRLVADMLEES" gene 979448..980569 /locus_tag="RTM1035_04815" CDS 979448..980569 /locus_tag="RTM1035_04815" /note="COG0795 Predicted permeases" /codon_start=1 /transl_table=11 /product="permease YjgP/YjgQ" /protein_id="jcventer:1101493006647_RTM1035_04815" /db_xref="CDD:43659" /translation="MLSQFMVLFGFFALVLVSIFWINKAVRMFDRLIGDGQPAWVFVE FTALTLPGVIGVVLPIAAFAAAVYVVNRLSSESELTVMQATGYSPLRLARPVFVFGVI VAVMMSLLAHFLIPSSLSQLRLRLDEVSRNITAKLLSEGEFLHPAPGVTFYIREITLS GELRDVFLSDRRDPEAPVTYTSSRAYLVQEGGGTRLVMVSGLAQNIRAEQNRLFTTYF DDFSYDISSLVRRDVVNLDEVAFAGTLEMLRDPEAVAARTGVSMGAVMAQMHGRITAA LLCVIAALVGFCTLLVGAHSRFGVWRQVLLAFGLLVGLKIVESLVLAPVLASAVLWPL LYLPALIGLALSGLLLALASYPGLWHRLRRKGPAAEVPT" gene 980521..981657 /locus_tag="RTM1035_04820" CDS 980521..981657 /locus_tag="RTM1035_04820" /note="COG0795 Predicted permeases" /codon_start=1 /transl_table=11 /product="permease, YjgP/YjgQ family protein" /protein_id="jcventer:1101493006647_RTM1035_04820" /db_xref="CDD:43659" /translation="MAPAAAQGACGGGADMILERYFGRRFFVSFMGVTITMLVIMGLI DLMDELGDFPELAFGQVLGIVLLKLPEAYYEIIPLVMILASVALFLRLARSSEMVVLR ASGRSALRGLLAPAAVALAIGLLGLAVGNPLVAATAKRHHDLVNTYSGQTYSDLAIAS EGLWLRQGGTAGQTVIYAARSSSDLSTLYGPSFYDFAPDGQPLRRISASTARLETGAW LLEDAKIWDLAENINPEAMARQEAQLSVPSDLTQDRILDSFGSPEYIPIWELPKFIDQ LEEAGFSARRYAIWFQSELAQPVFLVALVLISAALTMGHTRGANVGLSVLTAVLLGFG LHYVRNFAHILGENGQLPILLAAWAPPVASLFIGLGILLHLEDG" gene 981654..983825 /locus_tag="RTM1035_04825" CDS 981654..983825 /locus_tag="RTM1035_04825" /note="COG1452 Organic solvent tolerance protein OstA" /codon_start=1 /transl_table=11 /product="organic solvent tolerance protein, putative" /protein_id="jcventer:1101493006647_RTM1035_04825" /db_xref="CDD:31641" /translation="MIRQIRLFLVLLLSLASPLAAQDAPSDPAVLVADDVRLTADNRL IATGNVEALYQGRRLTAREITYDHGTGQLAITGPLTLTDVEGALVVADSAELDRDLTN GILRGARIVMQDQLQLAAVEMRRTDARFNQLYKTAVTSCRVCDNGRPPLWQIRAQRVI HDEQERQLYFDNAQFRILNTTVLYLPRLRLPDPTLDRARGFLTPSLVNSSLLGTGIRV PYFIPIGDSRDLTLAPFLATNSKRLEFRYRQAFRQGEIEFNGAVAEDDFSPDPTRGYL FGTGRFELPRDFILRFNVELSSDDTFLLDHGFSDKDRLINEVSVERARRDEYIRGAIT HFQSRRVGESNATLPTLAGNAEYERRFFPTRIGGELRFGAALHSHYRSSDSTLATLDR FADGRDVTRLTTRLDWYRGWTLPAGVLASFQTGLILDHFEISQAGITAASQATELTPT LALELRWPLLKSTRHAVTHVIEPVAQLSWSGGSNPDIPLDEATLIEFDEGNLFNPSRF NAPDRRERGYSAAYGVSYTRFDPAGWQGSLALGQVWREERLLERDGLTPSFAKSSGLR ARASDLLIAGQFRNATGLTVTARGLFDSMFDTTKAEARASWRNDDTNIAATYVWLSAD PAENRPAKVSEWAIDGSYRFAQHWTGHAEWRFDAAAERSVRAGAGLTYSNECVDITLS VSRRFTSSTILEPETNFGFTVGFTGFSSATRDRSFTRTCRN" gene 983831..985075 /locus_tag="RTM1035_04830" CDS 983831..985075 /locus_tag="RTM1035_04830" /note="COG0760 Parvulin-like peptidyl-prolyl isomerase" /codon_start=1 /transl_table=11 /product="PPIC-type PPIASE domain" /protein_id="jcventer:1101493006647_RTM1035_04830" /db_xref="CDD:31103" /translation="MTPIFRRLIAALTLAVTGLLVWPLSGGMAQAQNLFSPQIYVNDQ AITGYELQQRARLLTLFRAPGDPQRLAREQLIEERIKIDAARASGLVLEEDLVRDGME EFAGRANMTADQLIAALGDSGVSQESFREFVRAGITWRELTRARFAARVSVSEDDLER ATRALTGGAAVRVLLSEIILPVTSLEDAEAKQALAASIAESTSEGAFAEAARRHSAAP SSSRGGRMDWVALSELPAGLRPIVLGLAPGEVSDPLPLEGALALFYMRDIEEMTVPSP EYAAIEYAAYYIPGGRSEAALQRAAQVRAAVDTCDDLYGVAHGQPPEVLERGSKAPEE IPQDIAIALASLDPGETSTSVTRANGQTLVFLMLCGRSPKLDGEAPSVEDLSNFIRNQ RIESFANGYLEQLRAEARIVEK" gene 985072..986043 /gene="pdxA" /locus_tag="RTM1035_04835" CDS 985072..986043 /gene="pdxA" /locus_tag="RTM1035_04835" /EC_number="1.1.1.262" /note="COG1995 Pyridoxal phosphate biosynthesis protein" /codon_start=1 /transl_table=11 /product="4-hydroxythreonine-4-phosphate dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_04835" /db_xref="CDD:44080" /translation="MSAPIALSCGEPAGIGPEIAAAAWDRLRGALPFFLIGDPAHLPP GTPIAQITDPAEASAACATALPVLAHAFDGPLTLGTPNPAHARGVIDVIARGVDLVQS GAASALCTAPIHKQALQDGAGFAFPGHTEFLAHLAGVGRVVMMLASDQLRVVPTTIHI PLKDVPQALTPDLLEETIRITHAALIRDFGLSAPRLAIAGLNPHAGEGGKMGREEIEV IAPVISRLRAQGFDLRGPLSADTMFHASARATYDAAVCMYHDQALIPIKTLDFDRGVN VTLGLPFIRTSPDHGTALDIAGQGRANPTSLIEALKLAQTMGEARRA" gene 986040..986891 /gene="ksgA" /locus_tag="RTM1035_04840" CDS 986040..986891 /gene="ksgA" /locus_tag="RTM1035_04840" /EC_number="2.1.1.-" /note="COG0030 Dimethyladenosine transferase (rRNA methylation)" /codon_start=1 /transl_table=11 /product="dimethyladenosine transferase" /protein_id="jcventer:1101493006647_RTM1035_04840" /db_xref="CDD:30380" /translation="MRALEDLPPLAKVIAAHGLSARKSLGQNFLLDLNLTSKIARQAG DLGDCDVLEIGPGPGGLTRGLLMEGARHVLAIEKDSRCLPALQEIADAAPGRLTVLNA DALDLDPLAHLTPPIRVVSNLPYNVGTELLIRWLTPPEWPPFWQSLTLMFQREVAERI VAQPGGKAYGRLALLAQWRAVPRIMMHLPPGAFTPPPKVSSAVVHLTALPEPRYPADP KILERVVARAFNQRRKMLRAALKGAAPDIEDRLLSAGIKPTDRAETVSLEQFCALARR MPGGVEA" gene 987057..988067 /locus_tag="RTM1035_04845" CDS 987057..988067 /locus_tag="RTM1035_04845" /note="COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase complex, E1 component, alpha subunit" /protein_id="jcventer:1101493006647_RTM1035_04845" /db_xref="CDD:31269" /translation="MVARKSTKKSNVSAEDLKQYYRDMLLIRRFEEKAGQLYGMGLIG GFCHLYIGQEAVVVGLEAAAEEGDRRITTYRDHGHMLACGMDPNGVMAELTGREGGYS RGKGGSMHMFSTEKRFYGGHGIVGANVPLGAGLAFADKYLGNDRVTFTYFGDGAANQG QVYETFNMAALWQLPVIFVIENNQYAMGTSQKRSTSSPDIYTRGQAFGIPGEAVDGMD VLAVKEAGDKAVAHCRSGAGPYILEIKTYRYRGHSMSDPAKYRTREEVQKMREEKDAI EHVRDLLVSGGHATEEDLKAIDKEIKDVVNASAEFAKESPEPALDELWTDIIADAAPQ NA" gene 988083..989447 /locus_tag="RTM1035_04850" CDS 988083..989447 /locus_tag="RTM1035_04850" /EC_number="1.2.4.1" /note="COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase subunit beta" /protein_id="jcventer:1101493006647_RTM1035_04850" /db_xref="CDD:30372" /translation="MATEILMPALSPTMEEGTLAKWLVKEGDTVKAGDILAEIETDKA TMEFEAVDEGVMGKILIAEGSEGVKVNTPIAVMLEDGESAEDVASAPAAKAPEAAPAP KAAPATAKAPEAPKANTSPDWPEGTEMQTMTVREALNTAMAEEMRRDDTVFVMGEEVA EYQGAYKITQNLLEEFGAKRVIDTPITEHGFAGIGVGASWGGLRPIVEFMTWNFAMQA IDQIINSAAKTLYMSGGQMGSPIVFRGPNGAAARVGAQHSQDYAAWYAQVPGLRVVQP YSAADAKGLLKTAIRDPNPVVFLENEILYGRSFEVPKLDDFTIPFGKAKIWREGTDVT IVSFGIGMTYALEAAEKLAEDGISAEVIDLRTLRPMDTDTVIASVMKTNRCVTVEEGW PVASIGNHISAVLMQKAFDYLDAPVINCTGKDVPMPYAANLEKLALTSTQEVIDAVRQ VTYR" gene 989461..990768 /locus_tag="RTM1035_04855" CDS 989461..990768 /locus_tag="RTM1035_04855" /note="COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes" /codon_start=1 /transl_table=11 /product="branched-chain alpha-keto acid dehydrogenase E2 subunit" /protein_id="jcventer:1101493006647_RTM1035_04855" /db_xref="CDD:30854" /translation="MATEILMPALSPTMEEGTLAKWLVKEGDTVSAGDLLAEIETDKA TMEFEAVEEGVVGKILVAEGTEGVKVNTPIAVMLDEGESAADISSAPAKAEAPAAKQA EATPQAEVAAKPAPAAPKTGDGDRIFASPLARRIAADKGIDLAGITGSGPHGRIVKAD VEGAKAGAAPVASAAEAPASKAATPAPAAAPSGPSSDAVVAMYQGRAYEEVKLDGMRK TIAARLTEAKQTVPHFYLRREIRLDALMKFRAELNKQLEPRGVKLSVNDFIIKACALA LQAVPDANAVWAGDKVLRLKPSDVAVAVAIEGGLFTPVLKDAEMKSLSALSAEMKDLA KRARDRKLAPQEYQGGTFAISNLGMFGIENFDAVINPPHGAILAVGAGLKKPVVGKDG ELTVATVMSVTLSVDHRVIDGALGAELLTKIVENLENPMVMLA" gene complement(990810..991388) /locus_tag="RTM1035_04860" CDS complement(990810..991388) /locus_tag="RTM1035_04860" /note="COG3577 Predicted aspartyl protease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04860" /db_xref="CDD:33378" /translation="MQDFDFARLTYLMILGSVLLVWFVAQNRASLGKLAQQALIWGLI FVGALAAVGLWEDIRQTVRPMQSVVAGDRIEVPRAPDGHYYLTVEIEGVPVRFVVDTG ASQIVLSQSDAERIGLDTKSLAYLGRAYTANGEVRTATVRLESLAVGPVRHENLRAVV NQGEMGQSLLGMEYLQRFSSIEITGGRLVLTR" gene complement(991406..992032) /locus_tag="RTM1035_04865" CDS complement(991406..992032) /locus_tag="RTM1035_04865" /note="COG2095 Multiple antibiotic transporter" /codon_start=1 /transl_table=11 /product="membrane protein, MarC family" /protein_id="jcventer:1101493006647_RTM1035_04865" /db_xref="CDD:41932" /translation="MDTAFLITAFVTLFVIIDPIGMTPLFVALTQGMSTARRRAIAIR ACVTSALLLILFAALGEAVLGFIGISMPAFRIAGGLLLFLTALDMLFERRGQRRKGQA DAAEEDDSDDPSIFPIAIPLIAGPGSIATVILLAGQKPGAEGLLWVIGVMLSVIALVF VMFLTSGLLERALGKVGINVVTRLLGMLLAALAVQFVLDGLRGFGLAG" gene complement(992129..993976) /locus_tag="RTM1035_04870" CDS complement(992129..993976) /locus_tag="RTM1035_04870" /note="COG0488 ATPase components of ABC transporters with duplicated ATPase domains" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006647_RTM1035_04870" /db_xref="CDD:30834" /translation="MLHIDDITYSVAGRTLIESASASIPDGHKVGIVGRNGTGKTTLF RLIRGELALEGGSISLPSRARIGGVAQEVPGNEVSLVNTVLSYDTERAELMEESERST DGARIAEIQTRLADIDAWSAEARASSILKGLGFTDEEQLMPCSAFSGGWRMRVALAGV LFSQPDLLLLDEPTNYLDLEGALWLETYLARYPHTVLIISHDRGLLNRAVGSILHLED KKLTLYQGGYETFAETRAARLAAAASEAKKQDARRAHLQSFVDRFRAKASKAVQAQSR LKMIAKLKPITTPQEAALKRFTFPTPEELSPPILRIESGSVGYDGVPVLRRLNLRIDQ DDRIALLGRNGEGKSTLSKLLAGKLDPIEGQIHKASKLRVGYFAQHQVEELHLDETPI DHIRRLRPEEAPAKLRARLGGFGIGAEQAETLVGKLSGGQKARLSLMLATLDAPHMLI LDEPTNHLDIESREALVEALTAYSGAIILVSHDMHLLGLVADRLWLVRDGAVAPYEGD LESYRAMLLSGSDTEKPSEKPKEIKVKKPSRDAILKLRQDVKRCEERIAKLQDMESKV AAKLADPAIYDDIHGLTQWQKKYAEIEDGLSLAETLWMEALERLETAER" gene 994112..994534 /locus_tag="RTM1035_04875" CDS 994112..994534 /locus_tag="RTM1035_04875" /note="COG0105 Nucleoside diphosphate kinase" /codon_start=1 /transl_table=11 /product="nucleoside diphosphate kinase" /protein_id="jcventer:1101493006647_RTM1035_04875" /db_xref="CDD:47862" /translation="MAVERTLSIIKPDATKRNLTGKINAKFEDAGLRIVAQKRIQLTP EQAGVFYAVHKERPFYGELCEFMASGPVVVQVLEGEGAVAKNREVMGATNPADAAAGT IRAEFAESVGENSVHGSDAAETAAVEIAYFFSGLELVG" gene complement(994825..995874) /locus_tag="RTM1035_04880" CDS complement(994825..995874) /locus_tag="RTM1035_04880" /note="COG1064 Zn-dependent alcohol dehydrogenases" /codon_start=1 /transl_table=11 /product="alcohol dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_04880" /db_xref="CDD:31264" /translation="MRAALLTRYNTPTDITEVPDPDCPRDGAIIAVRACGVCRSDHHA WKGADPDVILPHVMGHEFAGEVLEIGPECRAFAVGDRVTAPFILGCGTCPDCRGGEPT ICNHQQVIGFTGWGAFAERLAIPRADFNLVRLPDTMGYAAAAGMGCRVTTAFRAVVDR AKTQPGEWLSVHGCGGVGLSAIMIGAAIGARVLAIDVNPEALRIAKSLGATATLDASQ SPDVGAAVRDVTDGGAHVSLDALGITDTFHNSLKSLRKMGRHVQIGMPLGRHATPELP LLELVYSRQITLHGTRGMGADRFAPLFAMISAGHLDPERLITQRIGLSGLNNALIAMD GFQGYGVTVVDQLSA" gene complement(996025..996909) /locus_tag="RTM1035_04885" CDS complement(996025..996909) /locus_tag="RTM1035_04885" /EC_number="6.2.1.5" /note="COG0074 Succinyl-CoA synthetase, alpha subunit" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase subunit alpha" /protein_id="jcventer:1101493006647_RTM1035_04885" /db_xref="CDD:30423" /translation="MMAIIIDKNSRVLVTGLTGRIGSFHTQDMINHGTNVVGGVTPGK GGTKHNGLPVFNTVKGAVAETGADLVICFVPPPFAADSIMEAADAGITTCVCIADGIP ASDMIKVKRYMRRYKAEKRMRLIGPNCAGIITPGQAFAGLMPPHIYKPGRVGIIGRSG TLGYEAASQMKERGIGVSTSVGIGGDPINGSSFRDILELFENDEGTDAVVMVGEIGGP QEAEAAAYIRDHMSKPVAAYIAGLSAPKGRRMGHAGAIVSAFGESAQEKVEILSEAGV TIVPTPSSFGEVVARMVA" gene complement(996906..998096) /gene="sucC" /locus_tag="RTM1035_04890" CDS complement(996906..998096) /gene="sucC" /locus_tag="RTM1035_04890" /EC_number="6.2.1.5" /note="COG0045 Succinyl-CoA synthetase, beta subunit" /codon_start=1 /transl_table=11 /product="succinyl-CoA synthetase subunit beta" /protein_id="jcventer:1101493006647_RTM1035_04890" /db_xref="CDD:30394" /translation="MDIHEFQAKELLKRFGVQVPRGGIAYSPEQAVYRASELSGDRWV VKAQIHSGARGKAGGVRICKNETEISEAAQWMLGRMLVTHQTGPQGKLVSRLYIEEAT SIAQEIYLAFVMDRKEERVVVVASGQGGMEIEEISAQEPESIIRSVVDPAVGMQAFQA REIAFSLGLDAALIPQAVKTIIGCYRMMEETDANMVEINPLVVTTSGEIMALDAKVSF DDNALFRRPEISELRDKSQEDSRETFASDRGLNYIGLTGEIGCIVNGAGLAMATLDMI KMAGGEPANFLDVGGGASPDRVLMSFNAVLNDRNVEAILVNIFAGINRCDWIAEGVIR AVRELNLTLPLVVRLSGTNVEEGRRLIADSGLPILTAETLAEAADLVVRAWSDTKNTV KGAA" gene complement(998139..999080) /locus_tag="RTM1035_04895" CDS complement(998139..999080) /locus_tag="RTM1035_04895" /note="COG2301 Citrate lyase beta subunit" /codon_start=1 /transl_table=11 /product="probable beta subunit of citrate lyase" /protein_id="jcventer:1101493006647_RTM1035_04895" /db_xref="CDD:32456" /translation="MSYTLHPLKKQRLQRSELAVPGSSPSMIDKAADSDVDYIFFDLE DAVAPPDKVQARANIIQALNDIDWKAKGKTISIRINGLDTHYMYRDVVEIVEQAGQHL DTILVPKVGVPADLYTVETMVSQIETAMGFTHQIGLEALIETALGMANVEAIASAPGR LEALHFGVADYAASNRARTVVIGGLNPDYPGDQWHFALSRMTVACRAYGLRAIDGPFG DFSDPDGYTLSAKRAATLGIEGKWAIHPSQIALANDVFSPPEAEVTRARRIIEELRKA EAQGKGAASLDGKMIDAASERMANNVISVADAIAAKG" gene complement(999093..1000301) /locus_tag="RTM1035_04900" CDS complement(999093..1000301) /locus_tag="RTM1035_04900" /note="COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase" /codon_start=1 /transl_table=11 /product="probable serine-glyoxylate aminotransferase" /protein_id="jcventer:1101493006647_RTM1035_04900" /db_xref="CDD:30424" /translation="MNGHSHLFIPGPTNVPEEVRRAMNIPMEDMRAPDFGDFILPLLS DLKKVFRLTHGRVFVYPTSGTGAWEAAISNTLNTGDRVLMSRFGQFSMLWVDMAERLG LDVDLCEVDWGKGVPVEDYAAKLTADKEHKIKAVFATHNETATGVTSNIAAIRAAMDA ANHPALLFVDGVSSIGSIEFEMEDWGVDLAVAGSQKGFMLPAGLGLLGVSDKALAAHE HAKMPRCYFSFADMIKLNDTGYFPYTPATQLLRGLRCSLDMLLAAGMESVWDRHHRLA SGVRAAIAEWQGCRLVAHGPEWHSDTVSAIYAPEGVDARDVIATAYHKYQTSLGSGLA KLAGRAFRIGHLGSLNPVMLCGAISAAEMALRDAGAVIEPGCGIAAAQEHFRASTPTM QVRVAPARAA" gene 1000529..1001170 /locus_tag="RTM1035_04905" CDS 1000529..1001170 /locus_tag="RTM1035_04905" /note="COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /codon_start=1 /transl_table=11 /product="nitrate/nitrite regulatory protein" /protein_id="jcventer:1101493006647_RTM1035_04905" /db_xref="CDD:32379" /translation="MIDATVQDAALELPEVIVADRQAIVCQGLGSLVAQIAAVRLGPF ATDLASLRKALGERPGRVVLVLGVRLADADLGRVLDMLRRDHPRVMVVVVAEEAEFAF IRTAVKAGAHSVCMMGQVLSSLPRVLGHLVEGHSILPAEILKRLMGEQGDSLTRREHE ILGLLVDGLTNFQISARLGLSENTVKYYLKAIYQKLDVNSRGGAIAKYVAGTY" gene complement(1001256..1002740) /locus_tag="RTM1035_04910" CDS complement(1001256..1002740) /locus_tag="RTM1035_04910" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical ABC transporter, periplasmic solute-binding protein, family 5" /protein_id="jcventer:1101493006647_RTM1035_04910" /db_xref="CDD:31090" /translation="MSMRPILLSILCLLLAAPAGAAPTGTFRHAHNVGFGAHSSLDPA SQGRVLQIIEKIQSRLVRPGPGGKPAPDLATSWTPNSDGTVWSFQIRDGVRFHDGSAL DAGDVVYSIKRVIDPDFGSPARAAVKMITHIATTGPLSVELRLDAPFADLPLQLMDPR LRIIPEGSGDTIHHSGIGTGPFKVEKFDPDGITTLVANEDYWEGPPALARIEVIGVPD AQARLQAFLGGQLDMERGIAPMMRRALDKSLRYQLLEIPTGNWMGLAFRTDVPPFDDP RVREALHLTVDRDEMLQLALDGGGVISCDTPVAPNDQYRAEMECPANPERARQLLTEA GYPDGVDVDVHVSALDPSWPVIGVAFQEQAARAGIRVNLINAAADGYWSNVWMKKDAF STSWGERPADQALNEAFHSTAKWNETFYKNSKFDQLLETARAELDFKRRRALYIEAQE YLAMNSGTIIPFHVTQLVVLSNRVTHFDPVPNDALRWHLVTVVD" gene 1002939..1003012 /locus_tag="RTM1035_t05774" tRNA 1002939..1003012 /locus_tag="RTM1035_t05774" /product="tRNA-Asp" gene complement(1003067..1004401) /locus_tag="RTM1035_04915" CDS complement(1003067..1004401) /locus_tag="RTM1035_04915" /note="COG4886 Leucine-rich repeat (LRR) protein" /codon_start=1 /transl_table=11 /product="leucine rich repeat protein" /protein_id="jcventer:1101493006647_RTM1035_04915" /db_xref="CDD:34495" /translation="MSDADKAYEAAQAKIEEARKAGKTQIWFDVPECFALRHIPTEIA DFTVLTHVGFDNTCITDLSPLSPLTGLQYLSLNQTGVTDISPLSPLIRLQNLYLTKTG VTDLAPLSPLTGLQFLSLSETGVTNLAPISRLIELKRLDLGKTGIKDVHPLKSLTNLQ MLWLNETTVEDINPLETLTSLQILSLNSTKVSDLRPLGDQKNTRKNRLMGVAYRNTPA TACDADLALLSEIENPEVRAFKTRAYLRSLPPWPEPYTPRATPDGSPPQPIGGGADNV LLPKVRTSEVQIRNLLRHALVTRVTAAQLSEQITDALRHVPATNGNELAPPLQMMAEI AEVLSALAQDDAIDAGRERDLRLRIHHLEAIIKRLTQALKDEQQARAAAEALAMKDGF WQSYRKSLGIAAGAGTIGVMGVGVPTAAVYFLGLDHPLVQAFLTVMGRLPKG" gene 1004511..1004584 /locus_tag="RTM1035_t05776" tRNA 1004511..1004584 /locus_tag="RTM1035_t05776" /product="tRNA-Asp" gene complement(1004625..1005683) /locus_tag="RTM1035_04920" CDS complement(1004625..1005683) /locus_tag="RTM1035_04920" /note="COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="bacterial luciferase family protein" /protein_id="jcventer:1101493006647_RTM1035_04920" /db_xref="CDD:32324" /translation="MKFHLAINLERLDPSADMKALRDHTLEMVQMAEAGGFEIAWAAE HHALEMTIAPNPFQILTWWGEHTSRIRLGVGVVNAAYWHPIRLAGEAAMLDLLSDGRL EFGIGSGAYQREFDRMMPGLAQPDSWRYMQESLPVVQNLWAGDYAHDGEYWQFPTATS CPKPVQSEVPIWVAARAPITFDYAVEHGCDIMSWPLTMPFSEAENYRARLDAAIAKNG GRYDGRWALMRHTAVYETEDDRQAALAALRRVLGQFGNLMMKRGEVVNGFPDPVPLAE LEGNARTDPAMLEENLAFGSPETVADKVRQYEALGVDAFIYYASMGLDMERQKRSLQL FIDKVMPQFAEQSIAAAE" gene complement(1005699..1007153) /locus_tag="RTM1035_04925" CDS complement(1005699..1007153) /locus_tag="RTM1035_04925" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase family protein" /protein_id="jcventer:1101493006647_RTM1035_04925" /db_xref="CDD:40271" /translation="MLIDGAWVDASDGGRFESFNPATGEIWATAPEATEADVIRAVEA AHRACYEGPWSRMTPTQRGQCLRRLGDLLAEQSESLGEIETRDSGKMFKETRWQAKYI AEFLQFYAGAADKITGETLPIDKPDMFVFTHREPLGVVAAIVPWNSQLFLTAVKLGPA LAAGNTLVLKTSEHAPAVILEFGRLIAQAGIPDGVVNIVTGHGDPCGRVLTSHPLVAR ISFTGGPNAARHVLTNSTQNFAQVSLELGGKSPFVVLDDADIESAVNGAVAGIFGASG QSCVAGSRLIVHADIADDFLTRLSAIASRIRIGDPMDEATQMGPLCTRAQLDHIEREV AHAQTQGARLICGGKRSAAGEMFFEPTILDCPSPDLRIVDTELFGPVLSVLRFKTEAE ALTLANGSEHGLAAGIFTRDSARALRMSRAVRAGIVWVNTYRAISPIAEFGGTKSSGY GRESGFQALYDYTRPKTVWMNMSDDPMANPFQMR" gene complement(1007182..1007658) /locus_tag="RTM1035_04930" CDS complement(1007182..1007658) /locus_tag="RTM1035_04930" /note="COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family" /codon_start=1 /transl_table=11 /product="flavin reductase-like, FMN-binding protein" /protein_id="jcventer:1101493006647_RTM1035_04930" /db_xref="CDD:41654" /translation="MRQVAASVTVVTTDGPMGRFGATVSAFASVSADPPSVLVCLHGQ SRIAQAVAANGRFCVNILPEGSTDIADRFAGRHDGWITDRFSGIDCYGTPGTAPLIEG ATGFACDMAQSVPSGSHLIVIGYVTSVFDAGTAPLAWRDGGYHRVVPKDAARCAAE" gene 1007946..1009604 /locus_tag="RTM1035_04935" CDS 1007946..1009604 /locus_tag="RTM1035_04935" /EC_number="4.1.1.49" /note="COG1866 Phosphoenolpyruvate carboxykinase (ATP)" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxykinase" /protein_id="jcventer:1101493006647_RTM1035_04935" /db_xref="CDD:29830" /translation="MRRRSGVGQGRAPTPKREKDMTAGRVNPRFRLEDQGILGLGKVH YNLMEPALVAASVQRGEGELGQGGTLLVSTGEFTGRSPKDKFTVRTPTTENTIWWDNN LAMSPEHFDQLHKDMLAYLAGREVFVQDLVAGADSEHSINVRLVNELAWHNLFIRHML RRPEREALDHFVADYTVINCPGFKADAARHGCRSETVIAVNIDAKLILIGNTEYAGEN KKSIFGLMNYLLPEKGVMPMHCSANHAKDDPEDAAVFFGLSGTGKTTLSADPNRTLLG DDEHGWSDTGTFNFEGGCYAKTIHLSAEAEPEIYATCSMFGTVIENMVYDAETRELDY EDSSLTENMRCAYPLNYIPNASATGLAGHPRNVVMLTCDAFGVLPPIARLTPAQAMYH FLSGFTAKMAGTERGLTEPQPVFSTCFGAPFMPRRPEVYGNLLRAKIESQGASCWLVN SGWTGGAYGTGSRMPIKATRALLTAALDGSLNGVEFRKDANFGFDVPVAVPGVADVLL DPRRTWHDPAAYDAQAAKLVRMFADNFAQYLPHVDEDLRAVALG" gene 1009807..1010604 /locus_tag="RTM1035_04940" CDS 1009807..1010604 /locus_tag="RTM1035_04940" /note="COG4105 DNA uptake lipoprotein" /codon_start=1 /transl_table=11 /product="Putative ComL lipoprotein" /protein_id="jcventer:1101493006647_RTM1035_04940" /db_xref="CDD:33862" /translation="MVIAGCGERESVERGNVNYENYTAQQIFERGEYDLAQRDPDLAA KSFAEVERLYPYSDLAKRAVIMQAFAHHQDKAYEESRAAAQRFIDFYPTDEDAAYAQY LLALSYYDQIDEVGRDQGLTFQALQSLREVIERYPDSEYANSAILKFDLAFDHLASKE MEIGRYYLKRDNFAAAANRFRVVVEDFQTTTHTAEALHRLVESYLSLGLVNEARTAGA ILGHNFQGTDWYEDSYKLLTGRGYTLEAAGDGWLQQIYRQTVQGRWI" gene 1010642..1012291 /locus_tag="RTM1035_04945" CDS 1010642..1012291 /locus_tag="RTM1035_04945" /note="COG0497 ATPase involved in DNA repair" /codon_start=1 /transl_table=11 /product="DNA repair protein RecN" /protein_id="jcventer:1101493006647_RTM1035_04945" /db_xref="CDD:30843" /translation="MLRALEIRDMLIIDRLDLVFQPGLNVLTGETGAGKSILLDSLGF VLGWRGRAELVRRGADQGEVVAEFELRPDHPARAVLREAGLPDEDVLILRRVNSADGR KTAWVNDRRVSGEVLRQLSDVLVELHGQQDDRGLLDPKAHRDLLDAYGDLGARREGVR AAWRDLGARRKARAAAEAAQAALRAEEEFLRHAVAELDALDPQPGEEVELDARRRMMQ GAERIREDIAKAAEALGLNGAEGAAGDALRWLEGAAERAEGQLDEAIAAIGRALVELD EAGRGVLRCLEALDFNPVELEAVEERLFAIRGLARKHGVLADDLAGFAEGLRGQLAAL DRGDADMRALVAAVAEAERVYGAEAEALSLARAEAAARLDRAVMAELAPLKMERAVFT TEIGRAEPGASGQDEVVFRVATNPGAPSGPLAKIASGGELSRFLLALKVCLTGTDSGV TMIFDEIDRGVGGATADAVGRRLAQLAAGGQVLVVTHSPQVAARGAHHWRVEKRVEGE ETLSTVRAMRGGDRVDEIARMLSGERITPEARAAAEALMEG" gene complement(1012377..1013753) /locus_tag="RTM1035_04950" CDS complement(1012377..1013753) /locus_tag="RTM1035_04950" /note="COG0277 FAD/FMN-containing dehydrogenases" /codon_start=1 /transl_table=11 /product="putative D-lactate dehydrogenase (cytochrome), FAD/FMN-containing oxidoreductase" /protein_id="jcventer:1101493006647_RTM1035_04950" /db_xref="CDD:30625" /translation="MDIARAIADLQSSLGQRITLSKSDLALHGQSESHFPPSPPDAVA YPETTAEVAEIVTLCARHRVPVVAWGTGTSLEGQAQAFRGGIVVDFSRMNAVLDVATA DMTARVQPGLTRQALNDALRATGLFFPVDPGANASLGGMASTRASGTTAVRYGTMRDN VLALEVVTAKGEVIRTGTGARKSSSGYDLTGLFVGAEGTLGLITELTLRLSGQPEAIS AAVCAFDSVADAVATVIDTIQCGIPIARIELMDTESVRAVNAHAKMTLPEKPHLLLEF HGTPASTAEQAESFGALAREHNGSDFDWATQTEARTALWAMRHNAYYAILGQRPGARA IVTDICVPISKLAEAIEETRADLDQAGVMGPILGHVGDGNFHAVLLIDPDNPDELTAA KAASDRMVTRALALGGTATGEHGIGVGKLDYMQREHGGGWALMGALKHALDPLNILNP GKLVPPRN" gene 1013840..1015528 /locus_tag="RTM1035_04955" CDS 1013840..1015528 /locus_tag="RTM1035_04955" /note="COG0038 Chloride channel protein EriC" /codon_start=1 /transl_table=11 /product="Cl- channel, voltage gated" /protein_id="jcventer:1101493006647_RTM1035_04955" /db_xref="CDD:30387" /translation="MQAEEPSFWGQLRRSMGDSLREGWGVLRKRGPSQFQFWLIALGI GIAAGFAALLFRKGITALQQLVYGTEDVARLHSFAEHLPWYWILMLPIAGGLVVGLIL HRFTPDGRVRSVADVIEGAALYEGRVERREGLASAAASLITLGTGGSSGREGPVVHLA GVISSWVSERIHADGVTGRDLLGCAVAAAVSASFNAPIAGALFALEVVLRHFAVHAFA PIAIASVAGTVINRLEFGGVTEFSLPQASVLEFYAELPAFLILGLICGVVAAALMRAI FLAEDVAGHVQARMGLPRWLRPVGAGALLGLMAIWFPHIIGVGYETTSAALTGKLLWH EAAVFAVLKVVAVAITIGGRMGGGVFSPSLMVGALTGLAFGHVATALLPEVSGAHTLY ALAGMGAVAAAVLGAPISTTLIVFELTGDWQTGLAVMVAVSTSTALGSRLVRRSFFLA QLMRRGIRLAAGPQDYLLGMFRVSKVMRAPDDARAADEAQCWSLIEQGVYLDVTATLE QAMPLFERANVPFVPVVTLSGGDQPPELSGALFHVDALKAYNRALAAVSEEEHS" gene complement(1015535..1015876) /locus_tag="RTM1035_04960" CDS complement(1015535..1015876) /locus_tag="RTM1035_04960" /note="COG2343 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_04960" /db_xref="CDD:44162" /translation="MARITIRKAEGTWTVRAGGAVLGESRNALELTEGDYPFVIYFPR ADIAMAFLDETEQFSHCPYKGDARYYSIITKSQTLENAAWSYESPKPEVAEIKDHIAF YATDSVTVERV" gene complement(1015941..1017671) /locus_tag="RTM1035_04965" CDS complement(1015941..1017671) /locus_tag="RTM1035_04965" /note="COG0006 Xaa-Pro aminopeptidase" /codon_start=1 /transl_table=11 /product="aminopeptidase P" /protein_id="jcventer:1101493006647_RTM1035_04965" /db_xref="CDD:29970" /translation="MAEAGLAGWLVPRADAHQGEYVAACDDRLAWLTGFTGSAGFCAV LPDVAGVFTDGRYRVQVRAQVAIPHFTPVDWPDTRLGPWLREHLPEGGTVGFDPWLYT PEQIDALTEALSGTAIHLKPHTNLIDSIWPDRPAPPQGAITPWPDTLAETSHAEKRAA LAETLRAAGQTAAVLTLTDSIAWLFNIRGRDIPRNPVAQGFAILRDDGRATLFTDPAK LDAAARAHLGSEITLSPPEAFETALAALPGPVRLDRAHVPLRVVQVLDATGVPHVWGA DPCILPKARKTPAEIAATRSAHLRDGAAMCEFLAWFDAQSPGTLTEIDVVRQLEQARA ATGQLLDISFDTIAGSGPNGALPHYRVTEASNRRLLDGDLLVLDSGGQYLDGTTDITR TLPIGTPGAAERAAFTRVLQGMIAISRLRFPRGLAGRDLDAIARTPLWLADQDYAHGT GHGVGVYLCVHEGPQRLSRLSEVPLEPGMILSNEPGYYREGAFGIRIENLIVVTALNP LPDGDGATQLGFETLTYTPLDTRLIDRDMLSIPERDWLNTYHRACRDKIGPLLSPQAR LWLEKVTQTS" gene complement(1017861..1019738) /locus_tag="RTM1035_04970" CDS complement(1017861..1019738) /locus_tag="RTM1035_04970" /note="COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase)" /codon_start=1 /transl_table=11 /product="cobalt chelatase, pCobT subunit" /protein_id="jcventer:1101493006647_RTM1035_04970" /db_xref="CDD:46104" /translation="MNKPTDNPADPFKKALANATKVMADDSELTVSYSVDPSGISGDA MRLPQVSRRMSREEVLLARGTADALALRHKFHDAGTHARYAPPGDMARDLYEAMETAR CEAVGARDMPGTATNIDAKIAQDANRLGFERITSTADAPLPAAAGYLIRHLATGRDMP AGAQNVMNLWRGFIEEQAGGTLGALQDILADQTAFAKFARRMIEDLGYGDQLGDDPDS MDDDQQDEAEESGEDQEEPDSTGQDDSDETEAEADPERSQDEQQDAAQAQVSMEELAD DEMQDETELPEGEAPLEPPAPAPISDADPHYAVYNTAFDEEIRAEDLADPVELERLRA YLDQQLEPLKGAVSRLANKLQRRLQAQQSRSWEFDREEGILDAGRLARVVANPTTPLS FKVEKDTEFRDTMVTLLLDNSGSMRGRPISIAAICADVLARTLERCSVKVEILGFTTR AWKGGQSREKWLAEGRPQLPGRLNDLRHIIYKSADAPMRRTRDNLGLMMKEGLLKENI DGEALEWAHRRMIQRKEARKILMVISDGAPVDDSTLSVNPANYLEKHLRDVIAMVERR KQVELLAIGIGHDVTRYYQRAVTITDADQLAGAMTEQLAALFDSDPRARARVMGIRRA G" gene complement(1019758..1020744) /locus_tag="RTM1035_04975" CDS complement(1019758..1020744) /locus_tag="RTM1035_04975" /note="COG5271 AAA ATPase containing von Willebrand factor type A (vWA) domain" /codon_start=1 /transl_table=11 /product="cobalt chelatase, CobS subunit" /protein_id="jcventer:1101493006647_RTM1035_04975" /db_xref="CDD:46273" /translation="MADGMMDINAKPTEEISVRETFGIDTDMIVKGFATRTERVPEFD STYKFDPDTTLAILAGFSHNRRVMIQGYHGTGKSTHIEQVSARLNWPCVRVNLDSHIS RIDLIGKDAIKLRDGVQVTEFHEGILPWALRNPTAIVFDEYDAGRADVMFVIQRVLEA DGKLTLLDQNEVISPNPYFRLFATANTVGLGDTTGLYHGTQQINQGQMDRWSLVATLN YLSHDAETAIVIAKNPLYNTAEGRKTISRMVTVADLSRTAFMNGELSTVMSPRTVIAW AQNATIFRNVGYAFRLTFLNKCDELERQTVAEFYQRCFDEELPESAANVKVR" gene complement(1020870..1021523) /locus_tag="RTM1035_04980" CDS complement(1020870..1021523) /locus_tag="RTM1035_04980" /note="COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /codon_start=1 /transl_table=11 /product="transcriptional regulator, Crp-Fnr family protein" /protein_id="jcventer:1101493006647_RTM1035_04980" /db_xref="CDD:31008" /translation="MPWVARAPGLPVLEPEARAILDRLTPMTAPAGTVLFHPGDTVKG FVIMLSGRVEVYLTGASGRELLLYAVEPGQSCVQSTLGLMGGDAYSGEAITRAPSELV LVPRDTFLHLMDLSDSFRHFVFAAFAQRLQSMMHLLDRVAFQRIETRLAQCLLDRAEN GILRATHAEIAVMIGSAREVVSRRLDALARRGIVTIERGMVHILDAETLSEIAQSTE" gene complement(1021523..1022395) /locus_tag="RTM1035_04985" CDS complement(1021523..1022395) /locus_tag="RTM1035_04985" /note="COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases" /codon_start=1 /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_04985" /db_xref="CDD:32267" /translation="MKIGFIGLGNMGAPMAANLAKAGHDVTGYDMAAVQIDGVTMAAS ATEAARGADVVITMLPNGSILRKVASEVIPAMTPGAVLLDCSTVDVASARDVAAEAQA AGLSALDAPVSGGVGGATAGTLTFMVGGDETGFNIARELFDIMGQKAVHCGPSGNGQA AKICNNMILGVTMIATCEAFALADKLGLDRQAMFDVVSTSSGYSWSMNAYCPAPGVGP KSPADNEYKPGFAADLMLKDLRLSQQAAEAADADTPMGRAACDLYAQFVEAEDGKGRD FSAMLPRFEKRGRG" gene complement(1022392..1023441) /locus_tag="RTM1035_04990" CDS complement(1022392..1023441) /locus_tag="RTM1035_04990" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="jcventer:1101493006647_RTM1035_04990" /db_xref="CDD:31227" /translation="MTADIHIRKEGRAGRITLTRPKALNALSYEMAMAIEAALEDWRT DDDVALILIDAEGDKAFCAGGDIQQLYDTGRAGDYDYGRRFWADEYRLNAKIAGYPKP YIAFMQGFVMGGGVGISCHGSHRITCESTQIAMPECGIGLVPDVGGSLILARAPGRLG EYLGTTGTRMRPDDAIYAGFADTYVPQLMWPTLIAKLIETGDPSLITDHAQTPPPGPL RALTPQITQHFSGETLRDILNALRAEDSDFARDTVKSLSRNSPLSMACTIEMIHRLRG PAADIGRALGLEYRFTYRAMEQGDFLEGIRAAIIDKDRKPHWKHGLDSLPGSAVAQML QPLGKDALTLEEAKT" gene complement(1023438..1024580) /locus_tag="RTM1035_04995" CDS complement(1023438..1024580) /locus_tag="RTM1035_04995" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_04995" /db_xref="CDD:29662" /translation="MDFALTEEQTAIFDMAHAFGQDRIAPHARDWERAGTIPKELWPE IAALGFGGLYVSEEAGGSGLTRLEATLVFEALSMACPSVAAFLSIHNMCAKMIDKFGS DAMKARVLPRALTMETVLSYCLTEPGSGSDAAALKTRAERTNAGYTLNGTKAFISGGG YSDAYIVMVRTGGDGPKGISTVYVEAGTEGLSYGGLEDKMGWRSQPTRQVQFDNCNIS AENLVGEDGKGFTYAMNGLDGGRLNIAACSLGAAQQGLTQTLAYMAERRAFGKPIDQF QALQFRLADMEIELQAARTFLRQAAWKLDNDAPDATKFCAMAKKFVTETGSRVVNQCL QLHGGYGYLADYGIEKLVRDLRVHEILEGTNEIMRLIVARQMLAGQ" gene complement(1024721..1025089) /locus_tag="RTM1035_05000" CDS complement(1024721..1025089) /locus_tag="RTM1035_05000" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05000" /translation="MAIRDCVSFLWDYPIHADRITLPASAPGARRHRRNPLHIPALPE PHVDEPVQSGAGVDEGVEGRFAFAVALWLAGADRAAALEAAESTSSHPFSPKQPFASP KHNVGFGPDVTVAIFKNRLL" gene complement(1025076..1025597) /locus_tag="RTM1035_05005" CDS complement(1025076..1025597) /locus_tag="RTM1035_05005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05005" /translation="MNQDEVARARITSDDRGTEAINNQSATTFLESKIEPLKVNRDSH YAACESLQRTHTWLGVVVVALSTISLGFTFGGGELLGDLENYFLGGTSVAVGILAGIQ TFSNFSGRASEHQGAAVAYGALLRELEFRVSGAISEGDNLNQLPKLMDRWLKISEMAP LTKSSLRRKNGDP" gene complement(1025594..1027993) /locus_tag="RTM1035_05010" CDS complement(1025594..1027993) /locus_tag="RTM1035_05010" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05010" /db_xref="CDD:29374" /translation="MLAQRVSLFLGSGVSLDSIGPDGEMFSAGRLREELVALNKLPSN ATLQKAYSALSDEQVEKHITQHYTCTEPGPTIVRLAKQPWRRIYSLNVDNCFESAFAS VVEAHEFSSSSTETINFDDGFTELLSDKRASIIHLHGCVDRAETGYVFSQNEYAKSIT RPNSWMLTLSQLIRTETFIVAGTSFDEIDVEYYLEQRSQKTIRGDIPPSVLIEPYPTK LTEMLCENHQFCLFEGTVLDFFSRIESIDDRLRMPWLDNESDGLSGLDLSESERLRFS ANFHRPPDDPQKIPNPGRFLLGAELDWSMLAANSDISREAFSEVRRDVVIAADDPQLK LILLVDEPGSGKTAFLKRLAFDLSRGSDEVFWYDGLGLELEPREIASILNGISGRIFV FVDNFADCLNSISLILGKIEKPDILFVCCERNYRLKYIQNAFTGFDYPTISDRLKLTR GEARALRAANEEHGLSTIPETSENFYLGQVVGGTMAEANCRIQNNFKTLDRIVQDLRS ECDQDEGFAYLLVALARFCYANGVRRSVLSTVSVPDAVEHLLSDQSSLPLSYSDLGNS FVVPKQAIVGDRFLDLTRRNWHRQLFEAFLELAKSVAPRVNAKTIKHKTPEAQLLGRL MDYDNNVRDYIDEYAEEYYAGLKPMCDWNARYWEQLALLKLDRFYSSPEDSLLLEESI QHARSAISAEVHPFSLSTLAKVLFQAMEKSQKNRDQYFSEAWQNVVDANVRESRWSNR GATLFTIAFGGVLKFLEMGGQLSGEQSEYLRDMIAETRTLKIADKRLIGVRSKLEEAL G" gene complement(1028436..1029545) /locus_tag="RTM1035_05015" CDS complement(1028436..1029545) /locus_tag="RTM1035_05015" /note="COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05015" /db_xref="CDD:32537" /translation="MKLAIHHASPIPDTYRAARVSSLFNVEGDADFRIEVEADLLARP WQIGLIVGPSGSGKSSLARAAFGAQLDPRPWPEGALIDAIDPEGEFDAVAAALSAVGL GTVPSWLRPFRHLSTGEQFRAELARILAERPSFAILDEFTSTIDRRVAQIGAAAFAKA WRRGTGQFVAVTCHEDVVSWLQPDWVIDTRRAEFRWRRLRRAPRIAMDIHQTDGSFWP AFEPHHYLKLPRMIAANYYVGFVDGAPVAHLAVSTRPGLVEGRACRLVVMPEWQGAGL GLRFLNEVCALWRRGVNRYDKPMPTLFHTSHPGLAAALRRDPLWAQVSAILYAESKER SMKTLAAARARKGLKPAGTGYGGHFRAVQGFRYVE" gene complement(1029542..1029724) /locus_tag="RTM1035_05020" CDS complement(1029542..1029724) /locus_tag="RTM1035_05020" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05020" /translation="MARSSTLPKPELPPGAPGLPKGTRYRRQYGVIVLLEDEAAQVDA FGRLRRQGFKCRVVVT" gene complement(1030372..1030734) /locus_tag="RTM1035_05025" CDS complement(1030372..1030734) /locus_tag="RTM1035_05025" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05025" /translation="MPEFRQNTPRARVLREEAVRAEAARRLAVVAGAYTPEERETWPI QIAEAEAYLADPTASVPMLTALGVPRGLEVSQMAMRVLTLRDEMKVAVGAILAAQAAL LAMDPVPPDYAADRWWPL" gene complement(1030727..1031140) /locus_tag="RTM1035_05030" CDS complement(1030727..1031140) /locus_tag="RTM1035_05030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05030" /translation="MNMRYSGLTYDPATGMITGRMEADVATVMANVGPERGFLAGTLA DPATHYVATDPIRTASRPEVPVPGAVQPVGWTYTLSDLPAGSLVTVRNEAGDELMITD LSEPLTLLDAGLYHLAVAPPFPWVGFGIEVELRDA" gene complement(1031137..1034934) /locus_tag="RTM1035_05035" CDS complement(1031137..1034934) /locus_tag="RTM1035_05035" /note="COG4733 Phage-related protein, tail component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05035" /db_xref="CDD:34348" /translation="MRLLAWVTAFLLASAAPASAGPVAAAVAAVFAGITVKAVALFAL RLFAGIGLSILQQRRARRGRNTAFGLQVTATTRGELESETTIVGLYATKGHLIYHNSH GPNNKYYQTVIELGGLPGAAFSRVMVDSVYSELGEEAHPDYGFPLIAKRDLGRDYAWI KVYDGTQTAADPMLVANYAEDPETPWTEAHIGRGIPYAILTMEVSSKVWPNGAPEQRY EENGVPYYDLRRDSTAGGTGPHRWNDPTTWEPSRNPVVQIYNILRGIDLYDGSIWGGE AEAEDLPGWNWVPAMNACDVDLGERRKYEAGYEIKFAEDTPGEIIDELLAACNGQIAE FGGFFYIQVDAPDIPVASITDDDLLVTDAATKDPFPELLEIFNRVTAKYVSPGALWNG VPLNQIRNAGWEAEDGIARNFELDLPAVYNPGQAGQLAQAMLNDHRRWRRHAWPLPPD YSGLRPLNTVSVTSAWNDYANKLFEVTEIVLDLHRLTVVASLRERDPEDFEIDGAYEI PDRSSILPRPVPTDAGLPFFDAAAHIVTNAEGTRAHAAVDVFWDASGIAETIKGIAIE CQKRDTQEEVWSGTVLDVERGLATIQPVPALTDLRVRAKALYDNRRGLWSAWIWVTTD DVRLSGADLDPALTTVTVPTGLALATVLVADALSGVSAVWGAVANAVSYEVGVTTGGV ETIFPAGGTAWSRDGVPGTVFSIRVRAVSAIGTKSAWSAPVGITAAVDTIPPAVPSGL AAVGLFEAIWLKWTANTESDVSRYEIVERVSTTGPGVSTVPTYITTTPQFISQDLTSG ETLNYWVRAVDTSGNKSGWSARVTATARATGDVITQETLQGLIDATSFAAGLEPITVV ASLPAVKSTELVAFGGKIYRWNGTAYVASVASTDVVGQFTAASIAAGAIGADQLAAKS VRAGAMAIGSFDNLNFDADFEDPSAWSTPGLGTLSWQASNSSTSWGSSNLARLGGLGT NFTVSTSRFIFDLDLAGESIFFSYFARIISGTGTVYADLQLSKNPTFTGTANVDYTFR NIGAVTTTSITKLEGVITVPPGYRYARFRLIKGNNETTDCFIGGLYARRMNAGKLTVD GSLQARHIDVNDLVVAGLATVNTAYINSANIIDLNAEKLVAGSITTPKINGRAITDPS TFFENYGGGTKTPATAPSWNNATSFSVSVPDSGSILMIDCHVNWLLNGGSTVAPWGLR LLLNGTPFDSMGGSLFQEIVPFRRAMAVGTGTQTVVLQCQRGSSASFQIQNIHSVATI LKR" gene complement(1034931..1035332) /locus_tag="RTM1035_05040" CDS complement(1034931..1035332) /locus_tag="RTM1035_05040" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05040" /translation="MMTREHTLRQFLDARRAEPFRPSLSDCAMFAADWIVELTGSDPA APWRGRYNSLDEGRALLARDGFASPAEVLASILVKNAGWMQAQTGDVAVLIEADEEAM GIVGGGHIHVLRPMRGLGAVPLDRAIRIYRP" gene complement(1035329..1035985) /locus_tag="RTM1035_05045" CDS complement(1035329..1035985) /locus_tag="RTM1035_05045" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05045" /translation="MSFDLAQTDQFDERNGTDAHILVLIEPRDRVTGEIVPMGLWTGD DHQTFAVDGETHLFLGAGNVIEVPPIRAGIGLEVRRHRVILPPMTDAAKLALQVYQAA QARVRVWSQPLDIYTGAPLGTPHRVIKGRLETAPETLAKLGDQSRTELVISSATRPLT FRQPLFKSDAAQRLRDPSDRFREHAASIADRPIPWGQETVVTEQPPPFIRENDPNDRK " gene complement(1035982..1036656) /locus_tag="RTM1035_05050" CDS complement(1035982..1036656) /locus_tag="RTM1035_05050" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05050" /translation="MMAVQDWPLPVSGFFDLLGIEEATFFLSGESTNSVTAGGEVIVH RRGTRLWQGEVVLGKSEPEAIAAQDTLIESLLEPGASFMVYDRRQFAPQDPAYPAGVN WAAQPVTIKSLIPGNRELSLQGLPPNFTLRRGQKIGFQYLANPVRFAVHRIMNATVTA DSTGATAPFEVTPFLRPGVVVGASVILDRPQLRAKLLSFKPGPGRSSLTQGGSFTWQQ TLGGGV" gene complement(1036653..1039433) /locus_tag="RTM1035_05055" CDS complement(1036653..1039433) /locus_tag="RTM1035_05055" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="response regulator receiver domain/DnaJ domain protein" /protein_id="jcventer:1101493006647_RTM1035_05055" /translation="MDADQAKAELQATGTAAKGTARDIRALGNEASGIGQGFNILART TKSAQESMNVFVQEQDRLRTQFDPLFAASKRYETALEQLNAAQRVGALTSRQYDAALD SLNADFARYTGATRQLAGANRLAAGSMGNLVSQGNDVLVMLAAGQNPFQLAIQQGTQI TQVIGPLGAAGAFRALGGAVLSMLSPINLITIGALAATAALVNWFSSATGEGESFADT IEALETRIDSLRDKIAEASATRLELAERFGEGFVERAQDILDRIVEAEKRAAARETGE NIGGFLSETGVDFGRINRNRTLLPQSIDGGLEVAEGQALSTLASEFDLSGLFGRIRAG GRALVQDVLDDFATLEEAAQGTVEEQAAAVDALIESYTRAAQASGGLSETEEARLLTL DQMRARLAEVAELQKQDPAQSREDETLVRRLRLLTEAALARSKADDAARAELATMQEQ NALAQAIAQFGADSATATRLRAQFALDAKLEEIEAKDASDENKNALREAAQAAFEIAT SDISGGIRAAADEASRLAAEVRGAVDAVADLQAQGEVGLENARIRAEFRDDPVGRAGA LAGARFDRETAVIRGEASGDLATVDALNARRDAVIELARETARLNELARPVRSTGGAR AGSTNETLREQQALDRLIESKRREIEALRESDPVQRELIRLRERLTAATPKQREEIEK LVEAHEAERVAMERKEEFGRAVDDVLLEAESLRDVWEGIGDMIIRAAKEALILGSGPL GGLFGGSGLLSGIFGGGGGLGDLFDLFSGGSLLSFAHGGLPAAALPGFATGGDPLVTR PGILLGAGTGRGDKIPAFVSAGEFIMTAEATARNRAVLEAMNAGAIIPGFAGGGLPLP AQAGGTAGAAGSSGAQGNGVTRLRIEPSELFRVVAEERARDVAIEVVDDFSAQQLPGR VEAIRRDPLGRG" gene complement(1039465..1039659) /locus_tag="RTM1035_05060" CDS complement(1039465..1039659) /locus_tag="RTM1035_05060" /note="COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05060" /translation="MRAFLAVCNQWRTVSAGLAGFRVVGLDYTAARAGLRMSGVRITP ELWAEVQVIEGAAVAAMRES" gene complement(1039818..1040147) /locus_tag="RTM1035_05065" CDS complement(1039818..1040147) /locus_tag="RTM1035_05065" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05065" /translation="MFKIDQTPTFTHRVEIKVPSDGGHEVQDMQVTFRVLPDAEVEGF DMRTARGEREFLGAVVQDFDDVEDEQGKKLPFSHALRDRLIGLAYVRVAMINAYYAAL MGKRVKN" gene complement(1040197..1041132) /locus_tag="RTM1035_05070" CDS complement(1040197..1041132) /locus_tag="RTM1035_05070" /codon_start=1 /transl_table=11 /product="putative orphan protein" /protein_id="jcventer:1101493006647_RTM1035_05070" /translation="MSLLWRRKVLLAKLETTYGTDAAPTGGDAILANDVRLSPMQGQD LDRNLDTPHGGPTGTIPVDLHRTISFKVELAGSGTAGTAPRWGCLLRACGCAETVTAA TSVVYNRVYSSLESVTLHLNIGGTLYAMVGVRGTAAFDVSASGIPYIEFEFTALYVAP ADVVQPTPDFSGIPDPLAASTTNTPVFTIGGTALVMRNFKLTLANRIEPQFLIGEEEV ILDGHENTIEARVRAVALATFDPFVMAATQAKVPVEIEHGKTVGNIVNIAAPNAQMQR PEGLEDGQGRKEWPLRLVPLPTTSTAADQWVMTLT" gene complement(1041129..1041254) /locus_tag="RTM1035_05075" CDS complement(1041129..1041254) /locus_tag="RTM1035_05075" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05075" /translation="MTNLPTSGGSYTRDDKGALKRAEAALKPTPAPKPEKKDADK" gene complement(1041251..1041685) /locus_tag="RTM1035_05080" CDS complement(1041251..1041685) /locus_tag="RTM1035_05080" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05080" /translation="MTINDIMTRIEAQVPELAGRIDGGRAFVDLIRSKKLPAQSVAAY VFPSGIQGSRPDAASGVFSQMLTHRTSVVIFAQSFDRTGAASLDKIDQFLMRVVRALA GWAPGDEVGVFRFERGHLVSSGAGVLAYQLDFSIDDQLRIFS" gene complement(1041682..1042179) /locus_tag="RTM1035_05085" CDS complement(1041682..1042179) /locus_tag="RTM1035_05085" /note="COG5005 Mu-like prophage protein gpG" /codon_start=1 /transl_table=11 /product="phage virion morphogenesis (putative tail completion) protein" /protein_id="jcventer:1101493006647_RTM1035_05085" /db_xref="CDD:34610" /translation="MVTLTVSLDSLDFDSAVANGLRQLSDLTPLMRRIGTVLETSVSE RFEKSEGPGGIVWPISHRARESGGKTLVDSTRLRDSIVTEADSFSARIGTNVPYAATH QFGAFIEPTGTDAAAKLAFTLPNGQFIMVDQVEIPARPFLGFDDKDETNIVDTVETFL REVFA" gene complement(1042181..1042582) /locus_tag="RTM1035_05090" CDS complement(1042181..1042582) /locus_tag="RTM1035_05090" /note="COG4387 Mu-like prophage protein gp36" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05090" /db_xref="CDD:46914" /translation="MIDRYGEGFLAEVTARDAAPGVVDMGVLQVAIDDAVSVTESYVA GLYNADTPPRALTMHAASIAWHRLLGARAAAYDGAKEGYDAALNFLREVRRGEASLGD ETPADTGPGNPQLPQISAPQATFSRDSLKGF" gene complement(1042673..1043029) /locus_tag="RTM1035_05095" CDS complement(1042673..1043029) /locus_tag="RTM1035_05095" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05095" /translation="MSYLIKRTVIGASRLEEGSTHPAQEIGSAAQIARLLALGAIEET DGGADTAPPPVLDDALRAALTNAINALPDDAFDKSGKPRVKALQDAAPGLGDQITAGV RDAVWAEMQAAAGAGS" gene complement(1043026..1043985) /locus_tag="RTM1035_05100" CDS complement(1043026..1043985) /locus_tag="RTM1035_05100" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05100" /translation="MSTPTPFVVDPVLTAIAVNYRNPDISFIADQVMPRVPVMGMDFK WTYYPPEQMFTVPNTEVGRKGLVQQVEFTGEEKTSSVKDYGLDDVVPQRDIEAARSLR AAGNSAFDPEARAVEGLTHLIQLDREKRVAAMVQDAANYDADKKVVLSGAGQFSDPTS DPIGVISAALDATFIMRPNVAAMGRKAWTALSTHPDILKAINRTSGDKGRASREAVAE LFELSEILVGDSYINAARKGQTAAFEKVWGGNIALLHRNTQAGPDGTAPAWGWTAQFD GRVSGRFFDPKVGLKGATTLRVGEQLSEVIAAPATGYLIEDAA" gene complement(1044005..1044370) /locus_tag="RTM1035_05105" CDS complement(1044005..1044370) /locus_tag="RTM1035_05105" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05105" /translation="MANPGMFIKSYTAEAAVPGRRIVKFGAAGGILVAASATNLAIGI SDQLDAKPGDLQDVIMSGSAELELAGTVAAGVPIASDASGLGVAAAAGAGNIAIGYAL QAGVAGDIIDVAIARHSVT" gene complement(1044363..1045448) /locus_tag="RTM1035_05110" CDS complement(1044363..1045448) /locus_tag="RTM1035_05110" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05110" /translation="MTKPLHIFRAGRHTAQSGQSFEFSEAEVEGIATAYDPALHEAPI VVGHPRTDAPAYGWVKRLRAEGAELFAEPDQVEPAFAEMVRAGRFKRISASFYPPQSA ANPTPGTYYLKHVGFLGAQPPAVKGLKAAEFAEDAETVTLEIAFSEEDAPAASFADTL KGAIAAVLSWARTPAGQEALRGAAGAPETDQTPFAEPQKGETDMSGKDTQTPEDRQAA LDARAAALEAKETAFAEALSKTRRDEDAALVEALVKDGRIAPGLKDEMAAFMESLDAQ DEVAFAEGKSASPRAWFRDLLSKQTKPLIDFSERAGGATPPLVKGSDDITAAAKRLIK DAEAEGRTLSFAEAARQIEETMESDNG" gene complement(1045746..1045964) /locus_tag="RTM1035_05115" CDS complement(1045746..1045964) /locus_tag="RTM1035_05115" /note="COG0443 Molecular chaperone" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05115" /translation="MVYLLTEPKGFSREDYEDALRDAEALPDDDPDKAEIVAARKKQL KIMFGPSPRRTPEERRALLRSFIDEPGS" gene complement(1045968..1047293) /locus_tag="RTM1035_05120" CDS complement(1045968..1047293) /locus_tag="RTM1035_05120" /note="COG2369 Uncharacterized protein, homolog of phage Mu protein gp30" /codon_start=1 /transl_table=11 /product="prophage MuSo2, F protein, putative" /protein_id="jcventer:1101493006647_RTM1035_05120" /db_xref="CDD:44147" /translation="MIDLQRLRPEDALYFFRSKGLAPPDARFDFRDVWRNEHASNFVV AKAMRTDVLETIRGALDRALANGGTLGSFMDDLEPELKRLGWWGSATERDPLTGELKN VQLGSPRRLRVIFDANMRAAHAAGKWARIQRTKNAFPFLRYVQIQRDTKREDHARYHD LILPVDHPAWLRIFPPNGWRCGCTVQQLSQGMIDRGGLKVTEDFELEERGVLNRRTGE IEPTALGVDPAWDSNAGHAWLDLGARHAGISTGLSAPAAATELGFAMRARLMGLGDGR EHLGAFNLRTGEEIDWSVGGADRVRLGPEVTQRLRDGQEIGLVHNHPSSAPLSPQDLA TMFERRVTSILAVGHDGSLYMAVRLSSARANAVGFQEVAGEMLDEIAPDLDRADRDHA IRLIVLEVLRAQGLILYSDSSGARALEVRQRVRGTVAEVVRAITEMLEE" gene complement(1047290..1048840) /locus_tag="RTM1035_05125" CDS complement(1047290..1048840) /locus_tag="RTM1035_05125" /note="COG4383 Mu-like prophage protein gp29" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05125" /db_xref="CDD:45966" /translation="MARKTSTMRLRSVRMRNPMELAGIQGGRDITRPWIGPLLEPTDP ILRTRGGGSFDIYKPILTDPQVKSVMTQRISAVTSREWEVVPGEDTAAGKRAADWLRE ELAALKFDRLTEKMLWGLFYGYSVAEQMYRRDGRLWGWEEIRVRDRVRFRFDENCGLR LLTLSNMLTGEEMPPEKFWVFSTGADHDDEPYGLGLAHWLYWPVWFKRNGLKLWLIAL DKFGMPTARGKYPAQATKEEQKTLLEAVMAIRSEAGIIIPDGMEIDLLAAPSGASSLD YQKLHDTMDAAISKIVLSQTMTTDNGSSRSQAEVHDDVGDAVKKSDADLVCQSFNEGP VARLCEFNFPGVAPPRVWRKMEDPEDTTAAVDRDEKLHRIGWKMTEDRVKETYGDGYE RTAPPDPTPPGENPPEAGFAEHRHESALDRLAAEIIAEGHAETAVEPLFADIAALLGS IAPGTTLEALRTRLDALAAAPSDGQAMTDLLTEASFAARLAGELGAVVDDSEAADGSN TLPGSVAP" gene complement(1048842..1050482) /locus_tag="RTM1035_05130" CDS complement(1048842..1050482) /locus_tag="RTM1035_05130" /note="COG4373 Mu-like prophage FluMu protein gp28" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05130" /db_xref="CDD:34082" /translation="MTAPVLTRDPDVLPEELPRGSEIPESLDPLADGILMEHQRSWLA DESDLKVCEKGRRTGITFAEMLGCALIAAAARGAGGQNCFYIGDTKDKGREAIGYVAH FARVIAGAAHPIEEFLFEDQQPDGTTKFISAYRVRFASGFRVEALSSNPANIRGLQGT VVIDEAAFHKDVREVIDAVNAMLIWGGKVRIISTHNGYLNAFNELIREARAGKNGFAV HRYTFGDAVANGLYKRVCMMQGKDWSAAAETAWEATVRRAYGAREAAMRQELDAEPAE MEGAALTRVQIEACMAKGIPFHRWTQPDSFKNADEPVRKATAEAWCKTHLEPVLKTLD PTRPHFMGEDFARSGDATDIIILEQSVDLTRRTKLIVELRNIPFDQQRDVLFWLLDRL PNFYKGAMDRTGNGAYLAEVAAQRYGERIVEVSFTRQWYELEMPPYIEAFSDRTIVLP AHEDVLRDHQALQYTNGIIRVPENFRFKGSDGLDRHGDSAIAGALAWYASNQDVVPME FQSTGPRTALTAQDFTSPLGGQRIGFARGRGGLDFGGF" gene complement(1050479..1051045) /locus_tag="RTM1035_05135" CDS complement(1050479..1051045) /locus_tag="RTM1035_05135" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05135" /translation="MPPPRKVDLLPKELRQWLQEELRNCGFSQYERIAEALNFRCEEE GLELRIGKSAIHSYGQEFREYALMQERAQDEIRTFLQEASLKDEADVTSALFQQLTTI QWRLQMMMSDATKMPDPRGMKDLTTALNNLIRSSSLRDGIIKAERARIAAEERANAVE ALDSARDELGLSSDVIGKLRREFLGVRA" gene complement(1051047..1051349) /locus_tag="RTM1035_05140" CDS complement(1051047..1051349) /locus_tag="RTM1035_05140" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05140" /translation="MSDYQATLRKHRRLAILRHLEQVSGYTANASILRDVLNGVGVGS TFDQVTTELAWLQEVGMVTVADHGDFVIAEATRRGIEVARGEAVHPEIQRPSARRL" gene complement(1051346..1051690) /locus_tag="RTM1035_05145" CDS complement(1051346..1051690) /locus_tag="RTM1035_05145" /note="COG0459 Chaperonin GroEL (HSP60 family)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05145" /translation="MMDWDLFWKGLGVIFPMLVALYTFIATRRKDLDQTLVEGHERMD RHEARISRLEQAVQNMPGKDDMHALQLELVRQTGSMEKMAAVMEGNAMITARLEAIVS RHEQHLLNGGKT" gene complement(1051687..1052259) /locus_tag="RTM1035_05150" CDS complement(1051687..1052259) /locus_tag="RTM1035_05150" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05150" /translation="MGLIKFLGALFGGGRNVIAETAEVFRPNAEKADMREAAFQQAAL AQMAAEFTGAPGLWGQFVDGLNRLPRPAMAFGCLFLFWSAMSDPIWFAERMTGLALVP EPLWALMGAIVAFYFGARELHKFRGTAMQKEAARIIAQAPQVARSITELRALRHDSPG AADTGPDAEVALAAVDVTDNPALDDWKRAA" gene complement(1052250..1052861) /locus_tag="RTM1035_05155" CDS complement(1052250..1052861) /locus_tag="RTM1035_05155" /note="COG3926 Putative secretion activating protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05155" /db_xref="CDD:45732" /translation="MQTVRTIAEEIVAREGGFVNDPADPGGATNFGVTIHTMRSLGLD LDRDGDVDVADVRLMTRARAVDIFMEHYFVRPRIAELPEALQASVFDMQVNAGSNAVK ILQRLVTDMGFPATVDGVVGPATLRAVQAAHDAAPAHIADAYAIARRNYYLRLADARP ASRKFARSRAGGKGGWIRRAEEFMSARYRMTDADFKERVASWG" gene complement(1052903..1053292) /locus_tag="RTM1035_05160" CDS complement(1052903..1053292) /locus_tag="RTM1035_05160" /note="COG0422 Thiamine biosynthesis protein ThiC" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05160" /translation="MENDPLWVDEMRADLGDALVERFLLRAGGMRLYVPGTLRTKSQL TALGGQDIARWISDRYAGDYVDVPSIRAQTRDGLRHALREAPDTPVNELANRFGVTAR RVLQVKAALAEEEEPPLLKVMRRASSE" gene complement(1053302..1053754) /locus_tag="RTM1035_05165" CDS complement(1053302..1053754) /locus_tag="RTM1035_05165" /note="COG4382 Mu-like prophage protein gp16" /codon_start=1 /transl_table=11 /product="putative phage regluatory protein" /protein_id="jcventer:1101493006647_RTM1035_05165" /db_xref="CDD:46143" /translation="MNRALQQLIFAACRQLGLDEDARRDLQVSVTGKTSLRDMNDGEL KLVVNRLKQAGFEDKPRNPRHKPAPRADLRMIHVLWRKLGQTGALRDPSRAGLNKFIR ARFGSVWGSVPADVDMLRAWEQIDAVIQALKTWGHRQSIDFDWEDHRR" gene complement(1053759..1053923) /locus_tag="RTM1035_05170" CDS complement(1053759..1053923) /locus_tag="RTM1035_05170" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05170" /translation="MLLRRDSTDPRWKRGQDAIRDAMRTVGSKTYVRCWHRAAHDAPW EPITIDLAKV" gene complement(1053929..1054408) /locus_tag="RTM1035_05175" CDS complement(1053929..1054408) /locus_tag="RTM1035_05175" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05175" /translation="MSEFTPLSIPDGRREIDGNIYMGDGRGGWQPLETIKPQHMLEDE TVRKIVSYGLPLSDQVKRFKAHTFDDIGAFEAILAQEYDAKIGGKKGNKTLMSVDQLY KVEVRVSDRIDFGPELQTAKQLFDECLNEWSAEARAELRGLVADAFTPTNRGRSTAR" gene complement(1054410..1054610) /locus_tag="RTM1035_05180" CDS complement(1054410..1054610) /locus_tag="RTM1035_05180" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05180" /translation="MNAPEITRWSPDEMLRLAASGVAKVDLLGPRGSTLCSMDEITAM AAVCALHGVGPRLLSTPPSTGE" gene complement(1054607..1054960) /locus_tag="RTM1035_05185" CDS complement(1054607..1054960) /locus_tag="RTM1035_05185" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05185" /translation="MMTRHDDSLDAPVTELAAQTVPASEIARRLGVTTQRVHSVLHYL RRHGAAFPPVRLGKPCGPQGAQLTRLNAETRAALSPHAIARGMETKALAVRILDVVIR DNLIDAILDDKETNP" gene complement(1054944..1055318) /locus_tag="RTM1035_05190" CDS complement(1054944..1055318) /locus_tag="RTM1035_05190" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05190" /translation="MSARDTAREFWGDAIPDWVAALARACDETSQNKVAVKMERSATL VSNILRNRYPADTSIVEDLVRGHFMREVVACPALGEIGKQVCRRWRGKAAQFENVNSL SVSMYRACNRCPIHKGADDDAA" gene complement(1055315..1055848) /locus_tag="RTM1035_05195" CDS complement(1055315..1055848) /locus_tag="RTM1035_05195" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05195" /translation="MSDLFDRLWTQVRELEEFDWEAVSRLGCSRETAVRYLRHWRDAG KIRVSRVTRNGKRWYAPSDRPLPGPQPVSGEATPEGNMWRAMRTLRHSFSPVDIAAHA NAGGVTVTVEKARAYCRQLLASEHLRVVEMAIPGRREALYRLVEDTGPRAPKPVRLAG ILDPNTGGFSPAKGGAA" gene complement(1055845..1056642) /locus_tag="RTM1035_05200" CDS complement(1055845..1056642) /locus_tag="RTM1035_05200" /note="COG2842 Uncharacterized ATPase, putative transposase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05200" /db_xref="CDD:31663" /translation="MTPSIAPLRNVAALIGLVERVQSRAFGLPGMATFYGPSGWGKTT AVTVAANEYQAHVVQVKDCWTPTYLAQAILREIGLPPQRGVAAMVDAIGAQLARNDRP LIIDDAQYLLRKRMIELARDIYESCQAPVILVGEEKLPQDLTRWENIHNRQLAWEPAL ACNLPDAEKLAPIYAAGIDVGADLLGAIVDASGGSIRRVAINLARAKELAMGRGRRLA DLELWGNRAFETGQPPAVRRVDDFRPVAPRAPEKIVPLPAEKKAGRA" gene complement(1056661..1058784) /locus_tag="RTM1035_05205" CDS complement(1056661..1058784) /locus_tag="RTM1035_05205" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase, putative" /protein_id="jcventer:1101493006647_RTM1035_05205" /db_xref="CDD:40748" /translation="MTGPSPSQEWWSAADLAEAGLPDLPGTKRKINQLAQKEGWTRHA GKVRRRKGAGGGIEYHWSLLPIRARMRLSADLVNAPAARPGKDEAWERFAAAGDKART EAEARLEAIGEVELLEGAGLTRSAGVREVARKQGRSEKSLWNYFGQVEGVALADRLAY LIDGRAVRRAPAQRGDIDPAFLALVRSDWLRLSQPSLTSCYVRAVRVWTSERRNSAVP PLHQVRRWIKANVSAPTETYLRKGEQALRRLYPAQVRSKAFMVPLECVQGDYHKFDVF VRWPGIDTPVRPQMMVWSDVYSGKLLAWRLSDTANSHTVQLVTGDLIRTYGIPQSVLI DNGREFAAKAMTGGTPTRFRFKVTDEDIPGLLPLLGVHVHWATPYSGQSKPIERAFRD LCDRVAKHPAFDGAYTGNKPDAKPEDYGTRAIPLDEFRLVLEDELAHHNARPGRRSEV AMGRSFNEVFNEGYARATIKRATDEQLRLWLLRAEGVRAKRSNGALKLYDTEYWSEWM YRIAGEKVVARFDADDLRAGLEVYDLAGRYLGHAACLEDAKFIDVDAARDHARKRGAW AKAQKAEAKAARELTAAEVAARVRAASGLAADEPLPEAQVHQLVTPHKAAPKRRRAQS VEEIEREAALEARVTRLAEHRARPVEVDEDDPKALFLRARALETAQAEGETLTQAQAD WLADYQQSSDYRAQLRMERRFGAQE" gene complement(1058781..1059635) /locus_tag="RTM1035_05210" CDS complement(1058781..1059635) /locus_tag="RTM1035_05210" /note="COG1475 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="ParB-like nuclease domain protein" /protein_id="jcventer:1101493006647_RTM1035_05210" /db_xref="CDD:47776" /translation="MIEHLSTVTELSVDAIIIEDRLRDVNTATLDGLKQSIEQSGLLQ NITVRRKRDGDYLLDGMHRLTAMREIGRQSIPVRLVRCNDAEARLIEIDANLAGAPLI PVDLAMFLAERKRAYEALHPEAKAATGADLVSKRWDTAELSSVVSFVASVQEQLDLSE RHIRNYVRAGSLLERPEIESLRKAPKQVGVYDLIDIGKIGEHDEREFVVKALVSGQAK KVSAARKAYRAARGEAPAPVSDRDQKLSRLLDAWDRAGKRERRAFLEERGAEVAALLG ELDQGDAE" gene complement(1059645..1059833) /locus_tag="RTM1035_05215" CDS complement(1059645..1059833) /locus_tag="RTM1035_05215" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05215" /translation="MIRRLAHEFCLRVRAGLCAARFLRPGCAQSACSGRGVFSVISDV LGVLALFAMLFVLASFGA" gene complement(1059830..1060042) /locus_tag="RTM1035_05220" CDS complement(1059830..1060042) /locus_tag="RTM1035_05220" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05220" /translation="MRISDLIPDAGQLQAEIATIPQAQRVALALQLVRDIDEPCCALP LMRLSRLAEDHHLSIRKEAFVRERAR" gene complement(1060191..1060895) /locus_tag="RTM1035_05225" CDS complement(1060191..1060895) /locus_tag="RTM1035_05225" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05225" /db_xref="CDD:47831" /translation="MGIKAFRMARGLSTDQLADLLGLRRGVIEQIEEATMPAPLNFLA HLRDVLGADLNKIIGVSVPLGRLKANMPGFVGQVTFGFMDKVGGEEAVRRIVKPVRGK LRRQSVQNWHEKRRVPFYAIRQILSYAAENGIALTHEDFKAQRLWPDGSTSWPEPVFP PSPSAKQEQDTGSSELSWPHKPAHIQGPAHRSDECPGVGSDATTCWLGNPEPPGPARS MSGASLGFRYMTGDLG" gene complement(1061075..1061335) /locus_tag="RTM1035_05230" CDS complement(1061075..1061335) /locus_tag="RTM1035_05230" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05230" /translation="MPEKVRTIQPGPVFYDVFLGYLRVIGTNLKDWCAPHGVTPTNAK SAATGGWNGVKARRLRQKMIDEVGEETFARLYADRMRREDAA" gene 1061432..1061905 /locus_tag="RTM1035_05235" CDS 1061432..1061905 /locus_tag="RTM1035_05235" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05235" /db_xref="CDD:28977" /translation="MAKKDFGQSLREWRVTQKLSQRELSAAIGVSRGYIGDIEAGRSE PSRNFLERLQERFGLRADYILYGEDDPVAADPPKSKHTQLDEMTLMICGEAVKKVYKE LGLKLPTKTHFEQAVWIYNELIARMENFYDGDEMEELLPHLRETLKTRLEGADKT" gene complement(1062253..1062852) /locus_tag="RTM1035_05240" CDS complement(1062253..1062852) /locus_tag="RTM1035_05240" /note="COG3621 Patatin" /codon_start=1 /transl_table=11 /product="Patatin" /protein_id="jcventer:1101493006647_RTM1035_05240" /db_xref="CDD:33420" /translation="MCVPAFDGTHSEVFVYKTPHHADYKFDRFEKMINIGLATSAAPT FFQPFKSGGYQLVDGGVWANNPIMLAVIEALTCFDVTPTQIDVLSIGCGDDPYFVSSS QIKFGGMWFWKDAIFAAMRLQSLAATNQARLLLGPPSVVRLSPPIYSPSIELDDWRRA VDQLPGDALSATEANAVRIKKMFFEGVADTFVPVPATAT" gene complement(1063146..1063775) /locus_tag="RTM1035_05245" CDS complement(1063146..1063775) /locus_tag="RTM1035_05245" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05245" /translation="MPLSVRDQDARMRAEFPGFKLTLDLGFMGVWEGSLTPICQTYTI RITYFARIFFKNYTLSNPAVSIVVLDPPIGPDPRGTGEPPQHVYRWEHPPAFPRLCVY DPQTDEWTRDKSIADVLMPMIIKWFVFHEDWVVDGVWRGRGRHPELSKNEDTCKPAKQ RLNPEDRARRDRSLNAAFHRLGRKTGVFGSYHWTAGGYVGFFPLQFSPS" gene complement(1063779..1065020) /locus_tag="RTM1035_05250" CDS complement(1063779..1065020) /locus_tag="RTM1035_05250" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05250" /translation="MSLDDPILRKIALFTPQDILLADVAVRIQLSPTEYVTATKHYEV MGEWIDRPGSPLQGMVDGFYAQGGFSTGSTIAGHDDRCDYDLDAMAVIKWDHGVDPEH ALATLHHAIAGEEGSRYFDKSERKTRCTQVQYTGMHLDVTPSVLLESMEPKTSFIFHS KPSDPAVPRQRLFANPFGLAEWFNARTRADIVFGSYFERESLKYARATALAKADTTPV PDQLPAYKKSRQVICLQLIKRWRNLVYDRRHPKLRLPPSVLLTYYVGLHTGGERSLLD ELTHQVNCIITTIESATALARLVYACNPTCEHDVLTDRWPGSLYDQQVFLDELREFAR KLDVLKRGVSLEEMRKILEELFGEKPARDAIAALRQQHVRDNDAGTGLYIPGRGAVPA LGSLAAPSSAKAIPFSTPFGD" gene 1065118..1065507 /locus_tag="RTM1035_05255" CDS 1065118..1065507 /locus_tag="RTM1035_05255" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="possible transcriptional regulator, XRE family protein" /protein_id="jcventer:1101493006647_RTM1035_05255" /db_xref="CDD:28977" /translation="MAKASSERDDTEMSNDETTDNLFGRRLRAARTERGLEQQQLAEK AGLPPSSISHFEKGARKPSFDNLRNLAKSLDVTTDYLLGRVDTMDRVESAQRLHRHLG NLTESEVNTVEGFIKMLKDGKLESSKK" gene 1065504..1066388 /locus_tag="RTM1035_05260" CDS 1065504..1066388 /locus_tag="RTM1035_05260" /note="COG2856 Predicted Zn peptidase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05260" /db_xref="CDD:32684" /translation="MSLMVPRLPLSEGAADKVLRELGITKLPIDPKEIAALKDIKVEA APATSKGFSGMLANWDTNFGIMYATHINSIGFQRFSIAHELGHYFIPGHMEQVLANGA HTSHAGFGSRDPYEQEADFFASALLMPSSLIKPIIARQDDGLGLVKAIAKECVTSLTA SAVRYARVSRSAVAVVLSEGGVIDFCLFSEVMKEAKVRWLRAGSPLPKGSLTHRFGAD WNNVASAREDSGQADLIDWFDCPKSHVVSEDVIGLGTYGKTLTVLYSARLTAEAEGLD EDDEDEKLEESWTPRFRR" gene complement(1066826..1067527) /locus_tag="RTM1035_05265" CDS complement(1066826..1067527) /locus_tag="RTM1035_05265" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05265" /translation="MIVASLFGKRLFWLLEPREHVVVSAFRRSRRLAFITIEIVAGIG ACFAFYEIFFARKTVDYASLSFDLCAPLSDKHTDFSEFLARNAEKFVVLDLDFTQRPL QCEIPGTSGWIAYLSPDQASVTLEVQSDEYGYQRVPNFELQGFTTVLTFQANQLGGHV LNNVYGEWAEDPGYIGISGAFFVKPSLGEGDLYFNLIPAPFDVQTDLISRCTRVANTQ SGWNLVKQYISECIL" gene complement(1068307..1069677) /locus_tag="RTM1035_05270" CDS complement(1068307..1069677) /locus_tag="RTM1035_05270" /note="COG0168 Trk-type K+ transport systems, membrane components" /codon_start=1 /transl_table=11 /product="K+ transporter Trk" /protein_id="jcventer:1101493006647_RTM1035_05270" /db_xref="CDD:30517" /translation="MRSERRAHTMKPLLHRATTALSHMPPPLILSVLYAVLIVLGAGA LKLPFAHSVPITWSDAIFTSTSAVTVTGLVVIDTGAHLTLFGQMVVAFLIQMGGLGLM TFAVLILGALGLPVGITGKLYLREDLNQSSVHQLSNLVLTILKVVVVCEVAGAMLLAL TFVPHYGFWPGIWESIFHSISAFNNAGFSTFPNGLVPYATDPVVNTVIPALFIVGGIG YVVLHDVFTQKSWQAWSLHTKIMLVGTAFLIPWSVGMFALLEWNNPGTLGQFDSITAR LAVSWFQGVTTRTAGFNTTDIGALHDSTSMMFISLMLIGGGPTSTAGGIKVTTFVVMI IATVAFFRRQQQLHAFGRSIALDQVLKVMALTAISLILVFVGVFLLTATHDGHFLDIS FEVASAFGTVGLSRGYTGELSEFGRAVIIAIMFLGRVGPLTLGFFLATRVAPRVRYPE GKVYLG" gene complement(1069667..1070335) /locus_tag="RTM1035_05275" CDS complement(1069667..1070335) /locus_tag="RTM1035_05275" /note="COG0569 K+ transport systems, NAD-binding component" /codon_start=1 /transl_table=11 /product="TrkA" /protein_id="jcventer:1101493006647_RTM1035_05275" /db_xref="CDD:30915" /translation="MLMAKESRSFAVIGLGAFGSAVATELTRFGNQVIGVDLDERRIT QLASTLSSAVILDTTDEMALKEAGIDQYDMALIAIGRDIQASILTTMNLKMLGIGTIW VKASNKTHHRILSKLGADRVILPEQEMGRHIAQMLNNPVVQDYVSLGNGFSVVNIVIP ARLSGRKMSSLDIGKTYDLRLLGLMRGTEFRPCDAPDLVLEEDDKLILLGKRPELRRF GDAL" gene 1070642..1070794 /locus_tag="RTM1035_05280" CDS 1070642..1070794 /locus_tag="RTM1035_05280" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05280" /translation="MAGVAIGLRRAVLRPGLPFGVIANTTAFLKVERAKTVFAAIRAA ISDLSK" gene 1070892..1071254 /locus_tag="RTM1035_05285" CDS 1070892..1071254 /locus_tag="RTM1035_05285" /note="COG3795 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05285" /db_xref="CDD:44850" /translation="MQFMLQFRETAEEWGKHKDPTQHAAYFGVWNSFIGALAQSGAMV GGNGLLPPDTATTLRVENGTRHIFDGPFADTKETLGGYVILDVPDLDAALEWAAKAPC VTAGSVEIRPVLPPPSNG" gene complement(1071251..1071421) /locus_tag="RTM1035_05290" CDS complement(1071251..1071421) /locus_tag="RTM1035_05290" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05290" /translation="MPCLWVRVFTTEAQQGKARKGSKAPVHVVLHAMRNGSLWVQGLL AAQAARPALRVH" gene 1071458..1071817 /locus_tag="RTM1035_05295" CDS 1071458..1071817 /locus_tag="RTM1035_05295" /note="COG3795 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05295" /db_xref="CDD:44850" /translation="MHYMMQFYESPEERRKPTDPAQAGAYWGSWQAYIGALAQSGAMV SGNVLRPPEAATTLRVENGTRHVVDGPFADTKEMLGGYVILDVPDLDAALEWAAKAPC VTGGSVEIRPVLPPPGA" gene 1071817..1073052 /locus_tag="RTM1035_05300" CDS 1071817..1073052 /locus_tag="RTM1035_05300" /note="COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain" /codon_start=1 /transl_table=11 /product="ECF-family sigma factor" /protein_id="jcventer:1101493006647_RTM1035_05300" /db_xref="CDD:34549" /translation="MEDACRDAAARATLAARDSYGKLLAILAARTRDVAAAEDALADA FAAAIAQWPKDGVPSNPVGWLLTVARRSAGHAAARRQTADRGAAMVQMLDDERKDPTS DGFGDDRLKLMFACTHPAIAVDAQAPLMLQTVLGLDAARIAASFLVAPTSMGQRLVRA KRRIRDAGIAFAIPEAEDIPARLSAVLSAIYAAYGTAWDDVAGADPRLAGLADEAIWL ARLTVQLVPDQPEALGLLAMMLHCEARRAARRGPDGAFIALRDQDVALWSRDMMAEAE AALRTAARLGQPGRFQTEAAIQSLHAQSRMTGERLHGPLMQLYNVLARFAPTTGVLVA RAVALAENGVPDAALSQLDAITGAETYQPWWAARARILWLYGQEEAARDAASRAAGLS SDPGIRRFLLSGGYRDGPR" gene 1073582..1074265 /locus_tag="RTM1035_05305" CDS 1073582..1074265 /locus_tag="RTM1035_05305" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05305" /db_xref="CDD:35179" /translation="MTKLAEIRTYALSKLGKLDKVTPYPADSLAALQGRVPGSMIDML HTLGLGTWGKGKWQTVEPQSYDGLLQQTLRGDPDFSAGDCTAFAILGFGDLTCWHRRF GIVNIRVLPNTLSAPSFYDNGPEDTEQAALMNFMSIHLTAGQYYDKYAGDGKGLFDRL VKVHGPLAPGQIFAPRLHPAIGGAVTVENFRPASAPEATALLHQMEPFVFMDHRKPRA VEVRMIGRQ" gene complement(1074427..1074993) /locus_tag="RTM1035_05310" CDS complement(1074427..1074993) /locus_tag="RTM1035_05310" /note="COG1376 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG" /protein_id="jcventer:1101493006647_RTM1035_05310" /db_xref="CDD:43654" /translation="MKPGLLTRRHAMATGLAALATPGILRAEPAADVTNRRNASAFIT RDWRDHFDSLGKGAILADIDSRALHYWGPDGETYALYPSSVPMTEDLTRRGYTQIVRK RVGPDWTPTQSMRERDPTLPAYMPPGPGNPLGTHALYLSWPAYLVHGTHDTRKIGRQS SSGCIGLYNEHIEELFAKVEVGTQVLLL" gene 1075226..1076086 /locus_tag="RTM1035_05315" CDS 1075226..1076086 /locus_tag="RTM1035_05315" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05315" /translation="MPEEHRVAVAVIHGMGSQGDRPQAANAVSFSRDLYTALRKRMGA ARFDTLVGWREIFWSDILQERQQSYMDRALKGQANWMGARDFVMHRLADAAAYRWEKG DHAYVYPQVHARVSNAIAHLEGVTGGRAPLIVLAHSLGGQIISNHIWDLQRKYTTAPT PFQRFETMAGMITFGCNIPVFTFSCKPDDVKAIERPGTAIPVGKRFNPWWVNLNSRND ILGMPLAEAGDGYAALADREELRDRWISAGNVLTAWNPLSHNAYWADSDVHGSVVAMI EKSMQIGPVG" gene complement(1076143..1077642) /locus_tag="RTM1035_05320" CDS complement(1076143..1077642) /locus_tag="RTM1035_05320" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="methylmalonate-semialdehyde dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_05320" /db_xref="CDD:40271" /translation="MQELTHYINGQHVKGTSGRFADVFNPATGEVQAKCPLASVEEMD AAVAAALAAQPAWAATNPQRRARVMMEFVRLLNRDMDKLAEALSREHGKTFPDAKGDI QRGLEVVEYCIGAPQMLKGEFTDGAGPGIDIYSMRQPLGVTAGITPFNFPAMIPMWMF APALACGNAFILKPSERDPSVPLMLAELMEEAGLPKGILQVVNGDKVAVDAIIDHEVI QSIGFVGSTPIAQYIYGRGCSNGKRVQCFGGAKNHMIIMPDADMDQAADALVGAGYGA AGERCMAISVAVPVGDETADRLIEKLVPRIEKLKVGPYTAGNDVDYGPVVTAEAKQRI LGLVESGIAQGAELVVDGRDFKLQGYEDGFFVGPHLFDRVTPDMDIYTQEIFGPVLAT VRAGSYEEALKLAMDHEYGNGTAIFTRDGDAARDFAARVNIGMVGINVPIPVPLAYHT FGGWKKSGFGDLNQHGPDSFKFYTRTKTVTARWPSGIKEGGEFNFKPMD" gene 1077747..1078643 /locus_tag="RTM1035_05325" CDS 1077747..1078643 /locus_tag="RTM1035_05325" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006647_RTM1035_05325" /db_xref="CDD:30928" /translation="MTPHWDDIRIFLAVARSESLSGAGRILRIDPATVGRRIARLEEE LGAPLFAKSPTGYVLSEAGQRLMGPALRAETAMQEATEEMAGQAGGLSGQIRIGAPDG CANFLLPQVCAAIGAENPDLEIQIVALPRVFNLTRREADMVIAVSPPTAGRLTVQKIT DYRLHLAATVRYLRSHPPIATLADLRAHRMVGYIPDMIFDKELDYLSEAGIERVSLAS NSVSVQLNWVRQGGGIGVLHDFSLPWARGLQKVLPDQFSLTRSFYLVRHADDRRLERQ NRFATALVERLRQEVQSLEART" gene 1078704..1079138 /locus_tag="RTM1035_05330" CDS 1078704..1079138 /locus_tag="RTM1035_05330" /note="COG0517 FOG: CBS domain" /codon_start=1 /transl_table=11 /product="CBS domain protein" /protein_id="jcventer:1101493006647_RTM1035_05330" /db_xref="CDD:32729" /translation="MLVQQILKSKGDSAVITISPQTKVSEAAQTLAERRIGGLVVSRD GETVEGIISERDIVRSLAVRGVVCMTETVSEMMTRNPVCCSRQDTSDAVLARMTDGRF RHMPVVEAGKLVGIVTIGDVVKARLEELAMEKTALEGMIMGY" gene 1079201..1079692 /locus_tag="RTM1035_05335" CDS 1079201..1079692 /locus_tag="RTM1035_05335" /note="COG0669 Phosphopantetheine adenylyltransferase" /codon_start=1 /transl_table=11 /product="Coenzyme A biosynthesis protein" /protein_id="jcventer:1101493006647_RTM1035_05335" /db_xref="CDD:28825" /translation="MRIGLYPGTFDPITLGHIDIIRRAAVLVDRLVLGVAINRDKGPL FSLEERVEMIEAECAKLSAQTGTEIVAHPFENLLINCAHDVGAQVIVRGLRAVADFEY EFQMVGMNRALDNSVETVFLMADANHQAIASKLVKEIARLGGDVTKFVTPPVREALLA KFS" gene complement(1079699..1080751) /locus_tag="RTM1035_05340" CDS complement(1079699..1080751) /locus_tag="RTM1035_05340" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_05340" /db_xref="CDD:30406" /translation="MPLKLAINGFGRIGRNVLRALLDTDRQDIEIVAINDLAPVETNA HLLEFDSVHGRFRGQITTTADTIDAGRGPMRVTGLRDPEALPWGDVDIVLECTGIFTD RDAAARHLKNGARRVLVSAPSAGADRTVVYGVNHADLTGKDVIVSNASCTTNCLAPLA KVLHESIGITRGFMTTIHSYTGDQPTLDTMHKDLYRARAAGLNIIPTTTGAARAVGLV LPALAGRLDGTAIRVPTPNVSVVDLTFEAARDTSVDEINAAVSGAANGALLGVLDVTS RPLVSSDFNHDPHSSIFATDQTRVMEGRLCRVLSWYDNEWGFSNRMLDVAAEMGRHLE TGRGPVPHHTRVMEPT" gene complement(1080843..1080986) /locus_tag="RTM1035_05345" CDS complement(1080843..1080986) /locus_tag="RTM1035_05345" /codon_start=1 /transl_table=11 /product="thiamine biosynthesis protein ThiC" /protein_id="jcventer:1101493006647_RTM1035_05345" /translation="MTNTIAIGLGGIVLVALGADVILNDSQSTLFLGRKLIDLIEYVA FWR" gene complement(1081140..1082942) /locus_tag="RTM1035_05350" CDS complement(1081140..1082942) /locus_tag="RTM1035_05350" /note="COG0422 Thiamine biosynthesis protein ThiC" /codon_start=1 /transl_table=11 /product="thiamine biosynthesis protein ThiC" /protein_id="jcventer:1101493006647_RTM1035_05350" /db_xref="CDD:41976" /translation="MNVPTQNITPSVTTGPLPASRKIYVNGQHYPEIAVPMREISTHP TAGEAPLAVYDSSGPYTDPDRTTDIRQGLPPLRRSWIMARGTVEDYEGRHVKPEDNGF VTGDRLVPEFPVQRRPLRAKPGAAPTQLAYARAGLITPEMEFVAIRENQLRELTPCHR DGNDWGANIPDYVTPEFVRQEIAAGRAIIPANINHPELEPMIIGRNFLVKINANMGTS AVTSSMEEEVEKLVWAIRWGADTVMDLSTGRNIHNTREWILRNSPVPIGTVPIYQALE KVNGIAEDLTWEVFRDTLIEQAEQGVDYFTIHAGVRLHMVPMTVNRVTGIVSRGGSIM AKWCLHHHRESFLYEHFEDICDICRQYDVSFSLGDGLRPGSIADANDAAQFAELETLG ELTKIAWRKDCQVMIEGPGHVAMHKIKENMEKQLECCHEAPFYTLGPLTTDIAPGYDH ITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKTGVITYKIAAHAADLAKGLPGA QRRDDALSRARFEFRWEDQFNLSLDPETARDFHDQTLPKEAHKVAHFCSMCGPKFCSM KISHDIRAEAQKEGMAAMAEKFREAGDIYLPLDE" gene complement(1083324..1084325) /locus_tag="RTM1035_05355" CDS complement(1083324..1084325) /locus_tag="RTM1035_05355" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase, type I" /protein_id="jcventer:1101493006647_RTM1035_05355" /db_xref="CDD:30406" /translation="MTITVGINGFGRIGRATLAHISESLRNDIKVVKVNATGPIETAA HLMRYDSVHGRFAHPITVEGQTMDLGRGPIQMFSTYDMNELDWDGVDVVLECTGNFND GTKARTHLERGARKVLISAPAKNVDRTVVYGVNHDALLASERMISNGSCTTNCLAPLA KVLNDTIGIESGIMTTIHAYTGDQPTLDRRHNDLYRARAAAMSMIPTSTGAAKALGEV LPELAGKLDGSAIRVPTPNVSAVDLTFVAKRDVTKADVNAVVAEAAAGAMKGVLGYDP EPKVSIDFNHTEESSIFAPDQTKVIGNRLVRVLAWYDNEWGFSCRMADVAVAMGRLQ" gene complement(1084568..1087378) /locus_tag="RTM1035_05360" CDS complement(1084568..1087378) /locus_tag="RTM1035_05360" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="Nidogen, extracellular region" /protein_id="jcventer:1101493006647_RTM1035_05360" /translation="MEGLVIPGTPEADDLVGTADNDTITANAGDDTLTGGAGNDLLDG GAGFDTAVFAGNAADYSTGVNESAQRTITHTATGDTDILVNIQRLQFDNISTDVLLNP DNTSPGLIRGLGGDAGFGEDFLARNDDGSTVQIDITPIFENGLNFFGTVYQGLWINNN GSVTFTGPRGTFTPDVITGVSNNPNITPFFADVDTRGGEVAPTPGGNSQGSNLVHWDF NTLGDQLIVTWDDVGYFSSRTDLLNAFQLILTDRGNGDFDIQFRYEEVNWTTGNASGG TNGLGGTVARAGYTSGTGVEGTFFELPQSGNQDEILSLDVIPGNTGLIGIWNFAVRNG GVVDSIVPLLPPVGAGGWVAGDPHLATLDGVGYDFQAAGEFVLLRGTDSDFELQARMV PVGDNVSVNQAIATNLGGTAVMIDANDATPLHIGGVATEIEDFGSVAVGNDRIFREGD TYIIVYAGADNVVGNGDSQVRVIVRDGRVDIDVRLNEELLGRLEGLLGDGDGDASNDV ARADGTVLARPFAFADLYGQYREDWRVASEADSLFTYDAGESLDGFYLPEFPGEIVSL DTLDPAVRDAAIAAALDAGLIQGTPNFENAVLDFALTGDSSFFDSAAEVPASVTETVT TADPVSLNLEGTEGNDTLLGATLDDTLSGLGGDDRLEGRGGNDQLSGGEGNDTLDGGA GDDRISSSDGNDLAIGGAGNDNIGGGLGDDTLDGGDGDDILGGGFGADSVTGGAGNDV VAGGAGDDTLSGGDGNDSMSGSFGNDLIDGGEGADDIGGGTGQDTIDAGAGNDSVGGG EGDDSILGGDGNDFLAGGGRNDTIDGGAGNDTINAGAGNDVITGGTGADQFVFSAFFD GEADVITDFEDGLDSFFIRRFDPDTGVENINNGGNGLAGFVTAMNIVDVTGGAQMTVN GNTILVEGITAAQLTVDDFTFL" gene complement(1087494..1089290) /locus_tag="RTM1035_05365" CDS complement(1087494..1089290) /locus_tag="RTM1035_05365" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05365" /translation="MDNFTANAQTTGFLEIGGSVSGSVADGWDWIAVNLEADTAYRFE IDMGLPFVQILSPDEIPLMNNTGDPELRSDQDNVFVFSPQQSGRHFISIGATFGTMGG DLDNYVIRANVFQDDVPGDVTTHATLAPNTSVQAQMDFGNDYDWFAVELTAGEAASFE LDGIALFDLSVRDANGESLASSDARASNKYVTYIPDESGTFYVSARYAVGYDRYANFF PIPYSVTWVDAILPLTEVGTLGNDTLLGNRDDDFLNGLAGDDRLAGDEGNDTLLGGDG NDRLFGQEGGDEIFGESGDDRLNGSLGHDTLNGGEGHDSLSAGLGDDSLTGDAGNDNI GGGLGNDTIDAGDGDDTVGGGSGNDLITGGLGDDFLSGGWDRDTLDGGDGHDTLTGAS GADYLSGGAGDDIVAGASGNDRITGDAGNDRLSGSAGDDRIDGGDGADQIGGGTGRDT IIGGAGDDQVGGGKGDDSIQGGSGNDDLSGGSGADTIEGGDGNDTVNGARGDDVLSGG AGADHFEFTVAKEGETDSVLDFEDGVDLIVIRFMAMDTPEPPTAPSSAAPFETLGIVD TASGVEISFNGQTVIVQGITAAQLTVDDFTFL" gene 1089415..1090950 /locus_tag="RTM1035_05370" CDS 1089415..1090950 /locus_tag="RTM1035_05370" /EC_number="6.3.5.-" /note="COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit B" /protein_id="jcventer:1101493006647_RTM1035_05370" /db_xref="CDD:30413" /translation="MSAGGSAMLDLAYETPKPRVIAGAKHDWELVIGMEVHAQVASKS KLFSGASTQFGAEPNSNVAFVDAAMPGMLPVINEFCVEQAVRTGLGLKAKINLWSAFD RKNYFYPDLPQGYQISQLYHPLVGEGEILVDMAPGVARLVRIERIHMEQDAGKSIHDM DPAMSFVDLNRTGVCLMEIVSRPDIRGPEEAAAYVTKLRQILRYLGTCDGNMQNGNLR ADVNVSICRPGQYEKYMETQDFSHLGTRCEIKNMNSMRFIQAAIEYEARRQIAIVEAG GTVVQETRLYDPDKNETRSMRSKEEAHDYRYFPDPDLLPLEIEQAWVDEIAANLPELP DAKKARFVLEFGLSEYDANVLTADLANAAYFEAVAEGAGDGKLAANWVINELFGRLKK EDHSIEDSPVSPAQLAGIVRLIKSDAISGKIAKDLFEIVYTEGGDPEEIVEARGMKQV TDTGAIEQAVAEIIAANPAQVEKAQANPKLAGWFVGQVMKATGGKANPKAVNDIVMAK LGL" gene complement(1091024..1092310) /locus_tag="RTM1035_05375" CDS complement(1091024..1092310) /locus_tag="RTM1035_05375" /note="COG4928 Predicted P-loop ATPase" /codon_start=1 /transl_table=11 /product="KAP P-loop" /protein_id="jcventer:1101493006647_RTM1035_05375" /db_xref="CDD:34537" /translation="MKGFLAMSFVKSTSLPIPYETGFPEPDLFGLKHKGKTLSRALEV AEGPVVIAFDGPWGCGKSFFLRAWSKDHDLKADVIYFDAFEHDYLDDPLISLVQAIVP KVQTSASEKLINGAKRVIPLVGKIALGWATLGAVKELGDLGDIVAAEMAGEATEALDT LWKIETGRHDAMRIFKESLEALVKESSNSMLVIIIDELDRCRPDYALQMLETIKHFFA VDGVHFVLGTNLNQLSNSVRSRYGERVNAEKYLQRFIHATLGARQRSTRSSYEKRAEI QYFTKLDSNYDFESVSEILAVIPGNTSMTFRDTERLYTMCKIIHPSENAIEREILLTL CIVKSCEPSWITELVDGTLDYQKLVKFFGLKSVENIGDTYYPNALRVLATAIGFHDIN SLPELTRPMMKTRLKDGKERYLSELASRELDSIRVR" gene complement(1092536..1093312) /locus_tag="RTM1035_05380" CDS complement(1092536..1093312) /locus_tag="RTM1035_05380" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05380" /translation="MMFNLDGADVRHDPFPIAFAKPVFDADLYQEMLDNWPDTERFQF MPKLGNKYSLSEVNNAKQYHDFIKSTPVWKRFHDEVKSERFVRGIVDFLASHNIDLDL GRKMVLTNTPGARLGLRLTEALCGAALVERRKTPLRSRFEFSMMPGDGGSILPHTDAP AKLITVVVSMVAPGEWKPEYGGGTSVVWPKDKTRSFNFRNTFLPFEEVDTLDCYEFNS NQCMIFVKTFNSWHAVEPIKAPRPDMFRRSLTINIEVPKN" gene complement(1093343..1094140) /locus_tag="RTM1035_05385" CDS complement(1093343..1094140) /locus_tag="RTM1035_05385" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="Methyltransferase FkbM" /protein_id="jcventer:1101493006647_RTM1035_05385" /db_xref="CDD:45472" /translation="MFRLRFALAQALSMTIEVRTDAGSYRFACRSYTEYKRAVTLLQK EEGTIRWLRDTLRPGDTFCDIGANVGLYSVFSGNLVGETGHILSFEPHAANALSLMQN MALNGLSSRAKVISAALGDRNGFFDFNIIEATAGSAMSQLDRTLDGHERPFVPVLREF KAAFTLDHLVAEGIVPTPDVIKVDVDGNELLVMAGMRNVLGSAKRPRSVQVEVSPHYA EDLDAFMDGLGYRAQKRHRTDIGLRKLARGADPVLIAHNAIYAPAAA" gene 1094393..1096021 /locus_tag="RTM1035_05390" CDS 1094393..1096021 /locus_tag="RTM1035_05390" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="jcventer:1101493006647_RTM1035_05390" /db_xref="CDD:30666" /translation="MGWMKEETGLEKCAANFVALTPLSHLRRAAQIFPDREALVYRGT RRTYAEYHARVSRLASALVKLGIEPGDVVATLLPNIPAHCEAHFGVPACGAVLNAINT RLEADTIAYILDHGGARVVLCDPQFLPVLAQAIELMEGPPPGVVEVADDAAGVHAHGH YMEYEELLASGDPDFAWIMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVV SWQLPRYPTYLTIVPLFHCNNWNHVWLMPMLGGRVVCCRDITARAIYDAIADEGVTHF GGAPIVLNMIVHAKEGERRAFDHVVDVFTAGAPPPAATLAAIEPLGFTVTQVYGLTET YGHVTECLWQDGWDALPEDERYTIKARTGVLMPMMEEITAMDPETMAQIPMDGATLGE IMIRGNSVMKGYLKNPAATAEAFRGGYFHSGDIAFQHPDGYLKIADRAKDIIISGGEN ISSVEVEGVLMRHPAVMLCAVVAKPDEKWGEVPCAFVELKDGAEVSEAELIAFARERL AGFKTPKAVVFQELPKTSTGKIQKFELRQSARAL" gene 1096120..1097508 /locus_tag="RTM1035_05395" CDS 1096120..1097508 /locus_tag="RTM1035_05395" /note="COG2030 Acyl dehydratase" /codon_start=1 /transl_table=11 /product="bifunctional enoyl-CoA hydratase/phosphate acetyltransferase" /protein_id="jcventer:1101493006647_RTM1035_05395" /db_xref="CDD:30628" /translation="MKIENRVFDELQVGQSQSLRRLCTQDDLLVFANMSGNHNPMHLY DLDGDGDGQPEAYVPGMFLGALISAVLGNLLPGAGTLYRAQSLVFHNHAHAGDEVESR VTVTDRNDRDMTVTLATEVRRLRDDALIVSGVAVVEAPRRKLNYSSHDLPGLIVQRHR HFEKLLKRAEPLEPLVTAVVCPEEVNSLGGALRARAHTLIAPILIGNPIRIAAAAQAL EADLTGIEIIAEPDPEAAARRAVALVQAGRAGAVMKGHLHTDQLLRAVLDKAAGLRTA RRLTHIFVMDVPGLAHLLLVTDAAINITPDLRAKMDIVQNAIDLALSLGIEMPKVGVL SAVETVNPDLPSSIDAALLSKMAERGQITGGLVDGPLAMDNAVDMAAARTKGLSSPVA GRADILVVPNLDAGNMLAKQLTYLAHAEAAGVVLGARVPIILNSRADDDMARLASCAV AALHHAWLTGPG" gene complement(1097515..1099449) /locus_tag="RTM1035_05400" CDS complement(1097515..1099449) /locus_tag="RTM1035_05400" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="periplasmic sensor signal transduction histidine kinase" /protein_id="jcventer:1101493006647_RTM1035_05400" /db_xref="CDD:33926" /translation="MLILALLPLAVLMPLLLLVAINRWSANYDNLLITNVASDLRIAD QYLQRLLTSTGSEVTSLARSLRFDEVARTSPADLPAFLEENRRALGLDFLYFMPQHEA RKRSADWPVIDTALRGQPATEIDIFTPGDLLSLPQTGVTLANRARVPLVATVAAQPTS RQTEDRGMVVHSATPVTAIGAQGVLVGGLLLNRNLDFIDTINALVYRDTGTTGDRQGT ATLFLEDVRVSTNVRLFAGERALGTRVSAAVRATVLDKGQTWLDSAFVVNDWYISAYR PLTDSFGKRVGMLYVGFLQAPFDAAKRRAYLLVLAAFLVVLAVSAPLFLRLARNIFAP LERMTRTMEEVEAGDMTARIGPIAARDEIGTVAAHLDTLLDQVQERDRALRAWNEDLN ARVEARTAELREANAKLETTYQQLVMSEKLASIGEITAGVAHEINNPAAVIQGNLDVI RQTLGAHTEPVITELNLIDRQIGRITAIVGKLLQFARPGEFGTFEENVDLASVLRDCL VLVDHVVTRSGHTVTLNAHPDTPPVRINPGELQQVIINLVTNAAQAMKTPGHLTLTTR PEDRGSCPGAALLVADTGPGIPKDKLPLVFDPFFTTKQGEGTGLGLSVSQTLIQQAGG RITVRNRVEGGAEFTVWMPG" gene complement(1099559..1100575) /locus_tag="RTM1035_05405" CDS complement(1099559..1100575) /locus_tag="RTM1035_05405" /note="COG1840 ABC-type Fe3+ transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ferric iron ABC transporter, periplasmic ferric iron-binding protein" /protein_id="jcventer:1101493006647_RTM1035_05405" /db_xref="CDD:32025" /translation="MHPIKAALSMTALLALTAPALAQEVNLYSSRHYDSDDALYEAFT KETGIKINRIEGKEAELIERMKAEGANSPADVFMTVDVGNVSRAVDEGLLQPFSSDLI ESNVAANLRHPDNLWTGLSQRSRIIFYAKDRVETPPQTYEELADPKYQGQICIRSSSN VYNQSLLASIIEVHGEEAAKEWAAGIVANMARAPEGGDTDQLRGIVSGECDIAVSNTY YFARGLAGDVDGLTSGIDGIGWVWPNQEDRGAHMNLVAAGIAVNAPNPEEALALLEFL ASETAQEQFANGNNEYPVLAGVDIGEHVAKLGEFKPDSTTPTASFGANAAKAQAIFNE VGWN" gene complement(1100663..1101472) /locus_tag="RTM1035_05410" CDS complement(1100663..1101472) /locus_tag="RTM1035_05410" /note="COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC-3" /protein_id="jcventer:1101493006647_RTM1035_05410" /db_xref="CDD:41025" /translation="MLDDFMVRAALAGLGVALAAAPLGSFVVWRRMAYFGDATAHAAI LGVAMALAFSMSVFVGALAMSLIMATTVSTLSGRGFAMDTMLGVLAHSALAFGLVAVS FLSGVRIDLMAYLFGDILAVSRADLLVIWGGAALVLSLLAWRWQALLTATLSPDLAWS AGIDPRREQLVLTLALAVVVAVAIKVVGVLLIAAMLIVPAAAARPLAATPERMAAIAT LIAGGSALGGLRLSFQFDTPTGPTIVCVAALIFATTALIGSGLRHHGAASD" gene complement(1101472..1102239) /locus_tag="RTM1035_05415" CDS complement(1101472..1102239) /locus_tag="RTM1035_05415" /note="COG1121 ABC-type Mn/Zn transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="zinc ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006647_RTM1035_05415" /db_xref="CDD:31318" /translation="MRLIETKGLTVQFGRSTVLSNVSLALDRGEIVTIVGPNGSGKST LLRTLIGAQKPARGEIIRRPGLRLGYVPQKLHIDPTLPLTVTRFLSLPRHHPAEATRA ALEQAGLPDLRNRQMTDLSGGQFQRVLLARALLEKPDLLILDEATQGLDQPGSAAFYR RIEEVRRELNCGVLMVSHELHVVMSASDRVICLNGHICCEGHPEVVAQAEEYRAIFGT GTQGALALYRHEHNHAHDHDHDHGPAHDHPHSHEAAE" gene complement(1102230..1102751) /locus_tag="RTM1035_05420" CDS complement(1102230..1102751) /locus_tag="RTM1035_05420" /note="COG0735 Fe2+/Zn2+ uptake regulation proteins" /codon_start=1 /transl_table=11 /product="putative ferric uptake regulator, Fur family protein" /protein_id="jcventer:1101493006647_RTM1035_05420" /db_xref="CDD:31078" /translation="MIPRATPTEGKMDTIGFEAHDHKGCMRAALAAVEAHCARHKLQF TPVRRRVLEILLSEHRAMGAYEILDTLRSEGLGSQPPVAYRALDFLVTHGFVHKIERL NAFIACTHPGQDHTPAFLICRQCDAVAEAHAEPSKGMLGRAAADSGFTIEQAVVEAMG LCPQCRESAQPCA" gene 1102815..1103861 /locus_tag="RTM1035_05425" CDS 1102815..1103861 /locus_tag="RTM1035_05425" /note="COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin" /codon_start=1 /transl_table=11 /product="ABC-type Zn2+ transport system, periplasmic component/surface adhesin" /protein_id="jcventer:1101493006647_RTM1035_05425" /db_xref="CDD:34180" /translation="METAMPIRFLAPLSLGMTLASAAMADAPRVATDIAPVQSLVARV MQGVGEPDVIVRSGASPHGYAMRPSEAAALEEADLVFWMGEGLTPWLEGAIDALASEA HAVELLGAAGSRVLPFREGVAFEAHEDHGHEDHGHEDHDHEDHDYEDKGHEDHAEAHG HDHDHDHEHGHDHAHDGADPHAWLDPANAQAWLGLIAQELSEHDPENATIYAANAEAA QAELQALSEEIKAQLAPVRDVPFLVFHDAYQYFETAFDISAAGAISLSDAVAPGPARI AALREMAEARGVTCVFSEPQFDPKLVETVFGEGVSHGVIDPLGSQLAAGPGHYPQMLR DMAGAMVACVSGAS" gene 1103988..1105871 /locus_tag="RTM1035_05430" CDS 1103988..1105871 /locus_tag="RTM1035_05430" /EC_number="2.3.1.86" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="acyl-CoA synthase" /protein_id="jcventer:1101493006647_RTM1035_05430" /db_xref="CDD:30666" /translation="MAFMTRQDALDIQNEMPWAARERPQTIYQMLSNVARSFPDRPAI SYQLFSGATDKAQTLTWQQFHDQCCQAANLFRSLKLGEGDVVALVLPNCLETAVATIG GMIAGIVNPINPLLEPEQISAILRETGAKVVVTLKAFPKTDIAQKTAEAVRHAPSVHT VIEIDLNRYLTPPKSWIVPLVRPKNPVQHHADCLDFNKAIARQPKTLSFADSTGDRVA AYFHTGGTTGMPKVAQHKYSGMIYNGWIGHTLLFTEQDNVMCPLPLFHVFACHVILMA MIKSGAHVVFPTPAGYRGEGVFDNFWKLCERWKISFIITVPTAVSALMQRKVDADLST VKNAFSGSAPMPLELFNRFESATGIAVIEGYGLTEATCLVSANPPEGEKKVGSVGVPF PYTDVRIIKGTPDGPMDCAVDEVGEICISNPGVYAGHTYTEGDKNRDLYYHGDYLRTG DLGRIDAEGYLWITGRAKDLIIRGGHNIDPAEIEEALMVHKAVAMAGAIGQPDAHAGE IPCAYVELVAGATVTGEELLEHCKRHVHERAAVPKHVEVLAELPKTAVGKVFKPDLRK LAITRIYNAALADAGVDARVTSVVDDKKLGLVAKVSGSASAEGEAVGHVLGQFVRPWD WAK" gene complement(1105988..1107553) /locus_tag="RTM1035_05435" CDS complement(1105988..1107553) /locus_tag="RTM1035_05435" /EC_number="2.3.3.13" /note="COG0119 Isopropylmalate/homocitrate/citramalate synthases" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="jcventer:1101493006647_RTM1035_05435" /db_xref="CDD:30468" /translation="MTNTSKDRVVIFDTTLRDGEQSPGATMTHAEKLEIAGLLDDMGV DIIEAGFPIASEGDFNAVSEIAKNSKNAVICGLARANFKDIDRCWEAVKHAARPRIHT FIGTSPLHRAIPNLDMDQMAERIHETVTHARNLCDNVQWSPMDATRTEWDYLCRTVEI AIKAGATTINIPDTVGYTAPEESASLIRRLIATVPGADEVVFATHCHNDLGMATANAL AAVAGGARQIECTINGLGERAGNTALEEVVMALKVRGDIMPYETGVDTRKLMNISRRV AAVSGFPVQFNKAIVGKNAFAHESGIHQDGMLKNAETFEIMRPEDVGLTETNIVMGKH SGRAALRSKLKDLGYELADNQLNDVFVRFKELADRKKEIYDDDLVALVNAGVDPDNNR LQIKHLRVICGTDGPQQATLTMDIDGREVSTEATGDGPVDATFNAVKALFPHEARLQL YQVHAVTEGTDAQATVSVRMEEAGRIVMGQSADTDTVVASAKAYVHALNRLLVRREKT GSDAREVSYKDVS" gene 1107816..1108481 /locus_tag="RTM1035_05440" CDS 1107816..1108481 /locus_tag="RTM1035_05440" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05440" /db_xref="CDD:31231" /translation="MEKALIIGASGGIGQAVSAGLEARGVTVTGLSRSGDGLDVTDEA SVAAALGALDGPFDLILVTTGALEIAGAAPEKALRQVSAQAMLDQFALNCVGPSLVLK HSLRLLPREGRAVFAALSARVGSIGDNNFGGWYSYRTAKAALNQMIHTGAIELGRSHR GAICVALHPGTVETEFTRKYLGRHPAVPAAQAAENLLGVIERLRPEESGGFFDWQGAT VPW" gene 1108475..1110004 /locus_tag="RTM1035_05445" CDS 1108475..1110004 /locus_tag="RTM1035_05445" /note="COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase" /codon_start=1 /transl_table=11 /product="deoxyribodipyrimidine photolyase-related protein" /protein_id="jcventer:1101493006647_RTM1035_05445" /db_xref="CDD:32860" /translation="MVTRLLLVLGDQLSPDLSALRAGDKARDVVVMAEVRDEGSYVPH HPKKIALILSAMRHFAEALTAEGWQVAYTRLDDPAATPSIVGELMRRAEEFGASEVIA TQPGEWRLIEALSDAPLTVRQLPDDRFVCSLEEFDRWAEGRKELRMEYFYREMRRKTG LMMEGDQPAGGKWNFDHDNRKRAQADLLREGPLRFEPDAITQEVLDLVEARFGTHFGA LRPFWFGVTRDAAAQAFDHFARHLLPGFGDTQDAMLEGDAFLHHSVISMYMNIGLLDP VDICARVVEEWKEGRVPINAAEGYIRQVIGWREYMRGLYFREGPDYVTRNALGHKRKL PAMFWGAKTRMNCVAHAVETTAKEAYAHHIQRLMVTGNFALLAGIDPGQVHEWYLAVY ADAFEWVEAPNVIGMSQFADGGIIASKPYVSSGNYIDKMSDYCRSCAYSVKEKTGENA CPFNLLYWDFLIRNRDRFGRNPRMGPVYRTWDKMEAGRRQAVLDGAARVLADLDADRA I" gene complement(1110005..1111417) /locus_tag="RTM1035_05450" CDS complement(1110005..1111417) /locus_tag="RTM1035_05450" /note="COG4642 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="MORN repeat protein" /protein_id="jcventer:1101493006647_RTM1035_05450" /db_xref="CDD:34261" /translation="MTFSRTRPILLSIALGAASMAAAQDAEVQTKQYDDGGIYEGTFK DGLQHGTGSYTLPNGYEYTGEWVEGEIRGKGVARFPNGSVYEGEFARGKPNGIGKIVF TDGGTYEGAWEDGKITGQGVAIYANGVRYEGGFLNAMHHGRGRMQSPGGYIYDGDWVN GVKEGMAKITYPDGAVYEGAVARGAREGEGTLTMPDGLIYQGTWRAGEIDGKGKLTQP NGDVYEGDLVAGRREGTGRVTYQNGDLYEGAFKEDRRHGQGTFTGTDGYLYQGEWVAG KISGQGRVTYPDGSVYEGQFRDDLANGEGRIIYPDGATYEGSWVGGVIEGTGRATYPN GLVYEGEFKNARNHGTGVMTYPDGYRYEGEWQDGQRHGTGTATYPDGTIYVGGFVEGQ RHGQGKITMPDGFVYEGEWQNGEISGRGVATYTNGDVYEGMFRAGKRQGEGTMRYASG QEASGTWEDGALSGATTQTE" gene 1111571..1113238 /gene="nadE" /locus_tag="RTM1035_05455" CDS 1111571..1113238 /gene="nadE" /locus_tag="RTM1035_05455" /EC_number="6.3.1.5" /note="COG0388 Predicted amidohydrolase" /codon_start=1 /transl_table=11 /product="NAD synthetase" /protein_id="jcventer:1101493006647_RTM1035_05455" /db_xref="CDD:30166" /translation="MADRFRLTLAQLNPTVGDLAGNARLARDAWDKGRAAGADLVALP EMFITGYNTQDLVQKPAFHQAAIAAIEALARDCADGPALAIGGPALDGVSLHNAYYIL QGGSVRARVLKHHLPNETVFDEVRLYDSGPVAGPYTVAGVRIGSPICEDAWHEDVAET LAETGAEILLVPNGSPHYRDKMDLRQNMMVARVIETGLPLIYLNMVGGQDDQMFDGGS FVLNPGGALAVQLPMFQEAVAHVDLERGPEGWRALPGDLAHLPDDMEQDYTAMVLSLR DYLRKSGFSKVLLGLSGGVDSAIVATIAVDAVGAENVRCVMLPSEYTSAESLEDAKAV AENLGCRYDFVPIDAGRAAITATLAPLFDGRAPDLTEENLQSRLRGLLLMALSNKFGE MLLTTGNKSEVAVGYATIYGDMAGGYNPIKDLYKTRVFEICRWRNAQYRGWMLGPKGA VIPEQVISKPPSAELRADQKDSDSLPDYPVLDGILEILVDQDGSISDCVAAGYDLADA KRVEHLLYISEYKRFQAAPGTRLSKRAFWLDRRYPIVNRWRDGSAQG" gene 1113356..1114159 /locus_tag="RTM1035_05460" CDS 1113356..1114159 /locus_tag="RTM1035_05460" /note="COG3509 Poly(3-hydroxybutyrate) depolymerase" /codon_start=1 /transl_table=11 /product="putative polyhydroxybutyrate depolymerase" /protein_id="jcventer:1101493006647_RTM1035_05460" /db_xref="CDD:33312" /translation="MRVLAILLALSALTGPAWACGPDTDCQLGDRHYRIAMPEGQIGS PVGAVVFAHGYRGSAAAVMQNQNLRQVVSDMGLALIALKSADDDWVIPYAPRHMDSDG SVEFRYVEAVIEDAARRFPIDTKRLMAAGFSAGGMMVWNLACTMPERFAGFAAIAGTF WMKPPETCATPAASLVHIHGTTDPTVPLAGRPILETRQGDVAESLDMYQALGGFTPTG ETEFEDLACQNRRNATGDVLDFCLHPGGHSFRSSYLRFAWEKLQAAGQL" gene 1114229..1115008 /locus_tag="RTM1035_05465" CDS 1114229..1115008 /locus_tag="RTM1035_05465" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="methyl transferase-like protein" /protein_id="jcventer:1101493006647_RTM1035_05465" /db_xref="CDD:32408" /translation="MSEDILYDQSHIGFLEDLWGEGFLSPGGQDEVARVLDGVDLTGA KVLDIGCGSGAIAVLMVRVHGAAHVTGIDVEDPVCAAARARATAAGLAGQITIDKVTP GPFPYPDQSFDVVFSKDSIIHIPDKEALAAEVFRVLKPGGVFAASDWLRAHDGAPSPE MAHYIALEALDFAMASPARYRAALAAAGFADVALVDRSPWYAEVAAAELRELSGPRRA EWEARHGAEFIAHQIETWTAMVPVVQSGEHCPHHIRGRKPG" gene complement(1115018..1115815) /locus_tag="RTM1035_05470" CDS complement(1115018..1115815) /locus_tag="RTM1035_05470" /note="COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05470" /db_xref="CDD:45617" /translation="MVEIARLKADTDPGTVAKRLLQDGGVVVENVAGSNLLDRVTSDL RGPFDQQGHKFANDFNGYKTRRLGSILKISEAAADILAHPLVMEVADRVLKRHCVNYR IGSSTAIEILPGEKAQVLHRDDDFYPIRIPGVEFQISAMWALDDFTAENGATRVVPGS QDLRPINSITDDQITQAVMPRGSVLFYLGATVHAGGANRAAAPRKGLITTYSLGWLRQ EENMYLSVPKSKADAYPDDVRRLLGYQGHGRNLGVYPGDPDGYWFDA" gene complement(1115808..1117295) /locus_tag="RTM1035_05475" CDS complement(1115808..1117295) /locus_tag="RTM1035_05475" /note="COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05475" /db_xref="CDD:30510" /translation="MGSPHGTADAGQICLLPPAPRPRHPARQHLNSDGDDMNTHANTP APDDLTLWDRTHNLHPWTGIRDWRKSDLLRVNTAQGIHIWDSTGKRHIDGPGGMWCVQ IGYGRAEMAEAIAAQAMAMPYASPWSFTTEPAALLARKLAELTPGDLNTVHFTTGGST AVDTAIRVVQFLNNRLGRPDKKIVLSREKAYHGSTYLAATVTGKERFKTRFDKADDLV RFLPDVNPYRRPEGMSVADWGDLKIAEFEQMIAEVGPERIAAFIAEPILCSGGVVVPP PGYHQRTHEICRKHDILYISDEVVTGFGRLGHWFASQDVFGFTPDIITCAKGLTSGYV PLGACILSDALMERLAGVEGDDVFYNGYTYCGHPVACAAALKNIEIIEREDLLAHVRR ITPQFQARLRAIGERFDIVGDARGMGLLGCLECRPDLSDESYAKHLQFGAKLDAACEA RGLLLRPYGNMAVFSPPLIITTEEIDEMFDIMEAGLTQLSAEYDG" gene complement(1117205..1118377) /locus_tag="RTM1035_05480" CDS complement(1117205..1118377) /locus_tag="RTM1035_05480" /note="COG0404 Glycine cleavage system T protein (aminomethyltransferase)" /codon_start=1 /transl_table=11 /product="aminomethyltransferase" /protein_id="jcventer:1101493006647_RTM1035_05480" /db_xref="CDD:30753" /translation="MSIATDPKLGLIDGPVHPRLAPLNRAQGWYGWAGYAAPSLLDTV EFEYFALRNQAALFDVSPLHKYRITGPDAARVLNRLVTRDVTKIPLHRVGYAIWCDEE GMVIDDGTLFHLGAEDWRLCCQEPMLRWLLDAAWGFDVDILDESRKIAGLALQGPTAY AVLRAAGLDLGHLRPFDLAGVEPGLMISRTGFTGDLGYELWTAWGDALPLWDRLWQAG EDLGLRAIGYEAVNIARIEAGFMVAGVDFQPAHATERLHRGHTPIELGLGPMVDLTKG HFNGRRALLAAKPRSLLMRLDVEGFKPAQGALVYHAKRREVGHVTSGVWSPTAKRNIA LAHVRMPMAAQHPSNLWAEIYTLEEGQWDRRMARLTPVKSAFFRPPRARATPPGNT" gene complement(1118374..1119966) /locus_tag="RTM1035_05485" CDS complement(1118374..1119966) /locus_tag="RTM1035_05485" /note="COG1233 Phytoene dehydrogenase and related proteins" /codon_start=1 /transl_table=11 /product="phytoene dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_05485" /db_xref="CDD:31426" /translation="MAPRPAQGLCRMSAIRTFDSIVIGGGLNGLVAAGVLARAGQSVC LLERAAHLGGMAAPGASGAPRMAHLLYNLSPVVRRDLGLGARDWPFETAALPTVALSE DGRHVVTQGASARFADGSPHPDAAAFAALHERLTGYAALLRHLAEAAPPGGDAPILSS ARLKEVLRLGRVGLGLRRMGKPEMRRFLQILLSNAYDLILDDIPDGPLAGLMAADAVR GAAAGPRAPGTVFGLLYRMGHGGGASLPIGGMTAVIDAFAGAAGRAGAVIKTGCGVAR ILTDQDHVTGVITDRGETLNATRVLSSGGARMTAEMAGLAHFDIEATRRLRHIRARGT VAKINLTLDALPTIPGLPDDLLSARLVIAPSASYVEEAFNPSKYRETSPHPVIEALLP GQTDPAQRGAQGHALSLIVNYAPVDLAGGWDDPARDALLQTTLNTLTRYAPGLSDLVT GAEVIPPDQIEAETGAPGGHWHHAEMSLDQLLALRPAIGIGRYGMGPSGLFLCGASAH PGGDLMGLAGRNAAHAALGGTP" gene complement(1119930..1121567) /locus_tag="RTM1035_05490" CDS complement(1119930..1121567) /locus_tag="RTM1035_05490" /note="COG1233 Phytoene dehydrogenase and related proteins" /codon_start=1 /transl_table=11 /product="phytoene dehydrogenase" /protein_id="jcventer:1101493006647_RTM1035_05490" /db_xref="CDD:31426" /translation="MRPQSSFDAIIIGAGHNGLTAAAYLARAGRQVLVVEKNDWIGGA AVSRSLHDGWTYSNCSYVCSLLRREIVRDLDLPKYGLQVIPYEGGASFTPDGDYFAYY SDHHALQREMARHSPRDADAYPRYAQMIMRQCRFIRPFLLRDAPDPASLHPRDLGEMA YMVKRAHGLGRRELAETLRFWTMSIGDLLDEHFESDLIKAHLAGSGIIGTGLGVYSPG TAYVLLHHYMGDIDGGIGAWGFARGGMGAISNALGAAFEAAGGTIHIGAGVAQILVKE GRVTGVALEDGREFHAPVVASNMDVKRTFLRHVDRAALPEDFTRAVERFKIRGSSAKL NIALDRLPAFPAAPANASFLRGDLHVSQSLWELERAYDDWKAGRWSARPYIDMLIPSQ IDPTMAPPGSHMMTVFVQYAPYDLVADGQRSGQNWTDTARHALAETVLDQITIACPDI RDRIQHMEIRSPLELETEVGLTEGNIFQGELTFDQLFFNRPVPGYSGYGSPIGGLYLC GSSAHPGGGVMAAPGANAARAILRREWPRAPRKGYAA" gene 1121706..1122347 /locus_tag="RTM1035_05495" CDS 1121706..1122347 /locus_tag="RTM1035_05495" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family protein" /protein_id="jcventer:1101493006647_RTM1035_05495" /db_xref="CDD:31500" /translation="MTDATPRKPRKERKENAERRRRQLLDAARRSILTHGLAKTTLAT VADEAGLSQGVAVFYFTSKSGLLTETLRDLYEGYENLWMRALEQTGDAPLDRLMALLD ADFSAEACGPDVLPLWFAFWGELRFTGHYAEVAAEFDARRHRALSGIWAALLPESCRS DADQMAEWMESLTDGYWQRLHLAPESHDRTHALAASKLCLSRLVPELLPAPPA" gene complement(1122357..1123115) /locus_tag="RTM1035_05500" CDS complement(1122357..1123115) /locus_tag="RTM1035_05500" /note="COG3450 Predicted enzyme of the cupin superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05500" /db_xref="CDD:45792" /translation="MRDNTGIIRLHANGPDGLTPVTVDPAEFDTPPEAQNLHIYFADP ALGLNVGVWQSAPMQEAFGPFPGDEFIVMLEGAFGLRDGAGTGVGAGAKAGQCAAIRN GIPVSWHQDGSVRKFFMTYNDPRAAAPQDLTAEGGLTTLSPEMTLTDAELMEDTSTPQ RDRILFSNDLGNFDVGLWDTQVLNTELEPFPYHEMAQVLEGEVYLTEADGTRHHFTAG DVFFIPAGTPCIWHVPSYLRKFYAALDPENRPDG" gene 1123378..1124502 /locus_tag="RTM1035_05505" CDS 1123378..1124502 /locus_tag="RTM1035_05505" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="ABC transporter,binding protein" /protein_id="jcventer:1101493006647_RTM1035_05505" /db_xref="CDD:31031" /translation="MDILDQLGAVREGKLSRRKFTKGLLAAGVAMTTVPLPARRAMAS EGEQATYFTWGGYDIPELFGPYQEQNGTLPNFAIFGGSEEALTKMRGGFVVDVSHPCN QSMPRWVQTGLFQPIDTARVANWGDVIPELVDLPGNGAEAGKVWMAPFDWGQTSITYR TDLVELEGEESWDILWDPRYAGRLGSLASGGDAWWCGAIKAGIDFANIDTPEAFDKIA AVMREQRPLMRLYTDDTTTLEQALSAGEMVASMTWNSSAVLLQAEGIPVKFARPKEGA LTWVCGVMIHKDAPNLDRAYDVIDSLLSVETGHFMINDWGYGHSNSKAFDQFEEETLA GLGLSKNPVEILNAGHFQQPQTQEWETQMNELFEQIKAGF" gene 1124574..1125509 /locus_tag="RTM1035_05510" CDS 1124574..1125509 /locus_tag="RTM1035_05510" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, permease protein" /protein_id="jcventer:1101493006647_RTM1035_05510" /db_xref="CDD:31369" /translation="MAETSLPKSRTADRPPRASGSRILRLFQRSESARGYLMMGPTLA IMTFGIVVPFVILLVISLWTRQGFGFDTTLTLNNYIRSWNEPIYGTLMLRSFWMSGLA TVATVLLCYPMAYFVAFHVHRNKMLWIILMTLPFWTSYLLRVFAWKVILGYEGVINSG LMSVGLIEAPLSFLLYSPTAVIITLAHAWAAFAILPLYVSLEKIDRSLLEAATDLGDG PMARFFRVTLPLSMPGVIAASFLIFIPTTGDYITPALLGGPDGAMIGNLIQLQFGAVN NWPMGATLSIVLMFWIAALALVFLLVTRKVQGRIT" gene 1125506..1126306 /locus_tag="RTM1035_05515" CDS 1125506..1126306 /locus_tag="RTM1035_05515" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, permease protein" /protein_id="jcventer:1101493006647_RTM1035_05515" /db_xref="CDD:31370" /translation="MSSYIKRPNRALQLYAVLFLIVLYVPVLFIPLFSFNDSIYVRFP LQGFTLQWYGELWTREPVWNALWNSVKVGLVVSVISTVLGVMAARAITRTRMRGKGAL VTFIMMPLVIPGIIFGVALLVLLSRMGVPLSLYTVGLGHLIICLPFAVATLLPRFEGF DPSMEEASADLGENGWWTFWRVTFPMVLPGIVASLLLTFTISFDEFIMAFFLTGTDPT LPMYIWGQLRFPKEFPSVLAMAALILFVSFALVFVAQWIGRKGLEDQE" gene 1126320..1127423 /locus_tag="RTM1035_05520" CDS 1126320..1127423 /locus_tag="RTM1035_05520" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006647_RTM1035_05520" /db_xref="CDD:33633" /translation="MTPSDRFISIRNVSKRFGAFTAIEEVSMDIAQGEFFSLLGASGC GKTTLLRMLAGFESTSNGEIFIDDQPMSDVPPHHRPVNMVFQSYAIFPHLNVRDNIAY GLRKQKLTAARRAEMVEEMLDLIKLPGYGSRKANELSGGQRQRIALARALILRPKVLL LDEPLGALDKQLREQMQLELRALQRQVGITFVFVTHDQEEALTLSDRIAVMSGGKVLQ VDTPAGLYEAPRTRAVASFIGNMNFFHGTVRRNGSAMAAIEAEGLGTIPMATAQLTKP DGAPLHIGLRPEKFSLSPTRPEAGLAVEGRLRTAAYMGERSQYYLSIPGKAEPVAVSA PNTDRRMGADDLPEGQALWLSWSPEAIVILDTD" gene 1127471..1128169 /locus_tag="RTM1035_05525" CDS 1127471..1128169 /locus_tag="RTM1035_05525" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family protein" /protein_id="jcventer:1101493006647_RTM1035_05525" /db_xref="CDD:31500" /translation="MQQIAPSPTRDTGKPRRTEPKQVRRRQLIEATIDSIAQYGIAGT TMSTVTEIAGLSLGLVNFHFQSKQNLLEETLKFLAREHHDHWRRAYGDAGLSARDKLM AIVDSHFDPKICTQRKLAVWYAYFGEGGRRTVYRALVDALDNERFDLSKRLCRDIARE GGYSGPSADTIAHTLEGLYDGLWLNILMYPDTFDRDAARAKVQAYLAMAFPRHFDMPQ DETADQSTRTERCE" gene 1128166..1130232 /locus_tag="RTM1035_05530" CDS 1128166..1130232 /locus_tag="RTM1035_05530" /note="COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family" /codon_start=1 /transl_table=11 /product="probable methylamine" /protein_id="jcventer:1101493006647_RTM1035_05530" /db_xref="CDD:28794" /translation="MSRDPSHDILFEPVRIGPVTAPNRFYQVPHCTGMGWMRPRTLAA MRGVKAEGGWGVVCTEYNSIHPTSDDLPHPSASLWDMSDVRAHTLMTEAVHAHGSLAG AELWYGGARTPNMMTRLPPMDLGSVPNLAGHPYQTRAMDKSDIRQFRHWHKRAALRAR DAGFDIVYVYATHGYLISNFLNPRINTRGDEYGGSLENRVRLVRELIADTKDAVGDRC AVAVRFSADEEGGSDGHPVWGERRDMFAMLAELPDLWDINIADYSLEMGVSRFVKEGA LEPYMTWVKSVTTKPVVTVGRFTSPDTMAAQVRRGIVDFIGAARPSIADPFLPRKIEE GRLSAIRECIGCNICYSGDSLGVPIRCTQNPTMGEEWRRGWHPERIAPQGSVAHVLIV GAGPAGLEAARALGARGYRVTLAEATRDLGGRVLREAGLPGLREYIRVRDYREQALRD MPNVEIFRESRLTAQDVLDVGADHVAIATGAQWRKDVFDGEVFQSVAEGAAEAHILTP DDIMAGRLPDGPTVVYDGDGYYMGGVLAERLRMAGLEVTLATPDDSLSRWAGNTAERW RVRRHLQGLGVRFEPAREIAGFDGRAVVLPCAYGGAELTVAASHLVMVSARRPEDGLY HDLCAMAGPLPFTLTRIGDCEAPAIIAAAVHAGHRYAQELDAPVDPDLPLKHDRIDVG APGGAA" gene 1130253..1130735 /locus_tag="RTM1035_05535" CDS 1130253..1130735 /locus_tag="RTM1035_05535" /note="COG4783 Putative Zn-dependent protease, contains TPR repeats" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05535" /translation="MTEPDHAYLAKLLLYYEEEIEGEAYFDALARRFPEPAQHKRLRL LAEVERHAAQGVAPLIAHYDLTPRSVESLTLSGHEQARRAPGTWAGLLDEMNRTYPAY LAAFEALEAMGPEADQTRLRFLTEHEVAALDYLALENAGAPQSYAPLERYLASSPVPA " gene 1131139..1131579 /locus_tag="RTM1035_05540" CDS 1131139..1131579 /locus_tag="RTM1035_05540" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05540" /translation="MLAFHRPAFCCALAFLGAATMAQADETAAASALTLTLNSLHTTE TGGCRLSFVLQNDLGAALDSLKAEAVLFDATGQVATLTLFDFGALPEGRPRVRQFDLA GQGCDAIGGVLINGIGTCEGAGLAPEVCLGALHLASETDIEVTG" gene 1131594..1132253 /locus_tag="RTM1035_05545" CDS 1131594..1132253 /locus_tag="RTM1035_05545" /note="COG0811 Biopolymer transport proteins" /codon_start=1 /transl_table=11 /product="MotA/TolQ/ExbB proton channel" /protein_id="jcventer:1101493006647_RTM1035_05545" /db_xref="CDD:31153" /translation="MIDRLNGLIAMGGPVIAMIAVLSVGTLAVILYKLWQFRASGVGR HHALRAAVTDWDHGETAAAHRRLATSRSYLAPVIARAFAVDPRDTVATRRLMAEAEAR FARLERGFRFLDTVAQVAPLLGLFGTVLGMIEAFQALQSAGAQVDPSLLAGGIWVALL TTAAGLAVAMPASVVLSWFESRMAEERALADHALSMVLGPDGQEARQAIPEGRAVPAC A" gene 1132246..1132623 /locus_tag="RTM1035_05550" CDS 1132246..1132623 /locus_tag="RTM1035_05550" /codon_start=1 /transl_table=11 /product="Biopolymer transport protein ExbD/TolR" /protein_id="jcventer:1101493006647_RTM1035_05550" /translation="MRKSGFQRRKLSLTSLIDVIFLLLLFFMLSSTFSQFSEVDLATA GQGQAPSEARPIFLQLRTTDLSVNARAVPLAALAEALRPLMSDETQVLVSASADVTAQ RLTDLLVALRAIPGLSVQVLVPS" gene 1132620..1133000 /locus_tag="RTM1035_05555" CDS 1132620..1133000 /locus_tag="RTM1035_05555" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05555" /translation="MKTDRTRREPTIALINIIFLMLIFFMAAATLAPPLAQDLRLVRT ADLEGTAPPDALVVHADGRLTYRGAPVSDAASHVATLPETARATLRLVPDAALPATDL LRLGEALRRAGAGRVVMITERGLP" gene 1132997..1133914 /locus_tag="RTM1035_05560" CDS 1132997..1133914 /locus_tag="RTM1035_05560" /note="COG0810 Periplasmic protein TonB, links inner and outer membranes" /codon_start=1 /transl_table=11 /product="TonB-like protein" /protein_id="jcventer:1101493006647_RTM1035_05560" /db_xref="CDD:31152" /translation="MIRGSRFVLSVCAVTALGLHGAGFWVSHRPAGPEIEGGAGASEV LLGSSFADLVAGAAQPVSDTPVTPSVTAAEVLRPTKPDGTEAQAVRPQKVHAVAKASE ALQMPVVPSAPAVTAATPATPATKDPAPAPASQPSVARPKAETGLEISKRPKARPTQL TATATPRAAPKPDRKTAARATSGSNADQTATRGSMTGHETATAATEGRPKDHQSKTPG TAATSNYPGQVMRHLARVPRPRADTRGVALVQFSISEGGRLASVRVARSSGSTRLDRA ALTVVERAAPFPAPPAGAQRSFSVQIKGE" gene complement(1133948..1135693) /locus_tag="RTM1035_05565" CDS complement(1133948..1135693) /locus_tag="RTM1035_05565" /note="COG3409 Putative peptidoglycan-binding domain-containing protein" /codon_start=1 /transl_table=11 /product="peptidoglycan binding domain protein" /protein_id="jcventer:1101493006647_RTM1035_05565" /db_xref="CDD:30614" /translation="MARILLGFIFAVFMALPAARAQEEPVVWVQVEAQPSLNAAQDAA RRYAATLADVNGFALGRGWYAIALGPYRREEAERVLQVYRAEGVIARDSYIAESSDYQ QQFWPIGANLLEGPAAPAIAAPDSPPVVAADPAPAPIPEPADETLREARESESLLDRD ARAALQEAMTWAGVYDGAIDAAFGQGTRAAMARWQAQNGFEATGVLTTRQRAELFRQF NAVFDGLGLEVVRDNATGIAMELPTAVLGFDRYEPPFAHFNATGDIDARLLLISQSGD RATLAGLYDIMQTLEIVPESGPRSLDGDRFTLIGEGALQISHTQVWLRDGAIKGFTLI WPAGDEARRSRLLGRMQDSFEWLPGTLDPAEGSGAQDIDLISGLEIRKPKQARSGFYV DASGAVLTTAEAVANCGRITIDEAYEADVVLSDADLGVAILRPRQPLAPVRVAAFQEV TPRLLSDVAVSGYSYGGLLGAPTVTFGQLAELQGLNGEAHLKRLALSALEGDAGGPVL DTGGAVLGMLLARAQDGRTLPDEVSFAATNGALQAVLTQGGITPRVTSDQDRIPAEAL TDRAGEMTVLVSCWD" gene 1135883..1136812 /gene="glyQ" /locus_tag="RTM1035_05570" CDS 1135883..1136812 /gene="glyQ" /locus_tag="RTM1035_05570" /EC_number="6.1.1.14" /note="COG0752 Glycyl-tRNA synthetase, alpha subunit" /codon_start=1 /transl_table=11 /product="glycyl-tRNA synthetase subunit alpha" /protein_id="jcventer:1101493006647_RTM1035_05570" /db_xref="CDD:29812" /translation="MSDTTGKPRSFQEIILRLQSYWAAQGCAMMQPYDMEVGAGTFHP ATTLRSLGSKPWAAAYVQPSRRPTDGRYGENPNRLQHYYQYQVLIKPSPPDMQDLYLG SLRAIGIDMGLHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVSQFTYFQQVGGHDCAP VSGELTYGLERLAMYVLGIDHVMDMPFNDPAAPIPLNYGDVFRQTEEEYSRWNFDVAN TEVLLRHFEEAEAECQATLAQEAVDPKTGKRIIMAHPAYDQCIKASHLFNLLDARGVI SVTERQAYIGRVRALAKQCADAFVQTEAGGQVA" gene 1136812..1137336 /locus_tag="RTM1035_05575" CDS 1136812..1137336 /locus_tag="RTM1035_05575" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05575" /translation="MGKILAGAILISALVAGAAMYYLQVYHFYEEVAADGTNDVLLTS LVTGAPEPVLYDNFTAIDANSSPIRYRACFTTAMSHAMLTETYELYERAEPLTAPDWF DCYDAQAIGLALEEGRALAFLGQRDVIYGVDRVVAITEDGRGYAWHQINRCGEVVFDG QPAPDDCPEPPQGY" gene 1137340..1139589 /gene="glyS" /locus_tag="RTM1035_05580" CDS 1137340..1139589 /gene="glyS" /locus_tag="RTM1035_05580" /EC_number="6.1.1.14" /note="COG0751 Glycyl-tRNA synthetase, beta subunit" /codon_start=1 /transl_table=11 /product="glycyl-tRNA synthetase subunit beta" /protein_id="jcventer:1101493006647_RTM1035_05580" /db_xref="CDD:31094" /translation="MPDLLIELFSEEIPARMQSKAADDLRARLTEALVEAGLTYAGAA AFSTPRRLALTVQGLSGQSPTTREERKGPRVDAPEQAIEGFLRGAGLTRDDLEIRDEK KGQVYFATITKPGRAAAEIVAEELDKIIRNFPWPKSMRWGAGSLRWVRPLHSILCILT DEAGEVTVVDLDVDGIRAGNTTEGHRFMAAGRFAVSSFDDYRTKLRRAHVILEAEERA AHIWQEASNQAFASGLELVEDPSLLAEVAGLVEWPVVLMGRIDDAFLGLPPEVLQTSM REHQKFFSVKNPKTGRIERFVTVANVETADQGVTILAGNQKVLAARLSDAKFFWENDL RTLQAEGLEGMGAGLAHVTFHNKLGSQADRIARIAALAREIAPHVGADADLAEQAARV AKADLQSAMVGEFPELQGLMGRYYAAEAGLAPEVAAACQEHYSPLGPGDAVPSAPVSV AVALADKIDTLTGFWAVPDEPTGSKDPFALRRAALGIIRIIIANKLRVRLSVGIDNTD SDLIEAGEFSPIECAYLGHLDLGQPNRLRSNYWRLRDFGKLIAEASMDPYNRYCKQTL LGFGKGNRVNDLLSFLHDRLKVHLREEGIRHDVIDACLAMPGNDDLTLLVQRARALSD FLKTDDGENLLQGFKRANNILTQAEEKDGVEYSYGADVKFAETDEEKALFAALATAEP AIANALKAEDFARAMGAMAALRAPIDAFFTAVQVNAESQVIRRNRLNLLSSIRNICLQ AADLGRIEG" gene 1139760..1142300 /locus_tag="RTM1035_05585" CDS 1139760..1142300 /locus_tag="RTM1035_05585" /EC_number="2.7.9.1" /note="COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase" /codon_start=1 /transl_table=11 /product="pyruvate phosphate dikinase" /protein_id="jcventer:1101493006647_RTM1035_05585" /db_xref="CDD:30919" /translation="MQQDDSHITLITPTAPMHTHTHGGRAKCLQRLVRLDLPVPRTVA LSFEAVHRIAAGELPDMARFLAPFGAAPLLCVRPSSEDPDWGGPGAVLNIGINDTRFV ELAERIGKEAASHIYLRFVQAYAIHVARLDPDVFEDVSPDPVLGLSQALKAYESEAEE EFPQDPGKQLTEVLRSMARAWEGTTARLLRQAKGAPADAGLGLVVQELALGLGQGECG SGVMQLVNGQTGARQIIGRYLSQSQGRDALSSGADAIYLTRDPRGPSLEDLAPDAFAE IRAYAELMRARLREEMQAEFTIENGKVWILDGLRVPRNGRAAVAIAVGLAEDDIISRD EALMRVEPRALNELLHRQVDPNAPRDVLARGIAASPGAATGRVVFSAAEAQAGHSRGE ACILVRRETSPEDIRGMHAAVAVLTERGGMTSHAAVIGRGIGLPCVVGASEIHFQTRR KQLTMPDGRVVKAGDVITVDGTGGLVLAGETPLLEVARDDAFQTLMSWADDVRDIAVR ANADTPADAEVARKFDARGIGLCRTEHMFFDTERLTVMREMIFADGSTDRAAVLERLL PMQRADLADLFRIMQGLPVCIRLFDPPLHEFLPTDRAGHLQLAEALDLPLSDVTRRVE ALSEYNPMLGMRGVRLGITVPEIYDMQARAIFEATLEASREGAPVVPEIMIPLVSAKR EVELVKTRVDAVAAAVRNETGRDFTYRLGVMVETPRACLRAGEFAPLVSFLSFGTNDL TQMTYGLSRDDAGRFMSEYVKQGVYPEDPFHMLDVDGVGELLKIGAERGRAANPDISL SICGEHGGNPESIAFCRDAGFTYVSCSPFRVPVARLAAAQLTVRDKMR" gene 1142515..1143075 /locus_tag="RTM1035_05590" CDS 1142515..1143075 /locus_tag="RTM1035_05590" /note="COG3773 Cell wall hydrolyses involved in spore germination" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05590" /db_xref="CDD:33568" /translation="MADAPVTRLMEQEMRALRAISGDRMARYLSSPETEISYSSTWLD QQAPAQGGPEWRCLAEALYFEARGESVKGQFAVAEVILNRVDDPNYPDSVCGVIHQGT GRKYQCQFTYTCDGHADVIAEGDAFRQVGKVARAMVDGAPRSLTSGATHYHTRNVNPR WARQFPRTASIGVHYFYRQPTRLSSN" gene 1143202..1143369 /gene="rpmG" /locus_tag="RTM1035_05595" CDS 1143202..1143369 /gene="rpmG" /locus_tag="RTM1035_05595" /note="COG0267 Ribosomal protein L33" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33" /protein_id="jcventer:1101493006647_RTM1035_05595" /db_xref="CDD:30616" /translation="MAKPTTIKIRLNSTAGTGHFYVTKKNARTMTEKMTVRKYDPVVR KHVEYKEGKIK" gene 1143441..1144025 /locus_tag="RTM1035_05600" CDS 1143441..1144025 /locus_tag="RTM1035_05600" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="possible acetyltransferase (GNAT) family protein" /protein_id="jcventer:1101493006647_RTM1035_05600" /db_xref="CDD:40669" /translation="MAGNFTQKGLPMSEILIRPVFPADHAAISDLMRAAYARHMSGTY PETLVRAALPHLTRPVPSLLFGGRYVLAEAGDEVLGIAGWSDISPFGRTCPPGQAHLR HLAIAPEWHRQGLGRALMGHLLAMAEQTGVQQMHCLCPLNAVPFCRATGFDTLGEVFL SLSPDVSLPAAQMRLELGGLPDLHPKAFVAGAAL" gene 1144049..1144438 /locus_tag="RTM1035_05605" CDS 1144049..1144438 /locus_tag="RTM1035_05605" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05605" /translation="MRAPLTLLSKLIVVFAVSLALAGVSFAHRPVDTRTLDPSYLAFI AAGGTAQDLCEDHTAHDTAPGHSDHRAAPGCEACRLVDSVLVLALPETVRTWQVPRIS PLVPGASEILAQSIAYRLQQGRAPPRV" gene 1144491..1145912 /locus_tag="RTM1035_05610" CDS 1144491..1145912 /locus_tag="RTM1035_05610" /note="COG3182 Uncharacterized iron-regulated membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05610" /db_xref="CDD:32995" /translation="MESFMTSIDPTYAPAQTRTGVNKFYFAAWRWHFYAGLFVIPFFC ILAVTGMLMLWISWIDGRDGERTPVVPQEMALAVSQQAESALAAIPGGTLKQYVAPRR DDLAAIFRVDLGDEANMVVVDPYTAAVLEIFPRRSGWYDFADGIHSNLMLGVTGDRML EIAASLGMVLIATGLYMWWPRGAGWRTALVPTFGRGRALWRSLHGVLGFWISIVLAFF LVSGLAWAGIWGEKLVQAWSQFPAEKWDNVPLSDDIHASMNHDRKEVPWALELTPMPA SGSHAGHAGVDTEAGTPVTIDTLDALARDIGFDARYQLNLPKGEAGVWTINRDSMNTD DTDPTTDRTVHVDQYTGNILADVRYEDYSLAGKAMAVGIALHMGTMGLWSVLANTVFC LAVLFLCVSSVVMWWKRRPAGAGGRLAAPPLPRDMPMWQGAVLVGIAVSLAFPMAGLT LITVLALDGLVLSRLPMLRRLVN" gene 1146662..1147129 /locus_tag="RTM1035_05615" CDS 1146662..1147129 /locus_tag="RTM1035_05615" /note="COG2001 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="MraZ, putative" /protein_id="jcventer:1101493006647_RTM1035_05615" /db_xref="CDD:32184" /translation="MDGKGRVSIPALFRRVIEASDPSWTDGLNPELIIVYGDHRRRYL ECYTIEAMQEVDAKIAALPRGSNARKHLQRLFHGQSFPTAVDETGRLVLPAKLRKKIE LEDEAFFIAAGDTFQIWKPETYEAEELSKTEEWLDEFPDDFDPLILLDNPDGV" gene 1147133..1148125 /locus_tag="RTM1035_05620" CDS 1147133..1148125 /locus_tag="RTM1035_05620" /note="COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis" /codon_start=1 /transl_table=11 /product="S-adenosyl-methyltransferase MraW" /protein_id="jcventer:1101493006647_RTM1035_05620" /db_xref="CDD:41822" /translation="MAAAAAPKSNAPHIPVLLRPLIAAVAPVQGVWLDGTLGAGGYAR ALLDAGADQVIGVDRDPLAHDMAQGWGAEYGDRLRLVLGNFAQMDDYATDLDGVVLDL GVSSMQLDLAERGFSFMKDGPLDMRMSQEGPSAADLVNTAEESDLADILYLYGEERAS RRIARAIVKARTEAPIETTLHLAGLIERCLPRSKPGQAHAATRSFQAIRIAVNDEYGA LIAGLEAAERALKEGGQLAVVTFHSIEDRIVKRFLTARSGGGGTGSRHAPEITREEPQ FTLKSRKAIGPDDEELAVNPRARSARLRVATRTDAPAGQSERAALGVPMLKGAK" gene 1148122..1148469 /locus_tag="RTM1035_05625" CDS 1148122..1148469 /locus_tag="RTM1035_05625" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05625" /db_xref="CDD:35021" /translation="MMRSILYVLTALSVIGLAFWAYRENYRTQEAQANAQALQNAIGE ARARLRVLNAEWAYLNRPDRLMDLVELNYDKLGLLPLQPYQFGRVDQVSFPKPAELPI TNPVDVSNTEQFP" gene 1148466..1150250 /locus_tag="RTM1035_05630" CDS 1148466..1150250 /locus_tag="RTM1035_05630" /note="COG0768 Cell division protein FtsI/penicillin-binding protein 2" /codon_start=1 /transl_table=11 /product="Peptidoglycan glycosyltransferase" /protein_id="jcventer:1101493006647_RTM1035_05630" /db_xref="CDD:31111" /translation="MIRTPLRPLARILEARNRGENPDAIERENLRLRHEEMRDRARRR AEGRLLVLAGVFILAFGVVGGRMGVLAGTEPSEPTTSVAGAQIFAQRADIVDREGRIL ATNFDTHSLYAQPQQMIDPEQAADKLVEIFPDLDRARLIKDFTGPRKFLWIKKKLSPE QKQAVHDIGEPGLLFGPREMRLYPNGRLAAHVLGGTSFGREGVHAAELVGVAGIERHQ DARLRDPAQAHEPLRLSLDLSVQAAMERVLFGGMKIMNAKGAAGILMDAHSGEVVAVA SLPDFDPNDRPALPTSGSPSDSPLFNRAVQGVYELGSTLKVFPVAQALDLGLINPETM INTKSPMQWGKFRIRDFKNYGPELSATKVIVKSSNVGTARIALEIGAKRQREFLDQLG FIAPVHLEIAEASGSTPLLPKNWSDLSTMTISYGHGLSISPMHLAAGYATIANGGRLV TPTLLRDPTRAPGERIITEATSAAMRRMLRQVVSEGTASLGEVPGYAVGGKTGTADKP KERGGGYHKDKVISTFASIFPAHDPKYVLVVTLDEPVETSGSEARRTAGWTAVPVAAE IIRRVAPLLGVRPEIEPSPLAVISLTSN" gene 1150270..1151751 /gene="murE" /locus_tag="RTM1035_05635" CDS 1150270..1151751 /gene="murE" /locus_tag="RTM1035_05635" /EC_number="6.3.2.13" /note="COG0769 UDP-N-acetylmuramyl tripeptide synthase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase" /protein_id="jcventer:1101493006647_RTM1035_05635" /db_xref="CDD:31112" /translation="MGQIKTLAALGLTAQAGRQANITGLAVDSREVKPGFLFAALPGT TVHGAEFIQYALRQGAGAILTDATGARLAQDFLSLSDAALVVAEDPRQTLAFAAALWF GAQPETMIAVTGTNGKTSVATFTRQIWERMGLAAVNLGTTGVEGAYSAPLGHTTPEPI TLHRMLAKCEVAGVTHGAMEASSHGLAQRRLDGVHLMAAGFTNFTQDHLDYHASFDEY FAAKAGLFARVLPEDGVAVINIDDPRGAEMAAIATERGQDLITVGRAPGADLRLIAQR FDATGQVLRFEWEDEVNQLRLDLIGGFQAENVLLAAGLVIGAGADAEQVFEVLPDMRT VRGRMQLAATRDNGAAVFVDYAHTPDAVATAIKALRPHVMGRLIAIVGAGGDRDRAKR PLMGQAAAAHADRVIVTDDNPRSENPASIRAAVMQGCPKATDVGDRAEAILRGVDALG PGDALLICGKGHETGQIVGDDVLPFNDVEQASIAVTLLDGGRA" gene 1151748..1153184 /locus_tag="RTM1035_05640" CDS 1151748..1153184 /locus_tag="RTM1035_05640" /note="COG0770 UDP-N-acetylmuramyl pentapeptide synthase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase" /protein_id="jcventer:1101493006647_RTM1035_05640" /db_xref="CDD:31113" /translation="MSLWSAKEAVAATQGRSTADWQATGVSIDTRTLKPGDLFVALNA ARDGHEFVAQALAKGAAAALVSRIPEGLPAEAPLLIVEDVQKGLEDLGRAARARSEAR VVAVTGSVGKTSTKEMLRDVLGHQGRTHAAEASYNNHWGVPLTLARMPVDTEFAVIEI GMNHPGEIAPLACMARPHVAVITTVAAAHLEAFENIDGIAKEKASIFEGLEPGGVAVI NADIATTPILRAKAAQHAARILSFGTARGAHHRLLNVELHDHVTVGHARAWRSPLVYK VGVPGRHFAMNALAVLAVAQVLGCDRAVAMADLASWAPPAGRGTREELVLDLASDGMS IDLIDDAFNANPTSMAAALEVLAAAHPRDGVGRVSRGRRIAILGDMLELGPDEAAMHA GLADLPYMARINEIHCVGPRMRALWDILPEARRGRWVASAEELAAQAHRLIDAGDVVL VKGSKGSRVSLVVEALRRVGRVTEEGQV" gene 1153184..1154266 /locus_tag="RTM1035_05645" CDS 1153184..1154266 /locus_tag="RTM1035_05645" /note="COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide- transferase" /protein_id="jcventer:1101493006647_RTM1035_05645" /db_xref="CDD:30820" /translation="MLYWLTIWSDGGDFFNLFRYITFRAGGAFMTALIFGFLFGAPLI MVLRKRQGKGQPIRSDGPEGHFSKAGTPTMGGLLIVGALVTSTLLWARLDNPYVWLVL FVTLSFALIGFADDYAKVSKQNVKGVSSRVRLGLGFLIALIAAYWAGLNHPSELQYQL ALPVFKDVLINLGFLFIPFAMFVIVGAANAVNLTDGLDGLAIMPVMIASSALGVIAYT VGRVDFTDYLGLHYVPGTGEILIFVAGLVGGGLGFLWYNAPPAAVFMGDTGSLALGGA LGAIAVVTKHELVLGIVGGLFVVEALSVIIQVLYFKRTGKRVFLMAPIHHHYEKKGWA EPQIVIRFWIIALILAMIGLATLKLR" gene complement(1154278..1154715) /locus_tag="RTM1035_05650" CDS complement(1154278..1154715) /locus_tag="RTM1035_05650" /EC_number="3.1.-.-" /note="COG1490 D-Tyr-tRNAtyr deacylase" /codon_start=1 /transl_table=11 /product="D-tyrosyl-tRNA deacylase" /protein_id="jcventer:1101493006647_RTM1035_05650" /db_xref="CDD:29648" /translation="MRALLQRVSEASVAVEGEVIGQCGRGLLILVCAMQGDTEDNAER LAAKIAKLRIFPDEAGKMNRCLTDIDGSVLVISQFTLAADTSRGNRPGFSTAADPETG QQLYLHFAKQFAQHHIPTELGKFGADMKVSLVNDGPVTIWMEG" gene complement(1154742..1155416) /locus_tag="RTM1035_05655" CDS complement(1154742..1155416) /locus_tag="RTM1035_05655" /note="COG0778 Nitroreductase" /codon_start=1 /transl_table=11 /product="nitroreductase family protein" /protein_id="jcventer:1101493006647_RTM1035_05655" /db_xref="CDD:48383" /translation="MTDNFETLQGLLQARHSCRAFRPDPVSDETILQIVTAAGRAPSW CNAQPWRVTVTRGAETERFRDALLAAVQNDHPGPDLPWPESYPGAHGARRRECGLQLY EAAGIARNDRAGRAEQSMQNYHLFGAPHVAIVQSEAALGPYGAMDTGGFVTAFMLTAT ALGVGTIAQASVAAYAPMIRAHFDLPESRLILCAISFGLPDMDHPTNTFRTSRAGLDE VLDLRG" gene complement(1155533..1156660) /locus_tag="RTM1035_05660" CDS complement(1155533..1156660) /locus_tag="RTM1035_05660" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05660" /db_xref="CDD:34262" /translation="MQNTPPPAPVTTETQHRFPCVSCGADYRYDPGQNHLICDHCGDI HAIVAGGPWKGGIKELDFERALRDQLPAQEMEEVRSTTCTSCGAQVELGADTHAAECP FCASPVVTDTGAHRHIKPRALLPFALDEATARRAMTDWLGRLWFAPNGLQDYARKGRR MEGIYVPYWTFDADTKSTYRGARGTVYYESQTIVRDGKRQTVQVPKIRWAPASGRVAR FFDDVLVLASTSLPKRFTEALEPWDLAALVPYSPEYLAGFRAEGYRVELEHGFVEARV RMDAIIARDVRFDIGGDRQQIHEIDTEVSDVTFKHILLPVWLAAYKYRGETYRFVVNG RTGRVQGERPWSAWKIAVAVVFGALIAGAVGYLIALEQGVL" gene complement(1156666..1157088) /locus_tag="RTM1035_05665" CDS complement(1156666..1157088) /locus_tag="RTM1035_05665" /note="COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05665" /translation="MRRSLTITLHWLNLMLLLFVLGDGGATVWLSLAYAASALGMCAL ALVFGLMSGPGPKLTGAVRALHPWLHRALYLLLAWGAVALAAEAMGHALPGPEARKLL LALLAATALHATFNLWRHTALGDGALRRITPRAVHHIL" gene complement(1157092..1158210) /locus_tag="RTM1035_05670" CDS complement(1157092..1158210) /locus_tag="RTM1035_05670" /note="COG4260 Putative virion core protein (lumpy skin disease virus)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05670" /db_xref="CDD:48220" /translation="MPIFDFLSGQFIDVIHWTDDTRDTMVWRFEREGHEIKYGAKLTV REGQAAVFVHEGQLADVFTPGLYMLETNNMPVMTSLQHWDHGFKSPFKSEIYFISTTR FNNLKWGTKNPIMLRDPEFGPTRIRAFGTYTVRVADAAKFLSEIVGTDGEFTMDEISF QIRNIIVQAFSRIIAGSGIPVLDMAANTADLGKLVAGEISAVVAEYGLSIPEFYIENI SLPPEVEAALDKRTSMGIAGDLGRFTQYSAAEAMTAAAKNPSGGAGIGAGLGMGMGMA MAQQMADQGPWGARPAPASAPQSPPPPPVEHVWHIAENGQTHGPYSKASMGRMVTDGK LTRDSHVWTAGQDGWKRAEDVTELATLFTVMPPPPPGA" gene complement(1158243..1159166) /locus_tag="RTM1035_05675" CDS complement(1158243..1159166) /locus_tag="RTM1035_05675" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="jcventer:1101493006647_RTM1035_05675" /translation="MGLALMVLAGCDAPAPPATSARPSVRPIVAPPEVAPGPSANSLA LASYYQRVESDLLSRGLLRRDGGGPDTPFTDTDVMRNFERIAFYDEYQQGAGYRPSSG RAGGLRKWVGPVRMNVEFGASVPEAQQADDRRLVADYAARLARVTRHPISAGGGAANF HVLFMGEDDRDAMLARIRQLAPEAGPNTIGIFRDMPRTIHCLVVAFSGQGEDHVYRRA IALIRAEHPPLMRQSCVHEELAQGLGLADDFPGARPSIFNDDDEFALLTSQDEELLWL LYHPDLKPGMTPDEARPILRRLLDARAGGPV" gene complement(1159204..1160403) /locus_tag="RTM1035_05680" CDS complement(1159204..1160403) /locus_tag="RTM1035_05680" /note="COG3853 Uncharacterized protein involved in tellurite resistance" /codon_start=1 /transl_table=11 /product="tellurite resistance protein" /protein_id="jcventer:1101493006647_RTM1035_05680" /db_xref="CDD:45711" /translation="MSETTRQKAEAVLKDVEAVSRAVLPVPSEANAIVPLDQADAPQS AEITRRMAEIDMGDTQSIVSFGSAAQAELQEISQSMLQGVRNKDVGPAGDSLRGIVTT IRGFAVSELDVRRERSWWEKLLGRAAPFAKFTARFEQVQGQIDKITDDLLAHEHTLLK DIKSLDMLYEKTLAFYDELALYIAAGEAKLKDIDTNDIPAAEAAVQAAPENDQVMKAQ ELRDLRAARDDLERRVHDLKLTRQVTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLW ETQLAQAVTIQRSAEAAAAVRDANDLTNELLTANAKNLRESNKMIRQEMERGVFDIEA VKQANADLIGTIQESLQIADEGKAKRAKAEEELKKMEADLRDTLASAKARRDGVGDTA GTAVPKG" gene complement(1160417..1161319) /locus_tag="RTM1035_05685" CDS complement(1160417..1161319) /locus_tag="RTM1035_05685" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05685" /translation="MAQRFGGKYSPDGADKGAPVPDHGAFRGARRTRAGGRVNLLFFA PLPLAARAFGAGPVELALNLAALGTLLLAAWLTREGILAQEAYEARKIARRPAIPRKI FASGLTGLGLGLAGYASGGGVMEPLIYATLGAVLHSFAFGLDPLKDKGMEGVDSFQTD RVARVVDQAEDYLRGMTEALKRAGDRQAETRLERFQITVRDMLRTVEDDPRDLTAARK YLGVYLMGARDATVKFADLHARAPNPAARDKYLALLGDLEQNFTAKTRALMQDSSTDL DIEIDVLRDRLEREGVHLETKDLA" gene complement(1161319..1161426) /locus_tag="RTM1035_05690" CDS complement(1161319..1161426) /locus_tag="RTM1035_05690" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05690" /translation="METGCGGAMSDTGLQKLAFLLLVALILFVAATGGV" gene complement(1161541..1161933) /locus_tag="RTM1035_05695" CDS complement(1161541..1161933) /locus_tag="RTM1035_05695" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05695" /translation="MRVLLLFSLFFAVAAPAVAQMTAAEFDAYTRGQTFYYGAGGAPY GGEEYLPDRRVRWSFLDGECQDGHWYEERGLICFVYDNRPEPQCWSFERTDKGLIARF AGDESLSELYEVRRSEAPLMCLGPKIGV" gene complement(1161938..1163053) /locus_tag="RTM1035_05700" CDS complement(1161938..1163053) /locus_tag="RTM1035_05700" /codon_start=1 /transl_table=11 /product="alkane-1 monooxygenase, putative" /protein_id="jcventer:1101493006647_RTM1035_05700" /translation="MGCGKETLCAAPAPVYTAGKLGPLMPLFSIAASLPLILTALAAL WGGVWGVLALGTITVLVFTLDRVIAADGNTHPEAEFPAADAVLVGLGLGHFVVLALAI WAVAGGHDLSGTERALVALSAGLSMGQISHPVAHELIHRPARAKRWLGRLIYTSLLFG HHVSAHLRVHHVHVASPEDPSSARPGEGFYRYALRAWPGAFQAGLKAESRRHADRPLW QHPYLIYLGGAGALVSATALSLGAAGVAALFFIAGYAQVQILLSDYVQHYGLRRAQRQ DGRLEPVGPQHSWNAPHVMSAAMTLNAPRHSDHHVTPQRPYPALQLDSATMPVLPQSL PVMAVLALVPPLWRRIMDPRAARWRKTSGGAAPDLAG" gene 1163157..1164863 /locus_tag="RTM1035_05705" CDS 1163157..1164863 /locus_tag="RTM1035_05705" /note="COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit" /codon_start=1 /transl_table=11 /product="formate dehydrogenase, beta subunit" /protein_id="jcventer:1101493006647_RTM1035_05705" /db_xref="CDD:32078" /translation="MIAMALDDRKGVWKSGDGKGRRTTKGRQLEDGAWAEVQALLGEG PRRRDLLIEYLHRIQDKFGHLSAAHLRALAEELRLSQAEVYEVASFYAHFDVVREGET PPPALTIRVCDSLSCELAGAQALKSALEQGTDPMQVRILRAPCMGRCDTAPVVELGHH HIDHATPESVLAAVAAGDTHAHVPAYEALDAYRTAGGYATLADLRATRNADAEFERVQ QTLLDAGLRGLGGAGFPSGRKWGFVRAEPGPRYLAVNGDEGEPGTFKDRYYLERTPHL FLEGMLIAAWAVEAERCFIYMRDEYPAVLDILATEIAALEAADLIKPGYVELRRGAGA YICGEESAMIESIEGKRGLPRHRPPFVAQVGIFNRPTLVNNVETLLWVTRILREGPEI LNTVELNGRKGLRSYSVSGRVKNPGVHLLPAGSTITDIIAAAGGMLDGHTFKAYQPGG PSSGLLPASMHDVPLDFDTLQPHGTFIGSAAVVVLSDHDRARDAALNMLRFFEDESCG QCTPCRVGCEKAVKLMQADTWDQPLLTELCTAMSDASICGLGQAAPNPIRLTMKHFAD EI" gene 1164933..1166144 /locus_tag="RTM1035_05710" CDS 1164933..1166144 /locus_tag="RTM1035_05710" /note="COG0552 Signal recognition particle GTPase" /codon_start=1 /transl_table=11 /product="signal recognition particle-docking protein FtsY" /protein_id="jcventer:1101493006647_RTM1035_05710" /db_xref="CDD:30898" /translation="MAFFSKLKERLFKSSSKLEEGLEAIVDEGRADESAQESTPDRTP QTPPQTPPETPPSVPPPPSEVPAPTPQEAPVAPAPQEVPAPPTEGTAPPPPPELPQDL PAAAPRSGILGRLLGRTAPDSAPRRVLDDAMLESLEELLIAADMGVDTALRVTANMAE GRMGKRLSTQEIKELLAQEIARIMEPVARPMPIYAKRPQVVLVVGVNGSGKTTTIGKL AAQFKGAGKSVVIAAGDTFRAAAVEQLQVWGQRAGVPVMTAPEGSDPASLAFDAMTRA EAEGADLLMIDTAGRLQNRADLMEELAKIVRVIRKKDPSAPHNTLLVLDATTGQNALS QVATFQKLADVSGLVMTKLDGTARGGVLVALADKFGLPIHAIGVGEQIDDLAPFDPQD FAAALTGLEGK" gene 1166221..1167123 /locus_tag="RTM1035_05715" CDS 1166221..1167123 /locus_tag="RTM1035_05715" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05715" /db_xref="CDD:32259" /translation="MSAWLISLEGTEAGHQLAMALALLAALLHAIFGALQKGRHDPWL SRGVIDASYATMAAPFALFVVPWPEAHMWPIFAGAVVIHIGYKVLQAMAYTRGAYTVV YPVVRGTGPLFTVIGAYAIFGEVFTPVQWLGVGVLLCGIYGLAVYNLRTLTLNRDTMP LALGLAVATGLFVALYTTYDAYGIRATADPFTFLAWFFFLDGLTIPPFAYLRWRNMPE RPAVGPLMLRGVTGGVVAFFSFGSIMLATRLDKVGEAAVLRETSTVFAALIGWLVLKE TVGPRRIALMSLIAAGAVIVEIGG" gene 1167165..1167776 /locus_tag="RTM1035_05720" CDS 1167165..1167776 /locus_tag="RTM1035_05720" /note="COG2917 Intracellular septation protein A" /codon_start=1 /transl_table=11 /product="Intracellular septation protein A" /protein_id="jcventer:1101493006647_RTM1035_05720" /db_xref="CDD:44192" /translation="MDDTQPPKWAKPILEFGPVLGFFAAYLWLKDRVFTIGGTEYEGF IVVTAGFIPVFLISMGLLWRLTGHLSRMQVVTAVLIVVFGGLSVWFNDPRFFKMKPTM IYLLFGGVLGYGLMRGRSYLQYVMDGVMPLTDAGWMILTRRLMLFFFGLALLNEAIWR TQTEEIWVYFKTFGLTAAIFVFFMAQGALFRDHSTEETDTKGT" gene complement(1167811..1168032) /locus_tag="RTM1035_05725" CDS complement(1167811..1168032) /locus_tag="RTM1035_05725" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05725" /translation="MANITTNVSASPLREGWKRFVAALVRGLEKQASVTARRNRIEAL EAKSDAELARMGLRREDIVYHVFKDLFYA" gene complement(1168155..1168751) /locus_tag="RTM1035_05730" CDS complement(1168155..1168751) /locus_tag="RTM1035_05730" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05730" /translation="MLSPEIPLKLSAAGIRLTGFMVENQLRVAQVYCEAFLKTGIWSR SLTAKAAVPATPVKTKAAPKPKVADANAKPRRAARAAVAPVAPATPAKAAAPVTPPVQ QVAAPAAPAVAAKPAPLTEVKPAVQPVPMAAPKPAPVAEAALAPKPVAPATSAAPTAA QTTSQPTARVIPVDAGAPKRQPSPPPAMPQGTPKAKAK" gene complement(1168919..1170019) /locus_tag="RTM1035_05735" CDS complement(1168919..1170019) /locus_tag="RTM1035_05735" /note="COG1469 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05735" /db_xref="CDD:42612" /translation="MNVHPSEMKPAPDRDEAKEALALLRSWARAASPEEVADLDPAIA RLLPSGEVANYPLLAREYPESFATSAAYLASLPDLQNGPASLIRGTRQQLQHVGISNF RLPIRYHTRENGDLTLETSVTGTVSLDAGKKGINMSRIMRSFYKHAEKTFSADVMEAA LSDYITDLDSVDARLQMRLSYPARVRSLRSGLEGYQYYDIAMELVKNAGVTRKFMHLD YVYSSTCPCSLELSEHARSARGQLATPHSQRSVARISVELVEDDCLWFEDLIELARRA VPTETQVMVKREDEQAFAELNAANPIFVEDAARLFCEQLLADPRIGDFRVVASHQESL HSHDAVSVLTEGETFAAQSLDPRLFQTLIHGR" gene complement(1170158..1171342) /locus_tag="RTM1035_05740" CDS complement(1170158..1171342) /locus_tag="RTM1035_05740" /note="COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases" /codon_start=1 /transl_table=11 /product="O-succinylhomoserine sulfhydrylase" /protein_id="jcventer:1101493006647_RTM1035_05740" /db_xref="CDD:30971" /translation="MSETWQKRTKLVHGGTRRSQYNEVSEAIFLTQGFVYDSAEAAEA RFIKAGADEFIYARYGNPTVAMFEDRIAALEGAEDAFATASGMAAVSGALTSLLRAGD HVVSARALFGSCLYVLEEILTRFGVEVTFVDGTDLEQWRAAIRPGTKAVFFETISNPT LDVVDIRSVAELAHAAGALVLVDNVFATPVFSRAIEQGADVVIYSATKHIDGQGRTLG GVILGTRDFIRGTVEPYMKHTGGSMSPFTAWVMLKGLETIDLRVRAQTASAQAIAEAL HGDARLARVIYPGLSSHPQHDLVRAQMGEGGTVLALDLKGGQEAAFRFLNALEIVVIS NNLGDAKSIVTHPATTTHQRLPAAQKAALGITPGLVRLSVGLEDCGDLIRDIQNALEA AF" gene 1171589..1172530 /locus_tag="RTM1035_05745" CDS 1171589..1172530 /locus_tag="RTM1035_05745" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006647_RTM1035_05745" /db_xref="CDD:45882" /translation="MPLIHVNTGPTGPVLHDGAGDPALALPGLLRGRGPVILMVHGFK YAPHHATECPHDHIFSLAPERRCFKVRSWPAGLGFGTGAVDEGLGIGFGWPARGNIWR AYAEAAKAGAQLAQLITMIRAVRPDRPIHAVAHSLGARVVLSALAHLPKGALRRLILL AGAEFGQRAAAALDTPAGRGVELINITSRENDFYDFLLECLIPAPRRGDRSLGLALPA GPNVLNLQMDHPGTLAVLARLGFAIAPPAARICHWSPYTRPGVFTLYSSLLRRGPDLP LCAFRAALPCVPEPRWSRLLTLPELRLPLPMGRKPSF" gene 1172559..1173218 /locus_tag="RTM1035_05750" CDS 1172559..1173218 /locus_tag="RTM1035_05750" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /protein_id="jcventer:1101493006647_RTM1035_05750" /db_xref="CDD:48105" /translation="MPAPIDLYYWPTPNGWKISIALEEMGLPYRCHLIDIGAGDQHAP DYLKISPNNRIPAITDPEGPDGAPIHIFESGAILQYLARKTGQFYGNTARDHIAVDQW LMWQMGGVGPMAGQAHHFLKYAPQDIPYAKDRYRSEVGRLYGVLDRQLAQSKFVAGDF YSIADMALWGWCSLWEGQQQTLEDKPHFARWLDTLGARDGVQRGRALHADKRRDPTAR K" gene complement(1173224..1174723) /locus_tag="RTM1035_05755" CDS complement(1173224..1174723) /locus_tag="RTM1035_05755" /note="COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase" /protein_id="jcventer:1101493006647_RTM1035_05755" /db_xref="CDD:32210" /translation="MSTGISRRYFLGTALAALGSSAMAGPPAVSLRPVARPDGGARRA VQRAPTAEALISQANLSGRVGYAVADARTGQLLESGDATTGLPPASVTKAVTALYALD ALGPEHRFGTRLIATGPISGGVLNGDLILAGGGDPTLDTDGLASLAANLAKTGLREVR GRLLVWGGAVPFTRAIDETQPEHAGYNPALSGLNLNYNRVHFEWRRANGKYAITMDAR SDRYRPDVTMARMRIADRNVPVYSYKDAGSYDDWTVALGALGTGGARWLPVRKPELYA GEVFATFARSQGIKTGAPQVIDRLPGGTAIVTHASAPLATILRDMLKFSTNLTAEMVG LAASAKRRGAVVALDQSAQDMNAWAAQALGMTGAALRDHSGLSDRSRLSAAAMTQALA RAHRAGLLRPLLRTVELRDAQGRPNRNHPLKVAAKTGTLHFVSALAGYVTTPQGADLA FAIFTASDSLRARIDPSQDDSPPGARSWNTRSKQLQQSLIERWGAVYGG" gene complement(1174782..1175471) /gene="nadD" /locus_tag="RTM1035_05760" CDS complement(1174782..1175471) /gene="nadD" /locus_tag="RTM1035_05760" /EC_number="2.7.7.18" /note="COG1057 Nicotinic acid mononucleotide adenylyltransferase" /codon_start=1 /transl_table=11 /product="nicotinic acid mononucleotide adenyltransferase" /protein_id="jcventer:1101493006647_RTM1035_05760" /db_xref="CDD:28827" /translation="MVCASADQRAPRISLYTARAAGNERAMTHALPHSRPGQVIGLLG GSFDPPHAGHLHISREALRRFGLDRLWWLVSPGNPLKAHGPAPLAQRMAAAQALVEHP RIDVTDIEAWTGTRHTAATLRALRRICPGVRFVWLMGADNLAQFHLWQDWREILDTVP VGVLARPGQRISARLSSAARIYAHARLPDYDSQALGRRDAPAWCFVNVPMMDISSTRL REAGSWTGAQK" gene 1175545..1177200 /locus_tag="RTM1035_05765" CDS 1175545..1177200 /locus_tag="RTM1035_05765" /note="COG0488 ATPase components of ABC transporters with duplicated ATPase domains" /codon_start=1 /transl_table=11 /product="fused predicted transporter subunits of ABC superfamily: ATP-binding components" /protein_id="jcventer:1101493006647_RTM1035_05765" /db_xref="CDD:30834" /translation="MAAYQYVYHMQGVSKAYPGGKKCFENIHLNFLPGVKIGVVGVNG SGKSTLMRIMAGMDKDFTGEAWAAEGARVGYLPQEPHLDDSLDVRGNVMLGVAEKKAK LDRFNELAMNYSDETADEMAQLQDEIDSQNLWDLDSQVDISMEALRCPPDDASVASLS GGERRRVALCKLLLEAPDMLLLDEPTNHLDAETIAWLQQHLIAYKGTILIVTHDRYFL DDITSWILELDRGRGIPYEGNYSAWLEQKAKRLLQEAREDKSKQKTLERELEWMRQGA KARQAKQKARINAYNELAGQSERERISRAQIVIPNGQRLGNKVIEVEGLKKHMGDKLL IEDLSFSLPPGGIVGVIGPNGAGKSTLFKMLTGQEQPDEGKIELGDTVQLSYVDQSRD DLKPEDNVWEAISGGAEVIVLGDAQINSRAYCGAFNFKGGDQQKKVSLLSGGERNRVH MARLLKEGGNVLLLDEPTNDLDVETLRALEDALMDFAGCAVVISHDRFFLDRICTHIL AFEGDAHVEWFEGDFSAYEEDKKRRLGPDALEPKRVKHKKFVR" gene <1178020..1178376 /locus_tag="RTM1035_05778" CDS <1178020..1178376 /locus_tag="RTM1035_05778" /note="COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05778" /translation="TITIGGDQDDPKITITGDAEPGSEVDVTIGDQTVTTEADEDGKW EVVFEDETFPEDGEHDVVVVVTEPDGTETTLEGPVVVIDTTPPEVVIEDGVVSTDDIV NPTGGASPDPRHKTFT" gene 1178407..1179246 /locus_tag="RTM1035_05783" CDS 1178407..1179246 /locus_tag="RTM1035_05783" /note="COG0640 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator/arsenate reductase" /protein_id="jcventer:1101493006648_RTM1035_05783" /db_xref="CDD:30743" /translation="METLAPTRLATLGHPQRLAIFRLLMRRYPDRIPAGELAEILHLK PSTLSAYLAALMQAGLVRQERAGTSLRYSIDMTEVRRTFDYLFNDCCRGRPDICAPFP TLKGGPDMAHRTYSVLFICVGNSARSIFAETILRDLAGDRFTVFSAGTRPYSELNPFA LKVLRAKGHDVTPLRAKNVSEFTGPDAPALDFVFTVCDTAANEECPAWEGQPVSAHWG MPDPVKVEGTEAQKSLAFQQAYGALRNRITAFAALPISTLDRVSLQAAVDDIARQDVG QGT" gene 1179243..1180241 /locus_tag="RTM1035_05788" CDS 1179243..1180241 /locus_tag="RTM1035_05788" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase, type I" /protein_id="jcventer:1101493006648_RTM1035_05788" /db_xref="CDD:30406" /translation="MTVYAINGLGRIGKLILKPLIARGAKIAWINDAVGDAAMHAHLL EFDTVHGRWDASFDHDEGAVIIDGLRLPFIGARDLSNLPLTGVDVVIDCTGVYKTEAK LAPYFDAGIKKVVVSAPVKDGDAANIVYGVNHAVYEPARHRIVTAASCTTNCLAPVVK VLHEAIGIKHGSITTIHDVTNTQTIVDRPAKDLRRARSALNSLIPTTTGSATAITLIY PELKGRLNGHAVRVPLLNASITDCVFEMERETTVEEVNALFQAASEGPLAGILGYETR PLVSADYTNDTRSGIVDAPSTMVVNGTQVKVYVWYDNEMGYAHRLVDVACMVGDSL" gene 1180301..1181500 /locus_tag="RTM1035_05793" CDS 1180301..1181500 /locus_tag="RTM1035_05793" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05793" /translation="MLSDGALRMLVLLHFHTLGFSPVQLAYLFVLYEVAGMVTNLSAG WIAARFGLTATLYAGLSLQVVALIALAQLDPAWSIALSVAFVMGVQGVSGVAKDLAKM SSKSAVKLLAPSEEGGLFHWVAVLTGSKNAVKGLGFLLGAALLAGIGFVGAVWAMAGV LAAILVAVAWAMPPGLPRGRKGAKFSEVFSKSANVNWLSAARVFLFGARDVWFVVGIP IYFYGVLSDGSEAGNRAAFFLIGTFMAGWIILYGAVQASAPKILRAKSRPEAALIAAA RGWAIALCLVPAVLTALALLAGGPQAWLTGALVAGLLVFGAIFAVNSALHSYLILAFT RAERVTMDVGFYYMANAGGRLLGTLLSGLTYQLGGLPLMLGIATAMVALSALAAGKLT PQERAEA" gene 1181497..1182504 /locus_tag="RTM1035_05798" CDS 1181497..1182504 /locus_tag="RTM1035_05798" /note="COG0798 Arsenite efflux pump ACR3 and related permeases" /codon_start=1 /transl_table=11 /product="Bile acid:sodium symporter" /protein_id="jcventer:1101493006648_RTM1035_05798" /db_xref="CDD:31141" /translation="MSGFERYLTVWVGLAMAAGVILGLIAPGLIAAIAAAEVARVNLI VAALIWAMVYPMMIGVDPSSLGQVARQPKGLAITLVVNWLIKPFSMAALAVLFFEGVF ADLIAPADAQQYIAGLILLGAAPCTAMVFVWSQLTKGDESYTLLQVSVNDVVMVFAFA PLVAFLLGVTDIVVPWETLVLSVLLFVALPLVAGLLTRRRLGSEVRIAAFQARVKPWS ILGLIATVMILFGLQGRVIVERPMVIGLIAVPIILQSYGIFALAYAAAWLLKVPHRIA APCALIGTSNFFELAVAVAISLFGLNSGAALATVVGVLVEVPVMLSLVALANRTRARF A" gene complement(1182570..1182959) /locus_tag="RTM1035_05803" CDS complement(1182570..1182959) /locus_tag="RTM1035_05803" /note="COG3474 Cytochrome c2" /codon_start=1 /transl_table=11 /product="cytochrome c family protein" /protein_id="jcventer:1101493006648_RTM1035_05803" /db_xref="CDD:33277" /translation="MKTLLAASATLVALSFPAFAAGDAAKGEKEFNKCKACHMIASES ETIVKGGKTGPNLYGVIGRTAGSVEGFSYSDGLAAKGAEGLVWDEAELAAYVADPNEY LGSRSKMTFKLAKGAEDVAAYLATFSQ" gene complement(1183056..1183739) /gene="lipB" /locus_tag="RTM1035_05808" CDS complement(1183056..1183739) /gene="lipB" /locus_tag="RTM1035_05808" /note="COG0321 Lipoate-protein ligase B" /codon_start=1 /transl_table=11 /product="lipoyltransferase" /protein_id="jcventer:1101493006648_RTM1035_05808" /db_xref="CDD:30669" /translation="MRLKTPFAIDQSGVEWHISTDLVPYPEAVAAMEERVARIAEGSA AEAIWLLEHPPLYTAGTSAKPADLTDPDRFPVYEAKRGGQYTYHGPGQRVVYIMLDVG KRGRDVRCFVRQLEKWVIATLAEFNVTGEIRAGRVGVWVTRPDKPLTATGQQAEDKVA AIGIRLRKWISFHGISINVEPDLEHFSGIVPCGISEHGVTSLVDLGLPVSMDDLDVAL RRCFSKAFD" gene 1183821..1185164 /locus_tag="RTM1035_05813" CDS 1183821..1185164 /locus_tag="RTM1035_05813" /note="COG3409 Putative peptidoglycan-binding domain-containing protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05813" /translation="MFSKRILMMALAASVALPVGVAQADFKDGLVGGLVGGAVSGIIV NESAKARERKQQTTTTTRRVYQAPAPVNSVQRQQVREEQSALNYFGFPAGTPDGVRGR NTRDAAAQFQAHMGYPPTGYLADYERQFLISSYYRAQSSGAATAQLIAQRGQGTRGLL LAYRDEAVGVPTYAAAPVQAPTAPSPVMAAIPQSAQVSAPTAETAPAAVGFAALPNLM ASGGEGPSLASHCNQVSLITNSNGGFVTEASLNDGRIALNEQFCLARTYAIAEGETMA ASLKGVTAAQLEEQCRAFEPAMRDHVAALSLNSRDEVVQQVRSFVLQSGQSPAQLAGT AKICLSVGYRIDNMNVALGSGLLLTALGEEPYGELMGHHLNEGFGTTRRPDLALAWYQ TAVEAVERGVEPVFAPGNTGRTALLRKAAFHTQSAQTGAAEAVQPVATLPTFKLE" gene 1185265..1185348 /locus_tag="RTM1035_t07490" tRNA 1185265..1185348 /locus_tag="RTM1035_t07490" /product="tRNA-Leu" gene complement(1185578..1185973) /locus_tag="RTM1035_05818" CDS complement(1185578..1185973) /locus_tag="RTM1035_05818" /note="COG3824 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05818" /db_xref="CDD:46153" /translation="MTAPDPDLASFEDMARAAFAALPPAFSPAAQSVVLIVEDWPSAT LLHEMGIDDPLDLTGLYEGIPLTEKSHFDQPLGPDTIWIFREPILEEWRDRGDIDLAD LVTHVVVHELAHHFGWSDEDIARIDRWWE" gene complement(1186028..1186882) /locus_tag="RTM1035_05823" CDS complement(1186028..1186882) /locus_tag="RTM1035_05823" /note="COG0491 Zn-dependent hydrolases, including glyoxylases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05823" /db_xref="CDD:30837" /translation="MNTPARAAAPMLGASTTRYNRVTLGDFEVTTLLAATTARPDPQT IFGLNVSAEEFAAVSAANNIPTDQAQFFFTPTVINTGAELVLFDTGLNPDAITSALAA AGYTPDQVDVVVLTHMHGDHIGGLMGESGATFPNARYVTASAEYDHWAAAGNEGFDSK MRPLAEKTEMIGDGASVASGITAMSAAGHTPGHTAYMIESGGKSLVIAADFANHYVWS LGYPDWEVTFDMDKAQAAATRRKVLGMLAADKVPFIGYHMPFPAVGYVETRGDGFQYV PASYQLMV" gene 1187211..1188536 /gene="gltX" /locus_tag="RTM1035_05828" CDS 1187211..1188536 /gene="gltX" /locus_tag="RTM1035_05828" /EC_number="6.1.1.17" /note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /protein_id="jcventer:1101493006648_RTM1035_05828" /db_xref="CDD:30358" /translation="MITTRFAPSPTGYIHVGNLRTALMNYLIARRAGGTFILRIDDTD AERSKEAYVDALKQDLEWLGLHWDRIERQSLRLDRYAEAADKLRSMERFYEAFETPTE LDLKRKKQLNMGRPPVYDRAALALSEADKDKLRAERGNGVWRFKLIQERIEWHDGILG DISIDAASVSDPVLIRGDGQVLYTLASVVDDVEMGVTHIVRGSDHVTNTATQIQIIEA LGATPPQFAHHSLLTGPQGEALSKRLGALSLRDLRAQGIEPMALLSLMARLGSADPVE LRTEMAQLIEGFDIERFGSAPTKFDETDLFPLTARHLAALPFSAVASKIADIGVPASL APQFWDVTRENITTLKDLDGWWALFRDGADPVIEDEDREFVAQAMTLLPEGPHDAGTW GTWTSAVKEATGRKGKGLFMPLRKALTGQAHGPEMAQVLPLLQVIKARG" gene complement(1188520..1189782) /locus_tag="RTM1035_05833" CDS complement(1188520..1189782) /locus_tag="RTM1035_05833" /note="COG4325 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05833" /db_xref="CDD:34047" /translation="MKIHILSTTALSLLRLSRKLWLRVTLFALLAILASGAAILLEDQ IPNSLKARFTPDAVMPILTILASGMLAVSTFSLNVMVTAHNAAAGQTTPRVHAILLAD TTTHTVLATFIGAFVYALSAIILFQAGFYPEGASVLVLVFTVAVVVLVVVALLRWIHH LSDLGSMDATLFAVEQAARDSLIRDRSLPSLGAQRLSEDTVLPDEACPLTAPQTGYLQ LIDMHAISEKLGTDQTRVYLYVRPGAYLVRGQTIGHASGLAEDERRAICQNLTIAATR SFEQDASYGLLVLSETASRALSPGINDPGTAIAVLCRQEKLLLDWAYATHAEDSPRFP RLFLPETSRVAMIDTAFASVARDGAGQIEVALRLQQVLARLASVPDATLAQAAREMSQ HAREYAETALTVERDKTRLRAAVLSPSP" gene complement(1189796..1190419) /locus_tag="RTM1035_05838" CDS complement(1189796..1190419) /locus_tag="RTM1035_05838" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05838" /db_xref="CDD:44659" /translation="MKQPRGHDPDQDRGKTVIGNSYFFGYGSLVNRASHSFEAAIPAQ LTGWRRIWRHTTLRPVAYLTVVPDPEAEIDGLIAPVPDADWPALDAREAAYIRAPAAH QVRHPLPHAPDIAVYTIPDGLHAAPSHAHPILLSYLDVVVQGYFREFGAAGVQRFFDT TQGWDAPLLDDRSAPRYPRHQPLTAVERALTDQHLERLGVSILARDR" gene 1190458..1190910 /locus_tag="RTM1035_05843" CDS 1190458..1190910 /locus_tag="RTM1035_05843" /note="COG1959 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="rrf2 family protein" /protein_id="jcventer:1101493006648_RTM1035_05843" /db_xref="CDD:32142" /translation="MRITKRTNIAIRLLMFCAANSDRLVTKAEIAERCNISESHLAQV INRLSQLGFLYTQRGRTGGVRLGRPMSQITVGDVFRQLEQHTPVAECFADVDNTCPLT KACRLRVALVDAVEAFYAHLDEVTLDALVCNNDALFAIFSTVPCLKQA" gene 1191174..1192319 /locus_tag="RTM1035_05848" CDS 1191174..1192319 /locus_tag="RTM1035_05848" /note="COG0404 Glycine cleavage system T protein (aminomethyltransferase)" /codon_start=1 /transl_table=11 /product="glycine cleavage system T protein" /protein_id="jcventer:1101493006648_RTM1035_05848" /db_xref="CDD:30753" /translation="MKKGRMRMSDLQITPLNALHRELGAKMVPFAGYDMPVQYPMGVM KEHLQCRAKAGLFDVSHMGQVILRAPGGYAAVAEAMEALVPVDLLGLGVMRQRYGMFT NDAGGILDDLMLANRGDHMFVVVNAACKAADIAHMRAGLMGVEVEEITDRALLALQGP AAEAVLAAIVPDVAAMRFMDVGIFASEFGELWISRSGYTGEDGYEISVIEDQAVSLAR CLLAHEDVAPIGLGARDSLRLEAGLCLYGHDIDTGTTPVEASLSWAIQKVRRSGGARA GGFPGEDRILKELHEGASRARVGLRPEGRAPMREGTPLFAAAEGGEAIGHVTSGAFGP TIESPMSMGYVPQGLAAEGTELYGEVRGKRMPVRVAKLPFTPATFKR" gene 1192340..1192699 /locus_tag="RTM1035_05853" CDS 1192340..1192699 /locus_tag="RTM1035_05853" /note="COG0509 Glycine cleavage system H protein (lipoate-binding)" /codon_start=1 /transl_table=11 /product="glycine cleavage system H protein" /protein_id="jcventer:1101493006648_RTM1035_05853" /db_xref="CDD:30855" /translation="MKFTEEHEWLRVEDDVVVVGITEHASEQLGDVVFVDLPEVGTEV SKDDEVVVIESVKAASDILAPIDGEIVEVNDALIDNPGKVNEDPMGDAWFFKIKPADP SQMDDYMDEAAYQAHIA" gene 1192772..1192849 /locus_tag="RTM1035_05858" CDS 1192772..1192849 /locus_tag="RTM1035_05858" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05858" /translation="MHIDLGVVYYRMFDIHHLINVVLSI" gene 1193250..1193894 /locus_tag="RTM1035_05863" CDS 1193250..1193894 /locus_tag="RTM1035_05863" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05863" /translation="MLIASLIKAWKGFDLKSLAFFEDLLSEQYQVLNNGLADAVLGAA LAYVLTSYLMIENTHERGLDVLGHPSALAKKLDKATRLLLIGILSLKLFIPVNADHLL FIIFGISALIFFNGWTLNLTGPISVMINGRNAGYFVSLDFFCLFISLLTLVLIQVRSA WPYALLNYALLLLLTLFAIIVAGGSILRFWAHKSVLRALTVSLIDEPRIQQNKS" gene 1194240..1195484 /locus_tag="RTM1035_05868" CDS 1194240..1195484 /locus_tag="RTM1035_05868" /note="COG0591 Na+/proline symporter" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05868" /translation="MGLGALAGPLGVLVGFALLAKLEGVISLYKDNSGVAPRNYANFL SNTSHFTKISFVFNLVRLLVFMCLIAFEIWLSSKYLSAIFGFGPDGALVYASATILGC MAIGYSVIGGFPAALKTDYVQAFTVLLLILFLLFAGFSQPGLQQSQTSIATLLESTPA TTLPWLLATLAVFATAVATQFYNIINTSASRNRSSEENNSSFLVVGFLQATVIFLILI IGVVFSSNQGGQDLVAFFGQQASGTSMLDGVLAALILIGLTSIIFTTVDSAIVSLAQL SGDLLGLDCDSAEDAIWPRLLSGLIGFFTIPFTIWLVYMNFPIMDVVFVILTPLGAMA AYLAASIFVAVKKRKQKSNLWADISCAFFVIAVSASQLANLFELPEGYLGAYTLVSFV PAVLILAYGLFIKKTRGNTAAQ" gene 1195882..1196322 /locus_tag="RTM1035_05873" CDS 1195882..1196322 /locus_tag="RTM1035_05873" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05873" /translation="MVGALGAIFLVALALWGQKASPRLWDAFYSYFSGGQIGLTILSV GGVTFIALLRHKPTHPILAVLLYIFLFGPMVITAFLIGLNPGFIPNGLSQDVLRWLWW IFFGLHALWFFTLLLEPVIPNAQEAGEAQEKRVRDIKARAVDRA" gene 1196315..1197535 /locus_tag="RTM1035_05878" CDS 1196315..1197535 /locus_tag="RTM1035_05878" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05878" /translation="MLNELKLPITFPVSKVSQPIGDFYVGRLDARTLVKISYTEIRAF LEGTQETIAGIQRERSEKRIKEIEKYVNLDYATFPTSIIIAVSADCVQLLPYNSAADA VVRGEQEEEIELDPRARVFSLQLMPFGNPGDEDFVPVEKIAFIIDGQHRVAGLEGLED GREFDVNVSVFVGASDADKAEIFARVNQAQTKVNQSLVVDLASYYEERGPVKFAHEVV LAMNRDREGPFHDKVKRLGKADPGKGRIQTLAQATVVKPIVDYITADPEVERNKRYRG IFGSRRKSDEWRRFIFQPFFDEDDDSGVFLCLTNYFGAVKAKWPVAWDDAPPGVILNR TTGYAALVRFLRPVYLNNCDVPGQILTREACDRVFQNINIDAADLNKDEFVPGSSGIS KLYRSLMSEMGWET" gene 1197537..1198277 /locus_tag="RTM1035_05883" CDS 1197537..1198277 /locus_tag="RTM1035_05883" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05883" /translation="MSIFEGLITAGFDVAIRNHAGAILTVDFPDIAEELEDALLEVRI PAEELIGSGGGEAQSTQRLRRRLYEAAWPKHHFDFKLIVDGIETVAMSHEIDHVRRAD GGTIALEIEWNNKDPFFDRDLENFQRLHAQSAISVGVLITRGASLQDNMLGIVQRCIE KHGFIDESAMVERFNMKERTRRQADAVKKLVDRQVPFAEAFSRQFVSDKFGQATTHWR KLEDRIYRGVGNPCPLLLIGLPASVVAE" gene complement(1198278..1198967) /locus_tag="RTM1035_05888" CDS complement(1198278..1198967) /locus_tag="RTM1035_05888" /note="COG4725 Transcriptional activator, adenine-specific DNA methyltransferase" /codon_start=1 /transl_table=11 /product="type II DNA modification methyltransferase, putative" /protein_id="jcventer:1101493006648_RTM1035_05888" /db_xref="CDD:34341" /translation="MYNQKREKTMTAANDLQAFLGGDKFATVMADPPWRFQNRTGKIA PEHKRLARYPTMEMEEICALPVAQHLEDRAHCYLWVPNALLPEGLQVLKAWGFEYKSN IVWEKVRKDGGPDGRGVGFYFRNVTEILLFGVRGKDVRTLGPGRSQVNYIEAAEPDSD VMKTRKREHSRKPDEQYQIIESCSWGPFLELFGRGKRSGWTVWGNQAEDDYKPSWKTY AYNSASVPAAE" gene complement(1199316..1199546) /locus_tag="RTM1035_05893" CDS complement(1199316..1199546) /locus_tag="RTM1035_05893" /note="COG0732 Restriction endonuclease S subunits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05893" /translation="MIVIMTAFAKIDRLAAEAAKALKLLGHLESRIQAKAFAGDLAPH DPTDEPAETLLAHIRETRTAAPKGKRERQLQN" gene complement(1199543..1201441) /locus_tag="RTM1035_05898" CDS complement(1199543..1201441) /locus_tag="RTM1035_05898" /note="COG1479 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05898" /db_xref="CDD:31668" /translation="MGAMVINQVKTYGMQVQAYEVIDGQQRLTTFQLLLAALRDVAKE HKSKYERESTKFLLNEGVMERHAVERYKLWPTLTDRRAFIAIIDPEADVTDIPDLVDE AVDPVTLAHSAYGFFKSKIADHVLADDPETIEFKFDILYEALKDGLAIVSIELEAGDD PQTIFETLNSRGIELTPADLMRNFIFQRATGLGQQDASLNVDKLYKQHWLPLDRPFWQ QTASRGRQKTSRINWMLTDHLAMQLGQLVAVDQLFSSYRRWVLDQMPPSTSEAELTSI SATAAVEQRLFEQSKEDALGRFGRFADAFDVSTAMPLVIYIARSGSAVELEESLEILE SYILRRDICGLTTKNYNKGFVGIIDRLRRMQTSIVETLKEYLSNRKSDIDRWPDDEEF RRAWLTRDQYRNARQPRLRYILEAIEQQKRTKLNEEIEIKSDLTIEHIMPQSWRANWP VEADSEADVQEKELTRETYINKLGNLTLLTHPLNVTVSNGPFSVKLPALRAQSSLALN RELSGDKVWNEAAIKQRGHDLFCIAAMRWERPLPMAEDDAVEAGSRAFSALPEGTQCV FEYGGKRFTGNLRNGALEIIGLKGRHFSFSSASKAVTQTSRNGWRDWTIRLPGSGQEL LADDWRRE" gene complement(1201686..1202927) /locus_tag="RTM1035_05903" CDS complement(1201686..1202927) /locus_tag="RTM1035_05903" /note="COG0732 Restriction endonuclease S subunits" /codon_start=1 /transl_table=11 /product="Restriction endonuclease S subunits-like protein" /protein_id="jcventer:1101493006648_RTM1035_05903" /db_xref="CDD:41470" /translation="MTGVPQGWAQSRLADWLDISTGKLDANAATENGQYPFFTCAEQV SRIDTFAFDCEAVLLAGNGNFNLHKYTGKFNAYQRTYVLQPHEIDLGFTFVALKSLLP EITKDNRGSTIKYLRLGDIADTAAPLPPLPEQRRIVRKLDTLSARSTTARTHLTAIEK LVERYRTAVLEAAFRTAWDAGFDTTIAGCLEHAETGLVRSKAEQTAGEGYPYIRMNHY DLAGRWNDRDLTYVAATSSEFERYQLRANDLLFNTRNSAELVGKVAIWPEGKDGYLFN NNLLRMRFSADVLPGFAFWQMSSPPFRRYIEGFISATTSVAAIYQRSLMAAPFWVPDT DEQREIVRRIETAFAKIDRLKAEAAKALKLLGHLDQRILAKAFAGDLVPQDPTDEPAE TLLARIREARAATQTSRRRRR" gene complement(1202924..1204411) /locus_tag="RTM1035_05908" CDS complement(1202924..1204411) /locus_tag="RTM1035_05908" /note="COG0286 Type I restriction-modification system methyltransferase subunit" /codon_start=1 /transl_table=11 /product="N-6 DNA methylase" /protein_id="jcventer:1101493006648_RTM1035_05908" /db_xref="CDD:30634" /translation="MNPNTADIVAKLWREAKTLQGAGISIMHYVNELTYLLFLKMLEE TGQTTLIPPAYSWTELSKAEGGDQLRYYKKLLLDLGDPEIVHNPMVLAIFTDAITHLR EPKDLKTLTTNIDKIDWFTAREDGLGDMYEGLMQKVMSDTKSKAGQYFTPRALIDSII RLIQPQPGEVIQDPATGTGGFLIAADRYIKDATDDLFKLSEDQGRFQRRQAFRGHEWV PDTRRLCVMNMLLHGIESLVGCEDSCAPQGEALGRADVILTNPPFNKMPGGVNRPDFT LTAGERVGPMPFLEHAIRMLKPGGRCAIVMPDNILFGDGLGTELRRFLMVNCNLHTIL RLPTGIFYAQGVKTNVMFFTRVTDKVYPANHKVQGTQAVWFYDLRTNMPSFGKTNALT AQHFEEFERLFGSDPKGGAEREEGGESGAETGRWRKLTRDQITARGDNLDWTWLRDES GDPEDEMTEPDEIAAAIMGHLRAALEEIEGLVEELDAAPMVEAAE" gene complement(1204408..1206942) /locus_tag="RTM1035_05913" CDS complement(1204408..1206942) /locus_tag="RTM1035_05913" /note="COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases" /codon_start=1 /transl_table=11 /product="endonuclease R" /protein_id="jcventer:1101493006648_RTM1035_05913" /db_xref="CDD:33853" /translation="MKGRHIAIAEWPTQSGPADYALFVGETCVGIVEAKRYRKNISAA VDQAERYSKGFSWSGNSETWGDGFIVPFVFATNGRPYLKQVETESGIWFRDVRLPNNL RRALVGWFRPEELISMLEVEKEKSQAALQARSFDFGFDLRPYQEAAIREVEKTLATEK REMLVAMATGTGKTKLAIAMLYRLLATKRFRRICFVVDRSALGTQTTDEFMSTAIEGP KTFGQLFGIKGLEDIKPDPETRVHICTIQGLVKRVLYNAEPADVPPIGQYDLMVIDEC HRGYLLDREMSDAELSFRGQEDYVSKYRRVLEHFDAVKIGLTATPALHTAQIFGEPIY TYTYREAVVDGWLIDHEPPIRFQTALAKAGITFEAGEDVELLDSQTGEVQNATAPDEL SFQIEAFNRKVITQPFNQVIAEELAKHIDPSLEGKTLVFAATDAHADIVVNELKKAFA AQYGSIEDAAIRKITGSVDKVGTLIRSFRNDAFPQIAVTVDLLTTGIDVPKITNLVFI RRVNSRILYEQMLGRATRRCDDIGKEVFRIFDAVDLYATLQDLTQMKPVASNPKLTFE QLFDELATVTEEDQRELVRDQVLAKLHRKLRKLPSKVAQKVEDLTGETVEQLRDRLRQ GSPSDAAAHAKKYAGLGKILDWNPDGSGPNLIPISHHPDSMHAVTTGYGEYDKPEDFL DTFQSFVKNNQNQIAALTVVVQRPRDLTRAELRSLRLELDKMGFSETSLRRAWNDASN EDIAASIIGFVRQAALGDPLIPFETRVQQATKAILAKTKWTDPQKQWLRRIAEQITKE IVLDRDSIDHGNFAAHGGFNRLNKVFNGELETILHDFNEELWKVSA" gene 1206928..1207317 /locus_tag="RTM1035_05918" CDS 1206928..1207317 /locus_tag="RTM1035_05918" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05918" /translation="MATFHRPRAFAAAQINTVGFPAPISQLLVNQGAGGLFIQVDYTS RFVGGCHEGHLGGRRLSLRLFDEIAQLTICILRKGFPSFPFFLLPLMPHLSGFRCQAC FSMRLLCPLGCAQCLVALDTKAFEFLL" gene 1207543..1207722 /locus_tag="RTM1035_05923" CDS 1207543..1207722 /locus_tag="RTM1035_05923" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05923" /translation="MKAAQYIGLGFSIMHSAADESRMSTGQSLSELPQLNQAGAGVVL KIALSEPAKVGKVTI" gene complement(1208079..1208819) /locus_tag="RTM1035_05928" CDS complement(1208079..1208819) /locus_tag="RTM1035_05928" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Integrase, catalytic region" /protein_id="jcventer:1101493006648_RTM1035_05928" /db_xref="CDD:40748" /translation="MPQGRADEQRLTDDIIELADQYGRYGYRMVTGLLNNAGWCVNHK RVERIWRREGLKVPQKQKRKGRLWLNDGSCVRLRPERPNHVWSYDFVQDRTADGRVYR TLNIIDEYTREALMIRVDRKLNSTDVLDALTDLFILRGPPEYIRSDNGPEFIAQKVRD WIAAVGAKTAYIEPGSPWENGYCESFNARFRDELLNGEIFYSLKEAQILIEQWRVHYN TVRPHSALGYRPPAPESIVPLDQRPTMH" gene complement(1208927..1209205) /locus_tag="RTM1035_05933" CDS complement(1208927..1209205) /locus_tag="RTM1035_05933" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Transposase and inactivated derivative" /protein_id="jcventer:1101493006648_RTM1035_05933" /db_xref="CDD:41572" /translation="MAGKREKPEEIVSKLRQVEVLQGQGATIAEAVRQIGVTQQTFYR WRKLYGGMGRSQLARLKELEKENQRLRRAVSDLTLDKLILTEAAKGNF" gene complement(1209233..1210060) /locus_tag="RTM1035_05938" CDS complement(1209233..1210060) /locus_tag="RTM1035_05938" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="putative integrase dna protein" /protein_id="jcventer:1101493006648_RTM1035_05938" /db_xref="CDD:29502" /translation="MAKSNEFTVAKLKSLPVGKYCDGLGLWLHKRADGGAQWIFRFHL WGRQREMGLGSLKTVSLADARRKADLARKQVHEGIDPVKERRLQRQQGNARDGRLEAL AMATFEAQKPSLKGANANGAWLGPLRVHVLPKLGQMPIIKIDQDDIARALAPIWHEKT VTGKKAISRLRIVFKYARAKGFLVNREIIEEAVIILGENKKPAKPSLALPWSDVPAFY QTLSDEDPAQLALRMLILTGVRADSVINMQLSQINGSVWNIPALHWSSPLKVVHQLG" gene 1210251..1213139 /locus_tag="RTM1035_05943" CDS 1210251..1213139 /locus_tag="RTM1035_05943" /EC_number="1.4.4.2" /note="COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain" /codon_start=1 /transl_table=11 /product="glycine dehydrogenase" /protein_id="jcventer:1101493006648_RTM1035_05943" /db_xref="CDD:31207" /translation="MPPARSDEDKPMSFNATDYLPYDFANRRHIGPSPEEMTEMFKVL GVGSLEALIDETVPKSIRQEKPLDFGKPKSEQELQFHMWQTASKNKVLTSLIGQGYHG TVTPPAIQRNIFENPAWYTAYTPYQPEISQGRLEALLNFQTMVSDLTGLEIANASLLD EATAAAEAMTMAQRVAKSKAKAKAFFVDENCHPQNIAVIQTRAAPLDIEVIVGSPDDL EADKVFAAIFQYPGTYGTLRDFTPEIAALHERGALGIVIADPLALTLLKEPGAMGADI AVGSTQRFGVPVGYGGPHAAYMATKDAYKRAMPGRIVGVSIDSHGNRAYRLSLQTREQ HIRREKATSNVCTAQALLAVMASMYAVFHGPKGLRAIAQRIHRKTVRLAKGLEAAGFH VEPGDFFDTITVDVGLLQRGVLQSAVREGINLRRVGETRIGITLDERSRTATIESVWR AFGIIMEDADFTPEYRIPDVLQRESDYLTHPIFHMNRAETEMMRYMRRLADRDLALDR AMIPLGSCTMKLNSAAEMMPVSWREFSLLHPFVPADQALGYREMIDDLSAKLCDITGY AAISMQPNSGAQGEYAGLLTIAAYHRAQGQGHRRVCLIPVSAHGTNPASAQMVGWDVV VVKSAENGDIDVEDFRAKAEKHADNLAGCMITYPSTHGVFEETVREVCEITHAHGGQV YIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLVPHLPG HPETGGSQGPVSAAPFGSPSLLPISWAYCLMMGGAGLTQATRVAILNANYIAKRLEGA FPVLYKGRGGRVAHECILDVRPFAESAGVTVDDIAKRLIDCGFHAPTMSWPVAGTLMV EPTESETKAELDRFCDAMLAIREEIRDIEEGRIDAENNPLKNAPHTMEDLVKDWDRPY SREQGCFPPGAFRVDKYWPPVNRVDNVYGDRHLICTCPPLEDYAEAAE" gene complement(1213371..1215158) /locus_tag="RTM1035_05948" CDS complement(1213371..1215158) /locus_tag="RTM1035_05948" /note="COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LuxR family/hydrolase, alpha/beta fold family protein" /protein_id="jcventer:1101493006648_RTM1035_05948" /db_xref="CDD:32379" /translation="MTSNRHTADKVDVVTLSDADRAATLDRLYDVALDPVRYEALLDH WESAIGPLRAQVDLDAPRLLDEPQISEHFRRATAFLDRLAPEDADHDGLDAMLAPFDR VPALLLDRCRHIRAANPAAHQAMALPENARLFDLPIHEADMDALAGALDILFDSREKD TAVLRVRSVQAGHLIVFRLQRCVAPDGAVLVLAASNEISMPPGFCEILIEAFDLTQTE ADILCHLVDCRGVNEIAAERGRSVDTIRAQIKSLLAKTETHSQLELVRLALSMIDMTA MTVRAAPGPRVVSRGYAALSERDFKSLVMPDGRRVDYLILGAPRGRPVLYLPLDFGLV RWPASAEACATLRGLKIIVPLRPGYGLSDMVAQGADYDAALYDDTMRVLRAEKVTRCP ILCLSGDAYYAVKLARLNPLAFSGIVACSGMLPLTRREQFERMHKWHRFIMAGAKYTP HLLPFMVKAGFLLARKIGKRNFLHAVYGNSIADVATIEDPEAFEALATGSEVALSDNH SAHAAFSRQLVSGQLDDWSADVEALRGELPLVFMNGAQDPQVPLATFEEFRRDYPWIE FHLLEDAGQLAFFRHWRPVLDRLTLLLAD" gene complement(1215251..1216117) /locus_tag="RTM1035_05953" CDS complement(1215251..1216117) /locus_tag="RTM1035_05953" /note="COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family" /codon_start=1 /transl_table=11 /product="inositol monophosphatase" /protein_id="jcventer:1101493006648_RTM1035_05953" /db_xref="CDD:30831" /translation="MTDSLPIPLSAPLTPAQQTMLVNLVRRAARAEIMPRFRTVTRAD ASTKSGPHDLVTEADHQAEAMLARGLQRMFPHALIVGEEAVAAKPTLREDVSEAELAF IIDPVDGTWNFVHGLPLFGVIIAVTRFGRPVLGLLYDPVSDDWVIADEAAPARMATVQ GAERLVRVSGGGALAELQGYMHFSLMPKDRQEKLAPLLPALGRCNALRCSCHEYRLLA QGAVDFVMSEVLNPWDHAAGVLICQKAGGVARMLDGRDYNTSITQGTLLSAANEATWL SLKDHFACLLES" gene complement(1216255..1218777) /locus_tag="RTM1035_05958" CDS complement(1216255..1218777) /locus_tag="RTM1035_05958" /note="COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein" /protein_id="jcventer:1101493006648_RTM1035_05958" /db_xref="CDD:32941" /translation="MSLRIAARLARRELRGGLRGFRIFLACVILGVAAIAAVGTLRES IRAGMSEQGAAILGGDAELELTYRFASEDEYAWMARNADAVSEIADFRSMAIAPDGRR ELTQLKAVDHAYPLVGTVVLSPDMPLDVAFGGAGGVPGAVMQPILAARLGITVGDTFR LGEREFRLMAELVKEPDQTRAGFGLGPRTIVSRANLDGSGLLSAGSLFTTKYRLDLPE GTDLAAFEARALQELDGSGFRWSDARNASPRVAEFVTRLGAFLVLVGLSGLAVGGVGI SAALRAYLAGKVQVIATLRTLGADQRTIFLTYFIQVGVLALLGIIGGLILGVGLPVLL GPVIAARLPVPAIFAPYAAPMAEAALYSVLSVLIFTLWPLARARNIRAAALYREAAGA TRRWPGWPWIATTLGLIALLLLAAILFSGNTPLTLWTAGGIGAALLVLTLAAMLVQRL ARSLRPRLRGRPALGWALGAIGGPGTTAGPVMLSLGLGLAVLAAVGQIDGNLRRAIAA DLPERAPSFFFVDLQKDQMDWFLDRLETDQAVSRIDNAPMLRGIISRINGRPATEVAP GHWVVEGDRAVSYADALPARTTITAGTWWGEGYSGAPQLSFAAEEAMEMGIGIGDEIT VNILGRDITAPITSLREVDFSSVGMGFVLLMNPAAVAGAPHTFIATVYADDQETEENI LRDVTDRFPNVTAINVRDALSQVTDLLAGLASATSWGASITLLTGFLVLIGAAAADQR ARTYEAAILKTLGATRGRILTSLVLRALILGGAAGGVALGAGIGGGWAVSHFVMDTSF TVIWPSAIGIIFGGMLVTLLAGLVFALGPLRARPARTLRARE" gene complement(1218774..1219451) /locus_tag="RTM1035_05963" CDS complement(1218774..1219451) /locus_tag="RTM1035_05963" /note="COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component" /codon_start=1 /transl_table=11 /product="ABC efflux transporter, ATPase subunit" /protein_id="jcventer:1101493006648_RTM1035_05963" /db_xref="CDD:48288" /translation="MSSPILSLTDVTLSLEGNAGLVRILHGISLDVHKGETLGLIGPS GSGKSSLLMLMGGLERATSGRITALGQDLSAMNEDQLARLRRENFGVVFQSFHLIPTM TALENVATPLELSGVADAHGRAQEELSTVGLAARAGHYPSQLSGGEQQRVALARAAAP RPAIILADEPTGNLDSTTGASIIDLLFGLRDRHGATLVLVTHDPELAARCDRVISLRD GRVEAAA" gene 1219450..1220136 /locus_tag="RTM1035_05968" CDS 1219450..1220136 /locus_tag="RTM1035_05968" /note="COG2755 Lysophospholipase L1 and related esterases" /codon_start=1 /transl_table=11 /product="Lipolytic enzyme, G-D-S-L family protein" /protein_id="jcventer:1101493006648_RTM1035_05968" /db_xref="CDD:29283" /translation="MRLRLIYKGFLTYGAARPLGKVVAAFLCLVSPVMAAEPVTVLAL GDSLTQGYGLPEQDGLVPQMRKWLEDQGVEAELINAGVSGDTTAGGAARVEWSLTPEV DAMIVTLGGNDLLRGIDPAVSRRNLESILKIAQANEVEVLLVGLSAPGNYGAEYKSSF DAIYPELSEAYGAFYAPDFFAGLGGGDPAALQQWFQADGIHPNAEGVARIVEGLGPHL RALIEAAQAE" gene complement(1220148..1221053) /locus_tag="RTM1035_05973" CDS complement(1220148..1221053) /locus_tag="RTM1035_05973" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006648_RTM1035_05973" /db_xref="CDD:30928" /translation="MIRTEALRAFVTVTEHGNIRDAAEILCRTQSAVSMTLKQLEAEL GGPLFESDRKSKLTDLGTFVLDVVGPLLRDHDRALELITGYARGYSGRLRIAAVPSVA ALILPAILKSFVEARPEAEIDLYDTDSASVREMLLRGDTDLGLASPAAEPDGLRAIPL FTDALVFVCNAAHPLAAETRPLAWHQLSGERLILNETLSALSTPEFKTLAARARLSVR NLTSLLAMVQADAGDTILPGLATRALPDGVVTRPLADAACLRRVSLLVRDGRTPSPVA AAFIDMLCDALPDMAQRFGLREPWS" gene 1221052..1222647 /locus_tag="RTM1035_05978" CDS 1221052..1222647 /locus_tag="RTM1035_05978" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase family protein" /protein_id="jcventer:1101493006648_RTM1035_05978" /db_xref="CDD:40271" /translation="MAGLLDVSGKLKLDAVIFVCLNSVNRGSSAEAGEAPQSDGSTER DERMTVPQTGNFIAGDWRGSDTRIENRNPSDVSDLIGTYAQADRADLDEAIAAARAAQ PAWWAAGIQKRHDVLMAIGTELMARSPEIGGMVAREEGKPRTEGAGEVYRAGQFFCYY AAEVLRQMGDFAQSVRPEIDIDVRREPVGVVAIVSPWNFPVATPAWKIAPALAFGNAV VWKPANLTPASAVALAEIIARQDMPRGLFNLVMGPGRAVGEALVSHPGIDAISFTGSV NVGRGIAAAAVPNMTKLQMEMGSKNPMLILDDADLDMAVAHAAGAAFGGTGQKCTAAS RLIVHAAVHDEFVARLADAARALQVGHALDAGTQIGPVVSADQLAQNLAYIEKGKAEG AELLCGGERLERATDGYYMAPAVFAGTRNDMAINREEMFAPITCVIKAASYDEALSIA NDSEFGLTAGIMTRSLARANHFRANMRAGTVMVNLPTAGTDYHVPFGGRGASSFGSRE QGQYAAEFYTTVKTAYVARGLPE" gene 1222644..1223633 /locus_tag="RTM1035_05983" CDS 1222644..1223633 /locus_tag="RTM1035_05983" /note="COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog" /codon_start=1 /transl_table=11 /product="peptidase M19, renal dipeptidase" /protein_id="jcventer:1101493006648_RTM1035_05983" /db_xref="CDD:32502" /translation="MSVVIDGLQYANWSEKIFRQMRAGGVDAVHVTITYHESFRETVL NIEAWNRQFERFPDLIFQGFGAEDVTRAKETGRTAIFFGAQNPSCIEDDIGLVEVLHR LGLRFMQLTYNNQSLLATGCYESEDTGLTRMGREVVAEMNRVGLVVDMSHSSERSTLE AIAHSTRPIAITHANPATWHAARRNKSDRVLGALAESGGMLGFSLYPHHLQGGGGCTV SSFCEMVARTAERMGVERLGIGSDLCQDQPDSVVDWMRSGRWTKAVDYGEGSADAPGF PPMPEWFQDNRHFGAISDGLRAVGMSTAEVEAIMGGNWLRFFRESFGPNEAAL" gene 1223630..1225309 /locus_tag="RTM1035_05988" CDS 1223630..1225309 /locus_tag="RTM1035_05988" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05988" /translation="MTCGALNPMPEAAQYRRSPDVVMRLARMGAAHPTRLSFLRQMLR RVQQEGWQFDRPVWEFDARGQGRAVYRAIGPERTYSLVAFGHDLPDEMRSDRVIATAW DATFTLFDGTPDAEDLERLALNVPVQEAGRVSPRELSLSRANKSVRLFDHVVARLAAG QQPDAAELTETGYLMRTTAVYGSGKFGAADRARIAGRPEMRAPFQAEMLSVWLTRAYT VDLVEHLARVRGGALAVPLAPELRRMLGVGNSTGLGMAPFLVRHPVLLNNWMMAREEA LARVRAKATATPETLAGFEVALKAAQVNAQGWQSGHPVQQARLLELRDGLAAVCAHLC AGWDPHGDHPWDALWRWAEGLLPLEAQEALAAAMIEPHGDLVDGLADCMAADEDSAFG IDGAMTVARARAILSERYGWAMALDHDTPEGCARFWYVSEEKLEPRLGERAAEPGAER ELPLDISRQAAALARALLEWPEDAPIAKVLLAAPEHRLMLRRVQMAATRPLAEVRDNL IAADVLPIDLLRCKLAFFGATRFDPRSDRWVRISLFQGAPYPQDMAMGASL" gene 1225306..1225962 /locus_tag="RTM1035_05993" CDS 1225306..1225962 /locus_tag="RTM1035_05993" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_05993" /translation="MTECAQDPTRAGSEPPDWAREVMQLSLSEITALATKAARGAGLS WGEAEEAGWACGWLARAGLPGTAMLLRVLERRDATCPLLKGIVLMDHAGLPEGPFALP VTLQDVVEPLLLVPFLARVAERLGAPVELDLGSQAICLTGSEPVPDLSAMRGAGDRSG AEVTISLAKSSAAAAPGQFDGRIDRDVWTTLDGLALLTTVPASDVSRQRAGAQSSDND " gene complement(1225978..1227090) /locus_tag="RTM1035_05998" CDS complement(1225978..1227090) /locus_tag="RTM1035_05998" /EC_number="2.6.1.9" /note="COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase" /codon_start=1 /transl_table=11 /product="histidinol-phosphate aminotransferase" /protein_id="jcventer:1101493006648_RTM1035_05998" /db_xref="CDD:30428" /translation="MTYPRYTPLIESLPASVPFVGPEEQERQRGAPFAARLGANENLF GPSPHALTAIRAEAENVWKYGDPTSHDLRAALADHMGVALENVLVGEGIDGLLGNLVR LLIGPGDAVVTSDGAYPTFNYHVTGFGEALHKVPYRDDHEDLPALIARAHEVGAKLIY FANPDNPMGTWVPGADVTAALDTLPDGCILCLDEAYVEFAPEGTAADIAPDDPRVIRM RTFSKAYGMAGARIGYAVGAAALIKSFDKIRNHFGMNRMAQVGALAALHDTGWLAHVQ AEVRRSRDSIAQVAKENGLSALPSATNFVTVDCGRDGAYARRVLAGLVARGVFVRMPF VAPQDRCIRISCGRAEEMEVLAKTLPEALRDADQTG" gene 1227193..1227987 /locus_tag="RTM1035_06003" CDS 1227193..1227987 /locus_tag="RTM1035_06003" /EC_number="4.2.1.17" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="jcventer:1101493006648_RTM1035_06003" /db_xref="CDD:31227" /translation="MAMARVTTEIRDHIAHVTLTRADKRNALDPAMTEAIVAAGQALI EADIRAVVLSGEGKAFCAGLDVMSFAQLAAGDPEGLILPRSHGTGNLFQAVAMVWRQV PVPVIAALHGVVYGAGFQLALGADIRIAAPDTELAIMEMKWGLIPDMGGMALLPHLTG SDVIRRMTYTARPISATQALARGLVTELADDPLAAAHDLATEIAGRSPSAIRAAKRLI GVAESGADEAAILMAESREQAALIGKPDQMEQISANLAARAPVFRG" gene complement(1227991..1228500) /locus_tag="RTM1035_06008" CDS complement(1227991..1228500) /locus_tag="RTM1035_06008" /note="COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism" /codon_start=1 /transl_table=11 /product="putative phnA protein" /protein_id="jcventer:1101493006648_RTM1035_06008" /db_xref="CDD:32652" /translation="MPCALCAADTPLRPYAVSGGPEAASVDLCALCADQIDGTLEPEH WRCLASSMWSEDTPVQVLAARILARLSDHDWARDLVDQLWLDEDTRAWVDNLPQDSGH RDSNGVPLAQGDTVVLIKDLLVKGANFTAKRGTAVRGISLVLDNPAHIEGRVEGQRIV ILTEFVKKR" gene 1228665..1230464 /locus_tag="RTM1035_06013" CDS 1228665..1230464 /locus_tag="RTM1035_06013" /note="COG0481 Membrane GTPase LepA" /codon_start=1 /transl_table=11 /product="GTP-binding protein LepA" /protein_id="jcventer:1101493006648_RTM1035_06013" /db_xref="CDD:30829" /translation="MTDLAHIRNFSIVAHIDHGKSTLADRLIQSTGTVQDRDMKAQML DAMDIERERGITIKANTVRIDYKAQNGELYVLNLIDTPGHVDFAYEVSRSMRAVEGSL LVVDSTQGVEAQTLANVYQAIDAGHEIVPILNKIDLPASECDRVAEQIEDVIGIDASG AIRVSAKTGVGIAETLEAIVKHLPAPKGDENAPLKAMLVDSWYDAYLGVVVLVRIMDG RMKRGDRIHMIQTEATYNVERIGVFRPQMEKVESLGPGEIGFITASIKQVRDTKVGDT ITHEKRPCDKALPGFKPSVPVVFCGLFPVDSNEFEDLRDAIEKLALNDASFSYEMETS AALGFGFRCGFLGLLHLEVIRDRIEREYNIELITTAPSVIYHLYMKDGSRRDLHNPAD MPDLTYVGHIEEPRIKATILVPDEYLGDVLKLCQDRRGIQMDLTYAGARAMVVYDLPL NEVVFDFYDRLKSVTKGYASFDYHLEGYREDSLVKMQVLVNDEPVDALSMMVHRDRAE MRGRAMCEKLKDLIPRHMFKIPIQAAIGGKVIARETLSALRKDVTAKCYGGDATRKKK LLEKQKAGKKKMRQFGKVDIPQEAFISALKMDS" gene 1230557..1231084 /locus_tag="RTM1035_06018" CDS 1230557..1231084 /locus_tag="RTM1035_06018" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06018" /translation="MTTKAKTKSPRKTTTRTTTKTGAPKPRTTRKVAPPQEVAPEAEI AVVAETVSAETDTGNVITLAVAEAIPADSGPELKKQELIDKVLAKGDIKKKNAKPVVE AVLEVLGEVLAEGREINLPPLGKIKINRVRDMANARIIIAKIRQAKPGAGPDTEADDD DSDEDMKEGVAQGEE" gene 1231104..1231175 /locus_tag="RTM1035_t07492" tRNA 1231104..1231175 /locus_tag="RTM1035_t07492" /product="tRNA-Val" gene complement(1231230..1231976) /locus_tag="RTM1035_06023" CDS complement(1231230..1231976) /locus_tag="RTM1035_06023" /note="COG0354 Predicted aminomethyltransferase related to GcvT" /codon_start=1 /transl_table=11 /product="glycine cleavage T protein (aminomethyl transferase)" /protein_id="jcventer:1101493006648_RTM1035_06023" /db_xref="CDD:30703" /translation="MTRRILEITGKDALQFLQGLVTNDLQKLDHGLVYAAILTPQGKY LADFLLSRHDDAIRLDVDASLAPMLLQRLTMYKLRADVTIKETDLKVRRGTGPAPLGA LVDPRHADLGWRLYGETGGDDGSDFDRIRVAHCIPETGIELTPDTFILEAGFERLNGV DFRKGCYVGQEVTARMKHKTELRKGLTLVAVHGAAPIGSEIFTPEGKAAGTLYTQSGG RGIAYLRLDRAAAGMTSGEARVDPLSIPTQ" gene 1232041..1232724 /locus_tag="RTM1035_06028" CDS 1232041..1232724 /locus_tag="RTM1035_06028" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="glycosyl transferase, group 2 family protein" /protein_id="jcventer:1101493006648_RTM1035_06028" /db_xref="CDD:40622" /translation="MRAALSVVIPTLNAASVLPACLAALMEGLEAGLIRELIISDGGS DDATLQIAEATGAVVVKGAASRGGQLRRGAHLAGGGWLLFLHADTVLPAGWANTVSAQ FEQGGPAAFRLSFDATGLMPQLVSGWANLRSRVLGLPYGDQALLIPRATYDVAGGYAD IPLMEDVAMARALRGRISVMPLAVTTSSARYRREGWVRRGARNLWTLIRYLCGTDPVQ LAKAYRRKR" gene 1232892..1234094 /locus_tag="RTM1035_06033" CDS 1232892..1234094 /locus_tag="RTM1035_06033" /note="COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase" /codon_start=1 /transl_table=11 /product="aminotransferase, class V" /protein_id="jcventer:1101493006648_RTM1035_06033" /db_xref="CDD:30424" /translation="MSLAHGRAYLAIPGPSVMPEEVLRAMHRAAPNIYEGDLIEMTAG LIPDLRAVARTRQHATIYIANGHGAWEAALANTLHPGDRVLVPATGRFGHGWAEVAQG QGIIVDMLDFGKRSPIDLNRLEEVLRTDARHEIKAVLATHVDTSTSVLNDIAGVRAAL DAAGHPALLMADCIASLACDRFEMDAWGVDVMVAGSQKGLMVPPGLAFVFFSDKAAEA RKRLPLVSRYWDWTHRADPQMFYQYFGGTAPTHHLYGLRAALDLIAAEGGIEAVWARH ETLARAIWAACETWGQSGPLELNISDPALRSRAVTALRIGAPHGSRLRSWVQDYAGVT LGIGLGMAEPGDPAWHGFFRIGHMGHVNAHMVLGALGSIEAGLTALDIPHGAGGLEAA ARVISGKS" gene complement(1234139..1235488) /locus_tag="RTM1035_06038" CDS complement(1234139..1235488) /locus_tag="RTM1035_06038" /EC_number="6.4.1.2" /note="COG0439 Biotin carboxylase" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase" /protein_id="jcventer:1101493006648_RTM1035_06038" /db_xref="CDD:34383" /translation="MFEKILIANRGEIALRVIRAAREMGIKTVAVHSTADADAMHVRM ADESVCIGPPSSSESYLSIPSIIAACEVTGAQAIHPGYGFLSENANFVQIVEDHGLTF IGPSAEHIRIMGDKITAKDTMKALGVPCVPGSEGGVANLKQAQALCAEIGFPVIVKAT AGGGGRGMKVAQSAAELEKAFLTARSEAKAAFGNDEVYIEKYLTTPRHIEIQVFGDGK GGAVHLGERDCSLQRRHQKVLEEAPGPCITAEERARIGKICADACANIQYRGAGTIEF LYEKGEFFFIEMNTRLQVEHPVTEAIFGVDLVQEQIRVAEGMPMSFTQDDLIINGHAI EVRINAEKLPDFAPRPGRITQFHAPGGLGVRMDSALYDGYKIPPYYDSLIAKLIVHGK DRHSALRRLARALGELIVDGVDTTIPLFHALLQEDDIQSGNYNIHWLEHWLETNLRD" gene complement(1235500..1236000) /locus_tag="RTM1035_06043" CDS complement(1235500..1236000) /locus_tag="RTM1035_06043" /note="COG0511 Biotin carboxyl carrier protein" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase, biotin carboxyl carrier protein" /protein_id="jcventer:1101493006648_RTM1035_06043" /db_xref="CDD:30857" /translation="MVEEDMSNKSHESDVAFIKALAELLNDNDLTELSVKREYGEDDT LQVRVSRRGETVTTHYAPPPAPAYAPPPAAAPAAAAPAAEDPASHPGAVTSPMVGTVY MQAEPGAPAFVSVGTQVSEGDTLLIIEAMKTMNHIPATRGGTVKRILIEDGAAVEYGA PLMIIE" gene complement(1236135..1236677) /locus_tag="RTM1035_06048" CDS complement(1236135..1236677) /locus_tag="RTM1035_06048" /note="COG2202 FOG: PAS/PAC domain" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LuxR family protein" /protein_id="jcventer:1101493006648_RTM1035_06048" /db_xref="CDD:34204" /translation="MDIKELAFDHAPVGLALLEHRIIRQCNQKFAAIFGDTPADYTNI PLARYYPSIEDYRRIGADALAIMRKTGRYADERVMKRRNGTLFWCRVRGQSLTPEAPF QRGIWSFSDLSDERPLVELTQREREVAILTCRGMTSKEIGLDLGLSYRTVEVYRARLL EKFQARKLAELVAKLSGMPL" gene 1236785..1238263 /locus_tag="RTM1035_06053" CDS 1236785..1238263 /locus_tag="RTM1035_06053" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="AMP-binding enzyme" /protein_id="jcventer:1101493006648_RTM1035_06053" /db_xref="CDD:30666" /translation="MNIGIWLERAAQAWPRRAALFTGVDLVADYAGFDRAAREVAGGL MAQGVAAGDRVAIFMGNAPEYLLALYGIWYAGAAAVPINAKLHGAEAAWIIADAGAQV VLADAVRREALAEQGVVAQAVTRGAAVAEVAARAPGDLAWLFYTSGTTGRPKGVRITH RMLVAMSLSYLADVDEVTGDDATLYAAPMSHGAGLYAMVHVLRGARHVCPASGGFDEV EIFDLARHHGRVHMFAAPTMVKRLSAQARLRGETGEGLRSVVYAGGPMYLADILEAVE VFGPIFLQIYGQGECPMAITALSRADVADRSHPRWRERLASVGRAQSVVEVRIADETG AEVPPGEVGEILVRGDAVMPGYWQNVEASEKALRGGWLWTGDLGRMDGDGYVTLQDRS KDMIISGGSNIYPREVEEVLLTHPDVIEAAVVGMADPEWGEVVVAFVVCDGTLDEAAL DAHCLRQIARFKRPKRYIAVAELPKNNYGKVLKTELRARLTT" gene 1238351..1239049 /locus_tag="RTM1035_06058" CDS 1238351..1239049 /locus_tag="RTM1035_06058" /note="COG0603 Predicted PP-loop superfamily ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06058" /db_xref="CDD:30948" /translation="MRTIVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHVKEVEY AAACARRLGVPHKVVDIRQIGAALSGSALTDDVAVPDGHYAEETMKITIVPNRNAIML AIAFGMAAAEKADAVATAVHGGDHFIYPDCRPGFINAFQAMQDAALEGYAEVKLYTPY LQGSKGDIVTDGAKHGTPFAETWSCYKGGAKHCGRCGTCVERREAFHLAGVVDPTEYE DRDFWLAAVAGRGA" gene 1239049..1239405 /locus_tag="RTM1035_06063" CDS 1239049..1239405 /locus_tag="RTM1035_06063" /note="COG0720 6-pyruvoyl-tetrahydropterin synthase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06063" /db_xref="CDD:31064" /translation="MYRITKEFHFSASHQLFGLPETHQCARLHGHNYIVVVELTAAEL NAHGFVRDYLDLGDLKRYIDDTLDHRHLNDVLGDDCVTAERMAKHLFDWCRARWHEVT AVKVSETPKTWAEYRP" gene 1239402..1240124 /locus_tag="RTM1035_06068" CDS 1239402..1240124 /locus_tag="RTM1035_06068" /note="COG0602 Organic radical activating enzymes" /codon_start=1 /transl_table=11 /product="radical activating protein" /protein_id="jcventer:1101493006648_RTM1035_06068" /db_xref="CDD:30947" /translation="MTEAIRVSEIFGPTIQGEGALIGQPTVFVRTGGCDYRCVWCDSL HAVESAYRETWVPMSPEVVLAEVARLSGGRPIMVTLSGGNPAIQPLGALIDLGHARGY RFAMETQGSVARDWFAALDMLVLSPKPPSSGMEVDWALFDDCVAAAKGAASVLKIVVF DEADYEWARAVAGRYPQLPLYLQPGNHTPPPPEDDAATVDQAGIDARMRWLVERVTGD GWFDAKVLPQLHVMLWGNKRGV" gene 1240136..1240600 /locus_tag="RTM1035_06073" CDS 1240136..1240600 /locus_tag="RTM1035_06073" /note="COG0780 Enzyme related to GTP cyclohydrolase I" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase I" /protein_id="jcventer:1101493006648_RTM1035_06073" /db_xref="CDD:31123" /translation="MSENIYKDLKQLGGAAQIPQTPEEALLERVANPQADVQYNVRFT APEFTSLCPMTGQPDFAHLVIDYVPGKWLVESKSLKLYLTSFRNHGAFHEDCTISIAR RLVGFLEPEWLRIGGYWYPRGGIPIDVFWQTGPMPEGVWIPDQGVPPYRGRG" gene complement(1240652..1241341) /locus_tag="RTM1035_06078" CDS complement(1240652..1241341) /locus_tag="RTM1035_06078" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006648_RTM1035_06078" /db_xref="CDD:48257" /translation="MLELNAVNSGYGETQVLYGMGLRAEAGRVLAILGRNGAGKSTTL KTVMGLLPLRDGQITFEGRAMPKRPYDIAKAGIAYVPETRDIFPSLTVRENLEIASKR FDGAWTMDRVLDLFPRLGERLENGGTQLSGGEQQMLAIARALLMNPRLLILDEPTEGL APIIVKLIHDKLMELKREGLSMVLVEQNFGFATSLADDVVVVSKGQVVWTGTADDIRA DTEAQHRWLGV" gene complement(1241334..1242077) /locus_tag="RTM1035_06083" CDS complement(1241334..1242077) /locus_tag="RTM1035_06083" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="ATP/GTP-binding site motif A (P-loop):Ras GTPase superfamily:ABC transporter:AAA ATPase" /protein_id="jcventer:1101493006648_RTM1035_06083" /db_xref="CDD:48252" /translation="MLETRNLDKSFGAVHVTRGVSLKLERGERRVILGPNGAGKTTLF NLLVGELSPDSGSVHLAGENVTALPVARRARQGLSRSYQKNTLFDGLTVEENLGLAAA IHTGNATRLYTDSLARPEVRDIVAEVAEQVNLMPYLHARVSEVSYGVRRQLEVGVALA TRPLVLLMDEPTSGVGPEMAKGFHDLLNNLPRDLTLLIIEHDMDLAFDVADTITVLNY GEVVFDGLPEAARGSKLLKEIYLGSWEDA" gene complement(1242070..1243074) /locus_tag="RTM1035_06088" CDS complement(1242070..1243074) /locus_tag="RTM1035_06088" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="probable branched-chain amino acid transport system, permease component" /protein_id="jcventer:1101493006648_RTM1035_06088" /db_xref="CDD:33917" /translation="MFRHTPLRYGALVLLASAALFQAFTAEYFGLEILTEILILAMLV IALDMVAGFGGMVSLCHGALLGVGAYGYAILSTKVGLTPVAAMGGAVAITGAIAWVIG AICARSHGIYFIMATLAFGQMGYSYVFEAPLFGGDDGLGGIERLDLALIGLDLNDGRS FALFCLAMLAAIYGAAVLILRSGLGRSLSGVMHNEQRMRALGLTVWRVKADVFGLSGL ISGLAGVMAAQHVMFVSPGLLSWTVSGEALVVVILGGLGTLVGPLLGAAVFVLLKHEV GALTSYWHLVVGVILIAVVMSRANGIFGWIEARFGARIERRAADAVRDIDPREVKTDA " gene complement(1243079..1243948) /locus_tag="RTM1035_06093" CDS complement(1243079..1243948) /locus_tag="RTM1035_06093" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="jcventer:1101493006648_RTM1035_06093" /db_xref="CDD:30905" /translation="MSLDLGFWTLQALNALQLSMLLFLLSIGLTVIFGLMHFVNLAHG ALYALGAYFAASVAAVGGYWAGFFLAPVAVAGVGVLLYSGLIQRMRKSGPMAQVLVTF GLIFALLDITRIVWGDLALGLEVPELLAGRVALLGVEYPAYRLFIIALGLAIFGALAF VLSRTQIGAMIRAGVDNDAMAACLGINVERLFFIVFCVGCALAGLAGAVAAPLLSVTP DMGLQILIPTLIVIVIGGLGSLKGAIAGSLIFGFVQTFGAVLAPQLASVLIYALLAAV LVIRPVGLFPAKG" gene complement(1244003..1245178) /locus_tag="RTM1035_06098" CDS complement(1244003..1245178) /locus_tag="RTM1035_06098" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="Twin-arginine translocation pathway signal" /protein_id="jcventer:1101493006648_RTM1035_06098" /db_xref="CDD:31027" /translation="MKRAFLAALGLATGFAMPATAQDIKVGLLLPFSGVYAALGNDIE VGFTTALEQFGSETAATFEIVREDTEVKPPVALAKAKKLILQDKVDVISGIVSSGVLG AVRDMVHGAGVPLIVANAGNDEATGEACSPYITRMSFSNGQVNRPMGQWMYDQGIRKV YTLAPDYAAGRQMIDGFVQTFTAAGGEIVGQDFTPFQKTQDFGPYMAQAKSSGAEAVF VFYAGGEAISFVKQYDSFGLKAELPLYGSGFLTSSLYVNAQGPAAEGVITALHYVPTI DSPANAQFVEAFTAKTGRVPSEFAVHGYDAGRALIEAVKAGATDRESLANALRQVRFD GPRGALSIDPATNNIVQPIYVYETIAGTDGLTQKVLAELPAEADPVNGCEMAAPVSN" gene complement(1245221..1246000) /gene="fabG" /locus_tag="RTM1035_06103" CDS complement(1245221..1246000) /gene="fabG" /locus_tag="RTM1035_06103" /EC_number="1.1.1.100" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-ketoacyl-(acyl-carrier-protein) reductase" /protein_id="jcventer:1101493006648_RTM1035_06103" /db_xref="CDD:40206" /translation="MTPRFADKVMVVTGAAQGIGRRVAERAAAEGAKVLVVDRSEHRD AVVTAIRDAGGEAQALNVDLETWEGCDAAMAAAIDIWGRIDILINNVGGTIWAKPYEH YAPHEIDAEVRRSLFPTLYCCRAAIERMLPQGSGVIVNVSSIATRGLNRVPYAAAKGG VNAITASLAWEVGERGIRVVATAPGGTEAPPRVVPRNPNAAEEQREDWYQTIVDQTIQ SSLMKRYGTLDEQAGPILFLASDEASYITGVTVPVGGGDLG" gene complement(1245997..1247019) /locus_tag="RTM1035_06108" CDS complement(1245997..1247019) /locus_tag="RTM1035_06108" /note="COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases" /codon_start=1 /transl_table=11 /product="oxidoreductase FAD/NAD(P)-binding protein" /protein_id="jcventer:1101493006648_RTM1035_06108" /db_xref="CDD:30889" /translation="MTSYNIALNFEDGVTRVIQCEDDEKVTEAAFRQKINIPMDCRDG VCGTCKCFAEKGKYELEFYLDEAMTEDEAAEGYVLTCQMMPQSDCVIRVPASSAMCKT APEAISAEVLGVDRLSETSFGLRVKLAKPMGFLPGQYVNISVPGTEAHRSYSFSSAPG AHEATFLIRNIPGGLMSRYLGERATAGDAVTLTGPMGAFYLRPIERPQLWLAGGTGLA PFLSMLEQVATHGADQPITLYYAVTRAADLVELDRVMALAEAIGNVTVITVLADQNEE HARKGFVTDHVTAEDLNGGDCDVYLCGPPPMVDAVRAHFAQLGVTPAAFHFEKFNPTE TEAAAA" gene complement(1247076..1247609) /locus_tag="RTM1035_06113" CDS complement(1247076..1247609) /locus_tag="RTM1035_06113" /note="COG5517 Small subunit of phenylpropionate dioxygenase" /codon_start=1 /transl_table=11 /product="BENZOATE DIOXYGENASE SMALL SUBUNIT" /protein_id="jcventer:1101493006648_RTM1035_06113" /db_xref="CDD:35076" /translation="MTMTTATLDRQSTEATMTYEEIQAFLYAEARALDDRDWDNWLTF YHADCPFWMPAWDDEDLLTEDPQNEMSLIYYPDRSGIEDRVFRIQTDRSSATSLPEPR TNHNLANIEVLSREAGTITLRFNWHTLTYRYGKTDQHWGTSYYTIDVTGKNPLITDKK VVLKNDQIHHVIDVYHI" gene complement(1247616..1249004) /locus_tag="RTM1035_06118" CDS complement(1247616..1249004) /locus_tag="RTM1035_06118" /note="COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit" /codon_start=1 /transl_table=11 /product="ring hydroxylating dioxygenase, alpha subunit:Rieske (2Fe-2S) region" /protein_id="jcventer:1101493006648_RTM1035_06118" /db_xref="CDD:29786" /translation="MFTQSNLDELEGRLDGIVQEDAEAGIFRARRDMFTDEELFELEI KHIFEGNWIYMAHESQIPNPGDYFTLHMGRTPVVITRDKDGNLNALVNACSHRGAQLC RFKRRNQKTFTCPFHGWTFSNTGKLLKVKDPNGAGYPEQFNKDGSHDLTKVARFENYR GFLFGSLNADVAPLEEYLGEARKMIDMVVDQSDEGLEVLRGSSTYTFDGNWKLQAENG ADGYHVSAVHWNYVATTSHRTADGKEDKIKATDASKWAKQKGGFHSYVNGHLLLWTTW ADSTNRPNYPRLAEWTEKYGATKAEWMVGVLRNLCLYPNVFLMDQFSSQIRVFRPISV DKTEVTIYCIAPKGESQDSRSRRIRQYEDFFNASGMATPDDTEEFRATQRGYAGAAHA KWNDICRGATQWIHGPDEDAKALGVNPILSGARTEDEGLFVIQHKQWSERMAQAIAKE RETAPGSAVAAE" gene complement(1249045..1250205) /locus_tag="RTM1035_06123" CDS complement(1249045..1250205) /locus_tag="RTM1035_06123" /note="COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily" /codon_start=1 /transl_table=11 /product="Mandelate racemase/muconate lactonizing enzyme" /protein_id="jcventer:1101493006648_RTM1035_06123" /db_xref="CDD:48193" /translation="MVNAVTKIDQIETMILDIPTIRGHVLSMATMRVQTAVLVRMRFS DGSEGIGEGTTIGGLTYGPESPESIQSAIDTYITPALLGRSADDVNGALQLVDHLVKG NRIAKAAVEIALWDGLGKRLGVSVAQLFGGAVHGRLPVAWTLASGNSETDIAEAQEMI AARRHNIFKLKIGKRAVAEDVAHVARIKAAVGDAASIRVDVNQAWSLQDARWGLRGLQ DVGCELVEQPVRARYLNALRELTRAHEIAVMADEALNGPEDAVSIVARGAADVFAVKV AQSGGIKRASEVVAIGQAAGLGLYAGTMLETGLGTAAALQLFAGIEDLRWGSELFGPL LLTEDILATPIVYRDFTVEVPQGAGLGVSLDPDKIDFFRRDRARSLKTVAGE" gene complement(1250392..1250652) /locus_tag="RTM1035_06128" CDS complement(1250392..1250652) /locus_tag="RTM1035_06128" /note="COG3750 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06128" /translation="MDDMNSDSNYRVTADELRQFIERFERLEAEKKDIADQQKEVMAE AKGRGYDTKVMRKVIALRKRDKDDIAEEEAVLEMYKEALGMM" gene 1250787..1251002 /locus_tag="RTM1035_06133" CDS 1250787..1251002 /locus_tag="RTM1035_06133" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06133" /translation="MEYMIWSGAALSLAGLATLMWCIVKVWRARKAGLSDDDLRAVVQ RIVPLNTGALFLSVIGLMMVVVGILLG" gene complement(1251008..1252936) /locus_tag="RTM1035_06138" CDS complement(1251008..1252936) /locus_tag="RTM1035_06138" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="3-hydroxyacyl-CoA dehydrogenase" /protein_id="jcventer:1101493006648_RTM1035_06138" /db_xref="CDD:31227" /translation="MAVLLLDRPVANALSAELRAELAGALDHAATAAEVRAVVLAGSG SGFSSGVDLTEYDGSLAEPWIDALCTRIEDFPKPVIAALHGPTFGAGLALALAAHARI AQAEARLASPEITLGMVPGGGVTQRLPRLLGAQVALEVMLAGQTLRATDPRLRRLFSQ VTADDPLPAAVDLAGKLADQGHWRRSQEATRGLSDPAGYQRAIATVAERLKGQNGAAS DILRAVEAAQLLPFAQGLAFEATLFEDRLRSPEARAQRHIYAAERRASGMPERAQAAT RDISRIALAGARLGDVALLLLEGGKVVRSDAPDLPASVSRALDGLVTHGKMEAATRAA HLARLASGMAPVDLALCTRGSEVADGTLSVPLDDGRGLAGAPLGLRLYRPAQTLRLAE LAVSDTADPAIVASLAQFCTGLGVTLVRAAQPAAGPGLGHILMGAVYLAGLEMVRLGL TPQRVDQAAQRLGFRAGPFLMMDFDGLPVVANRLRAVAEWLGCPAPGADDPLAERLAK GAVGRVVGRGFYDHPSEGPRPPKNLAGPGRDPAEVLGTVAPGHALQAALVGAAVQLLA RGAVQRASDLDVLMVRGYGYDRARGGPLFAADQRGMLAMLRDFKALARMDTPLWQVPP MVVEMVKNGEGMFGRRHD" gene complement(1253058..1253273) /locus_tag="RTM1035_06143" CDS complement(1253058..1253273) /locus_tag="RTM1035_06143" /note="COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06143" /translation="MIMTNTRTELDRLEHQIGQANPDIRHKLEPQLRRMIARLHDEGI GVPDQTKSLHEMLLCEAIEAQFDNMPV" gene complement(1253358..1253684) /locus_tag="RTM1035_06148" CDS complement(1253358..1253684) /locus_tag="RTM1035_06148" /note="COG1734 DnaK suppressor protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06148" /db_xref="CDD:31920" /translation="MLDTERYRLALMARLGELDKRLHAIEAELDSAKSKDWDDAAIER EGDEVLEHLGHQGQDEISRIRAALDRIRKGSFGTCTRCEEMIAVERLDVLPEAPLCRV CAAQVS" gene complement(1253781..1254785) /locus_tag="RTM1035_06153" CDS complement(1253781..1254785) /locus_tag="RTM1035_06153" /note="COG1868 Flagellar motor switch protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06153" /db_xref="CDD:32053" /translation="MAQGMGSQDHSSVIQRMAQAARDGSDSRQMTPVKALRLSLARAA DTLFGLGLTVATVEQMRVPLAHVGRSLGDAGLLVLLEGDGGARGALCLDSQFLAGLIE VQTTGSVRPGLARPRAATRTDAAMVAPLIDAVLTEFESQLAQEHDAPPPRRFGFGDMV EDLRGLSLLLVAPDFELLRLTVDLGPGAKTGRLDLLLPVIASPARASSGKIANTKIEA PANLEQVVNNAPVMLDAVMARLRLPLRDILALKPGDLLPFQRETLNDTQLVGTRGHIV ATAELGQMNGLRALRLISGAAAPLPPSIETEPEPVPTEPRRGTDLIPIESQDRPRETI " gene complement(1254864..1257548) /locus_tag="RTM1035_06158" CDS complement(1254864..1257548) /locus_tag="RTM1035_06158" /note="COG0591 Na+/proline symporter" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /protein_id="jcventer:1101493006648_RTM1035_06158" /db_xref="CDD:30936" /translation="MTTLNVLILVCILYVVFLFAVAFAADRAALRGRGSWLRSPYVYT LSLSIYCTAWTFYGAVGFAARSGLEFVTIYLGPTLIMIGWWWTLRKMVRVGRSQRITS IADLISSRYGKSNLLAVIVTVLAVIGTTPYIALQLQSVTLSFAAFAETDLTATTLPDM HSTALWVAGGLALFTILFGTRNLDANERHHGVVMAIALEAVVKLCALLAVGIFVVWGL SGGVAATLDRIDASAIAHFEVSGSRWIGLTMLSAVAFLCLPRMFQVMVVENEDEDHLR TAAWAFPTYLMLMSLFVVPIAAVGLELMPEGANPDLFVLTLPLMDGRDGLAILSFLGG FSSATSMVIVAAIALSTMVSNHVVMPLWLYFSGGAAMVSGDVRHVALLARRLSIAGVV LLGYVYFRLSGGGTALAAIGLIAFAGVAQFMPALMGGLFWRGATRTGALAGLIVGAVV WIYCLFLPSFGPSMVLPQVVFDEGLFGLHWLRPRALFGSEGMDPVVHAVLWSLLLNTA AFVLGSLLSFPQPVERLQGAQFVNVFDHSGTPGGWTGGMAQSEDLLIMAQRIMGATEA QALFAEAAQRQGLAGYLPEPSPTFLQELERELSGSVGAATAHAMISQIVGGAAVSVED LMAVADETAQIMEYSSQLEAKSQELVRTARQLRQANEKLTQLSVQKDGFLSQISHELR TPMTSIRAFSEILRDTGDLTPEEQSKYASVIHDEAVRLTRLLDDLLDLSVLENGQVVL HVQTGSLADLLDRAERAAGVQGGTLRVVRDRMAEAVALTTDLDRLVQVFINLIANARK YCDGQPPILTIRTAVVDGELVIDFTDNGSGIAPAQQAVIFEKFSRIGQHKAGGAGLGL AICREIMARLGGAVSYLPGQKGAAFRVTLPLSARMAAQ" gene complement(1257549..1257815) /locus_tag="RTM1035_06163" CDS complement(1257549..1257815) /locus_tag="RTM1035_06163" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06163" /translation="MSAERGPMFLARRTYRLRRLSDAARMLPIAGAVLFSVPLLWETE GVRTTRAMFYIFGLWIVLAVIAGVISARLRPTDTEEDPKGSQER" gene complement(1257812..1258180) /locus_tag="RTM1035_06168" CDS complement(1257812..1258180) /locus_tag="RTM1035_06168" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="response regulator" /protein_id="jcventer:1101493006648_RTM1035_06168" /db_xref="CDD:31088" /translation="MTKRVLVIEDEPNIIEAVSFILSRDGWEVKTHANGHDAMDAVRA RAPDLIILDVMLPGKSGFDILQEIRADAVYGDTPVLMLTARGQTKDREMAERAGASQY MTKPFSNADVLAAVRALVVP" gene complement(1258250..1259560) /locus_tag="RTM1035_06173" CDS complement(1258250..1259560) /locus_tag="RTM1035_06173" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family protein" /protein_id="jcventer:1101493006648_RTM1035_06173" /db_xref="CDD:28977" /translation="MPDRLMIGTRIRERRVLNGMRQSDLAQRAGISPSYLNLIEHNHR RIGGKTLLKLAEALKVEPSQLTQGAEATLISGLREAAGKPRNDGPELDRTEEFAGRYP GWASLLSDLHRRTQTLERTIETLTDRLAHDPFLADSLHEVISAVTAIRATSSILVETE AIEPEWQARFHRNINEDSARLTEGAQALVRYLEAAPNTEAELTSPQDEMHAYLAARGY HLPELEREMAGPRDVARLIDAAASEGMSSPAQNLTREALLRYMEDAAALPLRAFLARV ATLGLRPDRLAEATGADMARVFRRLASLPETDVGEVGLVICDASGTLTFRKPIAGFAT PRMAGACALWPLYQVLSQPQVPLRLRLRQAGRGAEVIEAFAVAAQTGPAGFDRPPLMQ ALMLMLPDPGETGGAVRPIGVSCRICPLADCAARREPSIVAEGM" gene 1259886..1260914 /locus_tag="RTM1035_06178" CDS 1259886..1260914 /locus_tag="RTM1035_06178" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06178" /db_xref="CDD:31041" /translation="MATLSAQPAPAPSRALQGILCVEIAMLLFVGQDAMMKTLLTIYP VWLLIFVRSIVTLLVMTPLILWLGKPHRLLTPLWPLHLIRAFLFASGFSMFYAAFPFM GLAEVSTIFFSAPLITALFAAVFLRETIGWHRGVALVAGFVGVLIAMNPTGENFSLVA ILPLLCAVTYAISQIIARQIGDRESTLTVGLYTLTFAGLLILPMGWLVNQVIEITPAT YHLRWEMPPQALDDLPRLALLGAIGMAAYTLVSRAYQVANASLVAPFDYTYLPFAALL AYVLWDEVPALNTLAGMVIITASGLYLGWRELRASRHSDATPVTAEAIFAPGSPLPPQ IPEEETSR" gene 1260911..1261816 /locus_tag="RTM1035_06183" CDS 1260911..1261816 /locus_tag="RTM1035_06183" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06183" /db_xref="CDD:32782" /translation="MTTVTIQPERDMRGYVLVFLAGLVWSTVGLGIRLIDEAQVWQIL FYRSASMTLLLYVVIRLRTGQDALRLALQMGWPGVIGGLSLVAAYTGAIFAIQTTSVA NAMMLFACSPLLAAILGRVVLREYVRPQTWVAIVVAACGIAVMVWDKFGGAALVGNLA AIGSAVGFATFTITLRWGKATEMMPAIFLSGLFGMALMAAICFWLGLSLRISSADTAL SLGMGVFQVGLGLILYTIGSRTVPAAELTLLSLAEVVLGPVWVWLILGETATTNTLIG GTILLGAIAGNALSGARRRPPPPML" gene 1261920..1262186 /locus_tag="RTM1035_06188" CDS 1261920..1262186 /locus_tag="RTM1035_06188" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06188" /translation="MNRSLILASVTSFALAGCMEGVSDRELVGGAAGAAGGALLASAF DADSGWTVVSALAGAAAGTLVARNTARNQCAYSNGDGTYRTVPC" gene complement(1262343..1263233) /locus_tag="RTM1035_06193" CDS complement(1262343..1263233) /locus_tag="RTM1035_06193" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006648_RTM1035_06193" /db_xref="CDD:30928" /translation="MNFKQLTYFIAVAEELHFGRAAERLDMAQPPLSRQIKQIEEELG AILFNRGRSAISLTQAGERLLERGRSILAQLEDTKLEVRRLGQGAEGRLRVGFVGSAT FGILPTIIKSFRANYLEVNLSLNPMNNAQLHRALVSRELDVAFARPALRDPEFVTKEL MEEKLILALPDTVDTGGRTVAKLERLETHNLVLYPEHPRPSYADFVLKAIEGAGFTAP LRLWCMDLQTALSLVAIGEGVCIVPESVSTAPRKGMKFLRIEPEIARTSLSVNHRLDE QGVHVHNFVKIAQRVARKQF" gene complement(1263331..1264206) /locus_tag="RTM1035_06198" CDS complement(1263331..1264206) /locus_tag="RTM1035_06198" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="intradiol ring-cleavage dioxygenase" /protein_id="jcventer:1101493006648_RTM1035_06198" /db_xref="CDD:48025" /translation="MGIVNLENITDVVIASLGKHGEITERQRDIMTALIRHLHAFCKD VNLQHGEFLEGCEYLKRAGQTCDENRQEFILLGDILGVEVLVDMLSNPIDGPESESTV LGPFYRENPPVLPKGASTIQKHYDTEETAYFEGYIRDAAGNGIAGVTLDVWEDAPNGI YENLDPDQPEYNLRGRFETDENGHYAFVAVRPVPYPIPDTETAGELLRYMGHHPYRPG HMHFIISKDGYRQLISQIYDGDSKWLDDDSVFAVKDSLIGKFKPAPKELGTDLHFEFD FVLKADAAAQAVAAE" gene 1264384..1264779 /locus_tag="RTM1035_06203" CDS 1264384..1264779 /locus_tag="RTM1035_06203" /note="COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06203" /translation="MREAEVIDRFREIATRLEDQPHLLRLGRLFSETVLIEIEGDEIY LTFDKGRIVSVVAGPSRKTPWRFALRTDADALEQFWQARPAPGFHDIFGLAKIGRGRI DGDILSLVKNLRFFKEVMALARCKKEAAA" gene 1264776..1265633 /locus_tag="RTM1035_06208" CDS 1264776..1265633 /locus_tag="RTM1035_06208" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="putative carboxylesterase protein" /protein_id="jcventer:1101493006648_RTM1035_06208" /db_xref="CDD:40647" /translation="MSIEPITGRYITVEIAGAPRRIYFEEAGQGRPVLCLHTAGADTR QWRHLMNDAKVTADHRLIAFDMPWHGKSLPPEGFETEEYLLTTEDYIETVLAVVAGLG LERPILAGCSMGGRIALQLAAQHPEYFSGFIAIEASDFQPAWYDIDWFHRPDAHGGEM GAALVSANISPYAPNAERWNTLWMFMQSGPGVFRGDLSFYTRDDSLIGRLAQIDTGKT PVHLLVGAYDLTCTPEDAKRTAAAIPGATVSVMDELGHFPMSEHPQGFRPFFLDALAR MPRVAAQAA" gene 1265648..1266508 /locus_tag="RTM1035_06213" CDS 1265648..1266508 /locus_tag="RTM1035_06213" /note="COG3246 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06213" /db_xref="CDD:45746" /translation="MTNPCIICVAITGSLPQKSDNPAVPITVTEQVESTHEAFEAGAT IVHAHVRNDDGSPSSDPEKFARLKEGIETHCPGMIIQFSTGGRSGAGQTRGAMLSLRP DMASLSVGSNNFPTRVYENPPDLVNWLAEEMRQYEVKPEIEAFDLSHILKAKDMSDQG QLLGTPYVQFVMGVKNAMPVDRDVFDYYIHTVKRLFGPDAPWCAAGIGRHQVTLNDWA VAAGGHARTGLEDNVRLDRDTLAPSNAALVRRVVEFCERHARPVATWREARQMLGLRA QHGLKDGKAA" gene complement(1266540..1267217) /locus_tag="RTM1035_06218" CDS complement(1266540..1267217) /locus_tag="RTM1035_06218" /note="COG1136 ABC-type antimicrobial peptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006648_RTM1035_06218" /db_xref="CDD:31331" /translation="MSALLEVRDLVKTFGTGEAATRVLRGLSLRLETGEMAALLGPSG SGKSTLLTILGTLMKPTSGRHVMLGEDLIAADDRALTEFRNAHIGFVFQFHNLLPDFT ALENVIFPTAVREGRETAAARARGRDLLARMGLAERINFPATSLSGGQKQRVAVARAL MNSPELVLADEPTGNLDRVSAMQVMELITQINQEEGTTFLISTHDDKIASLCRRKIVV GDGQVTG" gene complement(1267214..1268419) /locus_tag="RTM1035_06223" CDS complement(1267214..1268419) /locus_tag="RTM1035_06223" /note="COG4591 ABC-type transport system, involved in lipoprotein release, permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06223" /db_xref="CDD:34229" /translation="MLYALKIAARYLTASKAQTALLVLGVAVGVFIFIFMSALIGGLA QFILSRTVGDIAHVTIEAEPDDPTLLFTPEGHVLMVAERGRTRTASLAEAATWLPLIE AVPGVKAVSPQITGAGFLTRGAQVEQVSVTGIEPGRESAILDLDGYMVEGRARLGAGL IVVGRELADDLDLSLNQPLRLQSSEGVTALLTLSGIFETGNGALDGARAFVSLSTART LFAMPQGVSQIEIKLLDLNAADATALRIRTLTGLDAVPWTDGAEQLMEALSAQAQTGY FLKTFALITIVIGVASALLLSTYRRRPEIGIMRAMGAGRGFVVVVFVTQGALIGLMGG MMGAGLGYLALLPFPPRDAFKAGTLPMDITQGSYGLAITLTVIGAVLASILPARAAAR VDPVTAIGQ" gene complement(1268419..1269450) /locus_tag="RTM1035_06228" CDS complement(1268419..1269450) /locus_tag="RTM1035_06228" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="Secretion protein HlyD" /protein_id="jcventer:1101493006648_RTM1035_06228" /db_xref="CDD:31186" /translation="MAAALVGMAIAGLITAQAWMARPPTVLVETAALAPVTRVLAVNG RIAAVNSVEVTSTVTGTLVALPVIEGDRVEAGQILAQVDAEAQSASVRQAQAALDAAR DALREAQAEFDRATSLTTTIARSVRDTYGYRLEAATQEVARLGAALDQARVLLANHTI RAPVAGSVVMLDVEQGQLVSPATPILTLADLSALLVEADVDEAYATQIAVAQPALLQL AGETQTRAGQVSYVSKRVDIATGGLAVELSFDTPVLAPVGLTVATNIIVDQRDAALTV PRTALVSDAGAPGVFVIRDGTARFQPISVVEWPAARLIVTAGLAQGDTFITEATGIAD GQAVTAGPP" gene complement(1269601..1269852) /locus_tag="RTM1035_06233" CDS complement(1269601..1269852) /locus_tag="RTM1035_06233" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06233" /translation="MLRMVRLNLSGYLGFDPPGQHACVKASGHRRSASVMPGVPAWVN GGARAVYPPLIHVKAVAICPPMLEEQEAAQNPPPPAYVP" gene 1269842..1270873 /locus_tag="RTM1035_06238" CDS 1269842..1270873 /locus_tag="RTM1035_06238" /note="COG3938 Proline racemase" /codon_start=1 /transl_table=11 /product="proline racemase" /protein_id="jcventer:1101493006648_RTM1035_06238" /db_xref="CDD:33720" /translation="MRSTKIIHVVSCHAEGEVGDVIVGGVTPPPGDTIWDQRKWIAED QTLRNFMLNEPRGGVFRHVNLLVPPKHPEAQAAWIIMEPEDTPPMSGSNSICVSTVLL DSGIIPMQEPVTHMVLEAPGGLVRVRADCANGKAERIFVENLPSFASRLGVPLDVPGV GQITVDTAFGGDSFVVVDPVALGVDLVEDNARRIAELGIRITNAANAQFRFEHPEKPD WAHHSFCLFAGPITREGSTLRAQSVVAIQPGKLDRSPTGTAVSARMAILAARGEMGED DRFTGVSIIGSEFHGRILGRVQVGGQEAIRPEISGRAWITGTAQHMLDPSDPWPGGYR LSDTWPRIS" gene complement(1270906..1271943) /locus_tag="RTM1035_06243" CDS complement(1270906..1271943) /locus_tag="RTM1035_06243" /note="COG2055 Malate/L-lactate dehydrogenases" /codon_start=1 /transl_table=11 /product="malate/L-lactate dehydrogenase family protein" /protein_id="jcventer:1101493006648_RTM1035_06243" /db_xref="CDD:42582" /translation="MAEPTVISVDSLLARVTSIFESCGVRPQSAASVARVIVAGERDH CKSHGIYRIEGCLRVIAAGKVVPDAVPVLQDTGRAVIEVDAGGGFSNPAFDAAVDALA ARARETGLAALVIRDCLHFSALWHDVEALAARGLASLSMCPSYSSVAPTGGKEPLLGT NPIAFGWPRPGPHPYVFDFATSVAARGEIELHRRAGTPIPEGWAMDKDGHPTTDPEAA LAGAMLPFGGHKGSAISTMVELLAGAMLGEFMSKEALEFSGGTSLLPRHGALVVALDP ATFAARSGRDPIAEGERLLSAISGQGARLPSERRFAARANALSGGIALSDAELAQLAR FESEGLAAVTV" gene complement(1271971..1272606) /locus_tag="RTM1035_06248" CDS complement(1271971..1272606) /locus_tag="RTM1035_06248" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family with cupin sensor" /protein_id="jcventer:1101493006648_RTM1035_06248" /db_xref="CDD:28977" /translation="MAETEKTSVESAADDWDVERHQLRADLGARMKAVRQACGYTLEV AAQRTGLALSTIHKIENGRVSPSYENLIKIARAYDIGMERLFSADHDATQTTRMTVTR AGQGRKVRAKNFEYEVLCNALAEKKIIPLVTLVEKRAPLTRDELESHDGEETLYVLSG RVELTVEHYEPVIMEPGDCAYFDSTIKHGLRAIDDTETKVFWACTYTDVDK" gene 1272764..1274464 /locus_tag="RTM1035_06253" CDS 1272764..1274464 /locus_tag="RTM1035_06253" /note="COG1786 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06253" /db_xref="CDD:31865" /translation="MPDLIVAAEVQGPILLCDEGLSVWGGVDPQSGRIIDAHHPQRGQ SLAGHVVMMPTSRGSCTGSGVLLGLAFAGTAPKALIFREGEDILTLGALVATRLFDRP IAVLRLSASDYDRLSQQSHAKITATHLRAGDLEMPLTSVASEGLTLSDSDRAFLAGEH GEAAQLAMEIITTLAAAQGAPSLTDVTRVHIDGCIYASPAFLTFARAMADKGARVRVP TTMNAISVDHANWRAQGVAEDFGLPASQLADAYVEMGARPSFTCAPYLLEDKPVAGED IAWAESNAVIYANTVLGARTVKHADFMDLCIALTGRAARSGVYLDQNRAARRIIDIDV PEGIDDAFWPMLGWIVGQVAPDRIPLLRGLEGLNPSEDDLKALCAAYGTTSASPMMHI EGITPEADMPPTPDADHARITAADFARLWSGFNQGAEKVDLVALGSPHFSAAECSAFA ALMEGRQVNPAVATIITLGRGTLSTITASGVKARLEAAGVTIVPDICWCSISEPVFPP SAKVLMTNSGKYAHYAPGLSNRAVRFGSLAQCAQTAQSGMAPTTSPPWIAAAPALAGH " gene 1274510..1275469 /locus_tag="RTM1035_06258" CDS 1274510..1275469 /locus_tag="RTM1035_06258" /note="COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase" /codon_start=1 /transl_table=11 /product="dihydrodipicolinate synthetase" /protein_id="jcventer:1101493006648_RTM1035_06258" /db_xref="CDD:30677" /translation="MNKDVFHGTIPALLTPCTPDRKPDFDALVRKGQEMIAAGMSGVV YCGSCGDWPLLTDAERMEGVERLTKAGVPVVVGTGAINTKSAVAHAAHAQKVGAAGLM VIPRVLSRGLSVAAQRNHFKAILEAAPDVPAIIYNSPYYGYSTKADLFFALRAEHKNL IGFKEFGGKNDLSYAAEHITSQDDDVILMVGVDTEVYHGFVKCGAVGAITGIGTMFPK EALLQVALSRRAATGCPEADMRARELADAFSVIAKFDEGVDLVLYFKHLMVLKGEEEY RLNINETDALSPSQARFCEAQFHQFNAWFANWVKQGGVIAECM" gene 1275460..1276374 /locus_tag="RTM1035_06263" CDS 1275460..1276374 /locus_tag="RTM1035_06263" /note="COG3938 Proline racemase" /codon_start=1 /transl_table=11 /product="proline racemase, putative" /protein_id="jcventer:1101493006648_RTM1035_06263" /db_xref="CDD:45441" /translation="MHVIDSHTGGEPTRVILDGGPDLGSGALSERARLLASEHRDFYQ SVSLEPRGQVAMVCALMVPPTDPTCVTGVIYFDAEAVLGMCGHGTIGLVVTLAHMGRI KPGIHRIETPVGIVTVDLIDANTVTVTNIESRRTHTGVTVEIEGLGAVTGDVAYGGNL FFLVDPSPVQVHSSNIRALTDATIAVRDAVQAQGIDVDHVIFYGPSDDAAAHSRNFVL CPDNAYDRSPCGTGCSARLACLAAEGRLDAGQEIVQESVIGSTYRLSYTPGPSGGVIP SITGRAYVMAESTLLFDPNDPFRNGIRL" gene 1276396..1277637 /locus_tag="RTM1035_06268" CDS 1276396..1277637 /locus_tag="RTM1035_06268" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase" /protein_id="jcventer:1101493006648_RTM1035_06268" /db_xref="CDD:31009" /translation="MARSDIIVIGAGIIGVTSALALQREGHRVRILDRKGVAAETSRG NAGAFAYTDIEPLATPGILRKAPKWLLDALGPLSIPPAYALPLLPWMLRFWRASWQDR YAAAVAAQASLMHHSRAALERLIANVDGEPLMRREGQLQVYEGEAAYRASLPAWTLRR QHGVRFDLLESPNALAEIQPGLSPRFTHAGYTPDWMNTVDPARWTEYLAQQFVAVGGV IETADIRALRQAGDGVEIETATGTTCADQVVLAAGAWSHHLARTLGDAIPLETERGYN TTFPTASFDLRTHLTFADHGFVVSKIGEGLRVGGAVELGGLRLAPNYKRAETLLRKAR DFLPGFDPQGGTQWMGFRPSLPDSLPIISRAPRADRVIYAFGHGHLGLTQSAGTAELV AALAAHRDPAIELQAFDAARF" gene complement(1277687..1278409) /locus_tag="RTM1035_06273" CDS complement(1277687..1278409) /locus_tag="RTM1035_06273" /note="COG1126 ABC-type polar amino acid transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, nucleotide binding/ATPase protein (amino acid)" /protein_id="jcventer:1101493006648_RTM1035_06273" /db_xref="CDD:31323" /translation="MIEIQNVRKSFGDLEVLKGIDLTVQRGEVVTVIGGSGSGKSTLL TCINGLEPIDSGRITIDGTEVHAKSTNLNKLRRKVGIVFQQWNAFPHLTVLENVTLAP RKVLDMAKAEAEAIAEKQLRHVGLGDKLTTYPSRLSGGQQQRMAIARALAMSPDYMLF DEVTSALDPQLVGEVLETLKMLAEEGMTMICVTHEMGFARDVSNRVAFFHQGIMAEIG APDQLFGDPQHPETQKFLANVR" gene complement(1278402..1279055) /locus_tag="RTM1035_06278" CDS complement(1278402..1279055) /locus_tag="RTM1035_06278" /note="COG0765 ABC-type amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="putative amino acid ABC transporter permease protein" /protein_id="jcventer:1101493006648_RTM1035_06278" /db_xref="CDD:31108" /translation="MFDTALTANDLVFLAKGAGITILVTAISVVIGTLLGILFGVIRM QLGPVLAAPLTFFLDIFRSVPLLIQLVLGNAFVGMVLQLQISGFTVACIVLSLYTSAY CAEIVRGGIDAVPEITRRAARSLGLTWGQDMRYIVLPLATRVALPSWIGLALGVMKDS ALVYVVQVTELLKSTQILITRLQEPLFLLLICGAFYFVISFPLARFGGYLEKRWSND" gene complement(1279068..1279733) /locus_tag="RTM1035_06283" CDS complement(1279068..1279733) /locus_tag="RTM1035_06283" /note="COG0765 ABC-type amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="putative amino acid ABC transporter permease protein" /protein_id="jcventer:1101493006648_RTM1035_06283" /db_xref="CDD:31108" /translation="MFNYTFQWKQALNRLPQMLDGALVTMEIAILSMALGIALAILLT VFRLSGSRPLMAFATTWVEIARNTPALFQIYMAHFGVASFGIHFSPFVSILIGITFNN AGYLTENFRGALKAIPDTQGRAGRSLGLTQLQSFRYIILPQMLRISFLPMTNQMVWAI LMTSLGVTVGMNSDLYGVTQDLNALTFRTFELFALAAVIFYLITKTITIGGRLIAARL FRY" gene complement(1279809..1280615) /locus_tag="RTM1035_06288" CDS complement(1279809..1280615) /locus_tag="RTM1035_06288" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="putative ABC transporter periplasmic amino acid-binding protein" /protein_id="jcventer:1101493006648_RTM1035_06288" /db_xref="CDD:47410" /translation="MKKVTLFAALLGMTSIAGTAQADKLDDIISSGTLRCAVVLDFPP MGMRDANNVPIGFDVDYCNDLAAALGVEAEIVETPFPERIPALMSGRVDVGVASTSDT LERAKTVGFSIPYFAFEMAVTANSGTGITSYEGMKGHTVGAVAGTYEAIALEAQVKEW GEGEFRPYQTQADVFLALSQGQLDATVSTSTVAQANVQSGNYKDITVVGFAPFDTDYV ALFAKRDEYGFLNYLDLFVNQQVRTGRYDELYEKWVGGEVPKLMVPNAYR" gene 1280792..1282306 /locus_tag="RTM1035_06293" CDS 1280792..1282306 /locus_tag="RTM1035_06293" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="dehydrogenase" /protein_id="jcventer:1101493006648_RTM1035_06293" /db_xref="CDD:31216" /translation="MTFTPHGKHLIAGTWTGTEETVLSDPAEGAGHAFSVGTPDLVDR AARAAEEAFWTFGTTSRATRAAFLHAIADEIEARGAQITEIGCAETGLPAARLEGERG RTTGQLRLFAEHILKGDYLDRRHDAPLPDRKPLPRPDLRMMQRPIGPVAVFGASNFPL AFSTAGGDTAAALAAGCPVVVKGHGAHPGTSEVVAEAIHAAIVKSAMPSGVFSLVQGG NRAVGQALVQHPLIRAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEA MAARGAAIATGWAGSLTMGAGQFCTNPGIAVVLKGPEAEAFAEATRAALSESGAQVML TDGIAAAYVAGAAQMAAQTGVQDLLTAICDQRQAKPFLYRVAARDWLGNHALGEEVFG PLGLIVVAENAEEMAAVAQSLKGQLTATLHMDAGDTPLARCLLPVLERKAGRVLTNGF PTGVEVCDAMVHGGPYPASTNFGATSVGTLSIRRFLRPVCYQNIPEALLPEDLV" gene complement(1282379..1284658) /locus_tag="RTM1035_06298" CDS complement(1282379..1284658) /locus_tag="RTM1035_06298" /note="COG0513 Superfamily II DNA and RNA helicases" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase, DEAD/DEAH box family protein" /protein_id="jcventer:1101493006648_RTM1035_06298" /db_xref="CDD:30859" /translation="MILPALSNALAARGYETLTPVQEAVTDPALSGSDLLVSAQTGSG KTVGFGLAIAPTLLGGEDRLPPAAAPLALIVAPTRELALQVMRELSWLYAEAGARLVT CVGGMDARDERRALERGAHIVVGTPGRLCDHINRGALDMTSLRAIVLDEADEMLDLGF REDLEFMLAAAPEDRRTLMFSATVPPMIAKLAEKFQRDAQRVTTLTGAKQHADIAYQA LTVSPQDAEGAVINLLRYHDAQNAIVFANTRAMVARLTARLSNRGFAVVSLSGELSQS ERTHALQAMRDGRARVCVATDVAARGIDLPNLDLVVHAELPTNSEGLLHRSGRTGRAG RKGISALIVPLKSANKAERLLKFAKITAEWTTPPTPEDIEAKDRERLLSDPVWSETPS ETEGAFAAELLALHSPEVIAAAYLRLYKSRWSAPEELSAPGAPAPARERSAFGPSRWF ALSVGNDDRAEARWLLPLLCRAGNLDKSAIGAIRVQAAETFVELAEAAVPGFLSSLGE GGQLDEGITARALDSAPAFAPAPRAPREDRPERAPRAPREDRPARAPREYGGSRDHSA PRTAPKPRPKPAGAPPAAMTRAVEDGTVTPYRKPRAEAGDAPRPAKKPWSGDKPAGKP ANKPFGKPAGDRKPGKSFGKPEGRPYDKSDSKPGAKPYGKPGAKPSDKPFDKPRARPT PRDAEPAAPRPNLAADTSKRFVPPGAAKKPGKPGTGKTFAGKPGAGKPAAGKPKGKGA APKARAGFGGSTPPKRGKP" gene 1284833..1285993 /locus_tag="RTM1035_06303" CDS 1284833..1285993 /locus_tag="RTM1035_06303" /note="COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase" /codon_start=1 /transl_table=11 /product="amidohydrolase family protein" /protein_id="jcventer:1101493006648_RTM1035_06303" /db_xref="CDD:31662" /translation="MPVKNRFAELHTDITEWRRDIHAHPEILYETHRTSALVAEKLKA FGCDEVVTGIGRTGVVGVIKGRSTASGRVIGLRADMDALPIHEATGVDYASKTPGAMH ACGHDGHTAMLLGAAQYLAETRNFDGTAVVIFQPAEEGGAGGREMCEDGMMDRFGIQE VYGMHNWPGRPVGSFAIRPGAFFAATDQFDIALTGKGGHAAKPHETVDTTVMAAHLVT MFQTIASRNADPVDQIVVSVTSFQTSSTAFNVIPQGVHLRGTVRTMSPEMRNLAEQRI RALCEHVTAGFGGKAEVSYHRGYPVMINHEEQTEFAASVAAKVSGGCEEAPLVMGGED FAFMLEERPGAYILVGNGDTAMVHSPDYNFNDEAIPAGCSWWAGIVEERMPA" gene complement(1286006..1287367) /locus_tag="RTM1035_06308" CDS complement(1286006..1287367) /locus_tag="RTM1035_06308" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="cytochrome P450" /protein_id="jcventer:1101493006648_RTM1035_06308" /db_xref="CDD:40168" /translation="MPRQTPHTLPAHVPLVTEPMGVLASLKAARRNILSIIPEIATRQ PMVSGRTGKRWHMVMDPGAIRRMLLEELDNYPKSIVTKNLLRPAIGESLFIAEGAHWR WQRRTAAPVFSHRNVMNLAPIMTAAAEQSAARVAAAGPRAVDMAAEMVRTTFDVIADV TFSGDGMFNVDAVHRGIDAYISEAGKISLFDILGFPDWVPRPGRVMSGGSVAEMKRVA DEAVEARRARGSEGVPDLLDLLLDGEDPETKRRMSTPELRDNLLTFIVAGHETTALTL GWSLYLCAFDQAVQDRARAEAQAVLGGRAATGADVARLPYIRQIIDEALRLYPPAGII SRTAQVADTLCGRDIRPGDTVIIPIYALHRNHQLWPEPDAFNPDRFADRKTIERYAYL PFGDGPRICIGASFALQEAVIILATLLSRFRFTPVPGRDPDPVMILTLRPQGGVWLMA EPV" gene 1287496..1288245 /locus_tag="RTM1035_06313" CDS 1287496..1288245 /locus_tag="RTM1035_06313" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06313" /translation="MIRLFALFGLALMAACTNPNDLDEAPAYLGNFHLGHNVVVAPNL TKGPASREASKEEWIAAMTEAMTDRFGRYEGTKLYHLGVSVEGYVLAIPGVPLVASPK SALILNVTAWDDAKGGKLNAKPHLVTVVESFSGNTFLGSGLTQSKEKQLENLSRNAAK QIQNWLVQQNNEFGWFEDDGVPANDKERPEAREEAAPQAETPKAEAPTVPATGSEDAP VPTQTETPSAADLANAAAEVIEEPTVALPAE" gene 1288387..1289043 /gene="tuf" /locus_tag="RTM1035_06318" CDS 1288387..1289043 /gene="tuf" /locus_tag="RTM1035_06318" /EC_number="3.6.5.3" /note="COG0081 Ribosomal protein L1" /codon_start=1 /transl_table=11 /product="elongation factor Tu" /protein_id="jcventer:1101493006648_RTM1035_06318" /translation="MIDRRVFVSLSAASFLVGCQTTADTAGSTIGTGVPQQSKIQTNA LGSNQSSSTIHPNKALTLEQTKDFRIEKLTVVLAPEYERVPTELSFTDQRIMETVQAY MNAIVRPADPMGDRPVHINIALKGAYIKPEGRMSFIPPGGAPEISTVLARATVTDATT GEQLGRGLDLRGQASAATNILMVGLVGTSAKAKAPEEEVKLFASALAGNARVRLFGPK " gene 1289169..1290344 /locus_tag="RTM1035_06323" CDS 1289169..1290344 /locus_tag="RTM1035_06323" /note="COG0050 GTPases - translation elongation factors" /codon_start=1 /transl_table=11 /product="translation elongation factor Tu" /protein_id="jcventer:1101493006648_RTM1035_06323" /db_xref="CDD:30399" /translation="MAKEKFARNKPHVNIGTIGHVDHGKTTLTAAITKYFGEFRAYDQ IDGAPEEKARGITISTAHVEYETEARHYAHVDCPGHADYVKNMITGAAQMDGAILVVN AADGPMPQTREHILLGRQVGIPFMVVYMNKVDQVDDEELLELVEMEIRELLTSYDYPG DDIPIVRGSALHAMNGTQPEIGENSIRALMEAVDSYIPTPARAVDQPFLMPIEDVFSI SGRGTVVTGRIERGVINVGDSIEIVGIRDTKTTTCTGVEMFRKLLDRGEAGDNIGALL RGVDREGVERGQVLCKPGSVKPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTD VTGTVMLPEGTEMVMPGDNLKFTVELIAPIAMEDGLRFAIREGGRTVGAGVVSKIIE" gene 1290416..1292263 /locus_tag="RTM1035_06328" CDS 1290416..1292263 /locus_tag="RTM1035_06328" /note="COG1132 ABC-type multidrug transport system, ATPase and permease components" /codon_start=1 /transl_table=11 /product="abc transporter atp-binding protein" /protein_id="jcventer:1101493006648_RTM1035_06328" /db_xref="CDD:31327" /translation="MKRIFQYFEARIDAYPALQPSQPPARFWPFLWHYARPVAPWLIA MSVISAVFAAVEIVLLGYLGTLVNRMSELGPERFLGEEAARLGGMGVLLLIVLPLLSV MGALIMYQTLMGNFPQRIRWQGHRWLLGQSMGYFQEEFAGRIATRLMQTSLAVRETVM KLMDVAVYILAYFIGTLVLAGTQDIRLAAPFAIWALAYGALLGVIVPRLGRVAQEQAH ARADMTGRIVDSYTNIATVKLFSHAAREEAYARAGLDGFLQTVHRQMRLVAVQDMSVN LLNALLTGAVTGLGLWLWVQGRIDLGALAVAIPLALRLGNMSHWIMWEFAALFENVGT ARDGLATLAMPRTVQDSPTATPLMVHKGAVRCEAVRFVYDSSSTRKVPVIDGLDLTLA PGEKVGLVGRSGAGKSTLINLLLRFHDLSGGRILIDGQDVSQVTQDSLRAAIGVVTQD TALLHRSVRENIAYGRPDATDAEIRAATDLAEATEFIAGLEDARGRRGLEAHVGERGV KLSGGQRQRIAIARAALKDAPLLVLDEATSALDSEVEAAIQTQLYRLMQGKTVIAIAH RLSTIAAMDRLIVMDEGRIVEQGTHAQLLAQDGLYARLWARQSGGFLMD" gene 1292547..1293785 /locus_tag="RTM1035_06333" CDS 1292547..1293785 /locus_tag="RTM1035_06333" /note="COG1804 Predicted acyl-CoA transferases/carnitine dehydratase" /codon_start=1 /transl_table=11 /product="putative dehydratase/racemase" /protein_id="jcventer:1101493006648_RTM1035_06333" /db_xref="CDD:31989" /translation="MGGILKGMRVVEGSAFVAVPLAGMTLAQMGAEVIRFDRMGGGLD AGRWPLAPSGQSLFWAGLNKGKKSIAVDMTRPEGQDLVTRIITAPGEDAGLFLTNLRV RGWMDYETLSQYRADLVMVTLMGDRHGRPAVDYTVNPALGIPEMTGPVGWPEPVAHAL PAWDIAAGHLVVSSLLAAERERLRRGRGQEVELSLKDVAAATIGHLGLIGDAALNDKE RGKSGNALYGAYGQDFVCACGRRVMVIGLTHRQWRGLVKATGTEAAMAALAARSGRDL NDEGNRWHLRREITAILRPWFATRELSSFAEAFDAAGLTWSVFRTVREALAEDPDLSE DNPMFKLLMQPGLGRFPVPGHPAAFSAHERAAPQPAPQLGAHTEEVLGDVAGLSDTEI AQLFDTGVVQSPRFGARPAA" gene 1293871..1293943 /locus_tag="RTM1035_t07494" tRNA 1293871..1293943 /locus_tag="RTM1035_t07494" /product="tRNA-Trp" gene 1294178..1294762 /locus_tag="RTM1035_06338" CDS 1294178..1294762 /locus_tag="RTM1035_06338" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06338" /translation="METHLPRVPNQKTYFSHHNSELPGRSPADAVSTEQAVENAMSTI REILTEERRKTRRHVLPDLAPHVPVEHLEPVRAQTPKRRAAVLSRVMNLRPRALKLKP HHAGWLAAFALVLWQPMPVLIAMFIGFWMVFLGYALFGPERMTHLRSRVTRRMARLLE QRRALPELRLRREPEPDVFADRPDPFERIAPKTR" gene 1294859..1295056 /locus_tag="RTM1035_06343" CDS 1294859..1295056 /locus_tag="RTM1035_06343" /note="COG0690 Preprotein translocase subunit SecE" /codon_start=1 /transl_table=11 /product="SecE subunit of protein translocation complex" /protein_id="jcventer:1101493006648_RTM1035_06343" /db_xref="CDD:31034" /translation="MARTNPVQFIQQVRSEVAKVVWPNRREVMLTTVMVFIMATITAI FFALVDLGIRSGLQGVLSLFG" gene 1295248..1295781 /locus_tag="RTM1035_06348" CDS 1295248..1295781 /locus_tag="RTM1035_06348" /note="COG0250 Transcription antiterminator" /codon_start=1 /transl_table=11 /product="transcription termination/antitermination factor NusG" /protein_id="jcventer:1101493006648_RTM1035_06348" /db_xref="CDD:30599" /translation="MAKRWYSVSVLSNFEKKIAEQIRQSVTENGLEDEIDEVLVPTEE VIEIRRGKKVTAERRFMPGYVLVHMEMSDRGYHLISSINRVTGFLGPQGRPMPMRDAE VNAILNRVQEGEESPRTLIHFEIGEKVKVNDGPFEDFDGMVEEVDEDNQRLKVSVSIF GRETPVELEFTQVTKQM" gene complement(1295818..1296402) /locus_tag="RTM1035_06353" CDS complement(1295818..1296402) /locus_tag="RTM1035_06353" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06353" /translation="MPSKASRRARVRFPSFAILLYLDAHGPRAAQNDLHSGVDVVRVQ VFPLGFRDFAHLRDGHGASRRTTRGLGPGLQLGRFLEEIGRRRRLDRQLKGLVLIVGN HDRARCARLKIRSLGVERLAEFHDIDAALTQCRAYGRAGVGLPGFHLQLERPDKFLGH MASPFGPTPSGRAPLALVLCGAAWWPRPPYLPRL" gene 1295923..1296348 /locus_tag="RTM1035_06358" CDS 1295923..1296348 /locus_tag="RTM1035_06358" /note="COG0080 Ribosomal protein L11" /codon_start=1 /transl_table=11 /product="ribosomal protein L11" /protein_id="jcventer:1101493006648_RTM1035_06358" /db_xref="CDD:47926" /translation="MAKKLIGTLKLQVKAGQANPSPPVGPALGQRGINIMEFCKAFNA KTADLEPGAPCPVVISYYQDKSFELAIKTPPASYFLKKAAKLQSGSKTPGRASAGTVT IAQVREIAEAKWKDLNANDIDAAMQIILGSARSMGIEVK" gene 1296350..1297048 /locus_tag="RTM1035_06363" CDS 1296350..1297048 /locus_tag="RTM1035_06363" /note="COG0081 Ribosomal protein L1" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L1" /protein_id="jcventer:1101493006648_RTM1035_06363" /db_xref="CDD:40768" /translation="MAKLGKRTRALREAFDGKDNMSVEDAIALIKGNATAKFDETVEI SMNLGVDPRHADQMVRGVVGLPNGTGKTVRVAVFARGTKADEAQAAGADIVGAEDLME TIQSGKIDFDRCIATPDMMPIVGRLGKVLGPRNLMPNPKIGTVTMDVAQAVKDAKGGQ VQFKAEKAGVVHAGIGKASFDAAKLAENVRAFVSAVQRAKPTGAKGTYVKKISLSSTM GAGVTVDVNSAVVE" gene 1297327..1297821 /locus_tag="RTM1035_06368" CDS 1297327..1297821 /locus_tag="RTM1035_06368" /note="COG0244 Ribosomal protein L10" /codon_start=1 /transl_table=11 /product="ribosomal protein L10" /protein_id="jcventer:1101493006648_RTM1035_06368" /db_xref="CDD:30593" /translation="MVEELGQIFESSGVVVVAHYAGLTVAEMQDLRARARAAEASVRV AKNKLAKIALEGKPCASIANYLTGMTVLTFSEDPVAAAKVCEDFAKANKKFEILGGAM GGTALNRAGVEAVSKMPSREELIASIVGCIGAPASNIAGAIGAPASNIAGILSTIIEK AEAA" gene 1297896..1298276 /locus_tag="RTM1035_06373" CDS 1297896..1298276 /locus_tag="RTM1035_06373" /note="COG0222 Ribosomal protein L7/L12" /codon_start=1 /transl_table=11 /product="ribosomal protein L7/L12" /protein_id="jcventer:1101493006648_RTM1035_06373" /db_xref="CDD:30571" /translation="MADLKKLAEEIVGLTLLEAQELKTILKDEYGIEPAAGGAIMMAG PAGDAGGSDAEEQTEFDVILKSAGASKINVIKEVRAITGLGLKEAKDLVDAGGKAVKE QVSKDEADDIKAKLEAAGAEVEIK" gene 1298519..1302655 /gene="rpoB" /locus_tag="RTM1035_06378" CDS 1298519..1302655 /gene="rpoB" /locus_tag="RTM1035_06378" /EC_number="2.7.7.6" /note="COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta" /protein_id="jcventer:1101493006648_RTM1035_06378" /db_xref="CDD:30434" /translation="MAQSFLGQKRLRRYYGKIREVLEMPNLIEVQKSSYDLFLKSGDQ PQPQDGEGIKGVFQSVFPIKDFNETSVLEFVSYELEKPKYDVDECMQRDMTYAAPLKV KLRLIVFDIDEDTGAKSVKDIKEQDVFMGDMPLMTPNGTFVVNGTERVIVSQMHRSPG VFFDHDKGKTHSSGKLLFTCRIIPYRGSWLDFEFDAKDIVFARIDRRRKLPVTTLLYS LGLDQEGIMNAYYDTVDYKLKKKKGWVTKFFPERVRGTRPTYDLIDANTGEVIFEASK KITPRAVKQLIDEGNVTELLVPFEHIVGKFVARDIIDEETGAIYVEAGDELTLEYGKD GEISGGTLQDLLDAGITDIPVLDIDGINVGAYIRNTMAADKNMNRESALMDIYRVMRP GEPPTEEASAALFDTLFFDAERYDLSAVGRVKMNMRLNLDKPDTQRTLDRDDIVACVK ALVELRDGKGDIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSVEIDTVM PQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFE VRDVHPTHYGRMCPIETPEGPNIGLINSLATFARVNKYGFIETPYRKVIDGQVTDEVQ YMSATEEMRHTVAQANANLDEGGRFVNDLVSTRQSGEYMLAPRESVDLIDVSPKQLVS VAASLIPFLENDDANRALMGSNMQRQAVPTLRAEAPLVGTGIEGVVARDSGAAIMAKR AGVIDQVDAQRIVIRATADLEIGDPGVDIYRMRKFQRSNQNSCINQQPLVKVGDTVQK GEVIADGPCTDMGELALGKNVITAFMPWNGYNYEDSILISERIVRDDVFTSIHIEEFE VAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGADVEPGDILVGKITPKGESPM TPEEKLLRAIFGEKASDVRDTSLRVKPGDYGTVVEVRVFNRHGVEKDERALQIEREEV ERLARDRDDELAILDRNIYARLRTLIMGKVAVKGPKGVKANSDITEELLSTLTKGQWW QLALKDEADAKIVEALHDQYEAQKRTLDARFEDKVEKVRRGDDLPPGVMKMVKVFIAV KRKLQPGDKMAGRHGNKGVVSKVIPIEDMPFLADGTPVDICLNPLGVPSRMNVGQILE THMGWAARSLGLKIDEALQDYRRSGDLTPVREAMRIAYGDDVYAEGIESMDETTLIES AGTVTSGVPIATPVFDGAKEADVNDALRRAGFDTSGQSVLFDGRTGEQFSRPVTVGIK YLLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQ EMLTVKSDDVAGRTKVYESIVKGEDNFEAGIPESFNVLVKEVRGLGLNMELLDAEEDE " gene 1302767..1307014 /locus_tag="RTM1035_06383" CDS 1302767..1307014 /locus_tag="RTM1035_06383" /EC_number="2.7.7.6" /note="COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit" /codon_start=1 /transl_table=11 /product="DNA-directed RNA polymerase subunit beta'" /protein_id="jcventer:1101493006648_RTM1035_06383" /db_xref="CDD:30435" /translation="MNQELTNNPFNPVAPAKVFDEIKVSLASPERILSWSYGEIKKPE TINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRE RMGHIELAAPCAHIWFLKSLPSRIGLMLDMTLRDLERVLYFENYVVIEPGLTDLTYGQ MLTEEEFMDAQDAYGMDAFTANIGAEAIREMLQNIDLEAEAEQLRADLKEATGELKPK KIIKRLKVVESFIESGNRPEWMVMTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVI NRNNRLKRLIELRAPDIIVRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLSDML KGKQGRFRQNLLGKRVDFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYSRLEAKG LSSTVKQAKKLVEKERPEVWDILDEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAI QLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNVLSPANGAPIIVPSQD MILGLYYVTLQRDGMKGEGMVFSSLGEVQHALDAGEVHLHSKVTVRVPQIDEHGNEVM VRVVTTPGRARLGALLPQNAKAPFSLVNRLLRKKEVQQVIDTVYRYCGQKESVIFCDQ IMTLGFREAFKAGISFGKDDMVVPDNKWSIVEETRSQVKGFEQQYMDGLITQGEKYNK VVDAWSKCNDQVTEAMMSTISAELRDENGAVREPNSVYMMAHSGARGSVTQMKQLGGM RGLMAKPNGDIIETPIISNFKEGLTVLEYFNSTHGARKGLSDTALKTANSGYLTRRLV DVAQDCIVREHDCGTERAVTVEAAVNDGEVVASLAERCLGRVAAEDIFDPISDAVLIA RGQLIDERMADSLEEAAVQTVRLRSPLTCEAEDGVCAMCYGRDLARGTMVNIGEAVGI IAAQSIGEPGTQLTMRTFHIGGVAQGGQQSFLEASQEGTITYDQPQTLENANGETLVM GRNMKLRIIGDKGVELASHKVGYGTKLFVKEGAKVTRGQKLFEWDPYTLPILAEKSGT AKFVDLTSGVSVRDVTDEATGMTQKIVTDWRAAPRGNELKPEVFIVGEDGEPMRNDAG NPVTYPMSVDAILSVEEGQQVQAGDVIARIPREGGKTKDITGGLPRVAELFEARRPKD HAIIAEIDGYVRYGRDYKNKRRVTIEPTDESLEPVEYMVPKGKHIPVQEGDYVQKGDY IMDGNPAPHDILAIMGVEALANYMIDEVQEVYRLQGVKINDKHIEVIVRQMLQKWEIQ DSGDTTLLKGEHVDKVEFDEANAKAEAKGGRPAMGEPILLGITKASLQTRSFISAASF QETTRVLTEASVQGKRDKLVGLKENVIVGRLIPAGTGGATQEMRRIATARDSIVIEAR QEEAAAAAALAAPVIDNDVVGGDEFDNFVETPESRDQ" gene complement(1307111..1309147) /locus_tag="RTM1035_06388" CDS complement(1307111..1309147) /locus_tag="RTM1035_06388" /note="COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase" /codon_start=1 /transl_table=11 /product="ABC oligopeptide/dipeptide transporter, fused ATPase subunits" /protein_id="jcventer:1101493006648_RTM1035_06388" /db_xref="CDD:33913" /translation="MSQPPLLDIRRLCIGFRGRSGQVLPVLHEVDLTVCRGETLGIVG ESGSGKSTLALAAMGYLKHGLQKLSGEVIYDGADMFARSDRELAKIRGGQLGLIPQNS GQSLTPTLRIGRQIFEALRLHCNLPRAEHPKRARDLLAQVRLPDPDAILRRYPHELSG GQQQRVAIAMALAGEPDALLLDEPTTGLDVTTQAHILDLLRDLARTRNMAMVYVSHDL GVIARVCDRVQVLYAGEAVLTGPTRDLLRRPAHPYARSLLASIPRLGDRTLPRALEGR PPGPATARVGCAFAPRCALATETCQTVRPPLVEGEAGQMTRCHYPDQVAAMPPAQAGQ ALTCCTGDSPLALSLDSVAIRYGRPGVFARLTGQPLPPATVDGITLNLRRGETLGLVG ESGSGKSTILKSIAGLLPPAKGQISLGDGTALPSMVEHRRPDHLRRLQMIFQNPDDSL NPRQTVQDILAQPLRLYFGLKDRALRDRAAELLETVRLGAHYLDRRPGQLSGGEKQRV AVARAFAAEPDVVLCDEITSALDVSVQAAVLELLNDLKGLHGTAFVFVSHDLTVVRAL SDRVAVLYQGRLCEIGPVAAVYTAPSHPYTEALLGAVLEPDPDLAPRLLAQDTVELSP PARGCPFQRRCPVKRGEICETETPPARDAGNEHLIHCHIPVAELRDFQSLTPKS" gene complement(1309149..1310000) /locus_tag="RTM1035_06393" CDS complement(1309149..1310000) /locus_tag="RTM1035_06393" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="hypothetical ABC transporter permease" /protein_id="jcventer:1101493006648_RTM1035_06393" /db_xref="CDD:31366" /translation="MIRLLEILRAMTHRPSGAIGLGIVVFHLCLAIISPWIVPFDYKE MNALQTLAGPSSEHWFGTDHLGRDVFSRVLLGGREALLITGIATPIALLWGGLLGVYL GLRGGWEDEITLRLVDAFLALPGILPLLVLITVFGSGGEVLLPTLAFFFGIPVIRVAR AAAHEVVARDFIAAARARGHRPIDIVRRELLPNVTDVLLVEGAMRWSWMLLGFSALSF LGFGVAPPRPDWGLMVSDARVYMSLAPWGVIAPVVALSSLIIGINLTADALAKTLGLD QSRAAVV" gene complement(1309997..1310956) /locus_tag="RTM1035_06398" CDS complement(1309997..1310956) /locus_tag="RTM1035_06398" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06398" /db_xref="CDD:30946" /translation="MFSLIFKRLALGLVTIWLVSVLIFLGVEALPGDACTAVLERDAH GEALEKCREVMGLNAPALSRYLSWAASAVQGEFGVSANGQERISDLVGYRLRNSLMLA AGALSVGIPLSIFLGAVAGLRRDTWLDILFSTGAILAMTIPEFVAATILILVFAIWLG WVPAIVLTPADAQPLEFFPEFILAAVVLTMLMVAHIMRMVRSSVIDVMASDYVQMATL KGVPYWQIVFRHALPNALLPAINIIALTVAWLLGGVVVVEVVFNYPGLGRLLIDAISG RDLPVVQAITLIVAATYVAINLIADILSLALNPRLRSHHMRQG" gene complement(1311103..1311792) /locus_tag="RTM1035_06403" CDS complement(1311103..1311792) /locus_tag="RTM1035_06403" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter related protein" /protein_id="jcventer:1101493006648_RTM1035_06403" /db_xref="CDD:48257" /translation="MTLLSLSQITASYGASQALFDVNLSISEGEVVALMGRNGMGKST TVKVICRLLRQSGGTATFAGRDLSGMPAHRAARAGIGLVPEGRRCFASLTVRENLIAA ARPGPWDMAAVTRLFPRLAERQDQIAASLSGGEQQMLAIGRALMTNPRLLILDEATEG LAPVVRQEIWAALARLKSETGMALLVIDKSIRELARVADSAVILEKGRSVWTGTFRAL TPEITDTYLGV" gene complement(1311789..1312553) /locus_tag="RTM1035_06408" CDS complement(1311789..1312553) /locus_tag="RTM1035_06408" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter related protein" /protein_id="jcventer:1101493006648_RTM1035_06408" /db_xref="CDD:48252" /translation="MTDPILAISGLSKSFGALTASRDITLDLKPGEIHALIGPNGAGK STLIAQIAGALRPDAGRILFAGQDVTALDTAARARLGMARTFQISALPMEYTVLQNAI LGALGQRGDVVRFLRPVLRDADLRTRAEAALDTVGLSDARNTRCAELSHGQRRQLEVA IALTLRPRAFLMDEPMAGLGADGTRALTTLLDGLRAEAPILLVEHDMDAVFALADRIS VLVYGQIIATGTVDEIRRDPEVRSAYLGDDMDEATA" gene complement(1312546..1313529) /locus_tag="RTM1035_06413" CDS complement(1312546..1313529) /locus_tag="RTM1035_06413" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="jcventer:1101493006648_RTM1035_06413" /db_xref="CDD:33917" /translation="MSRETLLNAALMAILLLFPLYAWATDEPFLITLTTRAVILAIAG VGLNIALGFGGLVSFGHALFFGLGGYAMGILAYHAQTYTSVTDWPLTIPGTKSMPVIW IIATLTSALAALAVGALSLRTTGVYFIMITLAFSQMFYYFAISWPAYGGEDGLSIYVR NGFPGLNTMDPIQFFALCYGLLALILFFTARLARSPFGLMLGAARQNEARVAAIGQRP YRLYLIAFTLSGAITGLAGALFADLNRFVSPVMFSWQTSGEIMVFVILGGVGRVFGPV AGAALFILLEHSLGGLSDYWHIYLGAILLGTVLFARGGLFGLLAGRGQPHD" gene complement(1313526..1314446) /locus_tag="RTM1035_06418" CDS complement(1313526..1314446) /locus_tag="RTM1035_06418" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="jcventer:1101493006648_RTM1035_06418" /db_xref="CDD:30905" /translation="MSAVLLIEQALNGLQFGVMLFLMAAGLTLIFGVMGLINLAHGSL YMIGAFAAAWVAGLTGSFLLALAASLAAAAVAGVLIELLVIRRLYDRDHLDQVLATFA LILILSEGTRWVFGSFPLYLDTPDWLSGTLRLPFGIDYSRYRLAIIGAGLVIAAALFA MISKTRLGIRIRAGENDREMIAALGVNISALYTLVFALGAALAGLAGALIGAIQSVQV GMGEPVLILAFVVIVIGGIGSIKGAFIGALLVGLTDTLGRALLPSAFATFLEPAAANS VGASLASMAIYILMAGVLIFRPRGLFGAAT" gene complement(1314455..1314937) /locus_tag="RTM1035_06423" CDS complement(1314455..1314937) /locus_tag="RTM1035_06423" /note="COG0824 Predicted thioesterase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06423" /db_xref="CDD:31166" /translation="MPDALPFLSAFHPVEEGWIDYNGHMNMGYYTVLFDRCADEAFEE MGFGPDYRATRNLTTFSAEFHIRYLREVKLGDQLRSSFYLLDHDGKRFHFFQQLYHSD GWIAATGEGLTLHVDLNGPRVVPMPEDVAARVAAMAKAHAALPRPDGIGRRIGLKPKG " gene 1315086..1315571 /locus_tag="RTM1035_06428" CDS 1315086..1315571 /locus_tag="RTM1035_06428" /codon_start=1 /transl_table=11 /product="YHS domain protein" /protein_id="jcventer:1101493006648_RTM1035_06428" /db_xref="CDD:44849" /translation="MITRRRILAGAVLVGAGALGYFAWGRAGLEELAAVPVFATEGVA LGGTDPVGYFTEGRPVAGLPAHSFDWNGATWHFASAENRDAFAADPARYAPQYGGFCA WAVAEKGQLFSTQPENWAIVEGKLYLNYNDDIAAKWQADVPGFIARGDARWPEVLKGE G" gene 1315842..1316405 /locus_tag="RTM1035_06433" CDS 1315842..1316405 /locus_tag="RTM1035_06433" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06433" /translation="MSLPNWTMAGVLPPVRPGSHPAGPDRSPYMISLYELVNRFAISP ERAVILKGLIEYRSDLYATGIVDGFQWVNGSFLEDVESNENRPPNDVDVVTYIVLPSG TSQAGLLPALAPLMDKNATKAKYKVDAHVFSLQQVTVPNVCYWYSLWSHRRDGLWKGF AQIPLDPSGDPVALAALDHLTATGFGP" gene 1316402..1317313 /locus_tag="RTM1035_06438" CDS 1316402..1317313 /locus_tag="RTM1035_06438" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06438" /translation="MNTRAENLKAEIKQVQSILDGIPEENVIDRYSIKQRLDDLNENL SLLSDSRSDAERLALTFRGDPVIGSRAISADFAGKAAATFHDAFSAILAGINSRLRYS GPIPDKAQFPLMITGTALGSFGFEMEVPEHAPNLFDEPIGSSDAITIFKQLLRVSATG SDDDISDIVEEIHPRAVRKVADFLSVLSKQNAWCGLEFRNDFFRYGDLEELRLSESRL RKENIDERIETYSGEFQGFLPVGRNFEFKVLDDGFVLKGRLSEDIEDTSVLNREWLHK PVTVKFSVVQVGQGRPRFTLASLNDIT" gene complement(1317364..1318224) /locus_tag="RTM1035_06443" CDS complement(1317364..1318224) /locus_tag="RTM1035_06443" /EC_number="3.4.24.-" /note="COG0501 Zn-dependent protease with chaperone function" /codon_start=1 /transl_table=11 /product="heat shock protein HtpX" /protein_id="jcventer:1101493006648_RTM1035_06443" /db_xref="CDD:30847" /translation="MGYLRTGILMAAMTALFLGIGALLGGMGGALFALIVALAMNAFS WWNSDRMVLRMHNARPASGPEGAALTQMVHDMADAAGMPRPAVYILDNDQPNAFATGR NPANAAVAATTGLLRHLSREEIAAVMAHELAHIRNHDTTIMTVTATFAGAISMLANFA MFFGGNRNNGMGLIGTLALMILAPLAAGLVQMAISRSREYEADRIGAEICGNPLWLAS ALEKISGLAARIDNDAAERNPATAHMFIINPLHAHAHDKLFSTHPNPANRIRALREMA GERAQRGPWS" gene 1318403..1320004 /locus_tag="RTM1035_06448" CDS 1318403..1320004 /locus_tag="RTM1035_06448" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06448" /db_xref="CDD:47634" /translation="MATAAELPIDTSASAMDMAEAVFGHGITIVSASYTGAASASGIY SNGDAVSPELTPSDTGVILSTGMATSVTNEVSLLNLLGDPNLLLDSSTDHGLAGDADL STISGQETFDAAIFEAEFIPEGSTLTMQIVFSSEEYLEWVNTGFNDSVGVWVNGVQAE LTVGTGDITINNINNISNSNLYMDNSSSADTYNTEMDGFTVTLTLKAPVVPGEVNTIK IGIADGGDGALDSNLLIAGNSIQTSLIAGDDIIDVTRFSQVETDLLANDSNAAGGTLT ITEVNGQPVVAGDTVILSTGETLQITATGFVLVSSGEEVGASNMLSYTVADTFGNTDV GFITINTVAPCFTEGTQIDTPEGAVAIETLKPGDLVLTLDHGPQAVRWIGRSLRRAEG ADAPVALAANALGRHDALELSPNHRILLASPHAELLFGTHQVLVKAAALINECSITRR VDGAPVVYVHLLFDQHEIVRGNGLWSESYHPGPVTHGSFDAATEAELRRLFPVIFAEG GAGYGPSARSGLRAHEAQVLVDAMR" gene 1320057..1320698 /locus_tag="RTM1035_06453" CDS 1320057..1320698 /locus_tag="RTM1035_06453" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06453" /translation="MIISPGRKFIFVHIPKTGGTAMALALEGRAQAEDILIGDTPKAR RRRARLKGVEARGRLWKHSTLADIDGLVSQETLSAAFVFTLVRNPWDRMVSYYHWLRG QEFDHSAVHLAKDLPFPAFLAASETQAALRATPARHYVTAADGREYCRLFIRLEHLET DAAPLWAHLGFAVTVAPFNTSERGPYKDYYDSRTAQIVADCAAEDIARFGYQF" gene 1320876..1321571 /locus_tag="RTM1035_06458" CDS 1320876..1321571 /locus_tag="RTM1035_06458" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06458" /translation="MGCIGKGIDAGMLGWFGISERGAARTQVEEPAGVQSGLLSGTRV ATGHGWRPVQALCAGDRVVTFDAGVQPLCGVTRIPVWTGEGACPSRFWPLDVGRGVLG NRAPVRVMPHQVLMLESDLAETLWGDPFALLPGVALEAVPGVTRVPPTQGAEVVVLHF ENEQVIFAENGLMALCPASCNLLDYAQERAGPRYHVLPLAEARGLVLAMARLEMSTTL QDGVTPPGPRVSV" gene 1321679..1322677 /locus_tag="RTM1035_06463" CDS 1321679..1322677 /locus_tag="RTM1035_06463" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase, type I" /protein_id="jcventer:1101493006648_RTM1035_06463" /db_xref="CDD:30406" /translation="MSEDPIRIAINGFGRIGRTILRILMREGAAFELVCINDIEPLET CAYLFQYDSVFGPWPGVVSTRPGVLIVDGQEIPFHAARDLSTLDLSGVDLVLECTGMG GTRAVAERGLVAGARAVLVSGPSAEADATLVIGANEGDLGSHRIISNASCTTNALAPL ARLLDEAYGIVSGQMTTVHCYTGSQPTVDKPRDAPERSRAAALSMVPTTTSAQHQTGL VLPGLKGRIEARAIRVPVASVSCIDLVVQLQADVTVAGVNTLLQEAAERHVWLGWTEA PLVSSDLRARPESLIVAGPQTSVSVGGLLRVFGWYDNEWGFSCRMLDMARLIGRRG" gene complement(1322693..1324198) /locus_tag="RTM1035_06468" CDS complement(1322693..1324198) /locus_tag="RTM1035_06468" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06468" /translation="MRFSSLAILASTVLLLGTVDLSAQSLRGSSEPAEFPPSSFQGRQ YVDSAGCVFVRAGVAGNVTWVPRMTRGRDHLCGFQPSLAPSVQAAAPAPAQSVAQAAP RTQPAAPAPRAATAPAPAPRTATAPAPAPRVATAPAPAPRVATAPAPAPRVVRQPAPV AAVQPQRRTASAQAPLSALRPEADPRPLALRPVTARAAAPATAPKTTPIAKTSGKAVR LTQPDPAQSACANLTAVSAAYTVQHNGSPVRCGPQRSPHVSYASGSNTGRTLAPRPGT PATPETVPAYTRVAPARVYASQKTSLAGISVPPGMQPVWEDDRLNPYRAHQTFEGREQ MLVMWTNTVPQRLIDRRTGADVIHQFPGLQPPYTSFEAQRAAGVTVATQGRHVPAPMT TRQLAQLRTESAQTAPRTTVSTRSAPATTAQTAPSHRYAQAGFFADAAQAQAAAQRIA AAGLPARRGTVTRDGRALTLVLAGPFATQSQLDAGADRLRAMGFANVSLRK" gene complement(1324264..1324896) /locus_tag="RTM1035_06473" CDS complement(1324264..1324896) /locus_tag="RTM1035_06473" /note="COG0035 Uracil phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="uracil phosphoribosyltransferase" /protein_id="jcventer:1101493006648_RTM1035_06473" /db_xref="CDD:30384" /translation="MFPNLTIVDHPLVQHKLTLMRQKETSTAVFRQLLREISQLLAYE VTRELPMTTRAIDTPLMEMDAPVLAGRKLALISILRAGNGLLDGMLELIPSARVGFVG LYRDEATLQPVKYYFKVPEQLGERLSIVVDPMLATGNSSAAAVSMLKDAGARDIRFLC LLAAPEGVARMQEAHPDVPVVTAALDKRLNDKGYILPGLGDAGDRMFGTK" gene 1324895..1325053 /locus_tag="RTM1035_06478" CDS 1324895..1325053 /locus_tag="RTM1035_06478" /EC_number="1.1.1.40" /codon_start=1 /transl_table=11 /product="malic enzyme" /protein_id="jcventer:1101493006648_RTM1035_06478" /translation="MTGLLRCGVIRHSRKRRQGQRCDAGMQSALRGAARRCKLGLEKS RGHGMSMP" gene 1325100..1327379 /locus_tag="RTM1035_06483" CDS 1325100..1327379 /locus_tag="RTM1035_06483" /note="COG0281 Malic enzyme" /codon_start=1 /transl_table=11 /product="phosphate acetyltransferase" /protein_id="jcventer:1101493006648_RTM1035_06483" /db_xref="CDD:30629" /translation="MTDSQKEATRQAALDYHAQPRPGKLEIRATKPMANGRDLSRAYS PGVAEACLEIKADPANASKYTTRGNLVAVVTNGSAVLGLGNIGALASKPVMEGKAVLF KKFANIDCFDIEVNESDPEKLAAIVCALEPTFGAINLEDIKAPDCFIVERICRERMNI PVFHDDQHGTAIVVGAAATNALHVAGKTFEEIKVVSTGGGAAGIACLNMLVKLGVKRE NIWLCDIHGLVHMGREADMNPEKAAFAQATDLRSLDDVIAGADLFLGLSGANIMTPEM VKKMGKRPIVFALANPNPEIMPDLAREAVPDAIIATGRSDFPNQVNNVLCFPFIFRGA LDVGATEINDAMQVACVQGIAELARASTSAEAAAAYHGEQMTFGADYLIPKPFDPRLS GVVSTAVARAAMESGVATRPMADLEAYKAGLDASKFKSALLMRPVFQAASTASRRIVF AEGEDERVLRAAQAILEETTEQPILIGRPEVIARRCERAGLSIRPERDFNIVNPQDDP RYRDYWETYHGVMARKGVTPDLARAIMRTNTTAIGAVMVYRNEADSLICGTFGEFRWH MKYVTNVLEDVSRRPHGALSMMILEDGPLFIADTHVRVTPNAAQLAETAIGAARHVRR FGIAPKVAFCSQSQFGNQPDEGAERLRQAIALLDQAPRDFTYEGEMTIDAALDPDLRE RLLPGNRMQGAANVLVFAYADAASGVRNILKMKAGGLEVGPILMGMGNRAHIVTPSIT ARGLLNMAAIAGTPVAHYG" gene 1327594..1329483 /locus_tag="RTM1035_06488" CDS 1327594..1329483 /locus_tag="RTM1035_06488" /note="COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases" /codon_start=1 /transl_table=11 /product="propionate--CoA ligase" /protein_id="jcventer:1101493006648_RTM1035_06488" /db_xref="CDD:30714" /translation="MGYTEVYERSLADPEGFWMEAAEAIDWVKKPSKALFEANAPLYE WYKDAEVNTCWNAVDRHVAAGRGAQTAIIHDSPVTGIKQKINYSQLRSRVARLAGALR ARGVEKGDRVIIYMPMVPEALEAMLACARLGAVHSVVFGGFAAHELAVRIDDCQPKAI IAASCGIEPGRVVHYKPLLDGAIEQSSHKPEFCVIFQREEEVAKLIEGRDYDWHAFQY GVEPADCVPVSGDHPAYILYTSGTTGAPKGVIRATAGHLVALNWSMKNIYNVNPGEAF WAASDVGWVVGHSYICYGPLIHGNTTIVFEGKPVGTPDAGTFWRVMSEHKVRSFFTAP TALRAIKRDDPKGELIKNYDMSHLRALYLAGERADPDTIEWAQRVMQVPVYDHWWQTE TGWAIAGNPAGCEALPVKIGSPTVAMPGYDVRILDEGGHEVAPGTLGAIAVKLPLPPG TLPTLWNAEERFRKSYLNTFPGYYETGDAGMKDEDGYLWIMARTDDVINVAGHRLSTG AMEEVLASHPDVAECAVIGAADELKGQTPVGFLCLTKGVDRAHEEIVKECVKLVRDQI GPVAAFKLAVVVDRLPKTRSGKILRAIMVKIADSQSYKMPATIDDPAILDEIKSALQS LGLAK" gene 1329788..1330462 /locus_tag="RTM1035_06493" CDS 1329788..1330462 /locus_tag="RTM1035_06493" /note="COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /codon_start=1 /transl_table=11 /product="transcriptional regulator, Crp/Fnr family protein" /protein_id="jcventer:1101493006648_RTM1035_06493" /db_xref="CDD:31008" /translation="MSIRATPQCDAPGLVGILERHGRAVDYPKGQMIYAAGAHDSTMM LILKGRGEISRSSVDGRRSILTHLGPGDMLGELAALDGGARSADAVAATAVRGRILEG ALVLQRLREEPDAALDVIGMLCQRLRQTSGMYTAHVLADGQARLARLLLHLSEKWGET LPGGKLRLAERFSQSDLGDLVGLSRESVNRQIRDWEQAGLIERQGMGIVLCDPAALAR TAERAE" gene 1330459..1331001 /locus_tag="RTM1035_06498" CDS 1330459..1331001 /locus_tag="RTM1035_06498" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06498" /translation="MRHILALLIGLLAAPAVAQEGGMLEYIPPPAENWRYVSDQVMGG VSEGQARIAGPEGARYLHLSGTVSTANRGGFIQIRGDLMTPLPEGAQGVVVRVKGNGE GYFIHLRTRGTMLPWQYYQAPIPSGAAWQELRVPFTAFRASGAMLRDVPRAGDIKSLA AVAYGRDHQANLSFQWLGVY" gene complement(1331058..1331819) /gene="ppnK" /locus_tag="RTM1035_06503" CDS complement(1331058..1331819) /gene="ppnK" /locus_tag="RTM1035_06503" /EC_number="2.7.1.23" /note="COG0061 Predicted sugar kinase" /codon_start=1 /transl_table=11 /product="inorganic polyphosphate/ATP-NAD kinase" /protein_id="jcventer:1101493006648_RTM1035_06503" /db_xref="CDD:30410" /translation="MPRKIAFVASDAPIAQTARATLASRFGHAPEDEADVIVALGGDG FMLHTLHRTQALDIPVYGMNRGTVGFLMNEYSETDLIERLVAAAEEVINPLAMRAESL DGTLHEALAINEVSLLRAGPQAAKLRITIDGRLRLEELVCDGALVATPAGSTAYNYSA HGPILPIGSDVLALTAVAAFRPRRWRGALLPKTAVVRFDVVDPEKRPVMADADSRWVE NVLWVEIRSENRIKHRILFDPGHGLEERLLREQFT" gene 1331990..1333297 /locus_tag="RTM1035_06508" CDS 1331990..1333297 /locus_tag="RTM1035_06508" /note="COG0112 Glycine/serine hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /protein_id="jcventer:1101493006648_RTM1035_06508" /db_xref="CDD:30461" /translation="MPHDGHQPVADQGFFTESLASRDPDLFGAIRSELGRQRDEIELI ASENIVSAAVMEAQGSVMTNKYAEGYPGKRYYGGCQYVDIAENLAIERACALFGCSFA NVQPNSGSQANQGVFTALLQPGDTILGMSLDAGGHLTHGAAPNQSGKWFNAIQYGVRR EDNLIDYDQVQALATEHQPKLIIAGGSAIPRQINFARMREIADSVGAYLLVDMAHFAG LVAAKEHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETLAKKFNSAIFPGIQGGPLM HVIAAKAVAFGEALRPEFKSYIQQVIRNAQALSDQLIKGGLDTVTHGTDTHVLLVDLR PKGVKGNDTEKALGRAHITCNKNGVPFDPEKPTVTSGIRLGSPAGTTRGFGEAEFRQI ADWIIEVVDGLAANGADGNGAVEAKVKAEVEALCKRFPLYPNL" gene complement(1333378..1333752) /locus_tag="RTM1035_06513" CDS complement(1333378..1333752) /locus_tag="RTM1035_06513" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06513" /translation="MIDTEEFNTKTTRLQQALTDRMRLRGPTLERQLRRAGRRLPRRQ RRAGAIVLGAQDWMAHAKLARVLDIGQVDRAFSDLHAYLDTLDPQEARKTAVLRLVGG IVLNLMLLAGLIYALIRWQSPL" gene 1333842..1334597 /locus_tag="RTM1035_06518" CDS 1333842..1334597 /locus_tag="RTM1035_06518" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase fold protein" /protein_id="jcventer:1101493006648_RTM1035_06518" /db_xref="CDD:40647" /translation="MLNRIEHGAPTERPGLVIVHGLYGSARNWGVIAKRLSDTRHVIA VDMRNHGASPWFETHSYEDMAGDLAEVIEGLDGPYDVLGHSMGGKAAMVLALTQPALV NRLIVADIAPVSYGHSQVQYIKAMQAVDLATVERRSDAAAQLQATVDNPALVPFFLQA LDVAEKRWLLNLETLAREMPKILSFPDISGPYEGKVMFLTGADSAYVAREHRDRIKAL FPAAQFAKIPGAGHWLHAEKPREFEAAVRTWLG" gene complement(1334611..1334796) /locus_tag="RTM1035_06523" CDS complement(1334611..1334796) /locus_tag="RTM1035_06523" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06523" /translation="MLRLGLILHLFIGSTLSGSAVIAALVMGQDTLKPILIAALLGFI AAFPVSYIVAKKLYELR" gene complement(1334951..1335730) /locus_tag="RTM1035_06528" CDS complement(1334951..1335730) /locus_tag="RTM1035_06528" /note="COG0670 Integral membrane protein, interacts with FtsH" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06528" /db_xref="CDD:31014" /translation="MAELNTIRTATGTRTAQIDAGLRAHMNKVYGTMSVGMLITALAA WAIAGLAVTTDPSAAAAQLPNGKMLTGLGAALYLSPLKWVVMLAPLAFIFLGWGALVR RASAAAVQLGFFAFAALIGISMSSIFLMFTSFSIVQTFIVTAIAFAGLSLFGYTTKKD ISGWGSFLIMGVIGLVVAMVINIFLQSPAMMFAISAIGLLIFAGLTAFHTQEIKNTYV AHAAHGDQEWLDKSAYDGALSLYISFLNMFQFLLMFMGQQE" gene complement(1335950..1336195) /locus_tag="RTM1035_06533" CDS complement(1335950..1336195) /locus_tag="RTM1035_06533" /note="COG5457 Uncharacterized conserved small protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06533" /db_xref="CDD:35016" /translation="MKTPSHITKGKGKTMTVHAQTSVLRSALRAPRLAEMLAVWTQRR ALYRLDDAALEDLGLTREAALREASRPFWDLPRRLHC" gene 1336277..1337149 /locus_tag="RTM1035_06538" CDS 1336277..1337149 /locus_tag="RTM1035_06538" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006648_RTM1035_06538" /db_xref="CDD:30928" /translation="MRNLDITTLRSLVAVADHGGVTRAATALNLTQSAVSMQIKRLEE MLDLTLLERANRRVSLTAPGEQLVGYARRMLDLNDEVMGRLTEETFEGELALGVPHDI VYPVVPRVLKQFNAAFPRVKVNLRSSSTLRLREALARGEVDVILTTEEGVGEGGETLT QMNLRWTGAQGGVSWKRRPLRLAFCRQCIFRPIVLRKLDAAGVDWELAVDSEDDRAVE ALVSADLAVGALLESSIPPHLEAIHPGGALPDLGIQKINLYGNAGRDAVRAELMRMLR QGFGALTSPVLMSA" gene complement(1337136..1338098) /locus_tag="RTM1035_06543" CDS complement(1337136..1338098) /locus_tag="RTM1035_06543" /note="COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="Zinc-binding dehydrogenase" /protein_id="jcventer:1101493006648_RTM1035_06543" /db_xref="CDD:30949" /translation="MRAYHLPAKGAEPLLTDLPRPTPGPGEIRVRIAACGLNFADLLM IKGAYQDTPEPPFTLGMEVAGTVDALGPGTDGPAPGTRIAVFGGQGGLADYGCFPAAR AVPLPDAMSFADAAAFQVAYGTSHVALDHKARLQPGETLLVLGAAGGVGLTAVEIGKQ MGARVIACARGADKLAVAQEAGADHLIDAATQDIRDVCRALGGVDVVYDPVGGDQFTA ALRACNPEARILTIGFASGDVPQIPANHLLVKNITVMGLYWGGYLKFRPEVVTQSMAT LFDWYAAGRLRPHVSHLLPLEQAAEALDLLRLRKSTGKVVVTLT" gene 1338411..1338785 /locus_tag="RTM1035_06548" CDS 1338411..1338785 /locus_tag="RTM1035_06548" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /protein_id="jcventer:1101493006648_RTM1035_06548" /db_xref="CDD:28977" /translation="MPHPVDVHVGKRIRHRRWLVGMTQQQLAESVGIKFQQIQKYETG ANRVSASRLWDIAESLDVEISFFFEGLDQEGGVEREKSDPARADLMGDKEALDLVRSY YAIPENQRRRLFDLARVLSEVA" gene 1338842..1339633 /locus_tag="RTM1035_06553" CDS 1338842..1339633 /locus_tag="RTM1035_06553" /note="COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family" /codon_start=1 /transl_table=11 /product="Histidinol-phosphate phosphatase, putative, inositol monophosphatase" /protein_id="jcventer:1101493006648_RTM1035_06553" /db_xref="CDD:30139" /translation="MDKTDIVKTAHAVADAAREAVLPFFRSAGLTADNKLPEGRFDPV TEGDRATERAMREVLRRLRPQDGILGEEYGAVSGTSGLTWVLDPIDGTRAFMSGAPTW GVLIAVSDETGPIYGIIDQPYIGERFEGGWGTARMTGPMGARDLRVLGARALSDAIVF TTFPELGSPAEAAGFAEVAACAKLTRYGLDCYAYSLVAAGHVDLVIEAGLAAYDIQAP IAVIEAAGGIVTDWQGGPAHQGGRAIAAAGRAQHEAALEILSKVV" gene complement(1339732..1341021) /locus_tag="RTM1035_06558" CDS complement(1339732..1341021) /locus_tag="RTM1035_06558" /note="COG0402 Cytosine deaminase and related metal-dependent hydrolases" /codon_start=1 /transl_table=11 /product="guanine deaminase" /protein_id="jcventer:1101493006648_RTM1035_06558" /db_xref="CDD:30046" /translation="MSSLTLITGQVLAFDRSPFDGDPAGASTLHEALLIENGRIAAVG TAQELRAQAPQARVTDMGKHLISAGFVDAHVHYPQTAIIASWGKRLIDWLNTYTFPEE MRFADPAYAADIAGRYLDLMLAHGTTTCASYATIHPASVTAFFEAAQARGLRAVAGKT CMDRNAPEGLRDTAQSAYDDSKALLERWHGVDRLSYAITPRFSPTSTPDQLAALGALW SEYPECLMQTHLSEQVDEVAWVKSLYPEARDYLDTYESHGLLGARGLYGHAIHLETRE RDRLREMGAALIHCPTSNSFIGSGLFNLAARVAEGQRVGLATDTGGGSSFSMLRTMAA AYEIGQLTGTALHPAQLLWLATAGSAEALHMGAHIGTIAPGMEADLVALDLASTPAIA QRSARATDIWEALFPTIMMGDDRAIAGVWVAGKAVRI" gene 1341157..1342548 /locus_tag="RTM1035_06563" CDS 1341157..1342548 /locus_tag="RTM1035_06563" /note="COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)" /codon_start=1 /transl_table=11 /product="magnesium transporter" /protein_id="jcventer:1101493006648_RTM1035_06563" /db_xref="CDD:32420" /translation="MAEHEDDLAPEAEQDEDDTPLTRSLIARIMYAVETQDREMLWAE MEPLHAADIADLLEQSNAYDRRRLIALYGQEFDGDILSELDESIREEVINLLTPQVLA DAVRELDSDDVVDLVEDLEDQQQEAILSVLEDSDRAAVEQSLTYPEYSAGRLMQREVV MAPEHWTVGDAIDFMRHAKELPEQFYHIVLVDPRLHPVGNVTLGRIMASRRDVPLKDI VEETFHTIPVTRYDGDVAYMFNQYHLISAPVVDEDGRLVGVITIDDAMAVLDEEHEED IMRLAGVGEGGINDSVIETSKQRVPWLAVNLGTAILASLVIAQFELAIAQLVALAVLM PIVASMGGNAGTQSLTVAVRALATKDLTGANVWRVLRRETLVGLINGLIFALVMGAVG VVWFGGPELGYVIGAAMVINLVVAGLAGAAIPVIMDRMGVDPALGSGTFVTTVTDVVG FFAFLGLATVFLI" gene 1342545..1343126 /locus_tag="RTM1035_06568" CDS 1342545..1343126 /locus_tag="RTM1035_06568" /note="COG0212 5-formyltetrahydrofolate cyclo-ligase" /codon_start=1 /transl_table=11 /product="5-formyltetrahydrofolate cyclo-ligase" /protein_id="jcventer:1101493006648_RTM1035_06568" /db_xref="CDD:41837" /translation="MTDLTEVKAAARKTAFERRAEAHRARMPGTAALLSGVLAGYRGV PLAGYMPIRSEIDPLTAMEEAAAHGPVGVPVIRGAGLPLDFSRWGPGCALREGPFGAM VPEVDDFFEPEILIVPLVAFDRRGGRLGYGGGFYDRTLEMLRARRGTLAIGFAYGAQE AAELPLEPTDQPLDMVVTEVEVISFGTRGQSGR" gene complement(1343111..1344283) /locus_tag="RTM1035_06573" CDS complement(1343111..1344283) /locus_tag="RTM1035_06573" /note="COG0303 Molybdopterin biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein A" /protein_id="jcventer:1101493006648_RTM1035_06573" /db_xref="CDD:30651" /translation="MITVDAALAHLFSLVQPLDIEEVPLAQAAGRILARDVAARRDQP PFAASAMDGYAVCSADAAPGTTLTVIGEAAAGHAYPGALSTGQAVRIFTGAPIPTGAT RVIIQEDVTRDADQITLGQNLDRKDHIRPLGCDFREGQTITAPRRLRPADIALLASMN IAAVPVRRKPQVALMSTGDELVMPGEAPGPDQIIASNTFGLKAMLDAMGAEARILPIA RDTVASLTACFALTRGADLIITIGGASVGDHDLVGRVAGDLGMDRAFYKVAMRPGKPL MAGRLNGAAMVGLPGNPVSAMVCGHVFIAPMINAMLGLGTAPTPRLRAPLAIALPANG PREHYMRAALTPEGIHPEDKQDSSLLTILANAQALMVRPVSDPARAAGEMMDYLPL" gene complement(1344280..1344756) /locus_tag="RTM1035_06578" CDS complement(1344280..1344756) /locus_tag="RTM1035_06578" /note="COG0315 Molybdenum cofactor biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein C" /protein_id="jcventer:1101493006648_RTM1035_06578" /db_xref="CDD:29626" /translation="MSGLSHFDGQGHAHMVDVSDKDVTARVAVAESHIKMARETFDII AEGRAKKGDVLAVARLAGIMAAKRTPDLIPLCHPLAITKVTVDLTLDPDLPGVRIAAT VKTTGQTGVEMEALTAASVTALTVYDMTKAVDKAMEIGGLRVILKDGGKSGRYEAI" gene complement(1344756..1345571) /locus_tag="RTM1035_06583" CDS complement(1344756..1345571) /locus_tag="RTM1035_06583" /note="COG0134 Indole-3-glycerol phosphate synthase" /codon_start=1 /transl_table=11 /product="indole-3-glycerol phosphate synthase" /protein_id="jcventer:1101493006648_RTM1035_06583" /db_xref="CDD:40317" /translation="MTTPTILDKIKAYKLEEIAAAKAAHPLAEIETLAHEAPHVRPFA DALLKATKTGYGLIAEIKKASPSKGLIRADFDPAALAQAYATGGATCLSVLTDTPSFQ GAPDYLEQARNACDLPVLRKDFMYDPYQVAEARAWGADCILIIMASVSDAQALELEEA ATHWGMDALIEVHNRAELDRANHLKSRMIGINNRDLNTFETTLDTTRQLSKFVPPERM IVCESGLATPEDLADMARYGARTFLIGETLMRAEDVAQATRNLLANPLTPGGF" gene complement(1345568..1346590) /locus_tag="RTM1035_06588" CDS complement(1345568..1346590) /locus_tag="RTM1035_06588" /note="COG0547 Anthranilate phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="anthranilate phosphoribosyltransferase" /protein_id="jcventer:1101493006648_RTM1035_06588" /db_xref="CDD:30893" /translation="MSEQLKPLIAAAVDRPLSRTEAETAFEILFEGEATPAQIGGFLM ALRTRGETVNEYAAAAAVMRAKCNAVRAPEGAMDIVGTGGDGKGTLNISTATAFVVAG AGVPVAKHGNRNLSSKSGAADALTEMGIKVMVGVPVVERALTEVGIAFMMAPMHHPAM AHVGPVRTELGTRTIFNILGPLTNPAGVKRQLTGAFSRDLIRPMAETLGQLGSTRAWL VHGSDGTDEMTITGVSWVAALEDDGSIHETELHPEDFGLPVHPFEAILGGTPAENAAA LRALLDGAPGAYRDAVLLNAAAALTVAGHASDLRAGVAQAAESIDSGAARAKIAALAK LTSETA" gene complement(1346587..1347168) /locus_tag="RTM1035_06593" CDS complement(1346587..1347168) /locus_tag="RTM1035_06593" /note="COG0512 Anthranilate/para-aminobenzoate synthases component II" /codon_start=1 /transl_table=11 /product="anthranilate synthase component II" /protein_id="jcventer:1101493006648_RTM1035_06593" /db_xref="CDD:30858" /translation="MLLLIDNYDSFTYNLVHYVGELGAETRVVRNDALNVQEAMAMRP DGILLSPGPCDPDQAGICLPLTLAAAEAGIPLLGVCLGHQTIGQAFGGKVIRHSEIVH GKMGQILHEGKGVFAGLPSPFEATRYHSLVVERSSLPDCLEITAELADGTIMGLQHRD LPIQGVQFHPESIASQHGHALLKNFIDMMQVPA" gene 1347328..1348761 /locus_tag="RTM1035_06598" CDS 1347328..1348761 /locus_tag="RTM1035_06598" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06598" /db_xref="CDD:44655" /translation="MMTGTLVSGLALGTLSVLSGAPGTVPPEAVSLEVPAGSGFDLRR EDAEAALPETQAAPETAGVSQAAPPAPDDSAGIGAVETAPAAVPETGEAAALAEAPEV AADSGGVAVESDEPVLPSPLVPAPVVPNSEGAVAVSTDPAQPPAPPPSEESAGLSAPE AGQSESIFPSEEPAPVLIPDATDGEGVADLSPEAEAQAEVAPVPEADAETVAKTLPAL GTIGNRAEGVTTNRLPSLGDPAPEVAEAIAEPEAAEGALVRNRVAFDNPEGKPLMAII LMDDGQSPIGIEALQSFPYPLNFAVDVTWSGAADAAERYRAAGFEVLAMADLPEGARP EDAEVAMQAWFTQVPQAVAVLEGAGAGLQSSREATAQLAPILKESGHGLVMHPNGLNT AQKLIAREGVPSASLFRDFDGQGQNVAAIRRFLDQAAMRADQQEDGVIMLGRLRADTI SALLLWGLADRAASVALAPVSAVLRAE" gene 1348850..1349347 /locus_tag="RTM1035_06603" CDS 1348850..1349347 /locus_tag="RTM1035_06603" /note="COG1881 Phospholipid-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06603" /translation="MSKRLILALGLSLMGSAAFADMTVQLGGGWDGRKVPAGQHCHLS GGKGSTPPMTVSGIPAGTVWLIAYYNDKSYGPLSQNGGHGTIGYPVKGATADLPAVPG MTAKLPGGVRVIKPARSTGDYASPGYLPPCSGGRGNRYTVDIRAVDAAGKVLSELKNV DIGKY" gene 1349467..1350210 /locus_tag="RTM1035_06608" CDS 1349467..1350210 /locus_tag="RTM1035_06608" /note="COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase" /codon_start=1 /transl_table=11 /product="histidine biosynthesis" /protein_id="jcventer:1101493006648_RTM1035_06608" /db_xref="CDD:30455" /translation="MILYPTLEILDGKCVTLTRGRLDEPVFWHVDPIETARRFVAAGA DWMHLTDMNGLRGAGDNDALIEQIIRAVGIPVQLGGGFRGREAVERWIDKGAGRIVLG TMAVQNPEAVKALAKYHPDQIVVAVDIYQGQLMTDGWRTASAFGPGELIAAFDGVPLA GILITDIDADIEDSDGSLGVISGLAAKTRHAVIARGTVRTVDDVARLRYIPNIDGTII GRALLSKDVDLGEALAVARAAPEAKAEFI" gene complement(1350221..1350763) /locus_tag="RTM1035_06613" CDS complement(1350221..1350763) /locus_tag="RTM1035_06613" /note="COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases" /codon_start=1 /transl_table=11 /product="RNA pseudouridylate synthase" /protein_id="jcventer:1101493006648_RTM1035_06613" /db_xref="CDD:30017" /translation="MARLILFNKPYDVLSQFTDRGSEGSPRATLSDFIDIPRVYPAGR LDRDSEGLLLLTDDGQLQARIANPRFKTEKTYYAQVEGLPDDTALAALRAGVTLSDGP TRPARVERTEPPTLWPRTPPVRFRKSVPDCWLKLTISEGRNRQVRRMTAHIGHPTLRL IRWRIGDWTLDGLGPGEWRG" gene complement(1350802..1351419) /locus_tag="RTM1035_06618" CDS complement(1350802..1351419) /locus_tag="RTM1035_06618" /note="COG0607 Rhodanese-related sulfurtransferase" /codon_start=1 /transl_table=11 /product="Rhodanese-like protein" /protein_id="jcventer:1101493006648_RTM1035_06618" /db_xref="CDD:29085" /translation="MNRITRFAAPALVALALALAPLASAAGGALTLQEPVAVDTLSKN KQTAPGLYMIAADAARVLADHPNVALIDVRTPSEVTLIGYATAAAANIPSKLMDPALT FDAKKGAYKMVDNPAFVDEVKAWLASDAAAGVDTLLVMCRSGSRSAEAIGKLVDGGIA VTLYNVVDGFEGDTNEAGARAVNGWRNAGLPWTYKIRQGLRPGYN" gene complement(1351513..1353024) /locus_tag="RTM1035_06623" CDS complement(1351513..1353024) /locus_tag="RTM1035_06623" /note="COG0147 Anthranilate/para-aminobenzoate synthases component I" /codon_start=1 /transl_table=11 /product="anthranilate synthase component I" /protein_id="jcventer:1101493006648_RTM1035_06623" /db_xref="CDD:30496" /translation="MELTPSFEEFARAYEAGENQVVHARLAADLDTPVSLMLKLTGAA RDAFLLESVTGGELRGRYSIIGMKPDVIWHCHGTTSRINRQARFDHDAFEDQHGDPLA NLRGLIAESRIALPEGMPAASAGLFGYLGYDMIRLVEHLPNVNPDPLGLPDAVMLRPS VIAVLDGVKGEVMVVAPAWVSSGQSARAAYAQAAERVMDAVRDLERALPQSSRRLGEA HEDAAPVSNFTRDGYKQAVEKAKDYIRAGDIFQVVPSQRWTQTFRQPPFSLYRSLRRT NPSPFMFYFNFGGFQVIGASPEILVRVFGQEVTIRPIAGTRPRGATPEEDRALEADLL ADKKELAEHLMLLDLGRNDAGRVCKIGTVHPTEKFIIERYSHVMHIVSNVVGELAEDQ DALSALLAGLPAGTVSGAPKVRAMEIIDELEPEKRGVYGGGVGYFSSGGDMDVCIALR TAVVKDQNLYIQAGGGVVYDSDPEAEYMETVHKSNAIRRAAADAARFGGDSNG" gene complement(1353037..1354881) /locus_tag="RTM1035_06628" CDS complement(1353037..1354881) /locus_tag="RTM1035_06628" /note="COG0760 Parvulin-like peptidyl-prolyl isomerase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06628" /translation="MAGNSISKGAMWVLMGLLIVGLAGFGATNLSGNVRSIGHVGTAE IDVTTYARALQNEIRALEAERGSAMSFAEARAAGVDTDVLGRLVARAALEHEADRLGL SIGDENLREQILDIPSFQGLDGSFDREAYRFALDQAGLNESQFEENIRAETASTLVQA AALAGLQTPSTYMDTMMTYLAERRSLAFAVLDRAALQSGLPVPSEDDLKTYHQGHLPD FTTPETKTITFAWVTPAMILDSVEVDEAALREAYAERETEFNMPERRLVERLVFADSA AATRARTRIDDGIALEMLVSERGLDMADIDMGDVSREDLGAAADPVFSAQAGEVVGPI DTNLGPALFRVNAVLAAQITTFEEAEPRLREELAADRARRVIEAKIDTVDDLLAGGAT LEDVAKETDLELGSIDWHPGLTEGMAGYDSFRAAAQAVATGDYPEVEQLADGGIFALR LDGIVEPRIQPLEDVRDAVLRGWRAEATVTALRAQLEPQLAELRAGASFADLGLTATE VTDMTRRDYRPEAPAEFIDTVFDMVQGEVRVIEGNGRLFVLRLDSIAPPLPAEEDEDL ARLRAALQDQAAADLGQDLFQVLANDIRSRAGVELDQAALNAVHANFN" gene complement(1354929..1356161) /locus_tag="RTM1035_06633" CDS complement(1354929..1356161) /locus_tag="RTM1035_06633" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06633" /db_xref="CDD:30785" /translation="MSNPTGGPDMINPPRTACTFSPPVMEARRWLDGVTFPPHRPLIN VSQAAPVAPPPEALRRAVAEAALNEPQAHLYGPVLGLPDLRAEVAAQWSATYGGSIAP AEVAITSGCNQAFCAAITTLCAEGDEVILPTPWYFNHKMWLDMAGVRAVPLAAGAELL PDPDHAAALITPRTRAIVLVTPNNPGGVEYPADLTHAFYTLAKERGLALIVDETYRDF DARPGAGHDLFHDTDWADTLIQLYSFSKAYRLTGHRVGAMVASPTRLAEVEKFLDTVT ICPNQLGQIAALWGMRNLGQWLAGERAEILDRRAAIHDNMPKVTGQGWRLLGCGAYFA YMAHPFAMDSHHLAQALVPEAGVLLLPGTMFRPSDDPEGARELRVAFANLDRAGIDTL FDRLAALRWPLVQTGHSA" gene complement(1356136..1356633) /locus_tag="RTM1035_06638" CDS complement(1356136..1356633) /locus_tag="RTM1035_06638" /EC_number="2.4.2.22" /note="COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins" /codon_start=1 /transl_table=11 /product="xanthine phosphoribosyltransferase" /protein_id="jcventer:1101493006648_RTM1035_06638" /db_xref="CDD:32417" /translation="MMDRLPHEKGFHVSWDQLHRDARALAWRLQSEAPEGGWRAVVAI TRGGMAPAMIVARELDIRTVDTISVKSYNHQAQTAPVVIKSPDMSIIGDGAAVLIVDD LVDTGRTLEVVRQHMPRAHVATVYAKPMGRAQVNTFVTEVSQDTWIFFPWDMALQYVE PYRGA" gene complement(1356638..1357243) /locus_tag="RTM1035_06643" CDS complement(1356638..1357243) /locus_tag="RTM1035_06643" /note="COG1280 Putative threonine efflux protein" /codon_start=1 /transl_table=11 /product="probable amino acid efflux protein, LysE family" /protein_id="jcventer:1101493006648_RTM1035_06643" /db_xref="CDD:31471" /translation="MTALDLLAFNAVLAAAILSPGPALLFALRTALADGRAAGIAAGM GLGLVAALWTLAALLGLDALFTLFPWAYVTLKIVGAAYLIYIAWTTWRAARQPVTEGP RKPRGRAFLDGVLINLGNPKSVLFAASVLVVIFPKGLTASEIALITVNHMLVEWLFYA GFATLLSGAAARRAYLGAKPIIDRAAALLLGALGLKLLLSR" gene complement(1357255..1358061) /locus_tag="RTM1035_06648" CDS complement(1357255..1358061) /locus_tag="RTM1035_06648" /EC_number="1.3.1.10" /note="COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)" /codon_start=1 /transl_table=11 /product="enoyl-(acyl carrier protein) reductase" /protein_id="jcventer:1101493006648_RTM1035_06648" /db_xref="CDD:30968" /translation="MSNNLMAGKRGLIMGLANDKSIAWGIARACANAGAELAFSYQGD ALKKRVDPLAAELGSTIVLPCDVGNMTSVDQLFVDLGTHWDSLDFVVHAIGFSDKNEL RGRYVDTSRDNFLMTMDISVYSFTAVMQRAEKMMGEGGSALTLTYYGAEQVMPHYNVM GVAKAALEASVKYMAEDLGKDGIRVNAISAGPIKTLAASGIGDFRYILKWNELNSPLR RNVTIDDVGRSALYLLSDLGSGVTGETLHVDAGYHIVGMKAVDAPDIDAT" gene 1358227..1358829 /locus_tag="RTM1035_06653" CDS 1358227..1358829 /locus_tag="RTM1035_06653" /note="COG0259 Pyridoxamine-phosphate oxidase" /codon_start=1 /transl_table=11 /product="pyridoxamine 5''-phosphate oxidase, putative" /protein_id="jcventer:1101493006648_RTM1035_06653" /db_xref="CDD:30608" /translation="MERDGHFAGDDPFEIARGWLAEAEKSEPNDPNAVALSTVDADGL PNVRMVLLKEISDDGFVFYTNYNSAKGQELAANPKAAMVLHWKSLRRQVRIRGMVSRE EGEGADAYYASRSLKSRLGAWASEQSQPLDSRTTLMAKVAKITAQKGPNPPRPPFWGG FKITPVEIEFWADGAFRLHDRFVWRRSDIGESWKIQRLNP" gene 1358951..1359484 /locus_tag="RTM1035_06658" CDS 1358951..1359484 /locus_tag="RTM1035_06658" /note="COG1278 Cold shock proteins" /codon_start=1 /transl_table=11 /product="cold shock DNA-binding domain protein" /protein_id="jcventer:1101493006648_RTM1035_06658" /db_xref="CDD:40409" /translation="MTTQDDDIRRIKGRVKWFDPVKGFGFVIADEGGPDILLHPNVLR NFGQSSVADRAGVELDVQQTERGRQAVAVHTISPPDDLEHTGLADLDEIDPEIIRNAP LQPARVKWFDKGKGFGFANTFGRDEDVFVHIEVLRRSGLADVQPGEALAIRVIDGKRG RMATEVCGWETAVKLSE" gene 1359481..1359948 /locus_tag="RTM1035_06663" CDS 1359481..1359948 /locus_tag="RTM1035_06663" /note="COG1430 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06663" /db_xref="CDD:31619" /translation="MIAAVVLAGVASTAAAETCREDVVMLRSDAGSARFSVEVADDKA ERAQGLMNRESMAMSAGMLFVYPEPQAVGFWMKNTLIPLDMIFMDETGTVKKVHHEAQ PLDESPIFGGQDILAVLEINGGLARKIGISEGWTMRHAAIDQSKAAWPCSESQ" gene 1360013..1360086 /locus_tag="RTM1035_t07496" tRNA 1360013..1360086 /locus_tag="RTM1035_t07496" /product="tRNA-Pro" gene 1360594..1364274 /locus_tag="RTM1035_06668" CDS 1360594..1364274 /locus_tag="RTM1035_06668" /EC_number="1.17.4.1" /note="COG0209 Ribonucleotide reductase, alpha subunit" /codon_start=1 /transl_table=11 /product="ribonucleotide-diphosphate reductase alpha subunit" /protein_id="jcventer:1101493006648_RTM1035_06668" /db_xref="CDD:29674" /translation="MKIERKFTTAGQDAYAALEFVTTSSEIRNPDGTTVFRLDDIEVP RGWSQVASDVIAQKYFRKAGIPNRIEKVKEEGVPEFLWRSVPAADNDGFGGETSAKQV FDRLAGAWCYWGWKGGYFTKEADARAYFDEMRYMLARQMAAPNSPQWFNTGLHWAYGI DGPSQGHYYVDFQTGELTKSTSAYEHPQPHACFIQSVKDDLVGDGGIMDLWVREARLF KYGSGTGTNFSSLRAEGEKLSGGGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVIC DADHPDIQEFINWKVKEEQKVASIVAGSKMHEQKLNQIFAAIRAWDGSSEDAVDPKKN EQLKAAIRGAKQVQIPETYVKRVLDYARQGYESIEFPTYDTDWDSEAYASVSGQNSNN SIRVTDAFLKAVKDDADWALINRTDGSVAKTIKARDLWEDVGHAAWACADPGIQYHDT VNAWHTCPEDGEIRGSNPCSEYMFLDDTACNLASMNLLKFFGDGKFDADAYMHATRLW TVTLEISVTMAQFPSKEIAQLSYEFRTLGLGYANIGGLLMNMGFGYDSDEGRALCGAL TAIMTGVAYATSAEMAGELGAFAGYKRNSKHMLRVIRNHRNAAYGATEGYEGLAVKPV PLDHKNCPDARLVDLAMASWDEALKLGEKHGYRNAQTSVIAPTGTIGLVMDCDTTGIE PDFALVKFKKLAGGGYFKIINQSVPAALEKLGYGPAQIEEIVSYAVGHGTIGNAPGIN HTSLIGHGFGPNELAKVDAALGSAFDIRFVFNQWTLGAEFCTNVLGIPTEKLNDPTFD ILAHLGYSKRDVELANDHVCGTMTLEGAPYLKADHYHVFDCANPCGKKGKRYLGVESH ITMMAAAQSFISGAISKTINMANDATIEDCQKAYELSWSLGVKANALYRDGSKLSQPL AASLVEDDDEAAEILESGTPQQKAQVLAEKIVEKVIIKEIQKSHREKLPERRKGYTQK AIVGGHKVYLRTGEYEDGKLGEIFIDMHKEGAGFRAMMNNFAIAVSVGLQYGVPLEEF VDAFTFTKFEPAGMVQGNDSIKNATSILDYIFRELAVSYLDRTDLAHVKPSGASFDDL GRGEEEGVRNVSEMSEAAASRSLEVLKQISSTGYLRKRLPQELVVFQGGQTLARASGD GMDPMTMLATLVPETATATVSAAMTTTTAVASGSVSMDARTKARLQGYEGEACGDCGN YTLVRNGTCMKCNTCGATSGCS" gene complement(1364554..1365024) /locus_tag="RTM1035_06673" CDS complement(1364554..1365024) /locus_tag="RTM1035_06673" /note="COG2847 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06673" /db_xref="CDD:32675" /translation="MKQLALALLATLSLCGAAQAHSVKKDAIEIIHPHINEPFAGARS AAAYMAISNEGETAIRLIGIDTAAAKVTSLHTTEHGSDGVARMQPIAGINIPAGETVV LEPGGMHVMLMGLTAPLKEGDMVPATFLFEQMGPVEVEFMVDPTDGVDHSKMGH" gene complement(1365192..1365845) /locus_tag="RTM1035_06678" CDS complement(1365192..1365845) /locus_tag="RTM1035_06678" /EC_number="4.1.2.-" /note="COG0176 Transaldolase" /codon_start=1 /transl_table=11 /product="fructose-6-phosphate aldolase" /protein_id="jcventer:1101493006648_RTM1035_06678" /db_xref="CDD:29949" /translation="MKFFVDTAETDQIAELNDLGMVDGVTTNPSLILKSGRDILEVTK EIAEMVDGPVSAEVVALKADEMIAEGRKLAAIAGNIAVKVPLTWDGLKACKVLSGEGH MVNVTLCFSANQALLAAKAGATFISPFIGRLDDINLDGMELIADIRTIYDNYGFETQI LAASIRTVNHAFQAAHIGADVMTAPPSVIKKMAEHPLTDQGLKTFMADWEKTGQKIL" gene 1365940..1368105 /locus_tag="RTM1035_06683" CDS 1365940..1368105 /locus_tag="RTM1035_06683" /note="COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase" /codon_start=1 /transl_table=11 /product="primosome assembly protein PriA" /protein_id="jcventer:1101493006648_RTM1035_06683" /db_xref="CDD:31391" /translation="MTQASPDFYDEGTLVAVLTAQPLEGPLDYLAPEGGVMAGAFVEV PLGPRRVLGVVWGPGRGGFDLKKARGIGRVLDVAPMRVEMQEFLRRAGEYTLTPLPAM LRLATRAPGLSDPPSMQKIYRLGDTEPARLTDARARVLEVLRDHGGLGFTLKEVSDLA GVTSSVVKALVAQGAVLEEDTPRDTPFVPLDPDLPAKALTEDQAAAAARLRMGLQAGS YGTTLLRGVTGSGKTEVYLEAVAEALRQGGQALVLLPEIALTAEFLTRVEVRFGTRPA EWHSGVTMTERRRVWKMVGQGGAQMVVGARSALFLPFQNLALIVVDEEHDTSYKQEDG ALYHARDMAVLRASLCGARVVLASATPSLESWANAEAGKYERLDLDARFGVAVMPELA AIDMRVETLPSNRWISPTLQAAVNARVAAGEQALLFLNRRGYAPTTVCRACGHQIGCD HCDARMVEHRFQKRLICHQCGESAAMPEACPACGVAGKLAAVGPGVERLAEEAAALFP QARIAVLSSDLFGSARALKEQIVEIAQGAADIIIGTQLVAKGHNFPLLTLVGVIDSDL GLQGSDLRAAERTFQLMRQVAGRAAGQSGRRALCRRFSPSIRSFAPFWPAMKRDFGAP RPRGAGRRGCRPTVAWRGLSSVPPICRRCSIWARRWRGVTGPFGRLGRRSLARHQHPL PVSGGGTGCVCWSRPPRGRRYRRRCPSGLRRCGCLRKCA" gene 1367886..1368137 /locus_tag="RTM1035_06688" CDS 1367886..1368137 /locus_tag="RTM1035_06688" /note="COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase" /codon_start=1 /transl_table=11 /product="primosome assembly protein PriA" /protein_id="jcventer:1101493006648_RTM1035_06688" /db_xref="CDD:31391" /translation="MQAVFDLGEALARRDGPIRAVGAQVFGPAPAPIARIRGRHRVRL LVKAPKGAAIQAAVSEWIAQVRLPAQMRLTVDIDPQSFY" gene 1368269..1369426 /locus_tag="RTM1035_06693" CDS 1368269..1369426 /locus_tag="RTM1035_06693" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06693" /translation="MAAAMPVAFATWSALLNNFVIEVAGFNGSDIGWLHTVREIPGFL AIGVIALIMFMHEQVLALVSLLLLGVATAITAHFPSLGGILAITMLSSIGFHYFETVN QSLQLQWLDKLRAPQMLGWLMAGGSAATLVAYVLIVLTWQAFDLSYNFVYMVSGGFTA VIAVFCLMAYPRFEAPNPQLKKMVLRRRYWLYYALQFMAGARRQIFIVFAGFMMVEKF GFEVHEVTALFLINLVVNMIFAPLMGKAVFHFGERRTLMFEYAGLAIVFLAYGGIYFF GWGVVLAATLYVIDHILFSLALALKTYFQKIADPGDIAPTAAVAFTINHIAAVFLPAA LGYLWLVSPAAVFFGAAGMAGISFGLALLIPRHPEPGNETIFARFLPAPAE" gene 1369453..1370325 /locus_tag="RTM1035_06698" CDS 1369453..1370325 /locus_tag="RTM1035_06698" /note="COG2264 Ribosomal protein L11 methylase" /codon_start=1 /transl_table=11 /product="ribosomal protein L11 methyltransferase, putative" /protein_id="jcventer:1101493006648_RTM1035_06698" /db_xref="CDD:32445" /translation="MPTYTALTTLPGRANAEALAEALEHLEPEPTGVGSFEMEDGSGL WEIGAYFETAPDEVALALLAKMHGAKPFVISELPEVDWVAKVRRDLTPVVAGRFFVYG SHDADKVPQDCEPLLIEAAMAFGTGHHGTTQGCLKALDRLAHTGFVGRSVLDLGCGTA VLAMAAARIWPGVMLASDIDAVAVEVANANVTANALEGRVECIEAEGLEHPRLSAAAP YDLVFANILKGPLILLAPGITAALTPGGKVILSGILNEQADEVRDVYCALGNSLEHRE EIGDWTTLTISKSL" gene 1370419..1370778 /locus_tag="RTM1035_06703" CDS 1370419..1370778 /locus_tag="RTM1035_06703" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06703" /translation="MGCLDMSDAFQGFDSRLKAIGRKRTRLAQGYVSKVGKDGLIIFR PKRRKSGLPLRGLFYLALGFTFFKAVIIAHLGAPLYGDRLAQLAQGSIVEQAGAVVMQ TDPVSELLSTYIRPILR" gene complement(1370856..1371053) /gene="ruvC" /locus_tag="RTM1035_06708" CDS complement(1370856..1371053) /gene="ruvC" /locus_tag="RTM1035_06708" /EC_number="3.1.22.4" /codon_start=1 /transl_table=11 /product="Holliday junction resolvase" /protein_id="jcventer:1101493006648_RTM1035_06708" /translation="MAALDSTRSHASHAGFGAIFARAFSVLAAWNERRATRAALSRLS DRELDDIGLSRGDIDLVARQI" gene 1371226..1371870 /locus_tag="RTM1035_06713" CDS 1371226..1371870 /locus_tag="RTM1035_06713" /note="COG0817 Holliday junction resolvasome, endonuclease subunit" /codon_start=1 /transl_table=11 /product="Holliday junction resolvase" /protein_id="jcventer:1101493006648_RTM1035_06713" /db_xref="CDD:31159" /translation="MRAIPKRDISATQRWQNGQFMNAHSAWCLFSFRAIAEKNHNGQG SEMRVLGIDPGLRNLGWGVIEVSGSRLSHVANGICHSSGPDLAARLLSLYEQLTDILH RFDPQAAAVEQTFVNKDGAGTLKLGQARGIALLVPAQYGLTVGEYSPNTVKKTVVGVG HAAKEQVAHMVKVQLPGVVLAGPDAADALAIAICHAHHARSSDMLARAVARASA" gene 1371867..1372529 /gene="ruvA" /locus_tag="RTM1035_06718" CDS 1371867..1372529 /gene="ruvA" /locus_tag="RTM1035_06718" /note="COG0632 Holliday junction resolvasome, DNA-binding subunit" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase motor protein" /protein_id="jcventer:1101493006648_RTM1035_06718" /db_xref="CDD:30977" /translation="MIGRVAGRIDYRGTDHVLIDVRGVGYLVYCSERTLSALPAVGGM AALYTDLLVREDLLQLFGFPTLVEKEWHRLLMSVQGVGAKASLAILGALGPDGVGRAI AIGDWNSVTAAKGIGAKTAQRVVNELKDKAPLVMAMGAAPAPMPAAPDTDEVIETASV PTPPVPPSPGAQAEALSALTNLGYTPGEAAGAVAQVAGETPEATTAELIRAALRRLAP KG" gene 1372533..1373561 /gene="ruvB" /locus_tag="RTM1035_06723" CDS 1372533..1373561 /gene="ruvB" /locus_tag="RTM1035_06723" /EC_number="3.1.22.4" /note="COG2255 Holliday junction resolvasome, helicase subunit" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase B" /protein_id="jcventer:1101493006648_RTM1035_06723" /db_xref="CDD:32436" /translation="MTEPDPTLRGAALPEDQDRSLRPQALSEFIGQREARANLAVFIQ SARQRGDAMDHTLFHGPPGLGKTTLAQIMARELGVGFRMTSGPVLAKAGDLAAILTNL ERNDVLFIDEIHRLNPAVEEVLYPAMEDFELDLVIGEGPAARTVRIELQPFTLVGATT RLGLLTTPLRDRFGIPTRLQFYEIDELHEIVTRNAKLLNIPTDPDGAREIARRARGTP RIAGRLLRRVVDFAVVEGGGKISRALADSSLTRLGVDHLGLDGADRRYLRLIAEAYQG GPVGIETLSAALSESRDALEEVIEPFLLQQGLIQRTPRGRMLAQGGWAHLGLAAPGPK GQSDLFGK" gene 1373642..1374313 /locus_tag="RTM1035_06728" CDS 1373642..1374313 /locus_tag="RTM1035_06728" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06728" /translation="MGAKIGDLPMTDTLTPDEIAALFTRADGQFLFARWGRPIVPVVF GTDDATLSVVKGAVEAVVALAGHQMAETDPELGANLMLFFFRDWRELPEVPGLDRLIP DLGPLVAKLEATEANQYRIFRFDERGAIRACFVFLRMDAHLSAVPAETLALSQIVQSV LLWSDAAFQDRSALAALPGGAVVLRPEIGALIRASYDPVLPMVSQDPSHALRLAARIG QSGAH" gene 1374422..1375483 /locus_tag="RTM1035_06733" CDS 1374422..1375483 /locus_tag="RTM1035_06733" /note="COG1652 Uncharacterized protein containing LysM domain" /codon_start=1 /transl_table=11 /product="Peptidoglycan-binding LysM" /protein_id="jcventer:1101493006648_RTM1035_06733" /db_xref="CDD:31838" /translation="MVLLLAGVLAGHSQAQGCGGSYVVQRGDSLTLIAASFYQDAGKW TAIHSANIDQIGEDPNNLRAGMQLRLRCIDGRPTGLEGGTTAPALPLAAAAPLVVTPG NAATRRKINILTGGDFWPFTDRDAPNGGMLTEVVQAAMQSANPTQGFAIHWVDDWAAH QEPLLSNALLDIGFPWLKPECANDPESYGCANLLYSGSMFEVLMLLFVDKSRPMAFQS DADMQGKTLCRPAGYPTFMLDQRGRNWLKNGVITLKTPQSPGDCLRLLVEGEVDGVVL NEFLGRGKIKDMGLGERVGVAEGKPISIEGMHMVVHRSHPDGPAFLAAFERGLADIRA NGRYQSIIEAHMSRVWAGF" gene 1375488..1376510 /locus_tag="RTM1035_06738" CDS 1375488..1376510 /locus_tag="RTM1035_06738" /note="COG1652 Uncharacterized protein containing LysM domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06738" /db_xref="CDD:31176" /translation="MRGGIAAAILGIGLMLPQAARALCDVTYRVQPGDTLAKVAETHY DDAEQWTLIYYANQSVLAGQGQTLIAGSDLYLPCPAENPVPDATPLRQSGAELTLLTA GGDMPFADQDWPGGGMITELVNAALELSPSPVPYEIVWEPDLSQHLEPLLGQKRYDVG FPWIKPDCGLTPEVTLCKEFHFSEALMDLPVMLFRRADSDFRYGEDADILGKRLCRPM GRFTHDLDRADRRWLADGKISLTQPGSPEECFALLMAGAVDAVSLDVFEGAAKIVAMG LRGQVVPVDQPLSREALYAVISKTHWRGTTHLYRLNAGLAKLRESGRYGEIVQRHLAL FWEALK" gene complement(1376542..1377081) /locus_tag="RTM1035_06743" CDS complement(1376542..1377081) /locus_tag="RTM1035_06743" /EC_number="2.4.2.7" /note="COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /protein_id="jcventer:1101493006648_RTM1035_06743" /db_xref="CDD:30849" /translation="MPPLKTVQDYIRTIVDFPHDGILFRDVTTLFADPRGFRMAIDQM LHPYAGQPIDKVAGLEARGFILGGAIAHQLSVGFVPIRKKGKLPGAVISEEYQLEYGE AVVELHDDAIQPGERVLLVDDLLATGGTAAAGIRLIERLGGIITGCAFVVDLPDLGGH KRLTDMGMDVHTLCAFDGL" gene complement(1377330..1378205) /locus_tag="RTM1035_06748" CDS complement(1377330..1378205) /locus_tag="RTM1035_06748" /EC_number="2.4.2.28" /note="COG0005 Purine nucleoside phosphorylase" /codon_start=1 /transl_table=11 /product="5'-methylthioadenosine phosphorylase" /protein_id="jcventer:1101493006648_RTM1035_06748" /db_xref="CDD:40973" /translation="MTQTMIGVIGGSGLYEIDGLQGAEWRAVETPWGAASDAILTGTL DGVPMAFLPRHGRGHVHSPTSVPYRANIDALKRLGVTDVISVSACGSFREDLAPGDFL VIDQYIDRTFAREKSFFGPGCVAHVSVAHPTCPRLSDACETAAQDAGITVHRGGTYLA MEGPQFSTLAESNLYRTVWGCDVIGMTGMPEAKLAREAELCYASVAMITDYDSWHPDH GAVDITAIIATLTGNADKGRDMVRRLPALLGPDRAPCPHGCDRALDFALITAPEKRDP AVLARLDAVAGRVLG" gene complement(1378344..1379156) /locus_tag="RTM1035_06753" CDS complement(1378344..1379156) /locus_tag="RTM1035_06753" /note="COG1335 Amidases related to nicotinamidase" /codon_start=1 /transl_table=11 /product="isochorismatase family protein" /protein_id="jcventer:1101493006648_RTM1035_06753" /db_xref="CDD:29548" /translation="MCNNHDHDHEPKLTRRQALTGTVAIAAAATGLAATGAQAQENPY AEPAEPALPPSDMKIDLSRVALVVTDPQNDFLSPNGVTWGVVGASVERNNTVANIESL FKAAKAAGITVAVSPHYYYPVDHGWKFEGALEKLMHNIGMFDRKDPLSLEGFEGSGAD FLDLYKPYIHDGKTIVSSPHKLYGPEHNDLALQLRKQGIDQVILAGMSANLCTEAHMR ELLEQGFEVAVIKDATAAAMLPEGDGYLAALINFRYMANAVWTTEEVVAMLG" gene 1379287..1380201 /locus_tag="RTM1035_06758" CDS 1379287..1380201 /locus_tag="RTM1035_06758" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006648_RTM1035_06758" /db_xref="CDD:47669" /translation="MQITETHDRILSELDIQPEPFALCALEGVCSLGLGRVPGATLHY VLSGEGYLSLQGHAPILLAPGRLVLVPSCARHSLSHTGAGATMVPECRPAGLDLEEHV ARGEGEGTMVVLCARLHLGLRGTHGLIDLMRAPLSLDLTTTPGAARAMETLLGEVMQH RTGGRAMVRVLLLQCVIEMLRGRLEAGDPGVMWLGALADPGLWRALCAMLDDPGAPHA LESLAEAAGMSRSRFAERFQAAYGQGPMGFLRALRLARAAQLLVDQRVPVKRVAQMVG FASRSAFSRAFVEAWGQSPRAFRLGKER" gene complement(1380202..1381641) /locus_tag="RTM1035_06763" CDS complement(1380202..1381641) /locus_tag="RTM1035_06763" /note="COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain" /codon_start=1 /transl_table=11 /product="diguanylate cyclase" /protein_id="jcventer:1101493006648_RTM1035_06763" /db_xref="CDD:33501" /translation="MDSEPIVKGKSKGVASMSGKILIVDDLATNRIVLKVKLCSAHYE VVQAASAKEGLRLAAVERPDLILANAQLPDATAADFVKSLRRSDETRSTPIMILQMTH CSAERRLALSAGADDVLSKPVPETLLLARLRNLLRQHHGEQELSLQIGSTQALGFAEA PPGFDAPGRIGIIARTRAGAFGLQTLLARYSPHVTSVIDADRALSFSDAPQQADVYLL QITGAEAEEGLRLLADLKAAPRSRARPIIALVEADAAALGVTLLDMGADDVITGPPDA RELILRLSAQLRRKRRGERLRRALRDGLNAAMLDPLTGAHNRRFALPFLQQLIETSQL SGESFAVMLADLDFFKQVNDRHGHAAGDRVLCEVTHHLRAHLREGDMLARIGGEEFLI VTPATSRRRAQRTADRLCAMIAQTPIPLASGLAPLHVTISIGVTMATPAPSRPAASVG QLLEEADRALYAAKAQGRNMVTFCARSAA" gene 1381686..1381964 /locus_tag="RTM1035_06768" CDS 1381686..1381964 /locus_tag="RTM1035_06768" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06768" /translation="MQQETAETIALQALGWLATQDDLLPVFLGATGASEQDVRARATE PEFLGAVLDFLMMDDARIVGFCDAQGLKYETPMMARAALPGGAQMSWT" gene 1381961..1382653 /locus_tag="RTM1035_06773" CDS 1381961..1382653 /locus_tag="RTM1035_06773" /note="COG0546 Predicted phosphatases" /codon_start=1 /transl_table=11 /product="HAD-superfamily hydrolase subfamily IA, variant 3" /protein_id="jcventer:1101493006648_RTM1035_06773" /db_xref="CDD:30892" /translation="MSRADGILFDKDGTLFDFHATWSVWAHGVISDLSAGNADVMARM ADEAHYDLVARRFHPTSPIIAGTNREAAECLGRALPGRAIEEIEEHLMMSSGSAPLAP AVPLAPYLEGLAARGLRLGVMTNDTEYGARAHLGAAGVLGHFDFIAGFDSGYGAKPAP GPLLAFARAMALEPARVVMVGDSTHDLVAGRAAGMQCVGVLTGTATCSDLEPLADIVL PDIGHIPAWLTA" gene 1382650..1383537 /locus_tag="RTM1035_06778" CDS 1382650..1383537 /locus_tag="RTM1035_06778" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="membrane protein" /protein_id="jcventer:1101493006648_RTM1035_06778" /db_xref="CDD:40969" /translation="MRQHPLFGLALATFGALMLTPDALFMRWSGMGGYQMVGWRGLLM GLVFLILWALTSKHRLRDLSILASGYAIGIVVCQYANATLFSLGIANAPVAVVLFAVA TVPVFAAIFARAIIGEPTRLATWITIAVVMGGIALAVFGGGHGDVTLDRAALWGALAG LGVAMVLALNFVILRAQPQVPILLVIGLGAVLAGATGVIVTGPAAMMQGEVWAIAICG LVILPVSFFSLSLASRYTHASNVSLLLLLETVMGPLWVWLGTGEGPTPMMLLGGTIVV VSLAIYLWQTGRRRMALQS" gene 1383638..1385200 /locus_tag="RTM1035_06783" CDS 1383638..1385200 /locus_tag="RTM1035_06783" /note="COG5598 Trimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase family protein" /protein_id="jcventer:1101493006648_RTM1035_06783" /db_xref="CDD:46144" /translation="MAEDLKRRTRSGGRAGGVARRGSAVIEQMPWNPPINRDRPTEPL TDAGVLAIHDGAMRILEEIGIEFLNPEAVAILRASGGCKINGENVRMGRDFVMEIIGR APESWTITPRNPDRTITMGGNHLNFGNVSSPPSYWDMKIGRKVAGTREMCQNLLKLTQ YFNCIHFAGGYPVEPQDIHASVRHLDVLYDKLTLTDKAMHAYSLGAERVDDVMEMVRI AGGLTHEEFEASPRMYTNINSTSPLKHDYPMLDGWMRLARRGQGLVVTPFTLAGAMAP VTMAGAVAQSIAEALCAVVLAQIIRPGAPCAIGTFTSNVDMKSGAPAFGTPEYMRATQ MTGQLARFYKLPMRASGVCAANVPDGQAMWETSNSLWSAVQAGAHMVYHAAGWLEGGL IASPEKFIMDCEILQQIQRYMDPMLTATGPDDIAIEAIREVGDKGHFFGIQHTQDRYT TAFYQPFLSDWRNYEAWEAAGAVWTPARAHQVFQDIIAGFEAPPMEDAVREELADFVA RRKAEGGAPTDF" gene complement(1385412..1386110) /locus_tag="RTM1035_06788" CDS complement(1385412..1386110) /locus_tag="RTM1035_06788" /note="COG1432 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06788" /db_xref="CDD:31621" /translation="MSTLPPTRLTPAPRLSAFVDAENIPVTHARTILDLARRYGDPDL LRAYGNVGLLSDWDKLPGFQFIHSGCGKNATDMLICVDAMERALSDQCAAVLLVSSDQ DFTHLATRLRGYGLTVIGAGEAKTSERFRAACSVFEELEGCRESENPIIFDETDARIY RIIKRDSKQGKGVAVTHLSNQMRTEHQFCISKHPDKTWKKYLSNRKAIYDVTLHDGLN MVRYRPEAFRLATA" gene complement(1386288..1386695) /locus_tag="RTM1035_06793" CDS complement(1386288..1386695) /locus_tag="RTM1035_06793" /note="COG0733 Na+-dependent transporters of the SNF family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06793" /translation="MVSLAGVYFYFHNSDVNLIGLGVSVVTISALTGIPLIFYASLRL NAATLARERVYSGVPGQLIHKPLEGPLLLRRSMVAGSVKSRALAMFSGCIGFGLEFLL MSYLTGGGGFFVLYALTGAMLAVQAIIAAKLIR" gene complement(1386938..1387681) /locus_tag="RTM1035_06798" CDS complement(1386938..1387681) /locus_tag="RTM1035_06798" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein" /protein_id="jcventer:1101493006648_RTM1035_06798" /db_xref="CDD:30945" /translation="MSRLVTIASSTALALVLWQALVTLAALPPFILPGPARVAETLWA SRALIAHHATITAAEVLIGLALGAILGGLSAIGLASSPMARRLIRPIMVFSQAIPVFA LAPILTLWLGYGLWSKVAMALLIIYFPVTSAFFDALMRTPPQWLDLARVMGANRARLM WHIRVPAALPGFASGLRLAAVYAPIGAIIGEWVGASKGLGYLMLLANGRAKIDLMFAA LIVLAILTLLLHAGVDRGCRKWLDGKAVG" gene complement(1387678..1388334) /locus_tag="RTM1035_06803" CDS complement(1387678..1388334) /locus_tag="RTM1035_06803" /note="COG0819 Putative transcription activator" /codon_start=1 /transl_table=11 /product="pet18 protein" /protein_id="jcventer:1101493006648_RTM1035_06803" /db_xref="CDD:31161" /translation="MRPTEHLKSLVATDWQAATRHPFTDQLAAGTLPKARMLAYLQQD YLFIEDFVRLLASAIAHAPSLPDAIPAAQFLGLISGPENTYFLRAIAALGGTTEPPAT PHPITAEFQALMRAAAKSGSYAQMIAVLSVAEWTYLDWASPHANRAADLPFWFGEWIT LHSGPGFEGVVTYLRGQLDQVWPSLTPEDQAAAQSAFVTATRLERAFFDAALAGYPAA " gene 1388317..1388454 /locus_tag="RTM1035_06808" CDS 1388317..1388454 /locus_tag="RTM1035_06808" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06808" /translation="MFGGAHLFLLSGGGAQAGQKTALRRESFGVIHGAWHRGCGRGHI L" gene complement(1388347..1389072) /locus_tag="RTM1035_06813" CDS complement(1388347..1389072) /locus_tag="RTM1035_06813" /note="COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006648_RTM1035_06813" /db_xref="CDD:48292" /translation="MTAPPSLTLDGHARIGAVPVFGPLRLTLSAGRITCLLGPSGVGK TTVLRLIAGVDEVTEFTGTITASDGGPLSGRMALMAQGDMLMPWLDVLGNVTLGARLR GTPRDVARAREMLARVGLADHADKRPHALSGGQKQRVALARTLMEDRSIVLLDEPFSA LDARTRAQMQDLSATHLAGRTVLMVTHDPAEAARMGHAIHILTETGLEDVTPPAAPVP RAVDDPETLAAQGRLLARLRAPA" gene 1389345..1389947 /locus_tag="RTM1035_06818" CDS 1389345..1389947 /locus_tag="RTM1035_06818" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06818" /translation="MHGLVNRAIERFVRDTYGRDVWIGTIQRLDLGFTEFEAMMVYEA RITEEVLTAVGARLARGRDELLEDIGTYLVSHPATEALRRLLRFGGVDYVEFLHSLDD LPERARLAVADLGLPALELQDRGAGVYALHVGLPKGHDLRLGPVVVGLLRAMADDYGA LALVEHQGDGADYEIIEVRLLDEGFAHGRAFALGLGESAA" gene 1389944..1390954 /locus_tag="RTM1035_06823" CDS 1389944..1390954 /locus_tag="RTM1035_06823" /note="COG2199 FOG: GGDEF domain" /codon_start=1 /transl_table=11 /product="diguanylate cyclase, putative" /protein_id="jcventer:1101493006648_RTM1035_06823" /db_xref="CDD:30164" /translation="MTVQDRGLLPLLAGLCPMHAVLDAEGHLVQAGPTFAKLFGARAL QGMRFLDLIELRRPHQAGNMADLLACAGARLRLRLRAAPHTALKGVLLAVPGGGAVVN LAFGISVVEAVRDFDLTGADFAATDLTTEMLYLIEAKSAAMDASRKLNLRLQGARIAA EEQAFTDMLTGLRNRRALDHVLDRLMQSEQDFALLHLDLDFFKQVNDTLGHAAGDHVL QEVARRLRDEVRSDDLIARVGGDEFVILLLGMTERAPVGDLADRMIARLEEPVPYRAQ DCRISGSIGITLSCAYDSPEPVRMMADADLALYAAKGRGRGCARFHESPLPRAASAHG IA" gene complement(1391061..1391933) /locus_tag="RTM1035_06828" CDS complement(1391061..1391933) /locus_tag="RTM1035_06828" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="Magnesium-chelatase, BchO" /protein_id="jcventer:1101493006648_RTM1035_06828" /db_xref="CDD:40647" /translation="MDWQRDLATWPLNAQSRRIHHPPHQWHLQEMGNGPLALLLHGAG ASTHSWRDLMPLLAQSHRVIALDLPGQGFSRAGNRRRLGLPGMAGDIAALCQSEGWHP DLILGHSAGGAIALELATRLRTPTDQPPDIACVNAALGPFEGVAGWLFPVLAKVLALN PLTPTLFTLGTDKLTRARRLIESTGSRLTPEGLALYARLIGDRAHVDGTLQMMAQWDV APLLTRLGAIPNRCLLITGTGDLAVPPDTSARAAAQMPRARTLSLDGLGHVAQEEDAA RILAAILDPGNWPD" gene complement(1391937..1393595) /locus_tag="RTM1035_06833" CDS complement(1391937..1393595) /locus_tag="RTM1035_06833" /note="COG1240 Mg-chelatase subunit ChlD" /codon_start=1 /transl_table=11 /product="Magnesium-chelatase, subunit D" /protein_id="jcventer:1101493006648_RTM1035_06833" /db_xref="CDD:29224" /translation="MTPSPAWARALRALTLLAIDPEGLRGLTLRARAGPVRQAFDTAL GRLPGPARRIHPDLSDTQLFGGADIAATLAAGHLIHSAGLADNPARLILTMAERTPPA LAARLAQLLDQSPDHTLFLFDEGIDAEETAPQTLCERLALHVTLDDIRHDAAPALMPA AADLAEARARLGGVTHTPEDIATLTALAASFGIDSLRAPWLALRAARALAASEAHPQV TQDDLREAAELVYPARATQLPQDPEPEQPDSPPEPEDQSQSETPDIPDDLLIAAVAAL LPPALLDQLAQRGATRRAAGSGAGARRKAHQRGRPLPARQGAPDGRGRIDLIATLRAA APWQPLRRRARPDAPGVIIHAADIHLKRYEDRADRLVIFAVDASGSSALARLAEAKGA VELLLAEAYSRRDQVALIAFRGMGADLILPPTRALVQAKRRLGSLPGGGGTPLAAALG AALTLARQSEAHGLSPTLALLTDARANITLDGRGDRAEAAKDTSTMARLWRAQGLPAI VIDISARPGPEPAHLAAEMNARHLPLPRADARRISTAVTSALGV" gene complement(1393592..1394596) /locus_tag="RTM1035_06838" CDS complement(1393592..1394596) /locus_tag="RTM1035_06838" /note="COG1239 Mg-chelatase subunit ChlI" /codon_start=1 /transl_table=11 /product="Magnesium-chelatase, ChlI subunit" /protein_id="jcventer:1101493006648_RTM1035_06838" /db_xref="CDD:31432" /translation="MTAAFPFSAIVGQDDMKRAMILTAIEPGLGGVLVFGDRGTGKST AVRALAALLPPIRMIDGSPINAERPEDTPDWSTAPLGEMVERPTPVVDLPLGVTEDRV TGALDIERALTLGEKAFQPGLLARANRGYLYIDEVNLLEDHIVDLLLDVAQSGENVVE REGLSIRHAARFVLVGSGNPEEGELRPQLLDRFGLSVEVRSPQNIEERIEVIRRRDAY ERDTEAFMVTWQAEDALIRDRILAARSALRTVQSPDEVLRDCATLCIAIGADGLRGEL TLLRAARALAAYEGDAAVTRAHLTQVAPLALSHRLRRDPLDEAGSATRIARAMVEVWG " gene complement(1394593..1395339) /locus_tag="RTM1035_06843" CDS complement(1394593..1395339) /locus_tag="RTM1035_06843" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06843" /translation="MSNLPYSPSRSGAIQTVSLSFFRFSRGIDRLWALTMMGAARFML PGVPGIGFWKLLGSGTGEGFTPIPNTGVYAILAVWPDAATARAQTKGAGVFRRYLARA SESWTLFLSPTSVRGQWAGDTPFEITTPVEKGPLAALTRASVRPRKALKFWRRVPDIS AVIGADPNVAFKIGVGEVPLLHQVTFSIWPDSQSMADFARRDGPHARAIAAVRDGDWF REELYARFRVIGERGTWGGTSPLEHIKEEQ" gene 1395410..1396966 /locus_tag="RTM1035_06848" CDS 1395410..1396966 /locus_tag="RTM1035_06848" /note="COG1233 Phytoene dehydrogenase and related proteins" /codon_start=1 /transl_table=11 /product="Phytoene dehydrogenase" /protein_id="jcventer:1101493006648_RTM1035_06848" /db_xref="CDD:31426" /translation="MLTRVDPRLIEQATRADAPHALVIGAGLGGLASAMRLGAKGYRV TVLDRLDSPGGRGSSITKDGHRFDLGPTIVTVPQLFRELWAACGRDFDTDVDLRALDP FYEIRWPDGSTFTARQDRDAMRAEVSRLSPGDLAGYDRFVKDSEARYWFGFEDLGRRS MHRLGDLIKVLPKFAWLRADRSVYAHAAGRMKDERLRMALSFHPLFIGGDPFNVTSMY ALVSHLEAAFGVHYAIGGVDAIARAMVGVIEGQGGVIRQGAEVDEIVIKEGRATGVRL SGGEGISADIVISNADAGHTYDHLLRNHKKRRWTTARLKRSRWSMSLFVWYFGTTGTR EMWRDAGHHTILNGPRYKGLVRDIFRRGVLADDMSLYVHRPSVTDPGVAPEGGDTFYA LSPVPHLGHSNPVDWAAEAEPYRQKVQKVLEDQLLPGLGAHLSASEVFTPETFRDRYL SPHGAGFSIEPRILQSAWFRPHNVSEEVRGLYLVGAGTHPGAGLPGVISSAEVLAQLV PDAVPVGVMP" gene 1396963..1398012 /locus_tag="RTM1035_06853" CDS 1396963..1398012 /locus_tag="RTM1035_06853" /note="COG1562 Phytoene/squalene synthetase" /codon_start=1 /transl_table=11 /product="Squalene/phytoene synthase" /protein_id="jcventer:1101493006648_RTM1035_06853" /db_xref="CDD:40582" /translation="MIAPQDLAHCTEAIRHGSRSFHAASKLLPRRVRDPALALYAFCR LADDAVDENREKAAAVLSLHERLDLVYAGRPRNAPADRAFAAIIDGFDMPRALPEALL EGLAWDAEGRRYETLSELRAYSARVASAVGAMMCVLMRMRERDALARACDLGVAMQLT NIARDVGEDAREGRLYLPLEWLSEAGMTPETFLRAPAPDAEVRRMVRRLLMEADTLYA RSEAGIAVLPLSARPGIYAARYIYAGIGAQVRGAGHDSITRRARTNSTQKLGWLMLAL LRAAGSVILPGSPVIYAKALPETEYLVRAAAQDAPRAADWSDTLYEALARLKAQDVAR EAGLSRDVGRVRETA" gene 1398009..1398470 /locus_tag="RTM1035_06858" CDS 1398009..1398470 /locus_tag="RTM1035_06858" /note="COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)" /codon_start=1 /transl_table=11 /product="TspO and MBR like proteins" /protein_id="jcventer:1101493006648_RTM1035_06858" /db_xref="CDD:43007" /translation="MIWLIFGIFLAACFAAGSTGGLFPPGDWYDRLKKPWWTPPNWLF PVAWTTLYICMAAAGARVAVSPDNGIAMALWSLQIALNGLWTPVFFGLQRMRLGLIVL CALWASVALTLVALWSVDWIAGLLFVPYLTWVSVAGMLNLAVLRLNPDAAR" gene 1398568..1399377 /locus_tag="RTM1035_06863" CDS 1398568..1399377 /locus_tag="RTM1035_06863" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06863" /db_xref="CDD:35032" /translation="MPQNEVKPLGVPEMGDVRFDMLAEALRRGWSDMRRAPGFAVIFA GVYVGIGLILAWITWVTGKSYWLIFAAVGFPLVGPFAAVGLYEVSHRLSMGRALVASE IFGVIAHQRRRQLPSICAIIIMVFLFWFFLAHMIFALFLGLSTMTNVSSSLEVYFTPE GLSMLAVGTGVGAVFALLLYSLTVVSLPLLLDREVDFVTAMLTSLRVVIENPLPMLVW AALVAGLTFLAMLPAFLGLFFALPLLGHATWHLYTLICEAGGAAPRTPWSI" gene complement(1399403..1399615) /locus_tag="RTM1035_06868" CDS complement(1399403..1399615) /locus_tag="RTM1035_06868" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06868" /translation="MTDLDSAMIRAHATGDRAALISLYTQAADRANTLDAACFFLTHA YIFALEAGALEAARLHARLVAHGREA" gene complement(1399612..1400769) /locus_tag="RTM1035_06873" CDS complement(1399612..1400769) /locus_tag="RTM1035_06873" /note="COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit" /codon_start=1 /transl_table=11 /product="Rieske (2Fe-2S) protein" /protein_id="jcventer:1101493006648_RTM1035_06873" /db_xref="CDD:34257" /translation="MPALTDLTNVRTPVEQANGLPNAHYIDPAVFEEEKHALLFSQWA GLAVGADVPEPGDAKPLEFLGMPLLLLRDKDGEVRVFQNICRHRGMILVEEPRKIEGA IRCPYHSWCYSTKGALVSTPHVGGPGHNTHASIKRDELGLTEIRSHIWRDVVWINVSG DAPAFDVAMADLIARWGEFDLPVYHGGADSRFTLEVQTNWKLAVENYCESYHLPWVHP GLNSYSRLEDHYHIEKPGAYSGQGTMVYRQLTNETGQTFPDFAEVGAKWNEQAEYVAA YPNVLLGVHRDHAFVIILEPKGPERTVEHIHLYYSVPNADGGLRLRNTQLWKTVFEED IFVVEGMQRGRHAPYFDGGRFSPVMDSPTHCFHDWVAGRVEAHRAMGRAAE" gene complement(1400884..1401444) /locus_tag="RTM1035_06878" CDS complement(1400884..1401444) /locus_tag="RTM1035_06878" /EC_number="2.2.1.6" /note="COG0440 Acetolactate synthase, small (regulatory) subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase small subunit" /protein_id="jcventer:1101493006648_RTM1035_06878" /db_xref="CDD:30789" /translation="MSPLQIKKGSSKHSAYNLRPTFSDVQETHTLAVLVDNEPGVLAR VIGLFSGRGYNIDSLTVAEVDHTGHTSRITIVTTGTPQVIEQIKAQLGRIVPVHKVND LTVEGLSVERELALLKVEGSGDKRVEALRLADIFRANAVDSTLTSFVFEITGAPEKID AFAELMRPLGLVEMARTGVAALPRGL" gene complement(1401530..1403284) /locus_tag="RTM1035_06883" CDS complement(1401530..1403284) /locus_tag="RTM1035_06883" /EC_number="1.2.2.2" /note="COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]" /codon_start=1 /transl_table=11 /product="acetolactate synthase III large subunit" /protein_id="jcventer:1101493006648_RTM1035_06883" /db_xref="CDD:30378" /translation="MTRQMTGAKMVVQALKDQGVDVVFGYPGGAVLPIYDEIFQQNDI RHILVRHEQAAVHAAEGYARSTGKPGVVLVTSGPGATNAVTGLTDALMDSIPLVVLTG QVPTFMIGNDAFQEADTVGITRPCTKHNWLVSDTARLADTLHQAFHVATTGRPGPVLV DIPKDVQFASATYTAPHQARVSHYQPRVKGDIEGITDLVAALEKAKRPVFYTGGGVIN SGPEATRLLRELVEATGIPTTSTLMGLGAYPANGKNWIGMLGMHGLYEANMTMHGCDL MINIGARFDDRITGRLDAFSPDSIKAHIDIDPSSINKVIRADIPIVGDIANVLSDVLE VWKARGAKVNREAIAKWWERINEWKKVDCLKFTQKGKTIKPQYALARLEALTKDHDRY ICTEVGQHQMWAAQYLGFNDPNRWMTSGGLGTMGYGFPASIGVQIAHPEALVINVAGE ASWLMNMQEMGTAMQYHLPVKQFILNNERLGMVRQWQELLHGERYSSSWSESLPDFVK LAEAFGAKGILCNDPADLDDAIMEMLNYDGPVIFDCLVEKHENCFPMIPSGEPHNKMI LGEASTKDAIKEGGAVLV" gene complement(1403693..1404295) /locus_tag="RTM1035_06888" CDS complement(1403693..1404295) /locus_tag="RTM1035_06888" /note="COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator, LuxR family protein" /protein_id="jcventer:1101493006648_RTM1035_06888" /db_xref="CDD:32379" /translation="MVAEGIQSILESYEDVEILATLGNGQAIIDRVESLAPDVILLDL NMPGLGGLTTTEIILEKRPETRILILSMHDSPEYISSALSHGAAGYVLKDVPTDEIKR AIDAVMTGQRYLCTGAKGSLEPYENPEREQLTNREQTILLQLAQGKSNKDVAQALDIS VRTVETHRKNIKRKLGIASTAGLTRYALEHGVLQGTGVRI" gene complement(1404337..1405764) /locus_tag="RTM1035_06893" CDS complement(1404337..1405764) /locus_tag="RTM1035_06893" /note="COG4564 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /protein_id="jcventer:1101493006648_RTM1035_06893" /db_xref="CDD:34202" /translation="MQRLFARIRLNYGQKLFLIATLPLILTALAISVVVTLQSRQLAE REIETLEAQLIEAKRAELKNYLSIARTAFVNIYGRAAPNDEAAMEQVSQILAGMLYGQ DGYFFVFNYDGTNLVSPRRTELIGRNWTGLEDEGGQPITDELIRLARTGGGYHSYEWP KPSTGERAQMVTYVIGLQDWRWAVGTGVFIDDVVATVTASRQMVEARVERTFFYIGAA MLAALLLVFVSGLFINIRERRLADAKLKKLTQRVFDAQEEERRRVARELHDGISQILV GVRYALDTAKRRLAAGDARAADTLERGITHLSGAIQEVRRISRDLRPGVLDDLGLGPA LKTLAEEFGKRTGITTEFSTVVFRNRLDDEAKIALYRVAQEAFTNIERHSGATRVTVD VRGHTHGATLRIADNGCGLDRAKPSGTPGGGLGLRNMQERVEQLDGTLTVISGKTGTT IEANVPLTHLLPPQERPNPKEKARV" gene complement(1405812..1407074) /locus_tag="RTM1035_06898" CDS complement(1405812..1407074) /locus_tag="RTM1035_06898" /note="COG0659 Sulfate permease and related transporters (MFS superfamily)" /codon_start=1 /transl_table=11 /product="sulphate transporter" /protein_id="jcventer:1101493006648_RTM1035_06898" /db_xref="CDD:31004" /translation="MTPKLFTTLPGYTGALFRADLFAGISVAMVALPLSIAIAIASGA DPASGLTTAIIAGFLISALGGSRVQIGGPTGAFIVVVYGVIAEHGQDGLIIATLMAGV ILVVAGRLRAGSLVRHIPEAVINGFTIGIAIIIATSQIKDFLGLTTTSLPAEFLEKIE TLWQARDTFNPQALVIGLATMVLIVGLRRAAPRYPGLIVAVGLTSAAVALWHLPVDTL LSRFGPLPNTPNLPVVPDLSLSRMIDLLPSALIIAFLAGVESLLSAAVADRMIGDKSQ PNAEVVANGVANIGSALFGGLPATGAIARTATNVRAGGRTPVAGMIHALVILLVMLLA APLAGYFAMPALAGLLILIAWNMSEPHKWRGYMADRPSDRVLLVLTLVLTVLADLTVA IGVGVALGLALRLRRGDVPPADWRPPEH" gene 1407320..1408405 /locus_tag="RTM1035_06903" CDS 1407320..1408405 /locus_tag="RTM1035_06903" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="bacterial extracellular solute-binding protein, family 7" /protein_id="jcventer:1101493006648_RTM1035_06903" /db_xref="CDD:34281" /translation="MDRRSFLKNTALGGGAAVAASTLAAPLYAQGARNLTMVTTWGRG LAGVFDAAQRAADNINGMADGSIVIDVKGAGELVGAFEVFDAVTAGQADMYHGADYYF VGQHPAYGFFTSVPFGMTAQELVNWYYHDGGAALHDELGQIFGLKSFLAGNTGAQAGG WFSKEINGPEDFNGLKFRMPGLGGLALGKLGASVQNIPGAEVYQALASGAIDGTEWIG PWADEKAGFQEITKFYYTAGFHEPGAGLSIGMNREVFESLTPAQQKIIEIGCAEAHQW NLAQFLSNNSSALQRLQSNGVKTLEFPDSVWDAFGQASDAVHQENMGDEIYKRVYDSY MASMRSSSAWINKSDGAYTAQRDRVLG" gene 1408509..1409399 /locus_tag="RTM1035_06908" CDS 1408509..1409399 /locus_tag="RTM1035_06908" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="TRAP-type mannitol/chloroaromatic compound transport system small permease component-like protein" /protein_id="jcventer:1101493006648_RTM1035_06908" /db_xref="CDD:34283" /translation="MLDAVLWIFQNIGMAFYNLAYAISHPASWLDWSDKEAIMRVVYY GGSVEFFFVAFTVFLVITAVGLWKNAFLWGCVRGLEGMANTVGRFAAWAGLIMVIQQI LIVFIQRIFARPDMVFGIGIPLQLDISWYSEELKLYNALIVTLCATYTFVQGGHVRVD LIYAPVSHATKKIIDMVGSLIFMMPMAVLTWMYGWFFMWRHLIVPNPSASETLDRLLM KSRALRWNVETIGFSPNGFNGYFLFKVLLVLFAGMVFLHAMAFFWRSYLEFKEGPDSL GKYLDRDTLGQGEEAFEGTH" gene 1409414..1411771 /locus_tag="RTM1035_06913" CDS 1409414..1411771 /locus_tag="RTM1035_06913" /note="COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP transporter, DctM subunit, putative" /protein_id="jcventer:1101493006648_RTM1035_06913" /db_xref="CDD:34282" /translation="MLFGLDGVEIGLIIVFLCLFGGILSGFPVAFAIGGAGVVAFGII AGLDSAGLLIHQAIDTSSEAYNAIVASGVRPDAISVFRYPDLPRAAQPVFPQGWEVAL DRNVSFLVNRINERVLAGASIETLLAVLMFVMMGITLERSKIANDLLTTMSRVFGPLP GGLAVSVVVVGTFLAASTGIVGATVVTMGLLSLPTMLRAGYSPQLATGVIAASGTLGQ IIPPSIVIVLLGTLAGDLYSVAQENRAQAVGCTDALTYLGEPAVVSVGTLFQAALLPG VMLALLYGLYAFGYALVNPSKAPAVQIASGPRGEVITRGEGFTWFLGVPVALIAGVML FSTLGVVGSQSLIVDSFSDQGSSASLRTNVSPECQAAMIELHGQSKWDAAVAEQQTID AAGGVAASVRLTPEEIAALRAQKEVDAAPIGTGVATLMVMLALTLAVARGVAPSANPA PLLIGALGILLGLLVDIALIRPSTSAGVTVLLLLIPLAMACYGCAHGAVRMAKNDLIR VVFPPLVLIVAVLGSILGGITNPTPAAALGAGGAIMLAAYRKLRDQDRSPKIIILATL AVVLSILIGINFDLRINQGGVSFESWVAFFFAYAAYLYAVFGLLFACWVLYTGGVLTP VVRETAKVTSMVFTILIGSQLLNLVVISFGGEHYIQEFLKSFDNELKVFLIVMLVLFV LGFVLDFLEIIYIVIPIVGPVIYGGTFDPKWVTIMIAVNLQTSFLTPPFGFALFYLRG VAPKEVTTGHIYRGVIPFVLIQVGALGILWFFPSIVTIVPALMAN" gene 1411947..1412033 /locus_tag="RTM1035_t07498" tRNA 1411947..1412033 /locus_tag="RTM1035_t07498" /product="tRNA-Ser" gene complement(1412328..1412588) /locus_tag="RTM1035_06918" CDS complement(1412328..1412588) /locus_tag="RTM1035_06918" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase IS3/IS911" /protein_id="jcventer:1101493006648_RTM1035_06918" /translation="MHVSGAKRLKALEAENTKLKKLLAEQMMDVSTLKGCRLRRACGL VGINPRAYRQLPTRSEDADLRGYPCMMVAHNGTERTSNAILK" gene complement(1412636..1413319) /locus_tag="RTM1035_06923" CDS complement(1412636..1413319) /locus_tag="RTM1035_06923" /note="COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /codon_start=1 /transl_table=11 /product="Transcriptional regulator, Crp/Fnr family protein" /protein_id="jcventer:1101493006648_RTM1035_06923" /db_xref="CDD:31008" /translation="MKQSDEKATSLLSSLPTEGWLHEQPLAFQTRMAMAGRWMTVPRG GMIYTIGDAPDALFGLGQGLLDVSIAIGGDEEVTIYRAKPGFWIGDSALLAEKNRGVT VSAATDCRVFRIPINAVRRNLANNPEDWPCFFRLSHNNTMLALRVHAETLSLPPRARF ARMLLRLASDDGTVRVTQEDLGRMAGMSRAAFRRAFATLIEVGAVRTDYGGLRIVDHA ALERAAQPD" gene 1413501..1414247 /locus_tag="RTM1035_06928" CDS 1413501..1414247 /locus_tag="RTM1035_06928" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06928" /translation="MSWKTCIIAALTVSPLATVGAAQEASWEFTLSPYVWTPGASTSI ETGFGTIDADAGVGDVLSATDFAFMGVFEARRGPWSLIADLVYTDLSERQNAPFGALF SRATVETELRVASGYAAYRLKEGAQVSVDLMGGFRAVSADLDVRLAPGTLPGQRFNLG DTWIDPVLGGRIRVALNSRWYLTAMADFGGSGGGDDRTWQAVGMLGYQINDRWSVQGG WRHMTIDREIKGRDVEIDLGGPLIGLTARF" gene 1414279..1416378 /locus_tag="RTM1035_06933" CDS 1414279..1416378 /locus_tag="RTM1035_06933" /note="COG2015 Alkyl sulfatase and related hydrolases" /codon_start=1 /transl_table=11 /product="hypothetical beta-lactamase" /protein_id="jcventer:1101493006648_RTM1035_06933" /db_xref="CDD:32198" /translation="MTTRRQFIGAIPVTGAAFALSGALFNEGPALAQEAPPPLAGHFH PKGKAPSVHTIRALEASVANLPLSDTRDFEEQARGFLAPLPDLKIMADAGNVAWDHER FLFNETQETFDSIHPSLLRIARLNNNYGLYEVIPGIYQVRGPDLANITFVRGKTGWII FDIMTAAETARASWELFQREVGDGLPLKAVIYSHTHGDHFGGVRGIVSDEEVTSGRVE IIAPGGFMDFTISENVYAGNAMNRRLFYQYGLLLPVAPHGFVTQGLGHVVPAGASGLI APTRSITEPIEEVEIDGLRMIFQNTPNTEAPREMNTYIPEMKALWMAENVTATLHNIY TLRGAPVRDPLNWSKYIADALFRFGQEAEVMFASHHWPRWGNARIQEVLRDQRDLYAN ANNQVLHYANQGVTINQIHNVYEVPKGLQAKWHCRGYHGSPEHNARGVAQRFLGFWDC NPATLIPLSPADSAPLYVEMMGGSERIIARSRALFDAGDYLLASEIMNKLVQAEPGNV EAKDLLADVFEQLGYQQENPGLRNSFLAAAYELRTGIPQGATASSTGPDIIRAMSTEL FLNFLGIRMDSQRAEGLEFSINLVTPDNGEQFIVELRNATLTNIQGFQDPAADLTLTI NRADLEVTMAGIKPLEEQLADGTATAEGDLAILGQLAALMVDFDPRFEIMPGTKAKSD AADTDPYAATVGAVISE" gene 1416523..1417329 /locus_tag="RTM1035_06938" CDS 1416523..1417329 /locus_tag="RTM1035_06938" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06938" /translation="MRRHLVAVGLSLLLAGPWGGQALAQDAEELAQQLANPVASLISV PFQFNQDDGIGPNGDGSRLVLNVQPVIPFSIGENWNLISRTIVPIIHQDDVVPGSGSQ SGLGDILQSFFFSPKAPTAGGVIWGLGSVVLFPTATDDLLGSEKWGAGPTGVVLVQRG PWTVGGLANHIWSFAGDGARADINRSFVQPFVSYTTENAWTFTLQTETAYDWETEDWA VPVNAVASKLVRIGGKPVSLFGGVRYWADSPAAGPDDWGIRFGATFLFPK" gene complement(1417421..1418572) /locus_tag="RTM1035_06943" CDS complement(1417421..1418572) /locus_tag="RTM1035_06943" /note="COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain" /codon_start=1 /transl_table=11 /product="Putative trypsin-like serine protease" /protein_id="jcventer:1101493006648_RTM1035_06943" /db_xref="CDD:30614" /translation="MGTIARNTTELSMMSSTPLSRRLAGSAALVAVLGATGLSLGIAS PALAVPAGGYGDLVAAVSPAVVYIEVTAKSQPTNMSGQLPEDLPEELRRQFERMMPEG EMPARQGLGSGFIISEDGKIVTNNHVVEGAETVTVKLADGRAFDATVIGSDPLTDVAV LQLDTEEPLPFVRFGKSDTMRAGDEVVAVGNPYGLGGTVTSGIVSALSRNINSGPYDD YIQTDAAINRGNSGGPLFNNAGEVIGMNTAIFSPDGGSVGIGFAVPSDLVQHIVADLS DDGMITRGWLGVQIKPMPEDIAQVLGYDTPRGAVIENVTPDSPAAKAGLMQGDIILSF NETAIAELRDLTRAVAATDPEAVVPVTVLHKGTEKTLDVTIGTLANPNA" gene 1418709..1419380 /locus_tag="RTM1035_06948" CDS 1418709..1419380 /locus_tag="RTM1035_06948" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="jcventer:1101493006648_RTM1035_06948" /db_xref="CDD:31088" /translation="MKLLVVEDDATTGAYIARGLREEGQSVDLVSNGRDALIQATSGP YDVLIIDRMLPEIDGLTLVKTLRGAGNHTPVLFLTSLGSVDERVSGLNAGADDYLVKP FAFGELSARVAALARRPHALEQETVLRAGPLEMDLIARKVTREGQEIDLLPREFAILE HLMRRKGRVQTRTMLLEAIWDISFDPMTNVVETHISRLRAKVDKPFTTELIKTVRGAG YRIDA" gene 1419377..1420729 /locus_tag="RTM1035_06953" CDS 1419377..1420729 /locus_tag="RTM1035_06953" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensory histidine protein kinase" /protein_id="jcventer:1101493006648_RTM1035_06953" /db_xref="CDD:30987" /translation="MTLRRAFLLRSMPIRLAAGLVLLFALVSLLGLWASYLYTRSSFE QTLRADLTQDMAGFRAAPSAAALAALVEAEARSTDPERVVLSYFAPNGRHYGNALVAR DADGYRIISYLPGNPEIEGRFLALTTSLQGGQLTVARSLAHIDALRDAFLNILGISLL PTVLVALSGGWVLARRGARHVAVISGTLDHLTSGNREARVGDVTGWSDDLARIAAKVD QMARAQEDSVESLRQVSSDIAHDLKTPIQRAAVHLDDLSQSPDLTKEAREMLGRAQAE LDRIVAIFHALLQLSQIESGSPRGRFAPVDLSELCQTLCDVYDPATAENGQMLICALP DAPLRPVMGDRTLLGQVLANLIENAMHHTPQGTTITVALSEAETHIDLSVTDNGPGIP EAERDLVLRRLYRLDRSRGTPGNGLGLSLVAGIAQVHDAALTLEDAGPGLRVRLRFPA " gene complement(1420827..1422503) /locus_tag="RTM1035_06958" CDS complement(1420827..1422503) /locus_tag="RTM1035_06958" /note="COG4425 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06958" /db_xref="CDD:34121" /translation="MRDKENRPDGVIELLPRLFGPLSPAGILVGAVLFAMSLTPSMVP RGPEIQGALGGLVFAIGYAAAYVVRSGVYWLGVQPAFRPSRVQIYAIYALALMICGFG LWMGAEWQNSIRVVWGLPELDGFATTFVVAIALAVAALLIFAGRLFELLAAKWYRRTA RYLPPRVARGVGLLLALGIFWAVIDGIAFRFALRTIDTTSRIADLVIPPDLAPPTDAD TPGSAASLIAWEDLGRWGRGYVISGPDRADIAAFWEKPARQPIRVYVGLTASGTVEER AKLAFDELVRVGGFERKYLVIATPTGSGWLDPGAMNTLEYITRGDVATVAIQYSYLSS PMSVIIDPENGLAESRALFDLIYGHWTAQPPTNRPRLYLHGLSLGAFLSQETVPLLNM FGDPFHGALWTGSPFLSDMWRMVQDRRHPDSPAWRPKFGNGSLIRTANQDGGLERFEA PWGPIRLVFLQYGSDPIVFFDYSLAWRRPDWLRANRAPDLGPDMRWVPLVTMLQVGFD MAVAVGTLGYGHDYAARHYIPAWAETLEPAGWTPEIEARLIDHLRDLTPR" gene 1422795..1423913 /locus_tag="RTM1035_06963" CDS 1422795..1423913 /locus_tag="RTM1035_06963" /note="COG4782 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06963" /db_xref="CDD:34393" /translation="MFRRCTLIIGVLMTLILTACSRPPEIIGIDNPALRPAVEAESTR HRIFITSSRAPSEEPGAFLSANRARTLGLASVDVLVPPTHAIGQLKRPRRLPPDPRTE FMAVDPVTYAGDVAFVDAINRELASRAADKRTILLFVHGFNNTPTDSLLRLGQFVEDT NFEGVPVLLSWASAARTIRYVHDLNSALIARDMVPEIAEILGQTKAHSVDVFAHSMGS LLTMEGLVERDRSGELGRRKNLNTIVLAAPDIDIDLFRAQLNRLSPEIRRSIFLLISE RDAALRVSARLAGGVPRVGAAPLRDLEEFGLTVIDLSDINDSSSWSHSAFAGSPDVVQ LIGAGLNSAGRFGEDTSPLIDQILTVSPIRVLRQSPGG" gene 1424104..1424298 /locus_tag="RTM1035_06968" CDS 1424104..1424298 /locus_tag="RTM1035_06968" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06968" /translation="MITRKSAQLVVSSLLRQSWKSLWARLLAWVFRFDIRLIAPLTRK LMVHYLGSLTAVTEKTAERA" gene complement(1424525..1425445) /locus_tag="RTM1035_06973" CDS complement(1424525..1425445) /locus_tag="RTM1035_06973" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006648_RTM1035_06973" /db_xref="CDD:47669" /translation="MAQRIEGQDFTSAAMMRLVAMGLARQGISIPVPTSPTAHVSLAD KRAVLGAVLACHGPLAILSIADAACAMAPEPVVQALTNARDIPDLMERWHRLERFSHG RHRVEIEQLSLHRFRLTHRARDHGPPPSMAESLLVLGLLTILTEMTGSTDVTMKTDAG AVWRSEGKWHDPRTLQGVGSVVLTAASASRTVEVHDNNPETDLVSRLRGRLVADPVRR WTVASLAAEAGAAPRTLQRRLTEGSASFSRLVTDARIEVAATHLCKSNGPALAEIAFI AGFADQAHFARTFSRTVGTTPSSYRADFGQ" gene complement(1425576..1427636) /locus_tag="RTM1035_06978" CDS complement(1425576..1427636) /locus_tag="RTM1035_06978" /note="COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /codon_start=1 /transl_table=11 /product="molybdopterin-binding xanthine dehydrogenase" /protein_id="jcventer:1101493006648_RTM1035_06978" /db_xref="CDD:31718" /translation="MRRRAFLAASAVGLVAAIGATACSRIPVIPKRPDPDVSTAIGWI AHRDGHFTLTLPRAEMGQNIATALKQVACTELGAEWDRVDVVLHATDMPRVKATVGSE SVMLFAEPLAQACAALRDALAAGQVAGLVRVRARRVSELRALRSGGLIGASPELVQAR GIVTGEPLYAADIRLPGMLYGRVLRAPASVELHSGPRRWDIDAARAVPGFVAVVEDCG PPIGKAQGLGIVAARPGALDAIAEALQVEWDVAGQHPHADIARAIDVDARLGAGALPH KVLNGAPEAGPWDVDLRLDIPMAAHGPIEPRGAVASWEDGALRVWAGTQDAFYIRDFL ADAFGLSAGVVTVQSCRIGGAFGGKTICTVEAEAAALTLAVSSPIKVQWTRAQEYALG FHRPPSSHRVRARVGQGRITDWDHAQMSSHIMFTAAVVPSWMQRGTDVFAGDGGVARG MAAPYVLGRARAAYDMVRLPVHTGPWRGLGAGPNALAIESAMDEAALAAGVDPLAFRL AHVADPFLAACLERVGEISSWGKTPAFSEGLRVGRGIACGTYKETSHAAAIADVAVDA RGRVRVTRMWCVHDCGLVINPDQVRAQCEGNLVWSLAMVLTDDLPTEDGRVTAQTFAD APIPRMTDTPTLTVDLIQSDRPPQGAGETVMVAGPGAIANAIRAATGRRLVRFPARAG DLAL" gene complement(1427636..1428091) /locus_tag="RTM1035_06983" CDS complement(1427636..1428091) /locus_tag="RTM1035_06983" /note="COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase subunit III" /protein_id="jcventer:1101493006648_RTM1035_06983" /db_xref="CDD:32263" /translation="MRFTLNGLGQDIPADWADEPLLVLLREHIGLTGAKFGCGVGICG ACTIIVEGAATRACMIRSGDIEGLNVRTIEGLADADSLHPVQQAWLDLGVPQCGYCQA GQIMAAVALLEETPDPSEDDIDAAMDGNLCRCGTYPRIRAAIARAAERV" gene 1428409..1428555 /locus_tag="RTM1035_06988" CDS 1428409..1428555 /locus_tag="RTM1035_06988" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_06988" /db_xref="CDD:28977" /translation="MTQAALAAKASVNRVTVAEIETGRKQGSVTTLRALANALGVSLD DLAE" gene complement(1428865..1430982) /locus_tag="RTM1035_06993" CDS complement(1428865..1430982) /locus_tag="RTM1035_06993" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="methyl accepting chemotaxis protein" /protein_id="jcventer:1101493006648_RTM1035_06993" /db_xref="CDD:47612" /translation="MGKIHSHNQEGNQQEMLSQLRVPFIVKVTAALLIAGLFPLWFVS TSDLERSSRQAHLSAEALLTSALNLKRKSVESYFDATVRAMQTVAASPATLDALRRLD NAVEQLHAAPTVNLDNAAMQGRFDAQRDATEDASATAAQVWINDLDERARLLQQLFIF GNPATIGSKQALANPGDGSLYSTLHAQFHPALNATLDRYGFYDFFLIEPVNGRIIYST FKETDFGTSLRSGPYRDTEFAKSVVEIIEGNTVRDYTFVDFAPYAPSNGAAAAFLLLP IRDEGALAGVFAAQLPSDFADDVLGLTTGRYGSEDAYIFSGDMGLRSIPLLSREAEVG MLFDTPLVRSINETGGTDTRFFEGISHHGDPVFAASAPLSLSGLDWRVVTEISKDEVL ADAIKGRQEAQRNMLILAAAIFFAGLLLARLLIRPIRILGSEVQGQAKQVVEALSHAA EQARSAAVAMASTAEETSRQSKAAKDSACETAASVDAVAQASEELSSSVAEIVQGIGR TAQLVDSASGQADAASRILAELERVAGRITGIVGLIKEVTNRTNLLALNAAVEAAHAG DAGRGFAVVAAEIRRLAVNTAESTAQIGEEIQNVVAAVASNSTAIHSISASISEVNAQ AGTISAAAQQQGTVTTSIASRMSSTATRMNEVDSGISEVQKASQLASTAANEVMSLMQ HVDDAALRMTDTMSEFVRRIRSI" gene complement(1431336..1432220) /locus_tag="RTM1035_06998" CDS complement(1431336..1432220) /locus_tag="RTM1035_06998" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="predicted transcriptional regulator" /protein_id="jcventer:1101493006648_RTM1035_06998" /db_xref="CDD:28977" /translation="MPLDNFANRCILVHCGAETGPISIMSDLSTNLRLLCSYRPSIST VARDIGLNRSQLNRYLAGSSSPRTALLRRICDYFGVEEYEIRLPPPDFAAIVKLRGLS SDNFSRVLRMHFDRILARNDPRIFQLSGSFFEYYWSMSTPGMVIRSLVSFAPEGEHLF YSRLERIGDPKTVVTRHFRYQGLALMTGDRVFMNDYETGAGIEVTQTVLYPDYSFRWR VLHGVKVGVSANRDHVPCAVRTYLERTPPRASLIANLRRVGLLAPDDPDLPGHILPMI DNRTSGPFGFQAHNPSVP" gene 1432281..1433018 /locus_tag="RTM1035_07003" CDS 1432281..1433018 /locus_tag="RTM1035_07003" /note="COG1794 Aspartate racemase" /codon_start=1 /transl_table=11 /product="Aspartate racemase" /protein_id="jcventer:1101493006648_RTM1035_07003" /db_xref="CDD:31979" /translation="MDRTARVAPCRATIGIVAGSGPEAGIDLWAKILRRNAAALGPAF RGDLDAPRVVVLSEPQLGLSMDLAANEGPVWDAMQSTATRIAGQSDAWAIACNTLNWF APRIASLGLPAEFVSFPGVVADWIASSGLRRIGLLGAAPVTEMGAWSAYRDLAGLVEI ETPADRAVLQDLIHDVKRLGSADPDLRPRFARIVEAMQAETLLLACTELPLIADVSTS KTLVDVTDLVADALVARSLAGRDCAVI" gene 1433042..1434280 /locus_tag="RTM1035_07008" CDS 1433042..1434280 /locus_tag="RTM1035_07008" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /protein_id="jcventer:1101493006648_RTM1035_07008" /db_xref="CDD:31027" /translation="MKKLLLTASALALAAGAASAQAACPIKIGATAPLSAPGAVTGGE AMRDAMAIAEADINAAGGVLGCEVQVVVADDEGLPERGRAVMERLIAQDQVVAVGGGY HSSVGLANMEVADAAGIPVVYAETWNDGITGAGLKHIFRIAPLSSEVAAIFSSFAATV PGVKKVVMVAENTDYGLPASEQTKAGLDKAGIASSVYTVDIGTQDFSGIIQRIKAEDP DMIIQLLTGEASYNFTQQSAEAGIGPQDLPTTCDQAALESGAFWQNVPDGNLCFVNAV GLPRALYNDKTNAFVAAYTAKTGKSAAESYAMEAYDSIMILAEAMKIAGSTEGDAIVT ALENITYQGVLGEITFPYNSANPPATAGVPDYFWHQFPNPAVTMVQYQAPGQLAADAP NVFPPVYKTGEPIWPASVQQ" gene 1434294..1435532 /locus_tag="RTM1035_07013" CDS 1434294..1435532 /locus_tag="RTM1035_07013" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="jcventer:1101493006648_RTM1035_07013" /db_xref="CDD:30905" /translation="MDHPGFFSLAILWMVLWGAIGGAVIHRAYLARDLDVTAARTVGV AVGAATGPFGLVPLYLRTPTLTRAWQALPWIAVVAVFLFAFRAADPDNVCFTSGAFVT SQLVNGLIMGTIYGLMALGLALIFSIIGIVSFSHGEFYMIGGMVVYYMTEVWAPGLGP IAAVIAACAVTFGIGAAFERAFFTPIYAGKVERPNEYAILVTFGLAFFLQYLVQGLSG ANPVKASPFFELPRSEWPAGAPIIETTRSNIELFDTISISTPRLTAAILSVVMLLALI WFLYNTWTGRALRATAQDRQAAAVAGINPGRMNMLAFGLGCMLAGLAGAVLVQAFSWL PQTGAIPALRAFVIIVLGGLGSLPGAFIGGLILGLVEAAGAGCVPDPTRAAAYLPAYG MIILTLVLLLRPQGLFGRKA" gene 1435529..1436719 /locus_tag="RTM1035_07018" CDS 1435529..1436719 /locus_tag="RTM1035_07018" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07018" /db_xref="CDD:33917" /translation="MISHAPKIAGYVAAALLVLFPLVYSAGNYDFVMHLWITAFYYAV LASSWALLAGYGGQFSFAHLAFMALGAYGAGILDNYVFLTSLPTGTCTEFGFLGTNIV FLPPSGTGDAAACLTAARATWPEGATVSRFPLILQIAFGAIVGGGAGWLIGTLVLRLR AAYLALFTVGLSEILRAVLSAEIWLTRGQAGMPMSPLFPDGITILGTTYGPAAKLPAY YVMLALFLGTLALLLWVARSRIGLFLRSLREDEDAAEALGVDTVKWKRAVFVLTAAIA ATAGAVQGHYVGLITPNTIVLLQMSLVIAMAVIGGLENVVAAAIGAILISFALEFLRT DFTILGVEIDMTTWRLVFFGLLLMLTLRFLRNGVIQGALMWIERRGVGAETVAKRRAV EEAK" gene 1436716..1437483 /locus_tag="RTM1035_07023" CDS 1436716..1437483 /locus_tag="RTM1035_07023" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="ABC-type transport system ATP-binding protein II (probable substrates branched-chain/neutral amino acids) 2" /protein_id="jcventer:1101493006648_RTM1035_07023" /db_xref="CDD:48252" /translation="MITLDVKDIRKKFGSHEVLKGVSFRIEGPELVGLIGPNGAGKTT LTNVLDGAIKPDGGTIRLNGTRIDPLHPYEIARAGLGRTFQVTRAFRRMTVLENLYVP AMAMDARVNHKEMEEKANEILAFLTIDHLRNEYGRALSGGQQKLLELGRLLMLNPDVY ILDEPFAGVHPSLMATIYKWIERVNGEGKAIILISHQMESIFTLCRRLLVLNFGDLIA DGPPAIVKNDPAVIDAYLGVEEDMSGTGLLTQEATHA" gene 1437476..1438180 /locus_tag="RTM1035_07028" CDS 1437476..1438180 /locus_tag="RTM1035_07028" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="putative branched-chain amino acid transport ATP-binding ABC transporter" /protein_id="jcventer:1101493006648_RTM1035_07028" /db_xref="CDD:30759" /translation="MLEVRNMDVGYYSDLNILSSLNLDVKPGQIVTILGANGVGKSTS LKAIYGFLLPNGGTIHLNGQPLINVPTHERINLGLAYIPQHPGIFREMTVEENLLLGA WTFRRDKARIAEKLDEQYSRFPVLKEKRRQPSGQLSGGQQRMIEIGRTLMGNPKVLLV DEPTAGLSKTYAEEVYQMLRDLRDRDNLGILLVDQEIRHALRIADYVYVLELGRNKFE GPPSEFGDLQKAFWVG" gene 1438180..1439007 /locus_tag="RTM1035_07033" CDS 1438180..1439007 /locus_tag="RTM1035_07033" /note="COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D" /codon_start=1 /transl_table=11 /product="Asparaginase" /protein_id="jcventer:1101493006648_RTM1035_07033" /db_xref="CDD:29532" /translation="MRLIHTGGTIGMVPSPQGLVPAMKLVEAAVGERARVTVLDPLVD SAAIGAADWNRLLDLIETADDPVIVTHGTDTMAYTGAALSQALAGRDAPVILCGAMAP LGTGGDAEANLDLALSAQPGPGVWLAFADRLIPAAGLVKHDSHGADSFRAVPQAPLSL PPARRFSAARIGILTLTPGIPAAMVAAALSELDGCVLRVFGAGTAPPDPALYRALSEA HQRGCALRAVSVCEAGGLVPGAYAAGAALWGAGVQNGGLDTAEAAFVRLWLHHSKGA" gene 1439004..1440296 /gene="fumC" /locus_tag="RTM1035_07038" CDS 1439004..1440296 /gene="fumC" /locus_tag="RTM1035_07038" /EC_number="4.2.1.2" /note="COG1027 Aspartate ammonia-lyase" /codon_start=1 /transl_table=11 /product="fumarate hydratase" /protein_id="jcventer:1101493006648_RTM1035_07038" /db_xref="CDD:28773" /translation="MMRQDKDSLGSINIPDHALWGAQTQRAVENFRASGIPISHFPSL IRALAQVKRAAAAVNGSQRRLDPALARAIMQAADEVIEGTHVAHFPVDVLQGGAGTSS NMNMNEVLANRALEILGHPRGAYHVLHPNDHVNLCQSTNDVYPTAIRLALMAETVGLQ AALTGLATAFAAKGTEFAGIEKLGRTQLQDAVQMTLGQEFNAFANTLREDVERLDEIP RLFAEVNLGGTAIGTGLLAPESYRAAVVPELARLTGLPLTPAQDLIESSWDTGAFVLF SGLLKRTATKLSKIANDLRLLSSGPRGGLGEISLPAMQPGSSIMPGKVNPVIPEMVNQ IAFQVIGADLTVTMAAEAGQLQLNAFEPVIAYNLLTALTLLPRGATALAQLCVDGLTA NPETCRAHLDRSTARVTAMVPEIGYARAAELAKELLLR" gene complement(1440740..1441801) /locus_tag="RTM1035_07043" CDS complement(1440740..1441801) /locus_tag="RTM1035_07043" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07043" /translation="MIHILVSGLVLFISIFLSWALFLTLRQSKAEAVLKRELKSLELA PRQIYADSVIVITNRIPVFAGGRLKTRVGSETSLEADPLVALFLFVNELGADALDGLT LDVFLRDHMKSLTIKKLGRLEFFVAAAEFGDVEFQKARRIMIRKQREAADAIRSNWRG RLSRRVETVAQAATERDSMIDQKQRWSQERVSPVADAALTDWLRVQGPDMWHEVCITV VWSESGAAGLVPFVEWLVEQPDLDRASALLLLAKAVLDAIDSETYEQHNCARNQAWMK IIHDRILAQSDSPMRFSIPQAAKADVEAFFSCGTKLGWPVPETDLAPAGVTAHQAAYT LVKNRPVESFAAWKARVLT" gene complement(1442335..1442556) /locus_tag="RTM1035_07048" CDS complement(1442335..1442556) /locus_tag="RTM1035_07048" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07048" /translation="MLVRGRRRNSNASIWILAICIAIALILRTIPEADSREVPQSYLP GMIEYLEDADIVEYRAIGAPAFAFSGERL" gene complement(1442746..1443513) /locus_tag="RTM1035_07053" CDS complement(1442746..1443513) /locus_tag="RTM1035_07053" /codon_start=1 /transl_table=11 /product="Putative transmembrane anti-sigma factor" /protein_id="jcventer:1101493006648_RTM1035_07053" /translation="MSDKTETDPELEADLLALLEGRLDPDRTLAIADHLAERPERVAD LLADARNTAALRMALSGSDDTAPPGLVAEARRLQDRLRGQRLLRRAAPFVAAVVLFTA GWTGHVAWQAAGHKSAPPLVEAALDAQAALELRHWMVSQPESAELNAQEVVAALGVDL PVLPKDWIVRDVQIVATPDRPAIAIVVDAPELGRLMLLAVARNAGDSKDPPTAFEYRG RTIALFERGRSSFVLVDESGHPEQLALSAERLLSPSN" gene complement(1443497..1444039) /locus_tag="RTM1035_07058" CDS complement(1443497..1444039) /locus_tag="RTM1035_07058" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="jcventer:1101493006648_RTM1035_07058" /db_xref="CDD:31783" /translation="MAHHNLEIVGQLEPLRRYARVLTRDAEAADDLVQATFLRAQERR GTFRDGADVRVWLMAILHNLFIDGRRSAQASEAREQAWAESRPTFVEASGEIAARLAQ LRTAFLSLNAEQREALHLVAVEGLGPAEAAQVLGVPVGTVMSRVGRARAALRAFEDGR GEVATVKPLRIVGGCDERQD" gene complement(1444069..1445238) /locus_tag="RTM1035_07063" CDS complement(1444069..1445238) /locus_tag="RTM1035_07063" /note="COG1225 Peroxiredoxin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07063" /db_xref="CDD:47971" /translation="MTAPLQIDATTLLTPGDPAPSFIQRSVANPRYSFDSAAGRYLVL CFFGSAADGHAQAALKAAYERADIFNDDQACFFGVTIDPEDEAIGRVKNRLPGYRHFW DMDLLISRLYGVAAKDRSPGSGPAAMARQWVVIDPTMRVLAAIPFRPDRGDLGEVMAL LDSLPPPGRHAGIDVMAPILFLPRVFEPELCRHLIGLYEAQGGEESGFMREIGGKTMG ITDPGFKRRKDYNIEDRDLISALQARFLRRVVPEIAKVHQFKVTRMERYIVSCYAAED GGHFSAHRDNTTKGTAHRRFAVSVNLNDDFEGGEVNFPEYGPRSFKAPPGGAVVFSCS LLHKVSKVTKGRRFAFLPFLYDDAAARLRQENARYIGETGSNYRASDQTSAEQSA" gene complement(1445647..1445721) /locus_tag="RTM1035_07068" CDS complement(1445647..1445721) /locus_tag="RTM1035_07068" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07068" /translation="MQSQENEMAEPMQTENWINGNINY" gene complement(1445892..1446029) /locus_tag="RTM1035_07073" CDS complement(1445892..1446029) /locus_tag="RTM1035_07073" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07073" /translation="MKSFAAQKRFFKMSSLILINAVGEYQDCSPRRCRKIGIKNGGSG G" gene 1446147..1448651 /locus_tag="RTM1035_07078" CDS 1446147..1448651 /locus_tag="RTM1035_07078" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="Hemolysin-type calcium-binding protein" /protein_id="jcventer:1101493006648_RTM1035_07078" /translation="MTHVFDYSSSSVGIDQFTGYSISNLFGTVDGTFLPAEFWDPLGA LSGVLSYNFVEFDEVRTGSFRFNIDAFGTFSQQVSGSGDVFSPIFYADDPEFFASEDF FTGEAQLTLFGLSSQSYLRFEGLPTLERSFGPLPSAPFADFNDATAFAVSAATLANAE HLASLQALQPASLATAIRIVAENFGPDPAAGTVRLVYTPDVTTSLTFADWIGLDPSGF NDAYGAQLVDTRSLFSNEDVEVILTDFDDSLSDAGGGFAARRVMINAGGGDDIIDMRG DATSGVLPFALTVPSIVSVDGGEGNDSISFVVKVSGFVDGGAGNDTIFGSSPSDGLAA FFEAHGGDGEDQFQGLNNGANLFFGGNDNDLLIGGFDSADTIHGGAGDDNIGAGSFFN FSLGANIYSDVANLFHGDAGNDTLFGGNGADTLHGGDGDDYILPLLGDDVVHGGAGLD TYSMSVGNGGFEGSDVSRSFGDKLIVDTGGILEFAPWMSVDFNTNLLERLGNDLVIGT LGQSSIRLVDFYSNPTGWISTSDDSREIDFARAATLSDSSPEVPEGGDTITGGDTDDT LAGDAGNDTIDGGAGNDRISASDGDDVVLGGSGNDNIGGGVGNDTIDGGDGDDVMGAG FGDDSVSGGLGNDVLAGGAGNDTLSGGDGNDSMSGSFGNDLIDAGSGADDIGGGTGRD AINAGAGNDRVGGGEGDDTISGGNGNDFLAGGGRDDIIDGGTGNDTINGGAGNDVMTG GADADQFVFSAFFDGEADVITDFEDGLDSFFIRRFDPDTGVENISNGGNGLAGFVAAM NIVDVAGGAQMTVNGNTILVEGITAAQLTVEDFQFL" gene complement(1448830..1448985) /locus_tag="RTM1035_07083" CDS complement(1448830..1448985) /locus_tag="RTM1035_07083" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07083" /translation="MEFSRASRSNEPFLGVESDLNLVTDKNVVACPVGLKGVFFEDPE ILQNRRA" gene complement(1449078..1451099) /locus_tag="RTM1035_07088" CDS complement(1449078..1451099) /locus_tag="RTM1035_07088" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07088" /translation="MVEADMTAHLNAAGQLATLLDRLDRQICGLQSASRIGKNNHALR VLDAARPVLQHEDGLPALRQRAGLMDQAGLFSGTDWGRPTHLLPNLVKHTLTQASQQT ITLEAMSLLRFLVVATGEHATPDLSPAQAEQFLTQVLSFNLDRLLGQGLNEAQRHAQN ALTPAIDRLMRYLLQEVGTDGVLDHLTDEIWRIMAQRPLQVDHVKAMILQIASALQTG TALTADAHRGADRLISALFGPTALNREDPGIPAYIDRLSRADERTVQEEAYAFARAMH DTGLVSDYHASFLRWAIEADQTKVLPDALGLSSTGLDALRCYEPLVRALVDVAIQPGT AQAVYGLALMLERGILYSPPVAPSLWRLLETPLTEECICALEATCGTALPARTHLIAG LIMFLGQPLGVGQGNNPTCQSARALSMWALNDPDYLLWLIAQVARRDRLVLHFEGEPL DTATLPPGLATSALLDADPISVLLVPHLDRAYAEMGRRCLGRPEDPHRWINPGLHGWW VGREFHIAVDVATGALKHYEDFLRHFHACYHPQYNGNQPVIHPQPAGIAVTDSGATFV GWHAITLIRVGLDPTGQMRVYFFNPNNDSGQDWGHGLVVSTQGSGERFGEGSLPFEDF AARLYLFHDDGLTPRPTVPVPDDQIASIAAKGRKSWAAGRGDLCPTPPD" gene complement(1451241..1452467) /locus_tag="RTM1035_07093" CDS complement(1451241..1452467) /locus_tag="RTM1035_07093" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07093" /translation="MTDKNSDKGFVAILGWSLRYIDALEKFDRRYVIVAPAWAESYAV EHDLPFVSWDFERLNDRSFELATTLKDMGVDVAIPLFEETVEWAGAVNSVLMKNPRLL GQSMLFRDKSLMKRRAQLGGIRVGIFEEAMDQTDVIRFLRRVNQTLLKLDGDPNDPIH FKAFDKAGCLGHRVIRTADDVASISDDEFPALLESHLDGWEFAVEAWIKDGKIQFLNI SEYVTLGYSVFVPATPELEQWRGRITQEIEKLIDVFDIDFGFIHPEYFVTSDGTMYFG EVAYRPPGFNVFELLERAYGFNAYQALVLVFDPKTTQDELDAFFPTPVTDATGHAGCF GVYPRRRVVSNLEIPPQTESHPYFDFHELNPPHAQKVTKRTAFGTHWGLVYFYGEDAV EMRDLLKAQEELDYYL" gene 1453038..1455233 /locus_tag="RTM1035_07098" CDS 1453038..1455233 /locus_tag="RTM1035_07098" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="Hemolysin-type calcium-binding region, RTX" /protein_id="jcventer:1101493006648_RTM1035_07098" /db_xref="CDD:47546" /translation="MFPDTFDITSVDDLTALNGQLLTALTFLGDQDLNNAFTINPEAI TVGDYLALIDAAEASLITTDFSFLAFSIPTIRAQLEAILTPDNVPDGLSVQQVIDQSI GVLEDIAAGDFGLLTVGFDAIRTALEGVPPETLLLDAFGFTGPGNPDIIDAFLDLLPQ FSTDAFPAWVSGDPHLKTLDGVDYDFQAAGEFVLLQSTDAQGFALQARMVPVAANVSV NQAIATNLDGTAVMIDAADPDPLHVNGAVVALADGSSLDVGEGRIYRRGDVYTIVYPG ADGAIGNGDSQVVVRVREGRLDLDVRLNAELLGSLEGLLGDGDGNPDNDIARADGTVL ARPLVFSELYGAYRDDWRISSLGDTLFSYESGESPNGFYQSDFPGAIVSLDTLDPEVL ATAREAALAAGLQEGSEAFENAVLDFALTNDESFLTSALDVPLASVGTELADTLIGNS GDDVLRGEGGDDGVFGQSGNDILDGGAGNDSIAGADGNDLISGGLGNDNIGGGLGNDT IDGGEGDDIIGAGFGDDSVTGGAGNDVVAGGAGDDTLEGGDGNDSMSGSFGNDLIDGG EGADDIGGGTGRDTIDAGAGNDSVGGGEGDDSILGGEGNDFLAGGGRNDTIDGGAGND TINAGAGNDVITGGTGADQFVFSAFFDGEADVITDFEDGLDSFFIRRFDPDTGVENIN NGGNGLAGFVTAMNIVDVTGGAQMTVNGNTILVEGVTAAQLTVDDFTFL" gene 1455450..1456337 /locus_tag="RTM1035_07103" CDS 1455450..1456337 /locus_tag="RTM1035_07103" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006648_RTM1035_07103" /db_xref="CDD:30928" /translation="MIDKLEMFIAVAQEGHFGRAAVRIGITQPSLSAGIKQLEEQLGV QLIFRGSRYGGLTPEGQATLVWARRIVGDARQLREEMRAKRHGLSGQLRIAAIPTALT WAARLCHRFNAKHPKVRFTILSRTSIEILSMLDNLEIDAGISYLDNEPMGRVSMEPLY EERYLLVCAKGARLAGREHVGWAELAGEPLCLLTPDMQNRRIINRNFAAVEVTPEAWI ESNSTVVLMATVEAGGWMTVLPEDAARFHASGKNVDLIPLIGSEPAHSVGLVAPWREP HTPVLESLLREARRLGGDS" gene 1456429..1456893 /locus_tag="RTM1035_07108" CDS 1456429..1456893 /locus_tag="RTM1035_07108" /note="COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit" /codon_start=1 /transl_table=11 /product="ATP synthase subunit E" /protein_id="jcventer:1101493006648_RTM1035_07108" /db_xref="CDD:32089" /translation="MTTPAPDDITSILAAHRDLEGPLLPILHAMQAAFGYIPEAAHRP IAEALNISRAELHGVISFYHDFRANPAGRHVLKICRAEACQAVGGAVLAEATLAKLGL AWHGTTANGAVTVEPVYCLGLCACAPAAMLDDRVVGRVDAARIDALLAEAGA" gene 1456890..1458398 /locus_tag="RTM1035_07113" CDS 1456890..1458398 /locus_tag="RTM1035_07113" /note="COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase (quinone)" /protein_id="jcventer:1101493006648_RTM1035_07113" /db_xref="CDD:32078" /translation="MKIYVPMDSAAKALGAEDVVAALRATAPEAQIIRTGTRGMIWLE PLVEIEIDGVRHGYGPATVGDVGGILDGTSPKALGPVEHLDWMKRQTRLTFARTGVID PLDLEDYAAHGGLVGLRRAIAMDAHDIVAEVTKSGLRGRGGAGFPTGIKWKTVQEAQA PQKYIVCNADEGDSGTFADRMIMEGDPFSLVEGMAIAGIGVGATRGYVYLRSEYPDAI AVMCRAVEIARGAGVLGSDVLGSGHAFDMEIRVGAGAYVCGEETALLNSLEGKRGVVR AKPPLPALEGFLGRPTVVNNVISLATVPVIFERGAQHYADFGLGRSRGTVTLQIAGNV ARGGLFETAFGITLGEVVNDLGGGTMTGRPVKAVQVGGPLGAYIPVSNFDAPLGYEEL DAKGGLLGHAGLVVFDDSADMLQMARFAMEFCAVESCGKCTPCRIGAVRGVETIDRIA AGDGTAIPLLTDLCETMKDGSLCALGGFTPFPVMSALTHFPNDFATQQEAAE" gene 1458395..1461289 /locus_tag="RTM1035_07118" CDS 1458395..1461289 /locus_tag="RTM1035_07118" /note="COG3383 Uncharacterized anaerobic dehydrogenase" /codon_start=1 /transl_table=11 /product="NAD-dependent formate dehydrogenase, alpha subunit" /protein_id="jcventer:1101493006648_RTM1035_07118" /db_xref="CDD:33190" /translation="MKDFIIPKDRDMGTPAKVGAPVTLEIDGVAVTVPEGTSVLRAAA EAGISIPKLCASDNLEAFGSCRLCVVEIEGRRGTPASCTTPVTPGMVVHTGSSKVRKI RKGVMELYISDHPLDCLTCSANGDCELQDMAGAVGLRDVRYEAPKDGGMVNHFEARNT SGEANPEWLPKDDSNPYFSYDPSKCIVCNRCVRACEEVQGTFALTIQGRGFDSRVSAG NADDDFLASDCVSCGACVQACPTATLQEKSIIELGTPDRSVVTTCAYCGVGCSFKAEM NGDTLVRMVPYKHGKANRGHSCVKGRFAYGYAHHNDRILKPMIRERITDPWQEVSWDE ALSFAATRLRSLQAQYGKKSIGVITSSRCTNEETYLVQKLARAVFGNNNTDTCARVCH SPTGYGLGQTFGTSAGTQDFDSVEHTDVVVVIGANPTDGHPVFASRLKKRLRAGAKLI VIDPRRIDLVKSPHISAAHHLPLRPGTNVAVVSALAHVIVTEGLMDEDFIRARCDWDE FQHYAEFISNPRHSPEATAMLTGVDPAELRAAARLFAHGGNGAIYYGLGVTEHSQGST TVMGIANLAMLTGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVKGPEVRAV FEEAWGVEIDAEPGLRIPNMLDAAVDGTFKGLYCQGEDILQSDPDTKHVAAGLAAMDC VIVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRKVIPPLNGYADWEITQ MLANAMGAGWTYSHPARIMEEIAATTPSFAGVDYALLEEKGSVQWPCNEAHPEGTPLM HVDGFMRGKGRFIVTEYVATDEKTGPRFPLLLTTGRILSQYNVGAQTRRTANVVWHEE DLLEIHPHDAEVRGLKEGDWVRLASRAGETTLRAMLTDRVSPGVVYTTFHHPDTQANV ITTDYSDWATNCPEYKVTAVQVSLSNGPSDWQEDYAAQAAQARRILPAAE" gene 1461286..1462116 /locus_tag="RTM1035_07123" CDS 1461286..1462116 /locus_tag="RTM1035_07123" /note="COG1526 Uncharacterized protein required for formate dehydrogenase activity" /codon_start=1 /transl_table=11 /product="formate dehydrogenase accessory protein" /protein_id="jcventer:1101493006648_RTM1035_07123" /db_xref="CDD:42600" /translation="MTAMGFSPTQSRPGLSVQGEGARRVIRALPDEVPVAFVFDGTTQ AVMMATPADIADFAYGFAVTEGIVTTQADIEGFEIAEHGNGIEARFWLRGDRQEALAA RRRYMAGPVGCGLCGIDSLEQAVRPVPSVAHVSPAFTAQEIARATDALSACQPLHDLT RATHAAGFILPGAGVVMAREDVGRHNALDKLIGALWRAGIDPAEGGIVMTSRLSVELV QKCAVAGCGLLVAVSAPTAHALRLAESAGLTLAAFARGGGFDLYSHPHRIPHEVPDVA " gene 1462106..1462312 /locus_tag="RTM1035_07128" CDS 1462106..1462312 /locus_tag="RTM1035_07128" /codon_start=1 /transl_table=11 /product="putative nad-dependent formate dehydrogenase delta subunit protein" /protein_id="jcventer:1101493006648_RTM1035_07128" /translation="MSPEKMVHMVNQIATFFKTQPGTDQAARVAAHIRDFWEPRMRQQ LREFVATGGEGLDDIALKAARMID" gene complement(1462309..1462611) /locus_tag="RTM1035_07133" CDS complement(1462309..1462611) /locus_tag="RTM1035_07133" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07133" /translation="MIYDEQSFACLNTVFLFSSQISVADQANGCLDTPEISVGGWSAC LGLCSALAPDHRNSRSKPRPRWRWRAIGRSGQRQTRLTDAREFWRGREAIPRVFTA" gene complement(1462634..1462704) /locus_tag="RTM1035_t07504" tRNA complement(1462634..1462704) /locus_tag="RTM1035_t07504" /product="tRNA-Cys" gene 1462889..1463542 /locus_tag="RTM1035_07138" CDS 1462889..1463542 /locus_tag="RTM1035_07138" /note="COG2518 Protein-L-isoaspartate carboxylmethyltransferase" /codon_start=1 /transl_table=11 /product="protein-L-isoaspartate O-methyltransferase" /protein_id="jcventer:1101493006648_RTM1035_07138" /db_xref="CDD:32588" /translation="MTDYAARRTMMVDTQVRPSDVTKFPIIDAMLSVPREAFVPTGLR EAAYMGENLDLGEGRVMLDPRTLAKMLDALEIENDDLVLDIGSGYGYSAAVIARMAEA VVAVEDKASVVAEAQRTLSEQGADNVVLHEGPLADGAPEHGPYDVITVQGAVEHLPEV LAAQLKEGGRMACLFMEGALGVVRIGYKIDGRINWRYAFNAGAPVLRGFERHAAFTL" gene 1463578..1464984 /locus_tag="RTM1035_07143" CDS 1463578..1464984 /locus_tag="RTM1035_07143" /note="COG1538 Outer membrane protein" /codon_start=1 /transl_table=11 /product="type I secretion outer membrane protein, TolC family" /protein_id="jcventer:1101493006648_RTM1035_07143" /db_xref="CDD:31727" /translation="MRTNKLRTLGGVFGLAILGLAPVTAKAETLADALKSAYVNSGLL EQNRALLRSADENVAQAVASLRPIIDWTSGITLDSSDTRSQGANRNNTSTSLNLGITG SLLVYDFGRSDFLTESAKETVLATRQTLISVEQFVLLTGVQAYMNVIRNQEFVDLRQN NLRLLREELRAAQDRFEVGEVTRTDVAQAESAVALAQSGLAAAQGDLTRAIEEFREAI GRDPGSLQTPSELPQLGENVDAAKAAALRRHPDLLQAQHNVAAAELNIRAAEAALLPT LNLTARVGASEELDGSDMSRTGSLGVEMRGPIYRGGRLTSQQRQAMAQRDAQLALLHL AGLQVKQDVGDSYANLRAARASRTASREAVRAAQVAFDGTREEATLGARTTLDVLDAE QDLLDARANLISANADVVIAAYSVLASIGELTARDLNLGVQTYDPAAYYELVKDAPIE SSPQGQKLDRVLRALGKN" gene 1465057..1465878 /locus_tag="RTM1035_07148" CDS 1465057..1465878 /locus_tag="RTM1035_07148" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07148" /translation="MSDPVTNVEIEDVLSSIRRLVSNGQAERLSTTVAAPREAGMPAA DRLVLTPALRVDEPVAEPPAEAVDAEDPDAHSVWTGMDLSEHETDIQDESAPEGIETE FSETDQTPDLPSELSAQAAEFEAMIAGRDDQWEPDGASDDDYAGGAAESVLSWSETDE PEGDEEAELDEAETAPSVDPDWDESDDLASERHVQDWQDADAADLRPAPDADADRGEG LLMDDAVLDEEALRDLVAEIVRQELQGALGERITRNVRKLVRREIHRALTSQDFD" gene complement(1465863..1467329) /locus_tag="RTM1035_07153" CDS complement(1465863..1467329) /locus_tag="RTM1035_07153" /note="COG1492 Cobyric acid synthase" /codon_start=1 /transl_table=11 /product="cobyric acid synthase" /protein_id="jcventer:1101493006648_RTM1035_07153" /db_xref="CDD:31681" /translation="MTRAIMIQGAGSNVGKSMLVAGMARAYARRGLSVAPFKPQNMSN NAAVTVDGGEIGRAQALQALAAYRAPHTDMNPVLLKPESDIGAQVIVQGRRFATLRAR DYARAKPQLLAPTLESFHRLAATADLVLVEGAGSPAEINLRAGDIANMGFAEAAGVPV ILVGDIDRGGVIAQVVGTQAVLPPQDAARIKAFAINKFRGDVSLFDDGLREIVARTGW PSLGVVPWFSDAWRLPAEDVMDIASTKGGAFKVVVPRLGRIANFDDLDPLSNEPDLSV EIIGAGSPLPGDADLVLIPGSKSTIADLAHFRAQGWDIDLAAHIRRGGHVLGICGGYQ MLGQRIEDPDGIEGPPASVPGLGHLDVVTVMKPEKRLALTQATYLETGDAVEGYEIHL GETIGPDCAHAWLRVGDRPEGAASASGRVRGAYLHGLFASDAFRAAFLAGLGARSDLS YGADVEATLDALAAHLEAYMDLDLLFSLSADIPTQSKS" gene complement(1467479..1467802) /locus_tag="RTM1035_07158" CDS complement(1467479..1467802) /locus_tag="RTM1035_07158" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07158" /translation="MMKDFVDGTAFNAEQGNRARKLFAAVVLAALDDAISDDKKYGNG PEQIARWARSRDGREVLSCAGIDPNERVVAGLMDFVSKGVRTSVALSREESERRNAAA QAEAA" gene 1468017..1468580 /locus_tag="RTM1035_07163" CDS 1468017..1468580 /locus_tag="RTM1035_07163" /note="COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)" /codon_start=1 /transl_table=11 /product="elongation factor P" /protein_id="jcventer:1101493006648_RTM1035_07163" /db_xref="CDD:41197" /translation="MPKINGNEIRPGNVLEHNGHLWAAVKVDHVKPGKGGAFAQVEMK NLRNGSKLNERFRSADKVERVRLEQKDQQFLYEENGKLVFMDAETYEQIELPADLLGE RRPFLQDGMTITVEFHESEALHAALPQKVICRIVETEPVVKGQTAANSFKPAILDNGV KVMVPPFVGPDEDIVVNTETMEYSERA" gene complement(1468659..1470026) /locus_tag="RTM1035_07168" CDS complement(1468659..1470026) /locus_tag="RTM1035_07168" /note="COG0591 Na+/proline symporter" /codon_start=1 /transl_table=11 /product="Na+/proline symporter" /protein_id="jcventer:1101493006648_RTM1035_07168" /db_xref="CDD:40563" /translation="MQALAIIGLFGLVILGSLFVAPRRATIEGFFNGTGTDGRAPGLW VLVLSQVTTWIFARSLMNSAILGYFFGIWGTLAYAAYYGSFLSGGYIVGRLRAGGAGS VQDWLGTHFGAMGKACYNFVIALRLLSEVFANLLVVGLIFAAALPEMGIARDASILIV AVLGLAYSAWGGLSAALRTDVLQMVVFLGVFAVAFVALVISPGFDLGAVLTAPGTSGA WSGQVLLLVALLQVFSYPAHDPVMMDRGFIADPETTRRSFLHAFWISTLCIIGFGFFG IQAGLVGAEYEGELIGTWATMFPAWLFVALLVSLLISALSTLDSALASAARLVVDELK LGQRSLAGGRMAMIAFMVVGTGLTLWGNQTLFDAVAISGTASMFLTPILIIGLVMGRD IALWSYLVAFGAAMFGAVLYFAREADWAVALLPEAHKYEQLLVICVGVLIAGFAAVMM GARRS" gene complement(1470129..1470911) /locus_tag="RTM1035_07173" CDS complement(1470129..1470911) /locus_tag="RTM1035_07173" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="jcventer:1101493006648_RTM1035_07173" /db_xref="CDD:40206" /translation="MMDLGIKGKRALVCAASKGLGLGSARALAEAGVDLVINARGGEA LEAAATAIRADFDVTVQTVAADITSEAGRAAVLAVAQDVDILVNNAGGPPPGLWSDWD REDFIRALDANMLTPIALIKALVPGMMARGWGRVVNITSQSVKAPIPALGLSNSARAG LTGYVAGTSRQVAGSGVTINNLLPGIHATDRATVLDEGVAKAQGISMEEAKARRCASI PAGRYGTAQEFGAACAFLCSQHAGFIVGQNILLDGGGVNATL" gene 1471103..1472116 /locus_tag="RTM1035_07178" CDS 1471103..1472116 /locus_tag="RTM1035_07178" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07178" /db_xref="CDD:47634" /translation="MTSDLAPSDHILPVYTGLDFRVVNGANMGDALSFAAELDLDDVY ELQPQARQLRLSLSLAGGAPFKIARGSEVGRPGAQIHLDCCLTLMSGTGRTTEMIVLV EVDDAGNMVEIFAMPLAQMRPKTGYALVGIDTENVLQRFAQVACVSFSRGTHITMATG EQRPVETLVRGDMVLTRDDGVRPIRWVGHSTVRAVGDFAPIRISAGALHNENDLLVSP DHRLFIYQRSDALGAGRAEVLVRARHLVNGDTVRRESGGFIDYVQLLFDRHQIIYAEG IAAETLLVDPRTSAALPADLKEALSRQIAGQNAPSHLQFEVGQALLNHPNAADILKRA STR" gene complement(1472220..1472293) /locus_tag="RTM1035_t07502" tRNA complement(1472220..1472293) /locus_tag="RTM1035_t07502" /product="tRNA-Arg" gene complement(1472336..1473112) /gene="truA" /locus_tag="RTM1035_07183" CDS complement(1472336..1473112) /gene="truA" /locus_tag="RTM1035_07183" /EC_number="5.4.99.12" /note="COG0101 Pseudouridylate synthase" /codon_start=1 /transl_table=11 /product="tRNA pseudouridine synthase A" /protein_id="jcventer:1101493006648_RTM1035_07183" /db_xref="CDD:30020" /translation="MPRYALRIEYDGAPFAGWQRQVDHPSVQGAVEAALARIEPGSHT IAAAGRTDAGVHAIAQVAHCDLTREWGTFRLSEALNYHLKPLPVAITACVRVAEDWHA RFSANERRYLFRVMSRRAPVTLDRGRVWHVRPKLDIDAMRAGAQHLIGMHDFTTFRST ICQAASPIKTLDAIEISEHESAMGPEIHFRLRARSFLHNQVRSIVGTLERVGAGSWHP DEVRAALNARDRAACGPVCPPHGLYLAGVSYPQDPFAAQD" gene complement(1473200..1474687) /locus_tag="RTM1035_07188" CDS complement(1473200..1474687) /locus_tag="RTM1035_07188" /EC_number="3.6.1.-" /note="COG0305 Replicative DNA helicase" /codon_start=1 /transl_table=11 /product="replicative DNA helicase" /protein_id="jcventer:1101493006648_RTM1035_07188" /db_xref="CDD:30653" /translation="MNEISAFNPTGAEIQSAESVPHSIEAEQQLLGAILTNNDVYDRI AAIIGPQHFYDPVHARIFETAAARIAKNNLASPVTLRAFLENDEGLKELGGPAYLAKL AGAAISTFAVRDYAQMIYDLAIRRALIALGHDIAGKAARVNVDSEPKDQIVEAEQKLY QLAEQGQSESGFQSFLKAVTDAVNVANAAYQREGGLAGISTGLVDLDGKLGGLHKSDL LILAGRPSMGKTSLATNIAFNVAKAYRRGTLPDGSEGAVDGGVVGFFSLEMSAEQLAG RVLAEASEISSHKIRQGDMDESEFRRFVEAAKTLESCPLYIDDTAAIPISQLAARARR LKRTHGLDLLIVDYLQLVRGSSDNRVQEIGEISMGLKAIAKELNIPVVALSQLSRQVE SREDKRPQLSDLRESGSIEQDADVVMFVFREEYYKEREKPGDHEMDKMAEWQEAMSRL HGKAEVIIGKQRHGPIGTVELSFEAQFTRFGNLVKPWQQGGNADY" gene complement(1474937..1475614) /gene="pyrE" /locus_tag="RTM1035_07193" CDS complement(1474937..1475614) /gene="pyrE" /locus_tag="RTM1035_07193" /EC_number="2.4.2.10" /note="COG0461 Orotate phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="orotate phosphoribosyltransferase" /protein_id="jcventer:1101493006648_RTM1035_07193" /db_xref="CDD:30809" /translation="MIPTTYPPKDEIARLTARMLLEIGAVHFNADTPFTLASGLPSPT YIDCRKLISYPRIRSTLMDFLSITVMREAGFEAFDNIAGGETAGIPFAALVAERMALP MTYVRKKPKGYGRNARIEGAMTEGQRVLLVEDLTTDGGSKLSFVDAIRETGATCGHTA VIFYYGIFPETEKTLGDHGVALHHLCTWWDVLAEARTQAIFETATLDAVEDFLRDPRK WQAAHKK" gene complement(1476168..1477427) /locus_tag="RTM1035_07198" CDS complement(1476168..1477427) /locus_tag="RTM1035_07198" /note="COG5323 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="Putative large terminase" /protein_id="jcventer:1101493006648_RTM1035_07198" /translation="MALPYLFEFWALPHQLPPSGDWRTWVIMGGRGAGKTRAGAEWVR SEVEGARPMDSGRCKRIALVGETIDQVREVMIFGESGILACSPPDRRPEWQATRKRLI WPNGAVAQAFSAHDPEGLRGPQFDGAWVDELAKWKRARETWDMLQFGLRLGEAPRVCV TTTPRNVGVLKDILATPSTVTSSAPTEANRAHLAESFLDEVRARYAGTRLGRQELDGL LIDEAEDALWSPAMLEAARVDTLPEFDRVVVAVDPPVSGHAASDECGIIVVGAITRGP VQDWRAYVLADASVSAASPARWARAVIRARELWGAERVVAEVNQGGDLVEQVIRQVDP LVPLRKVHASRGKVARAEPVAALYEQGRVHHARGLGTLEDQMCAMTARGYEGRGSPDR VDALVWALTDLIVEPASKWVRPRVRGV" gene complement(1477438..1477788) /locus_tag="RTM1035_07203" CDS complement(1477438..1477788) /locus_tag="RTM1035_07203" /note="COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07203" /translation="MVLITPDEGPTGLTTSINALEQQLADMRVDLAEIYQRIRAGDLD ELKNATKATAEIRQWLKIALEAEAQLERRRKEDLGIVHGYALDFDDARHQIGCRLDRL KRASCPGRLSRCPE" gene complement(1478007..1478798) /locus_tag="RTM1035_07208" CDS complement(1478007..1478798) /locus_tag="RTM1035_07208" /note="COG0159 Tryptophan synthase alpha chain" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit alpha" /protein_id="jcventer:1101493006648_RTM1035_07208" /db_xref="CDD:30508" /translation="MTRIDAKFAELKAAGKKAFVSYIMAGDPDYDTSLAVMQGLPAAG VDIIELGVPFTDPMADGPTIQLAGQRALAAGMTLEKTLAMAREFRKGDDSTPIVLMGY YNPIYNRGVDKFLTDAKAAGIDGLIVVDLPPEEDDELCIPASKAGMNFIRLATPTTDD KRLPKVLENTSGFVYYVSITGITGAAAAEAADVAPEVARIKAQTDLPVIVGFGIRTPE TAQTIASVADGCVVGSAIVGEIAKGKAVTEVLAFVKGLADGAHRA" gene 1478925..1480022 /locus_tag="RTM1035_07213" CDS 1478925..1480022 /locus_tag="RTM1035_07213" /note="COG0012 Predicted GTPase, probable translation factor" /codon_start=1 /transl_table=11 /product="translation-associated GTPase" /protein_id="jcventer:1101493006648_RTM1035_07213" /db_xref="CDD:30362" /translation="MGFKMGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGE VAVPDARLDKLAQIAGSKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRETDAIA HVLRCFEDGDVTHVEGRVDPVADADTIETELMLSDLESVEKRRAGLQRKLKGGDKEAA QAERLLAAAQAALEEGRPARTVEVDAEDIKAWKMLQLLTAKPVLYVCNVDEGNAATGN THSEAVAKMAAEQGAASVVISAQIEEEISKLEPEEAEMFLTEMGLEEAGLDRLIRAGY GLLHLETYFTVGPKEARAWTIPAGTPAPKAAGVIHGDFERGFIRAETIAYDDFVTLGG EQKAKDAGKMRSEGKSYVVKDGDVLHFLFNT" gene complement(1480041..1481192) /locus_tag="RTM1035_07218" CDS complement(1480041..1481192) /locus_tag="RTM1035_07218" /note="COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain" /codon_start=1 /transl_table=11 /product="tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase" /protein_id="jcventer:1101493006648_RTM1035_07218" /db_xref="CDD:30185" /translation="MALDINKPLNSLGFPKSPAETRVVVAMSGGVDSSVVAAHLAAEG YDVVGVTLQLYDHGAALAKKGACCAGVDIHDARRVAEEMGFPHYVLDYENIFRDAVID EFADSYLAGATPVPCIRCNERVKFKDLLETARDLEADCMATGHYIQRKMGVQGPELHS ATDSARDQSYFLFSTTPEQLEFLRFPLGHLPSKQATRELAAQYGLQVADKPDSQDICF VPNGNYASVIEKLRPGAAEPGEIVHADGRILGTHEGVIHYTIGQRRGLGIGGLEEPLY VVRLDVDTRRVIVGPKDMLSTRTVPLREINWLGDAPLTSQAEWHISVKVRSTRPPREA VLRPISATEATVELLTPEEGVSPGQACVFYETTGTRVLGGGWIWRGATV" gene 1481316..1481588 /locus_tag="RTM1035_07223" CDS 1481316..1481588 /locus_tag="RTM1035_07223" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07223" /translation="MYLKKVEGPRAVTLADGTVFSRADLPPADTARWVASRKLAVVRG VAYGLISRREALETYGLSEEEFDGWIAAVAKHGEGALKVTALGVYR" gene 1481690..1482406 /locus_tag="RTM1035_07228" CDS 1481690..1482406 /locus_tag="RTM1035_07228" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, winged helix family protein" /protein_id="jcventer:1101493006648_RTM1035_07228" /db_xref="CDD:31088" /translation="MRVLLVEDDPTTSKSIELMLTHANLNVYTTDLGEEGIDLAKLYD YDLILLDLGLPDMNGHEVLRQLRLARIATPILILSGADDTESKIKGFGFGADDYLTKP FHRDELVARIHAIIRRSKGHSQSVIRTGKINVNLDAKTVDAGGKPVHLTGKEYQMLEL LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLCEATDGVNYIETVWGRG YVLRDPEQATLGGRPLAIGA" gene 1482477..1484630 /locus_tag="RTM1035_07233" CDS 1482477..1484630 /locus_tag="RTM1035_07233" /note="COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)" /codon_start=1 /transl_table=11 /product="DNA ligase, NAD-dependent" /protein_id="jcventer:1101493006648_RTM1035_07233" /db_xref="CDD:30621" /translation="MAAASRISEGPMTDKLAVEDLTESEAQAELGRLAALLAAANRAY HTEDAPEITDAAYDALKARNAAIEARFPTLKRDDSASDQVGAAPLDGFAKVAHSIRML SLGNAFEPEDVAEFDSRIRRYLGLPDDAPLAYTAEPKIDGLSLSLRYVQGRLVQAATR GDGEVGENVTANARTITDIPESLTGAPEILEVRGEVYMSHADFAALNARQAEKSDKQF ANPRNAAAGSLRQLDAKITAARPLRFFAYSWGEVSAPLAETQMGAIARLKALGFQTNP LTVLCDGVEALLEHYARIEQARATLGYDIDGVVYKVDDLGLQARLGFRSTTPRWAIAH KFPAELAWTRLEAIDIQVGRTGALSPVARLTPVTVGGVVVSNATLHNEDYIAGRDSKG EVIRGGKDIRVGDWVQVYRAGDVIPKVADVDLSKRAEGATPYVFPATCPECGSDAVRE EGDAVRRCVGGLICPAQAVEKLKHFVSRAAFDIEGLGAKQVEQFYRDGWIKEPADIFL LQERYGSGLQQLKNREGWGEKSAKNLFEAIEEKRKIPFGRLLFALGIRHVGEQASTLI ARNYGTWDEFIAAMDGAKDYEGPEWERLLGIDGVGTVMARALVGAFAEPHERGSIDRL TEYLTVQEAARPRTDGSPVAGKTVVFTGSLEKMTRAEAKARAEGLGAKVAGSVSAKTD LLVAGPGAGSKAKKAQDLGIETIDEDGWLTLIGDA" gene 1484627..1486717 /locus_tag="RTM1035_07238" CDS 1484627..1486717 /locus_tag="RTM1035_07238" /note="COG1200 RecG-like helicase" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecG" /protein_id="jcventer:1101493006648_RTM1035_07238" /db_xref="CDD:31393" /translation="MSGRPEILFPLFAGLETLEGIGPKTAQALAALEITRPRDLILTL PHSGVDRRRRATVQGAEMPGIVTVEVTVGQHRPPSRKGGPYRVVVEDAATSFHLVFFH ARDEYLRKMLPTGARRIVSGKAELFDGIAQIVHPDHMLPLEEASDIPDFEPVYPLTAG VTQRVMTKGVHSALMRLPDLTEWIDPVQKAQAGWPDWAAAVRAAHRPQEARDLSPAHP ARERLAYDELMAHQMTLALARSKLRRAKGRATVGTGVLQARVLMALPYALTGAQTRAI AEIAADMAAPQRMNRLLQGDVGAGKTLVAFKALLIAVEAGGQGVMMAPTEILARQHLQ GLRPLAESAGVVLEILTGRDKGTERRAKLAALARGDIQILVGTHAVFQKDVEFSDLRL AIVDEQHRFGVRQRLELGKKGAQADVLVMTATPIPRSLALAQYGDMDVSVLDEKPPGR QPIKTALISMGRIDEVVDHLRRALAEGRQAYWVCPLVEESEVVDLSSAEERFKRLRAA LGEGVVGLVHGQMPPEDKDAAMAAFQRGDTSVLVSTTVIEVGVDVPNASIMVIERAES FGLAQLHQLRGRVGRGQAASTCLLMYQAPLSESGERRLTTMRDTEDGFRISEVDLEMR GAGDLIGTAQSGLPRFRIADLESQSALMAVAQSDARKLLHDDPDLVSERGRAARVLLW LMEQDQAIRLISVG" gene 1486815..1486937 /locus_tag="RTM1035_07243" CDS 1486815..1486937 /locus_tag="RTM1035_07243" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07243" /translation="MLHQIKTTATRAQDTIVGDAVGALALMVTLVGALYLPGFL" gene complement(1487128..1488345) /locus_tag="RTM1035_07248" CDS complement(1487128..1488345) /locus_tag="RTM1035_07248" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="putative Chemotactic transducer" /protein_id="jcventer:1101493006648_RTM1035_07248" /db_xref="CDD:31182" /translation="MTGQKLDQNSPLIGRFDQSFLIHMIRDFFIILLMVTVLEFALKA GMVYYKFRVHGATDATEAAQDLADNVRSIMRNEGGPVAARTVYPILQDNWDGLGYRIA IIPSDVTIRSIEQGFDFTPEGLPRGDWPDTAHASATLPITAEPFCLACHSEAQVGDVL GEVTVRRDLATDFAQWIEDMRLTGLLALAKIVLHSVLLFLILRARLEPLLGLRTVVSN LARAYGGLNHRAEIRSADEFGVLARDLNLFLDRITRLMGELDEVLQRVVTVNDDIVTI QADLRDRIDTLTGRIRRLERAAMLSAKSEPRLSKAWFDTARRAVSDLRSQTPEDAGAL IEDLRAVVANAEAQIAGSEALFADLGALGDESERLRHVMSEMIRLEERMKGIVDTGSV LVQRLRPGPVPSE" gene complement(1488444..1488926) /locus_tag="RTM1035_07253" CDS complement(1488444..1488926) /locus_tag="RTM1035_07253" /note="COG0822 NifU homolog involved in Fe-S cluster formation" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07253" /db_xref="CDD:31164" /translation="MGQHTKGKAMSGETDLIKLYSARILELAADIPHHGRLASPQASV KRRAPLCGSTVTVDIRCEGGRITDYAAEVKACALGQAAASVVGRAIIGCDLAQVTAAR DALREMLKSDGPTPPAPFDGLEVLRPARDYKNRHASILLTIEAAVEAMETVRAQTSCA " gene 1488967..1489335 /locus_tag="RTM1035_07258" CDS 1488967..1489335 /locus_tag="RTM1035_07258" /note="COG0139 Phosphoribosyl-AMP cyclohydrolase" /codon_start=1 /transl_table=11 /product="phosphoribosyl-AMP cyclohydrolase" /protein_id="jcventer:1101493006648_RTM1035_07258" /db_xref="CDD:41548" /translation="MPFDPATLKYDANGLIPAIAQEAETGEVLMMAWMNAESVARTLD TGRVTYWSRSRQAFWIKGETSGHVQELVEMRVDCDRDCLLVQVRQSGPACHTNRRSCF YTAVRAGEETEIMAPMAPLD" gene complement(1489358..1490191) /locus_tag="RTM1035_07263" CDS complement(1489358..1490191) /locus_tag="RTM1035_07263" /note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase, class Ic" /protein_id="jcventer:1101493006648_RTM1035_07263" /db_xref="CDD:30358" /translation="MFITRFAPSPTGPLHLGHAYSALLAHDRARAEGGTFLLRIDDLD HSRCRPEWEAQIFDDLTWLGLDWPRPVLRQSTHLSRYRAALNILWDQGLLYHCSCSRA DIRAAASAPQEGAPLLGPDGVIYPGTCRPTAPPNGPMPEGCALRLDMARACATLNTRL IYREKDELVAPHDLPHTVGDVVLARREMGASYHLSVVVDDADQGITHVIRGEDLQEAT QIHVLLQHLLGLPTPAYHHHALIRDDAGKRLAKRDDARAIATYRAQGASPQDIRAMVG L" gene complement(1490204..1491580) /locus_tag="RTM1035_07268" CDS complement(1490204..1491580) /locus_tag="RTM1035_07268" /note="COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation" /codon_start=1 /transl_table=11 /product="glucose-inhibited division protein A" /protein_id="jcventer:1101493006648_RTM1035_07268" /db_xref="CDD:31399" /translation="MDNVLHIIGGGMAGSEAAWQAANMGVHVVIHEMRPSVKTFAHRT GDLAEMVCSNSFRSDDDEQNAVGLLHWEMRAANGLIMAMAHENRLPAGGALAVDRDRF AQSVTARLLDHPNITVQHDEITQLPDSGHWIIATGPLTSEGLGQAIAAETGTEALAFF DAIAPIVYHDSIDMSRAWMQSRYDKGETEAERTAYLNCPMDRDQYEAFIDALLAADKT EFHEGEAESSPNPTPYFDGCLPIEVMAERGRETLRHGPMKPVGLTNPHAPDVKPHAVV QLRRDNALGTLYNIVGFQTKMKYGAQATVFKMIPGLENAQFARLGGIHRNTFLNSPTL LDAQMRLRSRPHIRFSGQITGVEGYVESAAMGLLAGRLAAAEILGQSLPPVPQDSAMG ALIHHITGGAEAKTFQPMNVNFGLFRPIDGFKGGRRGRIDRYKGYTDRAKAAWGEWLA AQNMSIAS" gene complement(1491623..1492408) /locus_tag="RTM1035_07273" CDS complement(1491623..1492408) /locus_tag="RTM1035_07273" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="jcventer:1101493006648_RTM1035_07273" /db_xref="CDD:31227" /translation="MAILDRTDQGAIARLTLNSPGNLNALSDAMLAALQSEFDRLAQD RHIRVITLMGAGKAFCAGHDLKEMTAGRQAEDGGRAYFADLFARCAQMMTTILTLPQP VIAAPHGIATAAGCQLVASCDMAVAAHGTRFGVNGVNIGLFCSTPMVALSRNIPRKQA FEMLTTGQFIDTARAAELGLINRAVPPEDLESETMALAETVASKLGSAVRIGKRAFYD QLDMGLEAAYAHTGAVMVENMLDRDTAEGIAAFIDKRAPDWDQ" gene 1492467..1492886 /locus_tag="RTM1035_07278" CDS 1492467..1492886 /locus_tag="RTM1035_07278" /note="COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism" /codon_start=1 /transl_table=11 /product="Phenylacetic acid degradation-related protein" /protein_id="jcventer:1101493006648_RTM1035_07278" /db_xref="CDD:32233" /translation="MSVKMTAADLMSFLDREFPQVSGEFAIEEVGEMHIRTRLLVGER HLRPGGTVSGPSIFALADVSVYLGILAMIGPEGLAVTTNCSIDFMRKPMAGVDLIAEC RLLKLGRVLAVGDVLIYSEGMSAPVARASLTYSIPPK" gene 1493133..1493597 /gene="rplM" /locus_tag="RTM1035_07283" CDS 1493133..1493597 /gene="rplM" /locus_tag="RTM1035_07283" /note="COG0102 Ribosomal protein L13" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L13" /protein_id="jcventer:1101493006648_RTM1035_07283" /db_xref="CDD:40658" /translation="MKTFSATPADIDKKWILIDAEGVVLGRLASIIAMRLRGKHKASF TPHMDMGDNVIVINADKVQLTGNKRNKPNYWHTGHPGGIKSRTTGEILEGKYPERVVM QAVKRMLPGNRLSRTQMTNLRVYAGGEHPHEAQSPEVLDVKSMNSKNTRVAH" gene 1493597..1494088 /gene="rps9p" /locus_tag="RTM1035_07288" CDS 1493597..1494088 /gene="rps9p" /locus_tag="RTM1035_07288" /note="COG0103 Ribosomal protein S9" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S9P" /protein_id="jcventer:1101493006648_RTM1035_07288" /db_xref="CDD:40473" /translation="MADEIKSLEGLEAVAGGVSAAAVAIKAPREPERDALGRSYATGK RKDAVARVWIKPGSGKVVVNGKPMNEYFARPVLQMILKQPFTISGTEGQFDVMATVAG GGLSGQAGAVKHGVSKALQLYDPSLRGALKAAGFLTRDSRVVERKKYGKRKARRSFQF SKR" gene complement(1494155..1494532) /locus_tag="RTM1035_07293" CDS complement(1494155..1494532) /locus_tag="RTM1035_07293" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07293" /translation="MSAITTWPAQAESWLDRQGKPAWIIAMVLGLIVFWPLGLALLAY MIWSNRMTVRSLPSRFHRQNATRSTGNAAFDAYKADTLRRLEEEQEQFEAFLQRLRDA RDKAEFDQFIDERRKPTQAQTTA" gene complement(1494624..1495247) /locus_tag="RTM1035_07298" CDS complement(1494624..1495247) /locus_tag="RTM1035_07298" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family protein" /protein_id="jcventer:1101493006648_RTM1035_07298" /db_xref="CDD:31500" /translation="MGKQGYHHGNLRQALVEATLTLIAEKGPQGFTMAEAAKLAGVST AAPYRHFSGREALIAEAARQGFEIFVTRMEAAFNDARPNPLTAFMATGRAYLAFARSN AGHYVAMFESGLSVNSNPELADAAARAQAILTRAAAALSAHLPPDRRPPAAMFAAHVW AMSHGVVELYARGTPGARAPFPPEDLLESGISVYLRGLGLIPPDSTP" gene complement(1495240..1496109) /locus_tag="RTM1035_07303" CDS complement(1495240..1496109) /locus_tag="RTM1035_07303" /note="COG2326 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07303" /db_xref="CDD:43893" /translation="MDLPFDGAISAFFETEAPEAIRKEIRRADKDDILGADFPYSEGL SKKTYEKDIEKLQIELVKLQHWAKESGARIAIVFEGRDAAGKGGTIKRFREYLNPRGA RVVALSKPSDVEATQWYFQRYIDYLPAGGEIVFYDRSWYNRAVVEKVFGFCTDAQREH FFAQVPDFERMIVDEGIHLFKVWLNVGRAEQLRRFLDREQDPLKQWKLSWIDVEGLKK WDSYTAAIAETLTRSHSDHAPWTVVRSDDKRRARIETIRHVLSQLDYARKDARAVGSA DPGIVGGPEIWHG" gene complement(1496146..1497114) /locus_tag="RTM1035_07308" CDS complement(1496146..1497114) /locus_tag="RTM1035_07308" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase" /protein_id="jcventer:1101493006648_RTM1035_07308" /db_xref="CDD:30941" /translation="MPLAVKSLILVAVCLVAFWGWTQQRARTHEARAEASFPPEGQII DVSGHRVHAVVMGNGPDLVLIHGASGNTRDLTFELAPRLAERYRVIVIDRPGLGYTAR INRTGATITQQAALLQEAAAQLGADKPIVLGHSYGGAVALAWAVTRPDHIAALVDVAG AAKPWDTGLSTYYRVLSHPVLGPLVIPLLTAFVHDTRVEQAVREIFTPQEPPEGYLEH IGAGLTLRRHSLRANALQRANLLAEIEALHTLYGTITVPVEIVHGTADTTVGVSIHSE PLAAQIPGAHLAVLDGVGHMPHHSDPEAVIAAIDRAATRAGLRPVD" gene complement(1497098..1498021) /locus_tag="RTM1035_07313" CDS complement(1497098..1498021) /locus_tag="RTM1035_07313" /EC_number="2.3.1.46" /note="COG1897 Homoserine trans-succinylase" /codon_start=1 /transl_table=11 /product="homoserine O-succinyltransferase" /protein_id="jcventer:1101493006648_RTM1035_07313" /db_xref="CDD:32081" /translation="MPIKIPADLPAYDVLTREGVMVVDPDQAARQDIRPLRIGLLNLM PKKIQTENQFARLIGATPLQIDFDLIRMSEHQTKNTAAEHMESFYRPFEEVAASGDKY DGLIITGAPIEHLDFDAVTYWAELARVFDWTQTHVHSTFGVCWGGMAMINHFHGVQKH MLPAKAFGCFRHRNMVPASPYLRGFSDDCVIPVSRWTEMKRAEIEAVEGLTILLDSDD VGPCLVEDTARRALYIFNHFEYDSDTLKQEYDRDIANGTPINVPCNYYPGDDPSRPPQ NRWRSHAHLLYGNWVNQIYQTTPFDMNAIGC" gene complement(1498049..1498921) /locus_tag="RTM1035_07318" CDS complement(1498049..1498921) /locus_tag="RTM1035_07318" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07318" /translation="MIYTSAQDWREATHKRVLFYGMSGLGKTHVSNTLRDAGNWFHYS IDYRIGTRYMGELIADNAKAHAMQVPFLRDLLLSDSIYIGSNITFHNLTPVSTYLGKP GNPAKGGLPIEEYRIRQEQFRQAEIHALMDTAYFIRRADALYGYPHFICDTGGSICEW VDGDDPEDTILKELSAHCLLIYIEGSEAHTAELIRRFDRAPKPMAYQPAFLDAAWAEY LKENNCEEDEVDPDSFIRWTYARALAHRQPRYEAMVKWGVSVTANEVATVKTAQEFEA LIATALERRAATPI" gene complement(1499035..1500153) /locus_tag="RTM1035_07323" CDS complement(1499035..1500153) /locus_tag="RTM1035_07323" /note="COG2067 Long-chain fatty acid transport protein" /codon_start=1 /transl_table=11 /product="putative outer membrane protein" /protein_id="jcventer:1101493006648_RTM1035_07323" /db_xref="CDD:32250" /translation="MKKTWLAATVIAATASSAFGGEIERRGDPSMILFEKGKNYLEFS AATVDPSVSGVARPGVPTAPTGNIQNRYQSFAGGYKHELNDRVALAFVIDEPVGASVN YRTPPAALGGAFFGGSSAEVSSVAFTALAKYKATDRFSIYGGLRYVGLSGNITVISPA TLGSAVPAPNSPYTLGVNKDFQVGYLLGAAYEIPDIALRVALTYESKTEHDFKDNTGA GFKVEIPQAFTLHAQSGIAKDTLLFGSVKWREWSKFAVQPGDFFSVATGVPVNVPIAS GPSDIWTYELGIGRRFNENWSGAVLLGYEKDEGDVVGNLSGKDGYFSYGLAATYETEA WEITAGIKYFDVGDANSNVTAFSGSDAIAIGTKVAFRF" gene complement(1500291..1501178) /locus_tag="RTM1035_07328" CDS complement(1500291..1501178) /locus_tag="RTM1035_07328" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07328" /db_xref="CDD:40969" /translation="MSLAAPAPAPQTLRAGLWMLGAVASFSSMAVAGRAVSFELDTFE IMMYRSIVGFILVLSVARLTGQIATVTTRSPGTHLVRNLCHFTGQNLWFYAITVIPLA QVFALEFTAPLWVLILSPLVLGERLTGTRALAAVIGFAGILIVARPSPETINLGTIAA AAAAIGFAGSILMTKRLTRTESLTCILFWMTLLQIGFGLACAGYDGDIALPSLTSAPW LVLIGCAGLLAHFCLTTALSLAPATLVTPVDFLRLPVIAIVGLLVYGEAVDVFVLVGA AVIFGANYLNLWRETRKSV" gene complement(1501175..1501441) /locus_tag="RTM1035_07333" CDS complement(1501175..1501441) /locus_tag="RTM1035_07333" /note="COG1359 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07333" /db_xref="CDD:31550" /translation="MISLTGQMICPSEDLEVTRAALTEHIRLSRAEQGCLSFDVTETA PGEFSVSERFVDRAAFDAHQTRTRASEWWRVTSHMPRHFEITEE" gene complement(1501438..1503006) /gene="guaA" /locus_tag="RTM1035_07338" CDS complement(1501438..1503006) /gene="guaA" /locus_tag="RTM1035_07338" /EC_number="6.3.5.2" /note="COG0518 GMP synthase - Glutamine amidotransferase domain" /codon_start=1 /transl_table=11 /product="bifunctional GMP synthase/glutamine amidotransferase protein" /protein_id="jcventer:1101493006648_RTM1035_07338" /db_xref="CDD:30865" /translation="MSQISHDRLLIIDFGSQVTQLIARRLRELNVYCEIHPYQKVTDA FLQEMAPRAIIFSGGPDSVMREGSPRPPQAAYDLGVPILGICYGQQVMMQDLGGRVEA GEHATAEFGRAYVTSTGVASGFVDGWFAGDSREQVWMSHGDHVSEIAPGFEVLGTSPG APFAITADRARNFYAVQFHPEVHHTPNGARLYENFIRQAGFKGDWTMGAYREEAIAKI RAQVGDKQVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLLRQGEADEVVAMFRD NYNIPLIHADEAELFLGELEGVSDPETKRKTIGRLFIDVFQKYASQIEGAEFLAQGTL YPDVIESVSFSGGPSVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGRELGLPQ SFIGRHPFPGPGLAIRCPGEITREKLDILRKADTVYIDQIRRHGLYDDIWQAFVAILP VRTVGVMGDGRTYDFACALRAVTSVDGMTADYYPFTHEFLGETATRIINEVKGINRVT YDITSKPPGTIEWE" gene complement(1503059..1504276) /locus_tag="RTM1035_07343" CDS complement(1503059..1504276) /locus_tag="RTM1035_07343" /note="COG2067 Long-chain fatty acid transport protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07343" /db_xref="CDD:43275" /translation="MSALALAGPATATNGYFSNGYGGQSKGMAGAGVAVPTGVLGMAQ NPATGVKLGNQAGLCLTTFAPNRDVEIAPGGPLTPGTHKSQNDVFFIPCGGANWKLDD RSSLGAFVFGNGGMNTEFDTNFFAGLGAGSAPVGVNLEQAFITLNYARKVNDRLTLGV SPILAVQRFKAQGLQAFSALSISPGDVTNRGHDWSTGFGVNLGLLYEANPEWTFGAAY RNEIQMSKFSRYKGLFADGEFDVPAMLTLGAAYTPAAAPQWTLTGEYQRIFYGNVKSI ANSSAPPGGPLGASNGVGFGWQDVDVWRLAAIWQKSDKLTLRTGVSYSTEFIKNDGNV VINTIAPGTPQWHLSAGGTYEINDRWAFTFAYTHAFSNSFSGSNPALTGVAQPVKIRM HQHEIATGISYRW" gene 1504621..1506168 /locus_tag="RTM1035_07348" CDS 1504621..1506168 /locus_tag="RTM1035_07348" /note="COG5598 Trimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase" /protein_id="jcventer:1101493006648_RTM1035_07348" /db_xref="CDD:46144" /translation="MSEAALSSRRSRGGGGAARRAERTAVSIETARYIERNIPNFEVL TEEALEIIEANAETVLAEVGVNFVQNPAALERWRQAGADVQGERVRIPRGLARQLCAT APSRIIQHARNPERTVEIGGKSLVLAPVYGPPFVRDMEGGRRYATMEDFRKFVKLGYM SKWLHHSGGTVCEPTDIPVNKRHLDMLLAHMTLSDKPFMGSVTEPSRAQDSVDMCNIL FGEEFVQNNTVMTSLINVNSPMTFDDVMMGSLEIYAANNQACILSPFIVGGAMAPVSV AGTLTQVLAEVLAGIAYSQLVRPGAPMIFGAFVTSIDMNSGAPTFGTPEAAHITYGAG QLARRMGLPFRSSGSFNGSKLPDAQAAYETANSLNVGLLAGVNFMLHSCGWLEGGLVS SFEKFVMDADQLGTLHHLARGVQVDEEAQAMDAIREVGPGGHYLGCAHTQANFKSAFW RSDLFDYKPFETWADEGERDTMVLANARVHKLLADYQQPPLDPEIAEALAAYVAKRKA EMPDAFS" gene complement(1506229..1506474) /locus_tag="RTM1035_07353" CDS complement(1506229..1506474) /locus_tag="RTM1035_07353" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07353" /translation="MIRAARIGLQDYRREVHLRRLLRDGPLPQSPTALVRLLETEAAL DQERRLASTGYSPARHVEVLIAMMAEARDITPSLLET" gene 1506710..1507876 /locus_tag="RTM1035_07358" CDS 1506710..1507876 /locus_tag="RTM1035_07358" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07358" /translation="MPGCDLVPEGRKFGGRAMHEGYAFKTILHDVPSWVPEAALHYLA HTESGTPIRALARHAGRHASTVMRQIRAYETRRDDLLVDEALRRLGQRVNHDKISGSP AKEAAMTSHTITRHNQTPELTENRLKSEARRVLRRLCEPGALLAVSADMDKAVVVRDT GSGQTLRTAVVEREVAEAMALKGWVACDGPGRIARYHITATGRNALSLMLAEAENQAS GLRDGPFLSEQAASHPTPDASGRRARYGLVDSPLVALARRRDKDGSRFLTSDLVRAGE RLREDFELAQMAPRVAQNWDHFLSHVDEHSSPVVSRGYDAEAARLRVLAALRDLGPGL GDVVLRCCCYMEGLERAEKKMGWSARSGKIVLRIALQRLKRHYEGLGEAGSLIG" gene 1507943..1508947 /locus_tag="RTM1035_07363" CDS 1507943..1508947 /locus_tag="RTM1035_07363" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006648_RTM1035_07363" /db_xref="CDD:30928" /translation="MDMNITLRQLGYFKALAEQRNFGRAAEVVNISQPALSVQIKEME TTLGQKLVERRARDVVLTPFGRLILAHALRVLDEMQALSEAARWQGGLAGRLSLGIIP TIAPYILPGVLEALRSRDISLDVQVREAKTDQLIADIQGGQLDAAILARPVGAEGLRE RLLFEDRFLLAGTSVRLAALGQGAEALRPTSLVHSPLLLLEEGHCLTDQALEVCGRGR GHAQIDMGASSLGTLSRLVAAGFGLTLMPEIAAATEVRAAPGINLRRFGPPEPARQIV LVRRQSTQDEVWFEKLAEVLETAGAALIALARAQVPEPTAAMRPAPHAAQVDIYRDTH " gene 1509070..1510014 /locus_tag="RTM1035_07368" CDS 1509070..1510014 /locus_tag="RTM1035_07368" /EC_number="2.8.1.-" /note="COG0320 Lipoate synthase" /codon_start=1 /transl_table=11 /product="lipoyl synthase" /protein_id="jcventer:1101493006648_RTM1035_07368" /db_xref="CDD:30668" /translation="MRDLKLPDQRHPEKAHRPDNAQPRKPDWIRVKAPTSKAYFETHR IMREHKLVTVCEEAGCPNAGECWSQGHATMMIMGEICTRGCTFCNVATGKPQTLDAFE PGRVADAVSKLGLKHVVVTSVDRDDLSDGGAEHFAQTIRAIRHRAPGTTIEILTPDFL HCEDGALETVVAAKPDVFNHNLETVPGLYPTVRPGARYFHSLRLLQRVKELDPTMFTK SGIMVGLGEDRQAVHQVMDDMRAAGIDFLTIGQYLQPTPKHHAVDRFVHPDEFAAYEK AAYGKGFLMVSASPLTRSSYHAGDDFARLQAARNAKFA" gene complement(1510110..1510679) /locus_tag="RTM1035_07373" CDS complement(1510110..1510679) /locus_tag="RTM1035_07373" /note="COG3108 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="Tat (twin-arginine translocation) pathway signal sequence domain protein" /protein_id="jcventer:1101493006648_RTM1035_07373" /db_xref="CDD:45843" /translation="MTEISSTGISRRGVLLAFAATAVAAAPTFSNAAGFLRGAGDIRR IRLVSPRTGERLDTIYWIEGDYLKEAVREISLFMRDWRTNQVKNIDIRTIDIMAASHN LLDVSEPYTLLSGYRSAQTNAMLRSRSNGVARNSLHMVGEAADLRLGSRSVSQIYRAG VACGGGGVGRYSGSNFVHMDCGPVRTWGR" gene 1511061..1512629 /locus_tag="RTM1035_07378" CDS 1511061..1512629 /locus_tag="RTM1035_07378" /note="COG2989 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="peptidoglycan binding protein, putative" /protein_id="jcventer:1101493006648_RTM1035_07378" /db_xref="CDD:32808" /translation="MLTAALVLFAWIMPAAAQEAAFRQAVAEAAAEDRDLAAFYQDQS YRPVWTGAGAEHLARRQALVQVLARAGVHGLPAERYDLDGLIASMTAARSQRDLGQVE VALSRTYLRYAHDVQSGVLVPSKVIGDIKREVVRQESGALLNEILAKEPSRVMRNLAP RSNEYARLLKQKLRLEQLVAEGGWGAAVSAEKLRPGDSGPAVIALRNRLIAMGYLDRS AAQTYDMRLQQAVQAFQGDHGLETDGIAGSTTLAAVNTPATERLKSVIVAMERERWLS EERGQRHILVNLTDFSARILDNDSVTFATRAVIGKNDQNRRSPEFSDEMEYMVINPTW HVPYSIAVNEYLPQMQRNPGAASHLKLYNRNGREVSRGAVNFGAYNARNFPFAIKQPP SERNALGLVKFMFPNKYNIYLHDTPQKALFDLEKRDFSHGCIRLHQPFDFAYALLGRQ ESDPKAFFHSVLGTGRETYVQLEQHVPVHIIYRTAFTQAQGRPQYRGDVYGRDARIWE ALEKAGVSLDTPRG" gene 1512834..1513109 /locus_tag="RTM1035_07383" CDS 1512834..1513109 /locus_tag="RTM1035_07383" /note="COG0236 Acyl carrier protein" /codon_start=1 /transl_table=11 /product="phosphopantetheine-binding protein" /protein_id="jcventer:1101493006648_RTM1035_07383" /db_xref="CDD:30585" /translation="MKDLAMSTIQDRVIAIIAEQAVLEPADVTLDSTPEDLGIDSLGL VESIFAIEEAFDISVPFNANNPSESDFDISTVRSIIAGIERLVAAQS" gene 1513106..1514317 /locus_tag="RTM1035_07388" CDS 1513106..1514317 /locus_tag="RTM1035_07388" /note="COG0304 3-oxoacyl-(acyl-carrier-protein) synthase" /codon_start=1 /transl_table=11 /product="beta-ketoacyl synthase" /protein_id="jcventer:1101493006648_RTM1035_07388" /db_xref="CDD:29421" /translation="MKRVVITGAGTINALGADVPSTLEAMREGRCGISDLEFQDVERL SIRIGGQVKNYDPEAQFNRQQLALYDRFTQFTLIAARQAMAQAGLEFSGELAARAGVI LGNSGGGMTTLDENYRSVYEEGKNRVHPFVVPKLMNNAAASHLSMEFNLKGPTFTVST ACASSNHAMAQAFQMVHGGITPVMVTGGSESMLCFGGVKAWEGLRVMSRDACRPFSAN RNGMVQGEGAAIFVFEEMEHAKRRGAEILAEVAGFAMTSDASDIVMPSKQGAARAITG ALNDARINREEVGYINAHGTGTAANDKTESAAVADVFGHHADRLMISSTKSMHAHLIG GTGAVELLACIMALRDGIIAPTIGYEEPDPECALDVVPNVAREARVNVALSNAFAFGG LNAVLALKRFA" gene complement(1514377..1514955) /locus_tag="RTM1035_07393" CDS complement(1514377..1514955) /locus_tag="RTM1035_07393" /codon_start=1 /transl_table=11 /product="invasion associated family protein" /protein_id="jcventer:1101493006648_RTM1035_07393" /translation="MGGALSAQEATQPAPEAPVEAAEPDAETPAIGLDTGRPVQEDPS YIKSTHDDWQIKCFRTGVEGQEDLCQMYQLMTESAGNPVAEFTIYRLPEGGPVIAGAT IAAPLGTLLTEEIKLSVDGANAKSYAYSFCTMAGCFARIGLTQQDIDTMKRGVKVTLE IVPAQAPDQKVKIDASLKGFTAAFEEASILQQ" gene 1515417..1516976 /locus_tag="RTM1035_07398" CDS 1515417..1516976 /locus_tag="RTM1035_07398" /note="COG0433 Predicted ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07398" /db_xref="CDD:45765" /translation="MQTSIFVGGGGADYSEPQELLLKYGNRHGLVAGATGTGKTVTLQ VLAEGFSDAGVPVILSDIKGDVSGMAVAGSPENKLHGPFTERAQKIGFDAFRYDTFPV IFWDLFGEQGHPVRTTLAEMGPLLLSRLMGLSDAQEGVLNIAFRVSDEEGLPLLDLKD LQALLTWVGQNSADLSLRYGNVGVSSVGAIQRALLVLENQGGAHFFGEPALALEDLMR VTPEGRGYVNILAADRLINSPRLYATFLLWLLSELFETLPEVGDVDKPKLVFFFDEAH LLFEDAPKALVDKVEQVARLIRSKGVGVYFITQNPDDVPEDILGQLGNRFQHALRAFT ARDQKALSRAAETYRPNPRFDTVEAIRDVGVGEAVTSMLQNKGVPGVVERTLVRPPAT QLGPCDAATRRAVIAGSPVAGKYETAIDRQSAHEILAARAAAAAKEAEDAEAKSAAEA AAEEAEAERAREFKAARRYSGGATSGQSRRAREPEGFGDALASAVMKELTGTTGRRIV RGILGGLFKGR" gene complement(1516987..1518039) /locus_tag="RTM1035_07403" CDS complement(1516987..1518039) /locus_tag="RTM1035_07403" /EC_number="4.3.1.12" /note="COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog" /codon_start=1 /transl_table=11 /product="ornithine cyclodeaminase" /protein_id="jcventer:1101493006648_RTM1035_07403" /db_xref="CDD:42400" /translation="MTLAPSHKALVPFVSVDNMMKLVHHIGIEPMLRGLADYIEADFR RWELFDKTPRIASHSEEGVIELMPTSDGEVYGFKYVNGHPKNTRQGLQTVTAFGLLAN VGNGYPVLLSEMTVLTALRTAATSAMVAKYLAPKGAHTMAMIGNGAQSEFQTLAMKAI CDLKSVRLYDIDPAATAKAARNLRGLGLEVVSCSTPEESMEGAQIITTCTADKQYATI LSDNMVGAGVHINAIGGDCPGKTELAPGVLQRSTIFVEYPEQTRIEGEIQQLSPDHPV TEMWQVINGTAKGRSHADEITLFDSVGFAIEDFSALRYVRDHIAGTDLFLDLDLLADP DDPRDLFGMLQRASTP" gene complement(1518050..1518979) /locus_tag="RTM1035_07408" CDS complement(1518050..1518979) /locus_tag="RTM1035_07408" /note="COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family" /codon_start=1 /transl_table=11 /product="arginase" /protein_id="jcventer:1101493006648_RTM1035_07408" /db_xref="CDD:40580" /translation="MTPQTILLIGAPVDSGKDRRGCLMGPDAYRTAGLAEALGDLGHG LRDLGNLCPAPATVDPALPAHLHAPAETAGWTATLMQAAEEAMQEGLPIFLGGDHSLS LGSVAGVANHAAAMRRPQFVLWLDAHSDFHTPQTTASGNLHGTPLGYVTGRAGFHGFP EVANPVPEENICILGLRSVDRAEREALQSSRIRYHDMRVIDEQGISRPLAAFLDRVAA AGGALHVSLDVDFIDPLFAPAVGTTVPGGVTIREAHLTMEMICDSGLMTSLDLVELNP FLDERGRTAQVMVDLAASALGRRVFDRPTQAYS" gene 1519098..1519526 /locus_tag="RTM1035_07413" CDS 1519098..1519526 /locus_tag="RTM1035_07413" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family protein" /protein_id="jcventer:1101493006648_RTM1035_07413" /db_xref="CDD:31711" /translation="MDDADQRLFSMLRHDARASLSDLAIGLGMSRTTVRARIERLRAS GAIVGFTVVLRGDAARDPVRGLMMLGIEGRGTDRILRQLNGLSAVRATHTTNGRWDVI VEIGTETLEELDKVLAQIRRFEGIAQSETSLLLNTWKSGA" gene complement(1519535..1519999) /locus_tag="RTM1035_07418" CDS complement(1519535..1519999) /locus_tag="RTM1035_07418" /note="COG1495 Disulfide bond formation protein DsbB" /codon_start=1 /transl_table=11 /product="Disulphide bond formation protein DsbB" /protein_id="jcventer:1101493006648_RTM1035_07418" /db_xref="CDD:31684" /translation="MQLSQKHLILLAAGGSAALMLGALGFQHLGGMAPCKLCIWQRWP HVIAIAFGAAALVALPRLLCLGGLLAALTTAGIGGYHTGVERGWWQGPTSCSSSGTDG ISADALFEQIMAAPLVRCDQVPWEMLGLSMASWNMLASLGLATLWLMALRKR" gene complement(1519999..1520577) /locus_tag="RTM1035_07423" CDS complement(1519999..1520577) /locus_tag="RTM1035_07423" /note="COG1238 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="DedA family protein" /protein_id="jcventer:1101493006648_RTM1035_07423" /db_xref="CDD:31431" /translation="MIRALYDWTIRMADHRHALWVLAAVSFVESSVFPIPPDVLMIPM ILARPSRAWLIALVALVSSVLGGLLGYAIGAFAFQEIGQPILAALGKGDAMTEFSTRF NDFGFWAVLTAGITPFPYKVITIMSGWTAMPLGVFIASSILARGIRFFLVAALLWKYG PSVRDFIERRLGLVTIVFVVLLFGGFYATRFF" gene 1520722..1520804 /locus_tag="RTM1035_t07500" tRNA 1520722..1520804 /locus_tag="RTM1035_t07500" /product="tRNA-Leu" gene complement(1520860..1522452) /locus_tag="RTM1035_07428" CDS complement(1520860..1522452) /locus_tag="RTM1035_07428" /note="COG0069 Glutamate synthase domain 2" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07428" /db_xref="CDD:28786" /translation="MRYIPWLISILLVPIGGAIAIWLPFWGGMLAGLAGLAATIGLYD VYQSKRAVLKNYPLSARLRFLFEHFRPEIRQYFLESDHDETPFSREQRALVYRRSKGI EGLRPFGTLRNVNAVGHEWINHSISPSHLGDIAFRQPIGGPDCTQPYDSSALNISGMS YGALSPTAIEALNWGAKLGGFAHTTGEGSISRFHRKHGGDLIWQIGSGYFGCRTATGA FDPEMFVTNASDPQVKMIEIKLSQGAKPGHGGILPGAKVTEAIAEARGVLVGQDCISP AAHSEFSSPDGLCRFIARLRHLSGGKPVGLKLCVGHPWEVFAMVKAFHETGITPDFIT IDGAEGGTGAAPVEFADHKGAPIREGLMLVHNSLVGMGLRDRVRLIASGKIISAFDMC RMFALGADGCNIARGFMFAVGCIQAQVCHSGKCPTGVTSQDPGRYRAIVVAEKHLRVA SYHRNTLFALKEAVESSGLQRPQEFTPHHLMIRVNSREVRSAASQYLWLEPGELLGGH VSHPAFAKYWDHARPDTFAFAP" gene complement(1522564..1526304) /locus_tag="RTM1035_07433" CDS complement(1522564..1526304) /locus_tag="RTM1035_07433" /note="COG2911 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07433" /db_xref="CDD:32735" /translation="MARLVLFLSLLLTTLATPLLAQTTDEDRGYLQALLEDNLSGAGR EVRITGFAGALSSQATIAELTIADRDGIWLTLRDVTLDWTRTALLRGRVEVNRLTARE ITVARAPIAEEPLSPDMAEATPFRLPELPVSVNIGEISAETLTLGAPLLGEEVALRLL GRLSLGSGEGAAEIEVTRLDGRGAVSLNASFVNATQVLALDLSLQEDAGGIAATLLQL PDRPALSLGISGTAPLNDYTADIRLASDGTPRLTGEVTIRDAEAEGVTSKAFGATISG DLTPLFAADYRPFFGTESALKLTGTRQPNGALDIADFTLSAAQVTLSGALSLDAAGWP QRFRLTGELGDGDSRVRLPISGPATHIRGATIDAAFDAARGDRWRTQLGLTGFERPDI GLATATLSGRGALERTAPRGVTALVEFDLAGLRVDDPALAEAVGTELSGLASLDFTED RPLVLRALRLVSGAAQLSGNGRIAALAEGFPVSGTATLEAPNLARFAALSGQSIAGAA KATIAGSGSLLGGDFDITLDAETDQLAVGIAQVDPLIASAGTLSMAARRDTTGIALDR LQIENDVIRATASGRLSGESGALSLAARLTDLALSDPRLSGPAEISSNVAWQTGGDVT LTGLDAALMGSRLRANATLSPEVEGLPLSGELRAEISDLARFSALAGLPLRGALDLTL DGKAKDRGQDVEISATLDGRNLGTGIADLDKLIAGQLSLRADVARRLDGIEIGTLRLE TPQLALSAGSPNPDAPVDFNIRLANLGLFAPDFAGPVTATGRATLSGALAERVAVTLS AEGPGGTTAQVSGDIVDHGARLDLSASGALPLALANSYIRPNAIQGTARYDLRINGAP ALPAVSGTISTSDTRIALPATGLTVETLSGTATLGQSRVQTDFTAQMRDGGQIRVTGP VGLTPGFTGDLSVGLDGLVLSDQLIYTTTVNGNIGVNGPLTGGARISGALTLEETNIR IPSGLGAASVSLPDLQHRNEPAAVRTTRERAGLIQTETAGRARPYALNLSINAPNRIF VRGRGLDAELGGSLRLAGTTDAVAPDGFFELIRGRIDILGQRLTMTEGRITMQGSLDP YLRFVATTDAGDVAVQVIVEGVASAPEVRFASDPDLPQEEVVSRLIFGRGLDNISAFQ AAQMASAVATLSGNSNGDVVGKLRGAIGLSDLDVTQTEDGGTEVSAGAYISDKVYTEV TADSEGKQRINLNFDLSDSVTLKGGASNDGSSGVGVFFERDY" gene complement(1526304..1528112) /locus_tag="RTM1035_07438" CDS complement(1526304..1528112) /locus_tag="RTM1035_07438" /note="COG0729 Outer membrane protein" /codon_start=1 /transl_table=11 /product="putative outer membrane protein" /protein_id="jcventer:1101493006648_RTM1035_07438" /db_xref="CDD:31073" /translation="MLKSSVRVASLAALCLWILPDLAQAAEVRLTAPDARDGFTDRLR SASLTITTAAQQEATAQDLLAAAQSDYGRLIGVLYAEGFYGGVIRILVDGQEAASIPP LRAPSDIRQIDITVERNAPFVFSTARVAPLAPKTKLPPEFVTGNRAKGDLIGDATRSS IAAWRTTGHAKALVSEQTIIADHAASTLSADIQLDPGPRLHFGELLLAEESRESRVRP DRIRDIAGLPTGRKFSPEELDNAATRLRRSGAFRSVVMIEADRPNPDGSLDITARVTD APPRRLGFGVELASLEGLTLSGFWLHRNLFGGAERLRLDAMIGGIGGDSGGEDYRLGA RYDRPATFHPDTGLFLEARIEGNDEPDYTESKVEIGGGFTRVFSDELRGEAGIAYRYS DIDDDLGRRELQHLLFPASLTWDKRDDALNATSGLFLEVSLTPFIGLDQRSGDGARIF ADARHYRSFGAGDRYTLAGRAQIGSVAGPSIGEIPADMLFYSGGAGTVRGQDYQSLGV DIAPGVRVGGRAFVGFSGEFRTSVTDKIQGVAFVDTGFVGQDALGTGRGDWHSGAGIG ARYFTPVGPIRVDIATPLGDRAGEDLELYIGIGQAF" gene complement(1528219..1531317) /locus_tag="RTM1035_07443" CDS complement(1528219..1531317) /locus_tag="RTM1035_07443" /note="COG0841 Cation/multidrug efflux pump" /codon_start=1 /transl_table=11 /product="Acriflavin resistance protein" /protein_id="jcventer:1101493006648_RTM1035_07443" /db_xref="CDD:31183" /translation="MTLSDISIRRPVLAAVASLLIVIFGVAALRSIPVRELPDVDNAV VTVTTTYRGAAPEVIDTDITETVEGAIASISGIRTISSESRQGRSRVTIEFETSVDID VAANDVRDAVGRVRGDLPEEADEPQVVKSDADADPVMRVAVTSDRMTTAEITDYIDRF VVDRFSTLDGVANVDVIGAQPFAVRIWIDRRALAARNLTVSDVEAALLRNNLELPAGE VESINRQMTVRLNSRLRSIEDFRDIVIDRVAGYPVRLGDVARVVPGVADDSTIVRTNG TEAVGMWILRQSQSNTLEISNAVRAEIKTLEPNLPEGMKIIVGSDDALFVGASIREVV IALFISLALVVAVILLFLRSIRATLVPFITIPVSLIGSFLLIGMWGFSLNTLTLLALL LAIGLVVDDAIVVLENIQRRIEDGESPLVASVHGARQVTFAVIATSITLIAVFVPLSF MPGQVGRLFVEFGWVMAGTVAISTFVALSACPALASKVLSARKLRANAPSGPRPPSWI QRAYRALLTRAIGMPLVILPVTLAITAGAALFYVDLPRELAPREDRGVGFVPLTAPQG STVAHSDMAARQVEAILDPLVQSGEVETVFSFTGWGGRSWRSFVVFRLAPWEERDRPV SEIVSEIAPQMGQVTIARGFPVTPAGLGLRGSSTPVQVVIGGPDFESVKEWAITLLER AEGVEGLVNPEINFEQNLPQLDIEIDRARADDLGISADVIAATLQTMLASREVTTFVS RGREYPVLVQAEDADRRSPTDIENIFLRAGDGETLVPLGALVTLNENAATPSLRRFDR LPSIQLSGALAPDAELGDVLEQLQEIAADILPPEAKLGYDGQSRTYIDTSAGVGVVFL LALLIVYLVLAAQFESFVHPLVIMLTVPIGVAGAIYAMAAGGLSLNVYSQIGIILLIG LISKNGILIVEFANQLRDEGYAVRDAVIEASVLRLRPIMMTAVSTVLGAVPLVTASGA GAESRIAVGTVIIAGLAMATALMLFVTPILYDLMARFTRPRGAIEKTLDAALGKNGQP AE" gene complement(1531314..1532498) /locus_tag="RTM1035_07448" CDS complement(1531314..1532498) /locus_tag="RTM1035_07448" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="Secretion protein HlyD" /protein_id="jcventer:1101493006648_RTM1035_07448" /db_xref="CDD:31186" /translation="MHQVSPRPQPTRALVPSENGLPHTMQIWKQLLLLCLIVGTAYGG YYGYQTYLVTAPEAAAEAQAERPVTVEIALAEERTLQQTIEAVGTTRALQSIDIVPEA DGRLTSLRITPGTRVEQGDVLARLDDTIQRADLSEAEAVLVEQRQTVERTRQLRQTAA VSQATEEEAVARLAEAEAEVERARRRLEDRTITAPFGGVVGLTNYDVGARVIEGQVLT RLDDLSEVEVEFSLPETVFSQVRPGQTLIARSAAFADRIFEGTLDVVDSRIDPVGRAF RTRGRIPNTDGTLASGMFLALTLVLSESAHVTVPEEALIFQAAETYVFVVADGKANRR IVTSGQRKDGQVAILSGLEAGEEVIIRGLQRVRDGSVVKVLGADADATAKTDLAKPES AT" gene complement(1532541..1535105) /locus_tag="RTM1035_07453" CDS complement(1532541..1535105) /locus_tag="RTM1035_07453" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="multi-sensor hybrid histidine kinase" /protein_id="jcventer:1101493006648_RTM1035_07453" /db_xref="CDD:30987" /translation="MHVPSSRRFPRLNRLLVILLGLFAVGCMLAAVLLTSRVYVQLDE YRSASQDNLHWTTSRLEVDQLKFLASLYALTGPEENLVDQVRRQFDILYSRATALRDG RVYREVLELDIAHADLDRVSELLASMVPIIDGDPGDIFKERARLIQLGSRMADPIRNI AARGLAADAQRSDSERAALTAKILSLAVLILMMLAALSSLLLLVWRVYRSYRMQAEQN ISKSNRLTTILNTSQDAVLVVGVDGWIEDTNARADDLLALTDRLTARIDLGDVLFCKG EDGTLKPLSGKLLRDTCASGPSRREDVIVRNLEGREFAAELSADFARQGEGDICILFI RDISERLAAEAEIDRSREKALAGERAKARFLAMISHEMRTPLNGILGALELLGDTGLT PEQEKFTRIMRSSGQLLLTQITDALDLTQAAARQIVLRPAAFDLDQLLAELTETQQGP AQARGNSLRLLAPQDGFGRVTGDRARIYQVLLNLVSNAIKFTRDGEITLDVSRLSSKD TEPDMIEFQVIDTGIGISADNLPNVFEDFMRVQDTTGDRPEGTGLGLGIARQLVKLMK GTIGVESELGEGSLFWVRLPLPAASAVVGPKPRAIVAPAPVSAPLRALDVLVVEDNAT NRVVLEGMLTGDGHKVHLACDGIEGVDCAQIRRFDLILMDISMPRMDGREATLHIRAS QGPNARTPIVALTAHVRAEDRGDLKNMGFDRVETKPLRREALRALLMQIGSAPSAPVD QPCHVDPSYMEQLRVALPQDRIDRLLVEFEAEGEAILDGLNRDAPLSGTDLADRIHKL AGTAAATGGLALQALLGRAESALRGGDTAEAQTAILALPDLLQETLRQLNGHNRAG" gene 1535496..1536104 /locus_tag="RTM1035_07458" CDS 1535496..1536104 /locus_tag="RTM1035_07458" /note="COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, LuxR family protein" /protein_id="jcventer:1101493006648_RTM1035_07458" /db_xref="CDD:32379" /translation="MTKLLLADDHDLVREMIAAYLRAQGGFEVHVAESLGAALDVQEK NGPFQLVLLDLMMPGMDSLTGLGVMKARAKCPVAILSGTATAEIGRRALRSGAAGFLP KTLDPQSLVAAVHHMLLGETYTPLDFLETGESEAEGPVRLTPRETDVLVGILHGKSNK EIARDLDIQEVTVKLHLKTLSRKLGAKNRTHAAMIARDMGLT" gene complement(1536459..1537289) /locus_tag="RTM1035_07463" CDS complement(1536459..1537289) /locus_tag="RTM1035_07463" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07463" /translation="MSISDQLITQRRAEPAKMREEMRQVLTEKEQQTLGINMGAGSDH PRAWVGPPFIYDLLGAMQFQLLIDLGMRENHKFLDVGCGSLRLGRLAINYLLENRYFG LEPNVDILNRGCEMHFGADIEKSQVIAKKKATFAHNTDFDFSLTGGPVDFVFAQSIAS HTGPAMTVKLLKAIADVSHDDTVSMVTYIRCGMPSKSNTEEGWFYPECVTYTDQAFGA FARQAGLHAYRTVWPATNIREDGLVTTQHPTILTKRPWKPRLNQRMTASLFEGIQKIN " gene complement(1537986..1538726) /locus_tag="RTM1035_07468" CDS complement(1537986..1538726) /locus_tag="RTM1035_07468" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Integrase, catalytic region" /protein_id="jcventer:1101493006648_RTM1035_07468" /db_xref="CDD:40748" /translation="MPQGRADEQRLTDDIIELADQYGRYGYRMVTGLLNNAGWCVNHK RVERIWRREGLKVPQKQKRKGRLWLNDGSCVRLRPERPNHVWSYDFVQDRTADGRVYR TLNIIDEYTREALMIRVDRKLNSTDVLDALTDLFILRGPPEYIRSDNGPEFIAQKVRD WIAAVGAKTAYIEPGSPWENGYCESFNARFRDELLNGEIFYSLKEAQILIEQWRVHYN TVRPHSALGYRPPAPESIVPLDQRPTMH" gene complement(1538834..1539112) /locus_tag="RTM1035_07473" CDS complement(1538834..1539112) /locus_tag="RTM1035_07473" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Transposase and inactivated derivative" /protein_id="jcventer:1101493006648_RTM1035_07473" /db_xref="CDD:41572" /translation="MAGKREKPEEIVSKLRQVEVLQGQGATIAEAVRQIGVTQQTFYR WRKLYGGMGRSQLARLKELEKENQRLRRAVSDLTLDKLILTEAAKGNF" gene 1539725..1539811 /locus_tag="RTM1035_07478" CDS 1539725..1539811 /locus_tag="RTM1035_07478" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006648_RTM1035_07478" /translation="MSNKHHLFLGFGRLLNDGLHISAHQMQF" gene complement(1540227..1540856) /locus_tag="RTM1035_07483" CDS complement(1540227..1540856) /locus_tag="RTM1035_07483" /note="COG1410 Methionine synthase I, cobalamin-binding domain" /codon_start=1 /transl_table=11 /product="5-methyltetrahydrofolate--homocysteine S-methyltransferase" /protein_id="jcventer:1101493006648_RTM1035_07483" /db_xref="CDD:31600" /translation="MPVVAISNDDTGISEDPDVRFAVAKKIVERAADFGIPAYDIVVD PLVMPVGAMATAGRQVFTLVRRLREELGVNTTCGASNISFGLPNRHGINNAFLPMAMQ SGMTSAIMNPIALPVKQSEIEAKKAEVAASGLILPDDMDDETFCQLFGLGSTKARPGK EMEAIMAANFLMNADPHGGNWIKFNKAPPKPGEEVRAGGRAGSRSRRRG" gene complement(1542270..1542566) /locus_tag="RTM1035_07504" CDS complement(1542270..1542566) /locus_tag="RTM1035_07504" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07504" /translation="MVDVTIVYWRDIPAQVIVGKGRRGSKVQLPERFEQAIDRAAMKC GAAGTDAYLAEWRKADPYPIEGEPDAVAQSEAARIDAEFDQERIKALIANDGWA" gene 1542803..1543915 /locus_tag="RTM1035_07509" CDS 1542803..1543915 /locus_tag="RTM1035_07509" /note="COG0248 Exopolyphosphatase" /codon_start=1 /transl_table=11 /product="Ppx/GppA phosphatase" /protein_id="jcventer:1101493006649_RTM1035_07509" /db_xref="CDD:30597" /translation="MTPKRPESAGAVPNTVESPALTRPDRGPLYAALDLGTNSCRMLI AQPEGHQFKVVDSFSKSVQLGAGLEGSGRLSRASIYRTIQALRVCKQKLKRHGVTRMR LVATEACRRASNGADFMQRVERETGLRLDIIAPQEEAQLAVVSCAPLVNQRTDQLLVV DIGGGSTELVWIDLTAVPHSERRRAIMRMHLGFHASPVGLPAARVVDWISVPLGVATL RDQFRDVEDDAARFALMSWFFEENLAEFAPYKDEQSRDGFQIVGTSGTVTTVAASHLG LKRYDRNKVDGLTMTSDEIDRVIRSYLALGPAGRRRDPRIGQDRQALIMSGAAILQAL LRCWPTDRLSVADRGLREGMLYAQMAADGVLTERDG" gene 1543916..1544374 /locus_tag="RTM1035_07514" CDS 1543916..1544374 /locus_tag="RTM1035_07514" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07514" /translation="MGDDGSAQSQNIWPLPKFYFRVTWDTAELNFQEVSGLDPDNQTI AYRAGNSPVFSQVKMPGIVKPSNITMKKGILIKDNSIFDWFAEINMNVIKRKDMTIAL LDQSGAPTMIWRVKNAFPVKLTAADLKAKGNEVAIESIEIAHEGLTIENV" gene 1544385..1545101 /locus_tag="RTM1035_07519" CDS 1544385..1545101 /locus_tag="RTM1035_07519" /note="COG0293 23S rRNA methylase" /codon_start=1 /transl_table=11 /product="ribosomal RNA methyltransferase RrmJ/FtsJ" /protein_id="jcventer:1101493006649_RTM1035_07519" /db_xref="CDD:30641" /translation="MAKTPDGKNTSGRGQRDLTVKVKTARGRTSSSTRWLQRQLNDPY VKRAQVEGYRGRAAFKIMELDDKFRFLVPGARVLDLGCAPGGWCQVAVPRVNALGEKQ GKAIGRIVGVDLQEVEPIMGCEIHQLDFMADDADQQVKDWLGGKADVVMSDMAASSSG HKQTDHLRIIALCEAAAYLAFDVLEVGGTFVSKVLAGGAEGELQTLLKKRFDKVANVK PPASRADSSEKFVVATGFRG" gene complement(1545106..1545303) /locus_tag="RTM1035_07524" CDS complement(1545106..1545303) /locus_tag="RTM1035_07524" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07524" /translation="MSDTDKRPKLDRARHALLFELIRQRGMAHSVSHRHISQPETDPS DLHLFVQAASRSIAPEDGKTH" gene 1545539..1546411 /locus_tag="RTM1035_07529" CDS 1545539..1546411 /locus_tag="RTM1035_07529" /note="COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase family protein, medium subunit" /protein_id="jcventer:1101493006649_RTM1035_07529" /db_xref="CDD:34249" /translation="MAEMRYEAPQDVEAAVRLLAAEQGAYVLAGGTDLLVKLRSEMVE PELVVDIKRIAGMKAITAEAGGWRIGAAVSGAEMGEHAGLVADWPGVVEAAGLIGSTQ VQGRATLAGNLCNASPAADSVPAMVAAGAVVRVVGPKGPRDVAVIDIPKSPGKTTLAA GEFIASVFLPARGARSGDAYLRFIPRTEMDIAVVGCGVSLSFDDEGKVSAARVALGAV GPKVMLVDAAAEAIIGRALDEAALTDLAAACSEAANPIEDKRGTVEFRRHVAGVLARR AAVIAETRAKGDKA" gene 1546408..1546887 /locus_tag="RTM1035_07534" CDS 1546408..1546887 /locus_tag="RTM1035_07534" /note="COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase family protein, small subunit" /protein_id="jcventer:1101493006649_RTM1035_07534" /db_xref="CDD:32263" /translation="MSRIHVTTKVNGDETEFLCDAEATLLDVLRDELGLTGTKEGCGT GDCGACSVTVDGRLVCSCLMLGAEAEGCEITTIEGMAAGEVLHPLQKKFIEMAALQCG ICTPGILVAAKSLLERNPDPSEEEVRYWLAGNLCRCTGYDKIIRAVMETAADMRRAS" gene 1546887..1549133 /locus_tag="RTM1035_07539" CDS 1546887..1549133 /locus_tag="RTM1035_07539" /note="COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase family protein, large subunit" /protein_id="jcventer:1101493006649_RTM1035_07539" /db_xref="CDD:31718" /translation="MALDDTKKTKDFKVVGTRPNRPDGIDKVTGRARFGADMVAPGML TGRVLRSPHAHARILRIDTSKAEALPGVKAVVTRADFGDVPDHVADVIDNCMAGDKAL YDGHAVAAIAANSAAVARKALKLIEVEYEVLPHVTDVDAAMKPGAPVLHEGAQQETVP EGYSGNVISRVEFGHGDIEAGLAKADRVVERTYRTGATHQGYIEPHACLATMSADGQA DLWVCTQGHYMVRNVCAAILGMEQGQLRVTASEIGGGFGGKTVVFLEPVALMLAKKSG RPVKMVMSRSEVLRATGPTSSTSIDVRIGMKKDGRITAGFAELRYQGGAYPGSPVDMG SMSAFAPYDLENVKTVGWDVVTNRPKAAAYRAPGAPMAAFAVESAIDELAKGFGLDPL AVRLMNGAKEGTRASYGPTYPAIGLIATLEAAHTHPHWTAPLGENQGRGVACGFWFNF GGDTCVSLNVTPDGTVTVSEGNPDIGGSRASMTMMAAEELGIPYDQVRTVIADTGSLG QNEVTDGSRVTFAVGLATIEAARAAKREMCKRAAMIWGIDEEAVEWEDGAARPAGPNA GKFPPMTIKEIAAVASNTGGPIAGHHEVTAEGAGVSFGTHMVDVEVDPDTGATKILRY TVFQDAGRAVHPAYVEGQFQGGAVQGIGWALNEEYIYGEDGILQNAGFLDYRIPVASD LPMIDTVILEIPNPGHPYGVRGVGETPIVPPLAAVANAVSAAAGVRMTQLPMSPPRVL AAIQAAKG" gene 1549133..1549378 /locus_tag="RTM1035_07544" CDS 1549133..1549378 /locus_tag="RTM1035_07544" /note="COG1977 Molybdopterin converting factor, small subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07544" /db_xref="CDD:29161" /translation="MVKVVLWGSLAESAEGQREVAVEAATLRELLDGLGETFPGLRAE LERGVSVSIDGRVYNDSWFTPIKPDSEVVLLKRLKGG" gene 1549452..1551623 /locus_tag="RTM1035_07549" CDS 1549452..1551623 /locus_tag="RTM1035_07549" /note="COG1252 NADH dehydrogenase, FAD-containing subunit" /codon_start=1 /transl_table=11 /product="selenide,water dikinase, putative" /protein_id="jcventer:1101493006649_RTM1035_07549" /db_xref="CDD:31053" /translation="MMPAYVPLTRDLVLIGGGHAHALVLRMWGMDPLPGARLTVIDPN PVAPYTGMLPGLVAGHYRREELEIDLVRLARFAGARLIVGAVTGIDAAAGRVTVAGRG EIGFDVASVDVGIHSAMPQVPGFADYGVAAKPLGPFAGAWEEFLRRVADGAAPQAAVI GGGIAGIELAMAMAYRLKGVAGRAEVTLIERSAEIAPGAPVIRPRLTRACVAAGVRIV TGGDVAQVTGAGVILGDGTEIAAGFVAGAAGARAHGWLAKTGLPVTADGFLRVGADLR VEGQEAIFAAGDCAHLTHAPRPKAGVYAVRAAPVLRDNLRAVLSGGTTRAFHPQRDYL KLISLGEKSALAEKMGMAFGGRLLWRLKDRIDRKFMVQFGDLPVMGAAEAPAVRALGD LGPEPLCGGCGAKVAPGVLSAVLAQERPPARADIVTGPGDDAAMIMVGGVRQVLTTDH LRGFTEDLGVMARIAALHALGDVWAMGAKPQAALVSVTVPRMSEGLQARTMAEIMAQA GEALRTAGAEIVGGHSTLGAEASIGFTVTGLLERDAITVAGARVGDALILTRPIGSGV LLAAEMRGLADGRDIAALLAALQVPQGAAAEILLGAHAMTDVTGFGLAGHLMAICRAS GVAAEVDLAAVPVYDGAEALAAAGVRSTIWAANVAAAPVTGGAGARVALLHDPQTAGG MLAAVDGGEAEELVARLRAAGHVAAVIGRVVAGPVGIVVKG" gene complement(1551877..1552911) /locus_tag="RTM1035_07554" CDS complement(1551877..1552911) /locus_tag="RTM1035_07554" /note="COG2603 Predicted ATPase" /codon_start=1 /transl_table=11 /product="tRNA 2-selenouridine synthase, selenophosphate-dependent" /protein_id="jcventer:1101493006649_RTM1035_07554" /db_xref="CDD:29083" /translation="MPITLDSLAALAALPFDEVIDVRSPAEYAEDHIPGALNLPVLSN EERARVGTIYVQQDRFLARKIGAALVSRNAAAHLEGPLADRSGGWRPLVYCWRGGQRS GSFTVILQQIGWQAETVKGGYQSYRRLVARALYEEPFPAPVRLIDGGTGTGKTHLLTH LAALGAQVIDLEDLAAHRGSVFGPVAGGQPSQKSFESALAARMARLDPTRPVYIEAES SRIGRITLPPMLARAMRSAPVIRINVPLAARVSNICTDYTDLIADPNRLDAILSRLVQ YHGHAQVDQWRALGASGDFPTLVAQLIETHYDPRYIRKPRPEGITPLELPDLSEATLQ AAAKGLIQSG" gene complement(1553046..1554383) /locus_tag="RTM1035_07559" CDS complement(1553046..1554383) /locus_tag="RTM1035_07559" /note="COG2072 Predicted flavoprotein involved in K+ transport" /codon_start=1 /transl_table=11 /product="flavin-containing monooxygenase" /protein_id="jcventer:1101493006649_RTM1035_07559" /db_xref="CDD:32255" /translation="MTKKRIAIIGAGPSGLAQLRAFQSAAAKGAEIPEIVCFEKQDNW GGLWNYTWRTGLDQYGEPVHGSMYRYLWSNGPKEGLEFADYSFEEHFGKQIASYPPRA VLFDYIEGRVLKAGVRDLIRFSTAVRWVEKDGEKFNVTVCHLPEDRTYTETFDHVIVC SGHFSTPNVPYFPGFENFKGRVLHAHDFRDALEFKDKDILIVGTSYSAEDIGSQCWKY GCKSVTVSHRTAPMGFKWPDNWQEVPLLQKVEGNTAYFKDGTTKDVDAVILCTGYKHH FPFLPDDLRLKTANRLATADLYKGVAFVREPALFYLGMQDQWFTFNMFDAQAWWVRDA IMGRIAIPDQAAMEADVADRVAREDAGQDDYDAIWYQGDYVKELIDETDYPSFDVEGA CQAFKEWKGHKKKDIMGFRNNSYKSVITGTMAPLHHTPWKDALDDSLEVYLQN" gene 1554546..1555847 /locus_tag="RTM1035_07564" CDS 1554546..1555847 /locus_tag="RTM1035_07564" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic substrate-binding protein, putative" /protein_id="jcventer:1101493006649_RTM1035_07564" /db_xref="CDD:31027" /translation="MSNSSFAQRLAIQSALPRFSVGMRKTLTIGFLAPLSGPVESWGL PGLQGCRLWVDWLNRAGGVLMGGRRFPVRLESYDCGYDGADALTGARHLVQEHDAALV MMLGGDSFTEVRDYLMGQKVLTSSLLTSDLSPDTPYLIAPGESLPIYTVTAVEWIAKN RPEIKTVALCAQTDALGLPALAAYRAAFKAVGIEIIEEIRYDPGTASAPAVVAPMLAA APDMLCWCTSYTPMVHAMTEYAYHQGYAGQILSCTADCYEQLIALTSPEFMEGFLFQF PDFDDPALAEKAFFFNQPQAFYDEYNARFPGSWTAVSWEYAAILDIWQSAVERAGTVN SVSVLAAMRQLGEVNHAFGPAQWWGQDMFGLDHTLIGDWPVVQIQGGKARIVGFGSIP DWLARHEPLLRAEMAALGQLWHQRHGQGAGKACLEARLVVS" gene complement(1555869..1556591) /locus_tag="RTM1035_07569" CDS complement(1555869..1556591) /locus_tag="RTM1035_07569" /note="COG2186 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family protein" /protein_id="jcventer:1101493006649_RTM1035_07569" /db_xref="CDD:32369" /translation="MANQSTTAQLVTSHSVGATVQVVIDSLFARIKSEEYPEGARLPS ERTLSSELGVARNTVRDALDVLEARNIIRRRAGSGSFVTYKSELTRTPSRSALAENTS PLDHLVVRGILEPEMIRLAVINMTPRDIMELDDILTRMEAISTDAAEFVACEEDFYRK IAAGTGNPLLASCYDLAIEACLQTHRSTMMRRHLTPKRIEDYQKRYNALFNAISSRDV ETAVEYIKLHLIEEQKTLLQED" gene 1556991..1558280 /locus_tag="RTM1035_07574" CDS 1556991..1558280 /locus_tag="RTM1035_07574" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic substrate-binding protein, putative" /protein_id="jcventer:1101493006649_RTM1035_07574" /db_xref="CDD:31027" /translation="MLSKYISKGFTRRTFLKTSAAATAALGLPKVALAAGEPIKIGFL APLTGAVAAWGKPGLDGCMIWAERVNAAGGITLADGAHPVEFVAYDEEYDPAKARTGA TKLIREDGVSFIMMLGGDPWPGVQPVAERTGMLFSTLLPSDLSPDTKTLLAPAEVHPI YNVTGVEWLAQNKPELKTAVMCAQDDALGLPSVATYLAAFEAAGIEMLDEPLLFDPAT TDFAPVVTRLMAKNPDIICLDTCYSDYVHPIAEQLFQQNFKGQIISCTADFYDQMIAK TSKEFMEGFIFQFPDFDDPALNAESVNFQDPNGFYAEYNKRHPGQWGAVSWEYASIMD LWKVAAEKAGSADPEAVLAAMKDGPGNHAFGEAEWWGTELFGIDNALVGDWPVVAIEN GKAVIKEFRSIPDWYSRHGDLLIKHMQAYGQMWDQRG" gene 1558349..1559218 /locus_tag="RTM1035_07579" CDS 1558349..1559218 /locus_tag="RTM1035_07579" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter (permease)" /protein_id="jcventer:1101493006649_RTM1035_07579" /db_xref="CDD:30905" /translation="MMELLAQTGLNAVYAASYISLVAVGLVLIFGVMGVINFAHGELF MAGAYAVVALYADMHLPFFVAVPIGMIFVGMLGLVMERGLFRPLKGNPLGGLVASIGF LMILQSLAVMGFGVRMEHIPPVTQEVWRISDKVGLPVARIYVIVAAVVLLSALWYFLK RTRFGWALRASAQDPEAAALQGISITQTARIAMFIGAALAGVAGALTAPLVSVNPHMG HSVIVTAFIVIIVGGVGSLEGAIIASVVYAFVHTFVTTFSDGVVADIVGLSLMLVVLI VKPTGLFGSADRA" gene 1559202..1560188 /locus_tag="RTM1035_07584" CDS 1559202..1560188 /locus_tag="RTM1035_07584" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="inner-membrane translocator" /protein_id="jcventer:1101493006649_RTM1035_07584" /db_xref="CDD:33917" /translation="MRIVLKPVMFLLGAAALIALPHGLSFSQQEILVFLVINILLVMS YRLLTLTGEWSLGHVVIMGVGAYASALMTKNLGVPVPVGMILGGVTAALLAVLLSFPL FRMKGFYFLIGSFAAGEIIRLIWKRFREPFGGARGISGIDPMPDFSLGFYSFDFFEPV SYYYFAGTIVAVCLWVLWRIEKSPVGLTFHAVHWQDKLAQASGVNLRAYRTLAFAIAS GFAGIAGALQAHYVGTVNPNSFDIEVMVFVLTWAIVGGTTTFYGPILGCVLLTVINEV VLRGMGFEQARPLFYGAIMILSILFLPNGLESIVQKILPRKATAKPDRKAAA" gene 1560185..1560952 /locus_tag="RTM1035_07589" CDS 1560185..1560952 /locus_tag="RTM1035_07589" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transport system ATP-binding protein" /protein_id="jcventer:1101493006649_RTM1035_07589" /db_xref="CDD:48252" /translation="MTDFLEMRGLTMRFGGLMAVDGLSFKVAHGSIHGLIGPNGAGKT TTFNMISGFYTPTSGQILLRGEDISGLAMHEVARRGVVRTFQHSTLFAELTVLENALV GTHMPFRPNIFAAIIGWDREDRRGAEARAREALEFFGLGDLADERAGDLSHGHQRALG LAVAYASHPDVMLLDEPFTGMNPEETRQMMELMRRLKADGITILLVEHDMQAIMGLCD TITCMSFGKFLAEGGPADIRHHPAVIEAYLGGARHVA" gene 1560942..1561649 /locus_tag="RTM1035_07594" CDS 1560942..1561649 /locus_tag="RTM1035_07594" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="branched chain amino acid ABC transporter ATP-binding protein" /protein_id="jcventer:1101493006649_RTM1035_07594" /db_xref="CDD:30759" /translation="MLLEMRKIAVNYGKINAIRDISIAVPEGKIVTIIGGNGAGKTTT LRAMSGMIPIVAGEILFEGTRIDHLPAHKVVAHGIAHVPEGRRIFKDMTVEENLRTGA FLRRDKPEIERDLEQVYDRFPRLRERRVQRAQTMSGGEQQMLAIGRALMSKPRLLLMD EPSMGLAPVIVEEIARIIEEINAQGLSVVLVEQNAELALELAHHAYVLETGNTAMEGP AHELRGNEHVRAAYLGL" gene 1561621..1562211 /locus_tag="RTM1035_07599" CDS 1561621..1562211 /locus_tag="RTM1035_07599" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07599" /translation="MFAPRTWGFERGDAEMQVARAAGWSRADLVWERLTEAGCACYQA GDRLGADRMLRRAGWVARLFFSARDLRRATSLANLAVLARDAGQGARAEQLQKRALTL WRTAPEVAGGLVFKPRSRSSLFHLRMEALHRDTFHDNMRKRYRAIAADSDQALRQLLA GARPERPISARWRGEKPPVFDDGRKFLAAALLISEG" gene complement(1562249..1563100) /locus_tag="RTM1035_07604" CDS complement(1562249..1563100) /locus_tag="RTM1035_07604" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07604" /db_xref="CDD:32580" /translation="MTALILGLVAALAWGTHDVCVRYVSQNNGIFAPLVWVLAFGLII VTPISAYAGLHAPEGGDIGLAVLAGLCFGVGGTALYRAFSIGPVRLVAPVIGAYPILS VGWASLNGAPTTALEWIMVGLIICGVAYIAQSDAGHDHAEAPSPLPAIAWSLLAAVGF ALTFAIGHKATATGGELLLLAPTRAAALVVVLGFALALRAPLALTRRHTPLLILMGTL DALAIGCVIGAGQTARPEFAAIGASTFGVITVLFAAIFLRERLRGSQWLAVLGVFTAI GVLGGGH" gene 1563246..1565615 /locus_tag="RTM1035_07609" CDS 1563246..1565615 /locus_tag="RTM1035_07609" /note="COG3665 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="putative aminomethyltransferase protein" /protein_id="jcventer:1101493006649_RTM1035_07609" /db_xref="CDD:30753" /translation="MLETRYPEVQAGPPRPSVIVEPWVFALPPGTERYVVDGAGAILI RIEAGDRLRVVNTEGGQRCEIVAAGPDGTVDPGILGEAGTGDAAGLKALLAGSETSLR GLRMGLEARGMDLARVRSVDVFDSMSPAGDAAEFTVLRDGVAVIAAPGGIMDFAAQDT ATPLTVWVTRAKLKSAARFELPDPLADPVTDLRVHSATAEAYFVKAGDYIQILDVDGR QCTDFQCFAARKLDKGIEHALDVTTTRTLMGHAYPMPGLHAKYYDQDMLPLVEVVQDT VGRHDAFALACAAKYYDDIGYPGHVNCSDNFNGALAPHGVTGRAGWMAINFFFNTGID AHGVLYTDEPWTRPGDYVLLRALTDLVCVSSACPDDTTAANGWNPTDIHVRTYSGKET FQRSVAYRPTPDAEPKMTKQTGFHPCFARFTENFIEYNGFWLASAMSSAGPIEEYHAC RQKSVVLDLSALRKFEITGPDSEALCQYVFTRDIKKLPVGGVVYTAMCYPHGGMIDDG TVFRLGQDNFRWIGGSDYGGEWLREKAQELGLKVLVRSSTDMQHNIAVQGPESRDLLK KVIWTAPHQPKFEELGWFRFAPARIGDHDGVPVVVSRTGYTGELGYEIFCHPKHAVEV FDAVWAAGKDHGLTPMGLQALDMVRIEAGLIFAGYDFSDQTDPFEAGIGFTVPLKSKP DDFIGRKALIRRKEHPARVLVGLDIDSNVAVGHGDCVHIGRAQIGEVTSSMRSPLLGK NIALARLDVAHHAVGTAVEIGKLDGQQKRLPAQVVPFAHYDPQKTKPRS" gene 1565661..1566101 /locus_tag="RTM1035_07614" CDS 1565661..1566101 /locus_tag="RTM1035_07614" /note="COG2346 Truncated hemoglobins" /codon_start=1 /transl_table=11 /product="protozoan/cyanobacterial globin family protein" /protein_id="jcventer:1101493006649_RTM1035_07614" /db_xref="CDD:29978" /translation="MSTALDDIGGEARLRDLVRTFYDRMEQDPAVYALHRLHFRGHGL EHTRQTQFEFLSGFLGGRAYYRERFGHMDLREIHAHVPIRQADVTMWLETFDAALRAE GMEGPVVERFRAVLHRAAHMLINTVPDWREEAGHLGQECPVSGA" gene complement(1566401..1567729) /locus_tag="RTM1035_07619" CDS complement(1566401..1567729) /locus_tag="RTM1035_07619" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="glutamine synthetase III" /protein_id="jcventer:1101493006649_RTM1035_07619" /db_xref="CDD:40220" /translation="MTSDLAKFAKDKGVKYFMISYTDLFGGQRAKLVPAEAIADMQED GAGFAGFATWLDLTPAHPDMLAVPDPASVIQLPWQRDVAWVAANCVMDGKDLPQAPRN VLRRLIAEAAAEGMHVKTGIEAEFFLLTPEGDQISDPFDTSGKPCYDQQAVMRRYDVV REICDYMLELGWEPYQNDHEDANGQFEMNWKYDDALDTADKHSFFKFMTKSVAEKHGF RATFMPKPIEGMTGNGCHAHISVWDGPGKQAKTNVFAGKGEGQTGEVGLSERGKHFLG GIMKHASALAAITNPTVNSYKRINAPRTISGATWAPNSVTWTGNNRTHMVRVPGPGRF ELRLPDGAVNPYLLQAVIIAAGLSGIRSKADPGKRHDIDMYADGHKVRGAPKLPLNML DALREYDKDKELKATMGEDFSAAYLKLKRQEWNSFVSHFTKWERDNTLDI" gene complement(1567803..1569146) /locus_tag="RTM1035_07624" CDS complement(1567803..1569146) /locus_tag="RTM1035_07624" /note="COG0069 Glutamate synthase domain 2" /codon_start=1 /transl_table=11 /product="glutamate synthase family protein" /protein_id="jcventer:1101493006649_RTM1035_07624" /db_xref="CDD:30418" /translation="MKDETHGAPRTQPIQSATFTQSINAEIRRAAATGIYDIRGGGAK RKVPHFDDLLFLGASISRYPLEGYRERCDTSVTLGTRFAKNPIHLDIPVTIAGMSFGA LSGPAKEALGRGATLAGTSTTTGDGGMTPEERGHSKKLVYQYLPSRYGMNPDDLRRAD AIEVVVGQGAKPGGGGMLLGQKISDRVAQMRNLPKGIDQRSACRHPDWTGPDDLEIKL LELREITGWRVPIYIKVGGARPYFDTTLAVKAGADVVVLDGMQGGTAATQDVFIEHVG QPILACIREAVRALQDLGMHREVQLIVSGGIRTGADVAKCMALGADAVAIGTAALIAL GDNDPKWESEYNKLGTTAGAYDDWHEGKDPAGITTQDPELMKRFDPIEGGRRLNNYLK VMTLEAQTIARACGKSHLHNLEPEDLCAVTMEAAAMAKVPLAGTDWWPGKPGTSF" gene complement(1569158..1569835) /locus_tag="RTM1035_07629" CDS complement(1569158..1569835) /locus_tag="RTM1035_07629" /note="COG0070 Glutamate synthase domain 3" /codon_start=1 /transl_table=11 /product="FwdC/FmdC family protein" /protein_id="jcventer:1101493006649_RTM1035_07629" /db_xref="CDD:30419" /translation="MQTFDLAADGLRSLNATLQAQANETNQTGWDIINPRGSHAIAVG LDAPIEVHVMGSTGYYCAGMNKQATVHVHGSAGPGVAENMMSGTVIVEGDASQYAGAT GNGGTLVIKGNASSRCGISMKGIDIIVHGNIGHMSAFMAQSGNLVVCGDAGDALGDSL YEARLFVRGSVKSLGADCIEKEMRPEHLDLLAELLERGGCDAKPEEFKRYGSARQLYN FKPDNAY" gene complement(1569837..1570733) /locus_tag="RTM1035_07634" CDS complement(1569837..1570733) /locus_tag="RTM1035_07634" /note="COG0067 Glutamate synthase domain 1" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase, class II" /protein_id="jcventer:1101493006649_RTM1035_07634" /db_xref="CDD:48480" /translation="MCGIVGLFLKDKALEPQLGSMLTDMLITMTDRGPDSAGIAIYGA PQAGHAKLTIQSDTAARDFDGLAERLSSELGAPVTLTRKDTHAVLDFPADKAADTRAA LERLVPGVRVMSAGESIEIYKEVGLPKDVAARFEISAMSGTHGIGHTRMATESAVTTM GAHPFNTGADQCLVHNGSLSNHNSLRRKLLREGVRIETQNDTEVAAAYLTWKMREGAT LGEALESSLVDLDGFFTFVVGTEDGFGVVRDPIACKPAVMAETDQYVAFGSEYRALVN LPGIEQARVWEPEPATVYFWKH" gene complement(1570882..1571097) /locus_tag="RTM1035_07639" CDS complement(1570882..1571097) /locus_tag="RTM1035_07639" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07639" /translation="MSTIGYESWAVDLAEVGPIYPFQGYEIPMVVAGVIFWLAWHRIQ FVREGEHLEEARKMGDPEKIRKHLERY" gene complement(1571109..1572482) /locus_tag="RTM1035_07644" CDS complement(1571109..1572482) /locus_tag="RTM1035_07644" /note="COG0004 Ammonia permease" /codon_start=1 /transl_table=11 /product="ammonium transporter family protein" /protein_id="jcventer:1101493006649_RTM1035_07644" /db_xref="CDD:40986" /translation="MNGNLDALTTIFTEFYYWVTVVFMFLIHVGFCMYEVGASRRRNH MHTLMKNVMVIPLVTVTFFFFGWWIYWAFPMFPFFGGLNHEMASANLPWSPNMATNLD DRITGVFWAAFLLFSWTAASIVSGSVIERIRSSALWVHAVLIGSVWWIIDAAWGWHYD GWMVKYLGYHDAYASGVIHAIAGGYALGVIMVLGPRIGKFAADGTPRDIPPHNPWMLT IGIFLIYTGFWGFYAACNVPLISPEVIGGQITGTTWTATNIYLAPTSLSAITFNFLMS LSGGLMAAYVVSKGDAFWTFSGGLAGIITASAGNDLYHPVQAMLVGAVGVVIVYKLHF WVERRFKLDDAVGAVAVHGYSGVVGLIIAGFLLWGAPSSPFEGYATINPLGQTLGAVI MFFCLGFLPAFIVAKMQAAAGVLRIPVEVELQGLDYAEHHAYEDAIVQVIEADKAYLN TKPTPAE" gene 1572731..1573876 /locus_tag="RTM1035_07649" CDS 1572731..1573876 /locus_tag="RTM1035_07649" /note="COG0404 Glycine cleavage system T protein (aminomethyltransferase)" /codon_start=1 /transl_table=11 /product="aminomethyl transferase family protein" /protein_id="jcventer:1101493006649_RTM1035_07649" /db_xref="CDD:30753" /translation="MAIIYRTSALAPRHTEIGGELTDWNGMGTAWFYDHTDERAEADY LAVRTKAGLMDVSGLKKVHIVGPHAAAVIDRATTRNVDKIMPGRAVYACMLNDAGKFI DDCVIYRLSVNHWMVVHGTGTGHETLAMAAYGKNVAMLFDDDLHDMSLQGPVAVDFLE KHVPGIRNLAYFGILQTKLFDLPVMISRTGYTGERGYEIFCQGRHAIQIWDRILEEGK DMGIVPVQFSTLDLLRTESYLLFYPGDNSETFPFKDDLCGDTLWELGLDFTVSPGKTG FRGSENHYALKGKERFKIYGVRLEGKRAADMGAPLLKDGEVVGVVTFGLNSNLNGYNV GIARMPVDCAVPGTKMSVRYADGTEVGCVAEEMPFYDKDKLIRAAKG" gene 1573932..1574540 /locus_tag="RTM1035_07654" CDS 1573932..1574540 /locus_tag="RTM1035_07654" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07654" /translation="MSKFQFPESIASRPVYGTLAPRPGKAHLMIADAEGAEALLDLAA QDAGLMAKTHVLYIPKGTGETYVDKLRAAGPAQLYVGPSYAASVPRLRRVLSDAHMGL QVYLAGTEGLMGQAMNEAVTAGIPHSAIQTEHRGSTARRMQCVHCKGITEDVTTDPFV CSHCGLNLFVRDHYSRRLAAFQGVCIDAEDPGNIPPAKEIYS" gene 1574537..1575523 /locus_tag="RTM1035_07659" CDS 1574537..1575523 /locus_tag="RTM1035_07659" /note="COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1" /codon_start=1 /transl_table=11 /product="oxidoreductase NAD-binding domain/2Fe-2S iron-sulfur cluster binding domain protein" /protein_id="jcventer:1101493006649_RTM1035_07659" /db_xref="CDD:31221" /translation="MSAAPQKARAGAEKIEVVVAAVVPVNELVTRFEFRRPDGAEFPP FSAGAHTVVEMHDEGRTRLNPYSLMSDPGDRSLYAISVRRDDEGRGGSLYMHRHVKPG DAMTITYPVNLFPLDLRARKHVFFAGGIGITPFMAMIAQLEQSNGNWELHYACRSAAL GTYADELRGKYPNKAHVYYDDQEQAIPLDDLLSGQPLGTHIYVCGPKGMITWVKTRAA ALGWPEEAVHSEEFLAPQPGAPFEVRLCKSDLVIQVGEHESLLEAIERAGVDAPFLCR GGACGQCETDVVEVDGEIVHRDHWLDEADHASGKKIMPCVSRFIGKTLVLDR" gene 1575537..1576604 /locus_tag="RTM1035_07664" CDS 1575537..1576604 /locus_tag="RTM1035_07664" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07664" /translation="MTIQFNNETFRDDYSFRNSAWAIKRFPFPFHEDSYMYSVNMEQH RGGPAGSVYEKRFDVDEHYLSEMRDRALVLADDPLRCQSLPHMTLAGWDVLELIMTCK AEDYPDLFELHRDGNRWRWINKPMGIDHSFTFLDPTTLPCGPLEYITRQTQGDFAVLD QRDEMLWMDAGMVTTQADWSLDFDIGMNFFEWHAPVPLAHEMGIFQRALKFLLNVQQG APARRLNWTMTVNPLLDTSPENYHKWGVQKTTLTPENIGAKQHLRVELQTFFRLPRSN ALLFPIRCYLIAFQDVVSVPKWGRRLHRVVRDLPEELATYKGFIANRPMMIEYLSQYD DGLPTSPGIWPDLETEPPLQK" gene complement(1576730..1577377) /locus_tag="RTM1035_07669" CDS complement(1576730..1577377) /locus_tag="RTM1035_07669" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /protein_id="jcventer:1101493006649_RTM1035_07669" /db_xref="CDD:28977" /translation="MSIMEPAKLVKLTQDPHKLRDEREKVLEVAIGREVRAYRKKQNI TVAELSNMTELSIGMLSKIENGNTSPSLTTLQTLAHALSVPLTAFFKEYEERREAVHT KAGQGVEIERAGTRAGHQYNLLGHIGSNSSGVMVEPYLIELNSESDTFKTFQHEGIEM IYMLDGEVGYRHGNETYHLTPGDTLFFDADAPHGPDQLIRFPIRYLSIISYPQKS" gene 1577524..1578522 /locus_tag="RTM1035_07674" CDS 1577524..1578522 /locus_tag="RTM1035_07674" /note="COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006649_RTM1035_07674" /db_xref="CDD:34583" /translation="MTQRVIRIGFLIFPGFPMSCLTSVIEPLRAANEISGHRTFAWDL VAEGAERVMSSAGIGFEPGRRLSETDDCDYLLLLSAPTSRFADARSAAHLRRMARHGT VLGAISGGVFPLLRSGAVADVALSVHWCYEAAFLAEFPGVPASDQVIEITPRCVTASG AAAAFDLALHMVDTALGAGIATEVACWFQHPMMRKAGVQQMVPVLGEGARATDLPPMV ARAIDLMAQHMAAPLSMAEVAEDLGITPRHLERSFKRATGQNPTNYFRAMRMKAARQI VMYSNDTMAQIAEAVGYASSKVLVRHYRDAFGISPREDRQRINLTRVKGNLPVPSV" gene complement(1578640..1578978) /locus_tag="RTM1035_07679" CDS complement(1578640..1578978) /locus_tag="RTM1035_07679" /note="COG3070 Regulator of competence-specific genes" /codon_start=1 /transl_table=11 /product="TfoX domain protein" /protein_id="jcventer:1101493006649_RTM1035_07679" /db_xref="CDD:44897" /translation="MPAPVSSIRNLGPASDAGYARAGIHDADSLRAMGADAAYEALLR NGTAPHFIGYYALVMGLQGRPWNDCQGSEKIALRARFDAIKARVSGAGDAPDSAIEAI LNQIGTGLRR" gene complement(1579001..1579074) /locus_tag="RTM1035_t09488" tRNA complement(1579001..1579074) /locus_tag="RTM1035_t09488" /product="tRNA-Met" gene 1579187..1580233 /locus_tag="RTM1035_07684" CDS 1579187..1580233 /locus_tag="RTM1035_07684" /EC_number="6.3.3.1" /note="COG0150 Phosphoribosylaminoimidazole (AIR) synthetase" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole synthetase" /protein_id="jcventer:1101493006649_RTM1035_07684" /db_xref="CDD:30499" /translation="MTERQNGITYADAGVDIDAGNALVERIKPAAKRTNRAGVMSGLG GFGGLFDLKAAGFSDPVLVAATDGVGTKLRIAIDTGHVDGVGVDLVAMCVNDLICQGA EPLFFLDYFATGKLELEQATRIIEGIARGCEGSGCALIGGETAEMPGMYPKGDFDLAG FAVGAMERGTELPAHVAEGDVLLGLASDGVHSNGYSLVRRIVEMSGLGWTDACPWAEG SLGEVLLTPTRLYVRPVLAALQAGGIHGLAHITGGGLTENLPRVLPEGLGAEIDLGAW QLPGVFRWLAETGNMAEAELLKTFNSGIGMIVVVAADEAEAIEGALREAGETVHRLGQ VVPGKGVAYRGRLL" gene 1580230..1580823 /locus_tag="RTM1035_07689" CDS 1580230..1580823 /locus_tag="RTM1035_07689" /note="COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase" /protein_id="jcventer:1101493006649_RTM1035_07689" /db_xref="CDD:40637" /translation="MSKRVAILLSGGGSNMRALVTSMTGEHPARPALVLSNRADAGGI AWAKAQGIATEVVDHRPHGGDRAAFEAEIDARLRPYAIDIICLAGFMRVLTAGFVTPW QGRMINIHPSLLPKYRGLHTHARALEAGEQEAGCTVHEVTAELDEGPILGQARVPVLA TDTPDTLAERVLVQEHILYPAVLRRFAQGNRAPLYLP" gene 1580915..1582075 /locus_tag="RTM1035_07694" CDS 1580915..1582075 /locus_tag="RTM1035_07694" /note="COG0349 Ribonuclease D" /codon_start=1 /transl_table=11 /product="ribonuclease D" /protein_id="jcventer:1101493006649_RTM1035_07694" /db_xref="CDD:30697" /translation="MKTITTTDDLAAFCAMARKHPYVTLDTEFLRERTYYSKLCLLQM AVPGADDDTAVLVDPIDGAEMSMEPLYELFRDTSVVKVFHAARQDLEIFHVDAGVIPD PLFDTQVAAMVCGFGEQVGYETLVKRIAKQTVDKSSRFTDWSRRPLTEAQKVYALADV THLRVIYEYLAKKLASSGRDKWVAEELSVLTDPATYRTDPADAWQRVKTRNTSPKFLA ILRELARFREEYAQSHDVPRSRVYKDDALVELASTKPVTHQDLGRSRLLLREARKGDI ADGILAAVKAGLECPAERMPRAEALEDRAQVNPALADLLRVLLKAKSESYGVAAKLIA SASDLDAIAAGMRDLPALRGWRLDVFGADALRLCKGEVALAVKGSGVETVDL" gene complement(1582117..1582653) /locus_tag="RTM1035_07699" CDS complement(1582117..1582653) /locus_tag="RTM1035_07699" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="jcventer:1101493006649_RTM1035_07699" /translation="MTGAHGMQRRVFLSLVAMSALAGCGGYRRSRANPRNWFGRSTPR RRTAEPAPANTNPLIPEREDTIFRRRRDKVYEGTPVDQVTRMVIERTSDGGIVRVEGV ALRQGAFDVRLVSDTENEPVNGVLELRLMAIQPEDQPQGSERARTVLAGVFLSNQALE RANEIRVIGARNEQVSRR" gene 1582762..1583172 /locus_tag="RTM1035_07704" CDS 1582762..1583172 /locus_tag="RTM1035_07704" /note="COG2166 SufE protein probably involved in Fe-S center assembly" /codon_start=1 /transl_table=11 /product="Fe-S metabolism associated family protein" /protein_id="jcventer:1101493006649_RTM1035_07704" /db_xref="CDD:32349" /translation="MATAAFEEIVEDFEFLDDWEDRYRYVIDRGRAMEPLEAALKVPS TKVEGCASQVWLHPRIEAGVFSFDGDSDAMIVRGLIAVLRALYNGVPVAEVERVDAPA ELARLGLDAHLSAQRSNGVRAMIERIRLVASEAA" gene complement(1583237..1583878) /locus_tag="RTM1035_07709" CDS complement(1583237..1583878) /locus_tag="RTM1035_07709" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07709" /translation="MDLTDDHLTTQGLEAEGRGRLLLIACGALAHEILALKRHNGWDH MDLQCLPAKLHLYPEKITEEVEKAVIAQRANYDRIFVVYADCGTGGLLQAKCADLGVE MVAGPHCYAFYEGLDRFAAHEDEISAFYLTDFLVRQFDAFVWKPMGLDRHPQLRDMIF GNYTTLVYQAQTDDPALRAKAEACAARLGLTYEYRFTGYGDLKASLEKQAATH" gene complement(1583943..1584647) /locus_tag="RTM1035_07714" CDS complement(1583943..1584647) /locus_tag="RTM1035_07714" /note="COG5012 Predicted cobalamin binding protein" /codon_start=1 /transl_table=11 /product="corrinoid methyltransferase protein, putative" /protein_id="jcventer:1101493006649_RTM1035_07714" /db_xref="CDD:30208" /translation="MSDQDDDIILADLDDDELVQQMFDDLYDGLKEEIEESVHILLDR GWAPYRVLTEALVGGMTIVGKDFRDGILFVPEVLLAANAMKGGMAILKPLLAETGAPR VGKMVIGTVKGDIHDIGKNLVGMMMEGAGFEVVDLGINNAVEKYLDALETEQPDILGM SALLTTTMPYMKVVIDTLVEQGKRDDYIVLVGGAPLNEEFGKAIGADAYCRDAAVAVE TAKDFMARKHNRLAAS" gene 1584839..1585936 /locus_tag="RTM1035_07719" CDS 1584839..1585936 /locus_tag="RTM1035_07719" /note="COG1533 DNA repair photolyase" /codon_start=1 /transl_table=11 /product="Radical SAM" /protein_id="jcventer:1101493006649_RTM1035_07719" /db_xref="CDD:31722" /translation="MFQFGGMKPEQTLPNDLRVRARGALSNAAGRFEAYGVAYEAEDP GEAARVLRTQVTTERPRRVITYNRSPDLPFDRSINPYRGCEHGCIYCFARPSHAYLGL SPGLDFETRLIARPEAPARLEAELRARSYKIAPMAIGTNTDPYQAIEAEFGITRACLE VLQRFNHPVAVITKGALIERDLDILGDMAARGLARVGISITTLDEVLARRLEPRAPTP ARRLEIIRRLSEVGVPVRLMVSPVVPGLTDPEIEAILAAGREAGAGAASWIMLRLPRE VSPLFQEWLAAQYPDRARKVMNRLREMHGGQEYSAEWHRRMRGEGVHARMIARRFDLA ARRLGLDQAQAVLRTDLFEVPLARGDQLSLF" gene complement(1585918..1586163) /locus_tag="RTM1035_07724" CDS complement(1585918..1586163) /locus_tag="RTM1035_07724" /codon_start=1 /transl_table=11 /product="methionine synthase I" /protein_id="jcventer:1101493006649_RTM1035_07724" /translation="MMRRIFLAAALLALVAWIVGYIWISGLACAFGSPNGRCAFPMPW DMRGEDLMILVLFPAALVATLLVLARISGRRSQNSDN" gene complement(1586181..1587191) /locus_tag="RTM1035_07729" CDS complement(1586181..1587191) /locus_tag="RTM1035_07729" /note="COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain" /codon_start=1 /transl_table=11 /product="homocysteine S-methyltransferase" /protein_id="jcventer:1101493006649_RTM1035_07729" /db_xref="CDD:30991" /translation="MTNALTKMLATRDWILADGATGTNLFNMGLQSGDAPEMWNDQHP DRIKRLYTEAVDAGSDLFLTNSFGGNAARLKLHGAQGRARELSRISAEIGRDVADRYD RTVIVAGSVGPTGEIMAPMGALTHELAVEIFHEQAEGLKEGGADVLWLETISAPEEYK AAAEAFKLADMPWCGTMSFDTAGRTMMGVTSSDMATMVEKLGNPPMAYGANCGVGASD LLRTILGFVAQGSERPIIAKGNAGIPKYHDGHIHYDGTPELMAEYAVLARDSGATIIG GCCGTMPEHLSKMRAALENRPRGARPTLEEITEALGGFSSGGDGTGDDTAAPRRPRRR RG" gene complement(1587358..1587672) /locus_tag="RTM1035_07734" CDS complement(1587358..1587672) /locus_tag="RTM1035_07734" /note="COG2951 Membrane-bound lytic murein transglycosylase B" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07734" /translation="MTTFDDRESAFENKFAHDEEMAFRAVARRNKLLGLWAAELMGKT GDDANTYALEVVKADFEEAGHEDVVRKVASDLGDIADADTIRAKMDELLKIAKGQLAK EA" gene 1587835..1588596 /gene="purC" /locus_tag="RTM1035_07739" CDS 1587835..1588596 /gene="purC" /locus_tag="RTM1035_07739" /EC_number="6.3.2.6" /note="COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole-succinocarboxamide synthase" /protein_id="jcventer:1101493006649_RTM1035_07739" /db_xref="CDD:29596" /translation="MARRKKIYEGKAKTLYEGPEPGTIIQYFKDDATAFNAEKKAVIE GKGVLNNMLSEYFMTGLNTIGVPTHFIKRLNMREQLVRAVEIIPLEVIVRNYAAGTMA KRLGIEEGTQLPRPIVEYCLKDDKLGDPLVTEEHIAAFGWASQQDMDDILSLALRVND FMAGVMYGVGIKLIDFKIEIGRVYDGDFQRLIVADEISPDSCRLWDIASGRKLDKDVF RRDLGSLTDAYTEVATRLGVMPKGSTPMARPKLIN" gene 1588608..1588847 /locus_tag="RTM1035_07744" CDS 1588608..1588847 /locus_tag="RTM1035_07744" /note="COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component" /codon_start=1 /transl_table=11 /product="Component of phosphoribosylformylglycinamidine (FGAM) synthetase" /protein_id="jcventer:1101493006649_RTM1035_07744" /db_xref="CDD:32013" /translation="MKARVHVMLKSGVLDPQGEAVRHALGSMGFDGVEAVRQGKVIEL DLAETDAAKAKATVTEMCEKLLANTVIESYSVELA" gene 1588847..1589515 /locus_tag="RTM1035_07749" CDS 1588847..1589515 /locus_tag="RTM1035_07749" /note="COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase I" /protein_id="jcventer:1101493006649_RTM1035_07749" /db_xref="CDD:30396" /translation="MHAAVIVFPGSNCDRDLAVAFERAGARVSMVWHKDTDLPQGVDV VGVPGGFSYGDYLRCGAIAANSPICRSVIAHADKGGYVLGVCNGFQILTETGILPGAL LRNAGLKYVCKPVGLRVATADSVFSHGYEAGRTITVPIAHHDGNYFADTATLDRLEGE DRVAFTYTDNPNGSARDIAGILSENRRVLGMMPHPERMAEPLQGGTDGAALFSGLMGA LERA" gene 1589561..1591321 /locus_tag="RTM1035_07754" CDS 1589561..1591321 /locus_tag="RTM1035_07754" /note="COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transport sensor protein DctB, putative" /protein_id="jcventer:1101493006649_RTM1035_07754" /db_xref="CDD:33926" /translation="MSKAATSTARHRMRTISWRARAVLFCLFVVAVAVVLTTNRLLTD RFTENTRNRAELRLVLYSGNLLSELRQNAIVPQLLARDPALIAALNTQDYAQSTQRLI SFLEEIGAANLTLLDRDGRAVATTERARLGESHKAAAYFVDAMRSRDTIFHVLRQETG QFNFYYSRRIETQNGTLGVIVVEVDLRKYERAWAGISDAVMVTDTEGRIILATEPRWR GLTEAEALRREPVNSAIQRAIQATSDWTALPADAYVRGEAVMRVEGRVAFRGWRIAGF TTYTAVRDKVNGYLALEIMGFAILLALAFYFLNRKAALRMALFQRESAELRALNARLQ REIAERRRAQENLAQAEQTIQQSSKLAVLGEMSAAVSHELNQPLAAMKTYLAGARLLL SRNRPDEAISAFQRIDDLIERMGAITKQLKSYARQSGTQFSPVNMADAVASALSMMEP QLRQRKITITRTLPDQPVMIMGDRVRVEQVIVNLLRNAIDATNTVPDAIIDILLAAGE TAVLTVRDNGEGIGDFKNLFEPFYTTKQPGDGVGLGLAISSGIVNDLGGRLVARNAPD GGAVFEMQLPILAEETRAAE" gene 1591340..1592662 /locus_tag="RTM1035_07759" CDS 1591340..1592662 /locus_tag="RTM1035_07759" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="two component, sigma54 specific, transcriptional regulator, Fis family protein" /protein_id="jcventer:1101493006649_RTM1035_07759" /db_xref="CDD:32386" /translation="MKIAIVDDEKDMRQSISQWLALSGYDTEAFASAEDALKSLGPDY PGIVVTDVRMPGMDGMQFLKKLMGADSSLPVIMITGHGDVPMAVEAMRIGAFDFLEKP FNPDRMTELAKKATNARRMTLDARALRKDLSDGGQLMKKLIGTSNAMERLREDILDLG QADGHVLIEGETGTGKTLVAHALHAVGARAGRKFVSVACAAFDDEGLIKRLFGPVQPE DARLPAFEEARGGTLVLEDIEALSEAAQAKLLTHINAEGTPPETRVVAISNMQDEGHT CEDALRSDLFYRLASLRITVPPLRQRGEDILTLFTRFAEQFSEDYGCDAPQVSAQEAT QLLQAPWPGNVRQLFNVAERAVLQARRGSGTITSLLMSDHQDMQPVMTTEGKPLKEYV EAFERMLIDNTMRRHKGSIAAVMDELCLPRRTLNEKMAKYNLQRSDYL" gene 1593051..1595588 /locus_tag="RTM1035_07764" CDS 1593051..1595588 /locus_tag="RTM1035_07764" /note="COG1530 Ribonucleases G and E" /codon_start=1 /transl_table=11 /product="ribonuclease, Rne/Rng family protein" /protein_id="jcventer:1101493006649_RTM1035_07764" /db_xref="CDD:31719" /translation="MQTENMATKMLIDATHAEETRVVVVDGNKVEEFDFESENKRQIA GNIYLAKVTRVEPSLQAAFVDYGGNRHGFLAFSEIHPDYYQIPVADREALMAEEEALA NAQNDEDEDRPRRSSGGEGRSDGRSEGRNSRSRSRSRSRTRAEKTQTDDAVATSEISG METIDLEDETAATAEVPEATSPMERVAETPVEEPEDNGADEAGEDEPETDTRDHAAQD DEIESVAEEDDSEDIRPVRKPRARRYKIQEVVKVRQIMLVQVVKEERGNKGAALTTYL SLAGRYCVLMPNTARGGGISRKITNAVDRKKLKEIATEIDVPRGAGLIVRTAGAKRTK AEIKRDYEYLQRLWEQIRELTLRSMAPAKIYEEGDLIKRSIRDLYNREIDEVLVEGER GYRIAKDFMKMIMPSHAKNVKHYVDQQPLFARFQVESYLSGMFNPTVQLKSGGYIVIG VTEALVAIDVNSGRATKEGSIEETALKTNLEAAEEVARQLRLRDLAGLIVIDFIDMDE RRNNASVEKRLKDKLKTDRARIQVGRISGFGLLEMSRQRLRPGMIEATTQPCPACHGT GLIRSDDSLALSILRQIEEEGVRRRSREVLVKCPVGIANYLMNQKRDHVAQIEGRYGL SVRIEGDPRLVSPDFTMEKFKTATRNVPEVPMAQFVSGTSALMDDIDDEVEDEIDEEV EAEAGDDAKSAPTTGGDGGDKPKKSRRRRSRRRKPKNGNGAERNGEGTDEDREDDDAE ASEGSEEQDSAVPAVAAEPEAPVEAPVEAPAEVTAEAEAPVVAEEQPKPKRTRAPRKK KEPASAAEAVSDEEAPKAKAAAKPKRTPTPRKKKSPRPRRRLQMRAA" gene 1595585..1595800 /locus_tag="RTM1035_07769" CDS 1595585..1595800 /locus_tag="RTM1035_07769" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07769" /translation="MTAAPEAAVVPTEAPPEPVAEVAPEPVAEVTPEPVAEAEAPEPA QAPEPVAETPAPQEEPKPKRRGWWSLG" gene complement(1595985..1596215) /locus_tag="RTM1035_07774" CDS complement(1595985..1596215) /locus_tag="RTM1035_07774" /note="COG0425 Predicted redox protein, regulator of disulfide bond formation" /codon_start=1 /transl_table=11 /product="SirA family protein" /protein_id="jcventer:1101493006649_RTM1035_07774" /db_xref="CDD:48205" /translation="MTPDDTLDACGLLCPLPVLKLRKRLKSLGIGAVIAMQADDPAAV IDVPHFCAESGHDLISATDANGVQTYVIRKTR" gene 1596267..1597061 /locus_tag="RTM1035_07779" CDS 1596267..1597061 /locus_tag="RTM1035_07779" /note="COG0785 Cytochrome c biogenesis protein" /codon_start=1 /transl_table=11 /product="putative cytochrome c-type biogenesis protein CcdA" /protein_id="jcventer:1101493006649_RTM1035_07779" /db_xref="CDD:42644" /translation="MSGDAGRSAGYVWRMFGIEIIDAALLPAMFVALAAGIISFLSPC VLPIVPPYLAYMSGVSLNDLSESGQSRARAVVPALFFVLGLSTVFIFLGFTASAIGTV FLQYQSYFNTVAGILVMIFGAHFVGVYRIKFLDREARLDAGDRGGSSFGAYILGLAFA FGWTPCIGPQLGAILSLAASEGSVARGTMLLAIYAIGLGVPFLLVAAFLPRLQGLMGW MKRHMEQIERVMGLLLWTIGLLMLTGGFSAFSFWLLETFPALAVLG" gene 1597116..1598318 /locus_tag="RTM1035_07784" CDS 1597116..1598318 /locus_tag="RTM1035_07784" /note="COG0593 ATPase involved in DNA replication initiation" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07784" /translation="MSSEPQVRRRRVFYIPGYDPIPPRRYRELYRKESAEQAVISGYE INVLQAKAQARFGWNVSAQIEGAEVESAVEVLVWSDIVKGSMDQGILATYVQLIRTAA IYIGTGALFRLMRLRKGPVIAALYPVGFLLVQLGIAFMVAWGLGRVLALWHPWAAWGG LGVVPFILEWFRRLDGRFFAYYLMHDYAYSARYLGANPPELEARMAEFTAEIAQALQG DCDEVLVVGHSSGAHLGVSILADLIRGGQVPKHGPALSFLSLGQVVPMVSFLPRAYRL RADLAYLSARDEVTWVDVTAPGDGCAFALCDPVAVSGVAPKDKRWPLVISAAFTQTLS AERWRALRWRFFRLHFQYLCAFDRPGDFDYFRVTAGPLTLAARFRDRPPSKSRIERAT SRYTSLAP" gene 1598315..1599676 /locus_tag="RTM1035_07789" CDS 1598315..1599676 /locus_tag="RTM1035_07789" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="cytochrome P450 family protein" /protein_id="jcventer:1101493006649_RTM1035_07789" /db_xref="CDD:40168" /translation="MIPPKPPARPDHVSLWRYLRLFRADILSAQPARLYRAWMAEFRT PFFRSYLCNDTGLVDLVLKQRPDDFPKSARVSEGLRPLLGQSVFVTNGETWKRQRRII DPAFEGGRLRDTFAAMVTAGQGAVARLAPLADGSGFDIEGHTSHAAADVIFRTLFSLP IEDRTAAQVFDAFKAHQRMQPVLNLAAFVPLPGWFPRFHRRQTRVTARAIRGLITELT ARRQAEIAAGTAPDDLATKIMTTADPETGARFDTEEMVDQVAIFFLAGHETSASALAW ALYLLALYPEWQERVAEEAEAVFGPRVPEFSDMARLRVTRDVFRETLRLYPPVPMMVR ETACPERFRDRDIPRGAQVVISPWHLHRHERLWDNPDGFDPARYGTENGKTCLREAFI PFSAGQRVCTGAGFAMIEGPLLLAMLVRAYRLSPVAERPPVPVAHLTVRGRDGIWLKL SPR" gene 1600123..1601376 /locus_tag="RTM1035_07794" CDS 1600123..1601376 /locus_tag="RTM1035_07794" /note="COG2059 Chromate transport protein ChrA" /codon_start=1 /transl_table=11 /product="Chromate transporter" /protein_id="jcventer:1101493006649_RTM1035_07794" /db_xref="CDD:32242" /translation="MSAPPLALIFRSFARIGLLSFGGPAAQISMMHDELVERRGWLTE QQFLGALSFCMLLPGPEAMQLCTYAGWRLRGVLGGLIAGLLFVLPGAAVILVLGLGYA TYGDLPLVQAVFLGIKAAVVVIVLQALLKLARRALKGWDSWVLAGLGFVAMFFLSVPF PLIIAAAALWGAWSHRGVAVDASMVAPVPVALSQTVATALIWGALWAAPVLLVWGTGA TFLTDLALFFSKLAVVTFGGAYAVLAYMTETVVATKGWLTTAEMIDALGLAETTPGPL ILVTEFVGLLAGYAQGGVGMAVLAACLTLWVTFIPCFLWIFTGAPYIEQILARPRLKG ALAGISAAVVGVILNLSVWFALHVLFGQVTMGAFGPQPEISSFSLRDAVYVAVAGGLL LGLRLPMVPVLVLMAALAGLAHVLI" gene 1601481..1601906 /locus_tag="RTM1035_07799" CDS 1601481..1601906 /locus_tag="RTM1035_07799" /note="COG3814 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07799" /translation="MHRAMRGLIQEVLSKVQAEGLPGAHHFFITFDTKHPEAKLADWL KQRYPSEMTVVMQHWYDDLKVTNDGFGVTLNFGDAPERLYVPYDSIQTFVDPSVEFGL RFETQEVDDDIDELDDTDPPDDDPSPGKAEVVRLDSFRK" gene 1602014..1603405 /gene="fumC" /locus_tag="RTM1035_07804" CDS 1602014..1603405 /gene="fumC" /locus_tag="RTM1035_07804" /EC_number="4.2.1.2" /note="COG0114 Fumarase" /codon_start=1 /transl_table=11 /product="fumarate hydratase" /protein_id="jcventer:1101493006649_RTM1035_07804" /db_xref="CDD:28776" /translation="MTATRTETDSFGPLEVPNDKYWGAQTQRSIMNFPIGWEKQPVAI VRALGVIKQACAQANKASGALDARRADAIIQAAGEVIAGKFDDNFPLVVWQTGSGTQS NMNANEVIANRAIEILGGVIGSKDPVHPNDHVNMGQSSNDTFPTAMHIAAAMTARDVL LPGLAKLLAGLEAKSEEFKDIIKIGRTHTQDATPLTLGQEFSGYAHQVRQGIARVNLC LPGIYELAQGGTAVGTGLNTAKGWDTTVAAQMAEITGLPFVTAPNKFEALAAHDAMVF MSGALATVAGSCYKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQAEALT QVAAHVMGNDAAIKFAGSQGHFELNVYNPMMAYNLLQSMQLLGDAADSFTERMLNGIE ANGPRIEKLMQESLMLVTALAPTIGYDNATKVAKTAHKNGTTLREEAIALGFVDGETF DRVVRPEDMIGPK" gene 1603402..1603584 /locus_tag="RTM1035_07809" CDS 1603402..1603584 /locus_tag="RTM1035_07809" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07809" /translation="MSDAPVNLNRVRKQKARAKDKARADENAARFGRTKAQKALEQAQ TEKARATLDQHRRDED" gene 1603667..1603903 /locus_tag="RTM1035_07814" CDS 1603667..1603903 /locus_tag="RTM1035_07814" /note="COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07814" /db_xref="CDD:34043" /translation="MMGARPVKRSLTLRGHRTSVSLEDEFWQAFREIAEEKSMALNVL AAEIDAGRGIETGLATAIRLFVLAYYRDRALLNG" gene complement(1603952..1605787) /locus_tag="RTM1035_07819" CDS complement(1603952..1605787) /locus_tag="RTM1035_07819" /note="COG1292 Choline-glycine betaine transporter" /codon_start=1 /transl_table=11 /product="glycine betaine transporter" /protein_id="jcventer:1101493006649_RTM1035_07819" /db_xref="CDD:42036" /translation="MSIKPPFTDLEIKTAPQGFYEGYSLPIALISKTSMALLVIWALV WPLNANATLSSLNWSLLEGFNTFYILATGMFAFFLFIVALLPATGRRMMGRVGEKPEF SNFSWFSMMFGAGLGVGLMVFATAEPLGLWGSNPETVTGAVIGNTAEGVTPAYRYTFA HYGFHAWAIYVVTGLSLAYYAYTRDMPLTIRSALTPLLGRAANGILGDLVDILGVVAT ILGVSVTIGFGVSQFVDGVYAVSGMEWLMNTTGEAPKPTTAGLIAALLAIMGLSILSA VSGVGRGIKYLSNLNLVLSVVLLLVFIVFGSFAFAMTKYATALADYILHFTSLSFNAY GPLSSEAFAAALPTEAAPLAADLYGGATNAWGSFDGFVGGLSGAAAELPEATKIAAYE AGAQGRLFGWQAGWTTFYWAWWIAFSPFVGLFLARISKGRTVREFILGCVIAPALVCF AWMTILGATAIDLELSGVAQGAIIGASNTNKLFVTLGFMIDGGLLTAVTIMCVVLVLT FLVTSADSGILVMNTIMSGGQAETGIKHRIIWGVILTLVIGALIIAGNSGASADPFEA LKNAMIIGALPFAMVMVLMVVALTKALYRDHLRDKHGLLAEQPAE" gene 1606293..1608002 /locus_tag="RTM1035_07824" CDS 1606293..1608002 /locus_tag="RTM1035_07824" /note="COG1292 Choline-glycine betaine transporter" /codon_start=1 /transl_table=11 /product="choline/carnitine/betaine transport" /protein_id="jcventer:1101493006649_RTM1035_07824" /db_xref="CDD:31483" /translation="MADETTNQGIPAPEGQSDLIETVYEIGQDNVQPQVGPFGLDIHN PVFFISGLSIVIFVFYALALPGHAASVFDWLFASVTQGFDWFFLSAANVFVIFCLFLI VSPYGRVRLGGDEATPDYSYLGWFAMLFAAGMGIGLMFFGVSEPMSHFSSALGGTAME DGARSDWAPLGAAGGDPEAASRLGMAATIFHWGLHPWAIYAVVALALALFSYNKGLPL TLRSAFYPILGERVWGWWGHVIDTLAVFATLFGLATSLGFGAEQAASGLTFLYGSGDA AEGTRAFLGISYGNTEESSVENSSLLLVLLISGITAIALVSVVRGLDGGVKVLSEINM GLAALLLLFVFFVGGPIFLLTFFFDSLWAYLQNLVALSNPFGREDTNFMQGWTAFYWA WWISWSPFVGMFIARVSRGRTVREFVICVLLIPSLVCVLWMSVFGGTALNQVIAGGYE AAQNAPLELKLFQMLDPLPLATITSTIGIVLVVVFFVTSSDSGSLVIDTITAGGKVDA PVPQRVFWCIFEGAVAIVLLIGGGLTALQSAVISTGLPFTLVLLVMCWAIFRGLQSER KIL" gene 1608098..1609318 /locus_tag="RTM1035_07829" CDS 1608098..1609318 /locus_tag="RTM1035_07829" /note="COG0520 Selenocysteine lyase" /codon_start=1 /transl_table=11 /product="aminotransferase, class V" /protein_id="jcventer:1101493006649_RTM1035_07829" /db_xref="CDD:30866" /translation="MTLDTDFVRAQFPAFAEPSLEGQAFFENAGGSYTCGPVIARLER YYRQRKVQPYAPYEASQLAGAEMDEARARLAAMMGVATDELSFGPSTTQNTYVLAQAF RQWMEPGDAIIVTNQDHEANSGPWRRLADAGFEVREWKINPESGLLDPADLENLLDDR VRLVCFPHCSNVVGAINPVVEITALAHAAGAFVCVDGVSYAPHGLPDVGGMGPDIYLF SAYKTYGPHQGIMVIRRELGNLLPNQAHYFNAGTLYKRFTPAGPDHAQVAASAGMADY IDDLAAHHGITGDAVTRAVGVHDLMRGHETALLQPLLDFLKDRNSARLIGPVEAEQKA PTVAVALNRPGAEAAAQLAQHGIMAGGGDFYAVRPLTAMGVDPERGVLRLSFVHYTTR TEVDKLLTALDDIL" gene 1609367..1610788 /locus_tag="RTM1035_07834" CDS 1609367..1610788 /locus_tag="RTM1035_07834" /note="COG0415 Deoxyribodipyrimidine photolyase" /codon_start=1 /transl_table=11 /product="Deoxyribodipyrimidine photolyase" /protein_id="jcventer:1101493006649_RTM1035_07834" /db_xref="CDD:30764" /translation="MTDIAPSIVWLRRDLRLADHPALCAALAGGGAVIPVFIHDESVE ALGAAPKWRLGLSLASLARDLAACGSRLILRRGAALDVLRALVAETGAGAVHWSRLYD PQSIARDKAVKSALREAGVDAQSHPGHVMFEPWTVETKTGGFYRVYSPMWRAVKDRDV AVPLTAPGQIPAPKVWPASDSLDDWQMGAAMYRGADVCLPYQRVGEAAAMERLHAFAD GAIAEYQDARNFPAVDATSALSENLTYGEISPRQCWHAGQRALHGGAKGAETWLKELV WREFAYHLMYHTPHILSGNWRTDWDAFPWSTDADHPEVIAWKQGRTGEPFVDAAMREM YVTGKMHNRARMIVASYLTKHLMTHWKIGLDWFAECLTDWDPASNAMGWQWAAGCGPD AAPYFRVFNPETQLDKFDRGGAYTRRWIAEGQRTPPATALDYFKAVPRAWQLDPSMLY PGRIVDLSQGRQRALNAYEAREF" gene 1610792..1612063 /locus_tag="RTM1035_07839" CDS 1610792..1612063 /locus_tag="RTM1035_07839" /note="COG2230 Cyclopropane fatty acid synthase and related methyltransferases" /codon_start=1 /transl_table=11 /product="Cyclopropane-fatty-acyl-phospholipid synthase CfaS" /protein_id="jcventer:1101493006649_RTM1035_07839" /db_xref="CDD:32411" /translation="MTILTARSAIDAPQKEKGTERMILTDTTGQTGLPRYFSRCFGVA RNIDAGRLDIRLPDGRVFRAEGPRPGPVAVLEIHDTEVFARLVREGYLGFCEAYLDGD WSTPDLQSFMDLLNDDNDGIYNGYPGQRLAQIYERIRFWFKRNSKTQAKRNISYHYDL GNAFYSLWLDETMTYSSAIFQPGQNSLEQAQIAKYASMVDQMGVKPGDHVLEIGCGWG GFAEYAAKERGLRVTGLTISAEQLKYAQDRIARAGLSDRVTLKLQDYRDERGTYDGIA SIEMFEAVGERYWPVFFNSLRERLNPGALATLQIITVEDRRWESYRTDVDFIQKYIFP GGMLPSPTALRAEIERAGLSVARSIEFGESYSQTLRRWHQAFNDKWDEIADMGFDDRF RRMWNFYLTSCAGAFKGGSCDVTQITIARPG" gene 1612064..1612522 /locus_tag="RTM1035_07844" CDS 1612064..1612522 /locus_tag="RTM1035_07844" /note="COG0422 Thiamine biosynthesis protein ThiC" /codon_start=1 /transl_table=11 /product="tellurite resistance protein" /protein_id="jcventer:1101493006649_RTM1035_07844" /translation="MPVTDQMPTAARLVAAIGLSIVGWFGSELFRPLMPEDTNFGWFN VVNVVLGAICGWRVTGRRLGYGYAEGFSAGLTGVAALVFWALFLQSLNEMLKRALDNR YDGVIKGLTAMFDLMVDYGMTMINGPLIGALVTGGIVVGLVSEWVSHRWS" gene 1612498..1613619 /locus_tag="RTM1035_07849" CDS 1612498..1613619 /locus_tag="RTM1035_07849" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="Tellurite resistance protein" /protein_id="jcventer:1101493006649_RTM1035_07849" /db_xref="CDD:40389" /translation="MGLASVVVTPVFLYGPLADITVLQAALPGLVAAEARAEGVQICC DDAPLPLAGLRRGLGAVDGWLVSEPHTVELVTFIAEALGLGRSDVITVSQDGRPVAAR VFPGRPGPMDWDGQDWSRRAAPILRYAVQEILSLRGRIAAQDLCAGLPMILSRASGRV AAQTPAPADVRSATEAATVQEIACEITHAGFFLGRAYTLRHPRFDGTPSDTLRREVFV ATDAALVLPYDPVRDRVLLVEQFRMGPYGRGDPRPWMLEPVAGRIDGGESPEHAAHRE CLEEAGLTLRALEKISQHYCTPGYSTEFFHLFLGICDLPDLEQGRGGLATEHEDIRTH VIDFAQAMALVQSGEANNGPLILCLLWLERERARLRASA" gene 1613678..1614709 /locus_tag="RTM1035_07854" CDS 1613678..1614709 /locus_tag="RTM1035_07854" /note="COG0031 Cysteine synthase" /codon_start=1 /transl_table=11 /product="pyridoxal-phosphate dependent enzyme" /protein_id="jcventer:1101493006649_RTM1035_07854" /db_xref="CDD:30381" /translation="MRIAQDLAAAVGNTPLIRLRRASEETGCDILGKCEFLNPGQSVK DRAALFIIRDAIARGDLKPGGTIVEGTAGNTGIGLALVGASLGFKTVIVIPETQSQEK KDMLRLAGADLVQVPAAPYSNPNNFVRYSERLAAELAKTEPNGVIWANQFDNVANRQA HIETTGPEIWEQTGGKVDGFICAVGSGGTLAGVGMALQPKGVKVGIADPMGAKLFSWY TKGELESEGSSIAEGIGQVRITANLEGFMPDFACQVPDAEALPIVFDLLQHEGLCMGA STGVNIAGAMQMARDMGPGHTIVTILCDYGTRYQSKLFNPEFLRANNLPTPDWLDQAP RSIPGVFAG" gene 1614715..1617126 /locus_tag="RTM1035_07859" CDS 1614715..1617126 /locus_tag="RTM1035_07859" /note="COG3264 Small-conductance mechanosensitive channel" /codon_start=1 /transl_table=11 /product="Small Conductance Mechanosensitive Ion Channel" /protein_id="jcventer:1101493006649_RTM1035_07859" /db_xref="CDD:33075" /translation="MLRLLCLVLCLALGAAVAVPDTALAQGQHTPDAVDYVTWEELAA DADEMLANGEASTGQLENMRAQINGWRQQFVEMQGLNSTAIRTVRDQIAALGPVPETG EEAEDIAAQRAELNRRLARLEAPVKLADLARSRADGLVTNIDGAIRDRQTQALLRLGP SPVNPLHWPTAVKELYRAVDTVRAETATNWQSSFRRTRFQGNLPGVIALGLIGLLLMT RGRVWTMRLAARVLGDTPTAGRRLAAFAISFGEWLLPYLGVISIVVAGVLTGILGSKG NLVLESLPAAAFILLLARWLSLRVFPRDDRQLPLLTLGPSERATGRLSGGSLGLVVAG FAYVQDLADGFDWSEAARNVMIFPLMVLASLLLLRLARLLMRHSKAAANEPETELTFR SKLVRILARALWALALLAPLLSAIGYMSAAEAMMLPALLSLMMIAALLLVQRVLSEVY IMLRGNAQSIDDSLFPVLLGFFLVLGSVPVFALIWGARPAQLQEAWLSFTQGVSFGGI TLSPTGFLILAVVFTLGYLLTRLIQGTLKNAILPKTKLDMGGRNAIVSGVGYVGIFLA ALVSITAAGIDLSSLAIVAGALSVGIGFGLQNIVSNFVSGIILLIERPISEGDWIEVG GQHGYVRSISVRSTRIETFDRTDVIVPNADFVSGTVTNYTRGNTVGRVIVPVGVAYGT DTRRVEKILRDVAEAHPMVLMQPPPTVLFQNFGASSLDFEIRAILRDVNWVASVKSDM NHEIARRFAEEGIEIPFPQQDVWFRNATAEAKEPKAPVKPKTSQSPAALTEGDVEGEG DGDGR" gene 1617123..1617842 /locus_tag="RTM1035_07864" CDS 1617123..1617842 /locus_tag="RTM1035_07864" /note="COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07864" /db_xref="CDD:32699" /translation="MTTPLFRLDAYQTEAAGVVVAHTPEGGIVLDQTLFYPMGGGQPG DSGRLMCQGRSLPIATAVKAEGEQIALVMAEPMALPPIGTALRQAIDWPRRHRLMRMH TALHLLSVVIPLPVSGGAVAETRSRLDFDMPEAPEDRETLEDYLNQLVDQDLPVTEEW ITDDALRANPGLVKTMSVAPPMGSGRVRLVRIGQGTDQVDLQPCGGTHVARTGEIGRL RLGKIEKKGRHNRRVYLHLED" gene complement(1617849..1618529) /locus_tag="RTM1035_07869" CDS complement(1617849..1618529) /locus_tag="RTM1035_07869" /note="COG1794 Aspartate racemase" /codon_start=1 /transl_table=11 /product="aspartate racemase" /protein_id="jcventer:1101493006649_RTM1035_07869" /db_xref="CDD:31979" /translation="MRTVGILGGMGPEATVLLMQKLLAAVPARDDSDHIPLIVHQNSQ VPSRIKALIEGTGEDPGPVLARMACDLQAAGAEALAMPCNTAHHYAPAVVAATPLPFL NMLDLTAQSLARQGARRVGMLASPATRLANVFAAPFAAHGLTPVFLPDDSGILAIIRA VKAGEPLATLKPQLAQEAEALLAHGADHLLVACTELSLMTDALPATAPHTDSLDCLTQ AIADFAKG" gene complement(1618539..1619834) /gene="hisD" /locus_tag="RTM1035_07874" CDS complement(1618539..1619834) /gene="hisD" /locus_tag="RTM1035_07874" /EC_number="1.1.1.37" /note="COG0141 Histidinol dehydrogenase" /codon_start=1 /transl_table=11 /product="histidinol dehydrogenase" /protein_id="jcventer:1101493006649_RTM1035_07874" /db_xref="CDD:40893" /translation="MPITPLKTAPGEPPHTAHDVADTVQIMLARLRTGGAQVALEYAR QLDGWQGGITVTHAEVAAAVSRVPASLKADIQWAHDNISRFAAAQRATAQDMEIELRP GLRAGQRQIPLGAAGCYVPGGRYSHIASALMTIATAREAGVADITAVSPPCGDQGIPD AMLYAMDLAGATRILTIGGVQGVAAMAFGLFGAPPADILVGPGNAYVAEAKRQLFGPI GIDMFAGPTDSLILADDTADPETVAADLVGQAEHGANSPVWLATTHRPLAEAVMVRAP ALIASLPEPNRAAATAAWRDLAEVVLCDTPEDMAQYADAKAPEHLHVQARDLPWWRTR LQAYGSLFLGENTTVAFGDKAAGPNHVLPTSGAARYTGGLSVHKFLKTVTWQEVDDRA LPDLARVTASLSRAERMEGHARSADIRTGPIDRAATSTG" gene complement(1619965..1621020) /locus_tag="RTM1035_07879" CDS complement(1619965..1621020) /locus_tag="RTM1035_07879" /note="COG0628 Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07879" /db_xref="CDD:30973" /translation="MAQIIIAFAVVLFLLVQARFLLISLATAIILFSLTSDAITSIAR VRLGPVRVPNWLASIVALLLISAALLSLSAVILSQINTVLSTTLAYTDRAPQAISAMV AWLGPDAEEAVFNAVSTLDVAGYLRALAGQAGGIMQGTVLVILFVGFLFAERIWFTTK LESLFGDAKKAERVGRIISSIIHRVNYYLLVKTLVSVVTGLMVYGVAQFFALDLAGAL GILTFVLNYIPSIGSIVATVLVALVAYVQLADGTTALVIFLIVGIIQFINGNIIDPML MGRALRVSSFGIIISLAFWAAVWGIPGMFLAVPIMVALMIVCSHVPGFRAIAVLLSRE GLPETDQDLDAPKRRRG" gene complement(1621219..1622979) /locus_tag="RTM1035_07884" CDS complement(1621219..1622979) /locus_tag="RTM1035_07884" /note="COG2303 Choline dehydrogenase and related flavoproteins" /codon_start=1 /transl_table=11 /product="glucose-methanol-choline oxidoreductase" /protein_id="jcventer:1101493006649_RTM1035_07884" /db_xref="CDD:32458" /translation="MQGREKSKALDIDLPQGSVGKLSGLAFSGIPGRGRICNAGARAK GKGRRNVTDHDYIIVGAGSAGSVLADRLSANGRHRVLILEAGGRGRSPWIALPLGYGK TFFDERLNWKYEAEPEEALDGRRGYWPRGKTVGGSGAINAMVYARGLPHDFDDWEAAG ATGWGWSTVRATYDALETQVSADGTRRGSGPITVQDVSDQIHPVNRHYFAALDELGLP RTDDLNDPSGEGGTVYRINTAGGLRNSSARACLKPALKRPNVTLVTGALVDRLEFDGS RAVAVHYRRGGQSHVARAGREIILSAGAVTSPRLLQLSGIGPAEMLRQHGITPLRDCA HVGGNLQDHLGINYYFRATEPTLNNDLAPFMGKVRAALRFALTRRGPLSLSVNQCGGY FRSKPGQNHPDQQLYFNPVTYTTTPAGTRSVVRPDPFPGFIISFQPSRPTSRGRIDIS GPNPEAPPLIQPNSLATEEDRAQVIAGGRLCQRIMSTAALTALVESAMYQDLRTMDDA TILDDFRKRCGTVFHPVGTCRMGRDPAQSVVDPQLRVHGVTGLRVVDASVFPNVTSGN TNAPTMMLAWRAADLILGDA" gene 1623031..1623117 /locus_tag="RTM1035_t09476" tRNA 1623031..1623117 /locus_tag="RTM1035_t09476" /product="tRNA-Ser" gene complement(1623190..1623573) /locus_tag="RTM1035_07889" CDS complement(1623190..1623573) /locus_tag="RTM1035_07889" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="putative MarR-family transcriptional regulator" /protein_id="jcventer:1101493006649_RTM1035_07889" /db_xref="CDD:47674" /translation="MYRFDSWAASELGLHVTDLRCVNALENGPLTAGEIGGRLALTSG SVTALINRLVRAGFVERIEDAHDRRRAKIALTSKFRANADRVYSCLGRAISAEFAQCS PAESLAAINTIEKLEAGFSVTLHRD" gene complement(1623694..1623978) /locus_tag="RTM1035_07894" CDS complement(1623694..1623978) /locus_tag="RTM1035_07894" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07894" /translation="MLAALVHANRRPSITLDIGRPGHMTLTVATLFRRRTRRIRPDDV MGIAVSEREDQDGDPYFRAIVSFMDDRQCVVADGHHRNVIDRTAAMVSDA" gene 1624252..1624680 /locus_tag="RTM1035_07899" CDS 1624252..1624680 /locus_tag="RTM1035_07899" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07899" /translation="MWHYRYEEDTPLTCEDLWPVLADVARWPEVDRNIECLKIDEEPG LGVTFVLKPKGGPRLNFVIGEFEAPSRYADVCRMPLAVMRTRHTLIPDGLGTRIRVDI EITGPLAPVWGRVVGRRHAAGLPAQTARFIEGARARLNLA" gene 1624703..1625062 /locus_tag="RTM1035_07904" CDS 1624703..1625062 /locus_tag="RTM1035_07904" /note="COG3695 Predicted methylated DNA-protein cysteine methyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07904" /db_xref="CDD:33491" /translation="MRRALLRYLGEIPVGSVVEVATLAEALKLPARHVAHILSRLGDD EAELLPWHRVIPRGGAFTKAQMGRPRTIRQIGLLQAEGVPFVDGDRLNMASVTCWQPP DTHLSTFWADLEDDEPA" gene complement(1625391..1627046) /locus_tag="RTM1035_07909" CDS complement(1625391..1627046) /locus_tag="RTM1035_07909" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="5'-nucleotidase" /protein_id="jcventer:1101493006649_RTM1035_07909" /db_xref="CDD:31825" /translation="MTTYFIVLRELGINESDNLSGANIALPDSFDATVDALIDGFGAV PFRVAAETLPTVLAARNGIDGVLVPEELLLGVDPIDFSQLSVATFRVDDGFFSGDGAF VLIPSELPVPPNTETGEPNTNEETPIDSEGGTSTRIYLLSRDGALSDTSAIAGLKIAV EADVDDSVMTRLSNLGAIPIRIAVAEHYQALQTGVVDAVVLTESRLLGDIGTSLLADF DLDVYLVDDSFFTGILAGSVATTELPGNGGPDTGGPDEPNPPPPDRFLEGSGGNDTLR GGEGNDTIAGGDGDDSIEAGGGNDNISASDGNDFVDAGAGNDSVGGGLGNDTIFGTTG DDVMGAGFGDDVVSGGLGNDVVAGGAGNDTLEGGDGNDSMSGSFGNDLISGGDGADDI GGGTGRDTIDAGAGNDRVGGGEGDDSIQGGAGNDFLAGGGRNDTIDGGSGADTINGGA GNDRMTGGAGADQFVFSAFNEGETDVITDFQDGIDRLFIRIINPDTGETNITNGNAGL SGFVAALGILDTAAGAQLNVNGHRVLIEGMAAADLTVDDFQFL" gene complement(1627323..1627646) /locus_tag="RTM1035_07914" CDS complement(1627323..1627646) /locus_tag="RTM1035_07914" /note="COG2076 Membrane transporters of cations and cationic drugs" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07914" /db_xref="CDD:32259" /translation="MAWIYLVLAGLLEIIWAFSMKKSMGFTLLIPSAITIGTMIASFA LLAVAMRSLPLSTAYTVWTGIGAIGAFTVGVLVLGESASPTRLIAAALIVSGIVLMKI SSSTA" gene complement(1627906..1629414) /locus_tag="RTM1035_07919" CDS complement(1627906..1629414) /locus_tag="RTM1035_07919" /note="COG0728 Uncharacterized membrane protein, putative virulence factor" /codon_start=1 /transl_table=11 /product="integral membrane protein MviN" /protein_id="jcventer:1101493006649_RTM1035_07919" /db_xref="CDD:31072" /translation="MLRKLGTVSGLTLVSRLLGFLRDVVLAATLGAGPVADAFMLAFR LPNHFRALLAEGAFNAAFLPTWAAADASGRDSARLGAEVLGWLMLANLVLLSLALGAT GWMLAVLAPGLSPADETWQLVVTLTRITFPYLLCMSLVAFLAALLNGRDHFAAPAAAP ILLNLCMIGALLMAQHFPSTAHAAAWGVMVSGVAQVILLAGAAGRAGLPLPRPRLGLS PDTRLVFRRLGPAILTSGALQVAIFADTIIATFLPSGSLSHLYYADRLYQLPIGLIGV ALGTVILPDIGRRAGLGDEMGMRAVLDRALLICLAVGVPVAVMMATLGDWALRILFVR GAFDLAAAEASAAILAAYALGLVPALALRSLVAGFHGRGDTRTPLRLLVAATVVNIAL KIALTPWLGAAGLAVATSAGIALYAALLFQTGRTRGFLTGPSARSSAILIASGAVSAL AIWWWRDAILDALVAVGPAGGLLTAFLVVVSLSGAFHGAATFVALKVGHTRP" gene 1629548..1631323 /locus_tag="RTM1035_07924" CDS 1629548..1631323 /locus_tag="RTM1035_07924" /note="COG0471 Di- and tricarboxylate transporters" /codon_start=1 /transl_table=11 /product="Probable sodium/sulphate symporter" /protein_id="jcventer:1101493006649_RTM1035_07924" /db_xref="CDD:29729" /translation="MSLDQIFVLALVAVVFLSFVKEVYPPEVTALAASAALLATGIIE TRDFLTVFSSSAPITIAMMFIISAALERTGVLTIVGDLLKQQARGSFLRAMLLMMVGT MGASAFMNNTPVVILLTPIMISVAASVGVAPSRMLIPLSFAAIFGGTLTLVGTSTNIL MSGVAQEAGQPSITMFEMTLPGLIFAGVGMAYMIFAGRFLLPDRASLSGLLGQEGKRR FLARLLIPNGSKYVGRRLSDLPFNTAETRILDVVRGEVSMRRTMHDLVLEVGDRLVLK TGTGEILGLKEDGQIAFRDRDDHDVEPVTADQTITMEASVGPNSHLRGRPIKDLKLRR KYGVYLMAVHRQEQNISEELQDLRLQFADTLLLEGPPEGLQRMMEDGGIVNLSTPTER PQRRSKAPIAIATILAVMGLAAFDVMPIAGLAVIGAVVVMMTRCVDPEEAFDAIDWRI LFLIFGMLGLSMGMEETGTARVIVEAVVGAVGGIGPLAILAAVYVLTSALTEMVSNNA VAVLIGPIVIALAIELGFDPRPFIMAVMFAASASFATPIGYQTNTFVYGAGGYKFTDF IKVGLPLNIIFAVVAVLIIPIFFPF" gene complement(1631855..1632304) /locus_tag="RTM1035_07929" CDS complement(1631855..1632304) /locus_tag="RTM1035_07929" /note="COG1959 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="Transcriptional Regulator, BadM/Rrf2 family protein" /protein_id="jcventer:1101493006649_RTM1035_07929" /db_xref="CDD:32142" /translation="MITHKTKYALKALMVLADEKAGEGVALRIEDIAARSGAPKRFLE HILLDLKRAGLIGSRRGRNGGYEMIKEPRRVSLAEVLRLIDGPMAPLPCLSRKAYQRC EDCTDEQTCRVRAVFGGFYATYILMIESLTVADLQRDARPLESFGLS" gene complement(1632637..1633788) /locus_tag="RTM1035_07934" CDS complement(1632637..1633788) /locus_tag="RTM1035_07934" /note="COG3135 Uncharacterized protein involved in benzoate metabolism" /codon_start=1 /transl_table=11 /product="probable benzoate transporter protein" /protein_id="jcventer:1101493006649_RTM1035_07934" /db_xref="CDD:32949" /translation="MGVLAAFVGYSASFAIVLAGLTAMGATAAQATTGLFFATVGMGI CSIWLPVVTRIPAAVAWSTPGAAFLAATVTLPGGFGEAVGAMIFAAGLIVLTGFIPTL GRVVAAIPKPIANGLLAGVLLKLCFAPAIALGSIPLLVLPVLVAWLVGLTWNRLAAMP FAVLAFLAVLYFSVETSTDALQADTTWLPAFTPTIPIFTVQSFFSIALPLYLVTMAGQ NIPGFAVLELNGYRVERQPLIRKTGIVSLAFAPFGSIPVNMSAITAAMMAGEDAGRDP AKRYWAAITSGVVYVGLAFAAALVTSLASLAPLALITAVAGLALVPALVGSMSAAFSD RTQLEAPALTFLIAASGMTLFGISGAFWGVVVGALIWLAKAFAHRSIDP" gene complement(1633979..1635049) /locus_tag="RTM1035_07939" CDS complement(1633979..1635049) /locus_tag="RTM1035_07939" /note="COG1162 Predicted GTPases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07939" /db_xref="CDD:31356" /translation="MQQRHSAAIHADVSISSDQPSISLAALGWFTFFSEQVEDGEAEL APMRIATVHRDRVTAISERGPVRLELSAQSLTTDFAVGDWVLVNPETRLLMRRLDRRM LLQRKTEGGRPTQLIAANVDTLLIVTSCNDDFNLARLERYLALANEAGATPVIVLTKI DQTADAAPYLQQAKTLQQGLEVVLLNATGPEAALTLAPWCGPGQTVALVGSSGVGKST LLNTLSNKSSEDAQPTGPIREADAKGRHTTTSRSLHAIAGGGWVIDTPGMRTLHVRDA AAGLNTLFAEIVELAARCRFRDCTHDHEPGCAVQSAAADGTLDPARLARWRKLTQENL TNTPVQSGPRGNKITKPQGKRR" gene 1635196..1635528 /locus_tag="RTM1035_07944" CDS 1635196..1635528 /locus_tag="RTM1035_07944" /note="COG1393 Arsenate reductase and related proteins, glutaredoxin family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_07944" /db_xref="CDD:48584" /translation="MMIYGLQTCALCQKVRKALEAEGLDVSFRDIRAEPLSEAELAAL IVEFGDRLVDRKSNDYRALSDWLKNSEAEAQIAAQPKVMARPVIQDGDTFYLGWDETV QNAVLEGR" gene complement(1635758..1636402) /locus_tag="RTM1035_07949" CDS complement(1635758..1636402) /locus_tag="RTM1035_07949" /note="COG2755 Lysophospholipase L1 and related esterases" /codon_start=1 /transl_table=11 /product="lipolytic enzyme, G-D-S-L" /protein_id="jcventer:1101493006649_RTM1035_07949" /db_xref="CDD:29283" /translation="MKYVIVVALSLLAACGRGIPETARIVVAGDSVMAWNQSAGASVA DGLQARLGEPVGDVSLSLAQVAGGWSAWNIPTQLEGLRAEWVVLNGGANDLSTGCTCS SCGAVLDRLISDDGKRGAIPDLVANLRARGSKVIWADYYTAPRYAGTACEAPYQVLEQ RLGRMAHADAGVTLVDLDDVFLPDDLSLFAADRLHPSQKGSARIAGQIAPLLAR" gene 1637307..1639112 /locus_tag="RTM1035_07954" CDS 1637307..1639112 /locus_tag="RTM1035_07954" /EC_number="2.3.1.86" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="acyl-CoA synthase" /protein_id="jcventer:1101493006649_RTM1035_07954" /db_xref="CDD:30666" /translation="MQATGSSHSLALRRGDFTTLIEALDYAAKGDTGVNFYNARGELY ATSTYADLQVEVVDLARRLLGLGLEPGARVGLVAETSPHFVRFFWACQYAGLVPVPLP ATMHIGGHAGYVAQLRGLIENCGAAVAMAPVEWMSFLEEATTGLTLSFVGTPEDFDRL TPSTATLPTVAPDSIAYLQYTSGSTRFPRGVVIDHTTVLANINDMATHGLKMTEQDRF GSWLPFYHDMGLVAFIMMPMATQRSVDFLGTQDFAMRPRKWLEMMSGNRTTITSGPPF GYDLAAMRVRPSDAEQWDLSALRVACVGAEMINPEPLKRFAEALAPSGFKSTAFLPCY GMAECSLGISFAGLDEELQIDYVDAEQMQEDSIATPLDPEEAQKSKRRVARYVDCGAL LPTFEIAIRDEHGNDLPERQAGVIHLRGPSVMSHYFQEEAITRECLSEDGWLDTGDIG YLANGRLFVTGRRKDMIIIHGRNIWPEDLEYLAKTQPGVNYTDAAAFSVPSDVDQQET AVLVVQCRERDEIKRARLVKTIASLVRSEFGIDVVVELVPTRTLPRTSSGKLARARAR LDYLGRRQAAKMQHQPEPANSLPMDEAMPQVRYIA" gene 1639109..1640068 /locus_tag="RTM1035_07959" CDS 1639109..1640068 /locus_tag="RTM1035_07959" /note="COG0702 Predicted nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="NAD-dependent epimerase/dehydratase" /protein_id="jcventer:1101493006649_RTM1035_07959" /db_xref="CDD:30800" /translation="MTGPVAVTGASGFVGRALIGQLLDAERPVRALVHRQGLGITHPL LETVTGGLSDKAALAKLMAGAQAVVHVAGQVRGRDLADFLGVNADGVTHVAEAAQASG VRRVILISSLAARAPHLSPYAASKRAGEERLAKVAIGAGFTSAILRPPAIYGPEDREL VPLFQTMARGIVPLPGVAGARASLLHVDDLARAIVKLLDSAAEATYELDDGHGAGYSW DEIATIVEEVAGRGRGWRVKLPGGLLRAVATGNLLASRLLGYSPMLTPGKVNELRHPD WVCDNTEISRDTGWLPLISLENGLSSILRGTPLKSDRGITNVT" gene 1640058..1640324 /locus_tag="RTM1035_07964" CDS 1640058..1640324 /locus_tag="RTM1035_07964" /note="COG0236 Acyl carrier protein" /codon_start=1 /transl_table=11 /product="Phosphopantetheine attachment site" /protein_id="jcventer:1101493006649_RTM1035_07964" /db_xref="CDD:30585" /translation="MSHDTQDLEQEILDVLFERLSKFPVKSGALSADTSLVADMNLDS VNMMELLMEVEDTFDVSFPLNMMANVDTVQNLADQIKLLVEKKS" gene 1640321..1641535 /locus_tag="RTM1035_07969" CDS 1640321..1641535 /locus_tag="RTM1035_07969" /note="COG0156 7-keto-8-aminopelargonate synthetase and related enzymes" /codon_start=1 /transl_table=11 /product="8-amino-7-oxononanoate synthase" /protein_id="jcventer:1101493006649_RTM1035_07969" /db_xref="CDD:30505" /translation="MSISDRFAELAHLRDALDAEEADPTRIVMERILSSTEAMIGNRP TILVGTNNYLGLTFDPAVLEAASAALHEQGSGTTGSRMANGSFACHAALERAFADFYG VPSAMVFSTGYQTNLGLLMGILRPGDKVVLDSHSHACIYDGCRISGADFLAFRHNDPE DLRKRLRRLGDEAKGALVIAEGLYSMLGDTAPLAELCAIAKEYGAWFMVDEAHSFGVY GERGLGLCEEAGILDQVDFITGTFSKSLASLGGFCVSRHPELQLLRYGSRPYIFTASP SPASIGAAAAALEAVRTRLELKANLWANATRLHDGLSAAGYELAAPVSPVIAVRVPSR EEGARIWNALMEHGVYVNLVLPPAAPEGAALLRCSLSAAHSFDQIDTIIAAFKTVAPE AATRTAQSTAAQ" gene 1641590..1642549 /locus_tag="RTM1035_07974" CDS 1641590..1642549 /locus_tag="RTM1035_07974" /note="COG1409 Predicted phosphohydrolases" /codon_start=1 /transl_table=11 /product="metallophosphoesterase" /protein_id="jcventer:1101493006649_RTM1035_07974" /db_xref="CDD:31599" /translation="MTGQGRSDPETGAGITLAHLSDPHLPLTGPVPWHSVLNKRALSL LSWHRKRRHHHRPEILAMLIADMRAHAPDQIAVTGDLTNLGLESEYRAARRWLENLGR PERVMVIPGNHEALIRGAWDAGAAQWLPYWQGDAAPVTVDVSDAFPYMRRRGMLALIG VSSAVATPPAFASGAVGPAQLARLAPMLRKARGAGLCRVLMIHHPPLDGTVSARKALR DAAAFRAVLQAEGVELVLHGHSHRHHHQTLETRDGPTPVIGVPSASSLYPEAAAYHLY QIRPTAAGWEIDVTARHATREQEMATGRCTRLTLARAHAACAP" gene 1642658..1644373 /locus_tag="RTM1035_07979" CDS 1642658..1644373 /locus_tag="RTM1035_07979" /note="COG1132 ABC-type multidrug transport system, ATPase and permease components" /codon_start=1 /transl_table=11 /product="ABC transporter related protein" /protein_id="jcventer:1101493006649_RTM1035_07979" /db_xref="CDD:31327" /translation="MRLMLNLFRAYPMASFLMVLALFFSGLAEGLGLSAMLPMLKIVL NTDPSGTMAEPPGQMEQMVLDVLAWAGIPVTLGALLTLIVVAATFKAVLLLIAQRQVG YTAARVATDLRLQILRNMMRSRWHFFLHQPAGKLANTLATEAQRAADAYMNGATALTF FIQALVYTSVAVVISWKATLLSLIGGIVIIGLSHFLVRITRKAGQKQTDLMVSLMSHL TDTLQSVKPLKAMAREHLADELLKHETNRLNKALRRQVLASAALNSGQDLMFIMVIAF GVYLALGILSMDFAIVLMLAVTLGRGYNFLGKVQKQYQKMMQSESAYWSLIDTNRRAE EEQEHLGGHATPALTKGIALRDIAFSYDGNTVLSGFDLDIPAHQMTTLVGPSGSGKTT IIDLVIGLLRPDTGQITIDDRPFEEIDLKAWRRMVGYVPQETVLLHDSVLHNVSLGDP QISEARVEAALKQAGAWDFVQDLPEGIHTLVGERGGRLSGGQRQRVAIARALINAPQL LILDEATSALDPESEAAIIETLRGLREQLTILAITHNSSLSDAADVVHRLEPAAASKG TTDEA" gene complement(1644370..1645263) /locus_tag="RTM1035_07984" CDS complement(1644370..1645263) /locus_tag="RTM1035_07984" /note="COG3660 Predicted nucleoside-diphosphate-sugar epimerase" /codon_start=1 /transl_table=11 /product="Predicted nucleoside-diphosphate-sugar epimerase" /protein_id="jcventer:1101493006649_RTM1035_07984" /db_xref="CDD:46149" /translation="MGMRNEPVARWIKDQSGGRTRLVFLGRLWADPAHFDLVITTPQY RVPDRPNVLRNALPLHPLTPERLEVARAHWAPKLAHLPRPYLTLNIGGPSGPYAFGAR ASARLLRDTMALAQARGASLLISSSARTPPEAIAAFAAQTDVPMQLYRFRPNDPENPY LGFLAIADEIIVTADSISMLSEAYATGKPVHMFDLGAGTLSMRHDALVAIGERAQARA LARHDPDRPDLSLGALAYRALMRWGWKHLSRDISQMHLRLARSGRMTWLGEPVRPASD TPAPSDMARALDRINALMGRS" gene complement(1645300..1645497) /locus_tag="RTM1035_07989" CDS complement(1645300..1645497) /locus_tag="RTM1035_07989" /EC_number="2.3.1.-" /codon_start=1 /transl_table=11 /product="lipid A biosynthesis lauroyl acyltransferase" /protein_id="jcventer:1101493006649_RTM1035_07989" /translation="MPEANVTPRVWVLDAYRSGEKTQVRALAQGLGWPYEIKTLRYRK KEIRTTLFRGRDLRGGRPARL" gene complement(1645490..1646443) /locus_tag="RTM1035_07994" CDS complement(1645490..1646443) /locus_tag="RTM1035_07994" /note="COG1560 Lauroyl/myristoyl acyltransferase" /codon_start=1 /transl_table=11 /product="lipid A biosynthesis lauroyl acyltransferase" /protein_id="jcventer:1101493006649_RTM1035_07994" /db_xref="CDD:31748" /translation="MAKFFLTPKGLIARFPWVQTPAWMVEAGVFYLMLGFARLLPFSV ASGLFARALGWLGYRNAQKRRTVGRNLSHVLPEASDTTRDAVMRDIFRSTGRAAAELF LLERLWQNRTQHLEFFVHPEAEEIIARKEAIVFATAHVSAWQLCNLIGRERELTISVI YTPEPNPWLHGFFLSLRRAFGGPLVPSAGGARELLHELAAGRSVGAAFDTRVDQGEMV PFFGTPTPTSTLPALLAQRGYPLVPIRAVRLPNARFRIEVLAPLAPADPDLPRKERIF DMTHRLNLIFEDWIRDYPGEWICMKRRWFKTRDSAPKAPDA" gene complement(1646489..1647136) /locus_tag="RTM1035_07999" CDS complement(1646489..1647136) /locus_tag="RTM1035_07999" /note="COG3000 Sterol desaturase" /codon_start=1 /transl_table=11 /product="Fatty acid hydroxylase" /protein_id="jcventer:1101493006649_RTM1035_07999" /db_xref="CDD:44031" /translation="MTSHQPSRTHRVDESVRLFENPLLEKLSHVHPIVPLLVWGPVAI WLIARAVMVHGIGWGGMAMIGVAGLVTWTLAEYLLHRYLFHFEPKTDMGRRFIYLFHG VHHDTPQDKTRLLMPPAGALPIIAVLYLMFYTVLPYPWAEPFTGFFIIGYLVYDYIHY ATHHFPMRHPALKFLKHYHMRHHFSDDAGRYGVSSPLWDLIFRTYPTKPERSDRT" gene complement(1647163..1648131) /locus_tag="RTM1035_08004" CDS complement(1647163..1648131) /locus_tag="RTM1035_08004" /note="COG1560 Lauroyl/myristoyl acyltransferase" /codon_start=1 /transl_table=11 /product="Lauroyl/myristoyl acyltransferase" /protein_id="jcventer:1101493006649_RTM1035_08004" /db_xref="CDD:31748" /translation="MAKFILANAHRDKLFNNRVARNVLWFIDYVVLASVMSLFRLMPV TWASALGARLGQMFGRIFGRRNQHVRANLTMSLPDRSPAEIDNLANQVWANAGAVLGE YPNLAKLCNPKRDTLEIEVLEQIPAYSDPTKPAVFVSAHLANWEMMATAIARLGVRPC AMYAPLTNPWLDRTMLQYRGMLGCELVSRNEGLRAFVDALKSGRSPIMLTDRRVEGGK PIPFFDEDKESSLLPARLALRFGVPLVPVQAERLPGARFRVRFYPPLVPSDPTMDRDN QTVDLARQINEKFEQWITAKPGDWLCTSKIWPSSILRAKTDIYEDA" gene 1648295..1649446 /locus_tag="RTM1035_08009" CDS 1648295..1649446 /locus_tag="RTM1035_08009" /codon_start=1 /transl_table=11 /product="Hypothetical protein yghO" /protein_id="jcventer:1101493006649_RTM1035_08009" /translation="MSPTQPEGAHIRLVEAVNGAAVRDFLHLPERIYADDPAWVAPLI FEQKQRVFENAPLFAHCEVARWVAYRDGVPVGRITAQLDTLQPEAEEGGKIGYFGMLE AVDDSAVFDALFGAAEAWLRDRGAAHLRGPYNLSINEDLGLLVENFDDPPFVMMGHAR PYYQRQIEDRGFATIKDLLTYKVRPDFVAPEVMTKLAQRASRTVTIRPLNSKGKAADY EAMRDIFNDAWSDNWGFVPFTREEFAETAKVLSFLLSDDYIQFAEIDGRLVAFITAFP NLNELIGDLRGRLLPFGWAKLLWRLKVRGPKSARVALMGVRKEYQNSRLGPTLAFLVI DAVRKAMQQRNVTSVEMGWILEDNHGMRHIIEAIGSTIYKRYRVYQKPL" gene 1649488..1650285 /locus_tag="RTM1035_08014" CDS 1649488..1650285 /locus_tag="RTM1035_08014" /note="COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08014" /db_xref="CDD:31089" /translation="MTDFASVILAGERDDRDALRDETGVACKALLDIGGTPMIRRVID ALRSAQSIGTIHLSGPTEACVQSDAGLAGLVARKEVAWVASGPSPSTSAHQMLSRFPA TQPVMITTADHPLLTGEIVDHFCRGAAKSGCDVVIGLAPYDLVRATYPELKKTVLRFR DGGYCGCNLFGFLTEDGRRVADFWRQVEKDRKKPLVVIRLLGLWSLLSYRMGWLTLDR ALARLSRRVGVRIGVVILPYAHASVDVDSLSDYVLVQQYSAEGRGGA" gene complement(1650514..1651452) /locus_tag="RTM1035_08019" CDS complement(1650514..1651452) /locus_tag="RTM1035_08019" /codon_start=1 /transl_table=11 /product="putative sulfotransferase protein" /protein_id="jcventer:1101493006649_RTM1035_08019" /db_xref="CDD:40766" /translation="MPNMTNLSYREIRDVAARHLILSALFFLPKGQKIALERRLRGRQ ENAKLREADWALVSWGKSGRTWFRVMLSRFYQLHYGLETEYMLEFDNFHALNPAAPKV LFSHNNYIRDHFNHGDDLAQYRGKKLVLLVRDPRDVAVSQYFQWSYRMRPRKKALNAY PAHGSKVAIYDFVRNPDCGIPRIVAAFNAWARSLPSLGEDVLVVRYEDLRRDPAEVLR QVVSFTGIDPDPAHIEAAKDYAAYENMKKREASNEGMRGSGQRVKPGDESNPDSFKVR RGKVGGYRDYFTPEEVAVVDGLVEGKLDPVFGYNEV" gene 1651626..1652678 /locus_tag="RTM1035_08024" CDS 1651626..1652678 /locus_tag="RTM1035_08024" /note="COG3660 Predicted nucleoside-diphosphate-sugar epimerase" /codon_start=1 /transl_table=11 /product="Predicted nucleoside-diphosphate-sugar epimerase" /protein_id="jcventer:1101493006649_RTM1035_08024" /db_xref="CDD:33458" /translation="MGRKAGDNTQVLALAHALGWPMEEKSILARGWELVPHLLLRVTL LGIDQHASSPLTAPWPDLVISAGRRNEPVARWIKRQSGGRTKLVHLGRPWAPVESYDL IVSTPQYFLTPGPTVLINPLPLHQFTRAGVDQAATAATTALAHLPRPYTTILIGGDSG PFVFTPDKGRLLAQGVNRLIRQTGGTALVSGSPRTPPAVAEAISAALDVPAQCYWWHN RDKAAPNPYSAYLGLADRFVVTGESMSMLAEAASLGRPLYIFDPGDAPGSWWSHAHNL RPKPLSHALAMRFAPRRMRRDVSRIQQALVEAGQARWLEDAPELIATGETWAKKMRPD PSVGAHVAAERIRALF" gene complement(1652691..1653641) /locus_tag="RTM1035_08029" CDS complement(1652691..1653641) /locus_tag="RTM1035_08029" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08029" /db_xref="CDD:41547" /translation="MKHAVFIQTNHKQIVGAIVAEHALRRYSTNNDKFEVHIVNSRDY PFFLAREGQEYMRDGVKRVWLNEDLQSFTPTRFMPPELMGYEGRAVVIDPDVFACADI WELLNRDMKGKAVMARMRSGTKGLIDKAYASSVMLLDCAKLKHWKVEEQFNAMFDGDH DYSRWIGLRNEDPTTLEFIENEWNDFDKFTTDTKMLHTTRRKTQPWKTGLPVDWRPAE RFRLFPPAAWVLRLRRKIFGEYGLMGNYKEHPDKNQENFFWGLVKECVEQGKLTEEFL RQEMKDNHVRHDALDVIARVPSLPPAPAHPLSTGNLAKAA" gene complement(1653830..1654777) /locus_tag="RTM1035_08034" CDS complement(1653830..1654777) /locus_tag="RTM1035_08034" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08034" /translation="MTGAQYPTPDGPTLDSSAELRALMTALTARFGDGLQAVILYGSC LRSANLLDGLVDFYVLVESTPKAEPRLWLRLGGRLLPPNVYYLEAPLGSDTVRCKYAV LSLRQFERGTGPGWFQSYLWGRFAQPVKPIWCQSQDVETRLHAAFLRAGETLLRRALP ALPPEGSVEALWQGALALSYATELRAEKQGRAAELAGHGRSFLTAMTQALLPRMADVL QLEQGAEGAPRYRSNVSPRARRLAPILWALRRVQGKALSVARLIKGLFTFEGGLDYLA WKLSRHSGQVVEIPDKVRRRPLIHIWGFMRQLYRRGVFR" gene complement(1654852..1655817) /locus_tag="RTM1035_08039" CDS complement(1654852..1655817) /locus_tag="RTM1035_08039" /note="COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase" /codon_start=1 /transl_table=11 /product="DAG-kinase catalytic domain (presumed)" /protein_id="jcventer:1101493006649_RTM1035_08039" /db_xref="CDD:31785" /translation="MISNPTSGNNRKWQAHIEARLAAYPQVAHHVTRSPQEAEALVPQ LAALRPDVVVINGGDGTIAAALGMILSHWPRESLPLIVLLPGGTANMTAGDIGTASSH RRALKRFFRWLDRGAPLSGDIRARHIMRVTGAADGHIRHGMFLGTGAIMQATRFAHKT VHSRGLGGEISLGIILIRSVWGLIRQDPRFYQPTHVALRVEDSTPTPVTRDAAPMLIL VASTLGRLFLGIRPFWAKQKAPIGLTAIRGGAARFARAFPSVLRGHPNRHVTAENGYE SFRGARIELRFDGELNLDGELFATAGGDVPLVIGAEGPIRFLRPK" gene complement(1655840..1656991) /locus_tag="RTM1035_08044" CDS complement(1655840..1656991) /locus_tag="RTM1035_08044" /note="COG3660 Predicted nucleoside-diphosphate-sugar epimerase" /codon_start=1 /transl_table=11 /product="Predicted nucleoside-diphosphate-sugar epimerase" /protein_id="jcventer:1101493006649_RTM1035_08044" /db_xref="CDD:33458" /translation="MSQPDAMPRIWRVLGDKRGDNAQVEIVAEALARERGWVSELRHL EMLPKFVVGKPRVGPTLYHIDQSLSDPIEPPWPDVILTRGRRPANVALWIKKQSGGRT RIVLVGKPAGWFSHQMAQFDLIVTSAETLPAPFENVMQIDLPLMKISPERLEAGRKAW QERLGALPRPLVVFLIGGPTSPFIYNTEMEARLRARMAQVLSEGGTPYIVGSRRTPAG FLDRVTAGLPEGVQRFDWTQPDSENPYTGLLALADRFVVTGDSISMLVEVARLGKALE IVPLPFGPLGKLDDARRRAAAWMFQARRNAGPAERLRLALARGLYHLRMLQQTRHFPR FHQILIDRGLATWMGEGQDARMGDRPALSATDADVARILARIDPLLSGR" gene complement(1656988..1657971) /locus_tag="RTM1035_08049" CDS complement(1656988..1657971) /locus_tag="RTM1035_08049" /codon_start=1 /transl_table=11 /product="putative sulfotransferase protein" /protein_id="jcventer:1101493006649_RTM1035_08049" /db_xref="CDD:40766" /translation="MRDTLRLLRASFPEASKVVWRKASRRLLKLKMDMTGADQDERIR AERHMRGREQFASLQRADAVVVSFGKSGRTWLRVMISRLYQQVYDLPEDILIGFDNFH NMDRRAPRLFFTHDNYIGDFTGNTDNKADFYDKKVLLMMRDPRDVAVSQFFQWRFRMP SEKKALNEYPAHDDETPIYDFVLHEGGGLPKIIDFMNLWAREMDKMRALCLIRYEDMR ANPHSVLTEVAQFLDIPTDAAAIQEAVDYASFENMKKKEADSSFRLSGARVAPGDKSN PDSYKTRRAKVGGYRDYFDDAQVAVIDALVEARLDPVYRYAATANADKPAE" gene complement(1658074..1660023) /locus_tag="RTM1035_08054" CDS complement(1658074..1660023) /locus_tag="RTM1035_08054" /note="COG1835 Predicted acyltransferases" /codon_start=1 /transl_table=11 /product="putative putative membrane-located cell surface saccharide saccharide acetylase" /protein_id="jcventer:1101493006649_RTM1035_08054" /db_xref="CDD:32020" /translation="MKYRPEIDGLRAIAILPVVFYHAGVTWFPGGFVGVDVFFVISGY LITSIILSERAAGNFTLTGFYGRRIRRIFPALFVMMAVSYPIAWALLDPSAMAEFSGS IAASTVFFANVYFLEVSGYFATAAEFKPLLHNWSLSVEEQFYLIFPMAVLLTWRAGAK WQVRIFMAVALLSLALAQWQIARGNEARAFFLLYARLWELLVGVLIAYWLTTPQGAAL RDGGRFRHGALLGLALILWAVFTYDTETAFPGLAALLPCVGAALVIAFAKGQSLIGQV LGWRPVVFVGLVSYSLYLWHVPALVFTRIGTGREDLWLMLAACALAFALACLSWRYVE RPFRRMHALPPLRLFGTAAACMVVLGGLGLLGQETDGFRAHYLEHRLDPVTRANYERY SPTATRSRVADDGCRFRDEELTEEFGARLQDCAARHGPGIFILGDSHAENVYNALRST ERFPFLVGLTRGGCRPYQYKAKCSYEAAIPFLTTYRDSVAQVVFHVSGSHYILDHRNE GDSDAAFEPGTEGRIAEENVTLTSAYLAKLPEGLDVVWLGPFAEARVDLSNPGNYSTE RLQFNPVALAHFDRLEARLKSEAEGQTAYRYLSLLDALDFGPDALLQGDCLTFWDVDH FSPCGERLFGPTIADLVLSKAPLTQ" gene complement(1660071..1660748) /locus_tag="RTM1035_08059" CDS complement(1660071..1660748) /locus_tag="RTM1035_08059" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08059" /translation="MTSYGRGNPSPEYLDMVAMYERLHEEGEAAAGKSGTQTFPGKML IRHAPGIKEMIDRTGAADILDYGAGKAVGYDLRDVALTKELTVPSIQDYWGVTDIRCY DPGHEPFKELPDRQYDGVICTDVLEHITTPDVPWIVEEMFGYARKFLYANVACYPAVK VLPNGQNVHCTVKSPEWWAGLFHGIAMRHTDVSYRLITSTATGRKKKFGFAKNRKKEY QTVERMA" gene 1661353..1664208 /locus_tag="RTM1035_08064" CDS 1661353..1664208 /locus_tag="RTM1035_08064" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08064" /db_xref="CDD:33336" /translation="MFGTNLTITTNISLRDKVIDRFTEANITNLRFPGGSITESHFDI SDIAGGSHERTVGSFENSGALDLIAFSDFLDFTATLGTSTTFVIPTSVGFTQTAGEAL LAGTYGGRLVSASYLQDVADFVTMAVQSAAAAGVRIDAFEIGNEFWGSGRMTAHEYGS LAAAVAQTVETTLFDLDLVRAKQPDIVVQTLSAAGVYSPNGGGVLYVDPLTRFVYQPT QIGDAGVPPLTQLTQVAVPSQGNAKTQNTVILSAFAQESMLVQAANGGIFSIDVSDAA NAIDAISEHYYLDGGLGAVDTQEQFGFTQLEFWRVNLGNRSAALPELDYYITEWNVSR TGDVNEANNRGLQHAILDVAMFYEMVTRDVTTAHYWPSLFNNSRSVTLVCTCRGHLTI AGESYSLLHKAVGMTPVLDFLEADNITIHGFENGPESFFILADLSGTATDKTLDFSAV LDPSATLYRVSYSELWDGGAGGQDEEAAQVVLETEFVDLISAEDLESFLVTMQAWSLV YLHLEAVTDGVAAKPGQASRTVTVTVGDDPLSLGDVPGEEDHHTNVKGPRFILNGGAG DDTLNGGAGDDRLIGGLGDDLMLGGIGDDVAVFEGVTFDTVAFSLTPGGLRVVSALGI DDLTDVEWMEFADQTVSVAEVRVAMLGFPGDFVMAGDAGEMLFGTDSDDTLIGGDGDD IISGGLGNDSLDGGAGNDRISASDGNDFILGGPGNDDIGGGPGNDTINGGEGDDIIGG GFGADSILGGDGNDVVAGGADNDTLSGGAGNDSISGSFGSDLIFGNDGADDIGGGTGQ DTINAGAGDDSVGGGEGNDSILGEDGNDFLAGGGRDDTINGGTGDDTINGGSGSDRMS GGAGTDQFVFSSFFDGEVDVITDFEDGVDSFFIRRFDPDTGFENITNGGNGLVGFLAA LSITDTAAGAEMNVNGNTILVEGITAAQLTLEDFQFL" gene 1664358..1666088 /locus_tag="RTM1035_08069" CDS 1664358..1666088 /locus_tag="RTM1035_08069" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="rhizobiocin/RTX toxin" /protein_id="jcventer:1101493006649_RTM1035_08069" /translation="MNLFTVNGFAARIDGIFVLPNGTLSVLAGNFRTVSLELSVPADQ FSYRLAEPATAGEIPDVIINNLSEFQIARLDGIDLRLDDNAIGLASLGVLTATSGSAV MLSFFNVRTNDNYFFQLGTSSVPQPNDLESFRQFVSSIRGGNPVTQGPFAPNQPIAIS AFANTTVSELSDDELVIGTNGQDLLTGDEGQDTLLGLDGNDVLNGGEGDDLLDGGEGF DTATYNIGSPSEFQITLTETGLRLASPSEGVDDLINIEQVEFAGQSVLVSDLIEEIVG RPGVFLVAAEGGDTLIGTDDNDTLIGEQGHDGLAGGPGNDTLEGNGGNDSISGSDGND LISGGADNDSIGGGQGDDTIDGGSGDDIIGGGFGADSITGGAGNDVVAGGADSDTLQG GEGNDSMSGSFGNDSIDGGEGADDIGGGTGRDTINAGAGDDRVGGGEGNDSIFGGDGN DFLAGGGRNDVIDGGAGNDTINAGAGNDVITGGADADLFVFSAFFDGESDAITDFEDG SDIFLIRRFDPDTGVENINNGGNGLAGFLAAMKIVDWAGGAQMTVNGNTILVEGVTAA QLTVDDFQFL" gene complement(1666092..1667021) /locus_tag="RTM1035_08074" CDS complement(1666092..1667021) /locus_tag="RTM1035_08074" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006649_RTM1035_08074" /db_xref="CDD:30928" /translation="MNRLHEIEVFIAVAEAGSFAGAARRLHLSPPAVTRAIAALEDRL GARVFQRTTRSLTITDVGERFLGAARRVLGDLDTAEREAMGETTAPQGHLTVTASVTF GRSALGPMVGSFLVAHPRVSVSVLLLDRVVNLVEEGVDLAIRIGELPESRLIAKRLGT VHRILVASPEYLAQHGTPAAPADLRHHAVIAFTGLMPNREWRHRSGQRSASVALAPRL EINDAVAAIDAAILGQGITPTLSYMVAGHIRAGRLVPVLQAHTLPPQPVNLVYPEARL MAPKLRAFLDFAGPRLKSALADLAEGVAVPKAL" gene 1667148..1667693 /locus_tag="RTM1035_08079" CDS 1667148..1667693 /locus_tag="RTM1035_08079" /note="COG2128 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="alkylhydroperoxidase AhpD family core domain protein" /protein_id="jcventer:1101493006649_RTM1035_08079" /db_xref="CDD:32311" /translation="MARISVIDPKTATGEAKALLDAVQSALGMVPNFIRVLANSPAAL QAFLGLHGIAGAGALDPLTRERIALAVAEQNSCQYCVSAHTAIGRKVGLDSDEILANR AGRSADAKAEAALTFARTLVEHAGEVSQAEFAALRTAGHSDAEIVEIITHVAMNIFTN ILGKATQVEIDFPKVTLNTAA" gene 1667813..1668220 /locus_tag="RTM1035_08084" CDS 1667813..1668220 /locus_tag="RTM1035_08084" /note="COG3558 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08084" /db_xref="CDD:46964" /translation="MAEDGWNGRDPARVALAYTPDSRWRNRAEFPVGREEITAFLIRK WARELEYRLIKELWAFAENRIAVRFAYEWRDDAGNWYRSHGNENWEFDEKGLMRLRFA SINDQPIKESERKFHWPQGPRPADHPGLSDLGL" gene 1668236..1668835 /locus_tag="RTM1035_08089" CDS 1668236..1668835 /locus_tag="RTM1035_08089" /note="COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase" /codon_start=1 /transl_table=11 /product="pyridoxamine 5'-phosphate oxidase / oxidoreductase, NAD-dependent" /protein_id="jcventer:1101493006649_RTM1035_08089" /db_xref="CDD:33377" /translation="MPHHFANIAFTPTVTRLQEEQGSRASYARMQAADGPVNLYLSEV EAEFIAARDSVYMATVTETGWPYIQHRGGPMGFLRVLDDRTLGFADFRGNRQYISLGN LSTDDRVSLFLMDYPNRRRLKILGRARAVGLEDTATLARLDLPDYRARIERGFLITVE GFDWNCPQHITPRFSMEQIDGVTAPLLSRIATLEAALGL" gene complement(1668848..1669804) /locus_tag="RTM1035_08094" CDS complement(1668848..1669804) /locus_tag="RTM1035_08094" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08094" /translation="MSEPVLPLSDLDALARLDARLRALVTAHPDLTGLDISEVLRIVP GKRAVLAGRLDGRAVVARLVEERGAEALAKEWAELQRIWPHMQSGRYRVAEPICYLPD ARILVMERAPGEALLEHLWQADVGSRAQHLRPAAEWLRDYVEISEGWKPGNAKGWLAR AARAAATQPFGRLRRIESGILAHLTEMATALDGAEWRVAISHGDFHPNNLILGEDRLT GIDTGGSGRLPVCKDIARFLVHMGRRGMIPSGRRYLGVDAEGLEVFAEVFALTEIERN LWLPFFIGIEALIRVETRALKHSRIKRAEELYGLLLDDLAAL" gene 1669907..1670149 /locus_tag="RTM1035_08099" CDS 1669907..1670149 /locus_tag="RTM1035_08099" /note="COG1722 Exonuclease VII small subunit" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII, small subunit" /protein_id="jcventer:1101493006649_RTM1035_08099" /db_xref="CDD:42577" /translation="MTDTPPSEMTFEQAMKELEQVVGRLERGDVALDESITLYERGAK LKKRCEEKLKEAEEKVAAITLDADGQPTGTTPVTGL" gene 1670155..1671018 /locus_tag="RTM1035_08104" CDS 1670155..1671018 /locus_tag="RTM1035_08104" /note="COG0142 Geranylgeranyl pyrophosphate synthase" /codon_start=1 /transl_table=11 /product="farnesyl diphosphate synthase" /protein_id="jcventer:1101493006649_RTM1035_08104" /db_xref="CDD:30491" /translation="MQARLAAEAETIQTHLSRVLAPFGTGPVAEGMRYATQGGKRIRG FLVMESARLHDVPETAAIWPATAIEALHAYSLVHDDLPAMDNDDLRRGQPTVHIKWDE ATAILVGDALQSLAFELVAHPDCGPAEVRAGLTLSLARAAGGQGMVLGQALDIAAETA TSPLSLDEITTLQAGKTGALILWSATAGACMAHADMTPLSTYARALGLAFQIQDDVID VTGDAAAAGKAVGKDAAAGKATFVSLLGLDGARARAASLVDAACDALSCYGERGERLR DLARFVISRQS" gene 1671048..1672979 /locus_tag="RTM1035_08109" CDS 1671048..1672979 /locus_tag="RTM1035_08109" /EC_number="2.2.1.7" /note="COG1154 Deoxyxylulose-5-phosphate synthase" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose-5-phosphate synthase" /protein_id="jcventer:1101493006649_RTM1035_08109" /db_xref="CDD:31348" /translation="MMSDRPQTPLLDQVASPADLKRFSDSQLVQLAHELRSETISAVS ETGGHLGAGLGVVELTVALHHVFDAPRDKIIWDVSHQCYPHKILTGRRDRIRTLRQKD GLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGNCPSGLGDAIAVIGDGAMS AGMAFEAMNNAGHLKKRLIVILNDNEMSIAPPVGALSSYLSRLYAEAPFQDFKAAAKG AISLLPPPFQEGARRAKDMLKGLAVGGTLFEELGFSYVGPIDGHDLHQLLPVLRTVKA RATGPILIHVLTKKGKGYGPAERARDGGHATAKFDVLTGEQRKSPSNAPSYTGVFAKA LLAHAAQDDKICAVTAAMPDGTGLNLFAERYPSRLFDVGIAEQHAVTFSAGLAAGGLK PFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDTAFLANLP GFVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGEGMGVTMPERGEPLEIGKGRIIQ TGARVAILSFGTRLSEVLKASEALRARGITPTIADARFAKPLDEALILDLVQNHEAMI TVEEGAIGGFASHVSHFLAEAQVFDRGFKFRSMVLPDTFIDQASAEDMYAVARLNAAD IEARVLDVLGIAQLAGKRA" gene 1673012..1674100 /locus_tag="RTM1035_08114" CDS 1673012..1674100 /locus_tag="RTM1035_08114" /note="COG2133 Glucose/sorbosone dehydrogenases" /codon_start=1 /transl_table=11 /product="glucose sorbosone dehydrogenase" /protein_id="jcventer:1101493006649_RTM1035_08114" /db_xref="CDD:32316" /translation="MRLIPLILAACFAITPAHALDSSAGKLTVTKMVDQLNDPWAIGF LPDDSLLITEKGGRLLHVIKGQGRAITGLPDVATRGQGGLLDILVPRDFAQSRQLYFT YSKPQPGGAGTAIAHARLAPGADRLTDWTVIFELEPGSSGGRHFGSRLVEGRDGMLYA TIGDRGDDSSAQDLARQNGAVVRIARDGTIPSDNPFTQTAGAQPEIWSYGHRNPQGAA LDAKGNLWVVEHGARGGDEVNSIAKGANFGWPVISYGRHYSGLKIGEGTQKSGLEQPA HYWDPSIAPSGMMIYQGDMFPEWRGDIFVGSLKFDMISRLDGTPLTEVERLKSRETQR VRDIREAPDGSIWFLSVGQGAAYRLSPG" gene complement(1674163..1675167) /locus_tag="RTM1035_08119" CDS complement(1674163..1675167) /locus_tag="RTM1035_08119" /note="COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006649_RTM1035_08119" /db_xref="CDD:34583" /translation="MMTSEATKIAVKAPKEPKRFVFVLLDRFTLLSFASAIECLRIAN RMAEEELYSWVLTGDSEDVITCSAGVRFNLDFALSDLNREDVVLVCGGMDVQKAATKR MLNWLRREARKGLRMGGLCTASYVLARAGLLDGKRATIHWENHDSFLEEFEDVTLTKS VFVIDGNRMSTAGGTSSIDLMLNIIADDHGEKLANAVADQQIYSSIRTDQDTQRLSVP TRIGVRHPKLSQVIQMMETNIEEPISPATLARDVGMSTRQLERLFRRYLSRSPKRYYM ELRLQKARNLLMQTDMTVINVALACGFASPSHFSKCYRAHYNTTPYRERGAHSSRLSV " gene 1675339..1676709 /locus_tag="RTM1035_08124" CDS 1675339..1676709 /locus_tag="RTM1035_08124" /note="COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase" /codon_start=1 /transl_table=11 /product="phospho-2-dehydro-3-deoxyheptonate aldolase" /protein_id="jcventer:1101493006649_RTM1035_08124" /db_xref="CDD:41520" /translation="MTEWQKTGWRAKPRVQMPDYLDAAALANVEARLRQYPPLVFAGE ARRLKRALGAAARGEAFLLQGGDCAEAFDQFSADAIRDTFKVMLQMAMVLTYGAKVPV VKVGRMAGQFAKPRSAPTEVIEGVELPSYRGDIINELAFTPEARIPNPDKMLQAYTQA AATLNLLRAFSTGGYADVHQVHAWTLGFTESEKAAKYREMANHISDALDFMKAAGVDS DNAHTLKTVDFYTSHESLLLEYEEALCRLDSTSGKWLAGSGHMLWIGDRTRQPDGAHV EFLRGVQNPIGLKCGPSMTSDDLKRLLATLNPSNEAGRLTLIARFGAGKVAENLPRLI RTVQEEGASVLWVCDPMHGNTIKSATGYKTRPFELVLREVQEFFGIHKAEGTIPGGVH FEMTGQDVTECTGGMRALSEENLSARYHTACDPRLNASQSLELAFLVAEELKSLRHDR RQAEAG" gene complement(1676770..1677420) /locus_tag="RTM1035_08129" CDS complement(1676770..1677420) /locus_tag="RTM1035_08129" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08129" /translation="MQDDRTISCFPGVTAVDRLHAADLQALHSYWAGLCEGAEVPRRS DINPRHIGGLLSNAFIVERIAPGVTRLRVAGLHLNALMGMEVRGMPLSSLITPAARET FALALVDLFERPARLDIDLHAKAGLGRPEMTGRLLLWPLRSDLGDVSRALGCLVTQGD IGRASRRFEMTSVRVLPLDATAAPAAKPNEPLTGGLRGEWPVRGAARGRAHLRVVK" gene 1677486..1677578 /locus_tag="RTM1035_08134" CDS 1677486..1677578 /locus_tag="RTM1035_08134" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08134" /translation="MNLAQRLRHRTLDQDCHKFLGIYLKIAEIG" gene 1677675..1678565 /locus_tag="RTM1035_08139" CDS 1677675..1678565 /locus_tag="RTM1035_08139" /note="COG1561 Uncharacterized stress-induced protein" /codon_start=1 /transl_table=11 /product="yicC family protein" /protein_id="jcventer:1101493006649_RTM1035_08139" /db_xref="CDD:31749" /translation="MIQSMTAFATAKGAIPGHDWTWDLRSVNGKGLDLRLRVPDWIEG LDPALRARLGQVLARGNVSLTLRLNSADASGQVAVNPDRLEDVLRAMALVEDRAMSSG LSLAPATAADILTLRGVLEAGTGESDSTALCAALLADFEPLLTDFLAMRAAEGAALAQ ILHAQLDEIARLTQAAQDLLAQRSADIARAHQTALSRLRDSATDLDPARLAQELALLA VKLDVTEELDRLRAHVRAARTLLESGAPVGRKIDFLSQEFNREANTLCSKAQHSGLTE IGLSLKTVIDQMREQVQNVE" gene 1678626..1679267 /locus_tag="RTM1035_08144" CDS 1678626..1679267 /locus_tag="RTM1035_08144" /note="COG0194 Guanylate kinase" /codon_start=1 /transl_table=11 /product="Guanylate kinase" /protein_id="jcventer:1101493006649_RTM1035_08144" /db_xref="CDD:30543" /translation="MSNRRGLLIILSSPSGAGKSTLSRRLRDWDPTIAFSVSATTRAP RPGEVDGQDYHFMSQPQFKQDVAAGDMLEHAHVFGNFYGSPRGPVQAAIDAGRDVLFD IDWQGAQQIRNSALGAHTLSIFLLPPSIRELHRRLETRGQDAPDVIAKRMEKSWDEIS HWDGYDFVLVNEDLDATEARLKTIIEATRLRRSQQPGLTAHVRALQTEFEEMQ" gene 1679264..1679785 /locus_tag="RTM1035_08149" CDS 1679264..1679785 /locus_tag="RTM1035_08149" /note="COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily" /codon_start=1 /transl_table=11 /product="bacterial transferase family protein" /protein_id="jcventer:1101493006649_RTM1035_08149" /db_xref="CDD:31007" /translation="MTIYTLDGHAPQIAEDSWIAPDANLIGKVVIEDLASVWFGCTLR GDNEEIRVGAGSNVQENCVMHTDMGYPLVIGPGCTIGHKAMLHGCILEENVLIGMGAT VLNGARIGRNSLIGAGALITEGKEIPEGSLVMGAPGRVVRSLDAAAIATLRATALHYQ QNMRRYRTGLVAL" gene 1679792..1680838 /locus_tag="RTM1035_08154" CDS 1679792..1680838 /locus_tag="RTM1035_08154" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="histidine kinase" /protein_id="jcventer:1101493006649_RTM1035_08154" /db_xref="CDD:34607" /translation="MQGLATVLAGIPLAAILVGPDDRIIAANQGARDHLGQGLEGRHL LTALRQPDVLEAIEASLRDRQPRKITYQTSEAGRDSSFQVHVGYVETLDARGTLVCFE DLTEREHAAQMRRDFVANVSHELRTPLTALMGFIETLQGPARHDQAAIDRFLGIMQSE AARMERLVRDLLSLSRVESEERVRPREEVNLGQVIGSVLHALRPLARDRACEITFEAP DGMIVRGNDDQLQQVFTNLIENAIKYGGTGNHITITLERIVRDATLRAPAILARVRDQ GPGIEPLHIPRLTERFYRVDTHRSREMGGTGLGLAIVKHIVNRHRGRLRISSTLGEGA EFSVILPQWDRQEA" gene 1681004..1682041 /locus_tag="RTM1035_08159" CDS 1681004..1682041 /locus_tag="RTM1035_08159" /note="COG0226 ABC-type phosphate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC phosphate transporter, periplasmic phosphate-binding protein" /protein_id="jcventer:1101493006649_RTM1035_08159" /db_xref="CDD:30575" /translation="MLFKSTVSALALTALAAGTAAARDNIQIAGSSTVLPYAAIVAEA FGENFDFPTPVVESGGSGAGRKKLCEGVGENTIDIANSSSRIKQSDIDLCAQNGVTEI MEVRIGYDGIVFASDINGPAYAFTPADWHAALAAQVSKDGALADNTNKVWSDVRADLP GDEILAFVPGTKHGTREVFDEKVIIAGCEENGTYDLHLAANGGDEKAAEKACMALRTD GVSIDIDGDYTETLARVDANKNGIGVFGLSFYQNNTDKLQVATMGGVVPSVESIASGE YPVSRPLFFYVKNAHLDVIPGMQEYIEFFVSDEISGPDGPLSAYGLVSDPELAKTQEM VANRVPMGVLN" gene 1682102..1683259 /locus_tag="RTM1035_08164" CDS 1682102..1683259 /locus_tag="RTM1035_08164" /note="COG0573 ABC-type phosphate transport system, permease component" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter, permease protein" /protein_id="jcventer:1101493006649_RTM1035_08164" /db_xref="CDD:30918" /translation="MSTGYITLIVLGLCGLGFFLGRARAYATSKTTGKKLHSLPNYYG QAVALYTAVPALLLMLAWLFLQPLMIEGRVAGMIPDSVIPEGGAKSLVMADVRRIAGG LDALMAAGEMSEDDLGAMRADFTDIRNRLGTVGVALGSDVPVPVFEAAKELRKSQNAG NFLMTLAVLGLSLGLLAWSWSRVHPDQRARNASETFVLALLIGASLVAILTTAGIVAS LLFETINFFKMYPARDFFFSTVWNPQFRGGSDLGILPLLWGTLYVSFLALLVAVPLGL MIAIYLAEYASKPLRAFAKPAIEVLAGIPTIVYGLFALITVGPFLRDYIASPLGLGTS SSSVLTAGLVMGIMLIPFVSSLSDDIINAVPQSMRDGSYGLALPNPKPSSR" gene 1683256..1683561 /locus_tag="RTM1035_08169" CDS 1683256..1683561 /locus_tag="RTM1035_08169" /note="COG0573 ABC-type phosphate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC phosphate transporter, inner membrane subunit PstC" /protein_id="jcventer:1101493006649_RTM1035_08169" /db_xref="CDD:30918" /translation="MILPAALPGVVGAILLAASRAIGETMIVVMGAGAAAKLGLNPFE AMTTITVKIVSQLTGDTEFASPETLVAFALGLTLFVFTLGLNVIALVIVRKYREQYE" gene 1683558..1684910 /locus_tag="RTM1035_08174" CDS 1683558..1684910 /locus_tag="RTM1035_08174" /note="COG0581 ABC-type phosphate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC phosphate transporter, inner membrane subunit PstA" /protein_id="jcventer:1101493006649_RTM1035_08174" /db_xref="CDD:30926" /translation="MTDFTASDAVPAPRKGSLLTQDARTKQRNAKEARFRMMGLVAVT IGVLSLVGLLASILASGLSSFQQTYVELEVYLDPAKLDKNGNRNRDDIAKVSTFGYTP LIEAAMVAAIERTGVTSDVANAKAAGELISKEAPATLRDFVLANPDRIGETVPFDLLA AGRIDGFFKGRVTMESAALDRNVSPEQLQLAQQLKDAGILTTKFNWAFFTAPDASDTR PEAAGLGVAIIGSAYMMLIVLVLSLPLGVAASIYLEEFAPKNRWTDLIEVNISNLAAV PSIVFGILGLAIFINMVGLPQSAPIVGGLVLTLMTLPTIIIATRAALKSVPPSIRDAA LGVGASKMQAIFHHVLPLAMPGILTGAIIGLAQALGETAPLLLIGMVAFVREYPAGPP EGFFDPAAALPVQVYNWTQRGDPAFVERASGAIIVLLVFLVIMNIAAILLRRRFERRW " gene 1684927..1685727 /locus_tag="RTM1035_08179" CDS 1684927..1685727 /locus_tag="RTM1035_08179" /note="COG1117 ABC-type phosphate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC phosphate transporter, ATPase subunit PstB" /protein_id="jcventer:1101493006649_RTM1035_08179" /db_xref="CDD:31314" /translation="MYDAPKFAETTVTNNDIKIAARKVQVYYGATHAIKDVDVDILDK TVTAFIGPSGCGKSTFLRCINRMNDTIDICRVEGDIRIDGEDIYDKKVDPVQLRAKVG MVFQKPNPFPKSIYDNVAYGPRIHGLARTKADLDEIVEKSLRRAALWNEAKDRLDQPG TGLSGGQQQRLCIARAVATSPEVLLMDEPCSALDPIATAQVEELIDELRQEFSVVIVT HSMQQAARVSQKTAFFHLGHLVEFGDTGQIFTNPKDERTESYITGRIG" gene 1685738..1686466 /locus_tag="RTM1035_08184" CDS 1685738..1686466 /locus_tag="RTM1035_08184" /note="COG0704 Phosphate uptake regulator" /codon_start=1 /transl_table=11 /product="phosphate transport system regulatory protein PhoU" /protein_id="jcventer:1101493006649_RTM1035_08184" /db_xref="CDD:31048" /translation="MSDHQHIVSSFDRDLETIQAHIMKMGGMVERAISDAARSLETRD DELAEEVRGRDKAIDALEEQINEEAARVLALRSPAARDLRVVLTVIKISASLERIGDY AKNMAKRTSVLSQMAAVNGSPSALRRMAREVEEMLKDVLDAYIQRDMDLAHEVIRRDL DVDQMYNAIFREFLTFMMEDPRNITPCMHLHFIAKNTERMGDLVTSIAEQVIYLVSGQ FPDDPRPKSDTTSVDPSLAPKGSH" gene 1686482..1687171 /locus_tag="RTM1035_08189" CDS 1686482..1687171 /locus_tag="RTM1035_08189" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="phosphate regulon transcriptional regulatory protein PhoB" /protein_id="jcventer:1101493006649_RTM1035_08189" /db_xref="CDD:31088" /translation="MSADQPTVLLVEDEPAQREVLGYNLQADGFHVLTASNGEEALLM VAEMPPDIIVLDWMMPNVSGIEVCRQLKTRSETRGIPIIMLSARSEEVDRVRGLETGA DDYVIKPYSLVELMARVRAQLRRTRPATVGERLEYLDIVLDAETHRVTRCEKPLKLGP TEFRLLSTFMEKPGRVWSREQLLDRVWGRDIYVDTRTVDVHIGRLRKALCQHGGDDPL RTVRGAGYALG" gene complement(1687178..1688089) /locus_tag="RTM1035_08194" CDS complement(1687178..1688089) /locus_tag="RTM1035_08194" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006649_RTM1035_08194" /db_xref="CDD:30928" /translation="MTLPRRFLPSIASLRALEALDRLGSATAAAAELSQTQSAVSRQL KTLEDQLGVGLVVRQGRGIHLTPEAADYADKIRGALQQIAQASLKLTTDPAGGSLSLA ILPTFGMRWLVPRLAEFARLYPEVTINLSTRLKPFNFVTEPFDAAIHFGKHDWLGTEA LRLRTERVVAVATPEFLAAHAPIERAADLMRLPLLQIETRPGAWPAWFEAQGVTGAKV SGTIYDQFSTITQAALHGLGVALLPDYLAEQDLATGRFRSAWGDKTLISGAYYLVWPV QNARDPALCKFRDWLAGQAEDEDLLPR" gene 1688193..1689416 /locus_tag="RTM1035_08199" CDS 1688193..1689416 /locus_tag="RTM1035_08199" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="glutaryl-CoA dehydrogenase" /protein_id="jcventer:1101493006649_RTM1035_08199" /db_xref="CDD:29651" /translation="MNANTPTLRAKDAPDLNSFDWADPFRLNDQLSEEERMIAASART FAQEVLQPRVIAAYREERVDPDIFKEMGQMGLLGTTIPEEYGGLGANYVTYGLVAREI ERVDSGYRSMMSVQSSLVMYPIYAYGSEEQRRKYLPGLASGDLIGCFGLTEPDAGSDP AGMKTRAVRTTGGYRLTGSKMWISNSPIADVFVVWAKSEAHDGKIRGFILEKGMKGLS APKVGGKLSLRASVTGEIVMDNVEVPESALLPNVQGLKGPFGCLNRARYGIAWGVMGS AEFCWHASRQYGLDRKQFNRPLAQTQLFQLKLANMQTEITLGLQAALRVGRLMDEANA APEMISMIKRNNCGKALEIARHARDMHGGNGISEEFQVIRHMVNLETVNTYEGTHDVH ALILGRAQTGLQAFF" gene 1689420..1690679 /locus_tag="RTM1035_08204" CDS 1689420..1690679 /locus_tag="RTM1035_08204" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08204" /db_xref="CDD:31009" /translation="MPGLGNLWRASAVETFTAQPLRGERMVDLAIIGAGFTGLSAALH AAGQGADVAVLEAETVGEGGSGRNVGLVNAGLWLPPDDVCKILGPGPGEHLNAVLAEA PSLVFDLIAQHGIACEATRNGTLHLAHAPKAMADLQSRHAQLAARGAPVRLIDMNSTA QRTGTDRFYGALHDARAGTIQPLSYARGLARAAHDAGALICEQTPVTAAEHRSGQWII TTPGGKLRARHLLIATNAYHRPVTHVSRPDVPIVEYFQLATAPIGDNLAGDILAGGEG CWDTGLVMTSVRRDGAGRVILGGMGGDVTVHANWARRKLTQLFPRLAGVEIQHAWAGR IAMTHDHLPRIQRMGPGALAIFGYSGRGIGPGTVFGRAAALALLSGDHSGLPVPVVES HAEQFVTLKSLYYETGARLVHAVAARG" gene 1690771..1692177 /locus_tag="RTM1035_08209" CDS 1690771..1692177 /locus_tag="RTM1035_08209" /note="COG0534 Na+-driven multidrug efflux pump" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /protein_id="jcventer:1101493006649_RTM1035_08209" /db_xref="CDD:30880" /translation="MALTDTGGSFTQGNLFRHISVMSFTSSIGLMAIFAVDLIDILFI AMLGREELAAAAGYASTIMFFASAINIGLSIAAGALVAQAEGRKDRAAAREAASATAV FAMAVGLLVPLLALPFVNEILGLVGADGAMRDMAATYLWIILPSTFVSGLSMVAVAVL RAYGDARGAMYPALLGAGVNLVLDPILIFSLNMGLEGAAVATVFARIATMALALGYAI SRYQAFAKPHFACVARDCGGAIKIAAPAMLATVATPVGAAIVTREMAKYGADAVAGMA VINRLVPVVFSVVLALSGAIGPIFGQNFGAGRLDRVQETFFDGLKFLALYVLTMSALL FVLRGPIADLFDATGQMRSLLYLYLGPLALASFFNGAIFIANASFNNLGHPGYSTWIN WARNTLGIWPFAVAFGMIWGAPGVLLGQALGGVVFAGVATWLSLRVIEAPCKDPLLGH FSCPDQRMQVVMNRCSRS" gene 1692427..1692870 /locus_tag="RTM1035_08214" CDS 1692427..1692870 /locus_tag="RTM1035_08214" /EC_number="4.2.1.10" /note="COG0757 3-dehydroquinate dehydratase II" /codon_start=1 /transl_table=11 /product="3-dehydroquinate dehydratase" /protein_id="jcventer:1101493006649_RTM1035_08214" /db_xref="CDD:31100" /translation="MTALLFLNGPNLNLLGTRQPEVYGHTTLADIETMCQDAARQRGV TLAFFQSNHEGALLDQIHAARGTYDGIILNAGAYTHTSVALMDAISSVAIPTIELHLS NVHAREAFRHQSYIARVAVGVICGFGAQGYVLALDAMLGHLERAG" gene 1692867..1693622 /locus_tag="RTM1035_08219" CDS 1692867..1693622 /locus_tag="RTM1035_08219" /note="COG2771 DNA-binding HTH domain-containing proteins" /codon_start=1 /transl_table=11 /product="autoinducer-binding transcriptional regulator, LuxR family protein" /protein_id="jcventer:1101493006649_RTM1035_08219" /db_xref="CDD:47728" /translation="MIEAARVNTLLNAATIEELWDHHTQFMAEYGFDRLIYGYTRYRT ATSLGDPDDFLMLTNHDPCYTNVFVGEGLYFNAPMVRWALENEGACSWSVLRHMTDSG TLTPQERRVVEFNHAHGVTAGYSISFKSFSPRTKGAIALTARKGVTQSEVDDLWERCG EQILALNNVAHLRILSLPYCAPGRALTLRQRQVLGWVGDGKTIQDTATIMGLTPATVE KHLRLARQALSVETTAQAVLKAAFQNQIFFIEK" gene complement(1693999..1694871) /gene="tsf" /locus_tag="RTM1035_08224" CDS complement(1693999..1694871) /gene="tsf" /locus_tag="RTM1035_08224" /note="COG0264 Translation elongation factor Ts" /codon_start=1 /transl_table=11 /product="elongation factor Ts" /protein_id="jcventer:1101493006649_RTM1035_08224" /db_xref="CDD:40966" /translation="MAITAAMVKELRESTGAGMMDAKKALTETDGDMEAAVDWLRTKG LAKAAKKSGRTAAEGLVAVKVANGVGVAVEINSETDFVAKNADFQGMVAAIAEAAVGV ADVDALKAATVNGKAVADLVTDKIATIGENMALRRMARVEGDGVVAYVHNAAAEGMGK IGVLVAFKGDEGFARQVAMHVAATNPAALNEAVLDPAIVEKERQVQIDIARESGKPDA VIEKMIVGRMAKFMAEVTLMGQAFVMNPDLTVEAAAKEAGTEISAFVRLEVGEGIEKK EEDFAAEVAKVAQG" gene complement(1694949..1695629) /gene="rpsB" /locus_tag="RTM1035_08229" CDS complement(1694949..1695629) /gene="rpsB" /locus_tag="RTM1035_08229" /note="COG0052 Ribosomal protein S2" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S2" /protein_id="jcventer:1101493006649_RTM1035_08229" /db_xref="CDD:40413" /translation="MGEFIYGARNGIHIMDLTQTVPLLDAALHAIRETVAKNGRILFV GTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSKSIQRLKQIDEMMEHGAEGL TKKERLGIERDQIKLQASLGGIREMGGVPDMLFVIDVKKEALAVAEANKLGIPVVGIV DTNCSPAGIDYIIPGNDDAARAIALYCDLVSRAALDGMSAQLGAAGVDMGALENLPVE EALAEAES" gene 1695971..1696666 /locus_tag="RTM1035_08234" CDS 1695971..1696666 /locus_tag="RTM1035_08234" /note="COG2928 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08234" /db_xref="CDD:32752" /translation="MNTPFDDLPPPPRKPKRFGGLRASFLTGLVVIAPVGLTVWLMWT LIGWVDGFVLPLIPAQYQPEQYIGINLRGVGVIIFLIFTVLVGWVAKGLIGRSLILFA ESLVNRMPVVRSIYSGVKQIAETVFAQSERSFEKACLVEYPRKGIWAIGFISTEARGE INQKARTDGAVLSVFVPTTPNPTSGFLLYFPREDVIELDMSIEDAAKLVISAGLVYPD QKKSEEMRKKSED" gene complement(1696797..1697591) /locus_tag="RTM1035_08239" CDS complement(1696797..1697591) /locus_tag="RTM1035_08239" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-hydroxybutyrate dehydrogenase" /protein_id="jcventer:1101493006649_RTM1035_08239" /db_xref="CDD:40206" /translation="MFIGRNRMTVKGKTAVITGSNSGIGLGIAEELARAGVNVVLNSF TDSEEDHALAARIAKETGVEVRYIQADMSKGDQCRALIEKAGRCDILVNNAGIQHVAP IDAFPSEKWDAIIAINLNSAFHTTAAALPMMRKAGWGRVINIASAHGLTASPYKSAYV AAKHGIVGLTKVTALETAKEPITANAICPGYVLTPLVEAQIPDTMEKYGMGREEVIEK VMLERQPSKEFATTEQLGGTALFLCSDAAAQITGTTISVDGGWTAL" gene 1697898..1699676 /locus_tag="RTM1035_08244" CDS 1697898..1699676 /locus_tag="RTM1035_08244" /note="COG4166 ABC-type oligopeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006649_RTM1035_08244" /db_xref="CDD:33908" /translation="MLLVWAGGPGLAAPAHGIAMYGAPALPPDFVSLPYANPDAPKGG RVVTGNVGGFDSLNPFILRGTPPWQLADLTHETLMGRSWDEPFTLYGLLAESVETDED RTWVEFTLRPEARFSDGAPVTIEDVIWSYETLGTAGHPRYRGFWTKVASIAQTGPRSV RLTFSEEDRELALLAGLRPILQKSQWQGRDITEAGIEDIPLGTGPYVVSDYEVNRHVT LKRNPDYWGRALPLRRGTNNFDEIRIEFYGDDTVLKEAFKAGLVSYVREFNAEAWASQ YDFPAVQRGDITLSEIPHGKPSGMTGFVMNTRRAPLDDWRVREALITAFNFEYINDTL TGGRQPRITSYFSGSELGMDHGPATGRVRALLDPFADTLPPGTLEGYSLPVGDGTARN RGNLRRAADLLQEAGWRVENGQLVNAAGQPLTLTVLLQQDGLMAQASAMMDIYTRALE RLGITLKLEMTDKAQYAEREAQFDFDLTMMRRSLSLSPGNEQTFYWGAEYADQPGSRN LMGMKSPAAEAMIRAMLTARDRTEFVAATRALDRVLTAGRYVIPIHQYSVGRIAHKSQ LTYPSERLPIYGDGIGFLPEVWWLQD" gene complement(1699673..1699948) /locus_tag="RTM1035_08249" CDS complement(1699673..1699948) /locus_tag="RTM1035_08249" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08249" /translation="MGGGVKGKGMDTSGSRENRPVPKREQAIKRLGKGAPSGSEPALN AACRPGYIPSYTINRGASGQRREKGERNQFSHGFACHLPVSAAIFYY" gene 1699967..1701004 /locus_tag="RTM1035_08254" CDS 1699967..1701004 /locus_tag="RTM1035_08254" /note="COG0787 Alanine racemase" /codon_start=1 /transl_table=11 /product="alanine racemase" /protein_id="jcventer:1101493006649_RTM1035_08254" /db_xref="CDD:31130" /translation="MSTATLTIDLDAIVANWRALDAMNTSETAAVVKADAYGLGAARV APTLARAGARHFFVAVAEEGAPLRETLGAVPAIYVFSGHMPGDAEMLRAHKLIPMINS LDQMIRHAEALPGHPFGIQLDSGMNRLGMEPAEWAALRQIALAQNPTLIMSHLACADE PDHAMNPQQLATFREMTDGLDVPRSFANTGGILLDAAYHFDLARPGIGVYGGRPFDAA HPVVTLEIPVIQCRDLLPGETVGYANSFTANRPTRIATVAAGYADGILRAMGPKTSLW ADDTPCPIAGRISMDLICVDITDLGHDPASLNLLGPHQTIDTLADNAGTIGYEILTSL GARYTRRYIGG" gene 1701001..1701786 /locus_tag="RTM1035_08259" CDS 1701001..1701786 /locus_tag="RTM1035_08259" /note="COG0767 ABC-type transport system involved in resistance to organic solvents, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, inner membrane subunit" /protein_id="jcventer:1101493006649_RTM1035_08259" /db_xref="CDD:42383" /translation="MSFILGFLASIGRTVLSGLAAIGRIALFAADTISQLARPPFYFR EFLHALVQIGWLSLPVVGMTALFTGGALALQIYAGGARFNAETVVPSIVAIGLTRELG PVLGGLMVAARVASSIAAEIGTMKVTEQIDALTTLSTNPMKYLTLPRVLAATLAVPVL VGVGDVLGIMGGFLVGVGRLDFSAATYLHNTIDFLETWDVVSGLIKGAAFGFIVALMG CYYGMNSGRGAQGVGRATKSAVVAASVLILASNYLLTELFFAS" gene 1701783..1702529 /locus_tag="RTM1035_08264" CDS 1701783..1702529 /locus_tag="RTM1035_08264" /note="COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006649_RTM1035_08264" /db_xref="CDD:31324" /translation="MIELHNVHKAFGSNRVLRGVDLTIPSATSLVIIGGSGTGKSVAL KCILGLIRPDSGTITLDGQDVTKGDRDAFLARFGMLFQGGALFDSLPVWQNVAFRLLR GSLKRPLSEAREIAIEKLRRVGLKPDVADKFPAELSGGMQKRVGLARAIAAEPEIIFF DEPTTGLDPIMAGVINDLIREIVTEMGATAMTITHDMTSVRAIADNVAMLHDGVIKWT GPVSEMDHSGDPYLDQFIHGRAEGPIEAVR" gene 1702598..1702987 /locus_tag="RTM1035_08269" CDS 1702598..1702987 /locus_tag="RTM1035_08269" /note="COG2995 Uncharacterized paraquat-inducible protein A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08269" /db_xref="CDD:32814" /translation="MRAGIDLPLFGLSEISIISGLQALWQSDVYLALLVTVFALFAPY LKTIGLALLDFGLLSPRALPALHLLGKLAMADIFLIALYIIVVKGVGLARVEVAWGLY LFTACILASLAISLRHRHNPPNPPDTV" gene 1703102..1703887 /locus_tag="RTM1035_08274" CDS 1703102..1703887 /locus_tag="RTM1035_08274" /note="COG1196 Chromosome segregation ATPases" /codon_start=1 /transl_table=11 /product="predicted repair protein" /protein_id="jcventer:1101493006649_RTM1035_08274" /translation="MIFQGEVMTATLKSAALLTHSILQRLAFITFLLCALCFSAATIA ASIGALPWLQFSVAFGGTLYDNAGQITQIGLTVLAVLLCVFLPANARIMALETSHRRF NIGMQDVARAYHAAHAADRAGLFRLSSEFDAVRERLAYLRDHPDLGTLEPDLLEVAAQ MSHISRELAQVYSDDRIARARNFLTQRQQEVEAFNARLDQAKQITRELKHWSHEVELE ESVAASQLQRLRDDLRDVLPELGLEDVLRHDGTVIDITQKAAE" gene 1703943..1705307 /locus_tag="RTM1035_08279" CDS 1703943..1705307 /locus_tag="RTM1035_08279" /note="COG1066 Predicted ATP-dependent serine protease" /codon_start=1 /transl_table=11 /product="DNA repair protein RadA" /protein_id="jcventer:1101493006649_RTM1035_08279" /db_xref="CDD:31265" /translation="MAKPGTFTCTACGAVHNRWSGRCDACGEWNSIIEEAPLSTGPKG KTLGGKRGTPLILTDLSTEEAPPPRTLSGIGELDRVLGGGLVPSSAILVGGDPGIGKS TLLLQAAARFAGAGLKTFYISGEEASAQVRMRAQRLGLGEAPVKLAAATSLRDILTTM ESEKPDLVIIDSIQTVWSDTVEAAPGSVSQVRAAAHELTSFAKRFGTSVILVGHVTKD GQIAGPRVVEHMVDCVLYFEGERGHQFRILRSVKNRFGPADEIGVFEMTGAGLAEVAN PSALFLSGRGAPTPGSVVFSGIEGTRPLLVEMQALVAPTPHAQPRRAVVGWDGARLAM ILAVLEARCGIPFAGLDVYLNVAGGLKISEPAADLAVAAALLSAREDTALPAETVVFG EISLSGALRPVGQTENRLKEAQKLGFTAAITPSGGKTTGDSGLKLTHMGDLTTFVGDI FGAG" gene 1705334..1705894 /locus_tag="RTM1035_08284" CDS 1705334..1705894 /locus_tag="RTM1035_08284" /note="COG1286 Uncharacterized membrane protein, required for colicin V production" /codon_start=1 /transl_table=11 /product="CvpA family protein" /protein_id="jcventer:1101493006649_RTM1035_08284" /db_xref="CDD:42635" /translation="MEGFTIIDGVVALFIVLSALLAYSRGFVRESLAIAGWVVAGILA FIFAPQVEPLVKEIPVIGEFIADSCELSMIGAFAVVFAVGLIIASLITPLFSSLVQRS VLGGLDQGLGFVFGVARGVLLIAIAYFVYQTVISSQSIQIIDDSRSARVFSQLTGKIE DRNPDEALGWITRQYEQLIAKCEAPQ" gene 1705898..1706347 /locus_tag="RTM1035_08289" CDS 1705898..1706347 /locus_tag="RTM1035_08289" /note="COG3238 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08289" /db_xref="CDD:33050" /translation="MLPQSPVLALFFMAVAGLAVAIQAPLNSALGRSIESSVAAAAVS FGVGFVALVLLVALSGDSAAFGRAALAPRWLLLGGLLGAFFVWASLWSVPVLGVLTTT AALILGQMVGSMVLDYIGAFGIAARDLSWTRLTAALLVGTGVILSRF" gene 1706438..1707925 /locus_tag="RTM1035_08294" CDS 1706438..1707925 /locus_tag="RTM1035_08294" /EC_number="2.4.2.14" /note="COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase" /codon_start=1 /transl_table=11 /product="amidophosphoribosyltransferase" /protein_id="jcventer:1101493006649_RTM1035_08294" /db_xref="CDD:30383" /translation="MDSELPALPKHMPPAHPFDDDKLKEECGIFGVIGLTDAANFVAL GLHALQHRGQEAGGIVSHCPDQGFNSVRRFGYVRDNFTSQSLMETLPGPLAIGHVRYS TAGAKGAAIRDVQPFFGEFSMGGAAIAHNGNITNAIALRKELIERGSIFQSGSDTECI IHLMARSLQRNIPERMEDALRRVEGAFSVVAMTRSKLIGVRDPLGVRPLVLGQLGEGW VLSSETCALDIIGATFVREIEPGEMVVISAKSGVESHFPFRRQSSRFCIFEHVYFSRP DSIIGGRSVYETRHQIGVELAREAPVDADLVCPVPDSGTPAAIGYSHESGIPFAMGII RNQYMGRTFIEPTEQIRNMGVRLKLNVNRALIEGKRVILVDDSVVRGTTSRKIKEMIL DAGAAEVHFRIASPPTAWPCFYGVDTPQREKLLAATMSEDEMRDHLQVDSLKFISLDG LYRAVGEAGGRNAKCPQYCDACFSGEYPVAPSDMIEKGFALKAAE" gene 1708081..1708341 /locus_tag="RTM1035_08299" CDS 1708081..1708341 /locus_tag="RTM1035_08299" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08299" /translation="MTDQTETPLATLEAATLRGALPDAGLVLLGTLHGPSHARALLRV KGAVHTVEVGTDLGSATVAAIGEGVVILARAGRSERLSLPAS" gene complement(1708419..1708988) /locus_tag="RTM1035_08304" CDS complement(1708419..1708988) /locus_tag="RTM1035_08304" /note="COG1268 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="BioY protein" /protein_id="jcventer:1101493006649_RTM1035_08304" /db_xref="CDD:31459" /translation="MRDTVLTKAVIGHDTVLRKVGLVLGGSFLIAVAAQISVPFYPVP LTLQTLAILMVGLTFGSRLGALTLLAYLAEGAMGLPVFAGGLNGVALMGPTAGFLFGF VAMAYLAGLAVERGLARGVVSTALCGMGISALLYIPGLAWPAAMLGKSADALWSGWMA PFLLGDAVKAVIAAMIVTGATVLIRARKG" gene 1709096..1709749 /locus_tag="RTM1035_08309" CDS 1709096..1709749 /locus_tag="RTM1035_08309" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="oxidoreductase, short-chain dehydrogenase/reductase family protein" /protein_id="jcventer:1101493006649_RTM1035_08309" /db_xref="CDD:40206" /translation="MDTSTPLPIALVTGASRGLGAAMAEALAKTHHVVAVARTTGALE ELDDRIQAAGGQATLAPMDITNTGAMAQLCRSIHDRWGAVATWVHAAVHAAPLTPVAH LSEGDWAKSVACNVTATGILIPFIAPLLGTDGQAVFFDDPRAGEKFYGAYGATKASQI ALARSWQAETAKTGPRVHILAPAPMPTATRARFHPGEDREGLASPRDEAARLMAALS" gene 1709823..1710605 /locus_tag="RTM1035_08314" CDS 1709823..1710605 /locus_tag="RTM1035_08314" /note="COG0496 Predicted acid phosphatase" /codon_start=1 /transl_table=11 /product="Survival protein SurE" /protein_id="jcventer:1101493006649_RTM1035_08314" /db_xref="CDD:30842" /translation="MRILITNDDGINAPGLAVLDEIANALAGPDGEVWTVAPAFEQSG VGHCISYTRPMMISKMAERRYAAEGSPADCVLAGLHDVMKDARPDLVLSGVNRGNNAA ENAVYSGTVGAAMEAALQGVPAVALSQYYGPANRDLDDTFEAARVHGLPTLKRLLDKG VWTRDDYGIFYNINFPPFPASGVKGIRAAHQGFRRDMGFGVEPHVAPSGRRFLWVTGA PQNEPTSPGSDADVNLQGYISVTPMRADLTAHDALEALKAIE" gene 1710602..1711261 /locus_tag="RTM1035_08319" CDS 1710602..1711261 /locus_tag="RTM1035_08319" /note="COG2518 Protein-L-isoaspartate carboxylmethyltransferase" /codon_start=1 /transl_table=11 /product="Protein-L-isoaspartate O-methyltransferase" /protein_id="jcventer:1101493006649_RTM1035_08319" /db_xref="CDD:32588" /translation="MTDDEDHSSAERKMQFLFALRSKGVTDARVLTAMEQIDRGPFIR GYFAERAYEDMPLPIACGQTISQPSVVGLMTQALKVTNRDKVLEVGTGSGYQAAILSQ LARRVYTVDRHKRLVTEASEIFRALDLTNITALTADGSFGLPDQAPFDRIIVTAAAED PPGPLLAQLKIGGIMVVPVGQSDAVQRLIRVTRHEAGFDYDELRPVRFVPLVEGLGRD G" gene 1711366..1712568 /locus_tag="RTM1035_08324" CDS 1711366..1712568 /locus_tag="RTM1035_08324" /note="COG0739 Membrane proteins related to metalloendopeptidases" /codon_start=1 /transl_table=11 /product="LysM domain/M23/M37 peptidase" /protein_id="jcventer:1101493006649_RTM1035_08324" /db_xref="CDD:41596" /translation="MIEMRKFSRSAPLLATMAFALAACDKPLDLDMRGAFGNAPSTAE AARNATAPRPQPDARGIISYPGYQVAVAERGDTVGSLARRIGADPGEIARFNGVQTGD PLRKGEIIALPGRVAEPLGGPIQSPSGVDIGSIADGAIRRADSQTVTATALPPATPGT ATAPAQVGAEPVRHKVERGETAFSIARLYNVSIRSLADWNGLGPDFAVREGQFLLIPV ALPGEKTEPFDEADVVAVTPPGAGTPTPTPPSASKPLPDEVTTPKAAPVEKIAAPDLG KTETKTTSARMAFPVKGDIIREYAKGRNDGIDISAAPGAPVVAADAGTVAAITEDTNG IPIIVVKHAGSLLTVYSNVEGLTVKKGDSVTRGQKLAEIRRTGTPALHFEVRDGFDSV DPMGFLGG" gene complement(1712581..1712751) /locus_tag="RTM1035_08329" CDS complement(1712581..1712751) /locus_tag="RTM1035_08329" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08329" /translation="MIRAHVTGAVLVLIVAIVAFDAGTAEPLNPYTAPPMLALGSGMA AAGAHCAAPPPK" gene complement(1712748..1713851) /locus_tag="RTM1035_08334" CDS complement(1712748..1713851) /locus_tag="RTM1035_08334" /note="COG2391 Predicted transporter component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08334" /db_xref="CDD:44057" /translation="MSSSPGALSRLLALAAVAAVVLAVALFAGPRYGLLLLIGLGFGL ALEGFRFGFTGPWRRMILERDASGLLAQLICIALVASVAFPLLAANGAELKGAHAPIG VAMIGGAFVFGAAMQIVLGCGSGTLVNAGSGNAIGAVALPFFAIGSFAGAYHLTWWTN LGSLPVVALSGGQGLAITMVGLGAVAALALMVGKPGSYRLPARYWGAILALAGLAILH LVVAGQPWGVVYGLGLWVAKVVVAVGGDLSGSAFWSAPGNQGQVAASVLTDVTSLTDF GLIGGAALMAWWRAGLASPVGVLPARAWAAVIIAGLVLGYSSRLAFGCNIGAFFSGIG TGSAHGWVWFVAAFAGSWVGVRLRPFLGLEARK" gene complement(1713900..1714886) /locus_tag="RTM1035_08339" CDS complement(1713900..1714886) /locus_tag="RTM1035_08339" /note="COG2897 Rhodanese-related sulfurtransferase" /codon_start=1 /transl_table=11 /product="Probable Rhodanese-related sulfurtransferase" /protein_id="jcventer:1101493006649_RTM1035_08339" /db_xref="CDD:32722" /translation="MPGLGTASEHQGEITMFDSFRKLGLAAALAVAPLTAMAQLGPLT NPEEVTQAQATQEAIVLDIRPGDAYEAGHIPGAIPAPYGLFRGPADNPGQIVPEDKMT EVLRSLGVTAGRPIVVVHQGSDQTDFGAAARVYWSLKSSGLTDLAILNGGMNAWEQAG KPTATGAAGAITPSDITVTYDPTWTATREDVKAIIDGKDSAELIDARPEAFWKGETKH AAATQPGTLPQSRYFTHDRWFGNDEPSLIKPDLIRELATKNGFEAGDRLVSFCNTGHW AATNWFALSEVAGIEGVRMYPESMVGWSNAGYDMANVPGLFQNLLNKITGKY" gene complement(1715037..1716446) /locus_tag="RTM1035_08344" CDS complement(1715037..1716446) /locus_tag="RTM1035_08344" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="nitrogen assimilation regulatory protein NtrX" /protein_id="jcventer:1101493006649_RTM1035_08344" /db_xref="CDD:32386" /translation="MSDILIVDDERDIRELISDILEDEGYATRRAGNSDEAMAAIAAE QPGLLILDIWLKDSHMDGIDILKTVKREYPDVPVVIISGHGNIEIAVAAIKQGAYDFI EKPFNIDQLMVVIRRGMETSRLRRENQALKRRETAPSEMLGEASAFRALMGQLDKVTK SNGRVMLSGPAGAGKELAARYIHANSARASAPFVTVGCASIAPERMEEVLFGRESDES GVVPGLLEEANGGVIYFDEVADMPMGTQSKILRVLVDQTFLRVGGSSKIQVDLRVISS TSRDLEAEIAAERFRRELFHRLNVVPIAVPSLEERREDIPALAEHFIAMFHKTQGLAL RSLSEEAAALLQTMRWPGNVRQLRNVIERVLILGEGSGPIAARELPSESSGPVDEGRV VLSGAIATMALREAREAFEREYLLTQINRFGGNISRTAEFVGMERSALHRKLKSLGIV TGAKGSGRGDESEDFEAFG" gene complement(1716454..1718670) /locus_tag="RTM1035_08349" CDS complement(1716454..1718670) /locus_tag="RTM1035_08349" /note="COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation" /codon_start=1 /transl_table=11 /product="nitrogen regulation protein ntrY" /protein_id="jcventer:1101493006649_RTM1035_08349" /db_xref="CDD:34605" /translation="MSRLRRLQRLQNGATLSLVLLGPVLALATYLMMGPLDQGATSNG LRLVLLCDMIYVLMVAGLVMQRVARMVAARRSRSAGSRLHLRLTGVFALMALLPTITV AVFATLSVNMGLEAWFSERVGRVVDSSVAAAQAYEEEHRRDLETDIRVLARVINATKR AAVFMTDGDIRQVLSSGQREIQRGLREAFVIDGTGEIRARGERSYLFDYERPTAAQIA EAQAEGVVVIRDWENNEFRALMPLEALPDRLLYVSRTVDGAILNLLDETKETANFYKQ RESERGRVLFEFGLLYLGFAVILILAAIWLGMWFAERLSQPVGRLTSAAQRVGEGDLD TQVREEEGDDEIAQLSTYFNQMTRQLKGQREALLTNTQQIERRRRLFDSVLGSVSSGV VGLDAEGRVTFVNRAAERLLDWSEDQQSLALNAVVPEFGALFDRLRMVPGGFVQEEIK VMRGTRQENLLVRMSTRISEAGTREGYVVAFDDVTDLVSAQRMAAWGDVARRIAHEIK NPLTPIQLSAERIKRKFAKQLPPEEAQSLEQLTDVVVRQTNDLRRIVDEFSKFARMPE PVTQQESLSQVLREVVLLQETGQPGVVFDLRLDTAPLRADIDAAMIGQALTNLVKNAG EAIETLQEKGAPDGHRPTIRIESGIEEDRAVIRISDNGIGLPQDRARLFEPYVTTRDK GTGLGLPIVKKIIEEHGGTLVLVDAEPFEAGAHAGAMAVVSLPLVVQDTVEAKLAV" gene complement(1718822..1720183) /locus_tag="RTM1035_08354" CDS complement(1718822..1720183) /locus_tag="RTM1035_08354" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="nitrogen regulation protein NtrC" /protein_id="jcventer:1101493006649_RTM1035_08354" /db_xref="CDD:32386" /translation="MDGTVLVADDDRTIRTVLTQALTRAGCRVHATSSLTTLMRWVGE GKGDVVISDVMMPDGNGLEMLPKIAQDRPGLPVIVISAQNTIMTAIKAAEAEAYDYLP KPFDLPDLMKRTARALESRARRPIREVEVERPEELPLIGRTTAMQALYRVVARIMNTD LPVMICGESGTGKSLIAKAIHDFSDRRTLPFVTVTPGDLRELDGPSRIMARVKGGTIV LDEVTDLPLEAQGRVVRMMDAPGDHVPRFMATSRVPPGQALEEGTLREDLYYRLSGAV IDVPSLRARVEDIPLLAEHFLARDERDGQPARHLSEQAAELMRAYSWPGNVRQLENAV RRIGLTAMAEEISRTEVEAVLGNQPRAEPVMREGRGESLTASVAGHLRRYFDLHGDAL PPPGLYTRVLREIELPLIEIALDATAGNQAKCADLLGINRNTLRKKITDLDINVTRRR KLM" gene complement(1720186..1721259) /locus_tag="RTM1035_08359" CDS complement(1720186..1721259) /locus_tag="RTM1035_08359" /note="COG3852 Signal transduction histidine kinase, nitrogen specific" /codon_start=1 /transl_table=11 /product="nitrogen regulation protein NtrB" /protein_id="jcventer:1101493006649_RTM1035_08359" /db_xref="CDD:33642" /translation="MSGEDAIWTSLPVPAILLDPQDRIAGINPAAEGFMMSSSRALMG QPVWDKLAVNAPLEEAFERARANDAPLFVNDVDVGTGERAPMQCNLQVAPLTGCPGHM IMLISPRELAGRMVQNSNVKSAAKSAIGMAEMLAHEIKNPLAGITGAAQLLSMTLGPE DLELTDLIVSESRRIVSLLERVEQFGNISAPDMRPVNVHDVLDRARRSAMLGFAAHMA LIEDYDPSLPLALGDSDQLLQVVLNLLKNAAEAARGRPGTIRLHTYYEQSLRVRRGEG QGKALPLQIEIIDDGPGLPPEIADQVFDPFVSGRENGTGLGLALAAKIISDHDGWISV NSVPGRTVFRISLQRAADATKEA" gene complement(1721256..1722257) /locus_tag="RTM1035_08364" CDS complement(1721256..1722257) /locus_tag="RTM1035_08364" /note="COG0042 tRNA-dihydrouridine synthase" /codon_start=1 /transl_table=11 /product="Dihydrouridine synthase TIM-barrel protein nifR3" /protein_id="jcventer:1101493006649_RTM1035_08364" /db_xref="CDD:41267" /translation="MLRIADKALATPVLLAPMAGITDLPFRNVVASFGAGLVVSEMVA SQEMVQAKPSARGKAELGLGAESTAVQLAGCDAQWMAEAARVVADHGARIIDINMGCP AKKVVSGSGSGASGSALMRDPDHALRLIEAVVGAVDVPVTLKMRLGWDHDCLNAPELA RRAESAGVAMVTVHGRTRCQFYTGAADWAAISDIVAAVNIPVIVNGDIVDSATARKAV AQSGAAGVMIGRGARGRPWVLAEVAAAMGQGAAPLVPQGAALADLVAGHYEAMLGFYG GDLGLRVARKHLGWYMDAAGTGDRLRRAVLTARTPAVVLEHLPEAMEARAMDARAAA" gene 1722419..1723561 /locus_tag="RTM1035_08369" CDS 1722419..1723561 /locus_tag="RTM1035_08369" /note="COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase" /protein_id="jcventer:1101493006649_RTM1035_08369" /db_xref="CDD:30214" /translation="MTTAALIVAAGRGTRAGGDCPKQWQPLLGRRVIDWTLDAFLGAD GIDRILVVLHPDDLGQLAPHPRITVTTGGATRSSSVRNGLEALASDPPDHVLIHDVAR CCTKSAYIAYIAYKIANTDLPALAPALPVTDALWIGAEGEVTGTRDRTGLYRAQTPQA FDFKTILAAHQAHEGDAADDVAVARAAGIKVAILDGDEDNLKITHPHDFARAEKILGN QMDIRVGSGFDVHRFGPGDHCMLCGVAVPHDRGLQGHSDADVGLHALADAIYGGLAQG DIGRHFPPSDPQWKGADSHNFLRHAVALASELGFKINNIDVTLICERPKITPHAPAMQ AALSKITGIAPDRISVKATTSERLGFTGREEGIAAQAVVTLVKTCA" gene 1723552..1724049 /locus_tag="RTM1035_08374" CDS 1723552..1724049 /locus_tag="RTM1035_08374" /note="COG1267 Phosphatidylglycerophosphatase A and related proteins" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase, putative" /protein_id="jcventer:1101493006649_RTM1035_08374" /db_xref="CDD:44515" /translation="MRLTHLICTFFYVGHLRPAPGTWGSLAALPVAWVLHLAGGPALL LVGIVLAFALGWWATHLETKGKDNHDPSEIVIDEVAGQWLAFLPVSIGASHAGADLLS LWPGFVFSFVAFRFFDITKLGPIGWADRRNDALGVMLDDILAGLAAALCVLLAAGFYH GVLDL" gene 1724046..1724516 /locus_tag="RTM1035_08379" CDS 1724046..1724516 /locus_tag="RTM1035_08379" /note="COG1546 Uncharacterized protein (competence- and mitomycin-induced)" /codon_start=1 /transl_table=11 /product="CinA-like protein" /protein_id="jcventer:1101493006649_RTM1035_08379" /db_xref="CDD:31735" /translation="MITNEILTLASTRGLMIATAESCTGGMVAAALTDVPGSSAVVER GFVTYSNTSKIEMLDVSEHTLATYGAVSEQVAQEMAQGALSHSTAHLAVSITGIAGPG GSEHKPEGRVCFGLAMAGHPTKTETVEFGPLGRSGVRENARDHALKMLFIALNE" gene complement(1724532..1724936) /locus_tag="RTM1035_08384" CDS complement(1724532..1724936) /locus_tag="RTM1035_08384" /note="COG2867 Oligoketide cyclase/lipid transport protein" /codon_start=1 /transl_table=11 /product="cyclase/dehydrase" /protein_id="jcventer:1101493006649_RTM1035_08384" /db_xref="CDD:32694" /translation="MYTLVADVASYPQFLPWTAAARVRSVRPQDDGSEIMEADLVISF KVFRERFGSRVVLWPEMRRIETEYLEGPFHHMRSNWAFHDVEGGCEVSFDVDFAFKNR LLQSAADLFFYEAMKRIVRAFEQRAQELYGAA" gene 1725056..1725604 /locus_tag="RTM1035_08389" CDS 1725056..1725604 /locus_tag="RTM1035_08389" /note="COG0634 Hypoxanthine-guanine phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="hypoxanthine phosphoribosyltransferase" /protein_id="jcventer:1101493006649_RTM1035_08389" /db_xref="CDD:30979" /translation="MPQHAYVIDKMISAKSIAARIEALSHEIKAEFAGTQKLVVVGLL RGSFIFIADLVRELDLPVEVDFVETSSYGNAMESSREVRILKDLRGDIEGRDVLVVED IVDTGHTLFHVLHLLQSRRPHKLRTIALLDKPSRREADIRADWIGFEIPDEFVVGYGI DYAQRNRNLPYIGKVRFVTEER" gene complement(1725608..1725681) /locus_tag="RTM1035_t09486" tRNA complement(1725608..1725681) /locus_tag="RTM1035_t09486" /product="tRNA-Arg" gene complement(1725730..1726950) /locus_tag="RTM1035_08394" CDS complement(1725730..1726950) /locus_tag="RTM1035_08394" /note="COG0520 Selenocysteine lyase" /codon_start=1 /transl_table=11 /product="cysteine desulfurases, SufS subfamily protein" /protein_id="jcventer:1101493006649_RTM1035_08394" /db_xref="CDD:30866" /translation="MFDVEKIRADFPILAREVNGKPLVYLDNGASAQKPQVVIDAVTR AYSMEYANVHRGLHYLSNLATEKYEAVRGIVARFLGVADEDQIIFNSGTTEGINMVAY GWAMPRMEAGDEIILSIMEHHANIVPWHFLRERQGVALKWVDVDSRGSLDPQKVIDAI TPKTKLIAITHLSNVLGTKVDVKAICDAARARGVPVLVDGSQAAVHMPLNLDEMGCDF YAITGHKLYGPSGSGAIFVRKERMAEMRPFMGGGDMIREVTRDGVTYNDPPMKFEAGT PGIVQTIGLGVALEYMMGIGMGAISAHEDDLSHYAQERLAGLNWINVQGTAPDKAAIF SFTMQGAAHAHDISTILDKKGVAVRAGQHCTGPLMEHLGVSATCRASFAMYNTREEVD VLVEALELAHELFG" gene complement(1726952..1727560) /locus_tag="RTM1035_08399" CDS complement(1726952..1727560) /locus_tag="RTM1035_08399" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08399" /translation="MGRGMTQAEFKALLLETLFRPREAARALIGFGLPQQILWMALVL MSVLNAIVYSVSLRLAPPMDPTAPTLMPPAFHSPLLFTLFLLGALVITVYALFWVGGM LGGKAAVQDVLVLICWLQVLRLILQAAVAVLVLALPTVAALLIFVSSVWGIYILTGFV DTAHRYDNMLKSFGIIILSIAAMAVGLSILLNLVGVAAMGGA" gene complement(1727545..1728030) /locus_tag="RTM1035_08404" CDS complement(1727545..1728030) /locus_tag="RTM1035_08404" /note="COG0038 Chloride channel protein EriC" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08404" /translation="MPVTTDLVATYRGPRRVVRRLLAMGPREDRALVMLIAACVVVFV AQWPRLAREAHLTGQELNPLLGASLLAWIFIAPLILYALALMSHGIARVLRGKGTAFG ARIALFWAFLAASPLILLHGLVAGFVGPGLELQGVGLLWLLVFLWFWVSGLIEAEWGG A" gene complement(1728030..1729319) /locus_tag="RTM1035_08409" CDS complement(1728030..1729319) /locus_tag="RTM1035_08409" /note="COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component" /codon_start=1 /transl_table=11 /product="SufBD" /protein_id="jcventer:1101493006649_RTM1035_08409" /db_xref="CDD:41505" /translation="MAQPQAKQTALEARLEAMTLPKGGLWATGAREAALTRLQAMGLP DRRDEYWKFTRPDSLAQAEAPHAALFLNDDEPDSFAAVDRLKLVFVDGVFDAEASDDL TLEGVRIDRLSMAAKSDIHWVRDLYGVLEERGQTPVVRPLAALNTAYASDGVLIHVTG RPSKPINLVYVHKSEVSDAILHHVIKLDPEAEVTILENGPAAARFNKVMEVDVGDGAR FHHIRTQGRDHERRAATHVFARLGAESLFKSFTLTANGVMTRNECVIELLGDDAVAHV AGAAMGDGDFHQDDTVFVTHDAQRCESRQVFKKVLRNGATGVFQGKILVKPGAQKTDG YQISQALLLDEDSQFLAKPELEIYADDVACSHGSTSGAIDEDALYYLRARGIPRPIAT DLLTLSFLAEAVEEIEDEGLREDINSQLAAWLERRRR" gene complement(1729319..1730074) /locus_tag="RTM1035_08414" CDS complement(1729319..1730074) /locus_tag="RTM1035_08414" /note="COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component" /codon_start=1 /transl_table=11 /product="FeS assembly ATPase SufC" /protein_id="jcventer:1101493006649_RTM1035_08414" /db_xref="CDD:30745" /translation="MLEINNLHVDLEEEDKTILKGVNLSVEAGTVHAIMGPNGSGKST LSYVLSGRDGYKVTDGSATLAGVDLLDMDPEERAAAGLFLAFQYPVEIPGVGNMTFLR TAVNAQRKARGEEEMSAAEFLKVVREKAKTLQIDADMLKRPVNVGFSGGEKKRNEILQ MAMLEPKMCILDETDSGLDVDAMKLVSDGVNALRDAGRAFLVITHYQRLLDHIKPDVV HIMYDGRIIKTGGPELALEVEQNGYADILAEVA" gene complement(1730107..1730712) /locus_tag="RTM1035_08419" CDS complement(1730107..1730712) /locus_tag="RTM1035_08419" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08419" /translation="MVGSDTIDRPVLTLPDAEAAHLREVYARAGVILEYGSGGSTVVA AEMQGKRVFSVESDQAWAEMMRGWFAQNPPVAGTEVDVIWSDVGPTKDWGFPRDASGW KTYAQYPLKIWDMAGFAQPDVVLVDGRFRTGCALAAALRTQRPVTVLFDDYAPRKHYH RIEDFIGAPRRMIGRMAEFEVTPQGVNPAHLLTIIEMMTRP" gene complement(1730714..1730986) /locus_tag="RTM1035_08424" CDS complement(1730714..1730986) /locus_tag="RTM1035_08424" /note="COG0393 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08424" /db_xref="CDD:41924" /translation="MDYRGIVVGEAIMGANIVRDFFAQITDVVGGRSDSYESKLREAR EVALSELEERAAELGADAVVGVDLDYEVVGDSMLMVSASGTAVVLD" gene complement(1731052..1732575) /locus_tag="RTM1035_08429" CDS complement(1731052..1732575) /locus_tag="RTM1035_08429" /note="COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component" /codon_start=1 /transl_table=11 /product="component of SufBCD complex" /protein_id="jcventer:1101493006649_RTM1035_08429" /db_xref="CDD:41505" /translation="MAAVDKVQVKDGVDQETVDAVRQVGEAYKYGWNTDIEMDYAPLG LNEDIVRLISSKNEEPEWMTEWRLEAYRRWLTKTEPEWAMVDYPKIDFQAQYYYARPK SMEVKPKSLDEVDPKLLATYEKLGIPLKEQLILAGVEGAEDAPAEGRKVAVDAVFDSV SVGTTFQKELRQAGVIFCSISEAIREHPELVKKYLGSVVPVSDNFYATLNSAVFSDGS FVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPKRDTSQLH AAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRAKVMWTQVETG SAVTWKYPSCILRGDDSQGEFYSIAIANNYQQADTGTKMIHLGKNTRSRIVSKGISAG HAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDKCGAHTVPYIEVKNNSSRVEHEATTS KVDDDQMFYCRARGMDEEEAVALVVNGFCRDVLQALPMEFAMEAQQLVAISLEGSVG" gene complement(1732593..1733636) /locus_tag="RTM1035_08434" CDS complement(1732593..1733636) /locus_tag="RTM1035_08434" /note="COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes" /codon_start=1 /transl_table=11 /product="aminotransferase, class V" /protein_id="jcventer:1101493006649_RTM1035_08434" /db_xref="CDD:31301" /translation="MQRVYLDYNATAPLRVEAREAMLDAMDLIGNPSSVHAEGRAAKG LIERARAQVATALGADGADVIFTSGATEAAALACIGRHLHGAAVEHDALTSWITPDLP ADTDGRVAVADPAQAVLQLANSETGVVQALPNGLAVSDMTQAFGKLPLAFNWSGVEMA LISAHKLGGPKGVGALVIKRGTDLAAQIRGGGQEMGRRAGTENVVGIAGFGAAAEAAG HDLAEGIWGPIEKLRNILENTIAEFSNETIFVGKAAPRLPNTSCFITPGWKGETQVMA MDLAGFAISAGSACSSGKVKSSRVLRAMGFDEAMAGSAIRVSLGPQTTEDDILRFAES WLKRLQKHRGRLA" gene complement(1733702..1734163) /locus_tag="RTM1035_08439" CDS complement(1733702..1734163) /locus_tag="RTM1035_08439" /note="COG1959 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster assembly transcription factor IscR, putative" /protein_id="jcventer:1101493006649_RTM1035_08439" /db_xref="CDD:32142" /translation="MKLSTKGRYAMVALVDIALQPAGSVVTLGDISRRQDISLPYLEQ LFVKLRRADLVKSVRGPGGGYRLMRPASEIRVTDILAAVDETIDALHKGAGASGAASG SRAQSMTNRLWEGLSAHVYVFLHQTRLSDVAGNSLAPCPAVPHLFAVVDDE" gene 1734322..1734975 /locus_tag="RTM1035_08444" CDS 1734322..1734975 /locus_tag="RTM1035_08444" /note="COG2945 Predicted hydrolase of the alpha/beta superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08444" /db_xref="CDD:32768" /translation="MPEVIFPGPEGRLEGRYHPQKEKDAPIAIVLHPHPQFGGTMNNK VVYNLHYAFYNMGFTVLRFNFRGVGRSQGEYDQGIGELSDAASALDYLQSMNNNSKHC WVAGFSFGAWIGMQLLMRRPEITGFISVSPPANMYDFSFLAPCPASGLIINGSHDRVA PPADTKSLVNKLHEQHGITITHQEVEGADHFFKEPHMDTMIGSVSTYVKRRLTENTR" gene 1734986..1735249 /locus_tag="RTM1035_08449" CDS 1734986..1735249 /locus_tag="RTM1035_08449" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08449" /translation="MGVTEDLADELARDVIKAVEATGDEMIITDVQKILGATSQTAEE AFLTAVRVRRANIKARAYLVEKLKRMKAAKEAAAGAKNDSGDA" gene complement(1735254..1737680) /locus_tag="RTM1035_08454" CDS complement(1735254..1737680) /locus_tag="RTM1035_08454" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase" /protein_id="jcventer:1101493006649_RTM1035_08454" /db_xref="CDD:30753" /translation="MKTHAQAVVIGGGVIGCSILYHLTKLGWTDVVLLERNELTSGST WHAAANIHGLHDSANISRLQHYTMNLYNELEAETGQSCGVFQPGSLYLAQTENREHQL RLQAAKAKLYGMNFHEIGRDEAERLHPLVNFDGIRCIMYEPDGGNVDPSGVTNAYAVG ARQRGAEIHRFTPVTATVQQADGSWIVETPKGNIHTPWVINAAGLWGREVAKLAGIEL PLQPTEHQYFVTEMIAEIAGLDRRLPSVADRDGEYYLRQEGKGLLIGAYERDMRFWAE DGTPLDFAHDLFPDDLERIEENMLRAIDRVPVVGTAGIKRVINGPMIWSPDSNVILGP VPELKGYFCCNGIIPGFSQSAGMGWMVAEWLINGEMKYDMFAWDVARFGLWANNREFV KAKVRDQYAHRFSIHFPNEERSAGRPLRTRPVYQMQKDMGAVFGLNYGWEHPLWFSDA PGTTDTNGFTRQNWWGPVGEECKMLRARAGIIDISNFAKYRVKGPGAEEWLNAVFANR MPKAVGRSCLTPLIGVRGGIAGDATVTRLAEDEFWVISSGMAERYHKRFFDAVPLPEG TTFESLTDTVCGFNVAGPKSREMLQRLTNASLATEDFPFMRSARIELAGVDCVAIRVS FTGDLGWELHCPAEDQAQLYAALLAAGREIGAGPVGSRALMSLRIEKGYGSWSREYSP EYWPQEAGLAALCKMDKDFLNKPALEAVIGQEPRERLVILHLEEADVSASNADATGGE PIFKDGLGVGRVSSGAYGYSVGMSLALGYVKGGAMPGDAVEVMVLGRPHRAHILHAAP FDPEGARLRS" gene complement(1737865..1738233) /locus_tag="RTM1035_08459" CDS complement(1737865..1738233) /locus_tag="RTM1035_08459" /note="COG0516 IMP dehydrogenase/GMP reductase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08459" /translation="MAQDFYEFDQSAVDAALDVARRRHEGHTAAKNLTAQSALPAGGG HVAVAAQCISVSVSNHQVCINLPLGLGKHCLPLPVSIPDGTAAEACLDICTKFGIPTG VKVSVKVAGSTVISETFGIC" gene 1738487..1740895 /locus_tag="RTM1035_08464" CDS 1738487..1740895 /locus_tag="RTM1035_08464" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="aminomethyl transferase family protein" /protein_id="jcventer:1101493006649_RTM1035_08464" /db_xref="CDD:30753" /translation="MKTSTRVVVIGGGVVGCSVLYHLTKLGWSDVMLLERSELTSGST WHAAGGFHTLNGDTNMAALQGYTIRLYKELEEITGMSCGLHHVGGVTLADNRDRFDML LAERAKHRYMGLDTHIVTPEEIAKIAPVTNIEGIIGGLYDPLDGHLDPSGTTHAYAKA ARMGGASIETHCMVRETKQRADGTWDVVTDKGTIHTEHVVNAGGLWAREVGAMAGVYL PLHPMEHQYIVTDEIPDIYNRETEHPHVMDPAGESYLRQEGRGLCIGFYEQPCRPWAV DGTPWDFGHELLPDNLDKIEASIEFAYRRFPVLEDAGVKSVIHGPFTFAPDGNPLVGP IPGLRGYWSACGVMAGFSQGGGVGLMLAQWMIHGECERDVTAMDVARFGDWITPGYTR PKVIENYQKRFSVSYPNEELPAARPFRQTPMYEVFDGMGAVWGAQYGLEVVNYFAKAD EPRYETPSFRRSNAWDATAREVKAVREAVGINEVHNFGKYLVTGPNARDWLDRIMAGR IPKPGRLSLTPMLSPKGRLWGDFTVSCLNDTTFQLTASYGAQAVHMRWFAQNEATGVR VENISDRLNGFQIAGPKAREVLMACTRDPLGEMRFMDVRRATVGMVDCLVQRVSYTGD LGYEIFCDPMAQRALWDVLWSSGQKHGMQPFGMRAMMSLRLDRFFGSWLNEFSPDYTP GETGMDRFISFTKNTDFFGRAAAEAERATGAARKLVAFEVEALDADVNGYEPVWIDGE VRGFCTSGGYSHHAGKSIALALIPADLAEAGLQAEIEILGHKRAAKMLTEALFDVDGA RMRG" gene complement(1740968..1741192) /locus_tag="RTM1035_08469" CDS complement(1740968..1741192) /locus_tag="RTM1035_08469" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08469" /translation="MPLSYKARKRWSLVVLLVGLPAYVVAAVTLVNWMDRPSIWVELL IYVGLGFLWIVPLKRVFLGVGQPDPDASKD" gene complement(1741202..1742497) /locus_tag="RTM1035_08474" CDS complement(1741202..1742497) /locus_tag="RTM1035_08474" /EC_number="6.3.4.4" /note="COG0104 Adenylosuccinate synthase" /codon_start=1 /transl_table=11 /product="adenylosuccinate synthetase" /protein_id="jcventer:1101493006649_RTM1035_08474" /db_xref="CDD:48372" /translation="MANVVVVGAQWGDEGKGKIVDWLSERADVIARFQGGHNAGHTLV IDGKVYKLNALPSGVVRGGKLSVIGNGVVLDPWHLVKEIASIREQGVTITPETLMIAE NTPLILPIHGELDRAREEAASKGTKIGTTGRGIGPAYEDKVGRRSVRVADLADEATLI ARVDRALQHHDPLRRGLGIAPVDREALIAQLKDIAAQILPYAAPVWKVLNEQRRAGKR ILFEGAQGALLDIDFGTYPFVTSSNVIAGQAATGVGLGPGAIDYVLGIVKAYTTRVGE GPFPTELHDADGQRLGERGHEFGTVTGRKRRCGWFDACLVRQTCVTSGVTGIALTKLD VLDGFETLKICVGYDLDGTRLDYLPTAADQQARCTPIYEELPGWSQSTEGARSWADLP AEAIKYVRRVEELIDCPVALLSTSPEREDTILVTDPFAD" gene 1742701..1743063 /locus_tag="RTM1035_08479" CDS 1742701..1743063 /locus_tag="RTM1035_08479" /codon_start=1 /transl_table=11 /product="preprotein translocase, SecG subunit" /protein_id="jcventer:1101493006649_RTM1035_08479" /translation="MENVVLTVHLLLALALIGVVLLQRSEGGGLGMGGGGGGAMTGRA AATALGKMTWILAAAFIVTSITLTIIAAQNAAGVSVLDRLTDQPPAAETTTPALPDVD ALMPPPAGDTAPLTPTAD" gene 1743233..1744876 /locus_tag="RTM1035_08484" CDS 1743233..1744876 /locus_tag="RTM1035_08484" /EC_number="6.3.4.2" /note="COG0504 CTP synthase (UTP-ammonia lyase)" /codon_start=1 /transl_table=11 /product="CTP synthetase" /protein_id="jcventer:1101493006649_RTM1035_08484" /db_xref="CDD:30850" /translation="MARYIFITGGVVSSLGKGLASAALGALLQARGFSVRLRKLDPYL NVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTGVPARISDSVSSGRIYSNVLEKE RRGDYLGKTIQVVPHVTNEIKDFLSIGEDEVDFMLCEIGGTVGDIEGLPFFEAIRQFS HDRPRGQCIFMHLTLLPYLAASGELKTKPTQHSVKELQSIGIAPDILVCRSEQPIPDK EREKIALFCNVRKEHVVAAYDLKSIYEAPLAYHREGLDQAVLDVFQISPAPKPDLTVW LDVVDRIQNTDGAVNIAIVGKYVQLEDAYKSIKEALIHGGMANRVKVNVEWVDAEIFE REDPAAHLEGFHAILVPGGFGERGTEGKIKAAEFARTRKIPYLGICLGMQMAVIEAAR NVAGMKDAGSEEFDHEAGKRRFEPVVYHLKEWVQGNEKVQRKVSDDKGGTMRLGAYDA VLKDGTRVAAIYGTTAIDERHRHRYEVDTKYREKLEGCGLTFSGMSPDGRLPEIVESS DHPWFIGVQYHPELKSKPFAPHPLFADFVRAALATSRLV" gene complement(1744887..1745972) /locus_tag="RTM1035_08489" CDS complement(1744887..1745972) /locus_tag="RTM1035_08489" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="iron ABC transporter, ATP-binding protein, putative" /protein_id="jcventer:1101493006649_RTM1035_08489" /db_xref="CDD:33633" /translation="MQTPIPRLEIKNLMRRYDGRHVVNNVSLRVMPGHVTCLLGPSGC GKSTTLRMIAGVEMQDSGEIWVDGSLVCDTVYRVPPERRHIGLMFQDFALFPHLSVAR NVGFGLSGDKAAKQRRIEELLDRVGLSRYLNAYPHELSGGEQQRVALARALAPRPGIM LMDEPFSGLDNRLRDGIRDETLEILREQDTAVLLVTHEPEEAMRMADEIALMRDGRIV QQGAPYNVYNAPVDRSAMAFFSEVNVIRGRVRGSLVDTPFGQFLSPGAYEGSEVEIVI RPQHIKIDFDRHGRGPNPTPQDGTPARGVVERARFMGSESLVEFRMDHDGSLLKATVP NVFLPRPGKALWLMIRRDRCFLFPVKG" gene 1746131..1746604 /locus_tag="RTM1035_08494" CDS 1746131..1746604 /locus_tag="RTM1035_08494" /note="COG3184 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08494" /translation="MRILTGALVALCLAIPAHAQDERAARVAIAKDYIDATVTDADIE EFIRRLWQPMIQQIAANGQRLSEEQLAEIDKLFLDHLTQPLTDVMRKQDEVMADLMTL EELTALRDFYTSEHGGAVMRKMPQLAQIQQPMISATLQDAMPDIMPKIEAITTPQ" gene complement(1746614..1747078) /locus_tag="RTM1035_08499" CDS complement(1746614..1747078) /locus_tag="RTM1035_08499" /note="COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases" /codon_start=1 /transl_table=11 /product="beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ" /protein_id="jcventer:1101493006649_RTM1035_08499" /db_xref="CDD:48033" /translation="MTESLKSADIHLIQRIIPHRYPFLLVDKVVDIDGYQSARGIKNV TMNEPHFQGHFPGKPIMPGVTIIEAMAQTAAVMVGTALEMQDRNMLVYFMAIDSAKFR RMVVPGDVLEMKLHTTRGKPGGKVWKFSGIAEVEGELAAEAEFTAMMDLPKA" gene complement(1747153..1747758) /locus_tag="RTM1035_08504" CDS complement(1747153..1747758) /locus_tag="RTM1035_08504" /note="COG3048 D-serine dehydratase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08504" /translation="MRAALARLGLCLGVTLGAAFPLYAQQIGVIQSDVLVIDPERMLL ESEYGKRLQQDIQAERDRLIAYNETIAQELEAEEQRLTALRATTAPNAFRDMADAFDQ RVEELRLESERRSRELERRRELIPIQFMRVVQPVLSDLLTEANAMVMIDARAVLLHSG AADVTDLAVLRINEQIGVGPLVPDATVPSDQTPSQPAPTND" gene complement(1747761..1750097) /locus_tag="RTM1035_08509" CDS complement(1747761..1750097) /locus_tag="RTM1035_08509" /note="COG4775 Outer membrane protein/protective antigen OMA87" /codon_start=1 /transl_table=11 /product="outer membrane protein, OMP85 family" /protein_id="jcventer:1101493006649_RTM1035_08509" /db_xref="CDD:34388" /translation="MNNRDVDRPKGRNLFLAARIGAGGIFALFFVVFLLGTGQRADAQ SYRFSSVAIEGNQRIETGTILSYAGIARNETVSAGQLNDAYQKILGSGLFEDVELVPQ GSNLLIRVVEFPTINQIAFEGNDKIKDEDLAGFIQSKSRQVFSPTQAERDAGVISEAY SQNGRIAARVTPKVIRRSDNRVDLVFEIFEGRKIEVQRIGFVGNKAFSDTRLRRVVES KQTGLLRALIERDTFVEDRVNFDRQVLSDFYNSRGFVDFRVTGTNAELARERDAYFVT FNIQEGQQFRFGEITTVSEINGVEAEIYGDTLKIKPGVVYSPTLVESSIARMERLALK NGVDFMRVEPRITRNDRDLTLDVEFVIQRGPRVFVERIDIEGNTTTLDRVIRRQFDQA EGDPFNPRSIQQAADRIRALGYFEDVDVNAREGSRPDQVVIETDVEETTTGTVSVGAS FSTNSGLGVSLGFSERNFIGRGQQLTAQILATADNINYNLGFVEPAFLGRDVALGLDF SFRETESDNSLFDTAIGTFRPSLTFPTGENTRLNVYYNTSYEDMTDYQGTSGILQNEI AQGGLWTSSVGYNFSFDTRAGGLNPNAGVLLSFGQEFAGLGGDNDFIKTTARLVGQTT VLNEDVTLRAILEGGALNFSGSRDSRFLNRFGSQVIRGFEPNGMGPIEGNELLGGDFF AALKFEAEFPLGLPDEYGITGGAFYDIGSIWGIGNRGSVAPGNTLSSTGFKARHVIGV SLFWSSPFGPIRMNFSKALEKEPGDIEQTFDLTVRTEF" gene complement(1750192..1750383) /locus_tag="RTM1035_08514" CDS complement(1750192..1750383) /locus_tag="RTM1035_08514" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08514" /translation="MLLPNGCVTFVPTLKLSIPGHDMQQIRNGYRGARVLLHVNADFL LYVATLGAALLAAAYIGTL" gene complement(1750433..1751599) /locus_tag="RTM1035_08519" CDS complement(1750433..1751599) /locus_tag="RTM1035_08519" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aminotransferase, class I and II" /protein_id="jcventer:1101493006649_RTM1035_08519" /db_xref="CDD:30785" /translation="MRNSTRSQIDPFIVMDVMEAARRAEAAGRDIVHMEVGQPGTSAP EGARAALARTMATEPMGYTVALGLPALRARIAQLYGDWYNLDLNPERVVITPGSSGAF ILAFTALFDAGDRVGIGAPGYPSYRQILRALDLVPVDIETAAENRLQPVPGDLQGQDL QGLLVASPANPSGTMLDRAALGGLIAAAEGQGAAFISDEIYHGIEYERRAVSALEITD DCYVINSFSKYFSMTGWRIGWMVVPEDHVRVIERLAQNLFICPPHVSQVAALAAMDCS EELEANMAVYRRNRALMLEGLPKAGFDRIAPPDGAFYVYADVSHLTQDSRAFAAEILE HAGVAVTPGLDFDPLRGAGTLRFSYARATADIEEGLTRLRQFMVSRGMARAQDI" gene 1751662..1752984 /locus_tag="RTM1035_08524" CDS 1751662..1752984 /locus_tag="RTM1035_08524" /note="COG4783 Putative Zn-dependent protease, contains TPR repeats" /codon_start=1 /transl_table=11 /product="peptidase, M48 family protein" /protein_id="jcventer:1101493006649_RTM1035_08524" /db_xref="CDD:34394" /translation="MLLLRLALLSLLLSLALPARAVTLLRDPDIEQALRALAAPVLQA AGLSPARVDILVIDDSSMNAFVIDADSIFIHSGLILRMDTPAMLQSVIAHEAAHIANG HLMRRPINARNARTAAALGTALAAVAGAAAGSGEFAVGAAAGLQGAALRSFFSHTRAE ENAADASGMRFLMAAGIDLRGAVQVMELFNGQEALSVNRQDAYARTHPLSRDRFRRIT QLAEAQGRTVAPDPEATYWFARAKSKLSAFQRSPKWTLTRAGEFGYPDIKLMRQAIAY HRQADLRRALAAIDGAVALRPNDPYLHELRGQILMESRQIKPAVAAYARAANLAPNNA LILGSYGRALLADNQTQKAVQFLETARSRDGRDIRILRDLAQANAKLGNNGMASVLTA ERYAIAGRLKDAKIHAERASNLLPRGSAAWQRAQDVLFAAEAEEKRRK" gene 1752981..1753745 /locus_tag="RTM1035_08529" CDS 1752981..1753745 /locus_tag="RTM1035_08529" /note="COG1651 Protein-disulfide isomerase" /codon_start=1 /transl_table=11 /product="27 kDa outer membrane protein, putative" /protein_id="jcventer:1101493006649_RTM1035_08529" /db_xref="CDD:48572" /translation="MILMPRMILSAASLGLCFAFAQPAAALDLESLSDADRTLLRAEI REYLLANPEVIMEAVAVLEQREAKGQAEADSDLVKVNAEALFNDPNSWVGGNLDGDLT LVEFMDYRCSYCRRAHEDVKGLLAADGNIRFIIKEFPILGEESVMASRFAIATRQVAG DEAYASVHDALMAYSGSMSETGFTRLADSLGLDAPAIIAEMNSDAVTQVIAANHALGQ RMQISGTPSFVMGDQMLRGYLPQDAMQRIADEIRAQ" gene 1753748..1754260 /locus_tag="RTM1035_08534" CDS 1753748..1754260 /locus_tag="RTM1035_08534" /EC_number="1.6.5.3" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit N" /protein_id="jcventer:1101493006649_RTM1035_08534" /translation="MLRRSLWAALVLGAAGPAWAQDLPDQSRPLLGAAIRDVLIETHS LLAPLREPIPLTAADLYGDESARDLNLLKRAAPRLFAPDLPGFGPKGATAALAFFTQA DCADCASAEAELRALSDRLGLRINTFDMANDMAFATELGLDMAPSYVLPDMLLRGAMP AIVLEKYLTP" gene complement(1754317..1755750) /locus_tag="RTM1035_08539" CDS complement(1754317..1755750) /locus_tag="RTM1035_08539" /note="COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N)" /codon_start=1 /transl_table=11 /product="Proton-translocating NADH-quinone oxidoreductase, chain N" /protein_id="jcventer:1101493006649_RTM1035_08539" /db_xref="CDD:31211" /translation="MQADLTIILPEIVLSVYAILALLGVAYTGQDRMAGMLVWVTAGL FALLAIWIGASGEGTRTAFGGMFNDDGFARFAKVTILLSAAAVLVLGQDYMQRRGILR FEYPLLVALAVVGMMVMVSAGDLMALYMGLELQSLSLYVVASLRRDSAKSTEAGLKYF VLGALSSGLLLYGASLTYGYAGTTLFSGIIAAAEGQAPVGLLIGLVFVISGLAFKISA VPFHMWTPDVYEGAPTPITAFFATAPKMAAMGLFARVVHDAFGGVVADWQQVLALLAL LSMFLGAFAAIGQTDIKRLMAYSSIAHMGYALMGLAAGTVFGVQAMLIYMAIYVTMNV GTFAFILSMERDGQPVTDIRSLAMYSRAEPGRALAMLILLFSLAGVPPLLGFFGKLYV LRAAYEGGLAWLAIAGVIASVIGAFYYLRIVFYMYFGEEGAGLQTGRSAVQWLFLMGS AAVMLLGIVNMFGIEAMAQAAAATLVN" gene complement(1755768..1757345) /locus_tag="RTM1035_08544" CDS complement(1755768..1757345) /locus_tag="RTM1035_08544" /EC_number="1.6.5.3" /note="COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit M" /protein_id="jcventer:1101493006649_RTM1035_08544" /db_xref="CDD:31212" /translation="MDDDLRGSQLMDNLLSIVTFIPAVAAAILAVFLRGSDEAAQRNA KWVALIATTLTFVVSLFILFDFDASNTGFQFVEEREWLLGLKYKMGVDGISVLFVMLT TFMMPLTIAASWGVTTRVKEYMIAFLLLETLMLGVFMALDLVLFYLFFEAGLIPMFLI IGIWGGKERIYASFKFFLYTFLGSVLMLVAMVAMFSDAGTTDIAALLKHEFESETFSI LGVQVIGGMQTLMFLAFFASFAVKMPMWPVHTWLPDAHVQAPTAGSVVLAAILLKMGG YGFLRFSLPMFPIGSEVLTPLVLWMSAIAIVYTSLVALAQSDMKKLIAYSSVAHMGYV TMGIFAANQQGVDGAIFQMLSHGFISGALFLCVGVIYDRMHTREIDAYGGLVNRMPAY ALIFMFFTMANVGLPGTSGFVGEFLTLVGVFQVNTWVAAVATSGVILSAAYALWLYRR VVMGDLIKESLRTITDMTKRERAIFAPLVVMTLLLGVYPRLVTDITGPSVEALISNVE TAQAMAQTTTQLAETSH" gene complement(1757315..1759399) /locus_tag="RTM1035_08549" CDS complement(1757315..1759399) /locus_tag="RTM1035_08549" /note="COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit L" /protein_id="jcventer:1101493006649_RTM1035_08549" /db_xref="CDD:31213" /translation="METILLFAPLVGALLAGFGWRILGDKGAQWLTTGLLFLSCILSW IVFLGHDGVMHQVHLLDWVQSGTLDTAWAIRMDRLTAIMLIVITTVSALVHLYSMGYM AHDENFRENESYRPRFFAYLSFFTFAMLMLVTSDNLLQMFFGWEGVGVASYLLIGFYF RKPSANAAAIKAFVVNRVGDFGFALGIMAIYFLTDSIKFDDIFAAAPMLAETQLTFLW TEWNAANLIAVLLFIGAMGKSAQLFLHTWLPDAMEGPTPVSALIHAATMVTAGVFLVC RMSPLMEYAPEAMTFVVFLGATTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVAAGL GVYSVAMFHLFTHAFFKAMLFLGAGSVIHGMHHEQDMRNYGGLRKKLPYTFWAMMIGT LAITGVGIPLTHIGFAGFLSKDAVIESAWAGTDGGYAFWMLVIAALFTSFYSWRLMFL TFFGEARGDKHTHEHAHESPMVMLVPLGVLALGAVFAGMIWFNSFFGSHESVNKFFGI PAHHAEASEGHGTEGAADHAEETAEAHAPAIGQGEAPQGAIFMHPDNTVMDDAHHAPK WVKVSPFVAMLTGFLMAVWFYIWDPAMPRRVAETNRPLYLFLLNKWYFDEIFDFLFVR PSKALGHLLWKRGDGDVIDGSINGVAMGIIPWFTRLAGRAQSGYIFTYAFAMVIGIAV LVTWMTIFGGAN" gene complement(1759404..1759709) /locus_tag="RTM1035_08554" CDS complement(1759404..1759709) /locus_tag="RTM1035_08554" /EC_number="1.6.5.3" /note="COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit K" /protein_id="jcventer:1101493006649_RTM1035_08554" /db_xref="CDD:31057" /translation="MIGLEHYLTVAAALFVIGIFGLFLNRKNVIILLMSIELMLLSVN INLVAFSSHLGDMVGQVFTLFVLTVAAAEAAIGLAILVCFFRNRGTIAVEDANVMKG" gene complement(1759714..1759848) /locus_tag="RTM1035_08559" CDS complement(1759714..1759848) /locus_tag="RTM1035_08559" /EC_number="1.6.5.3" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit J" /protein_id="jcventer:1101493006649_RTM1035_08559" /translation="MADLLHHAVSALGLAGLAAIWSVKMVLGFFILRIMKRRRLRVRG " gene complement(1759848..1760456) /locus_tag="RTM1035_08564" CDS complement(1759848..1760456) /locus_tag="RTM1035_08564" /note="COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit J" /protein_id="jcventer:1101493006649_RTM1035_08564" /db_xref="CDD:31181" /translation="MTFAAMAFYLFAVSLLTGGLMTVISRNPVHSVLWLILSFISAAG LFVLLGAEFVAMLLIIVYVGAVAVLFLFVVMMLDVDFAELKAEMAKYMPLALLIGVIL LMQFGLAFGNWEMADGAEAARRAVTPEGVENTAALGLLLYDTYFILFQLSGLILLVAM IGAIVLTLRHRTDVKRQDVLAQMYRDPAKAMELRDVKPGQGL" gene complement(1760453..1760866) /locus_tag="RTM1035_08569" CDS complement(1760453..1760866) /locus_tag="RTM1035_08569" /note="COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit" /codon_start=1 /transl_table=11 /product="Carboxymuconolactone decarboxylase" /protein_id="jcventer:1101493006649_RTM1035_08569" /db_xref="CDD:42593" /translation="MSDPSNPFEMMMRQAQEMAKALNPALESFSPKGFETLWPTMPKD FMEMSFGKGLNKEGLDAKTRLLLTLAGLTMLGAQSDTQIRMTVRHALEAGATRDEIAE TIAQMAMFAGIPSMTRAMDFAREVMDQGDKEGKDK" gene complement(1760863..1761357) /locus_tag="RTM1035_08574" CDS complement(1760863..1761357) /locus_tag="RTM1035_08574" /EC_number="1.6.5.3" /note="COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit I" /protein_id="jcventer:1101493006649_RTM1035_08574" /db_xref="CDD:31338" /translation="MTKIDYGRAAGYFLLSDFFKGFKLGLKYFFAPKATLNYPHEKGP LSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIDAEPRDDGSRRTTRYDIDMT KCIYCGFCQEACPVDAIVEGPNFEFATETREELFYDKARLLANGDRWEAEIARNLEMD APYR" gene complement(1761361..1762398) /locus_tag="RTM1035_08579" CDS complement(1761361..1762398) /locus_tag="RTM1035_08579" /EC_number="1.6.5.3" /note="COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit H" /protein_id="jcventer:1101493006649_RTM1035_08579" /db_xref="CDD:31209" /translation="MAEFFTTPLGTFVIILAQCLAVVGFVMVSLLFLVYGDRKIWAAV QMRRGPNVVGTWGLLQTVADALKYVVKEVVVPAGADKAVFMLAPMTSFVLAVLAWAVI PMNEGWVLSDINVAVLFVFAVSSLEVYGVIMGGWASNSKYPFLGSLRSAAQMISYEVS LGLIIIGVIISTGSLNFSAIVGAQDTAYGFFGWYWLPHLPMVFLFFISALAETNRPPF DLPEAESELVAGYQVEYSSTPFLLFMAGEYIAIFLMCALMSLLFFGGWLSPIPGLPDG VLWMIGKMAFFFFLFAMVKAITPRYRYDQLMRIGWKVFLPMSLGWVVIVAFLAKFEVL GGFWARWAIGG" gene complement(1762406..1762789) /locus_tag="RTM1035_08584" CDS complement(1762406..1762789) /locus_tag="RTM1035_08584" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="jcventer:1101493006649_RTM1035_08584" /translation="MVMALISPVALGLAGCAESASPVPFAPDYQGIETRLLDGDLVNF HVSMRGARDPLDVERYAECAAAQYALIRGYGFARHLRTSVSEEAGIWQGDAVYTISAA LPRGLLTIDAEVVAANCAENGIPMV" gene complement(1762792..1764780) /locus_tag="RTM1035_08589" CDS complement(1762792..1764780) /locus_tag="RTM1035_08589" /EC_number="1.6.5.3" /note="COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit G" /protein_id="jcventer:1101493006649_RTM1035_08589" /db_xref="CDD:31237" /translation="MADLRKIIIDDQEIEVEGAMTLIQACEQAGVEVPRFCYHERLSI AGNCRMCLVEVVGGPPKPAASCAMQVKDLRPGPDGTPPVVKTNSPMVKKAREGVMEFL LINHPLDCPICDQGGECDLQDQAMAYGVDFSRYREPKRASEDLDLGPLVETHMTRCIS CTRCVRFTSEVAGIMQMGQTGRGEDAEITSYLGQTLDSNLQGNIIDLCPVGALVSKPY AFTARPWELTKTETIDVMDALGSNIRVDCKGREVMRILPRNHDGVNEEWISDKTRFVW DGLRRQRLDRPYIRENGKLRVATWAEALAKVAGAIKGAKKLAGLVGDLVPVEAAFALK ALIEGQGGHVECRTDSARLPAGNRSGYVGNVRIEDLDTAKNVVLIGTDPRVEAPVLNA RLRKAWIKGANITLVGPKVDLTYDYTHAGTDRAALGGLSVPEDTIVIVGMGALREADG AAVLAAAMALSGRMLVLHTAAGRVGAMDVGAVTEGGLEAAIDGADVIYNLGADEVDIA AGPFVIYQGSHGDRGAHRADVILPGAAYTEEQGLFVNTEGRPQLALRAGFAPGDAKEN WAILRALSGELGAVLPYDSIAQLRQALVKAVPHLKKVDQVPANDWQPLETAALGKADF RLAIADFYLTNPIARASELMAELSANAKARGTQPMAAE" gene complement(1764787..1765191) /locus_tag="RTM1035_08594" CDS complement(1764787..1765191) /locus_tag="RTM1035_08594" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08594" /translation="MILSFVLSLGLGVSSGVAAVRAESLAQEADINQGLFYMAVADEI RKRCGDISPRVMTAISYMRALKAEAQSRGYTEAEIDAYISDKAEKRKIRGRSDDYIRS MGAMPNDGPSLCDLGRAEIAKQSPIGKFLKAK" gene complement(1765322..1765675) /locus_tag="RTM1035_08599" CDS complement(1765322..1765675) /locus_tag="RTM1035_08599" /note="COG4992 Ornithine/acetylornithine aminotransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08599" /translation="MSVLQKYRRGGLFVIALAMLVGCAQREERVLFNGNYYPGKARAE KEDRRNFTAFVRRAGRGVEGAQQAALYEATRYCLDNFGTSEIEWVGVPAGAEGPVYAR SGDTVSVRGRCIIWS" gene complement(1765672..1766967) /locus_tag="RTM1035_08604" CDS complement(1765672..1766967) /locus_tag="RTM1035_08604" /note="COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase, F subunit" /protein_id="jcventer:1101493006649_RTM1035_08604" /db_xref="CDD:32078" /translation="MLKDQDRIFTNLYGMHDRSLKGALARGHWDGTAKILQNGRDWIV NQMKASGLRGRGGAGFPTGLKWSFMPKESDGRPSYLVVNADESEPGTCKDREIMRHDP HTLIEGCLIASFAMNAHACYIYIRGEYIREKEALQTAIDEAYAAGLVGKNACKSGWDF DIYLHHGAGAYICGEETALLESLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVV PTILRRGPEWFSGFGRPNNSGTKLFAISGHVNNPCVVEEAMSITFEELIEKHCGGIRG GWDNLKAVIPGGSSVPCIRGEFMREAIMDFDYLREQRSGLGTAAVIVMDKSTDMIKAI WRLSKFYKHESCGQCTPCREGTGWMMRVMDRLVRGEAEVEEIDMLLDVTKQVEGHTIC ALGDAAAWPIQGLIRNFRDEIEDRIKAKRTGRVSAVAAE" gene complement(1766972..1767211) /locus_tag="RTM1035_08609" CDS complement(1766972..1767211) /locus_tag="RTM1035_08609" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08609" /translation="MMQAMRGQDRDRQMARKGRTVGVVIAATMLIWMAAQWLGAQMGW PIRFVFLFDLAAIAAFIWALVVTYQIWRLRRDNQG" gene complement(1767208..1767885) /locus_tag="RTM1035_08614" CDS complement(1767208..1767885) /locus_tag="RTM1035_08614" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08614" /db_xref="CDD:33538" /translation="MSDTSKLSTCQIISWGLALLSGVLVIWSTSGAVGFFAALLLGLA FAVFFGLVITGLVCTGYNAGDRGIEVRDVEATLRDMTGITGYKAPDVEEEAPAPAASP VASPAQSASVSVAAAPVEVEAEADAEGTKPAALAAPRDGAADDLKQIKGVGPKLEVLC HELGFYHFDQIAGWSAAEVAWVDQNLKGFKGRVSRDNWVEQAKILAAGGETEFSNRVA HGGVYEE" gene complement(1767921..1769111) /locus_tag="RTM1035_08619" CDS complement(1767921..1769111) /locus_tag="RTM1035_08619" /EC_number="1.6.5.3" /note="COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit E" /protein_id="jcventer:1101493006649_RTM1035_08619" /db_xref="CDD:41314" /translation="MLRRLYHQQPESFAFSPANQAWAEGQISKYPEGRQASAIIPLLW RAQEQEGWLSRPAIEHVADMLAMDYIRALEVATFYFMFQLQPVGSVAHFQICGTTTCM ICGAEDLIAVCKDKIAPKAFDLSADGKFSWEEVECLGACANAPMAQIGKDYYEDLTAA RFAEIIDELAAGKVPVPGPQNGRYAAEPKSGLTSLKDFDSGRAQYNASVQAAVDIGDT VKRIDGTEVPLLTPWRDKGAMHKPAPSAVKQNAEPVAIVTKVSPATPADATGATKAEA QATPTAKPAVEPAAKPVKAGAEPTPGKKPKVLSAPRKSGADDLKMIKGVGPKLEQLLH SMGFYHFDQIAKWTEEEISWVDQNLEGFKGRVSRDNWVEQARLLADGKETEFSARAKK GGVY" gene complement(1769114..1769395) /locus_tag="RTM1035_08624" CDS complement(1769114..1769395) /locus_tag="RTM1035_08624" /EC_number="1.6.5.3" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit D" /protein_id="jcventer:1101493006649_RTM1035_08624" /translation="MIMVRLAALAAFGVLAGCALPPEGVGAEGIARYDAAAKSLGCRL VTEPDYLAAEIQTGLERQQLLDITAYKLSSGGAVRLPDGGVKLTTGACA" gene complement(1769392..1769625) /locus_tag="RTM1035_08629" CDS complement(1769392..1769625) /locus_tag="RTM1035_08629" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08629" /translation="MSGFDTLTVCAPVADFAGARGARAGQLSPSQPSKRVPEAGLVDT GLHLVIGRIFQEGEVVTNTNDTFVSISQEVCAL" gene complement(1769622..1769984) /locus_tag="RTM1035_08634" CDS complement(1769622..1769984) /locus_tag="RTM1035_08634" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08634" /translation="MSWASLAIALSGAGVLVTGALAALFLRDPVAGMVATSHRAEQLP QVMANRYVAMLVLAVGATVYGDLKVIALLFAAFAYMAFHDSWIYARAGQAVSKHIGAG IAALIVFGVTVLAIGQGS" gene complement(1769984..1771204) /locus_tag="RTM1035_08639" CDS complement(1769984..1771204) /locus_tag="RTM1035_08639" /note="COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase delta subunit" /protein_id="jcventer:1101493006649_RTM1035_08639" /db_xref="CDD:30994" /translation="MDGSKGFDDALTGEQKIRNFNINFGPQHPAAHGVLRLVLELDGE LVERCDPHIGLLHRGTEKLMESRTYLQNLPYFDRLDYVAPMNQEHAWCLAIEKLTGVE VPRRASLIRVLYCEIGRVLNHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERACGA RLHAAYFRPGGVHQDLPPALIDDIETWANEFPRVLDDIDGLLTENRIFKQRNADIGII SQQEALDWGFSGVMVRGSGMAWDLRRAQPYECYDEFDFLIPVGKNGDCYDRYLCRMEE MRQSLRIIHQAIAKLRAPEGQGDILARGKITPPARAEMKRSMEALIHHFKLYTEGFRV PEGEVYAAVEAPKGEFGVYLVADGTNRPYRAKLRAPGFLHLQAMDHVAKGHQLADVAA IIGTMDVVFGEIDR" gene complement(1771204..1771806) /locus_tag="RTM1035_08644" CDS complement(1771204..1771806) /locus_tag="RTM1035_08644" /EC_number="1.6.5.3" /note="COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit C" /protein_id="jcventer:1101493006649_RTM1035_08644" /db_xref="CDD:40424" /translation="MSATLKELGGYIEHKRGDCVLGWDVAFGELTVDVALNHIDGLAE FLKTDQNCAFSTLVDITAVDYPDRAKRFDVVYHFLSMYQNHRIRLRVAVRDEDMVPSI TEAYPAANWFEREVFDMFGILFSGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDE VQKRVVYEPVSLVQEYRQFDFMSPWEGAEYILPGDEKGAK" gene complement(1771803..1772336) /locus_tag="RTM1035_08649" CDS complement(1771803..1772336) /locus_tag="RTM1035_08649" /EC_number="1.6.5.3" /note="COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit B" /protein_id="jcventer:1101493006649_RTM1035_08649" /db_xref="CDD:30726" /translation="MAVMTGAHTAGPDREVATQALNAELQDKGFLLTSTEDIINWART GSLHWMTFGLACCAVEMMHTAMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPAL RKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVY GILQLQRKIRRTGTIVR" gene complement(1772327..1772683) /locus_tag="RTM1035_08654" CDS complement(1772327..1772683) /locus_tag="RTM1035_08654" /EC_number="1.6.5.3" /note="COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit A" /protein_id="jcventer:1101493006649_RTM1035_08654" /db_xref="CDD:31180" /translation="MLREYLPILVFLAVAIGLGLVLILAAVVLAVRNPDPEKVSAYEC GFNAFDDARMKFDVRFYLVSILFIIFDLEIALLFPWAVAFQDLSMTAFWSMMVFLAVL TAGFAYEWRKGAMEWQ" gene complement(1772913..1773701) /locus_tag="RTM1035_08659" CDS complement(1772913..1773701) /locus_tag="RTM1035_08659" /EC_number="4.2.1.17" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /protein_id="jcventer:1101493006649_RTM1035_08659" /db_xref="CDD:31227" /translation="MAMSETISIERDARGVATLTLAREDKHNALSAQMIAELHEAAEA LGADDGVRVVVLAARGKTFCAGGDLGWMRDQFDAEPVQRGREAAKLAQMLRALDSMPK PLIGRVQGNAFGGGIGLMSVCDVAIGADHALMALTETRLGLIPATIGPYVVARMGAAR ARRVFMSGRRFDAAEAVQLGLLARAVPEADLEAAVEAEVAPYLDCAPGAVGQAKALVR ALGPRIDEDTIAMTISALTDCWEGAEAREGIGAFFERRKPHWQG" gene complement(1773709..1774578) /locus_tag="RTM1035_08664" CDS complement(1773709..1774578) /locus_tag="RTM1035_08664" /EC_number="4.1.3.4" /note="COG0119 Isopropylmalate/homocitrate/citramalate synthases" /codon_start=1 /transl_table=11 /product="hydroxymethylglutaryl-CoA lyase" /protein_id="jcventer:1101493006649_RTM1035_08664" /db_xref="CDD:30468" /translation="MMGARVEIFEVGPRDGLQNEARHIPTRDKIALVDCLSDAGFARI EVASFVSPKWVPQMADSGEVLRGIRRAPGVRYAALAPNMRGLHDALEAGADEVAIFGS ASEGFSRANINATIDESLARFAPVMAAAGAEGLRVRGYVSCVVECPYDGPVAPSEVAR VAEALWAMGCYEISLGDTIGRGSPEAVAAMLAAVAEVVPVERLAGHFHDTSGRALENI EVALAQGVRVFDAAVGGLGGCPYAPGAAGNVATEAVHARLAALGYETGLDAGVLARAA DMARAMRGAGQGS" gene complement(1774575..1775234) /locus_tag="RTM1035_08669" CDS complement(1774575..1775234) /locus_tag="RTM1035_08669" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase-like protein" /protein_id="jcventer:1101493006649_RTM1035_08669" /db_xref="CDD:48595" /translation="MIRLHHVPLARSLRVMWLLEELGLDYQVAYYSIRDGSMRSAEFL ALSPAGRVPVLEHQGAVWFESGAIVQLLCETYPEAGLMPALGSAERARCLEIFGYAET VGCLLENLNLNQVFLRPPAQPAPVVVKLLNARLRASLAAMEARMEGEYLLPSGFSAAD VMFAYGFELARYYVDLDAYPRLMAYWARLRARPAYVRAKARDGVQDLYTQEFYPVPEG A" gene complement(1775231..1777171) /locus_tag="RTM1035_08674" CDS complement(1775231..1777171) /locus_tag="RTM1035_08674" /note="COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit" /codon_start=1 /transl_table=11 /product="methylcrotonyl-CoA carboxylase, alpha subunit" /protein_id="jcventer:1101493006649_RTM1035_08674" /db_xref="CDD:34383" /translation="MFERILIANRGEIACRIMRTARAMGVEVVAVYSDADRDAAHVAL ADRAVWIGGAAPAESYLRGEALIAAALEAGAEAIHPGYGFLSENPDFVEAVAAAGLVF IGPSARAIRAMGLKDAAKVLMEQAGVPVVPGYHGANQDPEHLAGAAEAIGYPVLIKAV AGGGGKGMRLVEQPEHFADALESAQGEARTAFGNAAVLIEKYIQKPRHIEVQVFGDGS RAVHLFERDCSLQRRHQKVIEEAPAPGMTEAMRAAMGQAAVRAAEAIGYSGAGTVEFI VDGSDGLRADRFWFMEMNTRLQVEHPVTEAITGVDLVEWQLRVAAGEGLPAQQEELTI NGHAFEARLYAEDVPKGFLPATGRLTHLKFPALARADSGVRAGDEISPWYDPMIAKVI THGPTRAVALRRLSAALEGTEVAGTVTNLGFLGALARHAGFAGGQVDTRLIARDIETL VVVPEAGPQHLALAALAGLGLLEGAPSDAGFVLWAPLEREVRLIHGGAEIVVRVATQG AAAHDLQVADVRVEARHVGGSWRLDGQPAPAVAVDGHRITVFARYGLVFDLVDPLARE GAAGGDATLIEAPMPGLVKAVYATPGQAVVKGDRLAVLEAMKMEHSLLAARDGVVAEV LVAPGDQVSAGAALVRLEEEAA" gene complement(1777184..1778008) /locus_tag="RTM1035_08679" CDS complement(1777184..1778008) /locus_tag="RTM1035_08679" /note="COG1070 Sugar (pentulose and hexulose) kinases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08679" /translation="MVCNQEITLRTQQECDEVYLRPGYKRFCVNLSDEIVLKSFAKGI TFISRGALGNLHRVALEIALGGPTKVFAKQSRYDLSIFLNEWRSETIYRSFFDSSKGG VFNEELQASGLKEVFQKAVSYQERQSDKGENFRFAVKAFIDARSACASYTIQMLAALQ FLEWLDGETTMKPHKMAEKFGIPPKAAKAILILRNEFFHNPKQKASNVNLLLSVEKAG EAFEACGIDIQGLGGGSRNSAVLNYVVSLAGYLLMREIGADVVPTFFIPGHGEYTP" gene complement(1778397..1780001) /locus_tag="RTM1035_08684" CDS complement(1778397..1780001) /locus_tag="RTM1035_08684" /note="COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)" /codon_start=1 /transl_table=11 /product="methylcrotonyl-CoA carboxylase, beta subunit" /protein_id="jcventer:1101493006649_RTM1035_08684" /db_xref="CDD:34408" /translation="MRLTSSVLTGSEAFKANRAGHLEALRVVREAAEWAAAGGGAQAR ERHVSRGKMLPRDRVAGLLDPGSPFLEVGATAAHGLYEGAAPCAGVIAGVGRVMGREV MVVCNDATVKGGTYYPMTVKKHLRAQEIAEECHLPCVYLVDSGGANLPNQDEVFPDRD HFGRIFYNQARMSAKGIAQIAVVMGSCTAGGAYVPAMSDVTIIVRDQGTIFLAGPPLV KAATGEVVTAEDLGGGDVHTRLSGVADYLAEDDGHALALARQAVGSLGKANAPTLRWE ASEPPAYDPEDLLGVVPADLRTPYDIREVIARVVDGSRLDEFKARFGETLVTGFAHIK GCPVGIIANNGVLFSEAAQKGAHFVELCSQRRIPLIFLQNITGFMVGRKYENEGIARH GAKMVTAVATTSVPKITMVVGGSFGAGNYGMAGRAYQPRFMWSWPNSRISVMGGEQAA GVLATVKRDAIERKGGTWSAEDEAEFKRPTVEMFERQAHPLYASARLWDDGIVDPRKS RDVLALSLRAALNAPVEETRFGVFRM" gene 1780139..1780750 /locus_tag="RTM1035_08689" CDS 1780139..1780750 /locus_tag="RTM1035_08689" /note="COG3047 Outer membrane protein W" /codon_start=1 /transl_table=11 /product="OmpW family outer membrane protein" /protein_id="jcventer:1101493006649_RTM1035_08689" /db_xref="CDD:32861" /translation="MKHFTALTLSALLASAAVPAFAQEKGDFLLGLGLGWIEPDSATT TAVGRVSADGALSPTITVEYFIAKNVGIELLASLPFEHDVDLAGAGQVGEVKHLPPTL SLQYHFTNSSAFTPFVGVGVNYTYFFDEKGKGPLAGVSLDLDDSWGLALHAGADYAIS EKSAVRLDVRYIDIETDVKVGGAQIGKVKIDPWVFNVAYVMKF" gene complement(1780822..1782399) /locus_tag="RTM1035_08694" CDS complement(1780822..1782399) /locus_tag="RTM1035_08694" /note="COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases" /codon_start=1 /transl_table=11 /product="AMP-dependent synthetase and ligase" /protein_id="jcventer:1101493006649_RTM1035_08694" /db_xref="CDD:30714" /translation="MNGMRPLLRSAPYAQLCDGFRWSIPARLNMAAQVCDSWAEAEPA RVAIIDLSGEGPRDVTYGALRIMADGLAHILVARGVQRGDRVGVLRSQGGWCAVAHIA IWKIGAISIPLFKLFKEDALVSRVGDAGAKVVVTDVEGAAMLRALPGVTPLIPEHRAL PEGRFATVDTGAEEPAVLIYTSGTTGSPKGALHAHRVLTGHLPGVEMSHDFLGQPGDC LWTPADWAWIGGLFDVLMPGLAIGVPVVAARMAKFSPEDCARIISQGSVKNVFFPPTA LRMLRAAEARIAGLRSVASGGEPLGAEMLEWGRRAFGVTINEFYGQTECNMVGTSCAA LFPAVPGSLGHAVPGHDVAVIDANGCVTEGEGEIAVRRGSASMMLEYWQRPRETAEKF RGDWLLTGDRGVIEGGHIRFVGREDDVITSAGYRIGPAEIEDCLLTHPAVATVGVVGK PCALRTEIVKAYVVLKPGHAPSEALTRALQDHVKGRLAGYSYPREIVFLDALPMTVTG KVIRKDLKARAVAEGQT" gene complement(1782396..1782686) /locus_tag="RTM1035_08699" CDS complement(1782396..1782686) /locus_tag="RTM1035_08699" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08699" /translation="MPRRLFFVPVLALIAAVAGIGLLLGGRAVLTTETAVIERVAARY LEEAGQGALRSDCAARPATSADLWLVVVCGRYEYFVDAYGRVAHVNVAEVTS" gene complement(1782691..1783167) /locus_tag="RTM1035_08704" CDS complement(1782691..1783167) /locus_tag="RTM1035_08704" /note="COG3755 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08704" /db_xref="CDD:46891" /translation="MRAIIFAALMLPVPAMAQDLIFDIAPVAACLQSGGGEECAGIAA EACINATPGGYSTVGMGACTEYERAAWDGWLNEVYQALSTKFKAQDAEAPPYAPKQAD ALREMQRAWIGFRDAKCSYVASQWGGGTGAGPASVSCHLHETARQMLYLQSSQLGE" gene complement(1783164..1784327) /locus_tag="RTM1035_08709" CDS complement(1783164..1784327) /locus_tag="RTM1035_08709" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="isovaleryl-CoA dehydrogenase" /protein_id="jcventer:1101493006649_RTM1035_08709" /db_xref="CDD:29656" /translation="MFNAVMQFDLGEDVNALREMVHRWAQERVKPMAAEVDRSNAFPN ALWQEMGDLGLLGITVPEEYGGAGMSYLAHVIAVEEIARASASVSLSYGAHSNLCVNQ IKLNGTEAQKRKYLPGLVSGAHVGALAMSEAGAGSDVVSMKLRAEKRNDRYVLNGTKY WITNGPDADTLVVYAKTDPEAGSKGITAFLIEKTMTGFSTSPHFDKLGMRGSNTAELI FDDVEVPFENVLGEEGRGVRVLMSGLDYERVVLAGIGTGIMAACLDEIMPYLAERKQF GQPIGNFQLMQGKIADMYTAMNSARAYVYEVAKACDRGDVTRQDAAACCLYASEQAMV QAHQAVQAMGGAGFLADAPVARLFRDAKLMEIGAGTSEIRRMLVGRELMGAMA" gene 1784534..1785340 /locus_tag="RTM1035_08714" CDS 1784534..1785340 /locus_tag="RTM1035_08714" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006649_RTM1035_08714" /db_xref="CDD:47669" /translation="MPHAEIKTVAQWARGTDWHLTLQHTCPDHALIWITRGQGIAIVD GVRRGIGVHNALAIPAGSMFSLDLGKTGFGLVCILPAGGPILMPDHAQHLRIRDVTSQ NELTAILEAMQREQSARREFMDEALNAQARMLTVWLRRAMIAQGPQERPNSSTRLMQA YAALVARDFTSGRAMAVYARALGVTPTHLTRVCKQASGLTAADLLTERSLHAARDMLE AGELPIGQIAASLGFGSAAYFSRFILQHTGVTPSALRQAATTRKPMAAAH" gene 1785506..1787095 /locus_tag="RTM1035_08719" CDS 1785506..1787095 /locus_tag="RTM1035_08719" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein" /protein_id="jcventer:1101493006649_RTM1035_08719" /db_xref="CDD:31090" /translation="MQRREFLTRATALGLSAGAAYALGGLSQPLHAKPAIAQGGTLRI QQNVKPLSDPRSYDWSELGNQTRGFLEYLVEYQSDGTFTGMLLDNWQVNEDATRYLLH LRANVTWNNGDPFTARDVARNIARWCDTTAERNSMAGRFAGLIDPDTGQARKDAITVL DDLTLVLSLSQPDISVIANMADYPAALVHESYDGGDPFLNGIGTGPFRPVSLIPGERC ILERHPEHRWWGTEVFGGPYLDRVEFVDLGLNPSAWLGAAERGEIDLLYETVGDFIDA MDGIGWASTRTETAATTVIRASQSARMVGTNPYLNRDIRRAMALAVDNEICLELGYGG RGTVAANHHVSPIHPAYADIGPAPYDPAQARATIEAAGLLGFEHELVTVDDEWQRNTG DAVAAQLRDAGLTVRRRILPGPEFWSNWREFPFSATQWNHRPLDVQVLSLAYRSNAAW NESGFADEKFDALLDEANRLSDADRRRTVMEQLQTILRDEGVIIQPYWRALFNHHNGQ VVNAEKHPANEIHLYRIGFAA" gene complement(1787108..1787698) /locus_tag="RTM1035_08724" CDS complement(1787108..1787698) /locus_tag="RTM1035_08724" /note="COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /codon_start=1 /transl_table=11 /product="Lytic transglycosylase, catalytic" /protein_id="jcventer:1101493006649_RTM1035_08724" /db_xref="CDD:29556" /translation="MRWIASALVAFGLIVPGVSEADVLSSKSRVSLFKSQTKVLDNRA RQQYNNSVRLQPERVKTPTMWDDLSPAFRGAYRGPYLDLAKQAARRYQVPEDLFLRLV QQESGWRADARSHKGAIGLAQLMPDTARILGVNPHDPRENLEGGARYLAEQYRTFGSW RLALAAYNAGPGAVSKYGGVPPFKETRNYVKVILGS" gene 1787891..1788406 /locus_tag="RTM1035_08729" CDS 1787891..1788406 /locus_tag="RTM1035_08729" /note="COG0629 Single-stranded DNA-binding protein" /codon_start=1 /transl_table=11 /product="single-strand binding protein" /protein_id="jcventer:1101493006649_RTM1035_08729" /db_xref="CDD:30974" /translation="MSGSVNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRN SGERRERTEWHTVAIFSEGLVRVAEQYLRKGSKVYLEGKLQTRKWQDQSGQDKYSTEI VLQGFDATLVMLDGRGEGGASGGGGGSYGGGQDQGYGGDYGGDYGSSPAPASSDGGSR PARDMDDEIPF" gene 1788712..1790532 /locus_tag="RTM1035_08734" CDS 1788712..1790532 /locus_tag="RTM1035_08734" /note="COG1217 Predicted membrane GTPase involved in stress response" /codon_start=1 /transl_table=11 /product="GTP-binding protein TypA" /protein_id="jcventer:1101493006649_RTM1035_08734" /db_xref="CDD:31410" /translation="MDLRNIAIIAHVDHGKTTLVDQLLKQSGAFRANQAVDERAMDSN DLERERGITIFAKPTSVLYKKTRINIVDTPGHADFGGEVERILSMVDGVVLLVDAAEG PMPQTKFVTSKALRLGLRPIVVLNKVDKPDAEPDRALNECFDLFASLDANDDQLDFPH MYASGRAGWADHDLEGPRKDLSALFDLIVNHVPAPKQLAHIDEDFRMLATTLGADPFV GRLLTGRVESGRLKVGQTVQALSRIGQKIEQFRVTRIQAFRGLSSQDIDEATAGDIVS LAGMSKATVADTICALAVEEPIEAQPIDPPTITVTFGINDSPLAGREGKKVQSRVIRE RLMKEAESNVAIKVTDTPGGDAFEVAGRGELQMGVLIENMRREGFELSISRPQVLMRE GDKGERLEPIEEVTIDVDDEYTGAVIEKITGPRRGDLVEMKPSGAGKTRIIAHVPSRG LIGYHGEFLTDTRGTGVLNRVFNSWAPHRGPIPGRRAGVLISMENGEAVAYALWNLEE RGRMFLGAQAKVYTGMIIGEHSRDNDLEVNPLKGKKLTNVRASGTDEAVRLTTPITMS LEEAIAYIDDDELVEVTPQSIRLRKRYLDPHERKRMSKKD" gene complement(1790569..1791114) /locus_tag="RTM1035_08739" CDS complement(1790569..1791114) /locus_tag="RTM1035_08739" /note="COG0406 Fructose-2,6-bisphosphatase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08739" /db_xref="CDD:32245" /translation="MRFLLTFWMIVAGSLAGAADLSALKAPGVVALMRHALAPGTGDP AAFRLRDCATQRNLDARGRAQAQETGAALRAAGVTFDHVWSSRWCRALDTAALMEIGT VVEQPPLDSFYAGQGDPEGQTKATLQMIETLPEAARVLIVTHQVNITALTGLGVGSGE IIVTRRGAKGLIPVGRYMIAP" gene complement(1791168..1791455) /locus_tag="RTM1035_08744" CDS complement(1791168..1791455) /locus_tag="RTM1035_08744" /note="COG5470 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08744" /db_xref="CDD:46929" /translation="MPALWIAHVTVTDTEAYGRYAALAGPAIAKHGGVFIARGGRFVQ LEGKERPRNVVARFPTVEDAEACYHSPEYQAALDHARGASERELVIVEITE" gene complement(1791480..1791764) /locus_tag="RTM1035_08749" CDS complement(1791480..1791764) /locus_tag="RTM1035_08749" /note="COG5470 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08749" /db_xref="CDD:46929" /translation="MSAYIIARITVTNPLDYQSYASQTVATAEKFGGRFLVKGGAQQV LEGNCPDRHVIIEFPDRARALEWYGSDAYRRILPLALNSSERDIVLVDGI" gene complement(1791774..1794455) /gene="alaS" /locus_tag="RTM1035_08754" CDS complement(1791774..1794455) /gene="alaS" /locus_tag="RTM1035_08754" /EC_number="6.1.1.7" /note="COG0013 Alanyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="alanyl-tRNA synthetase" /protein_id="jcventer:1101493006649_RTM1035_08754" /db_xref="CDD:30363" /translation="MPMPTLNEIRSTFLSFFERNDHRVVDSSPLVPRNDPTLMFTNSG MVQFKNCFTGVEHRDYVRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGD YFKEQAIPYAWDLLTKDFGIDKSKLLVTVYHTDDEAANIWKKYAGLSDDRIIRIKTDD NFWSMGSTGPCGPCTEIFYDHGDSIWGGPPGSAEEDGDRFIEIWNLVFMQNERFEDGS MRALDMQSIDTGMGLERIGALLQGKHDNYDTDLMRSLIEASAHATSQDPDGPGRVHHR VIADHLRSTSFLMADGVMPSNEGRGYVLRRIMRRAMRHAHMLGAKDPVMHRLVPALVA QMGQAFPELGRAQAMIEETLKLEETRFKQTLERGLRLLDDELSDLAEGAALPGVTAFK LYDTYGFPLDLTQDALREKGRDVDTAGFDAAMAEQKAKARAAWAGTGEAADQAVWFDI AEEKGTTDFLGYDTERAEGQIVALVRDGVRVSAATMGESVQIVLNQTPFYAESGGQVG DSGLLKTETGQVRVTDTKKVAGVFVHIAVVETGEIKAGQAAQLEVSHARRSAIRANHS ATHLLHEALRGALGEHVAQRGSLNAEDRLRFDFSHAKALSAAELERVEREVNDYIRQN APVETRIMAPDDARALGAQALFGEKYGDEVRVVSMGQAEGSGKGADGRTYSIELCGGT HVRRTGDIGVFVALAESASSAGVRRIEALTGAAAFDYLSGQAARLGQVASDLKARPED VAERVKVLMEERRALANEVAQLRRELAMSGGAGQGGGAEAREVGGVKLIAQVLTGVQG KDLPPLIDEHKARLGSGAVLLIADTGGKVAVAAGVTEDLTDRISAVEMVRAAVAELGG KGGGGRADMAQGGGTSMDGAEAAIAAATGVIEGVMTS" gene complement(1794587..1795660) /gene="recA" /locus_tag="RTM1035_08759" CDS complement(1794587..1795660) /gene="recA" /locus_tag="RTM1035_08759" /note="COG0468 RecA/RadA recombinase" /codon_start=1 /transl_table=11 /product="recombinase A" /protein_id="jcventer:1101493006649_RTM1035_08759" /db_xref="CDD:40254" /translation="MATADLLSMDNKRNADKQKALDSALAQIERQFGKGSIMKLGGDN AVKDIEATSTGSLGLDIALGIGGIPKGRIVEIYGPESSGKTTLTLHCVAEEQKKGGVC AFVDAEHALDPVYARKLGVDLDELLISQPDTGEQALEIVDTLVRSGAVSMIVVDSVAA LTPKSELEGEMGDSSVGVHARLMSQAMRKLTGSISRTNCTVIFINQIRMKIGVMFGSP ETTTGGNALKFYSSVRLDIRRIGSIKDRDEVVGNTTRVKVVKNKVAPPFKQVEFDIMF GEGISKTGELIDIGVKAGVVEKSGSWYSYGDQRIGQGRENTKGFLRDNPAMAIEIEDK IRASHGLDFHMTESSDDGDVMEA" gene 1795852..1796505 /locus_tag="RTM1035_08764" CDS 1795852..1796505 /locus_tag="RTM1035_08764" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08764" /translation="MLVFSKARLVLLSVPKTGSTAYETALAPQAAIAVSAPPELKHAP VFRYNRFFRPMIERFFDGPFDIVAVMREPRDWLGSWYRYRQRPELAGHANSTQGLSFD DFVSAYCTGEPPAYARVGSQAKFLEPQRSGAQVTHLFRYEDQPGLRSFLAARLGVAVD PAPLNRSPALPLSLSPRIETRLRRKYAEDFTLWSGIGAGGAYTPQPARAKPEPDAQT" gene complement(1796533..1798842) /locus_tag="RTM1035_08769" CDS complement(1796533..1798842) /locus_tag="RTM1035_08769" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="multi-sensor hybrid histidine kinase" /protein_id="jcventer:1101493006649_RTM1035_08769" /db_xref="CDD:33926" /translation="MAFIPQAGEQFQQAALRLGPRAGLLMLAAALFAATAFFVPPGQG QWLLVLVAATLGGVALWVMVVTRGINRRAKGGRQAVAHLAQDMLEADPVPLVLTGGAG HLIHANAAARRLLAADRATSLVGALREVLANPEPILFRMEARALAKGAAVEDLVTRGG HLRIGVHRSGDEHFLWRIEKSTENVPREAEAQALPMLTLGRRDAVLFMNAAARDLVGE RVRTLDRLCVAPPLRPGAVNDIATPDGPMPCLVVVREGMAGRREMFLLPGVEGGARAL DGWAFFDALPVPLLKVSARGLIQLSNRPARELLGVESVTALSLGDTLEGLGRSITDWL GDAAAGRGTVHAEFLRVRRQDREVFVQVTLNRTMEGDEPVLIAVLSDATELKTLEAQF VQSQKMQAIGQLAGGVAHDFNNLLTAISGHCDLLLLRHDQGDPDYGDLMQINQNANRA AALVSQLLAYSRKQTLRPEVIDLRDTLADLTHLLNRLVGEKISLSLSHDPTLAAIRAD KRQLEQVLMNLVVNSRDAMPAGGEIRIVTHNLTLTEALCRDRAVVQPGRYVSVQVIDA GAGIAPDKLQKVFEPFFTTKRTGEGTGLGLSTAYGIVKQTGGFIFVDSTLGEGTCFQL LFPAYLGEPQSVREVPRLAVSETRGCGVVLLVEDEAPVRAFASRALQLRGFTVLEAES AEDALEILEDPDLQVDVFVTDVVMPGIDGPGWVRRALTTRPAARVVFMSGYAEETFGD RQACIPQSVFLPKPFSLNELTETVQRQLR" gene complement(1798941..1800092) /locus_tag="RTM1035_08774" CDS complement(1798941..1800092) /locus_tag="RTM1035_08774" /note="COG0144 tRNA and rRNA cytosine-C5-methylases" /codon_start=1 /transl_table=11 /product="NOL1/NOP2/sun family protein" /protein_id="jcventer:1101493006649_RTM1035_08774" /db_xref="CDD:30493" /translation="MTPGARVAAAIEVLERIRAGEPAEKALTNWARTARYAGSKDRAA LRDHVFSVLRCWRSCAAWGGGEDGRALMLGSLRLQGIDADTVFTGEGHAPAPLTEVER VSAVPDATAVRDLPDWLWERFEASLGANAEAAVEALRVRAPIMLRVNARRATRAAAQA RLASEGIVAQPVEIARHALQVIDGERKITTSQCYAEGWVELQDGSSQAAMEALDLPDG ARVLDYCAGGGGKVLALAARVTGAFFAHDAAPQRMRDLPVRAARAGVDVGLLTQPEGE FDLVLCDAPCSGSGTWRRTPEAKWALTPERLEELTRLQLGILSEAAPLVAPAGRLVYA TCSVLKEENQDVIARFASENPEWTVRYMQHWPISETGDGFFLSQLERVR" gene complement(1800132..1801580) /locus_tag="RTM1035_08779" CDS complement(1800132..1801580) /locus_tag="RTM1035_08779" /note="COG0516 IMP dehydrogenase/GMP reductase" /codon_start=1 /transl_table=11 /product="inosine-5'-monophosphate dehydrogenase" /protein_id="jcventer:1101493006649_RTM1035_08779" /db_xref="CDD:40567" /translation="MEIREALTFDDVLLVPAASSVLPNTADTRTRVTQSITLNIPLLS SAMDTVTEARMAISMAQSGGMGVIHRNLTIEEQAREVRRVKRFESGIVYNPITLSPDQ TLADAKALQDRYNVTGFPVVDETGRVVGIVTNRDMRFAEDDRTPVRVMMTSNDLAILQ EPADRDEAKSLMKARRIEKLLVTDKAGKLTGLLTLRDTEQAVLNPTACKDDLGRLRVA AASTVGDAGFERSQALIDAGVDMVVIDTAHGHSEGVARAVERIKALSNAVQVVAGNVA TAEATRALIGAGADAVKVGIGPGSICTTRMVAGVGVPQLTAVMDSARAAGDVPVIADG GIKFSGDFAKAIAAGASCAMVGSMLAGTDESPGEVILYQGRSFKAYRGMGSLGAMARG SADRYFQKDAASDKLVPEGVEGQVPYKGAAGSVIHQLVGGLRAAMGYTGCATVEEMRH NCQFVRITGAGLKESHVHDVQITRESPNYRIG" gene complement(1801659..1801907) /locus_tag="RTM1035_08784" CDS complement(1801659..1801907) /locus_tag="RTM1035_08784" /note="COG0759 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08784" /db_xref="CDD:41835" /translation="MSPLAHVLALPIRAYRLILSPWVGWHCRYHPTCSQYALDALEKH GALRGGLLAGWRILRCNPWGQCGHDPVPEPRKRRDAAE" gene complement(1801904..1802233) /locus_tag="RTM1035_08789" CDS complement(1801904..1802233) /locus_tag="RTM1035_08789" /codon_start=1 /transl_table=11 /product="ribonuclease P protein component" /protein_id="jcventer:1101493006649_RTM1035_08789" /translation="MLRKRADFLAAARARRQGTGSMLVQGRDRRDGDTAIRVGFTCSK KVGNAVARNRAKRRLRALARELLPAQGLPGWDYVLIGKAEETGARPYEALKRDLAYAL RKLSGGA" gene complement(1802368..1802502) /gene="rpmH" /locus_tag="RTM1035_08794" CDS complement(1802368..1802502) /gene="rpmH" /locus_tag="RTM1035_08794" /note="COG0230 Ribosomal protein L34" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L34" /protein_id="jcventer:1101493006649_RTM1035_08794" /db_xref="CDD:30579" /translation="MKRTFQPSNLVRKHRHGFRARMATKAGRKILNARRARGRKSLCA " gene 1802797..1803537 /locus_tag="RTM1035_08799" CDS 1802797..1803537 /locus_tag="RTM1035_08799" /note="COG0398 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08799" /db_xref="CDD:30747" /translation="MDHSTGNSKGAKPSVARHLPLAIILIVAVVGFITLRDYLTFDTL RDNREALLAYRDANITLMALAFIAIYFVIVAFSLPGAAVASVTGGFLFGLVLGTGFNV IAASLGAFAIFLAARAGLGQTLAAKLETSDGTLKRLKEGLHENEISVLFLMRLVPAVP FFVANLLPALVGVRFFNFAFTTVLGIIPGAVVFTWIGVGLGEVFDRGGTPDLSLLWEP QIIGPILGLSALAAMPMILKALRGKKEI" gene 1803540..1804958 /locus_tag="RTM1035_08804" CDS 1803540..1804958 /locus_tag="RTM1035_08804" /note="COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /codon_start=1 /transl_table=11 /product="mercuric reductase, putative" /protein_id="jcventer:1101493006649_RTM1035_08804" /db_xref="CDD:31441" /translation="MTRLKTDLLVIGAGSGGLSLAAGAVQMGASVILLEGHKMGGDCL NFGCVPSKALIASGKAAYAQSHAAQFGIADQSPKVDYAAAKDHVADIIAQIEPVDSQE RFEGLGVRVIRDYGEFLSPTEVKAGEHIITARRIVIATGSSPFVPPIPGLDTVPYETN ETLFDLRERPDHLLVVGGGPIGMEMAQAHRRLGCAVTVIEGAKVLGNDDPEMAAVVID QFRAEGIEIEEGALAAEIRGQAGAIEIEAKDGRIFKGSHLLMAVGRKSNTDRLNLDAA GIETTKRGIKVDASMRTTNRRVYAIGDVAGGLQFTHVAGYHAGLIIRQALLGLPAKNR TDHIPWATYTDPELAQVGLTEAQAREEHGGNLEVVRFHYSHNDRAIADRKTAGLIKVM VVRGRPVGVSIAGAQAGELINLWALVLANGLKMKHVANMVAPYPTMGEINKRAAGAYF SPRLFDSAGVKRIVGFVQRWLP" gene 1804986..1806377 /locus_tag="RTM1035_08809" CDS 1804986..1806377 /locus_tag="RTM1035_08809" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="periplasmic sensor signal transduction histidine kinase" /protein_id="jcventer:1101493006649_RTM1035_08809" /db_xref="CDD:30987" /translation="MLNSLSGRFLILTAIFVMLAEILIFVPSIARFREDYLLTRLERS QIASLVLLADEEVTPDLQEELLRNAEVFNVVLLRDDARQLILSSPVPEPVAQTFDLRD APAITLIRDAMMRLVTPDRQIIRVIGEPVRMGGMLIEITLDSSGLRAAMIDYGLRILW LSLVISIFTAVLLFLAVRVTLVKPIKRVVAAMQTYAAAPEDVRRVLRPTARVKELREA EETLQSLQTQLTGALKQKEHLAQLGGAVAKVNHDLRNILTSAQLFTDRIETSEDPTVK RLAPKLINALTRAVHLCEATLAYGKAEEPGPVFARLYLADVVADVIDSERLAAGDADV SFAEDVPGDLVVLADAEQLYRIIGNLVRNARQAIVNSGRPGEISVMADEDAAEWMIRV ADTGPGLPRRAREHLFKPFQGGTTKGGSGLGLTIAAELVRGHGGTLILERSDATGTAF CITLPKGNFGATS" gene 1806434..1806507 /locus_tag="RTM1035_t09478" tRNA 1806434..1806507 /locus_tag="RTM1035_t09478" /product="tRNA-Arg" gene complement(1806750..1808471) /locus_tag="RTM1035_08814" CDS complement(1806750..1808471) /locus_tag="RTM1035_08814" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="type I secretion target repeat protein" /protein_id="jcventer:1101493006649_RTM1035_08814" /translation="MTVTVGIAPPPPPPTRDGIVDGTAGDDLIDLGYAGDPDGDFVDN DDALLPGAAPNDDSIRAGAGDDVVFAGVGDDQVDGADGADLIFGEDGSDTIDGGAGND TIDSGTSTSTLPLPDLGFGTTVPADLDPENDRDLVFGGDGDDVITTGDDADTISGGAG ADLIDGGIDADVIDGDDGNDTLIGSEGSDTINGGAGDDVIFGGLEEGFPDSINIPDAT DPEPGNGRDLIDGGDGNDTIFGQDDDDTILGGAGDDVIDGGIDNDFIVGADGNDSLIG GQGDDTITGGAGNDTISGGLGADRLVGLDDRDVFVDVGAGDTIDGGTGGDDFDTLDLR GLGRFEIVGQTTDPDGDSTSGTVNFQDRDGTVTGSLVFGEIENLIPCFTPGTAIATPR GEKLVEELKVGDKVITRDNGLQEIRWIGQRGLSGDELARSPHLRPILIRAGSLGHGLP ERDMLLSPQHRILLNSDRAALYFEEREVLAAAKHLIGIEGVSQVETRAATYIHFMCDQ HEVVLSNGTWTESFQPGEQVLDGMGAAQRDEIYDLFPELRAVEGIEAYQAARRSLKRH EAQLLVR" gene complement(1808511..1809932) /locus_tag="RTM1035_08819" CDS complement(1808511..1809932) /locus_tag="RTM1035_08819" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="type I secretion target repeat protein" /protein_id="jcventer:1101493006649_RTM1035_08819" /translation="MAINRVDGDNSGNRIDIAYTGDPEGDRIDANDAPDGSNDDVVDG FGGDDTILAGAGNDTVFAGSGSDSVEGGAGNDLLVGDTPDATAGAREVFQWSEAPDPN DADPIDAGDPITAFTQNTGSVDVTFSVLTSTVTDDTTFADNPQNVTGVVTDGTVADGG SSLSADLAAPGSTDLKLEFSSEVSNVSFNINDLDGTENVQIFAFDAADNLIPVTLVGG SAVTVLSAEQAMGAGSGTDDGPAHSLTVSIAGPVSQLVIRYSDADGTSDGLNVTDVYF GLTGGVVDAGLPGDDTLVGGEGDDTLLGEAGNDVLSGGAGADNISGGADEDLIIGGTA GDVVDGGSTGVDNDTLDLRGAGPLRVVDETVDPDGNSTSGRVEFLGSDGAVTGDMTFA EIENLIRPDNTVPDAVNDDGVTTGFETEVTIPVLANDTDADFDPLSVTGATDGANGTT TVNGDGTVTYTPNAGFSGTDTFD" gene complement(1810662..1810734) /locus_tag="RTM1035_t09484" tRNA complement(1810662..1810734) /locus_tag="RTM1035_t09484" /product="tRNA-Thr" gene complement(1810788..1811687) /locus_tag="RTM1035_08824" CDS complement(1810788..1811687) /locus_tag="RTM1035_08824" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08824" /translation="MIQETGKRMQVVIHAGAHHTDEDRLINCLSANREMLARHGTNVP DPQRYRRLVRDVLHHAQDAGLAPDARDVLVDAISNEGAVDRLVLSNPGFFGTPKMAVN GGVLYGAAEHRLNLFRQLFPDDHLELFIGVVNPATFLPPLLKETDFDTVEALLRGHDA AHLRWSELITRVLRHHPDIPVTVWCNEDTPLIWSQVVREMAGIDPTVAFEGEFSLIEE IMTPAGRERFRGYLASHPGLTEVQKRRVVAAFLDKFADEAAIEEELDAPGWTDALVAK LTELYDEDLYTIQRMQGVQVITP" gene 1811800..1812261 /locus_tag="RTM1035_08829" CDS 1811800..1812261 /locus_tag="RTM1035_08829" /note="COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /codon_start=1 /transl_table=11 /product="(2Fe-2S)-binding protein" /protein_id="jcventer:1101493006649_RTM1035_08829" /db_xref="CDD:32263" /translation="MQLTVNGTVHSLEDLEPEMPLLWALRDVLGLNGPKYGCGIAQCG ACTVHIDGVATRSCQVAVGDVWGPVTTIEGLGTPDVPHPVQAAWIAHQVAQCGYCQSG QIMQAASLLSETPDPTDTEIDDALSGNLCRCGTYPRIREAVKTAARTLKGA" gene 1812265..1814505 /locus_tag="RTM1035_08834" CDS 1812265..1814505 /locus_tag="RTM1035_08834" /note="COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /codon_start=1 /transl_table=11 /product="aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein" /protein_id="jcventer:1101493006649_RTM1035_08834" /db_xref="CDD:31718" /translation="MGRAKTIARRTVLIGSAAIAGGVAFGVWRYKTPYANPLLTDLPE GAAALTPYVLITSDAITLITPRADKGQGAVSLQAALIAEELDVDLDQIKTDPGPPSPA YYNTALSGDAVPFRATDDSWLAETVRGLADAPMKFLGMQITGGSTTVPDSYDKLRHAG AVARETLKATAARLHNISVTDLRTDRGAVILPDGTGLSYQSLAAEAANTDPVTDVTLR APSDWRLIGQPMQRIDIVAKSTGTQNYGIDVTLPNMAHAALRLNPAMGGARLSHDATP ALAMRGVIKVVALPQGVAVIADNTWRAMQAVAAIPVEWGPAPIPSEMDAHWQALSDSF TPDRQDSQFRDSGDVETALSEGPDFEVEYRAPYLAHAPLEPLNATVLYTPERVDIWTG TQVPRFVQNNVAKLTNLTPDAIHVHALMIGGSFGHRLEDEVTRHATRIAMELPGRPVK LTYSREEDMTHDFPRQIAMARGRGRVANGQVAAYDLGIAMPSVLASQMGRQGIPAPGP DLQIVAGAWDQPFDIPHYRVTGYRTPELTPISSWRSVGASSNGFFHDSLLDELIHAAG ADPLAERLRLCNHAPSRQVLEAVGEMSNWGSPLAPGQGRGVAFCLSFGVPCAQVVEVT NTENGLRLDHVFVAADVGRILDPINFEGLVKGGVLFGLGHAMHGQITYAGGAAEQMNF DTFQSLRLNQCPEITVRGLENGPKIKGIGEPPVPPAAPALANAIFAATGQRLREMPFE KFVKFL" gene 1814549..1815601 /locus_tag="RTM1035_08839" CDS 1814549..1815601 /locus_tag="RTM1035_08839" /note="COG3180 Putative ammonia monooxygenase" /codon_start=1 /transl_table=11 /product="Putative ammonia monooxygenase" /protein_id="jcventer:1101493006649_RTM1035_08839" /db_xref="CDD:32993" /translation="MPIHATTLLLLTCSALSGFVGQAIGLPLPFLLGPLAISALIATA LPERLPSGYRFPQKLRLMFIAIIGLMIGAQVTPALFTEAHHYALTFGAVTLFVVLAHT MGYTIFRHLGGYDPTTAFYASTPGGLYESIEMGEAAGADVTRLMMQQFLRIIVVVTAL PLGLSLWLGAPVGSSAGMTMARPDVPWSDLPLIVLAGLGGLGLGHLLRLPAGQMTGPM ALAAALSLSGWLSFDIPQWLVNMAQIVLGTALGMRFTGLSRGLLLRGTALALAAVGSM LALGVVLAVTLHEMTGEAVDVLLITLAPGGVTEMALVALSLQANPAFVTIHHIYRIVL TVLTLGVITRLRQRKG" gene 1815710..1816465 /locus_tag="RTM1035_08844" CDS 1815710..1816465 /locus_tag="RTM1035_08844" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="short-chain dehydrogenase/reductase SDR" /protein_id="jcventer:1101493006649_RTM1035_08844" /db_xref="CDD:40206" /translation="MRIEDTAAIITGGASGLGEATARHFRTMGAQVTLLDRDAERGAA IAADIGAYFVETDVTNEASVAAAIAAATSAMGRITAAINCAGIATGAKVLGRDGPHPL DLFRRTLDINLVGSFNVARLAAAQMALNTPDADGARGVIINTASIAAFDGQKGQAAYA ASKGGIVGLSLPMARDLAREGIRVMAIAPGTFATPMLRGLPQEVQDSLAAEVTFPKRL GDPAEYARLAAFIIDCGYLNGEVIRLDGALRMQ" gene complement(1816469..1818286) /locus_tag="RTM1035_08849" CDS complement(1816469..1818286) /locus_tag="RTM1035_08849" /note="COG0488 ATPase components of ABC transporters with duplicated ATPase domains" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /protein_id="jcventer:1101493006649_RTM1035_08849" /db_xref="CDD:30834" /translation="MARAPLLQLTDISLTFGGEPVFHDLSLVVQPGDRVALVGRNGSG KSTLMKVMAGLVEPDRGLRVVTPGISVGYMEQEPDMVGFTTLGDYAASLLDPAEAYRV EMAGEGLKFDPARPVSTASGGERRRAALAKLMAEAPDLMLLDEPTNHLDIEAIAWLEN ELRETRKGFVLISHDRAFLRELTRATLWIDRGMTRRQEKGFENFEAWRDKVWDDEDQQ RHKLDRKIKSEARWAVEGISARRKRNQGRVRALAELRAERSSQIRRQGTAAMAFDSGP TSGRKVIEAVDISKAYGDKLILQKFSIKILRGDRVAFVGPNGVGKTTLLKMLLKEIEP DSGAVTHGTNLVPAVFDQARAQLDPEMTLWESLTGDADMRVSGQADQVLVRGQPRHVV AYLKDFLFDERQARAPVKSLSGGEKARLLLAKLMARESNLLVLDEPTNDLDIETLDLL QELLDDFDGTVLLVSHDRDFLDRVATTTIAMEGDGRATTYAGGWSDYRAQRGADAAME ADKKANKTDAKAPELKQSKAAVTRLSFTEKHRLEELPAVMARLAAEIGKLEELLSDAA LFAREPVKFKKATEALTTRQSALAEAEEEWLALAERAEG" gene complement(1818328..1819065) /locus_tag="RTM1035_08854" CDS complement(1818328..1819065) /locus_tag="RTM1035_08854" /note="COG3176 Putative hemolysin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08854" /db_xref="CDD:32989" /translation="MAGLGNQRYQARIGTTPEDRVAAQRLRARAFLGEADGLDCDRFD DICTHVLIEETGSGALVCCFRMLMLNGGAEIAQSYSAQFYDLSALAGFEGKMAEMGRF CIAPGRLDPDILRVAWAAMTRFVDDNGVEMLFGCSSFHGTKTETYLDAFAMLRERHLA PRRWWPQVKAPAVFRFAERLRRHKPDLKLAMRHMPPLLRTYLMMGGWVSDHAVIDRHL NTLHVFTGVEIGAIPATRKRLLRALAG" gene complement(1819144..1819551) /locus_tag="RTM1035_08859" CDS complement(1819144..1819551) /locus_tag="RTM1035_08859" /note="COG2913 Small protein A (tmRNA-binding)" /codon_start=1 /transl_table=11 /product="lipoprotein, SmpA/OmlA family" /protein_id="jcventer:1101493006649_RTM1035_08859" /db_xref="CDD:32737" /translation="MVVTGCAATYRNHGYVPPEEDLQNLVVGVDSRATVDDVIGPPSL SGVLADGDYYYVRSRVREYGMFRPQVVERRVLAISFNDNDTIANIEEFGLEDGQVVPL ARRVTDSSVVSNGFLRQLLSNIGNINPVEGFGN" gene 1819691..1820254 /locus_tag="RTM1035_08864" CDS 1819691..1820254 /locus_tag="RTM1035_08864" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08864" /db_xref="CDD:42586" /translation="MSQHPQNTRAIRVADLSARRPVTFDIAPDAAEMARIASDLGVLG LRKLRLRGTLTAEGRADWLLQAELGATVSQPCVVTLEPVQTRIDESVMRRFSPDARLD APDPGAEIEMPEDDTLEPLGTEIDLARVMIEALSLALPPYPRKDGAELGQLTVAEEGV TPMQDEETKPFAALSGLRDKLGKPDTE" gene 1820414..1820620 /locus_tag="RTM1035_08869" CDS 1820414..1820620 /locus_tag="RTM1035_08869" /note="COG0333 Ribosomal protein L32" /codon_start=1 /transl_table=11 /product="ribosomal protein L32" /protein_id="jcventer:1101493006649_RTM1035_08869" /db_xref="CDD:30681" /translation="MAVQQNKVSKSRRNNRRAHDALVAGNPNECTNCGELKRPHHVCS ACGHYADREVVALVEEIDLEDDAA" gene 1820644..1821750 /locus_tag="RTM1035_08874" CDS 1820644..1821750 /locus_tag="RTM1035_08874" /note="COG0416 Fatty acid/phospholipid biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="fatty acid/phospholipid synthesis protein" /protein_id="jcventer:1101493006649_RTM1035_08874" /db_xref="CDD:30765" /translation="MTARRDHSKAGAGRTIISIDAMGGDQGPATVVAGIAYSASKNPD IGFIVHGPKEELERLIAKRRGLAERCEIRHAPEVVTMNDKPSHVVRHGRDTSMWSALE SVRMGEATVCVSCGNTGALMLMSVLRLRKLPGIYRPAIAVMWPSKNPQKHNIMLDGGA DIRADAKDLMQYALMGASYARNGFGLERPRIGLLNVGTEEHKGRAELKEAYDLIAANA RIADFDFVGFVEGRDLPGTKCDVIVTDGFTGNVALKTGEGIAKLIADLLREAFAYSFL SRLASVLAYTSLARLKKRIDPRRANGGVFLGLNGTVVKSHGAADSMGVSSAIKLAFEL AQSGFSERLAARVASAALLDQDAHPEPQPEAESE" gene 1821747..1822721 /locus_tag="RTM1035_08879" CDS 1821747..1822721 /locus_tag="RTM1035_08879" /note="COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) synthase III" /protein_id="jcventer:1101493006649_RTM1035_08879" /db_xref="CDD:29417" /translation="MTLRAVVQGIGHYLPERIVPNAEFEATLDTSDEWIRTRSGIERR HFAAKDQPTSDLAVRAARAALEHAGLTPDDIDGIVVATSTPDLTFPSVATMVQSELGM TRGFGFDVQAVCAGFIYALTTANALLLSGQAQRVLVIGAETFSRIMDWTDRSTCVLFG DGAGALVLGLEEGAGTSEDRGILSADLNSDGRYRDMLYVDGGVSTTGEAGKLRMQGNP LFRQAVEKLASTAETALAKIGLSGSDVDWIVPHQANIRIIQGTAKKLGLPMERVIVTV QDHGNTSAASIPLALSVGVASGKIKRGDLLLAEAIGGGLAWGAVALRW" gene 1822833..1823135 /locus_tag="RTM1035_08884" CDS 1822833..1823135 /locus_tag="RTM1035_08884" /note="COG0776 Bacterial nucleoid DNA-binding protein" /codon_start=1 /transl_table=11 /product="integration host factor, alpha subunit" /protein_id="jcventer:1101493006649_RTM1035_08884" /db_xref="CDD:40315" /translation="MTDKTLTRMDLSEAIFREVGLSRNDAAQLVESVLGHMSDALVRG EQVKISSFGTFSVRDKTARVGRNPKTGEEVPINPRRVLTFRPSHLMKDRVADGTKS" gene 1823150..1824028 /locus_tag="RTM1035_08889" CDS 1823150..1824028 /locus_tag="RTM1035_08889" /note="COG0789 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MerR family protein" /protein_id="jcventer:1101493006649_RTM1035_08889" /db_xref="CDD:29694" /translation="MGKAADAFRTISEVADWLEVPAHVLRFWESKFTQIKPVKRAGGR RYYRPADMALLGGIKVLLHDQGMTIKGAQKFLRENGIQQVSDMSPPLDEEAQGALSGI ALDVPSVPARPADVLAFTRPDGADDPAADPEDTAEVAVEPEALDDGAYEADAEAPLSP QTKAPAPKEDLDAPALPPIADQTPHEAPPAAPELSDTAPSFHTAPEPEGDTAAGAEDE IPSLEPDAPPAQTAPHPRAPSDLPADPSDDVAAAPGLLTALSALPRPVSPQLAARLAP LVAALRTHAASGTKDR" gene 1824096..1824169 /locus_tag="RTM1035_t09480" tRNA 1824096..1824169 /locus_tag="RTM1035_t09480" /product="tRNA-Pro" gene 1824252..1825325 /locus_tag="RTM1035_08894" CDS 1824252..1825325 /locus_tag="RTM1035_08894" /EC_number="3.5.4.13" /note="COG0717 Deoxycytidine deaminase" /codon_start=1 /transl_table=11 /product="2'-deoxycytidine 5'-triphosphate deaminase" /protein_id="jcventer:1101493006649_RTM1035_08894" /db_xref="CDD:46448" /translation="MTGVLSSQQIRAMIETGTLLGTPAILPEQVQPASLDLRLGQVAY RVRASFLTGAGRTVTDRLAEFEMHRIDLKAGAVLEKGCVYVVPLMESLALPMGVQAVA NAKSSTGRLDLLTRLITDGGVEFDRVTPGYAGPLYAEICPRSFSVLVRPGMRLNQIRF RAGQAVLSDDALRALHAQTPLVDGTAMIDDGLGFSVDLRPVSGTLVGYRAKPHTGVID LDRIGRYDPAAYWEEVHSENGQIILDPGAFYILVSREAVHIPPECAAEMAPYVAMVGE FRVHYAGFFDPGFGHAAAGGTGSRGVLEVRCHEAPFVLEHGQIVGRLVYERMDQVPDH LYGAGIASNYQGQGLKLSKHFKA" gene complement(1825330..1825506) /locus_tag="RTM1035_08899" CDS complement(1825330..1825506) /locus_tag="RTM1035_08899" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08899" /translation="MNANQMINMVVRMILQRVTRSGMNAVSKRMSGGDDAAARKTVQR GRQAMKIGRKMGRF" gene complement(1825743..1826030) /locus_tag="RTM1035_08904" CDS complement(1825743..1826030) /locus_tag="RTM1035_08904" /note="COG0236 Acyl carrier protein" /codon_start=1 /transl_table=11 /product="phosphopantetheine attachment site domain protein" /protein_id="jcventer:1101493006649_RTM1035_08904" /db_xref="CDD:40636" /translation="MPSETQHPARADAKSIETWMASYISSVIDVAQDPFPVDDRFDTY GLDSVEITIMCGMMEEEFEIEVNPDQVFDHPSVTAFSQHLAKRLDERSVAA" gene 1826101..1826880 /locus_tag="RTM1035_08909" CDS 1826101..1826880 /locus_tag="RTM1035_08909" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="putative methyltransferase" /protein_id="jcventer:1101493006649_RTM1035_08909" /db_xref="CDD:32408" /translation="MQSHPADQDANESLRLSEQAYDTAIFHPRFRQFYGESDLYNFGF WHDADGQRIDHPGEAARELVRRHIAQDPNRARARRVLDVGCGLGACTAQIASAYPQAD VIGINYSSAQIDHASRLYAGPRISFQRMRAESIAFQDETFDCIHAIETAMHFRTRQQF LEEARRLLRPGGRLILTDVLVEKPTSFVPHENVLPTVRAYRSALEAAGLMPVTVEDIH ADTTLPFVRMLKRNAMAAYARGLERSIKGYVIAVAEKPDEL" gene complement(1826875..1828371) /locus_tag="RTM1035_08914" CDS complement(1826875..1828371) /locus_tag="RTM1035_08914" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="malonyl-CoA synthase" /protein_id="jcventer:1101493006649_RTM1035_08914" /db_xref="CDD:30666" /translation="MTFYQRLKAGWANADAIAFHDGVVTLTYGELDAATGRAASALLA QGLEPGDRICLAMQKSLAQIVVLLGALRAGLVVLPLNPDSPAEVVADQISRTGPVLLI GEREDGWRARTESGPAAVPRCLDADPARPHDPLHATDHTDPDRFSVDDEAGAIILFTS GSTGRPKAVIHSHGALFANTDALRIIWDIDASDRLLHVLPTTHAHGLIVAPMPILLAG GTVVWRPRFDPGDAVAWLPRVTCFMGVPFYYGQLLQHPQFTAGAARQLRLAICGSAPI LPEVREQVEDRLGLPLLERYGMTETLIMTANSPARNRAGSVGLPLPGWSLRIRSLVTH ETAPPQEIGEVEARGPLALPSYLDDWAETARKTAPDDFFRTGDVGWVDTDGFLHITGR ADDLIIYAGLNIQPSEVEAALVAINGVVDVCVFGVPHPHAGQAVMAAVVSAAGTTLTP AAIRAELIGKLPATKIPKRVYVVSTLPRNTMGKLRRDLLRKACEHGTL" gene complement(1828376..1830163) /locus_tag="RTM1035_08919" CDS complement(1828376..1830163) /locus_tag="RTM1035_08919" /note="COG3321 Polyketide synthase modules and related proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08919" /db_xref="CDD:29420" /translation="MDGPAELNRLLRSGQTGIRDIPPDRWALWGLSEDLSLREGFPVT RAGTLDDIAFFDRRPFRISANEAPLIDPQQRLALETSWHALEDAGFSPACLEDAPIGV FMGAGSSDYALRMAQAGISGAGNPHCANGAQNAAISGRISYCLGLTGPSLTIDTACSS GAAAVALAGDNLRLGHCDVALAGGVNALLTVEPFRALSGMSVLSAKGETRSFDATASG FVRSEGCGVLVLKRLSCALAAGDRIHAVLPGWAMGQDGRSNGLSAPSRRAQARVILQA VEAAGLTPTDIGAIEAHGSATVLGDTIEISALADVFGDRIDTKIVVGSVKATLGHLEA AAGVAGLIKAILMVRDGFMPRQPCFATPSPRINWDEAPFEIVRDQRVWPGPRRVMGVS SFGMSGLNAHILVSNADISHHQALPAGGRHLFLLSAASPDSLRTRTSQLLETLRAPGA DLGKIALATRRRWVGLSYRSGFVAASQEEAQEALTRSLASPSPGPVAPAAEIALNIPS DRADLHRVLQQVWPRYALGLSQAAVPDPGTRPETMEDAVLALHLAGATLCLDAISPSA ADGTDLPGYPFDRQRHWFDAVRPARAPRG" gene complement(1830214..1832268) /locus_tag="RTM1035_08924" CDS complement(1830214..1832268) /locus_tag="RTM1035_08924" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="non-ribosomal peptide synthase" /protein_id="jcventer:1101493006649_RTM1035_08924" /db_xref="CDD:30666" /translation="MTQSLFEHCVARAEGAAAALASQTVPGRVLAHAAARPDAACYFF HNPAGPPDVLSFEDLVKRASHVAGVLTAAGCSHGARVALIFEHGPGFVIALFGAFFAG CAAVPVAVPTNETKRTRAGAILAEADCAVLLTSPAIAKTLAEDGIGIAALPPIIALDT VDRAASFIPSRIVPEDVAIIQYTSGSTGHPRGVVVTQGALHAQMCAIDLCLRSESEER VVTWLPPEHDMGLMGGLLFNLWRGDPTYVLAPESFIRRPYLWLDTISKWRGTVSVAPN FAFDLCVRGIPADRLKSLDLSSWRVALNGAEPVQPETLARFADVFKPVGFDPQCFLPC YGLAEATLLVSGAARGGGATTHWFDPEALEAGRVVPLLAGTGRCLVSSGPVRTTGGVR IVEPETGVPCRSDRIGEIWIAGESVGSGYHDRPEESVSTFGQFTATGDGPYLRSGDLG FLWNDELYVTGRIKDIVLWRGRTLHAADLELLITGADPAIRPGRIAAYQRDAGNVDLI VEIAQGRLGADGGTGVAERIWRDLMAGSGVDVARVRLARPGTLMWTSSGKLRRRDTHA RLETECGLLVLDWEPGPLRARGAQIEATRTLAGAIAQKSAGPGAYLRFLTDWVAAAVN CAPQDVDPHLPWADQGMDSLMITEMVVDLEQAVGRDIQPELLFEIPTPSGLALALAQG SS" gene 1832373..1833389 /locus_tag="RTM1035_08929" CDS 1832373..1833389 /locus_tag="RTM1035_08929" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08929" /db_xref="CDD:29296" /translation="MPTRRLLIIGFSNVATRSGFSDPTIDRLRAETPDVTVLRVGLGA QQPHVIPPYLRLAAAKLGPFSHVLFEVNASAFALHPLTTPARGRELLLDMALVAQDIG ADPAFFLHHRRWTSPVHHDFNAQTREFCKEFRIPFLDMAEEWLAEVGADVVAGLLRDD VHTTYEGGEVMADRVTPFLKRCLDQAAWFHAVSLPKPIWRRGLLDTDAILHDHPMERH DCMDLPLHYMRLENTGAVLRFGQEYHAQALVHLFHRAGGHINLRLDPSGHSLQVSTVD PFSYAPRIGTVAFDFYRGLHLREITISPTVEAPEIKLLKGEPERPLRSYIGPLLTLEP ATPS" gene complement(1833427..1835676) /locus_tag="RTM1035_08934" CDS complement(1833427..1835676) /locus_tag="RTM1035_08934" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08934" /db_xref="CDD:32408" /translation="MRWRDQAAVILDEFGRGQALSIDELVARGFLSNVAVYEPALRGP FVARFNTLPHYTRSYFRPDLAIGALAPDGVRNEDLTKLTFDEDSFDLIITSDVMEHLP DVESAFAETLRVLRPGGIHVFTIPNDYPFPDRTEPRVRVEEGAEVHLKPERYHNAGDG TKCLVYTDYGADLADMIRSLGGRLTITRRGGPVEPLNTNATFILRKIASAGKRRPVSS LSGADKPVAEVKSVQGAPTIRTVDEDLCCPICHGTEFEDFNGRSHARCSSCRGVERNR LMWMVLDRLGAFEKGKRILHLAPELGLARKFVELSGDAYHGADLDAERYKSKFLTVRK LDLCVDLAGIPDASYDLIVHSHVLEHLPCSVDGVLQDLDRILAPGGLHFLSVPVRGEH TLEDLSPDLRPVDRLTRFGQEDHMRIFGAVDLQALLTKVWGPGQHLIVPVDLFARDDL RRAVIPTVAWQGVSGHSIFHYRKGARPPAEMLTTQVDAAPPSDVGRSVAPNAASGPQG AKPKTQEADLAANAPTGSRVILGLDALQRDNPWPEFPWDEHAPFHLARDADGDGGREI ILRQILNRDIRLMAEVGCFLGGSLLHWLKAKPDLTVIGIDPWDGDWASFVEGMAPHAN HLSDAEVTRIARLLRKYGNFAVALNALRLFKDRFVPVGCASLEALHDLRRRDIPIELI YLDGFKNRDELDVAHDLFPDAVLCGDNWLWQDQTGAFVVQHSITAFAQDHGFDIEDLR QSWILHRER" gene complement(1836197..1836853) /locus_tag="RTM1035_08939" CDS complement(1836197..1836853) /locus_tag="RTM1035_08939" /note="COG1386 Predicted transcriptional regulator containing the HTH domain" /codon_start=1 /transl_table=11 /product="segregation and condensation protein B" /protein_id="jcventer:1101493006649_RTM1035_08939" /db_xref="CDD:43995" /translation="MSEAPEEKEQSLFQAPPIGEQERMIEAMLFASTEPLTTRDMVER MPHGSDPAEALVHLRKRYEGRGVRVVKVGDAWAIRTAPDLGYLMSRETVETRKLSRAA IETLAIIAYHQPVTRAEIEEIRGVAVSRGTVDQLLEMEWIRFGRRKMTPGRPVTFVVT QEFLDHFGLESARDLPGLKELRAAGLLDNRPPPGTMPQMGSEEDEDESAPGQNELFED " gene complement(1836858..1837646) /locus_tag="RTM1035_08944" CDS complement(1836858..1837646) /locus_tag="RTM1035_08944" /note="COG1354 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="segregation and condensation protein A" /protein_id="jcventer:1101493006649_RTM1035_08944" /db_xref="CDD:31545" /translation="MSEDDFDRDEGPVNVAERLAAEALIVDVDGFEGPLDLLLTLSRT QKVDLRKISVLELARQYLAFVERAKALRLELAADYLVMAAWLAFLKSRLLLPPDPSED GPSGEELAAHLAFQLERLQAMRDCAARLMGRDRLGRDFFARGVPEDVARLRRVTYTAT LLDLMQGYARIRTRDEFRPFVMDRDAIFTMEQALERMRGLIGYAGTWTDILSYLPEGF TTDPGRRRSATASTFAAALELVKEGRAEVRQAEIFAAIELRRKD" gene complement(1837639..1838646) /locus_tag="RTM1035_08949" CDS complement(1837639..1838646) /locus_tag="RTM1035_08949" /note="COG1472 Beta-glucosidase-related glycosidases" /codon_start=1 /transl_table=11 /product="beta-N-acetylhexosaminidase, putative" /protein_id="jcventer:1101493006649_RTM1035_08949" /db_xref="CDD:41008" /translation="MTRFGATILDAEGLRLTTEEKALFRDTRPFGFILFARNIDSPDQ VRALVAEMREAAGHDAMVTIDQEGGRVQRLRAPLWREWPAPLDQAEAAGSRAAEAMYL RYRLIAAELHALGIDSNCAPLVDVAGPATHPFLRNRCYGVDPHTVAHLGRAVANGLLD GGVLPVVKHIPGHGRAEADSHHDLPVVTALKSDLQDTDFAPFRALNDLPLGMTAHLVY SAIDAAPATLSAPMMQVIRDEIGFDGLIMTDDISMKALQGTLPDLSRAALQAGCDVIL HCNGTLAERQAVADAAGEMTEPAQIRADRALTWRKTPQEIDISALSAQLDALTGGCAH E" gene complement(1838643..1839572) /locus_tag="RTM1035_08954" CDS complement(1838643..1839572) /locus_tag="RTM1035_08954" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08954" /translation="MADMHYARPEPGPEHAKLIVRLTNLTGAALSLALIAGVGVWGTK MVLRDVSGVPVVRAAEGPMREAPADPGGDAAANQGLSVNAVAAEGTAAAPADRLVLAP PPLELSLEDVAPLTPTSEVAEATPRAEVTEPAPQAVPEEVQNASILALADQIAAGAAP ITPLEEEVTGPEAVETPDVEDVAVAQAVVRPRARPASLTSVSEAVALAVAAARSAPSD EVDAETIPLGTRLAQLGAFDSAEVARAEWDRLAGRFGDFLDGKQRVIQRAESGGRTFY RLRAMGFADLGDARRFCSALVAERAECIPVVTR" gene complement(1839645..1841390) /locus_tag="RTM1035_08959" CDS complement(1839645..1841390) /locus_tag="RTM1035_08959" /note="COG0018 Arginyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="arginyl-tRNA synthetase" /protein_id="jcventer:1101493006649_RTM1035_08959" /db_xref="CDD:30368" /translation="MNLFTDMRDLVLETLAAMQAGGQLPAGLDMTSVTVEPPRDAAHG DMATNAAMVLAKPAGLKPREIADALAARLAEDGRVESAEVAGPGFLNLRLVPAVWQRV ARAALTEGTGYGRSTLGAGKRVNVEYVSANPTGPLHVGHTRGAVFGDALARLLDYVGY EVTREYYINDGGAQVDVLARSVYLRYLEAHGQAVAFADGTYPGDYLIEVGEALKVQVG DAYVGQPEEVWLEPIRDFATDKMMALIREDLAALGVEMDVFYSEKSLYGTGLIEAAIE DLRSKGLIYRGVLEPPKGKMPEDWEPREQTLFKSTEHGDDVDRPIMKSDGGWTYFAPD IAYHYDKISRGFDLLIDVFGADHGGYVKRMKAAVSALSNGRVPVDIKLCQLVKLYKNG EPFKMSKRAGTFVTLRDVVDQVGADVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFY VQYANARVNSVLRKAAEAGIAVEDATLAQADLSGLTHEAELAVARKIAEWPRLVEIAG RSNEPHRVAFYLYDLASDLHALWNRGNDDASLRFIQEGDVATSQAKIALARAVTVVIS AGLGILGVTPAEEMR" gene complement(1841442..1842083) /locus_tag="RTM1035_08964" CDS complement(1841442..1842083) /locus_tag="RTM1035_08964" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08964" /translation="MVGFAEHVAGKTVLIAAAGCAAGVVLAQGLARAGAQVIVIDRED RRCQALARLVPGRIETLALDVLRPSVCARLGALWGQTPIDLLIHLQPLRMAARLGAVT MGIAGLSRALRPGLQAGQGRSLIVNAVPCAGAGAAERACRLGLDHLGGYLVQEAGGAQ PVHTLRLMRAEGPRRGTTAALSVVLEPAIFLGFAPGGEGGVQSSCVTVCAACD" gene complement(1842185..1843408) /locus_tag="RTM1035_08969" CDS complement(1842185..1843408) /locus_tag="RTM1035_08969" /note="COG0232 dGTP triphosphohydrolase" /codon_start=1 /transl_table=11 /product="deoxyguanosinetriphosphate triphosphohydrolase, putative" /protein_id="jcventer:1101493006649_RTM1035_08969" /db_xref="CDD:30581" /translation="MTAPYASDPAQVRGRRVAEEESAFRSPFQRDRDRIIHSSAFRRL KHKTQVFVAHEGDYFRTRLTHSIEVAQVARTIAGALGLNGELTEAVALAHDLGHPPFA HAGEDTLDALMAPYGGFDHNAQAVRIVTSLERHYAEFDGLNLTWETLEGLAKHNGPVT PLRGDGPVTPLRSDDPVTGSLPYALADYNARHDLELHTHASAEAQVAALSDDIAYNNH DLHDGLRARLFDDDEIAGLPIVGDCYAEVDRLYPGLDRKRRRHEALRRVFGVMVGDVI TRSRYLLEDAAPVSVAEVRHLGRPVIRFSDALWGDLKQIRAFLFARMYRAPEVNDMRL RVHGVVSTLFPHYLNAPDHLPEEWRRDVAQAADETALARLVSDYIAGMTDRFALQEYA SLTGEGARDFSDNGV" gene 1843489..1843812 /locus_tag="RTM1035_08974" CDS 1843489..1843812 /locus_tag="RTM1035_08974" /note="COG0316 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="Iron-sulfur cluster assembly family protein" /protein_id="jcventer:1101493006649_RTM1035_08974" /db_xref="CDD:30664" /translation="MQLPPKVTPRAFARLAEIGAGDQGQALRVAVEGGGCSGFQYEIK LDEPAQDDLILEGDGQKVVVDSTSLPFLAGATIDFSEELIGARFIIDNPNASSSCGCG TSFSM" gene 1843876..1844658 /locus_tag="RTM1035_08979" CDS 1843876..1844658 /locus_tag="RTM1035_08979" /note="COG0708 Exonuclease III" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease III" /protein_id="jcventer:1101493006649_RTM1035_08979" /db_xref="CDD:31052" /translation="MKIATFNINGIKARIDALPAWLDEASPDVALLQEIKSVDDGFPR ELFEERGYNVETHGQKGFNGVAILSKRPLEDVTRGLPGDDTDEQARWIEATVVGDHRA LRLCGLYLPNGNPAPGPKYDYKLAWMDRLHARARDLLASEEPVLMGGDYNIIPQDEDA ARPDAWREDALARPESRAAFRRILNLGFTEAFRAQVQGPGHYTFWDYQAGAWNKNDGI RIDHFLLSPQAADLMTDCGIDKDIRGRDKPSDHVPLWVELNA" gene 1844768..1844971 /locus_tag="RTM1035_08984" CDS 1844768..1844971 /locus_tag="RTM1035_08984" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08984" /translation="MLKKNVGSIDRALRILFGLALLAGFALNREGAYSWLYLIGIIPL VTGLMSSCPLYSILGLSTCPLKK" gene 1845059..1845376 /locus_tag="RTM1035_08989" CDS 1845059..1845376 /locus_tag="RTM1035_08989" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08989" /translation="MKHTMILLMLGITFGGAPAFAANGHCPPGLAKKYNGCQPPGQAK QQGYYRIGDRINEDYIILRNPGRYGLDRNETYYRVGDQIYRVNRETREILDLIGAAAA VLN" gene complement(1845395..1846393) /locus_tag="RTM1035_08994" CDS complement(1845395..1846393) /locus_tag="RTM1035_08994" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_08994" /translation="MRRAAAICGRGLGIAWLLGLAVWIGLSLHFQIAAPWIYLLYLVG VFVWLALVRMLLRGRLRRALGLSAVVLAVWALWWSGIAPRQDRDWMAEVARGVTAETM REGAVLVRNIRDFRWSSPTEAVERWYDLEVQPEQITSVDMIMSVWDSPEIAHTLVSFG FADGRHIVFSGEIRREVGEEFSAIGGFFKRYELVLIAADERDIVHLRTDARGESVSLY PVAMGAGQRAALFRAFLDYGNALAEDPRWYHTLWTNCTTMPYRLVRGIAEGLVFDLRV ILSGRLPGYLYDLGVLPGAGTVPLAELKARAVLPPSPVDGLSSQEYSRLLRQGWRD" gene complement(1846396..1849254) /gene="uvrA" /locus_tag="RTM1035_08999" CDS complement(1846396..1849254) /gene="uvrA" /locus_tag="RTM1035_08999" /note="COG0178 Excinuclease ATPase subunit" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit A" /protein_id="jcventer:1101493006649_RTM1035_08999" /db_xref="CDD:30527" /translation="MADLKYIEVRGAREHNLKNIDVDIPRDQLVVITGLSGSGKSSLA FDTIYAEGQRRYVESLSAYARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVG TVTEIYDYLRLLFARVGTPYSPATGLPIEAQQVQDMVDRVMAMEEGTRAYLLAPIVRD RKGEYRKEFLELRKSGFQRVKVDGQFYELDEPPTLDKKFRHDIDVVVDRLVVKDGLQT RLADSFRTALDLADGIAVLETAPKEGDPERMIFSEKFACPVSGFTIPEIEPRLFSFNA PFGACPECDGLGAELFFDERLVVPDEALKLADGAIAPWRKGKSPYFTQTINSIAKHYE FDRNSPWKDLPAHVKQVFLHGSGEEEIGFRYDEGGRVYQVSRVFEGVIPNMERRYRET DSSWVREEFERYQNNRPCGACGGYRLRAEALAVRIAGLHVGQVVQMSIREALEWCRTV PDHLGKQKNEIARAILKEIRERLGFLNNVGLDYLTLSRNAGTLSGGESQRIRLASQIG SGLTGVLYVLDEPSIGLHQRDNGRLLETLRNLRDQGNTVIVVEHDEEAIRTADYVFDI GPGAGVHGGRVVSHGTPDAVAADPASLTGQYLSGAREIAVPEVRRKGNKKKLTVVKAT GNNLKEVTATFPLGQFVCVSGVSGGGKSTLTIETLFKTASMRLNGARQTPAPCETIKG LEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKARGYKPGRFSFNVK GGRCEACQGDGLIKIEMHFLPDVYVECETCKGARYNRETLEIRFKGKSIADVLDMTVE EAQEFFKAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEAQRVKLSKELAKRSTGRT LYILDEPTTGLHFEDVNKLLEVLHELVDQGNSVIVIEHNLDVIKTADHIIDIGPEGGD GGGEIVAVGTPEEVAEEPRSHTGRYLKEILAARRVAAE" gene 1849473..1849841 /locus_tag="RTM1035_09004" CDS 1849473..1849841 /locus_tag="RTM1035_09004" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09004" /translation="MTLTRRFIALGLPALLFARPAIAHHGWRWTDDGRFELRGLITEA RLGNPHGVLTIDAEGEIWKAEVGQPWRNERAGLTDAMLAPGTDIKIIGKRAADPKERL VKAEAIELSGALFELYPERL" gene 1849841..1850272 /locus_tag="RTM1035_09009" CDS 1849841..1850272 /locus_tag="RTM1035_09009" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09009" /translation="MDWAATLEAQPFAQALRASRWTYPLVNAGHILGLALLIGAVVPM DVRLLRGDLRAIRMLRVYAIGGLCLALACGSLLFAAQASDYVANSWFRWKIVLLVAAL MNAALHLHPLALSRPRQCAAAILSLCLWIAVLLCGRMIAYS" gene complement(1850299..1851138) /locus_tag="RTM1035_09014" CDS complement(1850299..1851138) /locus_tag="RTM1035_09014" /note="COG2607 Predicted ATPase (AAA+ superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09014" /db_xref="CDD:32599" /translation="MSDPLDRIAAALERMAPAPLSAPDFDTADAFVWHVSPDRLEPVR HVSRVDMGLLVGVDRSRDTLLQNTLQFARGLPANNALLWGARGMGKSSLVKAVHAAVR AEGLPLKIVELQREDLPSVSRLLNLLRGAQTRFLLFCDDLSFSHDDQHYKSLKAVLDG GIEGRPDNVVFYATSNRRHLMPRDMIENERSSAINPSEAVEEKVSLSDRFGLWLGFHA CDQDQYLAMIRGYCDAYGVEIDEDTLRAEAIEWQATRGARSGRVAWQYFTDLAGRRGV SVA" gene complement(1851139..1852068) /locus_tag="RTM1035_09019" CDS complement(1851139..1852068) /locus_tag="RTM1035_09019" /note="COG0805 Sec-independent protein secretion pathway component TatC" /codon_start=1 /transl_table=11 /product="twin-arginine translocation protein TatC" /protein_id="jcventer:1101493006649_RTM1035_09019" /db_xref="CDD:40979" /translation="MTPRDEIEDSSAPLIEHLAELRTRLIRSVIAFIIGICLAFAVAE PILQFLLEPIEATLRELGDPSPTMQYTSPQEYLFTLFRISMVFGFALAFPVIGFQMWR FVAPGLYKQEKNAFLPFMIASPMMFLLGASFAHLVVTPLAMAFFLGFADVPSIIADLM TGLVGPEVVPGAAVAPEATGIRITFFGKVNESLDITLKFIIAFGLCFQLPVLLTLMGK AGLVSAIGLKSVRKYAVIGILVLAALVTPPDVVTQLILFVVVYGLYEISIQLVTWVEK KREAELRAQGLWFDEEEAADAAEADASEEKGKN" gene complement(1852065..1852547) /locus_tag="RTM1035_09024" CDS complement(1852065..1852547) /locus_tag="RTM1035_09024" /note="COG1826 Sec-independent protein secretion pathway components" /codon_start=1 /transl_table=11 /product="twin-arginine translocation protein TatB" /protein_id="jcventer:1101493006649_RTM1035_09024" /db_xref="CDD:32011" /translation="MFDLGWTELLLIGIVALIVVGPKDLPGMFRAVGNFVGKAKGMAR EFSRAMNDAADQSGVGDIQKTFKSAANPMKTAMDEVRKTTDSVTRDLNDVTKPTLSAE QQASAEKGRAATAEMAEARKAAKAEAEVAPDKVASKPKAAAKPKAAPKGKTSKPEDEA " gene complement(1852555..1852779) /locus_tag="RTM1035_09029" CDS complement(1852555..1852779) /locus_tag="RTM1035_09029" /note="COG1826 Sec-independent protein secretion pathway components" /codon_start=1 /transl_table=11 /product="sec-independent translocation protein mttA/Hcf106" /protein_id="jcventer:1101493006649_RTM1035_09029" /translation="MLNNIGLPGLLLIAVVVLVLFGRGKISSLMGEVGKGITSFKKGV AEGTKELDDTSKESAETARDVTPTEDKDKV" gene complement(1852941..1854068) /locus_tag="RTM1035_09034" CDS complement(1852941..1854068) /locus_tag="RTM1035_09034" /note="COG1186 Protein chain release factor B" /codon_start=1 /transl_table=11 /product="peptide chain release factor 2" /protein_id="jcventer:1101493006649_RTM1035_09034" /db_xref="CDD:31379" /translation="MRAETQNLVAEIEKSLELLRQRLGWETARHRLEEFNARVEDPTL WDDPARAQTLMRERQALVDALETHDGIKNELEDNLGLIELGEAESDAEVVGEAEAAIK ALAKVAAAKELEALLDGEADSNDTFLEINAGAGGTESCDWASMLARMYVRWAEKRGYT VELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLVRISPFDSAAKRHTSFSSV WVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVRITHMPTGIVVTSSQKS QHQNRDIAMKALKSRLYQLELDRRNAAINEAHDAKGDAGWGNQIRSYVLQPYQMVKDL RTGVETSDTKGVLDGDLDEFMAATLAMNVSGKSRAEAQGGD" gene complement(1854139..1856610) /locus_tag="RTM1035_09039" CDS complement(1854139..1856610) /locus_tag="RTM1035_09039" /note="COG5009 Membrane carboxypeptidase/penicillin-binding protein" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 1A" /protein_id="jcventer:1101493006649_RTM1035_09039" /db_xref="CDD:34614" /translation="MFSLITLVVVVIGLSIGAVLHIYGQDLPSHESLANYTPPTISRI YSGEGRIIDEFARERRLFTPAEDIPDLVKQAFISAEDKNFYTHGGYDAVGIASAIVDA VKSRGRNVRGASTITQQVMKNFLLSGDRQMERKIKEIILATRIEETLSKDDILELYLN EIFLGQNSYGVTAAAQTYFNKTLTDLAPHEAATIAAMPKAPSDYHPVREKERLLERRN FVLREMWENGYLTQAAYEEERAAPLRSVQNGDFPPFSAELPPRDYFTDEIRRQLSLDF GEGEFFSGGLSVRATIDPELQVHAARALRRQLENYDRGQGRWRGTGESLPAEALGDEA AWRAALASVSVARDVDLDGVWHPAVVLGIGDQAMQVGIEGVDGVQEVPRSDIKWLPGD FEATFDLGDVVHVRAVTQEGTFVNWSLRQVPEVQGGFVAMDVNTGRVISMQGGFSYQA SVFNRTTQALRQPGSSFKPFVYAAALDSGYSPATIVIDAPIEINTPQGLWRPRNSSNK FYGPTPLRTGIEQSRNLMTIRLAQEVGMDVVADYAERFGVYENMGRFLANSLGSEETT LYNMVAAYAMFANGGERVRPTLVDRVQDRYGKTVYRHDQRDCVDCGDAGIPADRGPRI VSDRERVMNAVTAYQLTSMLKGVVDRGTASGAINLPVPVAGKTGTTNDARDVWFVGFT SNIAAGCYIGHDQPRGLGRSAYGSSLCGPVFQDFMVEAVKKYGGGPFEVPPGGHFIKI DRFTGARLPDTAEGDNVVAEYFRDGEEPVFGVAYDGGFAMGNDLELFSAGEREQVQEV TTSTGEKARVGGKASFGSMSSGGLY" gene complement(1856756..1857991) /locus_tag="RTM1035_09044" CDS complement(1856756..1857991) /locus_tag="RTM1035_09044" /note="COG0860 N-acetylmuramoyl-L-alanine amidase" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase, family 3" /protein_id="jcventer:1101493006649_RTM1035_09044" /db_xref="CDD:31201" /translation="MSRIIGIGLALALVMGGAAVRAQESVFSGLARLEANASSITDSR RGVEVTLSLSQGVPYRVYTLDAPPRLVLDFQEVDWQGIGAEDLIAGARVKGLRLGQIR PGWSRMVADLDAPYPLEQAGLEIDRVSGRATLKVALGAADAERFAATAGTPALPGWDL PDPKDALAAVPVGVPGEGPLVVVLDPGHGGIDPGAQEGELTEKALMLQFAQELRDELL RAGGFEVVLTRERDEFVSLERRVALAHWAGADVFLSLHADALSGAQARGLSVYTLSES ASDKASAALAERHNRADMLAGVDLSGKDDVVADVLMDLARVETQPRTAHLAQALIESF AAHELPLLSRPLREAGFSVLKAPDIPSVLIELGFLSSPRDLARLRDEEGRARIAAALR AALTAWRDADAARAGLVRQ" gene 1858140..1859147 /locus_tag="RTM1035_09049" CDS 1858140..1859147 /locus_tag="RTM1035_09049" /note="COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006649_RTM1035_09049" /db_xref="CDD:34583" /translation="MTNQTPRPVVTHEDPKVLFEIFVQRKFCDLELASVIHTLQTANM VHGSAHFGWRIISDRPGLVQGNGVCLVRAEPVIPDHCMADFLIVIASKTADPAVWMAR IRSMRRLGRSVILLADASTTFIARTQIETGAVTTHWADAVVLRETQDQPRLTENLSEF SNGIITAAGRGATAELVIGLLARDLPVSDITEIGRHLLLPEIRTSSSTQPFAPEAFHK FYDKAVSDALAIMEDNLTDPLSIAEIADEVDTSQRCLERRFRAVFETSPGHYYKQLRV RRAHHLIQSTKLPLIDIATATGFGSTGTLATAFKKFYGVTPSDMRGKHRERVLDYSAD V" gene complement(1859144..1860196) /locus_tag="RTM1035_09054" CDS complement(1859144..1860196) /locus_tag="RTM1035_09054" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="glycosyl transferase, group 1" /protein_id="jcventer:1101493006649_RTM1035_09054" /db_xref="CDD:40621" /translation="MATEEGRDIAFAVPGDPGLTTGGYLYDRRLGEALVARGLRLRHL RLGDSFPHPDARDMADALAQLSALPRDCPALVDGLAYGALDPEGVARLAAPMVALVHH PLALEPGLSAAQAADMAVRERANLGRARHIVVTSGHIAGLLREAYGVAPERISVARPG FVAPRANAMPDVPPLILSVGLLARRKGHDVLLRALARIADLDWRAVIVGRLHEPETVA ELRGLRDVLGLVERVEIAGEVSQSDLDALYGRATVFALATRYEGYGIVFDEAMGHGLP IVSTQAGAVPDTVAAGAGILVRPEDDAAFAEALRRMLSEPALRAGCACAARKAAQGLG DWAAAAEVVAAALNRP" gene complement(1860186..1861160) /locus_tag="RTM1035_09059" CDS complement(1860186..1861160) /locus_tag="RTM1035_09059" /note="COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="putative dehydrogenase" /protein_id="jcventer:1101493006649_RTM1035_09059" /translation="MSGVSEGARALWIVAPGQAEVRPVTVAPGADEVVIETLYTGISR GTERLVLDGRVPESEHGTMRAPLQEGEFPYPVKYGYCAVGRVTGGAAAGQVVFVLHPH QTRFACPAQMAVPVPEGVPPGRAVLAANMETALNILWDAQIAAGDRVAVVGAGTVGAL VGYLAARVPGTEVTLIDRDAARGPLAEAFGCGFAAPEQAVGRADVVIHATASAAGLAT AIRLAGIEARVVEASWYGSGDIPVALGGAFHQRRLQVVSSQVGRIPASHAARWDYRRR MEVALRLLADPVLDALISGETRFDDLPRAYAGILAAAGTLCHRVRYGD" gene complement(1861157..1861975) /locus_tag="RTM1035_09064" CDS complement(1861157..1861975) /locus_tag="RTM1035_09064" /note="COG1985 Pyrimidine reductase, riboflavin biosynthesis" /codon_start=1 /transl_table=11 /product="bifunctional deaminase-reductase-like protein" /protein_id="jcventer:1101493006649_RTM1035_09064" /db_xref="CDD:32168" /translation="MQSADVTPKVWEHILAARAGQACLCCGDWAPGERAAMALYGSMM AAPGTPQVVAQIGQSLDGRVATVTGDAADVSGPDGLAHLHRMRALVDAVIVGVKTALH DNPRLTVRLVSGQNPARVVIDPSGRLPNDARLFAEDGTRRIVIQEVDKPRPAGVEVIQ LPRSDWISPPAIVSALRKVGLHHLMVEGGAITIARFIEADLLARLHVAVAPLLIGAGP QGLTTRPVARLAQARRPETQVYGLGTDVLFDCVMGARVAAEVWPHARQPAVRLG" gene complement(1862086..1862859) /locus_tag="RTM1035_09069" CDS complement(1862086..1862859) /locus_tag="RTM1035_09069" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09069" /translation="MGFAPEWLALREPADRAARDAALLARAVALADGAVLDLGCGTGS TLRAFAGERATGAGWRLFDHDADLLARAAAWHPEAVIHQGDLARVEDLPLEGVGMVTA SALFDLVSRAWVERFAARLAGAGTALYAALSYDGVMRWHPEDPDDAIVTTRFNAHQRG DKGFGPALGPEAAKVMAAVFEALGYEVHYAPSPWRLGPQDAEMQHLLLAGIAQAAGEA GFAGAEAWHGRRAQVLADGWAEIGHIDLLALPPGLVQRA" gene complement(1862861..1863256) /locus_tag="RTM1035_09074" CDS complement(1862861..1863256) /locus_tag="RTM1035_09074" /note="COG0720 6-pyruvoyl-tetrahydropterin synthase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09074" /db_xref="CDD:31064" /translation="MFAVEVRDHIMIAHSLPNPVFGPAQGVHGATFVVDAAFYTEDID AHGLVVDIGLASDALARVLAPLRYGNLDDKPEFKGKFTTTEFLCHHIWTGLRDIARSE GLGDAGRLRRIRVKLHESHMARGWYEADI" gene 1863460..1865211 /locus_tag="RTM1035_09079" CDS 1863460..1865211 /locus_tag="RTM1035_09079" /EC_number="2.4.1.-" /note="COG2943 Membrane glycosyltransferase" /codon_start=1 /transl_table=11 /product="glucosyltransferase MdoH" /protein_id="jcventer:1101493006649_RTM1035_09079" /db_xref="CDD:32766" /translation="MTPLAPRLRRAPALATRRRLVLALNVVTVAALFSAMLALFLPLG ITWAEGAMLTAFLLTLPWLSIGLWNSILGLLLDLRHGAGAAAHVTPALSRIRGDEAIT ARVAVVMPLRNEDPDASIARLRRLEEEIACSPYAGRFSYHVLSDTDDAHVALKEEARI AQWRSARPTAAIHYRRRTDNTGYKAGNIAEFLHSPEGASDLFLPLDADSEMGADTVFR LIRVMQVSPEIGMLQSLVTGLPARSLFTRAFQFGMRHGMRSYTLGSAWWQGDCGPNWG HNIVIRTTPFREQCMLPVLKGRGPLSGAILSHDQVEAVLMRRAGYEVRVLAEESESYE ENPPSLVDFIRRELRWMNGNMQYFKLLSMPGLKPVSRLQLGLAILMYISAPAWIAFIL IGAALAGTADQINAIPAAAGLTLFAVLMTLSLSPKLMGLAQVLCSSPRSAAYGGRARV LLGGLAEIVFSMLTSPVVAVALTQFAIGLVFGQRIGWSAQQRSRDRLEWHEAARVLWP QTLLGGALCLWFWIQAPWALIFGAPVLLALLLSIPVAVLSTLPRPSRWSQATGLFDIP EDRRPALQSAPLHANTA" gene 1865227..1865829 /locus_tag="RTM1035_09084" CDS 1865227..1865829 /locus_tag="RTM1035_09084" /note="COG2353 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="YceI" /protein_id="jcventer:1101493006649_RTM1035_09084" /db_xref="CDD:44177" /translation="MTAFRLTAFGTTLCTTLALGLAHPAQAAPATWTIDPEHTVVAFT IMHAGYAKVLGRFSDIEGSFVYDPETQELGEVTARIGAASVNTDHEKRDEHVRSPDFL DAGGHPMITFTATDSTPTSETTGTVTGDLTIRGVTQPVTLDVTLNKRAVYPCCHGKET LGISATAEILRSDFGSTYALPEFVGDAVGIILEFEAIRAD" gene 1865943..1867193 /locus_tag="RTM1035_09089" CDS 1865943..1867193 /locus_tag="RTM1035_09089" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, beta subunit family protein" /protein_id="jcventer:1101493006649_RTM1035_09089" /db_xref="CDD:31009" /translation="MRYSGFKVIKEALTGHRGWGPAWRDAAPQASYDYVIIGGGGHGL ATAYYLAKEFKQARIAVLEKGWIGGGNVGRNTTIIRSNYLLDGNEPFYEFSLKLWEGL EQDLNYNAMVSQRGILNLIHTDAQRDAFIRRGNAMMLNGADADLLSTAQIVARYPFLN VNDARFPIKGGLAQHRGGTVRHDAVAWGYARAADQRGVDIIQNCEVTGFRIENGTCLG VETSRGFIGAKKVGACVAGSSSRLMSHAGMRLPIESHVLQAFVSEGLKPVLPGVITFG AGHFYCSQSDKGGLVFGGDIDGYNSYAQRGNLPVVEDVCEGGMAIFPMIGRARLLRMW GGIMDMSMDGSPIIDHTHIKGLYFNGGWCYGGFKATPASGFVYAHLLATDTPHPTATA YRFDRFAKGLMIDEKGMGNQPNLH" gene 1867207..1867494 /locus_tag="RTM1035_09094" CDS 1867207..1867494 /locus_tag="RTM1035_09094" /note="COG4311 Sarcosine oxidase delta subunit" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, delta subunit family protein" /protein_id="jcventer:1101493006649_RTM1035_09094" /db_xref="CDD:44180" /translation="MLINHPLLGPRDASEFVYKGDAALINRPDPDAPDALAQFIDYGY LRDNPAGAHRELWFHEQGDRSWLVVTRNTLTHEITAVELARDVARREGRSK" gene 1867491..1870445 /locus_tag="RTM1035_09099" CDS 1867491..1870445 /locus_tag="RTM1035_09099" /note="COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, alpha subunit family protein" /protein_id="jcventer:1101493006649_RTM1035_09099" /db_xref="CDD:30753" /translation="MTQVNRLKGGLIDQSRAISFRFDDKWMKGHPGDTLASALLANGV RLMGRSFKYHRPRGPLSAGSEEPNAIVELRDGARREPNTRATTAELFDGLTAQSQNRW PSLAFDALSINDRLSSFFAAGFYYKTFMWPAAFWEKLYEPIIRRAAGLGSLSLQADPD SYDKGYLHCDLLIIGAGPAGLAAALTAGESGLNVILADEDSLPGGRLNAETFAMGQQP GHDWAAETAERLAALPNVRLMTRTTVLGAFDHGIYGALERVSDHLPVPPEGKPRQILW RIYSTRAILAAGATERPIVFENNDRPGIMMAGALRAYANRWATTPAQEIAVFTNNDDG HRTARDLLAKGVTVTAVIDTRPDAPKGTGYEVIAGGTITNTSGRLGLTKVEVTDARGN RRSVTCGALGVSGGWNPNVSLTCHQRGRPTWNADIHAFVPGGTLPQGMVVAGAANGLF STHAALTSGADIAAQIAADLGHTATRPDLPQAEDTPLAITPFWHVQGAKRAWVDQQND VTAKDIKLAHQENFTSVEHLKRYTTLGMATDQGKTSNTAGMAIMAEVAGKSIPEVGTT MFRPPYTPTAIGAFAGRARGKDFRPTRKTPSHFWAEEQGAVFVEVGMWLRAQWFPRAG ETHWRQSVDREVLQTRASVGICDVTTLGKIDVQGADAAAFLNKIYCNAFAKLPVGRVR YGLMLREDGIAMDDGTAARLAEDHFVVTTTTANAVTVYRHMEFVRQCLCPDMDVQLIS TTEAWAQFSVAGPNARKLLQKVVDPEFDLSNDGFPFMACGEITVCGGLPARLFRISFS GELAYEIAVPTRYGDAMIRRLMEAGREFDVVAYGTEALGVMRIEKGHAAGNELNGTTT ALNLGMGKMVSANKDSIGAVLSRRDGLNAPDALRLVGLRPVDRSKPVPAGAHLMTKGS PVDAAHDQGYVTSACYSPNLGHSIALAFLKSGDTRMGETLRLVSPLTGVEHDVEVVSA HFVDPEGERLRA" gene 1870438..1870998 /locus_tag="RTM1035_09104" CDS 1870438..1870998 /locus_tag="RTM1035_09104" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, gamma subunit family protein" /protein_id="jcventer:1101493006649_RTM1035_09104" /db_xref="CDD:34221" /translation="MHDLIAITPLGATRPRIDSHGPVTLTEVTDRALASVAARFGHEA QTSALIAALIGTPAPGPARMGGDTLTAFWMGPDQWMLSAPIETHEDLAKQVKAQAKGA ASVTDQTGAWCRFDLSGDGLADVLERLTNANTRAFTGGEAQRAAVEHMGCFLLCHSPR HISVIGPRSSAGSLHHALLTAIRSAH" gene complement(1871188..1872330) /locus_tag="RTM1035_09109" CDS complement(1871188..1872330) /locus_tag="RTM1035_09109" /note="COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases" /codon_start=1 /transl_table=11 /product="Cystathionine gamma-synthase" /protein_id="jcventer:1101493006649_RTM1035_09109" /db_xref="CDD:41121" /translation="MKNEPLKPATIAAQAAGAKDSATAGVVPGISLATTYTRGADYAL LRPDNIYGRDQNDTVRQAEEVIRQLEGAAATLLFPSGMAAVAAVFRALPSGARVVMQN GIYWGTLKWVRAYCVRRAILLDEIDAADPAALAAACRSSADMVWIETPSNPWLKTVEI ATAAGMAHKAGALLVVDGTAATPVLTRALDLGADIVMHSGTKALNGHSDVLAGVLSCR EPGNPMWQEIATDRHDAGAVMGPFEAWLLMRGMRTLPLRMERMCENALAVARYLEEHP KVETVFYPGLASHAGHAIATRQMCGGYGYLLSAVVAGGRERALEVAGRLQLFQRATSL GGVESLVEHRHTIEPHTGIPEGLLRFSVGIEDAGDLMADLAQALEG" gene complement(1872327..1873079) /locus_tag="RTM1035_09114" CDS complement(1872327..1873079) /locus_tag="RTM1035_09114" /note="COG3473 Maleate cis-trans isomerase" /codon_start=1 /transl_table=11 /product="Asp/Glu/Hydantoin racemase family protein" /protein_id="jcventer:1101493006649_RTM1035_09114" /db_xref="CDD:33276" /translation="MQYDLDEGAGAGLRLGMIMLSTDETVEYEARMVLAGRDVNLMHA RIPAKADVTPEDLASMAPEMTRTAALLPRDLRAVAYACTSGATIIGSDEVARLINLAH PGVPVTNPLSAVIAALHRLQVRRIAMVTPYVREVSGPMAAALGAAGIEVIHSVSFGQK EDWTVARIAETSTRRAMLEAGRVPGVEAVFASCTNLRTYGVIDAVEAELGLPVVTSNQ ALFWDMLRRAGAGALGWGPGRLFTMDYGKIDA" gene complement(1873079..1874179) /gene="anmK" /locus_tag="RTM1035_09119" CDS complement(1873079..1874179) /gene="anmK" /locus_tag="RTM1035_09119" /note="COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases" /codon_start=1 /transl_table=11 /product="anhydro-N-acetylmuramic acid kinase" /protein_id="jcventer:1101493006649_RTM1035_09119" /db_xref="CDD:32524" /translation="MLKAERLWALGAMSGTSLDGVDAAMVETDGAAIYAFGPSAYRAY SAEEQTVLAAALGKWPGEDLAEAQALVESAHLEVLSRFDGAALVGFHGQTLAHEPRGR GTHQLGDGARLAEGLGLPVVWDFRSADVRLGGEGAPLAPFFHFACAKWIGATEPLAFL NLGGVGNITWVDPSFARPEEAGAVLAFDTGPANAPINDLMLARRGEAFDRDGALARQG EVAQGALELFLDEPYFLRMPPKSLDRDTFADMIGLVGELGDADAVATLTGMAAAAVLR GMEHCPRPPVRLLVTGGGRHNRVMMQMLRAALDCPVEPVEAVGLDGDMLEAQAFAYLA VRVARGLPTSCASTTGVRAAVSGGTISRVEGV" gene 1874243..1875496 /locus_tag="RTM1035_09124" CDS 1874243..1875496 /locus_tag="RTM1035_09124" /note="COG0162 Tyrosyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="tyrosyl-tRNA synthetase" /protein_id="jcventer:1101493006649_RTM1035_09124" /db_xref="CDD:30511" /translation="MTYRPKSEFLNVMMSRGYLADCTDYQGLDEALSAGTVTAYIGYD ATAKSLHVGHLLNIMMLRWLQKTGHRPITLMGGGTTKVGDPSFRSDERPLLSPAQIDD NIAGMNRVFARYLAYGEGPQDAMMLNNAEWLDGLNYLEFLRDIGRHFSVNRMLSFESV KSRLDREQSLSFLEFNYMILQAYDFLELNRRHGCVLQMGGSDQWGNIINGIDLTRRVI DHEVFGLTSPLLTTSDGRKMGKSAGGAVWLSGDMLSPYEFWQFWRNTTDADTGRFLKL YTELPVEECDRLGALEGSDINAAKIILANAVTTLLHGPEAAAAAEATAREVFEHGGVG DDLPTVEVTADELAEGISIVQLIVRAGLAKSGKEAKRLITENGARLDDEPLTDAGLMI DAAALTSPIKLSAGKKRHALVKLSD" gene complement(1875558..1876676) /locus_tag="RTM1035_09129" CDS complement(1875558..1876676) /locus_tag="RTM1035_09129" /note="COG0337 3-dehydroquinate synthetase" /codon_start=1 /transl_table=11 /product="3-dehydroquinate synthase" /protein_id="jcventer:1101493006649_RTM1035_09129" /db_xref="CDD:30685" /translation="MTEIVHVGLPGREYDIHIGPGLLGQSGALIAPLLRRPRVAIVTD ETVGPLHLATLCNGLEKNGISSVSLTLPAGEATKSWPHFERVVEWLLEEKVERNDVVV AFGGGVIGDLVGFAAAVLRRGVRFVQVPTSLLAQVDSSVGGKTGINAPQGKNLIGAFH QPSLVLADIEVLGTLTERDYLAGYGEVAKYGLLGDSEFFQWLEGNASRAAAGDMAARL YLVTRSVEMKAEIVTRDETEQGDRALLNLGHTFCHALESATQYDGSRLLHGEGVAIGC ALAFEVSARLGLCSQEDPSRVRAHLRDMKMKVDLSDIAGDLPDADGLIALMGQDKKVV DGKLRFILARGIGEAFITSDVPPDVVRDVLREALRGPG" gene complement(1876673..1877254) /locus_tag="RTM1035_09134" CDS complement(1876673..1877254) /locus_tag="RTM1035_09134" /note="COG0703 Shikimate kinase" /codon_start=1 /transl_table=11 /product="shikimate kinase" /protein_id="jcventer:1101493006649_RTM1035_09134" /db_xref="CDD:31047" /translation="MGKGAPKVSGKGHWTLGKTVVLVGMMGAGKTAVGKALAARIGVP FLDSDAEIEKAANMAISEIFQRDGETFFRARETEVIDRLLDGPRAILSTGGGAFLAER NRDLVARKGVSVWLDADLPLLWSRVKGKNTRPLLRTAHPYETLADIYNARVPIYELAE IRVRARPEYSVEAMAEQVLNALSARTDVLEWVE" gene 1877345..1877494 /locus_tag="RTM1035_09139" CDS 1877345..1877494 /locus_tag="RTM1035_09139" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09139" /translation="MLRLIKWLIYLAILGFIALVAYAYIGPFFGADFSPDQTEIRQDI ILETD" gene 1877514..1879013 /locus_tag="RTM1035_09144" CDS 1877514..1879013 /locus_tag="RTM1035_09144" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09144" /translation="MTTTGAALAQQPLSAIEWLDEASTAAVTTVPRPSFSEPPSANTV TVPNVTVTALDAPRADAVGLLPSTTTGLPVTLWEKSTTSTLLRALSHLESEPLPAIQA LYYTLLLAEANAPLDAGSDAAFLQARLKALRSFGAIEPAQAMAERAGPMTKSLFDQWF DLSLLLGQEDPACAMLSRKPRLTSDIGARIYCAARSGDWNTAALTYHSATALGTLSET DATLLALYLDPELIEETEPPEPPQSLTALQFRLFEAIGTALPTHNLPRAFAMADLRGN SGWKAEIEAAERLARTGAVPASRLLGLYTDRRPAASGGVWDRVAAIQALDQALSEGAS QDLVEALPRAWRAARDQRLEVIFAELFAERLDAAEIPQNIASQVFEIMLLSEQYETAS ARLSSPSSDQQFLIDTARGAPSAEAARTSLQSAIAAGFANSAPPADHQALIDAGRLGE AILAAARQIGHGDRARDALPGAIATLRTLGLEDTARRAALQLLLLDPRG" gene 1879010..1879981 /locus_tag="RTM1035_09149" CDS 1879010..1879981 /locus_tag="RTM1035_09149" /note="COG4974 Site-specific recombinase XerD" /codon_start=1 /transl_table=11 /product="tyrosine recombinase XerD" /protein_id="jcventer:1101493006649_RTM1035_09149" /db_xref="CDD:34580" /translation="MTEAARWIDLFLEAQAAELGAAKNTLLAYARDLKDFSEWVENQG LALQTLTQPDIDRYLVFCDAQGLARATRARRLSAIRQLYRFAFDERLRADNPAIRIKG PGKAQRLPKTLSEEEVSRLLDMAPAHGRTASERSRNACLVALLYATGMRVSELVSLPL GAARGDPRMILVRGKGGKERMVPLSPPARAALSDWLAIRDAEESARRAKGVQSSPYLF ASGGASGHLTRHRFYNLIKEISVKAHVDPDKVTPHTLRHAFATHLLANGADLRVIQTL LGHADVATTEIYTHVLEARLQALVQEHHPLAQAARRKTGGKTSSDGQ" gene complement(1879918..1880586) /locus_tag="RTM1035_09154" CDS complement(1879918..1880586) /locus_tag="RTM1035_09154" /note="COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases" /codon_start=1 /transl_table=11 /product="Diadenosine tetraphosphatase and related serine/threonine protein phosphatase" /protein_id="jcventer:1101493006649_RTM1035_09154" /db_xref="CDD:30967" /translation="MAYCANPAETVALIRAAECPVLAGNCERQLARNELDCGCGFGAG TQCDLLSAGWYRHADRFSGAADRGWMETLPDLILFTHAGRRAAVIHGGLRDVSRFVWP VSDEAVFLEEISHIQEVAGHIDYVFSGHSGVMFQRRIGAVDWINAGAIGMPPHDGRVE TGFAVLDAHVTFHRLAYDYLGAQAAMRAAGLVQGYDTALTTGYWPSEEVLPPVLRRAA CANG" gene 1880804..1882111 /locus_tag="RTM1035_09159" CDS 1880804..1882111 /locus_tag="RTM1035_09159" /note="COG4536 Putative Mg2+ and Co2+ transporter CorB" /codon_start=1 /transl_table=11 /product="CBS domain protein" /protein_id="jcventer:1101493006649_RTM1035_09159" /db_xref="CDD:34183" /translation="MEAASSATDLTFWITCGAIVTLLVMSAYFSGSETALTAASRGKL RAQAEKGSRGAETALRITEDNERLIGSVLLGNNMVNILAASLATALFTRLFGESGVAL ATLVMTLLVLVFAEVLPKTYAITNAEAAAARTAPIIVWVIKIFSPIVTAVRWFVRRVL ALFGVQTDPDSHILAVREEIAGALYLGQSEGVVEKEDRDRILGALDLGERAVEEIMLH RSRIEMIDAEAEPDAILDQCLKSNHTRLPLYRDDPDNIIGVVHAKDLLRAMHKLVTES QDGAAALKNFDVCSIARKPYFVPETTTLDDQMRQFLRMRSHFAMVVDEYGTLQGLITL EDILEEIVGEITDEFDPDAEHPVRRTEDNQFLVDGAMTIRDLNRANDWNLPDEAANTV AGLVIHEAQMIPKVDQVFIFHGFRFQVMARKDNRITRLKVRKL" gene complement(1882121..1882699) /locus_tag="RTM1035_09164" CDS complement(1882121..1882699) /locus_tag="RTM1035_09164" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09164" /translation="MMPQASPFDWSASPVAEQIEYLRGLAPESFHQALIEYDWALAPE PVLGWAMAQRGIDLCTALSVFFNGDPGRFNYMPKPHVPEPYRGVARVLDNICLRVNSG FYLIYPGKLPCCQHRLSKWLSYQQADRDEGRRGRWMLDERILEPMLQDDLRLPRDQAP VNKPRPSLWRDLLSPLIGLGVDRDVLKYKDRL" gene 1882727..1882831 /locus_tag="RTM1035_09169" CDS 1882727..1882831 /locus_tag="RTM1035_09169" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09169" /translation="MRYLCAPKVRFLRNNCDAIWAAHKNLLGARCFGA" gene 1882841..1883278 /locus_tag="RTM1035_09174" CDS 1882841..1883278 /locus_tag="RTM1035_09174" /note="COG4103 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09174" /db_xref="CDD:46933" /translation="MLNRLLHSFSASKPGPLPEPDEKLALAALMVRVAKSDHHYELAE IKRIDRLLARIYGLGPVEAAKMRAVSERIEHAAPDTDRFGHIIRETVSLEARLGALEA LWEVVLSDGASQPEELQVIDAAREAMGLSHADSDAARALAEAQ" gene 1883300..1883761 /locus_tag="RTM1035_09179" CDS 1883300..1883761 /locus_tag="RTM1035_09179" /note="COG4103 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09179" /db_xref="CDD:46933" /translation="MAPYTYGMFADFLKRLIQPAPEPLTGGDARLALCALLVRVARTD GDYSAAEIIRITRIISARYDLPQSEAEALRQEAETLESEAPDTVRFTRAIKDAVPHED RLGVIEALWQVALADGVREADEDALLRLVASLLGITDQESARARQRVMGST" gene 1883776..1884513 /locus_tag="RTM1035_09184" CDS 1883776..1884513 /locus_tag="RTM1035_09184" /note="COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09184" /db_xref="CDD:33034" /translation="MYDRPETAACNDALWNAMRAALGDGPETLTRDGNLWDHWRSPDL LLSQTCGYPYRARLHGHVTLVASPVLDLPSCPPGYYHSVFVARADDPRTHPEAFATAR LAYNDGLSQSGWAAPQNWAAARGFSFTTPVHTGAHRASAMAVAEGRADIAALDVLSWH LMQAHDPFTTGLRELAHTDPTPALPYITALGRDADALRDALEAAIMALPAAARATLGL KGVTYIAAEDYLAPPNPAPPPPLTPPN" gene 1884637..1885413 /locus_tag="RTM1035_09189" CDS 1884637..1885413 /locus_tag="RTM1035_09189" /note="COG4598 ABC-type histidine transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter related protein" /protein_id="jcventer:1101493006649_RTM1035_09189" /db_xref="CDD:34233" /translation="MSDTPPVIEIRNLHKAYGALEVIKGVDIAAHRGDVVSLIGSSGS GKSTILRCANLLEDSQQGDILFKGEPVQWKGAGLARHPADPKQVLRIRTNLSMVFQQF NLWAHLTILQNVMEAPVTVLGRDRHEVEAAARKYLDKVGIGDKCDVYPAQLSGGQQQR AAIARALCMEPEALLFDEPTSALDPELEQEVIRVIKDLANEGRTMMIVTHDMKMAADV SDHVVFLHQGLIEEQGPPDTLFGAPKSTRLQQFLSSTTGG" gene 1885498..1886157 /locus_tag="RTM1035_09194" CDS 1885498..1886157 /locus_tag="RTM1035_09194" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="His/Glu/Gln/Arg/opine family ABC transporter, periplasmic His/Glu/Gln/Arg/opine family-binding protein" /protein_id="jcventer:1101493006649_RTM1035_09194" /db_xref="CDD:40584" /translation="MADTVRLGTEGAYPPYNFINDKGEVDGFERELGDELCKRAKLTC EWVTNDWDSIIPNLVSGNYDVIIAGMSITEERDQVIDFTQNYTLPDPSAYLAPSADVD VKSGVIAAQSGTIQASYVASSGATLVEYATPEESIAAVRNGEADAVLADRAFLLPVAE EDAGLELLEEMVMIGGGIGLGLRESDTELKGKLDAAIQSMKDDGSLNALIEKWEIGLT F" gene 1886216..1887097 /locus_tag="RTM1035_09199" CDS 1886216..1887097 /locus_tag="RTM1035_09199" /note="COG4215 ABC-type arginine transport system, permease component" /codon_start=1 /transl_table=11 /product="binding-protein-dependent transport systems inner membrane component" /protein_id="jcventer:1101493006649_RTM1035_09199" /db_xref="CDD:33942" /translation="MFAFCSDPANLDGLAWLSCYLTTSKHLQLYYAVGTVLLLLAITA PAALAFGFGGAMAARAHIAPVRWLGKAYIAIVRGVPDIAFFLFFVIALDQAFEWARHQ ILCPDWDQPIRQGNDFVVCQAAKLPLGTAPQWVHETYGFTLAVLTFAIVFGAFAANVL FGAMRAVPRAQMETAEAYGMTRRQAFWRIMVPQMWVYALPGLGNLWMVLIKATPLLFL LGVEDIVYWARELGATANPRFTEYPHGDWRMWYFLGLMVFYLGFTRISEVVLERLMQR LTLGQATTGGEAQRKAA" gene 1887094..1887900 /locus_tag="RTM1035_09204" CDS 1887094..1887900 /locus_tag="RTM1035_09204" /note="COG4160 ABC-type arginine/histidine transport system, permease component" /codon_start=1 /transl_table=11 /product="His/Glu/Gln/Arg/opine family ABC transporter, permease protein" /protein_id="jcventer:1101493006649_RTM1035_09204" /db_xref="CDD:33906" /translation="MSCLETIQAYGLRAIGIGERLLPQSDFTLCQQFTLIGSGLIWNV YFGFFALISGFILATAVALGKGSRNRVIRKLSEWFIFVFRGSPLFIQFFFAYFFFLSL KSVSPFFDILTSAWLGALIVLFLNTAAYSGEIFYGALRSIPKGDVEAADAYGFSGWPR FRRIIWPTMLRLAWPAYTNEAIFLFHATTLVFFSGFPVWQQRGDALYYAKYFADKTFN PFVPYPILAGYFILLTLVVIGVFGLINRRLNRHLPQEYRRKLSLRMNLIR" gene 1887900..1888487 /locus_tag="RTM1035_09209" CDS 1887900..1888487 /locus_tag="RTM1035_09209" /note="COG2068 Uncharacterized MobA-related protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09209" /db_xref="CDD:32251" /translation="MGAVAILVPAAGASSRMRGTDKLLEMVRGQPLLRDRVTLALGTG CDVAVTLPPEGHARRTALKGLDATLLPVPDAATGMSASLRAGATWAMAEGVTALMVLL PDLPDLTADDMKIMLQVNDCEHIFRACDADGTPGHPVILPARLLPDLAQITGDTGARD LLRAHPVTPVPLPRQHATTDLDTPEAWAAWRAAQG" gene complement(1888484..1891129) /locus_tag="RTM1035_09214" CDS complement(1888484..1891129) /locus_tag="RTM1035_09214" /note="COG5373 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="membrane protein-like" /protein_id="jcventer:1101493006649_RTM1035_09214" /db_xref="CDD:34937" /translation="MDALAVVIGLGILALLVIGVPYLLVSHARLKARVARLEAGLGQT TPEVVTETVGAPVVEDRAGPWASASVVAPQTEPTDTPPRAFVLRADRLGALMAWLRAN WALAVAGVSLALAGVFMVQYGVEQGVLTPFWRVMGALALGAALIAAGERLRRRYGDEA AGAVTGLPSVLSGAGVIALFAGVLAARGLYDLIGPGMALAGLIGVGAGAVVLGWFHGP VLTALGLIGAGVAPFLVGGQSDTPGVFYGFYALLAVVGLAVDAARRWAWISVLALMVS MGGATLLYLGEAGALLYLAFWAGLVVLTLLVPEARMIPQHAGNSLLRRVMAGGAYPDF PVRLVWAVVVLASLAALMLARDAGEALVVWGALSLLAGLLAALTLGTRRAEALEDLPL VPALAALVLVTLEGFGKGPVSSGFMAGIERLPESPMPMAASVILAGGAVASVVFAFRA RYAAGTVPVILWSLGAAVMAPGLALILELLWTPAMVIGAYGWALQVMALAGLMVVFAV RARGSEARLVAAVFAGAALVLITLALFVMLSQAALTLALGVMVLATALIDRRFNLPLL GGVAQVGVAVIGYRLVIDPGLSWAVREAGLGDVLLSHLGPLILLGAAWFVMAARAGGT TRVVIESAVWSITAIVLSVLLQRWLGGPGAMGHAGLGLTAVVWLASAMVQLWRLRAGG RVVRWLRLALAAAMGAVALVTLVAQALLTNPLVPVLWRKEFVSGPLILDTLAAAYLPV ALVFALAAWKLDHLPRLLRQVFVVAGAGYGAWYLGLEIRRLWQGDDLSVPGVSDGELY SYTVALILVSVLLLILALLQRSETLRRVAMAGVALTVAKVFLVDMAGLAGLVRVASFL GLGLSLAGLAWLNRRIAEHMGRGAA" gene complement(1891133..1892134) /locus_tag="RTM1035_09219" CDS complement(1891133..1892134) /locus_tag="RTM1035_09219" /note="COG3768 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09219" /db_xref="CDD:45030" /translation="MSVDKAKGPVLIEMEERAAEGPDRAPPVPDLVERPDGRAMRAVI TRGAAGPSWLGRLFWGLALGLMGAALSVAAWDFAVGLIARVPVLGYGVAAMGVGLLLV AAMIGLREMAGFARLGRLDTLRRAAAAALTGGDLEAARAVVARLRALYAARPEAAWGL ERLAEQQADQFDAEALLGLAEAEVLAPLDALALREVETAARQVAMITALVPLALADVV GALVSNLRMIRAVAEIYGGRAGFLGSWRLARAVMAHLLATGAVAVGDDLISSVAGGGV LSKVSRRFGEGLVNGALTARVGVAAIEVCRPLPFQRGRRPSVTGVVRRALTGLFGQG" gene complement(1892131..1892577) /locus_tag="RTM1035_09224" CDS complement(1892131..1892577) /locus_tag="RTM1035_09224" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="acetyltransferase, GNAT family protein" /protein_id="jcventer:1101493006649_RTM1035_09224" /translation="MKTARGRLWHLPRLAMILWAFTRATPWLPRVRSHWDDLRALARV IRWGWVRVIREQGRVAGFLVRDGDILHALYVHPVLRGQGFGRALLAEAKAEAGVLRLW VVEANAAARAFYARQGFVEAARSAGLGNDEGLPDILMVWRGEGVSA" gene complement(1892574..1893986) /locus_tag="RTM1035_09229" CDS complement(1892574..1893986) /locus_tag="RTM1035_09229" /note="COG3106 Predicted ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09229" /db_xref="CDD:44230" /translation="MAIAGLADGVVRSIEGLGDRVGQALFEPVIRVGVTGLARAGKTV FITSLIANLMDRGRMPGLLAQGEGRILAAYLQPQPDVTLPRFDYESHLAALTGPEPHW PESTRTVSELRLSLRVRPAGLLSGVTGPRVIHLDIVDYPGEWLLDLALLDKSYEEWAA EVLARIGARSEAAAYLAQVTEVDTAAPLDEPLAQALAAGFTAYLHAARAAGFYDCTPG RFILPGDLAGSPVVTFAPLPEGKAGRGSLRAEMARRYDAYKREVVKPFFRDHFAKIDR QVVLVDALDAIHKGPQAVEDMRRAMADILSAFRPGRNAFLTQLFLGRRVERILFAATK ADHLHHAQHGRLTGIMAALLREARDRAEFAGATTQAMALAALRATVEERVSHNGEMLD CVRGRLLETGRQAAFYAGDLPDDPGQLLAPARAGAKEWLGRDYQVMRFAPAPLNLRPG EGPPHIRLDRAAQFLLGDKL" gene 1894185..1894805 /locus_tag="RTM1035_09234" CDS 1894185..1894805 /locus_tag="RTM1035_09234" /note="COG0352 Thiamine monophosphate synthase" /codon_start=1 /transl_table=11 /product="thiamine-phosphate pyrophosphorylase, putative" /protein_id="jcventer:1101493006649_RTM1035_09234" /db_xref="CDD:30701" /translation="MAETEQPQIYLITPPEFELSVFPDTLARVLDSHPVACVRLALAS RDEDRIARAADACREVTHARDVALVIESHLMLVERHGLDGVHLPDAGRSVRAARKELG EDAIVGCFCGTSRHDGMNAGEAGADYISFGPVGATPLDDGAQVDMDVFDWWSKVIELP VVAEGALDLALVAQLTPMADFLAFGEEIWREEDPVAALGRFIAAMG" gene complement(1894812..1895624) /locus_tag="RTM1035_09239" CDS complement(1894812..1895624) /locus_tag="RTM1035_09239" /note="COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase" /codon_start=1 /transl_table=11 /product="acyltransferase, putative" /protein_id="jcventer:1101493006649_RTM1035_09239" /db_xref="CDD:30553" /translation="MPPPEFTLTPGGWLRVGLRGLGMALVILVGVVFAVALRLVERPL YGVHRPWTPYVTQWVCWAVFRVLGMRHEVVGTPMHVPGAVVANHVSWLDIFALNACKR VYFVSKSEVAGWPGIGHLARLVGTVFITRDPKEAKAQTEIFEERLLAGHKLLFFPEGS STDGMRVIPFKSTLFQAFFSKRLEHSIHVQPVSVIYQAPVGQDARFYGWWGDMDFGTH LLRVLAVRPQGRVRVVYHAPARVDSFADRKALAAWAEAQVRSGMPEARRGQE" gene complement(1895645..1896412) /locus_tag="RTM1035_09244" CDS complement(1895645..1896412) /locus_tag="RTM1035_09244" /note="COG3176 Putative hemolysin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09244" /db_xref="CDD:32989" /translation="MIASAPKFRVKLADTPEELRAAQRLRYEVFVEELGGDGPLVDHA ARLERDRFDPFFDHLLLLDDANNAAVVGVYRLLRDDLAARAGQFYSEDEYDLSALKTS GRRLMELGRSCLAKSYRGGPGMYHLWNGLGRYVTDHGIEILFGVASFHGTDIAHLAPS LSFLHQRHLAPETLRVRAREGHFQRMDLIAARDLDRRAAMRQVPALIKAYLRLGGYVG DGAFVDHQFNTTDVCLILDTDRLSEKQKNIYQQSITS" gene complement(1896521..1896703) /locus_tag="RTM1035_09249" CDS complement(1896521..1896703) /locus_tag="RTM1035_09249" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09249" /translation="MTDMNSILEPGMLVLHPHRPDWGTGQVQSNIGGRITVNFREEGK VVIDGNRVELIPLLDP" gene 1896730..1897329 /locus_tag="RTM1035_09254" CDS 1896730..1897329 /locus_tag="RTM1035_09254" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09254" /db_xref="CDD:34947" /translation="MPQHTHALGALIASRICHDLVSPLGAIGNGLELMGLSGTMEGPE MALIAASAAQALARVRLFRLAFGQAEDDHVTRAEELRDILGTLHAGGRITLTLQITAP LPRPMAQILLLGLLCVEQALPQGGQLAVSQTPGGWQIVATAARLAPDVDLWRALCAEG PWPRPTPAQVHFQLLHHCLAAQGATLQRQLTDTEFRVTL" gene complement(1897319..1898584) /locus_tag="RTM1035_09259" CDS complement(1897319..1898584) /locus_tag="RTM1035_09259" /note="COG0014 Gamma-glutamyl phosphate reductase" /codon_start=1 /transl_table=11 /product="gamma-glutamyl phosphate reductase" /protein_id="jcventer:1101493006649_RTM1035_09259" /db_xref="CDD:30364" /translation="MKDQTEIAALMAEIGARARAASADLAIADAASKRAALEAAAEAV WAGRGEILAANARDLDYGRDKGLSHAMMDRLALDEARIQGIVDGLRAVAAQDDPVGEV LAEWDRPTGLHIRRVRTPLGVVGVIYESRPNVTADAGALCVKSGNAVILRGGSESFHS SGAIHACLVAGLRAAGLPEDAIQLVPTRDRAAVEAMLTMTDTIDVIIPRGGKGLVGLV QRDARVPVFAHLEGIVHIYLDAAADAAKALRVVLNAKTRRTGICGAAECLLIHRDIVD TIGRDVIRALIEAGVEVRADAALQGIAGTVPATDEDWGREYLDSIIAVKVVENIDDAI AHIRRYGSNHTECIVTEADAAAARFFARLDSAILMRNASTQFADGGEFGMGAEIGIAT GKMHARGPVGAAQLTSFKYLVEGDGTVRA" gene complement(1898603..1899679) /locus_tag="RTM1035_09264" CDS complement(1898603..1899679) /locus_tag="RTM1035_09264" /EC_number="2.7.2.11" /note="COG0263 Glutamate 5-kinase" /codon_start=1 /transl_table=11 /product="gamma-glutamyl kinase" /protein_id="jcventer:1101493006649_RTM1035_09264" /db_xref="CDD:30612" /translation="MIKIGSALLVDRVGGALRAEWLGALIEDVVWLRQRGTDVILVSS GSIALGRRVLNLPQSVLTLEQSQAAAAVGQIRLAGAYDAALAAHGLTAAQVLVTLEDS TDRRRYLNSRATLEQLLRLGAVPIVNENDTVATDEIRYGDNDRLAAQVAVTAGADQLI LLSDVDGFYTANPAQDPTARRFDTVALITPEIEAMAGDAVSGLSKGGMKTKLLAAKTA TAGGCVMAITQGDVLHPVRALNEGAAATWFLAQGDPQQKRKAWIAAMKPKGRVIVDEG AARALTAGSSLLAAGVTEVSGRFGRGDPVEVADAAGRVLGQGLTRYDAADAERIKRLR SDQIEAVLGYPARGPLMHRDDMAF" gene complement(1899697..1900740) /locus_tag="RTM1035_09269" CDS complement(1899697..1900740) /locus_tag="RTM1035_09269" /note="COG0536 Predicted GTPase" /codon_start=1 /transl_table=11 /product="GTP-binding protein, GTP1/OBG family" /protein_id="jcventer:1101493006649_RTM1035_09269" /db_xref="CDD:30882" /translation="MKFLDLAKVYIRSGGGGAGSVSFRREKFIEFGGPDGGDGGNGGS VWAEAVDGLNTLIDFRYQQHFFARSGTPGMGRQRTGASGDDIVLRVPVGTEILDEDME TVLADMTEIGQRVLLAQGGNGGWGNLHFKTSTNQAPRRANPGQEGIERTIWLRLKLIA DVGLLGLPNAGKSTFLAATSNARPKIADYPFTTLHPNLGVVGVDNVEFVVADIPGLIE GASEGRGLGDLFLGHVERCAVLLHLVDGSSGDLVGDYQTIITELEAYGGGLADKPRVA VLNKIDTLDDEERAFLRDELEAACGTPVMLMSGVSGEGVTEVLRALRERIDADRLRHK VSDEDEEDAPWQP" gene complement(1900776..1901315) /locus_tag="RTM1035_09274" CDS complement(1900776..1901315) /locus_tag="RTM1035_09274" /note="COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins" /codon_start=1 /transl_table=11 /product="acetyltransferase, GNAT family protein" /protein_id="jcventer:1101493006649_RTM1035_09274" /db_xref="CDD:31856" /translation="MKYETIVNQPVMPAERFDLRPLRVSDAGLIGMNAGDERVARFTR SIPHPLPPGATEALITRAQAEDRSEDIWAIDGTKAGGSEVMGLISLERVDDGQSEIAY WVAPAYWNTGVASAAVEALLTANPHRARTIFASVFQDNAASARVLTNCGFQYLGDAEA FSVARGAKVLTWTYSKKMI" gene complement(1901501..1901770) /locus_tag="RTM1035_09279" CDS complement(1901501..1901770) /locus_tag="RTM1035_09279" /note="COG0211 Ribosomal protein L27" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L27" /protein_id="jcventer:1101493006649_RTM1035_09279" /db_xref="CDD:41086" /translation="MAHKKAGGSSRNGRDSDGRRLGVKKYGGEAVISGNILVRQRGNK FWPGLNVGEGKDHTLFAVAEGAVKFHKGLKGRTFVSVLPVAEAAE" gene complement(1901782..1902396) /locus_tag="RTM1035_09284" CDS complement(1901782..1902396) /locus_tag="RTM1035_09284" /note="COG0261 Ribosomal protein L21" /codon_start=1 /transl_table=11 /product="ribosomal protein L21" /protein_id="jcventer:1101493006649_RTM1035_09284" /db_xref="CDD:40906" /translation="MFAVLKTGGKQYKVSSGDILRVEKLAADAGEKVQFNDILMLGGD APVIGAPFVAGAAVQAEVVDQIKGDKVINFVKRRRKHGSQRTRGHRQKLTLLRVTEIL ASGADATGVKAAVGSGSVATVVEAKPAKKSSAKPAAGGDDLKRLSGVGPALEKKLLEA GVTTFAQVAAWTEADVAAMDEKLSFKGRIEREGWIEQAKELAKG" gene complement(1902457..1902552) /locus_tag="RTM1035_09289" CDS complement(1902457..1902552) /locus_tag="RTM1035_09289" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09289" /translation="MEFGISAQPGGMILPGLSLIYTPIGAQFEVA" gene complement(1902596..1903408) /locus_tag="RTM1035_09294" CDS complement(1902596..1903408) /locus_tag="RTM1035_09294" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09294" /translation="MRVRAVLFACAALLLAALPLRAGEVDRLMAALHFEETVAIMRAE GLRYGGDVGDEMLSAVERARWDRVVGRVYDADRMLAQVQSRFAQAMDGADTGALLGFF EGQGAEVVALEIAGRRALLDDGTEAAAEARYAELAAADAPIVRHVATLIADSDLIERN VAGALNANLGFYRGLADGGGLDLSEQEMLAEIWAQEPEMREETRDWLQAYLTMAYQPL PQEVLEAYIALYRSAEGQQLNHALFVAFDAMYEELSYQLGLATALTMQGEDL" gene complement(1903405..1904250) /locus_tag="RTM1035_09299" CDS complement(1903405..1904250) /locus_tag="RTM1035_09299" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09299" /translation="MSEVRLRSPARGVVLTVLAVVMVALIAGPLRAADRARLEAFLEV TGFGVALDSIALSASGAPAMLGLSASDFGQGWSTLADEVFETARMREMGLSILEEAMD DEMLGHAAEFYASDLGQRLVLVENAAHLHEDDDAKRAEGEALLAAMPPERVEVLRAMN AAVDSAGTGVRAVQEIQVRFLLAASYAGVLESEIDETMLRALLAEDEDELRESLRASA LASAAYTYQSLPIEDLRAYVAALEHPIMARVYELMNAVQYEIMANRFEVLAARMRGLT PAQEL" gene 1904384..1904470 /locus_tag="RTM1035_t09482" tRNA 1904384..1904470 /locus_tag="RTM1035_t09482" /product="tRNA-Ser" gene 1904657..1905592 /locus_tag="RTM1035_09304" CDS 1904657..1905592 /locus_tag="RTM1035_09304" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09304" /translation="MPLVTDFETILPKNRLSFTAAGPVLVVSFDNAVAAQRRVPNRRA WGHGFFLQEGHSVLGVMADDTDWFRCPALHASLLALRDRGFFQNFAQVVMTGTSMGGF GAAAFSSLAPGCRVISYTPQSTLHADLVPWETNHGKGRRQRWDGLFNDAAVESRQAAE VYLFYDPFHSEDRRHAARFTGENVRHLRSPLLGHGLPEAFDAMGLLKEVFRKASTGTL DNAWFYSEMRARKTLPKYHKEMLQALARHRHLKTGAAVARRAFETFADPFFAEREALF TAATGNILQAMNQVDRLARAQRLRNRARAETPERD" gene 1905749..1910020 /locus_tag="RTM1035_09309" CDS 1905749..1910020 /locus_tag="RTM1035_09309" /note="COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases" /codon_start=1 /transl_table=11 /product="alkaline phosphatase" /protein_id="jcventer:1101493006649_RTM1035_09309" /db_xref="CDD:31080" /translation="MAYTLQLLHANDLEGGVAALDNAPNFAAIVDTLEDTFENTILLS AGDNYIPGPFFSTAADFSMGATLTAAYERFYTEVLGLDLTGVTLDIDEGPGRVDITIM NVLGFDASAVGNHEFDPGTNAFAGIINASGGNGEINWVGALFPYLSANIDFSGDNSLG RLFTDEILTSDIFAESLADLAARNIGPAIAPATLIEEGGELIGVVGATTQIIETISST GGTNEITGGANNMAALAAVIQPQIDALIAAGANKIILTSHLQQISLEKELAGLLDGVD IIIAGGSNTLQADANDRLRDGDAAAESYPFLTVDANGHPVAIVSTDGEYSYLGRLVVE FDDNGVLMADSIDTAVSGAFATDAQGVLDVTGAATLTEALDASAKASIVQDLTDAVQV IVDEADAIAFGNHDVFLDGRRETVRTEESNLGNLTADANLSAARGADTTVNVSFKNGG GIRAEIGSATNTGTDAGDGVLSQLDLQNSLRFNNGLAVATVTKEGFLMLLEHGVADTD TDAGNTPGRFFQIGGFRVSFDEAGTAQQLVTDANGDYVVDPATDRPQVAVAGDRIKTV ALIDPETGDDIVIFRDGAFTAEAPETIRMVTLDFLMQSNGDGYPFQELISDVQFLTPE GGITSDTEADRLGEQQALGDFMSENFPDEDTAFANAETDVANDLRIVQLARNGGIDRI LLDENTPTLEVSIAANLLSGETELFTGGSEVVSVDAGRAYVTNGAQNRVDVFDATTGE KLFEFDLGQVQGFDGVQSVTAQNGLVAAAISVTPAEANGVVAIFDLEGTLLNTIEVGN LPDMLTFTPDGTRILVANEGEPLDGTDPLGSVSIIDLSGGAANATAVTLDFSAFDGQE DALREVGVLIQPGNSASQDLEPEYITVLPDGVTAWVSLQEANAYAVIDLTTNTVTDIR SFGLVDRSLQGNEIDASNRDNAINLQTYDNLFGMRQPDAITSIEIGGETYIFTANEGD ARDATEARIGSLDLDPTAFPNADILQLNENLGRLNVRTDLGDTDGDGDYDQLFHYGAR SFTIYNAAGEIVFDSGSQFSQLIAEIRPELFNQDEGECDNRSDDKGVEPEAIAVGVVE GKPYVFIGLERDSGIMVFDISDPANPVFDSYIDSEANGNISPETIAFIPAEQSATGFA QIAIAYEGDGNTAIYNLDNLGVDSSPTGRSDGDDTLVGTDGDDVFGAGAGDDLVNGGA GNDNLGGGFGNDTVNGGAGNDTIGAGLGDDIVNGGAGNDVANGGAGNDLVRGEDGNDR LGGGQGADTVEGGTGDDFIGGGAGTDLLDGGEGNDSLGGGLGDDTVLGGAGDDFVAGG GRDDVLDGGAGNDTLNGGSGNDLMTGGEGVDTFVFNTLTSGEADIITDFDASTETVIL RSVASFDTLDITDTVAGAVVAVDGQTITFEAVLAADLTADNFLFG" gene complement(1910162..1912573) /locus_tag="RTM1035_09314" CDS complement(1910162..1912573) /locus_tag="RTM1035_09314" /note="COG0466 ATP-dependent Lon protease, bacterial type" /codon_start=1 /transl_table=11 /product="ATP-dependent protease La" /protein_id="jcventer:1101493006649_RTM1035_09314" /db_xref="CDD:30814" /translation="MQDTLNASYPVLPLRDIVVFPHMIVPLFVGREKSVRALEEVMAD DKQILLSSQIDPADDDPAESGIYRVGVLANVLQLLKLPDGTVKVLVEGVARVRITEYL ANSEFFEAKAEYLSEIPGDATTIAALLRTVGDEFARYAKVKKNIPDEAMAAVTESEEP AKLADLVAGHLGLDVGRKQELLETLSVSERLEKVYGLMQGEMSVLQVEKKIKTRVKSQ MERTQREYYLNEQMKAIQKELGDGEDGAGEIAELEERIAKTKLSKEAAEKAEAELKKL KSMSPMSAEATVVRNYLDWMLSIPWGVKSRTKKDLHKAQDILDADHYGLDKVKERIVE YLAVQQRSQKLKGPIMCLVGPPGVGKTSLGKSVARATGREFIRISLGGVRDESEIRGH RRTYIGSMPGKIIQALKKAKTTNPLILLDEIDKMGQDFRGDPASAMLEVLDPEQNSTF VDHYLEVEYDLSNVMFLTTANSYNMPGPLLDRMEIIPLAGYTEDEKREIAKQHLVDKQ VKNNGLKKGEFALTDAALTDVIRYYTREAGVRNLEREIAKLARKAVTRIIKGTDKAIT ITPENLDDFLGVRKYKFGLAEESDQVGVVTGLAYTSVGGELLNIEALRLPGKGRMKTT GKLGDVMKESIDAASSYVRSVAPDLGIKPPKFEKWDIHVHVPEGATPKDGPSAGLAMV TSIVSVLTGIPIRKDIAMTGEVTLRGNALPIGGLKEKLLAALRGGIKTVLIPRENEKD LAEIPDNVKEGLDIIPVDHVRDVLKLALVRAPEPVEWDEEAEEAAAAEAALKSGEEGR GAVAH" gene complement(1912760..1914001) /locus_tag="RTM1035_09319" CDS complement(1912760..1914001) /locus_tag="RTM1035_09319" /note="COG2202 FOG: PAS/PAC domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09319" /db_xref="CDD:29035" /translation="MHADAARSGPRADKTLVDQEVPFRADELFFSRTDTRGVIRAFNP VFARVGGYSAEELVGAPHKLVRHPDMPKGVFWLMWEGLKRGHSVGAYVKNRAKDGRFY WVFAVVSPVDGGYLSVRLKPTSALFTTVKEVYARALGRERERSLTPEQSAAAIEADLI DAGFANYGVFQIEALRREHASREGARKRAVTPALAASGHLFDVKREIEQELRVLCVNL KEAELITTNMKIQACKLKSDRGPINEIAKNYEMMMRDIRNHPRVIQTLRDDQGTWDVA DEAKSVFMIAVADLMEEMVTFFTQEAERENHLGATAEMEVVAGLRDRYRIEADRAMQD GYRAVRQLSADAEMIRRMVTGLAMVRVVLRVEAGILRERLSGLQSILGQLDRFHDEVS AALERVQDAVTSLMRDRSLAA" gene complement(1914227..1915303) /locus_tag="RTM1035_09324" CDS complement(1914227..1915303) /locus_tag="RTM1035_09324" /note="COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family" /codon_start=1 /transl_table=11 /product="NADH-dependent flavin oxidoreductase, Oye family protein" /protein_id="jcventer:1101493006649_RTM1035_09324" /db_xref="CDD:28798" /translation="MSHKLFSRTKAGDLDLSNRVVMAPLTRNRADNDTGEVGALHVEY YAQRAGAGLIITEAAQISPEGKGYVGTPGIYSPGQVAAWKKVTEAVHAKGGKIVIQLW HVGRISHTSLQPDAQAPVAPVAVAAKAQTVTTAGFEDTSTPRALRADEMPRLVADYVH AAKAAKEAGFDGIELHAANGYLLDQFLKDGPNTREDAYGGSVGNRARLLFEVLDGLET VWAPGEIGIRLSPWSGFNDATDSDPDTSFGWVVEQLNRRGLAYLHLIEGSTGGARDGA FDALRAKWTGVYMANNGYDRDLALTRVATGKVDLVAFGRPYIANPDLAERLELNAPLN EGDQATYYGGGAEGYTDYPTLETV" gene complement(1915445..1916569) /locus_tag="RTM1035_09329" CDS complement(1915445..1916569) /locus_tag="RTM1035_09329" /note="COG0343 Queuine/archaeosine tRNA-ribosyltransferase" /codon_start=1 /transl_table=11 /product="queuine tRNA-ribosyltransferase" /protein_id="jcventer:1101493006649_RTM1035_09329" /db_xref="CDD:30691" /translation="MRFGFEKLAQDGAARAGVIRTPRGDIRTPAFMPVGTAATVKAMM PESVRATGADILLGNTYHLMLRPGAERIDRLGGLHRFMNWDRPILTDSGGFQVMSLAG LRKLTEQGVTFKSHIDGSKHELTPERSLEIQRLLGSDIVMCFDECPALPATDKAVAES MRLSMRWAARSKEAFGDRPGHALFGIMQGGVTPELREESAEALKAIGFDGYAVGGLAV GEGQEAMFGVLDYAPGFLPEDRPRYLMGVGKPDDIVGAVKRGIDMMDCVLPSRSGRTG QVFTRHGVVNIKNARHQDDPRPLDEACTCPACRNYSRAYLHHVFRSQEIISSMLLTWH NLHYFQQIMSEMRAAIAEGQFEAWEAAFHAGREEGDIDPL" gene 1916669..1917559 /locus_tag="RTM1035_09334" CDS 1916669..1917559 /locus_tag="RTM1035_09334" /note="COG0330 Membrane protease subunits, stomatin/prohibitin homologs" /codon_start=1 /transl_table=11 /product="SPFH domain/band 7 family protein" /protein_id="jcventer:1101493006649_RTM1035_09334" /db_xref="CDD:48215" /translation="MTEDMILNLISTNVVWLLIAILGIIIIFRGVKIVPQSEQYVVER FGKLHKVLGPGINLIVPFLDVVRHKISILERQLPNASQDAITRDNVLLQVETSVFYRI LYPEKTVYRIREVDGAIATTVAGIVRAEIGKMDLDEVQSNRTQLITTIKSLVENAVDD WGIEVTRAEILDVNLDQATRAAMLQQLNAERARRAQVTEAEGHKRAVELQADAELYAA EQAAKARRIEADAEAYATGVVAAAIAANGLEAAQYQVALKQVEALNTLGNSPSSNTIL VPAHALEAFGNAFNMLKGRS" gene 1917559..1917834 /locus_tag="RTM1035_09339" CDS 1917559..1917834 /locus_tag="RTM1035_09339" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09339" /translation="METVLWHLWWVWLAAALGLAILEILVPGFIFLGFAIGAALVALL VLLPLNLGLTALLALFTLLSLAAWVILRRLFRAPDDQSRVIREDINK" gene 1917929..1919338 /locus_tag="RTM1035_09344" CDS 1917929..1919338 /locus_tag="RTM1035_09344" /note="COG4067 Uncharacterized protein conserved in archaea" /codon_start=1 /transl_table=11 /product="S6 modification enzyme RimK" /protein_id="jcventer:1101493006649_RTM1035_09344" /db_xref="CDD:30538" /translation="MTDTPDSPQPLQFGWEEWVSLPDLGVPAIKAKVDTGARTSALHA FDIETFGPASRPKVRFTVHPIPGRDDLIIPCSAPIIDRRDVTSSNGERELRYVIASKL SVGGDTWPIEITLTNRSSMTSRMLLGRQALKDHISIVATDRFLQPELSYDVYHTARVR TAQPKRALRIAVLSREDNYSTRRIVEEGEARGHTVEVIDTTRCYMAINALAPEVHYDG KRLPRYDAVIPRIGASITAYGAAVIRQFETIGTFCVNPSAGIISSRDKLYAHQLMARA QVGMPNTAFAASPKDTGNLMGLVGTAPLIVKLLESTQGKGVVLAETKKAAESVIDAFR GLKANFLVQDFVKEAAGEDIRCLVVGGKVVASMKRTGAEGDFRSNLHRGGTAKTIRIT KAERDTAIRAARVFDLNMAGVDLLRSDSGPKVLEVNSSPGFEGIEGASGKNITGALYE MIETRARPVPVRRRKSGTD" gene 1919426..1919788 /locus_tag="RTM1035_09349" CDS 1919426..1919788 /locus_tag="RTM1035_09349" /note="COG2151 Predicted metal-sulfur cluster biosynthetic enzyme" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09349" /db_xref="CDD:41903" /translation="MMNSSEPLEGAPLIAPSSTDHPLFEQVVEACRTVYDPEIPVNIY DLGLIYTIDIDAENTVSITMTLTAPGCPVAGEMPGWVADAIEPLAGIKQVDVNLVWEP PWGMDMMSDEARLELGFM" gene 1919818..1920168 /locus_tag="RTM1035_09354" CDS 1919818..1920168 /locus_tag="RTM1035_09354" /note="COG0316 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster assembly accessory protein" /protein_id="jcventer:1101493006649_RTM1035_09354" /db_xref="CDD:30664" /translation="MFGIPGKPPVSITPAAVTQITRLMQRDGHQGLRIGVKKGGCAGM EYTMDYVTEIDPHDEVIEQDGARVLIAPMAQMFLFGTEIDYKTSLLESGFVFNNPNVT EACGCGESIKFANM" gene 1920211..1920960 /locus_tag="RTM1035_09359" CDS 1920211..1920960 /locus_tag="RTM1035_09359" /note="COG0149 Triosephosphate isomerase" /codon_start=1 /transl_table=11 /product="triosephosphate isomerase" /protein_id="jcventer:1101493006649_RTM1035_09359" /db_xref="CDD:40221" /translation="MRRKLAAGNWKMNGINASLTELQALIAAHPTPRVDILICPPATL IVQAAGLSADSPLMIGAQDCHAAASGAHTGDISAPMLADAGAVAVILGHSERRQDHAE SSALVAAKATAAHAAHLTALICVGESLAEREAAQTLDVIAEHLRHSLPDTATGTNTVI AYEPIWAIGTGLTPSPAQISEVHRFLRAELTARFGAEAAQGIRLLYGGSVKPANAPEI FALADVDGALVGGASLTTAEFSPIITALEQA" gene complement(1921036..1921524) /locus_tag="RTM1035_09364" CDS complement(1921036..1921524) /locus_tag="RTM1035_09364" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family protein" /protein_id="jcventer:1101493006649_RTM1035_09364" /db_xref="CDD:31711" /translation="MFRQKEEFGMAVRLDDLDRKILVQLQEDGGQSLDDIAKNVGSSK TPVWNRIRKMREAGVIRQQTYLLDPESLGFEACFFVLIRTSEHDAGWQAAFLRALKAR PEVQEAHRLAGDIDYILKVRVANARAYDVFYQALISEVKVHNVTALLSMEEIKSTTML PL" gene 1921644..1923038 /locus_tag="RTM1035_09369" CDS 1921644..1923038 /locus_tag="RTM1035_09369" /note="COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)" /codon_start=1 /transl_table=11 /product="uroporphyrin-III C-methyltransferase" /protein_id="jcventer:1101493006649_RTM1035_09369" /db_xref="CDD:30357" /translation="MKHFPIFVAVEGRRIVLSGGGEAALAKLRLLLKTEAHVTVFAPE PAPEIVQWAAAGRLRLQQRAMQPGDALCAVLFYAADEDTAEDARTSAIARADGALVNI VDNLEDSQFITPAIVDRDPVTVAIGTEGAAPVLARAIKSDLEARLPATLGPLARLGKA FRKAADVLPMGRRRRDFWADYYFNAGPRAMDQGGEEQVKTTLHAILDQHLNAQERDGH VAFVGAGPGDPDLLTLKARKALDTADVVIHDRLVTPAILELARREAILIDAGKEGFAA SMSQDAINALIVEHAATGAQVVRLKGGDPTVFGRLDEEIEAVTAAGIAWHVVPGITAA SASVASIGQSLTQRGRNASVRFLTGHDMKGFADHDWSALARPGEVAAIYMGKKSARFI QGRLIMHGADRATPVTVIENASRPDQRILATTLDRLPTDLAEAAITGPALTFLGLAPR AAEAQIAQSQQELA" gene 1923040..1923351 /locus_tag="RTM1035_09374" CDS 1923040..1923351 /locus_tag="RTM1035_09374" /note="COG0481 Membrane GTPase LepA" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09374" /translation="MAQEFTPKVVTANALIEGDVVYLTAADTWARDLAQAEVLTDEAD ADYRLLQAQARAGEIVGAYLADVKHGPNGPEPTHFREDFRRKGPSNLFHGKQSEGLSR A" gene 1923384..1925054 /locus_tag="RTM1035_09379" CDS 1923384..1925054 /locus_tag="RTM1035_09379" /note="COG0155 Sulfite reductase, beta subunit (hemoprotein)" /codon_start=1 /transl_table=11 /product="Sulfite/nitrite reductase hemoprotein subunit" /protein_id="jcventer:1101493006649_RTM1035_09379" /db_xref="CDD:30504" /translation="MYQYNDFDTAFIAERNRQFRAQVDRRVAGNLTEDEFRPLRLMNG LYLQLHAYMLRVAIPYGSLDPAKLRQLAYLAERWDKGYGHFTTRTNIQYNWPKLSDIP DMLDALAEVGMHAIQTSGNTIRNVTSDHFAGAAADEIEDPRPVAELVRQWSTDHPEFQ FLPRKFKIAVIASDSDRAVMKSHDIGLKIVERDGARGFEVWVGGGMGRTPMVAKLLRD FLPRADLLPYLESVLATYNRIGRRDNKYKARIKITVHENGLDEIRALVEEEFPRRRAA FSGVDQDWLARINAAFVTPTLSERDAAPYYAARDADPVFRAWADTNVTAHKHADHGIV TISLKAHGQTPGDASADQMRLVADLAENYGHNDIRATHAQNLVLPHVALADIPAVHAA LKAVGLATANIGLASDIIACPGMDYCALATARSIPVAQGIATRLEELKIEHEVGHLQI KISGCINACGHHHVGHIGILGLDRAGVENYQITLGGDASENTAIGTRTGPGFAYDEIV PAIERLIFAYLDLREGPEETFLEAYNRLGMAPFKSALYDAEARAHAAE" gene 1925041..1925775 /locus_tag="RTM1035_09384" CDS 1925041..1925775 /locus_tag="RTM1035_09384" /EC_number="1.8.4.8" /note="COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes" /codon_start=1 /transl_table=11 /product="phosphoadenosine phosphosulfate reductase" /protein_id="jcventer:1101493006649_RTM1035_09384" /db_xref="CDD:30524" /translation="MPQSDLTTRVHALNDRYRHHSAVSVLEHALRDPQAGKLALVSSF GAESVVLLHMVSVTRRDTPVIFIDTEMLFAETLVYQQELAERLNLSGLRIIRADAGDL RAQDPDATLHQRDTNACCALRKSAPLQRALTGFDGWITGRKRYQSGTRAALDFFEVED ETGRIKVNPLAHWAPEDIRTYMDENRLPRHPLVARGYPSIGCMPCTTPVAPGEDPRSG RWRDQDKTECGIHFVNGKMVRKGVSA" gene 1925772..1926179 /locus_tag="RTM1035_09389" CDS 1925772..1926179 /locus_tag="RTM1035_09389" /note="COG3749 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09389" /db_xref="CDD:45965" /translation="MTVIITDRGFAPDDWTAPITPLAEAGAETTALDLPNDTNPATLA GRLEGITFIRVDFPAAADGRGYSIARQLRLMGYTGRLRARGHVIADQYAMARRSGFDE VEISDSLAARQPEADWLFRADWQAHDYQARLRG" gene 1926251..1927102 /locus_tag="RTM1035_09394" CDS 1926251..1927102 /locus_tag="RTM1035_09394" /note="COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1" /codon_start=1 /transl_table=11 /product="Ferredoxin--NADP(+) reductase" /protein_id="jcventer:1101493006649_RTM1035_09394" /db_xref="CDD:31221" /translation="MNEMTAVTQATAKAPKTLAIPDAQIVTEVKHWTDRLFSFRVTRP ASLRFRSGEFVMIGLMQTDEKTGKEKPLLRAYSIASPSWDDELEFYSIKVQDGPLTSR LQHIEVGDEIILRPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLRDPQTYSDYDE VIITHTCREVGELQYGADLIESIRNDEMLAELIGEGFADKLRYYPTTTREESPKMGRI TDLMRSGEVFADLGVAPLSRETDRAMVCGNLAFNLEIKDMLEGYGLREGANSDPKEYV VEKAFLD" gene complement(1927180..1927992) /gene="infC" /locus_tag="RTM1035_09399" CDS complement(1927180..1927992) /gene="infC" /locus_tag="RTM1035_09399" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-3" /protein_id="jcventer:1101493006649_RTM1035_09399" /translation="MVMKNLIWILVAAVVLGGGYLLFSGKSVEEVVESVSPTETEVEA PAALEDAATAVGDAAEAVADTAAEAVEATQEAAETAVEAVSDTAAAAGDAAAEAVESA TEAVTETATEASEAAGTAVDATTETATEAADAAQETAAEAVEGAQDTATEAADTATEA ATAATETATEAADAAQETATEAVEGAQDTATEAAADAVSAAVDQPATAAEVAPEALTV EGFDLATVQTLIEGSDVGALQKTMLLEGVKAAQDNPELLKAALEAARAALGY" gene 1928116..1928745 /locus_tag="RTM1035_09404" CDS 1928116..1928745 /locus_tag="RTM1035_09404" /note="COG0290 Translation initiation factor 3 (IF-3)" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-3" /protein_id="jcventer:1101493006649_RTM1035_09404" /db_xref="CDD:30638" /translation="MQLESAAHRVYLAASNSPDPNNNRRNKAIARRPHNAPPTRETGP RINDRIRCDEIRLIGADGENVGLITPQRALEMAEEAGLDLVEISPSATPPVCKIMDFG KYKYEQQKREAEARKKQHIIEIKEIKFRPGTDTHDYDVKMRSVVKFLQGGDKVKITLR FRGREMAHQDLGRQLLERIADDIKEVGRVENMPKMEGRQMIMVIGPGPK" gene 1928864..1929178 /locus_tag="RTM1035_09409" CDS 1928864..1929178 /locus_tag="RTM1035_09409" /note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09409" /translation="MPLFEYKVLPAPTRGRKAPGVKTPEARFALGVEDLLNDMARAGW EYLRTDILPSEERQGLTSTHTVYRSVAVFRREVVIPGTAQTAAPDTASIPPRAPDVIE TD" gene 1929316..1929939 /locus_tag="RTM1035_09414" CDS 1929316..1929939 /locus_tag="RTM1035_09414" /note="COG2214 DnaJ-class molecular chaperone" /codon_start=1 /transl_table=11 /product="DnaJ domain protein" /protein_id="jcventer:1101493006649_RTM1035_09414" /db_xref="CDD:40324" /translation="MSKSDPFGFDMSVSSAKKKNPRGRRGMSGASETSTRVCDHEGCE EAGKYRAPKAPDVLDDYFWFCQQHVRDYNLKWNFFDGTTEAELNAQMSKDKVWERETR RITDPEARAWARLGIEDPHQVLGVNATQNPGKKKGGTRKLPPTERRAIEILEAEDTWT KAELRKAYKSLIKVLHPDINGGDRSQEEQLQQVVWAWEQIKESRNFK" gene complement(1929973..1931145) /locus_tag="RTM1035_09419" CDS complement(1929973..1931145) /locus_tag="RTM1035_09419" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="salicylate hydroxylase" /protein_id="jcventer:1101493006649_RTM1035_09419" /db_xref="CDD:30999" /translation="MTLDGLNIAVIGAGIGGLAVARALCLRGADVTLLEQAPEISEVG AGLQISPNGFAVLRALGLDVPLVARSMQAQAVSLRDYQRGEVLRLDLAGLQDRNYHFI HRADLIDVLAEGAREVGVKVRLMQKVSAVEGGERPCVRMANDSRFDADLVIGADGLHS VVRRALNGTLAPFFTRQVAWRAVVPNLLGRGPEAQVHMGPMRHVVSYPLRGGTLLNLV AVQERAAWTEESWSQKDDPMALRAAFGDFGPEVQAMLSAVEEVHLWGLFRHPVAQVWQ RDGLALLGDAAHPTLPFMAQGASMALEDAWVLVDALSAAEGLAEGLAAYQGRRDARVR RVVEAANRNAWKYHLSFPPLRWAAHTALRAGGAFAPERMLRQFDWLYGHDVTRKAG" gene complement(1931228..1931713) /locus_tag="RTM1035_09424" CDS complement(1931228..1931713) /locus_tag="RTM1035_09424" /note="COG1734 DnaK suppressor protein" /codon_start=1 /transl_table=11 /product="dnaK suppressor protein, putative" /protein_id="jcventer:1101493006649_RTM1035_09424" /db_xref="CDD:31920" /translation="MGRRLSEEFIMPDTGLDEGIEMKAEVFLPEDYQPAEDEPFMNDR QLEYFRRKLIAWRLELLEGSRETIEGLQDGTRAIPDVADRASEETDRALELRTRDRQR KLVGKIDAALRRIEDGEFGYCEMTGEPISLKRLDARPIATMTLEAQERHERREKVHRD D" gene 1931842..1932681 /locus_tag="RTM1035_09429" CDS 1931842..1932681 /locus_tag="RTM1035_09429" /note="COG0714 MoxR-like ATPases" /codon_start=1 /transl_table=11 /product="ATPase associated with various cellular activities, AAA_5" /protein_id="jcventer:1101493006649_RTM1035_09429" /db_xref="CDD:31058" /translation="MKFQGTEAYVATEDLTVAVNAAVTLERPLLVKGEPGTGKTELAR QVAGALGLRLIEWNIKSTTKAQQGLYEYDAVSRLRDSQLGEARVHDVANYIKRGKLWE AFASDEKVVLLIDEIDKADIEFPNDLLQELDRMEFHVYETGETIRARHRPVIIITSNN EKELPDAFLRRCFFHYIRFPDPETLRRIVEVHHPGIKDALLSTALTQFFEIRDQPGLK KKPSTSEVLDWLKLILAEDLTPEDLRRDGADALPKLHGALLKNEQDVHLFERLAFMAR RQR" gene 1932960..1934333 /locus_tag="RTM1035_09434" CDS 1932960..1934333 /locus_tag="RTM1035_09434" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09434" /translation="MRRVILPICLLLGACVPGTYSYHEPATRAAMPEEAGMPPMKAFS APRPLPPQRSNRDIQRDILDLGFQLESGRMLQHFSRFEGPITVRVTGEPPITLISDLN RLMHRLQTEAGINISRVSEGPANITIEAVSRDAIQRSLPKAACFVVPNISRLSQYRAA RNSRATDWSQLRQRERIAIFVPNDTSPQEVRDCLHEELAQALGPLNDLYRLSDSVFND DNVHAVLTGFDMLVLKVFYAPELRAGMTRREVEERLPAILSRLNPAGDGLAPRFAGST PRAWIDAIQTALGPGARPLERRAAATDAVRIAQAVGWNDHRRAFSHFALGRITQASDP DFAQEQFVLAERFYEANPGTDLHRAFAAAQLAAYAIAQGRGEDALMLIGPHLATAERA ENAALLATLMMLRAEALDLSGRVSEAQAVRLDSLGWARYGYGADWAVRAKLREVGALS PLKGPNG" gene 1934337..1934504 /locus_tag="RTM1035_09439" CDS 1934337..1934504 /locus_tag="RTM1035_09439" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09439" /translation="MIVIIGALLGALTGAFMARRRKGKLADILQYAFVYALIFALLGL FATLIIHRSAL" gene 1934511..1935695 /locus_tag="RTM1035_09444" CDS 1934511..1935695 /locus_tag="RTM1035_09444" /note="COG3825 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09444" /db_xref="CDD:33618" /translation="MFLPFFENLRRAGLPVSLREYLTFLEAMGRGLVTYDVDGFYYLA RTAMVKDERHIDRFDQAFSASFSGLEAISTQDVLDAVDLPAEWLQKLAEKHLTPQERA EIEALGGFDKLMETLRERLKEQQGRHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQDES RHRRAVKVWDKREFRNLDDSVELGTRNIKVALKRLRKWARDGAAEELDLDGTIRATAE HGYLDVQTRPERRNAVKVLLFLDVGGSMDPHIKVVEELFSAARAEFKHLEYYYFHNCL YEGVWRDNARRWNAQIPTQEVLRTYGPDYKCIFVGDASMSPYEIAYPGGANEHWNAEA GQVWLSRARSQWPHHLWINPVPQGEWGYTQSIAMIREIFEDRMVPMTLAGLDQGMRAL LR" gene complement(1935692..1936948) /locus_tag="RTM1035_09449" CDS complement(1935692..1936948) /locus_tag="RTM1035_09449" /note="COG0603 Predicted PP-loop superfamily ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09449" /db_xref="CDD:29832" /translation="MRAMLHPVRQFAARLRAASDSAECLLRFDTVPQEVVLSRAEAVA GALSEVMPGWGCRSLPGAPSEAVPVTRVTAEDSGRYSYQSWWSRAPLTDLGLAGATCG VVADLVQSYCDARPEMIGLHCGAVEVGGHLLAFTGPYRAGKTTLVTRLAAEPGVRLYC DDVLPVNPDGQGVALGVQPRLRLPLPEGVSDGFRAYVADHLTVQDRRYGYVRCDGQAP LGTQAPLAGLIVLRREASGPARLHRMRVADAVAHMIRQNIADPGETEAHYDRLAALGA QLFCATLVYSDLEEAVQVVRDLCAAPELPGGGVQIGPMLPPDPVEAETVPADLAQVFC RAEEVSAREIGQDVFLWQMAGRNFFRLNPVAGAVWALLEEPCYGHDIAETLAEVFVGT PQTMIADDLSDLLGQMCARGLVRADG" gene complement(1936950..1937297) /locus_tag="RTM1035_09454" CDS complement(1936950..1937297) /locus_tag="RTM1035_09454" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09454" /translation="MNDMAHKDETHLTRRRLLMRLGLASGLAYVAPVMVHLGAAHASE ASGRGSRGSRGSRGSRGSGGGYSRSGYYYGRGSSRGSYGSGPSGRGRQGYVSTGQVVD GIIGTLNDLNRLR" gene complement(1937483..1937806) /locus_tag="RTM1035_09459" CDS complement(1937483..1937806) /locus_tag="RTM1035_09459" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09459" /translation="MTQDKDRMLTRRRVLARLGLASGLAYVAPVMMHLGAAHASGAGG DGGGGDGGGGSGGGGSGGGGSGPGGSGGGGGSGPGGSGGGAGNARGSGPSGRGSNRSS GPSGR" gene complement(1937913..1938458) /locus_tag="RTM1035_09464" CDS complement(1937913..1938458) /locus_tag="RTM1035_09464" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09464" /translation="MKVLLDTCVIYPTVMREMILGVAAGGAFEPLWSERILGEWLRAV VKLGPGAEAQAAGEAAMMTARWPRACVTYPSSLEARLWLPDPADRHVLAAAIAGSADG ILTLNARDFPRQTLAEEGVWRADPDGFLHGIWQAQPGLVAAVAETVLDKARALSERDW DMRPLLKKAKLPRLAKALGAD" gene complement(1938455..1939630) /locus_tag="RTM1035_09469" CDS complement(1938455..1939630) /locus_tag="RTM1035_09469" /note="COG1092 Predicted SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006649_RTM1035_09469" /db_xref="CDD:31289" /translation="MIRLRPNVEPRAIRHGAPWVFDNEIVTDRRTKALSAGTIALLED ADRAPLGLVAVNMASKIMARMMERDVSVAIDRAWLVARLTRAYEMRERMHDAPYYRLV HAEADGLPGVVIDRFDDIAVIQPNAAWAEAMLGDLVAAVQEVTGVGTVLKNAGGRARG LEGLDDQSAVLAGMAPEGPVPVPMNGAIYMADLLGGQKTGLFYDQRPNHAFAARLAKG ARVLDMFSHVGGFSLAALAAGAEYALAVDGSDPALGLATQGAARMGLAERFETRRGDA FDVMEALAAEGAQFDVVICDPPAFAPSKQAMEKGLRAYERVARLAAPLVAPGGYLALC SCSHAADLSKFRAACTRGIGRAGRVGPLIHTGFAGPDHPLHANLAESGYLKALFYRL" gene complement(1939696..1940337) /locus_tag="RTM1035_09488" CDS complement(1939696..1940337) /locus_tag="RTM1035_09488" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="jcventer:1101493006650_RTM1035_09488" /translation="MEEDMSYLRIITVAMLGLTLSACASVETATRNAPLETPALRAAA VTLDVQQIRVTVPKSLKVSEANSYYPMGDIVWREDRPGDRHAQVKSIVETALARGVGD GVPGGMPAVLDVQVTRFHALSEKARYTIGGMHSIHFTITLRNPETGAPYGPTKPVKAS FKAYGGQAAVAAEQRGITQKVRITDHLAKVIRGELGLPPRAETDLVAALSVTE" gene complement(1940462..1940746) /locus_tag="RTM1035_09493" CDS complement(1940462..1940746) /locus_tag="RTM1035_09493" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09493" /translation="MARDPMDPKGLITESYRIEGITEPECRSVFLDWALSLPVGQEVP GAITEMVARYGGDNPDHPMTRVLREGMVSAAPARRRGGWRSRPRDTGDQS" gene complement(1940750..1943536) /locus_tag="RTM1035_09498" CDS complement(1940750..1943536) /locus_tag="RTM1035_09498" /note="COG1391 Glutamine synthetase adenylyltransferase" /codon_start=1 /transl_table=11 /product="glutamate-ammonia ligase adenylyltransferase" /protein_id="jcventer:1101493006650_RTM1035_09498" /db_xref="CDD:31581" /translation="MNFLDRLTRLPRPFDPAEGEEARDALPSLDPKLSDLVAGAAGCS PFLKSLILQEAAWLEGAFDDPEAALVALFAALKEAPAERLASGLREGKRRVALITGLA DLGGVWPLEEVTGHLTDYADLACDLALKAALAAEIKRSKLPSMTEADVATGAGMVVLA MGKMGAHELNYSSDIDLICLFDETRLAREDFHEARAAYVRATRKMSAMLNDRTAEGYV FRTDLRLRPDSGVTPVCMAMAAAEAYYESLGRTWERAAYIKARPCAGDIAAGERFLRT LKPFVWRKHLDFAAIEDAHNMRLAIREHKGLGGALCLEGHNMKLGRGGIREIEFFTQT RQLIAGGRDADLRVRGTVAGLARLAEKGWVPQAAAETLTGHYRFHREVEHRVQMLRDA QTHLLPNSAEEFDRLAAFMGRDTAELRAEIKARLTEVHDLIEGFFRPEEAPETPEAAE ALNGDVIARWPSYPALRSDRAVQIFKRLKPDILGRLARTAHPNEALVAFDGFLAGLPA GVQVFSLFEANPQLIDLLVDIVGTAPALAAHLSRNAGVFDAVIAGDFFADWPGRAALE AELAARLAAESDYERALDAARRWRKEWHFRIGVHHLRGLTGADHAAAQYADLAGAAIA GVWPMVLAQFAEKHGTPPGRGAVVLGMGSLGAGRLNAGSDLDLIVIYDAGEAESSDGR RPLAARPYYARLTQAMITALTAPMAEGRLYEVDMRLRPSGNQGPVATSWPSFQSYQQE EAWTWEHLALTRARVITGEPGLAQDVEAFRERLIREKGAPEAVLEAVAEMRARVASAK APAGPWDAKLGAGRLLELELMAQAGNLLAGQAARDVVSGFAGGVAIGWLSDGDSAALN AAYALCWRVQMVARLISDKPLEPERMGEGGAAFLLRETGQEGLAMLQERLETLSREAS EVMGAALVRLPKGR" gene 1943594..1944082 /locus_tag="RTM1035_09503" CDS 1943594..1944082 /locus_tag="RTM1035_09503" /note="COG2606 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="YbaK/prolyl-tRNA synthetase associated protein" /protein_id="jcventer:1101493006650_RTM1035_09503" /db_xref="CDD:43989" /translation="MKKPEKIMSKSLRRVTEALQLAGHDITPQEIGDATTAQMAADLI GCSIGQIAKSIMFRGETSGAALLFVTSGANRVCDHRASALAGEPLGKADAALIRAQTG FAIGGVAPLGHLTPPRAFFDPHLLTFPMVWAAAGTPRHLFGIDPAQLLQISGATVEDF TA" gene 1944092..1944595 /locus_tag="RTM1035_09508" CDS 1944092..1944595 /locus_tag="RTM1035_09508" /note="COG1714 Predicted membrane protein/domain" /codon_start=1 /transl_table=11 /product="RDD family protein" /protein_id="jcventer:1101493006650_RTM1035_09508" /db_xref="CDD:46162" /translation="MPLRTPNLEGATRILIDPMTDTSWHLPNPDTQPEFYADVPLKRL LAFLVDTVVIIGISLLIVPFTAFTGIFFFPLLAAVVGFAYRVVTLARGSATWGMRLTA IEFRDAKGARFDLSQAVLHTLGFTVSLSIPILQVISIVLMLTGERAQGLTDRVMGCVA INRRAAM" gene 1944671..1945501 /locus_tag="RTM1035_09513" CDS 1944671..1945501 /locus_tag="RTM1035_09513" /EC_number="2.3.2.8" /note="COG2935 Putative arginyl-tRNA:protein arginylyltransferase" /codon_start=1 /transl_table=11 /product="arginyl-tRNA-protein transferase" /protein_id="jcventer:1101493006650_RTM1035_09513" /db_xref="CDD:44288" /translation="MRHTLPIAPQFYVTAPQPCPYLPGRMERKLFTALQGEGAQRLND GLSKQGFRRSQNVLYRPSCADCAACLSARINVAEFTASKGQRRTLRRNAALKRRATSP WATEEQYSLFRRYLESRHATGGMADMDTFEFAAMVEETPIRTRVVEYTEAETGALTAV CLTDILDDGVSMVYSFYDPERSSESLGTYVILDHVAIARENGLPYVYLGYWVPGSPKM GYKAAFSGLEVYVGNRWQKMRDPEEFRAQAHPLVNDPISEQVANISLPDGRPLRARSV " gene complement(1945571..1946401) /locus_tag="RTM1035_09518" CDS complement(1945571..1946401) /locus_tag="RTM1035_09518" /note="COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09518" /db_xref="CDD:33958" /translation="MAHVSGMIQVWRIVFLTVLSVLVPHSGARAQEDMVAVSIVNGWQ TADGSHVAALKFDLAEGWKTYWRAPGEAGIPPRFDWRGSRNLARVEIEWPTPKQTVTN GMRTIGYEHVLVLPLRLTPERAGQPITLSVDMEIGVCSDICVPVSLTVAQGLDSDARR PDPQIAAALAARPYTQAEAGVGRVVCKVSPIEGGGVHLVAEVDVAAMGAQEMMVVETA NPALWVAQSKSVRQGNRLRAEAEIFHAEGRGFMLDRSGLRLTILSSGDAVDIRGCPAG " gene 1946519..1947094 /locus_tag="RTM1035_09523" CDS 1946519..1947094 /locus_tag="RTM1035_09523" /note="COG1678 Putative transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09523" /db_xref="CDD:42588" /translation="MTRTSQDMDLTGKLLIAMPGMGDPRFAHSVVLLCAHSPDGAMGL IINKPTSDLRLRDLLEQLSIAPTGQTRNLPVHFGGPVEHGRGFVLHDRGYQSTLTSLE VNEDFAMTATLDILEDLARGTGPDRALLALGYAGWGPGQLESELAENGWLTCDADMEL VFDTPNPAKWEAALTRLGISPLMLSSDAGRA" gene 1947330..1947833 /locus_tag="RTM1035_09528" CDS 1947330..1947833 /locus_tag="RTM1035_09528" /note="COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family" /codon_start=1 /transl_table=11 /product="flavin reductase-like, FMN-binding protein" /protein_id="jcventer:1101493006650_RTM1035_09528" /db_xref="CDD:32038" /translation="MTSDTLSVDRDAFLAAMRQVAATVTVVTTDGVSGRAGATVSAFS SLSADPPSVLICLRTDSRIARAVIENGAFCVNVLPEDAVEVARAFAGSSPENPAARFD GLTVTPRPEGPVLPRATAFSCLLTDRITHGSHAICIGTVTALTNAGQKPLTYLSGDYH IVRPHGH" gene 1947934..1948806 /locus_tag="RTM1035_09533" CDS 1947934..1948806 /locus_tag="RTM1035_09533" /note="COG0647 Predicted sugar phosphatases of the HAD superfamily" /codon_start=1 /transl_table=11 /product="HAD-superfamily subfamily IIA hydrolase, TIGR01459" /protein_id="jcventer:1101493006650_RTM1035_09533" /db_xref="CDD:30992" /translation="MTRIITALSDISDKYDALFVDLWGCVHDGVRALPNAVAALQAYR AGGGTVVLVTNSPRARGGVEKQLDGFGVPRDAWDSIATSGDSARAAMFQGVVGEKVWF IGQPFDDRFFDPLHLIENPVPIARVPLEEAEGIVCIGPFDPLADPADLRPQFLYAKQK GLKLLCANPDIVVDRGEVREWCAGALARLYTDMGGTSLYFGKPHPPIYDLARRRLLAL GRDVENGRILAIGDGVHTDIDGAMGEDIDSLFISGGLAATETKTSHQPDEAALTTYLS KENSAPTYTIGFLR" gene 1948907..1949350 /locus_tag="RTM1035_09538" CDS 1948907..1949350 /locus_tag="RTM1035_09538" /note="COG2030 Acyl dehydratase" /codon_start=1 /transl_table=11 /product="MaoC domain protein" /protein_id="jcventer:1101493006650_RTM1035_09538" /db_xref="CDD:48044" /translation="MLDNMPRGTICIEDIEMGMTRHLRKVVTDRDIELFAEVSTDRNP VHLDDDYAQDTIFEGRIAHGMLTAGLISAVIGEQLPGHGTVYMGQTLKFLAPVRPGDM VHAEVEVIGIDHGKRRVQLDCRCLVNGKKVLIGEATVLAPSRKFD" gene 1949392..1950360 /locus_tag="RTM1035_09543" CDS 1949392..1950360 /locus_tag="RTM1035_09543" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09543" /translation="MNAAPNWGVVATIKAPTRDILTFAAHHLDLGAHRVHIYLDAPDP QAEAALRAHPKCRVILCDDDYWNRRSRKGRPDKHQPRQSLNATHCLNKRPQVDWLAHI DVDEFLWSETPIADRLARVAPDRLSARVRPIEALDPGPYKIEAEPYRAYKSCALSQAD RRAQTNAIYPTYGPYLNGGFLSHVAGKVFVRTGQPDISLRIHNAFINKEMDNKAEELH ELRLCHHHAATWDHWLAAYRYRLSLGSYRAELKPAPHSDGYAFNMHEFFHMLEEDGGE PALRRFFSEVCTATPELQKRLASFGHLHHINLDLDAKRARHFPDHS" gene 1950558..1952078 /locus_tag="RTM1035_09548" CDS 1950558..1952078 /locus_tag="RTM1035_09548" /note="COG0513 Superfamily II DNA and RNA helicases" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase RhlE" /protein_id="jcventer:1101493006650_RTM1035_09548" /db_xref="CDD:30859" /translation="MTKFSDLNLNPKVLKAIEEAGYETPTPIQAEAIPHALVGRDVLG IAQTGTGKTASFTLPMLSLLSRGRARARMPRSLVLCPTRELAAQVAENFDTYSKHLKL TKALLIGGVSFKEQDKLIDKGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRML DMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSNPARVEVARQATASETI EQGVVMFKPSRRENADSEKRKLLRALIDREGAACSNAIIFCNRKIDVDVVAKSLIKYG YDAAPIHGDLDQSQRTRTLDGFRAGTLRFLIASDVAARGLDVPAVSHVFNFDVPSHAE DYVHRIGRTGRAGRSGKALMICNPRDEKNLAGVEALIQKEIPRVESPVTFTPPTTETE PPQGSEERPAKPRRARNVSRGKPEERPAASHKAPETVSEQAVEATPPQERPQERRPER TPEPRQDRNRDRNDDNAPRHREGRGRQDHGGGPRVMGLGDHLPSFIALSFDERRTG" gene complement(1952130..1953416) /locus_tag="RTM1035_09553" CDS complement(1952130..1953416) /locus_tag="RTM1035_09553" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /protein_id="jcventer:1101493006650_RTM1035_09553" /db_xref="CDD:30987" /translation="MSLRWLKPYLPRSLYARAVLILLLPVITLLLVVSLVFAQRLFDD VTQQMVKTVAREVRLVLDEPEGSPVSEMLEIERRRVPASEMPEADDYDWFDLSGSVVI RELRGYFEDLERVSLTDNQFVMLYFHRDGGVVELVFDRRRVSARRPYQVLLNLAFYGI LMTVVSYVYMRKQLKPITRLAEAAEAFGRGRHVPYRASGALEVRAAGNAFLDMRARLE RQIEQRTLMLSGVSHDLRTPLTRLRLSLAMLEDEEAAPMLRDVRDMERLLEGFLAFAR GAHEGEPEPVDPIALVTQIVEDAQRAQNDVTLVEARGVGTVALRAENIRRAVENLINN AVRYGSRAEVSVVMTEKSLRIRVEDDGPGIPPDSRDDAIKPFTRLEPARNQNRGMGVG LGLSIVLDVARAHGGTLRLGESARLGGLCADIVIAR" gene 1953492..1954388 /locus_tag="RTM1035_09558" CDS 1953492..1954388 /locus_tag="RTM1035_09558" /note="COG0491 Zn-dependent hydrolases, including glyoxylases" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family protein" /protein_id="jcventer:1101493006650_RTM1035_09558" /db_xref="CDD:30837" /translation="MAEDVGQAIRRILAPNPSPMTFWGTNTYLVGTRRLAVIDPGPDT PAHLAAILAALGPGQSVSHILVTHAHLDHSPLAARLSAETGAPVLAYGDATAGRSAVM QSLAESGLMGGGEGVDTEFAPDLVLCDGERIMGDNWQITAHWTPGHFGNHMSFEIADS VLSGDLVMGWASSLVSPPDGDLTDFLRSCARLGALKARRFLPGHGAVIEHPKARVDWL VAHRKAREAAILDSLTRAPLTATEITSRVYADTPQSLLTAARRNVLAHLIDLMQKSQV APVGGLQADAKFARLQTTCTSS" gene 1954447..1954518 /locus_tag="RTM1035_t09890" tRNA 1954447..1954518 /locus_tag="RTM1035_t09890" /product="tRNA-Asn" gene complement(1954598..1954855) /locus_tag="RTM1035_09563" CDS complement(1954598..1954855) /locus_tag="RTM1035_09563" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09563" /translation="MFHCSLKLRNAFAHDIHTTFDTPSVKDRCATLRMKADDCDSGEL GEFRVNAAGQFETAAVALIMNLLNRPHYVAKQRRTPQEWRC" gene complement(1954930..1956291) /locus_tag="RTM1035_09568" CDS complement(1954930..1956291) /locus_tag="RTM1035_09568" /note="COG3119 Arylsulfatase A and related enzymes" /codon_start=1 /transl_table=11 /product="putative sulfatase" /protein_id="jcventer:1101493006650_RTM1035_09568" /db_xref="CDD:32933" /translation="MQPNIVIINPDQMRWDYASCQGHPFIATRHLDRLAAMGTRFSHA FAASPMCGPSRTSFLTGKYPIEHGIRQYGGTYDQAQPNALRVLGDAGYVRGIWGKDHT FKGNVIGSLYDEGEDICIGIMGGHPDYINAWDSTSLDVGSKWNLTKRLTDEGLAFIHR QARTSQPFFLTLNYQDPHPFFACPEPYSSLFHPDQFELSPNYRKAPVDGEITRLTNWR IHSNEINMPVAELKQAMAIYAGQIRYVDDQVGRILNELEALDLLENTIVLFWSDHGEF IGDFGVTHKIPAFYECLIRAPMVIWDPTGRVPRGVCSGLVELMDGMATVLDLCGLKQP EGSHARSMAGTVVGRRDVYADSGMLVRQPLEPISGHVIKGAMPPTAFGPGSMLRTEDW KLCLYGEDKGELFDLRRDRYETTNLFGAPRHAQIQDELMLRLTQRMMCLGQMPEALPT LKV" gene complement(1956313..1956741) /locus_tag="RTM1035_09573" CDS complement(1956313..1956741) /locus_tag="RTM1035_09573" /note="COG0520 Selenocysteine lyase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09573" /translation="MEDYRRQLDQERYARLIKVTCVRNPWDRCVSYYFSPHRGTVVWS EQDFAHFISNTVHPHAHYLTLDGLKSDPFDNVDVILKYETLEMDFKALCGRLGLGDVA LPRLNASVRDTYRSYFVRDDVIELVAEKFAPEIDRFDYSF" gene complement(1957068..1957802) /locus_tag="RTM1035_09578" CDS complement(1957068..1957802) /locus_tag="RTM1035_09578" /note="COG3551 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09578" /db_xref="CDD:33353" /translation="MANTYAAKTVCILGMHRSGTSCLAGCLEERGLFLGDVINFAKFN RRGNKENPEIMQINNDLLKLNGGTWDNPPEEMRWSDELRARRDAHIASLASRPIWGFK DPRTVFTLPFWQEAVPDMHYVATFRDPFAVVRSLQRRGPNLLPVIAPIDLWMKYNLRL LQHITAHDIPLVSFDWPADVYNKAVDYIADTFGVSTEGLTEAPFYEQSLRTSDEDEGM TQSMEPEVRMVYEALLERAMPVTDFV" gene complement(1957947..1959071) /locus_tag="RTM1035_09583" CDS complement(1957947..1959071) /locus_tag="RTM1035_09583" /note="COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09583" /db_xref="CDD:32004" /translation="MDFGGLGFLRLSQKFEAAGHSSVWITYGDQVARLRGHGCDVEQA GDLNRLRLMPMPHIDDIAKNPAGHDGRVASLRRVVERIAQHRPDMVFIDRLLVGAGLA VAQLDLPYAAMGTPGGYWRFFPDPAQGHLNIHPWPEPVQEYHDLGERWKDELGWQKGG LDSGWLRSPYLNVQFLPTRFYAHVNDPASISIHNHTSPALAPNVRRIGVSFGNQGCTE HLLRLTEALIANIPEGNGVSLFLGNHPDLHAHFHSVSCGRDVELHQWIEFNTVMPGLS SFLFLGGVGTIWHCLQNGVPMIVAPGFIGDQLENARRIAALGLGAHMTEDQPCQDIAA IVQRVTMDSDIRNRLAEAREPASFSHTMDSFFELICDLTR" gene complement(1959320..1960234) /locus_tag="RTM1035_09588" CDS complement(1959320..1960234) /locus_tag="RTM1035_09588" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase" /protein_id="jcventer:1101493006650_RTM1035_09588" /db_xref="CDD:31009" /translation="MEYLCGPSVDLYRRLLAGTGHEDLLAESYYIHAFRTADKASLKN LDYRIRVEKGGDLALIGPRELQTLEPGLSSDFRAAVVIKGQARARAPGQLGQVLTAKA RGLGIEVVQAEVIRLSHQNGSWTIFAKGQNFTAPRVVLAAGVWSADLLRALGITLPLV AERGYHVEFAAPGVTLNHSVMDVDGKAVASSMLGGLRLAGTAEFAAIDAPPDPRKQAI LTRQAKAMCPDLSTAQGSFWMGRRPSFPDSLPALGAVPGQGGLFAAFGHSHYGLMMAP KTGEVLADIISGCPANAPLDALKMDRFL" gene complement(1960562..1962787) /locus_tag="RTM1035_09593" CDS complement(1960562..1962787) /locus_tag="RTM1035_09593" /note="COG4666 TRAP-type uncharacterized transport system, fused permease components" /codon_start=1 /transl_table=11 /product="TRAP transporter, 4TM/12TM fusion protein" /protein_id="jcventer:1101493006650_RTM1035_09593" /db_xref="CDD:34284" /translation="MTNSSNDLSAEELAKLTPEQLAEIERKYDEGAATRAVGPNVGMV LRAVALVFALYHFVTAGFGLPADHWHMGWHLSGLFILTYALFPIFKSDSAFAMKVSRL RLGNIPLYDLVFMALGVASSLYVGLAWRGIPALGIEEQTFRMGNPNGYDVFFGVIIIL LVLDIARRTLGWVLPLIICVFISYALFGTYFPGLLQHPGVNFKTFVSSMYFPQEGIFG VTLWVVSTIVFHFVLFGVIAQRTGLGQLFIDNATILAGRYVGGPAKVSVVSSAFFGTI SGSSVANTVSTGALTIPNMKRLGYPGHFAGGVEAAASAGGQITPPIMGAAAFIMAEFL QLPYTTIVIAAIVPAVLHYVGVFAVVHLMALKLGLKGMAKDSLPQFAAVWREGWANII PLIGLLVVLFSGYTPYMSAFCGISLAVIAGMARLREPTTLIYPAAFIAFVLWKWMGQG FEGQMALLLVIGAVVATLNPQARIRLPQMAESLEVGVKYALAVGAASAAVGIVVGVIN TTGIGFRMGFMVTQGAGSMAMSLNDMFTFGGWEMISTPDLQLFLSLVFIAISCILMGA GVPTTALYIMLASVAQPALAQLGVPPIASHMFVLYYGVVSEITPPVCTSAYAAAAIAN SNPFRTGVSAFTLGLGKVVAPMAFVYAPVLLIVSSTGFDLWEFTYTATSCILGVLALS MAVVGYWKAPMGAFMRVLLAVSGIVFIAPSLQADLIAALIAAPAILSQLFKRRSTPAA V" gene complement(1962870..1963619) /locus_tag="RTM1035_09598" CDS complement(1962870..1963619) /locus_tag="RTM1035_09598" /note="COG2358 TRAP-type uncharacterized transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP transporter solute receptor, TAXI family protein" /protein_id="jcventer:1101493006650_RTM1035_09598" /db_xref="CDD:32505" /translation="MQNGELEAGLAAADVTREMYLGVGTFEGKKHDKLRLVANLFPED LHLVMPAGATLDGLGDLAGKRVGIAQAGSGTQVAVLKMLEEWGVNRDNMEEAELNNSQ SAERLADGQLDAFFYAAGWPVAAMVQLASTKGMTLYSFSDEEMQKINDVVPAYIPSKI PGGVYEGIDNDTMTPAVSAYLVVSSDLSDDLVYGITKALWNDNTRNLLDNGHAKGKLI RPETALNGVDSLGVPLHPGAERFYREAGLLK" gene 1964080..1964964 /locus_tag="RTM1035_09603" CDS 1964080..1964964 /locus_tag="RTM1035_09603" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006650_RTM1035_09603" /db_xref="CDD:30928" /translation="MGRTQPAISLSLRELEASLGITLFEREGRRLIPVPEAYYLLAEA DEVLDRLSTVSRTMKSLGDAASGNLKVAAMPGPSSYLFPGYISRVLGDFRDIKLTLTM RSSQQILELVATQSIDFGFADLDFQLEKRKGLLTAETFSARCFCALPQAHPLAQKAAL SWEDLHDQPMGGLHSAHWLQKRIHMAFQGHGARYNQIIESQFFIPLLQFVSQGQCCAI VDPMTVASEQQSRLNGDALVFRPLAQDLRYDCAIFVPRLRPMSQLARRVKDGWKAEVL RLMTVLGADPMTDIYSNE" gene 1964957..1965052 /locus_tag="RTM1035_09608" CDS 1964957..1965052 /locus_tag="RTM1035_09608" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09608" /translation="MSEHEVDAAVHLLESSEDAFATADISLDQSE" gene complement(1965184..1967754) /locus_tag="RTM1035_09613" CDS complement(1965184..1967754) /locus_tag="RTM1035_09613" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09613" /translation="MQTGGQTMAHLATNYSSFETFLRGAESTYTVDFIALNGSGVSGT AILAIGAPEATGEQYLNVSITVEGMEPNQPVPQHIHGLFDLEGNPANSQTPDINSDTD RDGLVEVLEGVSQYGDVLLTLTEDGAAPMTNADGSFTYIRAFDLNDAANFFSPVTMND YVGADILPLTLREIVLHGVSVPNGIGAGTPGEVNGLQDGFVPILPAAAGEIEEITLEQ ALSLLDDQRAMGGVTLALGDAGETVTGTEGDDVINGGAGDDVLIGLGGKDTLTGNGGS DDIDGGQGDDVIMAGSDANIPNGADTGASGALPRTEYDNGYAGGAGDDLIEGGAGDDI ITGDDDSRVSTATGGVFDAGADGSDTIFGGAGNDEIHTGSWSDGDDGLSNISTGVLGD VAHGGDGDDILRGAGGDDILNGDAGNDDVGGGGGADSITGGAGDDVLFGNAGADVLDG GTGNDTLRAGPGDDDDPFNAASFGASGALPLSEYDNGYAGGAGDDLIEGGAGDDIITG DDDSRVSTATGGVFDASADGSDTIFGGAGNDEIHTGSWSDGDEGLSNISTGVMGDMAF GGEGDDILRGAGGNDFLAGEAGNDDIGGGGGADSIVGGDGNDVLSGNGGDDIISSGNG DDVAMGGDGDDRIGGGLGNDQLSGDAGDDVIGAGLGDDTADGGDGNDLVNGGGGDDVL TGGAGNDSMGGSQGADTLSGGDGDDLMGGGTGMDVMSGGAGNDQMGGGFGNDMVDGGV GDDFVAGGNGRDTLLGGEGNDTINGGNGDDQMQGGDGADVFVFNSFNAGEVDVISDFD TAGDLLDLRGVIGGFEGLSIAATTFDGSGATQVSYLDHTIILVDVEATTLDGGDFIFG " gene complement(1967930..1968055) /locus_tag="RTM1035_09618" CDS complement(1967930..1968055) /locus_tag="RTM1035_09618" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09618" /translation="MIKNCKPPLDMRNSNFLQQVMGVRAGDGPLFAAVVANKRHS" gene complement(1968133..1969287) /locus_tag="RTM1035_09623" CDS complement(1968133..1969287) /locus_tag="RTM1035_09623" /note="COG4782 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09623" /db_xref="CDD:34393" /translation="MPTRTAITIFQAHRMDRWLCFGVVLIWLAGCAPRADMVPDAAAL TGETIVPVYVGTTRAQEAAGVWSSKFAGPLTYARVDVSVPKTRRPGIVMLPGMHPDPD RHFLTREVASFSGRAAFREEVARALASDRITDKEVVVTIHGFNNTLGDGVFRTAQMIR DFDIDALTVHYAWPSRGAPLGYAADRDAVLIARDGLEQMLEDLGRAGARDIVLVAHSM GAQLTMEVLRQMAIRKDQTMLSRISAVVLLSPDIAPSVFRAQAEAIGDLPDPFVIFTS QNDPALRLSARLTGVPRRLGNIMGVEEVAGLNVTVINLSSAQDAASNHLAALTSPSVI SFLKQTEAVRRNLETDPSGRAGLLPGTMLLAQEATAIMLAPVALVERAGN" gene complement(1969463..1969561) /locus_tag="RTM1035_09628" CDS complement(1969463..1969561) /locus_tag="RTM1035_09628" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09628" /translation="MAAPIVPLGSGDVPMVNAFPDIGFVGSHAAKV" gene 1969518..1970039 /locus_tag="RTM1035_09633" CDS 1969518..1970039 /locus_tag="RTM1035_09633" /note="COG1414 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09633" /translation="MGTSPEPKGTIGAATAKSRRATEIRDVFAENYLDYQYRFVEFFV EHLEDVSRAFRGDLQQMLILAIIGQVTLRAVRDAGIRDQDPSLSNLERPGISASRIAD VTAIPRQTVRRKLELLRQKGWITQLPNNSWTMCHRDGISGARVDLNEMDQRAIDRIAR LFTDLEALVNTCR" gene 1970291..1971388 /locus_tag="RTM1035_09638" CDS 1970291..1971388 /locus_tag="RTM1035_09638" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="Secretion protein HlyD family" /protein_id="jcventer:1101493006650_RTM1035_09638" /db_xref="CDD:31186" /translation="MSLRLMVFLAAFSLTTCDDDEGPADPKPPRAVRTMIVAQGGEDA YRTLPGVLTAAETMRLAFPVAGRLIDVPLRAGDRMTQGEAVARLDPADIEREITAAEA KLAAALARLDATDAEFQRQRTLFERGLVARAGFERISADLSAALADRRVAETDLAAAR DRLDRITLRAPREGVVTALLANRFEELAAGQPVYEVAVTAALQAEVLAPEALLAVIAP GTPVAVRLPAFPDQSFAAEVTEIAADAEAGVAYRVKARLADPPEGAKTGFSAAVSFTL PRAAGAIDIPLSALIFADTRSEPTAGDSATVYVFDEATGTVRARQVRIDGVVGTDLLV TEGLSPGEHVVTAGVALLSDGEPVRLWSLPE" gene 1971385..1974444 /locus_tag="RTM1035_09643" CDS 1971385..1974444 /locus_tag="RTM1035_09643" /note="COG0841 Cation/multidrug efflux pump" /codon_start=1 /transl_table=11 /product="acriflavin resistance protein" /protein_id="jcventer:1101493006650_RTM1035_09643" /db_xref="CDD:31183" /translation="MTGLTRAALDRWRLVLAVTLVLIVTGVMTYFTHPSQEDPEITIR TAVVTARFPGMSAERVEQLLVKPIEEAARQIAEVDTIESAAQTGFATVKVELRSEVTL VKPVWTTLRNRMDELAPSLPEGTVGPLVNDDYGRVAVTTLALHGADFSASELRATARW LRDRLATVPLIGRIDLYGVQDERIWIEFDRARLDQAGLTVERMLDAVADQNLILSAGA LQTEAGFRYALSTDGAFEDWRAIGDVPVPLPSGGTTVLRDLAQISRGYIEPVRNPVFF NGNPAVTLGVSMVEGGAIQTFGAGLEAALTDLRSALPLGLSLDLVTHQPPIVAASVAD ATENLFQTIATVMAVVILFLGMRAGLIVGAIVPLSIVLALVGMALWGIPLHRISIAAV IIALGLLVDNGVVMAEDIKRRIDGGTTPRDAALEASRTLAIPLLTSSLTTILAFLPLM LASDATGEFLRALAQVLALTLMASWLLSVTVTPLLCVRFLRSTQGPTETAPGRGTRLY QAALRRALGARALVLLATLFAFAVALAALGRVPTGLLPPSERAQFVLSLELPAGISED ETARVARRLAGFLGDTTANPEIVGNVVYVGAGGPRFFLALSPLDPAPHIAFAVVNIAD ATSVSVVRERVENWMAANLPEARGWTELLFLGKTPPGTVEIRLIGGDADALFSTGRVV EGVFRDIDGTRQIRGDWANPVLQLTVLIDEARARRAGVAPSAVARTLAARFDGAHVTD YREGDRVIPVLIRAEQEARNSLDALADVTVLSGDGVAVPLMQIADYGGELQPWVIRRV QQERALTISALRPGLSAAELLAEVAPRLEALDLPQGIRWEPDGEVVAKADANAALFAT LPQCLLGIVLLLIWQFDSFRRPAIIFATIPLVLVGVAPGMLLMKGTLDFNALLGVLSL AGIIINNGIVLIERIDAERAHNDDLGQALVTACAARLRPIVMTTLTTILGLLPLHLFG GELWRGMTIVMMFGLGVGTLLTLFVVPCLYATIFADQRRSRHRPAVP" gene complement(1974423..1974815) /locus_tag="RTM1035_09648" CDS complement(1974423..1974815) /locus_tag="RTM1035_09648" /note="COG1226 Kef-type K+ transport systems, predicted NAD-binding component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09648" /translation="MLAISVTVAIHAGFMVVAARFGRRASRMPKRAVTKALAVISVVM WFFLSICAQCWFWAMLLIGLGALGGVEEALYFTTVTFTTLGYGDVVLGPDWRLLGAFA ATNGTIIVGWTTAMIFVAVQRVYGTAGR" gene complement(1975021..1976619) /locus_tag="RTM1035_09653" CDS complement(1975021..1976619) /locus_tag="RTM1035_09653" /note="COG2303 Choline dehydrogenase and related flavoproteins" /codon_start=1 /transl_table=11 /product="probable alcohol dehydrogenase protein, glucose-methanol-choline (GMC) family" /protein_id="jcventer:1101493006650_RTM1035_09653" /db_xref="CDD:32458" /translation="MDQYDYIVIGAGSAGCVLANRLSADPATRVLLLEAGGSDNYHWI HIPVGYLYCIDNPRTDWRFRTQPEPGLNGRSLLYPRGKVLGGCSSINGMIYMRGQARD YDQWAQMGCTGWGWDDVLPLFRCAEDHHAGDSDLHGAGGEWRVEKTRVRWQVLDSFLE AAEQAGIPRTDDFNSGDNEGGGYFEVNQRAGIRWNTSKAFLRPAKARKNLHILTGAQA ERLIIAEGEVKGVVYHHEGRSITAHAARETVLCAGAIGSPALLELSGIGDGAVLQNAG IAPVVEVPQVGGNLQDHLQLRLVYKVHGVPTLNEKASSLRGKLGIGLEYLLSRSGPMS MAPSQLGIFTRSGPEKETPDLQYHVQPVSLDKFGDPVHPFPAMTASVCNLRPESRGSV HVTGPDFRAPPSIRPNYLSAEADRDVATRAIQLTRRIVAQPAFAQYHPEEYRPGPTYQ SRDDLIRAAGEIGTTIFHPVGTCRMGADEAAVVDPRLRLKQLRRLRIADASIMPTITS GNTNSPTVMIAEKAAQMILEDARA" gene complement(1976731..1977738) /locus_tag="RTM1035_09658" CDS complement(1976731..1977738) /locus_tag="RTM1035_09658" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC branched-chain amino acid transporter, inner membrane subunit" /protein_id="jcventer:1101493006650_RTM1035_09658" /db_xref="CDD:33917" /translation="MRDMAGKSEPVASETIATLPNAGTVRIVLLLIALAFLLVAPFYL YPIFVMKLLCFALFAAAFNLLLGYTGLLSFGHSAFFGGAAYFTAHAVKEWGWSPEFGI LLGVVGAAVLGLIMGAIAIRRQGIYFAMITLALSQMFFFFCLQAGFTKGEDGIQSVPR GVLFGFIDLSEATNMYYFVLGVFLLGMLIIWRIVNSPFGMILKSIRENESRATSLGYS VARYKLAAFVMSAALTGLAGGIKALVFQFATLTDVTWQMSGEVILMTLLGGIGTLIGP IFGAGIVVTLQNYLATSDFPVTIITGVVFMVCVLLFRRGLVGEFYASRLGRRLGFNPE N" gene complement(1977731..1978618) /locus_tag="RTM1035_09663" CDS complement(1977731..1978618) /locus_tag="RTM1035_09663" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="ABC branched-chain amino acid transporter, inner membrane subunit" /protein_id="jcventer:1101493006650_RTM1035_09663" /db_xref="CDD:30905" /translation="MITIFGVPTAALFGQLLVGLINGSFYALLSLGLAVIFGLLRVIN FAHGAQYMLGAFAAYLLSLWLGLGYWSALILAPVIVGLLGALVERTMLSRLYKLDHLY GLLFTFGLALTIEGTFRYFYGAAGQPYATPAALSGGVNLGFMFLPIYRGWVVVASLIV CIAVWLLIEKTKLGSYLRAATENPTLVQSFGVNVPLLLTFTYGLGASLAAFAGVLAAP IYQVSPLMGSNIIIIVFAVVVVGGMGSILGAIVTGYMLGIAEGLTKVFYPEASNIVVF VIMAIVLILRPAGLFGKDA" gene complement(1978620..1979324) /locus_tag="RTM1035_09668" CDS complement(1978620..1979324) /locus_tag="RTM1035_09668" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="ABC branched-chain amino acid transporter, ATPase subunit" /protein_id="jcventer:1101493006650_RTM1035_09668" /db_xref="CDD:30759" /translation="MSEPLLKVTDLHAWYGESHILHGVNLHVNEGETICILGRNGMGK TTTLRTIMGILRKRTGQMRFAGQDLMTMPLHRTAHTGLGFVPEERGIFATLNVEENLM LPPKVAEGGMSVEEIFRLFPNLKERRNSPGTKLSGGEQQMLAMARILRTGARCLLLDE PTEGLAPVIIDAIGEVLTELKSRGMTVVLVEQNFRFASRVADRFYLMDHGQMAMEFPV GDLEARREDLNQALGV" gene complement(1979321..1980100) /locus_tag="RTM1035_09673" CDS complement(1979321..1980100) /locus_tag="RTM1035_09673" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="ABC branched-chain amino acid transporter, ATPase subunit" /protein_id="jcventer:1101493006650_RTM1035_09673" /db_xref="CDD:30760" /translation="MTAHPVSKQDQPRVVLSARGLGKDFSGFTAVNNVDLDVQHARIH ALIGPNGAGKTTVFNLLTKFLQPTRGKITLLGADITKMKPDRVARMGLVRSFQISAVF PHLTVLENVRVALQRPNNLATQFWLPMSALDRLNARADVLIDDLGLREYRDTRASDLS YGRKRVLEIATTLALDPEVLLLDEPMAGMGREDVKLVANIIRDVAQHRAVLMVEHNLS VVADICHHVTVLQRGEIIAEGDYDSVSKDPVVRSAYMGSEA" gene complement(1980115..1981317) /locus_tag="RTM1035_09678" CDS complement(1980115..1981317) /locus_tag="RTM1035_09678" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC branched-chain amino acid transporter, periplasmic binding protein" /protein_id="jcventer:1101493006650_RTM1035_09678" /db_xref="CDD:31027" /translation="MRKLLTSVAAIGLLAAPALAQVSDDKVKIGILNDQSGVYANFGG RYSYEAALMAVEDFGGTVLGAPVEVTTADHQNKADIASNIARQWYDTEQVDSIMELTT SSVALAVQALSKEANKITITTGAATTELTGAQCSPYGFHWAYDTHALAVGTGGALVEQ GGDTWYFLTADYAFGYSLEENTGNFVKANGGEVVGAVRHPLASTDFSSFLLQAQASGA KVIGLANAGADTQNAIKQAAEFGIVQGGQRLAALLFTLSEVNGLGAEAAQGLTLTESF YWNRTDASREFGKRFLERTQAMPNMIHAATYSAVTSYLKAIEAAGTDETEAVAAKLKE LPVQDLFAENGVVAANGRMIKDVYLMEVKAPDQITEPWDYYNVLSTIPGDVAYIKPAE SGCPLVTQ" gene 1981519..1982427 /locus_tag="RTM1035_09683" CDS 1981519..1982427 /locus_tag="RTM1035_09683" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006650_RTM1035_09683" /db_xref="CDD:30928" /translation="MAHLTWDDLQFFLAVAREGQLSRAARQLQTSHVTVSRRIDRLEA GLDLRLFERNPRGYELTSNGRRLVETAERMEEEAERLLLDLTGDISAQRGLLRVAMPE GFASFFSESLLPVFMDKFPNIALELITLPQVMSLSRREADLSVTLDPTKASPYHSEKI VDYALRVYGTRQYLGDHIPITTPDHLLNHPFAGYIEDMIFARGLDYLGDVHPKIRPVF KSSSIFNQLAAVRAGLCLCVLPCYIARHYDDLVPVLPSEITILRSYWLTCHRDVRAML RERAVMEFIKTHMQIHRDHLLPWPVV" gene complement(1982586..1987796) /locus_tag="RTM1035_09688" CDS complement(1982586..1987796) /locus_tag="RTM1035_09688" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="calcium binding hemolysin protein, putative" /protein_id="jcventer:1101493006650_RTM1035_09688" /translation="MGLELDAYKARTDQTILRLQALQDVTFRIGTLISAAQFGVTKYK TADKTAENIDDSLFTVNNLLTVAGFVSPLKTPVTALKTVLNRIEPVVDRIDDKFDEIS GKDNTATPETEADGQFVETIETGLTGAAVTFSIVADLLTLRVRQLEIASAATGSFSDA LDAATRGSEGWSGNFTALNAAVEAQMAARNDLIQGVQTLYTNVKAEVDAFLAVLVDID FESILGELVDLEEIGKVFDFLKAPLSAAETLLAPIQPLLNAVDFLVGLIVNPIIDFVI ETLNLDSILEATEAAIDALIPSINLLDAFEQLIQPLQDFLLEYIVDGLGTIPLLDTVE DAFFGGVVGNADQGPTGWGNDVANLLAGDSGDDILDGLDGSDTILGGGGNDVLIAGAG YDLLEGGAGNDLFYFGASFTEYELARDPDTGDIIVSHLAPQTAVNTGIDVLVALQDGD HVVFTDISFSGADLNNALIGGSVLNGDRNGFAEDDLLFLNSTGTPVNGFHVANGLGGN DRIFGSTLNDQLNGGSGDDVLVPGRGDDQANGGTGTDTFQVLRGANSRLTVDLIAGTS FGQGRDTLSSVENVIASPDQDHKIRGTDGANVIYTGDGIDVITGLDGNDTIDAGGEDD YIIGGRGADVINAGAGNTDVMISGSAAQAGISDHYIGGDGFDVVSYTSSSNTIRFDIN DQTDDPSILQQLLSYMDGIEVSGPVRIDAGSGRISRFDLAGNLVTTDTTDGVEGFMGS DLADTLFGAPTARLLHGAGGDDVIHTGGTENIDGGEGDDLILIEEVEGGSTALQVKGG SGFDRLQLDGVGDARWFYRVESAISLTLRAHKTTVQGEDLRNAGDVFFSLRPREVEEI SLGNFDDHAIYAPGGSATAFFFLQDGNDRFDGQNGFADVHAGLGNDIGNFNTGGGGIF RGGAGDDFAVFDDAGRDNAAIMGADNDVVRIERFRGTADGGTGYDTIAFDVNFNSRIV ANLAAGTVVSFNGLVVNNSEQVDMTLENFEVVIATEFNDLIDGSSRSEQILGRGGNDT LRGAEGRDKLYGGAGNDTLEGGADEDLLHGGPGNDRLDGGAGNDTASYTWARPGGLDG AIIADSFGAVTVNLETGSATGAFGTDVLISIENVIGTGADDRLIGNALNNMLSGGAGH DSFEGGGGDDILITGAGDDTVVAGAGDDTVVVGLGSKTLDGGSGFDTLDFGTSSGAIN LNLATGIYSGTLIDRAPRWADLDPNGDGIAESDGTEARIFGGVALTPLDVFEANPSQA NSADDLSRVLPTLQDSSFAAFQIALVDVAVATSGGFAGFERVIGGDGNDTVSGTSEGD QILGGAGRDSLSGLAGNDVLSGGEGDDTLSAGEGDDTLEGGLGNDRLIGGAGFDLAVF TIASTEVRIAQEGTSLSLVSSEGRDTVDGIEQFRFSDGTLTLAQVLTLPPAGRLETGT VGDDTIIGSSGDDTLSAQGGNDSINGLGGNDGVFGEDGNDTLSGGEGNDTLAGADGDD DVSGGPGDDSMGGGLGNDTLRGGEGDDIIGAGFGDDSVSGGTGNDVVAGGAGNDTLSG GDGNDSMSGSFGNDLIEAGNGADDIGGGTGRDTIDAGAGDDRVGGGEGDDSILGGDGN DFLAGGGRNDTVDGGAGNDTINAGAGNDVITGGTGADQFVFSSFFDGEADVITDFEDE IDSFLIRRFDPDTGVENINNGGNGLAGFVVAMNIVNTAAGAQMTVNGNTILVEGITAA QLTVDDFTFI" gene complement(1988366..1990594) /locus_tag="RTM1035_09693" CDS complement(1988366..1990594) /locus_tag="RTM1035_09693" /note="COG0464 ATPases of the AAA+ class" /codon_start=1 /transl_table=11 /product="ATP-dependent Zn protease" /protein_id="jcventer:1101493006650_RTM1035_09693" /db_xref="CDD:30813" /translation="MSSQPICKTAKASNFAAALASATARSLFNSTWNGTIEIRQDYDE PDDAHFDAGVLIDAPSPPRQMSEVGPQPPMAESMEAAEIAASIRDGVDPWAQSSPDEG SSWRRGNPTPSLIVSAFAMAQIVESEEQLKALFRSGQITHFCCHSLAFLHVMEQILPN VISYWRRLLPTSDTAPLESIAFGADAGTAGKSARQKLSPLDAKIERSLSLGASVLLVT TAETQLSAETRALVTRRVGCWGPTQDNVIETLRLTHSTTGLLAESEIRNRLPSEQLLK RVTPAQIDAAFAAPTSLNVADRLAEIAQKMTQGQPDLTLDAVHGLGEVRTYLSRMLND LNAWRTGALAWAEVTSSAVLYGPPGTGKTTLANAFAGSAGIPIISTSYADCQKHGHQG DMLRALDDAFATAKEAAPAVLFIDELDSFTQRDTPDYNGGYMRGVVNGLLEQINRAKD VEGLVLLGATNELEAVDPAVIRSGRFDLKLHVPLPDKKGLEAILTAKLGSETAIRLDL ANLAARLLGQSGAVAEAIVRDALGRAREDRTTIRQNHLESAADQIVPKLDQEILRRTA IHEAGHVVAMTQLGWPLPKRVCLTGEGGKVEHEPFNFLTPCKARERLVVLLAGRAAEI CVLGAPSSGAGIGEKSDLAKATSVAMFIERQWGFGETGLLWDGEAATNIWSVPGYVRR RAEQHLMEAERNALALMKEHKAQLITLAKHLLRVRDMTAHDVELFNYYHASQGSERMS LR" gene complement(1990591..1991058) /locus_tag="RTM1035_09698" CDS complement(1990591..1991058) /locus_tag="RTM1035_09698" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09698" /translation="MTRNAKWFGLSGEFFVDSILLRFGIYTSQLPEVLPADRIVYHPR ADLRMQIKTCCRARDGYFHFNLSRGYHRSPTGVKPYETNDFDLVALVALSENAVKFSA DRQGSQRIAISEIETLRADPCASLEQAIDDLGFAGGKAPGSSLSPTLGGGGCR" gene complement(1991253..1991762) /locus_tag="RTM1035_09703" CDS complement(1991253..1991762) /locus_tag="RTM1035_09703" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09703" /translation="MKEIIMSKNITTTRSRAAKAVVKPEDNLFDHFCELMVRVLLALE EEELAADAGWDTAVRQPYCAEVDAAWKLVALQADVIAALKPRSADEKLLHSMAVLISC AVSATSIRVLEAARAHAMRCMLKADKDISPEVRDLADEARDGIEQMLEHTSARSCDNN STRHLPLAA" gene complement(1992354..1993733) /locus_tag="RTM1035_09708" CDS complement(1992354..1993733) /locus_tag="RTM1035_09708" /note="COG4974 Site-specific recombinase XerD" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09708" /db_xref="CDD:29503" /translation="MGADHDLFTDLQAASDNKWLENDFFNKSIAAYQLALHSSIKYSI ADLYRSGSWQKYEQRAAALARKHPSRDPYAAYLSRAEHDDWSGVNSRQSYRSALVRLA AQTVLEVGPSFWRYVLVKTNDTEARNQLVRQLKRHLDEEVWYQIKTVTAALSSVELKK LRGAAAFLIQVPPDPEHTAVRRASTNGQKKSSKPRTENSKKKTLYALNQHQRRRAKES PGYDWRSHLWARAVLPDRYLDDNARAAIAVLMLTGCRPSELADDLGVVIMAFERGDLD HLAFEISGAKLAEADAGGHGKGQDLRKIEICCQTPEAHWLFTHVSDHSGGQMLIKLAA PTHSLTGLALMPTERQRRVTNRLGKLMERLGRIAFPRLQQRLSPYVFRHALSSDLRSG GAGWSKEEIAIALGHQSTRTQSNYGSSNTSRGLAGNRAEQVTQVSALNPVRSSERGDP GAPDGPRSA" gene complement(1993754..1994494) /locus_tag="RTM1035_09713" CDS complement(1993754..1994494) /locus_tag="RTM1035_09713" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Integrase, catalytic region" /protein_id="jcventer:1101493006650_RTM1035_09713" /db_xref="CDD:40748" /translation="MPQGRADEQRLTDDIIELADQYGRYGYRMVTGLLNNAGWCVNHK RVERIWRREGLKVPQKQKRKGRLWLNDGSCVRLRPERPNHVWSYDFVQDRTADGRVYR TLNIIDEYTREALMIRVDRKLNSTDVLDALTDLFILRGPPEYIRSDNGPEFIAQKVRD WIAAVGAKTAYIEPGSPWENGYCESFNARFRDELLNGEIFYSLKEAQILIEQWRVHYN TVRPHSALGYRPPAPESIVPLDQRPTMH" gene complement(1994602..1994880) /locus_tag="RTM1035_09718" CDS complement(1994602..1994880) /locus_tag="RTM1035_09718" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Transposase and inactivated derivative" /protein_id="jcventer:1101493006650_RTM1035_09718" /db_xref="CDD:41572" /translation="MAGKREKPEEIVSKLRQVEVLQGQGATIAEAVRQIGVTQQTFYR WRKLYGGMGRSQLARLKELEKENQRLRRAVSDLTLDKLILTEAAKGNF" gene complement(1995250..1995702) /locus_tag="RTM1035_09723" CDS complement(1995250..1995702) /locus_tag="RTM1035_09723" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09723" /translation="MDEHRNFARKQHVGHGTKLRAQFTEYAVAGLRKSDYAGVFQKTK DRGRPAWLAEIKLDGFQRSLFIKLWSAVDKAGNIRRLGLLQGLPLTFEKRSFDLIVIP EGVDRFHGIVELQDARLIINVFPAPARGKRRVYLCHLEVARSDGSVEA" gene complement(1995999..1996166) /locus_tag="RTM1035_09728" CDS complement(1995999..1996166) /locus_tag="RTM1035_09728" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09728" /translation="MGRQTPALIIVCKDCPQGMASVPFRFDRRSGEAVLQDGGNAIGP QALMLAIAVAI" gene 1996458..1996643 /locus_tag="RTM1035_09733" CDS 1996458..1996643 /locus_tag="RTM1035_09733" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09733" /translation="MDKLDAHVWVLDTVLDMIIYAGVNGLHRSSEALIAIYPELEQEV EAMKPKNVVRFPTRQLR" gene complement(1996773..2000015) /locus_tag="RTM1035_09738" CDS complement(1996773..2000015) /locus_tag="RTM1035_09738" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09738" /db_xref="CDD:32755" /translation="MRNNLSIALGSENFANEGRQISSSALGAEFLGWEFFSGFENRQQ QVGFDHVRWAGGLPVEEGINTDESPDGSREVVFDLTFENIVDWDRNVSNGYSDDPVPR EGIREMMQFAVEHNASFAMIAPTVRYIDVAFDDPVSALEQARNDIRVFATRLLNGEFG DLPKEFILEVGTEYYSVATLWREHFSRPGIDIARTAGEVFAAMVDELDKVLRDPALNP TGYDINIAVQLGRSFSRDDDPSRGFDANGDINGGWGEHADNQDFITALQDIGALDAVD SVIFHRYVPNFWGIERGLWTPVGGVTLETVIDQWESAAGRDLGLVGGHLAPAAQGDDD IEFHAPSLTSILQLTTALLANGMDYGTIFGLGFGTDGSLGFRSEVFLGGQLYGMMVES LPGLAVHDGFQNNTSPVDSVWQDGRIVDEFLRVDDSVNSYVFENEDLVVIFLVAKDFA AETLEYSLHFEEAFETVSISRLWDDDNQFLNPRTDERIGHIGQMAHEADVPLSVTGSG SRLDLSFHHDFEVIRVTLDRRVVDAFQGTDGDDLFRINHREDQVFDAGLGNDTVQSSV DFVLRHASAGRDIENLHFVGSDDLTGIGNAADNTLLGNSGNNHLSGVWGDDTVSGEDG NDTLVGEVGDDLLIGGRGFDHLFGGDGHDTLRGGDQADYLSGGSADDVLHGGEGADTL IGGDGADIFVIDPASMSSDIIADFTIGVDRIDVSRWQLEAFSEIIISWIDGQTFVQDA VGSFFFIDNLSRGEGESLSVDNFILNADDEHIGSVENNTLAPSVSPPAASLHPPTPIM PGVAPVLQVGGTEDDLLEGGTGADALAGNTGADTLLGHSGNDRLAGGDGDDLIEGGEG DDNLGGGLGADHLEGQAGNDTIGGGGGNDILFGGNGADVLSGGEGNDLLAGGEGNDRL AGSFGHDTLRGGNGNDRIGGGPGRDILEGGQGNDELGGGEGDDIVTGGAGDDFLAGGG REDLLDGGTGDDTLNGGLGNDRLIGREGADVFIFNEFTAGERDVIVDFQVGEDHLRLA GIEGQGLNGRFLALTIQDTDEGALLRHAGHEILLDDVTAASLSHYDFIFL" gene complement(2000674..2001129) /locus_tag="RTM1035_09743" CDS complement(2000674..2001129) /locus_tag="RTM1035_09743" /note="COG3316 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="jcventer:1101493006650_RTM1035_09743" /db_xref="CDD:33125" /translation="MMEPGIDVSHQAIRRWSVKFGPLITHVLRRQQPRPGNVWYLDEV VGKIAGRSYWLWRAVYHHGVMLQENLQSSKDKRATKWLLVKLMKRGGLMLKRIIMDKL RSYCTAKREVAPGLDHWSQKGFNNRSDSFRFCCLPANSTMTPSMSSYSW" gene 2001506..2001988 /locus_tag="RTM1035_09748" CDS 2001506..2001988 /locus_tag="RTM1035_09748" /note="COG3350 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09748" /db_xref="CDD:33158" /translation="MSRKLIFAATALTALFAFGPAMAADEANVTPGLTYSGAPLGLHG ADPVSLIDHGENTEGSAAYVAAHDGVAYYFASEQNMKAFKANPERYMPQYGGFCAFGV SVGKKFDGDPSFAAVMHDKLYVFLNEDVYKAYLKDQAGTVAKAEANWGKIKHTAATDL " gene complement(2002130..2002765) /locus_tag="RTM1035_09753" CDS complement(2002130..2002765) /locus_tag="RTM1035_09753" /note="COG1573 Uracil-DNA glycosylase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09753" /db_xref="CDD:31761" /translation="MPASRPDKTRSEIEKLQAEITACSVCSDLPLGPRPLFQIGAGVR ILIVGQAPGRRAHLAGRLFDDASGVRLRNWLGLDEATFRDPEKIAILPMGFCFPGTGR SGDLPPRPECAPLWRARVMALLPDIMLTVVIGRHAQSWHLPEISRLPLAEAMRDWPTC WPASILLPHPSPRNMGWFQRNVWFETDLLPVLRARVIKLIGTGEKQNNLGD" gene complement(2002746..2003135) /locus_tag="RTM1035_09758" CDS complement(2002746..2003135) /locus_tag="RTM1035_09758" /note="COG0346 Lactoylglutathione lyase and related lyases" /codon_start=1 /transl_table=11 /product="glyoxalase family protein" /protein_id="jcventer:1101493006650_RTM1035_09758" /translation="MTMIDHLSLGVADISAACGFYARLFEPLGINCLAAGDGFAAFGR DRIAFLLLPPFDGKPASAGNGAHVAFAAPSREAVDAAHAAGLSAGAGDEGAPGVRAAY PMPNVYAAYLRDPWGNKLEIVHAGFSA" gene complement(2003147..2003665) /locus_tag="RTM1035_09763" CDS complement(2003147..2003665) /locus_tag="RTM1035_09763" /note="COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09763" /translation="MMQSRSHHNLTFSRLTEVPLETLVEHMSDPRVARHMPLLSQPWD VDAAKHFVAAKEVSWQRDGLGHWAFLQDGHYVGWGGFQKEGAEWDFGLVLRGEAFGLG LAITNAALNFAHADARIPFVTFLLPPSRRHLGALARIGAELVGEVPYETARFLKFRLD TPCPATPPTLRN" gene complement(2003679..2004404) /locus_tag="RTM1035_09768" CDS complement(2003679..2004404) /locus_tag="RTM1035_09768" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /protein_id="jcventer:1101493006650_RTM1035_09768" /db_xref="CDD:30970" /translation="MRNAMAGICRWRQENTMKKPITLNSHALCPYVQRIAIALVEKGV AHERRVVDLGNKPQWFLEISPLGRTPVLTVGDASLFESTAILEYLEDTQPNPLHPADP VERARHRAWIVFGAEVLDTIAGFYSARDAVTFEAKTAALRRHFTLLEDHLSEGPWFSG ADFSLVDVVFAPVFRYFDVFNEIDRFEFFDGLTKVQAWSLLLAARPSVRDAVSEDYNA LLRAFLLRRDGVLATRIRISGAA" gene complement(2004417..2004785) /locus_tag="RTM1035_09773" CDS complement(2004417..2004785) /locus_tag="RTM1035_09773" /note="COG3794 Plastocyanin" /codon_start=1 /transl_table=11 /product="copper-binding protein, plastocyanin/azurin family" /protein_id="jcventer:1101493006650_RTM1035_09773" /db_xref="CDD:33589" /translation="MPNLMPLTRRRFGIGLGAFLGCAGTLRRSHAHDRVQETMVRIDN STFEPLVVEIFAGDSVTWENNDLASHTATALDGSWDTGPLERGTQGRIIFTEPGEYPY VSTFRSHMKATVLVRNRDGG" gene complement(2005045..2005527) /locus_tag="RTM1035_09778" CDS complement(2005045..2005527) /locus_tag="RTM1035_09778" /note="COG3350 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09778" /db_xref="CDD:33158" /translation="MKRKLTLTAATLSALLAFGPAMAADEFNVVSGLTAAGAPLGVHG VDVVSLIEYNKEQAGSAKFTTVYDGVSYYFTSEKHQKSFEANPSKYIPQNGGFCTFGV SVGKKFDGDPSFASVVDGKLYVFLNEDIYNLYLKDQAGTIHKAEENWKKIQHTAAKDL " gene complement(2005716..2006264) /locus_tag="RTM1035_09783" CDS complement(2005716..2006264) /locus_tag="RTM1035_09783" /note="COG0151 Phosphoribosylamine-glycine ligase" /codon_start=1 /transl_table=11 /product="cytochrome c, class I" /protein_id="jcventer:1101493006650_RTM1035_09783" /translation="MRSKTLAMILSITSLPAFAQMATEAGQITVEPVLEVPSEEYRTG WVQIGAFSVLAENPAEGAHEIHAVFIDEDALKAYLAEGRFVEGTKIVKEVWDTQTEDL TTGRASYADTLKGRFVMVADPDGKLDAGPRFGDGWGWAFFPGQETRITDTEDYRDACL ACHEPARDHGLIYLQGYPALRR" gene 2006460..2007425 /locus_tag="RTM1035_09788" CDS 2006460..2007425 /locus_tag="RTM1035_09788" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family protein" /protein_id="jcventer:1101493006650_RTM1035_09788" /db_xref="CDD:47669" /translation="MLDLLSDILTRLSFRGTLYFRTSFTEPWGVRVPAYRDVARFHYA HRGEALVRVAGQQAPVTLAQGDLVIIPHGEPHVLSCRHTGPEEALPLDDVLSRSGFPG YGTLVWGGEESPRDTQLICGHFALAEGSRHLLFDRLPPYIHLRGYGEEAGGWLNATLK VIGAEAGGARLGGDLIALKMSEAIFAQAIRAFIEQSPEGIPGIAGFADPQIARALSMF HRNPAAEWTVAGLARIAGLSRTGFAERFTARLGVTPMSYVTAWRMQIAREALAERGLS VAEAAEVSGYASESAFSRVFKKEIGVTPAAVRLLAKAGRDALNAA" gene 2007440..2007892 /locus_tag="RTM1035_09793" CDS 2007440..2007892 /locus_tag="RTM1035_09793" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09793" /db_xref="CDD:40669" /translation="MKIREAQPDDAAELARLSRALAVHVADPDPGDDTSLIVAACFGT ERWLDVLVAEQGGVILGLAAYGRRFELHTRQKTLWLADLVVDEGLRGLGIGGLLLQAV KRRALDLGCVAIVADLWVCNIAARVFYDHAGARKVSDIEIRVIDLPSV" gene 2008063..2008425 /locus_tag="RTM1035_09798" CDS 2008063..2008425 /locus_tag="RTM1035_09798" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09798" /translation="MRFVTKNIHAYLDYPVAISLMGLPFLLGLGASNPLALKISPVVG LAAFVLTVFTDHHLGMIRVLPYKLHLAVDLAVGLLFLVLPFALGFSGLDAAYYWLNGA AVVTVIGLSKPEPQMPAA" gene 2008466..2009014 /locus_tag="RTM1035_09803" CDS 2008466..2009014 /locus_tag="RTM1035_09803" /note="COG2128 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="probable Mip" /protein_id="jcventer:1101493006650_RTM1035_09803" /db_xref="CDD:32311" /translation="MARINQVSDTAATPEASALFSAIKGKIGMVPNLYRVAANQPSVL AAMLGLNETLAGGTFDGRTREAIALAVAGANTCDYCASAHSAISAGLKVAPEAVKDHL VGRSDDPRTAAILKLSVSIVSAKGKVSDADLVSARAAGLSEADIVETLANVVANIFTN YLNHVADTDIDFPVVTTGQVAA" gene complement(2009446..2009619) /locus_tag="RTM1035_09808" CDS complement(2009446..2009619) /locus_tag="RTM1035_09808" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09808" /translation="MLGTARVQPRRGVAIVAFGKADDQQEAQQTAQHHSCAAQGVAFV AAKGVLARTGVRD" gene 2009913..2012075 /locus_tag="RTM1035_09813" CDS 2009913..2012075 /locus_tag="RTM1035_09813" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="type I secretion target repeat protein" /protein_id="jcventer:1101493006650_RTM1035_09813" /db_xref="CDD:47634" /translation="MDGDVQRVPAGAVVQMSNGDLFFSVSAEDLGAVALFSENDGTER DVATLRVSGQVRSEDIDLSAQSFPQSFGVMSLGGDVSNIDILLSAGDGLITGTLGNDL INQDYVGDPNGDRIDNLDAAGTNGELVNSNADFVNASGGNDTVLAGFGNDTILGGDGN DSLDGGTGADLIFGGMGNDTLDGGTGTDASDTALGPIYQEISTAGAQAVAGANGRGAF TVTTTSNETVAFGSTADLSGFFMGDIALPNPAVESETHTHRYTEGLSPTQIPGVRILM SRLESLEVVTLSLDGTALNLNAAIASGNVSFEGNGAFTIDSAGRLTGLLADPVDSEQA FLELTIRIPHSRLDVFISTATFGSIDGAIYELFVDTNPLVPNITTSANDTLFGDAGDD LLLGRDGDDLIAGGTGNDRFVPGTGHDTISDFGSDDTNAVRDGDQSNNDFVNLSGFYN QANYDAAVLTGDIDPAVIRNPLEWLRADYDDDGILNERAAGWTAGNSLTLTNRGATVD PQTLNFDTTNVICFCRGTRITGANGEIAVEDLNVGDRVITRDHGYQKIRWIGRTTVKA HVEIAPIRIRKGVLQNVRDLRISPNHRVLLKGPMLELLLGHTEVLVPAKYLVDGETIL RELPGDVEYFHILFDCHELVLSEQCWTESFHPGCVGWSTLCEEVRAEILHLFPCLDAL TGNSDMITARYVVNRKEAAVSLQAMRNGGNRTNKRTLC" gene 2012069..2012680 /locus_tag="RTM1035_09818" CDS 2012069..2012680 /locus_tag="RTM1035_09818" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09818" /translation="MLMQRENKTCLRGEVPDAQNTVKSCEAGFEPREKLRAAPCEDSR DMGDLHEVTTVNAVILIAVSSVIGFGLAVVSAILGSSLLMSFFVYLVVSILLFTALLG LAYFAARPMGSLSIAENALDLVECETTETVRVLSARNRWVRIWWLIIICAFILSIRLT DEVTIQIAVCAVGVLVWVWLLKNRSSMKSQRIVATCKGASSGK" gene 2012677..2013066 /locus_tag="RTM1035_09823" CDS 2012677..2013066 /locus_tag="RTM1035_09823" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09823" /translation="MTVLKTFDKIEADIVTVTRREKSDRLSARVRLRFRLSDQQDEDV GEMFVSIELIEKESYRWRRTKRQIIDTAWEWLDGYFDGASLGFEGENLFSDILDGKHR LSYCGLTQEEEHSLQQELLKIEREVAV" gene 2013237..2013518 /locus_tag="RTM1035_09828" CDS 2013237..2013518 /locus_tag="RTM1035_09828" /note="COG2963 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="ISxac3 transposase" /protein_id="jcventer:1101493006650_RTM1035_09828" /db_xref="CDD:41572" /translation="MSSQKRFTDEFKRDAVAQVVDRGYAVSEVAERLGVSTKSLYTWK AQFARPAKGREAESDLAVELRRVKKELARVTEERDILKNRSGPQPACAR" gene 2013711..2015072 /locus_tag="RTM1035_09833" CDS 2013711..2015072 /locus_tag="RTM1035_09833" /note="COG3547 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase" /protein_id="jcventer:1101493006650_RTM1035_09833" /db_xref="CDD:42350" /translation="MTKRKTGGHPDLNVVNPNAAAIDIGSTMHMAAVNPDTAAMPVRA FGTFTQDLHDLADWLQSCGVTSVAMESTGVYWIPAFEILEAHGFEVILVNARYAKNVP GRKTDVSDAGWLRQLHSYGLLRGSFRPEAEIATLRAYMRQRERLTEYAAAHIQHMQKA LMEMNLQLHHVVSDITGATGMRIIRAIVDGERDPEVLAAFRDIRCHSSLDTIKGALVG NDREEHVFALTQSLELYDFYQEQIEACDRRLEAAVGALTARADGELAPLPKARIKGRQ HNAPSFDVRAALYGVLGTDLTQIHGLGPSLALKLVAECGTDLRAWKSAKHFTSWLCLA PGNKISGGKLLSSRTRRSSSRAAALLRLAATTIGRSDTALGAFYRRLSSRIGKQKAVT ATARKIAVLFYNAVRHGMSYKDQGAAAYEERHRKRLLSNLQRRAKTLGFVLAPIHETA AVS" gene 2015172..2015984 /locus_tag="RTM1035_09838" CDS 2015172..2015984 /locus_tag="RTM1035_09838" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="ISPsy26, transposase orfB" /protein_id="jcventer:1101493006650_RTM1035_09838" /db_xref="CDD:40748" /translation="MVHVSGFYAWLKEPLSQRAQDDERQTELIRQAWCESGKIYGYRK LADDLRDLGEQVSENRVARLASLAGILAQIGYKRRPGRYGGKPAVVAFNTLDRQFEVN APDKVWVTDITYIKTHEGWLYLSVVIDLFSRRVVGWSAQPRMTTDLALQALLAAVWRR KPKTKVMIHSDQGSQFTSREWQVFLSQHNLQASMSRRGNCHDNAVAESFFQLLKRERI RRRTYPTREAARQDVFDYIEMFYNPKRKHTNNGMLSPVDFETRQQKLNEAGV" gene complement(2015981..2016124) /locus_tag="RTM1035_09843" CDS complement(2015981..2016124) /locus_tag="RTM1035_09843" /note="COG3316 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="putative transposase" /protein_id="jcventer:1101493006650_RTM1035_09843" /db_xref="CDD:33125" /translation="MSYRDLKEILAERGVTVDHATLNRWVVKFAPLIADRAQARNEVP LVS" gene complement(2016281..2020273) /locus_tag="RTM1035_09848" CDS complement(2016281..2020273) /locus_tag="RTM1035_09848" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="probable aggregation factor core protein MAFp3, isoform C" /protein_id="jcventer:1101493006650_RTM1035_09848" /db_xref="CDD:47566" /translation="MLINISSASVEERVAFGSGVLEFIVTLDAPSAGTVTVDYRTRQG TASEFLDFTGESGTLVFAAGETVKTITIQTASDSLDEVDEFLEVELFDPTGGGTFAND VDVVRAIGWIEDNDGTLDDRALAVSDPVIEEGDNGTTTARFTLSVSEAFGVSTNMGWA TVSGTATAGSDFTAASGIATFLPGQTSTIVNVDVTGDNAVELAETFGVSVTPSASVFS GSSGAVGSATILDDDAGPRTISIADAAIDERTFFGSGVLRFAVTLSQPSTGTVTVDYR TVQGTASEFLDFTGATGTLTFAAGETTKWINISTASDDIDEVDEFLEIELFDATGAVL AGGVDQVRATGWILDDDGTADDRAMQISDPILTEGQEAQFIARLSRPADDEVTVAYAT SGGTAQSGEDFTAANGNFTFAPGQTLTATTVATTADAVAEPAETFDLIAVAPGASVFS GSSGAVGSATILDDDAGPRTISIADAAIEERTFFGSGVLRFAVTLSQPSTGTVTVDYR TVQGTASEFLDFTGASGTLTFAAGETTKWINISTASDDIDEVDEFLEVELFDATGAVL AGGVDQVRATGWILDDDGTADDRAMQISDPILTEGQEAQFIARLSRPADDEVTVAYAT SGGTAQSGEDFTAANGNFTFAPGQTLTATTVATTADAVAEPAETFDLIAVAPGASVFS GSSGAVGSATILDDDAGLRTISIADAAIEERTFFGSGVLRFAVTLSQPSTGTVTVDYR TVQGTASTSTDFTGVAGTLTFAAGETTKWINVNTTGDTIDEIDEALELILSDPSGAVL AGGVSELAAVGWILDDDGAPEDRALYVHDTRVIEGDSGTAQAVFQPRLSRSSDSAIEV DYTTISQSAAAGSDFASRTGILTFAAGQTTGAVFVPIFGDLVQEDAVEEFQMNFAPAT NQVFSGPGFNATGTILDNDFSNSLPTGAVTLSGSAVEGSTLTADTSAVADADGLGAFS YQWFRNGLAIAAANDISYTLLPPDIGSEITVRVNYSDGNGANETLLSQGSLVAPRPGT SAGELIVGGPLGSLLEGLGGNDTLIGGGGNDTIAGGDGNDSIEAGGGNDNVSASEGND FVDAGAGDDSVGGGVDNDTLIGGVGNDVMGGGFGDDFMSGGAGNDVVAGGAGDDTLEG GEGNDSMSGSFGNDLIFGNGGADDIGGGTGRDTIDAGAGNDSVGGGEGDDSISGGDGN DFLAGGGRNDVVDGGAGNDTINAGAGNDTITGGTGADQFVFSSFFDGEADVVTDFEDG LDSFFIRRVDPDTGETNITNGGNGLAGFVAAMNIVDVEGGAQMTVNGNTILVEGITAA QLAVEDFQFL" gene complement(2020976..2021917) /locus_tag="RTM1035_09853" CDS complement(2020976..2021917) /locus_tag="RTM1035_09853" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="putative nucleotide di-P-sugar epimerase or dehydratase" /protein_id="jcventer:1101493006650_RTM1035_09853" /db_xref="CDD:30800" /translation="MVGAAILRRLEARRGAGEDLTLITRTHAELDLTSQAAVRDFMQS ERPDVVILAAAKVGGIHANNTYPADFIYENLMIECNVIHQAFDAGVRRLLQLGSSCIY PRAVPQPMREDALLTGVLEPTNEPYAVAKIAGIKLCESYNRQHGTDYRSVMPTNLYGP GDNFHPENSHVLPALIRRFHEAAQEGRDEVTIWGSGTPRREFLHVDDMAEASLFVLDL PRDVYAANTQDMLSHINVGSGTDISILELAQMVAEVTGFQGKITTDPSKPDGTMRKLM DVSRLATMGWRARISLREGIEDAYRWYLAQTPGSVRG" gene complement(2022046..2022837) /locus_tag="RTM1035_09858" CDS complement(2022046..2022837) /locus_tag="RTM1035_09858" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="Ata11 protein" /protein_id="jcventer:1101493006650_RTM1035_09858" /translation="MIKRLTLFREYALPNLMNVEAILKEIYTARCQDLKEYTLFDGGA HKGYHTIRMLDLSGCKRVYAVEADPFMAQAFNTILETQRPNDLDRVSFHQKALQDDPA RASIPWKSSTTHVGRSSIVATNSERQTIWGDNPDMVYRESFEVPATTIDALLADEPLP IPFLKLDLEGADLIALRGARKTLRTKRPVVAFENSVHAPKVHGFTLEEMAAYFDGLGY VPINFVGERMTPDSWFGFFEAWLAPEEDANWLAGQLDEALARRGI" gene complement(2022834..2023712) /locus_tag="RTM1035_09863" CDS complement(2022834..2023712) /locus_tag="RTM1035_09863" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="Methyltransferase FkbM" /protein_id="jcventer:1101493006650_RTM1035_09863" /translation="MHVSALLGNLDINCFSDILGPYRTLNPDLKICVDGGAGLGETAE KIFKNLPQDDVKVLAFEPNPNNIAEFKFSDPRLTIVDAALGARRATARFHVAATTQRQ SETNPYLVPGTSFVGKLVDEAASFDKGDQYEVQVVRMDDSLRENGCSGAQFIKLDLQG GELDALKGLGDMLGDVHWMWIEYGGQPELLELLIERGFVLFDTQYLFFGDMKPEVKEA FTVTRKGKNSVGREIFFGRRKQVWRNYASQFSYCRKSLGMVQTDLVAVAPAYISSFLD ACYLKGKLGAQGAIVS" gene complement(2023756..2024625) /locus_tag="RTM1035_09868" CDS complement(2023756..2024625) /locus_tag="RTM1035_09868" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09868" /translation="MALLTILANCQAGPMAALISQFCPDLNVIRSPLVHQITDKNRLE VIQNIQKSDIVIHQPLGPSFKELSTAELKSKFPSKTFVSFPSIFFGGLFPQLSYLRLP EGGTMKGPLSDYHDTRIIDCFLNRESSEVCLGRMKSEDPLELKYYDISLKESLGRDRA VDIPVMEIILDEMSKSPPLFTFNHPTNRVLWRVLERVLKLLGLQAPQALDLLPEREFL GNTRAMIPDSIPKSLGLDWRQPKYSIWEDELPLRELITSFYQLYNEIPNFPAICRDNE QRFNLPVRLGHYS" gene complement(2024625..2025743) /locus_tag="RTM1035_09873" CDS complement(2024625..2025743) /locus_tag="RTM1035_09873" /note="COG1089 GDP-D-mannose dehydratase" /codon_start=1 /transl_table=11 /product="GDP-mannose 4,6-dehydratase" /protein_id="jcventer:1101493006650_RTM1035_09873" /db_xref="CDD:31286" /translation="MKKALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASLFNTQRVD HIYQDPHGGRQNFKLHYGDLTDSSNLTRILSEVQPDEVYNLGAQSHVAVSFEAPEYTA DVDAIGTLRLLEAIRFLGLENKTRFYQASTSELYGLVQEIPQRETTPFHPRSPYAVAK MYAYWITVNYREAYGIYACNGILFNHESPRRGETFVTRKITRGLANIAQGLEDCLYMG NIDSLRDWGHAKDYVRMQWMMLQQEVADDFVIATGVQYSVREFITWSAQELGITLEFT GTGVEEIATVTAVTGDKAPAIAPGQVIMRIDPRYFRPAEVETLLGDPTKAKEKLGWVP EITVQEMCAEMVAEDLKTAQRHALLKVHGMELPVSLEG" gene complement(2025832..2030529) /locus_tag="RTM1035_09878" CDS complement(2025832..2030529) /locus_tag="RTM1035_09878" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006650_RTM1035_09878" /db_xref="CDD:40621" /translation="MSKVFIYPALLNLEDIDNVVCRLAWYFKPYLSKIDSIHFTSRRA LVDAAKLAPQLDPLVAGDLAAVKAKIKLLDHEDFAAAISEVDLARDLLLIWDETAENN APAPVKAAIKALGAKQGLYRVDPLRTRMEGSFYLWAGLNRYADRAALLEVNHARMRAM VADIGQHEKAYVFGSGPTLSDFVEGHDFSDGICVISNSIVKNRDIIAATRPRIITAAD PLYHAGCSGYAGAFRDELIQALRETGAWFVCPMRDFAIYDTFLPVDLRSRIIGVPFDK EGAPPSNLAETFYLKSYPNVLTLALLPIAASIARKIEIVGCDGRNLTDDSFFWSHDKK AQFNDKMSEIQAAHPAFFAIDYNDYYTDHCRDVEEVLTALEAAGKVIETATPSMIPAL RMREAPNPDSMAAGSKVAVFAMIDPDAKDDWGHFLAYDKRVAEGCHDLNTDFALICRK ELDPKFFPDNAELVLPVFSVHSWTVGKDWPQTRRRDMMQFAKELDEAFSTLDLRYPAD AICVFMYIGSIEVAETVEHLLMRRPRFRAVINLFWSYNFDQNDPIYKSQWYRVAKRLE RSNQVFLMHSTEQIADEFSTDWSVSLPVLPHPSTTFDDKTVVTLDELPLSKPGKPLRA VFPGGTRKEKGFALSTGACALLANDPDLRLRLRARIDRVSGKDLEDALQSMTAEVGTK VDILGDDMSDGEFIDMIRTADIVVIPYLSEAFRRRTSGILVDAFLLGKPVVVLKNTWL SDIVKAGHIGLCADPDPAALASAVREVAKRYDEFLPGVAKVRSDYLGKHSWKALVKSV VKRADLSLPAPRKNLTKAEMDGLKKELKELISKLPTRAPIYLPTEKIAVEAQIKGLKR VKHIYEKGLKEVYSPRLRALREKYRGTKRCFIIGNGPSLNETDLSLLKDEVTFAVNGF FLKAKDLDWTPTFYVVEDHLVAEDRAKWIKAFKGPTKLFPAYLGYMFPESEDTIFYNH RPRKSYPHGFDFSTQADEITYTGATVTFSMLQLAYYMGFEEIYMIGVDASYAIPEDAQ QASSYSVGVIDMKSDDVNHFHPDYFGKGFRWHDPQVSKMVEAYKEARKVVDQTNQRIY NATVGGQLEVFERRNFADLFPPKRPLELRDYPRLLLLDLTPIGNGSATGELKHNLLRD WPSEQILQVSCRNSEDLVLTRQRLGPDSIPFEVKPKEAAAFVDAFAPEVVLYRPVPDT RVLHDFAMPLIERLQKPLVTWIMDDWPHHIKISDPAQYNRIHADFETLLSHSSMRLSI CNAMSEEMFRRYRLPFRSLANGVAPEDWQTPKKHTPGTMVVRYAGGLEPNMTRASVLR VARVIESLGKKGYDLRFEVNTRAAYYNRNLNDFGKFKHTRFTNNVLSAEGYKGWLMQA DVTLIAYNFDPATADYVKFSMANKMPECLASGSVLLAHGPKGFATVDYLAGVDGAVVV TEDSDAAVEAALLALRADPEWRADLATKARATAFERHNIHRLREQMWLILSQAAKSAD SVVARRVVQHMHPIALAAELLCAPADALHRIDRDAAVKETVARTLDPAFPDRQLSAHL ENCIAFARKKTRV" gene complement(2030588..>2031146) /locus_tag="RTM1035_09883" CDS complement(2030588..>2031146) /locus_tag="RTM1035_09883" /note="COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases" /codon_start=2 /transl_table=11 /product="phosphoglycerate dehydrogenase" /protein_id="jcventer:1101493006650_RTM1035_09883" /db_xref="CDD:30460" /translation="LFLIDRGVRAGGWPKPAGISLAGRTVGVIGLGDIGRNTVTRLQA LGLKAIAYDPGVTGDAGLDGLTRAAWPERVEECDFLVFTCALNKHNFHMLNADVLARC MPGVRIVNVARGPLIDEAALIAALQSGHVHSAALDVFEIEPLPMDSPLRSMERCIFGS HNGSNTVDAVIRASHTAIERLSGFF" gene complement(<2031179..2031545) /locus_tag="RTM1035_09890" CDS complement(<2031179..2031545) /locus_tag="RTM1035_09890" /note="COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases" /codon_start=1 /transl_table=11 /product="phosphoglycerate dehydrogenase" /protein_id="jcventer:1101493006643_RTM1035_09890" /db_xref="CDD:30460" /translation="MKDVLVTCPPMLGQIDLFMEPAAEKGLRLHPAKVTQVMTEAELM DLLPGYDGWIIGDDPATRQVFSAGRAGRLRAAVKWGIGVDNVDFDACKDLGIPIINTP QMFGAEVADVATGLVIGLAR" gene complement(2031550..2032140) /locus_tag="RTM1035_09895" CDS complement(2031550..2032140) /locus_tag="RTM1035_09895" /note="COG1083 CMP-N-acetylneuraminic acid synthetase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_09895" /db_xref="CDD:31280" /translation="MDSLLALDEIDEVVINTDARHILAENGLVESDRVRIRDRKAELC GDTVSMNLILADDIAAVEAETYLMTHTTNPMLRPETIRAALAAYRAGVADGTADSLFS VNKIQTRFYRADASPVNHDPDNLVQTQDLEPWFEENSNLFIFSRDSFAATNARIGRKP ILHEMNKMEAVDIDTPEDWALAEAVASLHMQHQKTA" gene complement(2032190..2033161) /locus_tag="RTM1035_09900" CDS complement(2032190..2033161) /locus_tag="RTM1035_09900" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_09900" /db_xref="CDD:40622" /translation="MVQMLASIVIRTLNEAQHLDDLMVMIGAQQTNGLDVEVVLIDSG STDGTVEIAERHGCRVTTIKKSEFSFGRSLNRGCDHATGDLLVFISGHCVPVDTMWLQ NLCQPLIDGVASYSYGRQIGDDDSNYSERRIFAKYFPDVSAIPQDGFFCNNANSALLR SAWQKHPFDEALTGLEDMELAKRLVSAGHKIAYVADAPVFHHHQESWAQVRRRFEREA IALRSIMPEVHLSRFDVLRYVIRSVIGDWRAAALNNIRSTSRMDMLRYRWNQYVGSHK GNHEHRLLSQHAKERFFFPQVNEKAAQDDWLRPLRRTPPHESQQSKS" gene 2033435..2034202 /locus_tag="RTM1035_09905" CDS 2033435..2034202 /locus_tag="RTM1035_09905" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="Short-chain dehydrogenase/reductase SDR" /protein_id="jcventer:1101493006643_RTM1035_09905" /db_xref="CDD:40206" /translation="MTDAHYPDLKGRSVFVTGGGSGIGAALTEAFVAQGAKVAFVQRS DATAFCDSIADRHGARPLYLPCDITDRTALHQALEFARDAHGPVQVLVNNAANDQRHR AEDLDEAGWNASLAVNLSAYFFAIQGVVGQMRAAGGGSIINFSSISYMMGNAGYPAYV TANAGITGMTRALAREFGPERIRVNALVPGWVMTERQRTLWATPTDLAAHLEKQCLKE HLVPEDISGGTLFLASEASRMMTGQALVIDGGVVVTG" gene 2034199..2035083 /locus_tag="RTM1035_09910" CDS 2034199..2035083 /locus_tag="RTM1035_09910" /note="COG3386 Gluconolactonase" /codon_start=1 /transl_table=11 /product="Senescence marker protein-30 (SMP-30)" /protein_id="jcventer:1101493006643_RTM1035_09910" /db_xref="CDD:43678" /translation="MSELPQAQVFDRRICDLGEGAFWHPERRQFFWFDITGRRLMSRD QDDNQHWQFEQPVSAAGWIDADTLLIAASDHLLHFDIAKGTTTPIAPLDCAAGRLRPN DGRADPWGGFWIGTMGHGAEPQAGAIWRYYRGEMRRLFDKITIPNAICFAPDAGFACF TDTPGRIVYRQRLEATQGWPIGDPEPWLDLRAAARNPDGVVLDAQGRLWLAEWGSHRV AIYDRQAQFLGAVAVGAPHASCPAFGGDNLSVLHITTARQGMDTEALSKAPEAGMTYA VDLSAHACHGQAEHQVIL" gene complement(2035073..2035696) /locus_tag="RTM1035_09915" CDS complement(2035073..2035696) /locus_tag="RTM1035_09915" /note="COG2604 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_09915" /translation="MDLRFLRNHTVIGLNKIHLGLEKFGFEPRYLVAVNPKVVEQARE ALAALPAIRFIGARAAGHLEEGPRTFHVPILTPPVMFSTDICKGLREGGTVTHAALQV AYYMGFSKVVIIGMDHRFTYHGAPHEAHVMEGPDPNHFSPEYFRGQVWDNPDLERSEA SYKVAREVFEAAGRQIVDATLDGACPVFEKADYRAVFGLPRDHGPRE" gene complement(2035949..2036878) /locus_tag="RTM1035_09920" CDS complement(2035949..2036878) /locus_tag="RTM1035_09920" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_09920" /translation="MKAATHSQSIAIEIEAALDMLQAYKASVPAVPITDSFPSLLDQC EAMCQSFTGPEPIRTLHHFACSGGTLIAKCIAALPGVVLLNEIDPLSQIHLPENRRAP KFAPTDLFGALQISRREVNPTVVVDGFREATQTIVGGLASRGQSLVIRDHAHSHFCTQ IDPNSRPTLHEILATGRHPVVSLLTVRHPLDSFLSLHANGWLHFSPSTLETYSQRYAE FLDRHADLDLVRYEDFVAAPELTLEKICQIIALPYHASALELFTIIRLSGDSGRKGAQ IAERPRREVPMVIDAQRGSRDYKALCVRLGYEP" gene complement(2036875..2038176) /locus_tag="RTM1035_09925" CDS complement(2036875..2038176) /locus_tag="RTM1035_09925" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_09925" /translation="MSEHPVSKTKPRSFIHIGAGTGKRLAELQKHDPDKIVLVEADRN AAARLTQKSASASNVQVIRAALGKEEGDAELSLWNFSRLNSTQEPTPALYELFPGLIR KERQIVPVITPAQLLSEMGAVARPMALILEAPGNEMNILNACKADGMLDQIDQLEILA AEEAFYDGAVTRAELEAWLSDEGFDVTLRDEADADWTVLHLQADQKARALARAQTRIE TLRTSLASLETTLSETQAELKAAKERAELQEAALSEARAATEAKAKTLAERDIALKAA QERVVAIETALTEARAATEAKTKELAERDAALKAANDKISGIETSMVDLEKQRHSAVQ KRDEAVSTLDFQTRFQAMLQVDLENLRGRLEQSETQRQRQEDLLGKLTAKLSLAAEYL RQLPPSDQESLASDPAQKLSPPRRRTAGKKQKTKAGQGSKA" gene complement(2038408..2039610) /locus_tag="RTM1035_09930" CDS complement(2038408..2039610) /locus_tag="RTM1035_09930" /note="COG0183 Acetyl-CoA acetyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_09930" /translation="MKSSTNRASPHDKSAQGGAPSGAMSAPQVATRRVPHALIFVMQD VTPAFQEALHAAGFDVAPLDKMAVSQAIASDELPCALMWSDPTNCLARAIEEGTSIAE AIEGWRARAEEILTLLRKNRRHITLVESDLLTASNTDPAWEVLRKRLNIPKDVVLSQP GAQSALSRSVARLAVPQIESLREVLEELRASGISPANEGSALATLEAAAAVFEDLRAS QDELALLGAQVRLQVEEAEESSEERGLLQSQVMLVTQEMQRLTAVETAFEAQKLERDD DQEELALLREQVQLQLREAHRASEESAALREQLNRLTQDIKRLRTAQTALESRHVQAL RDKDQALAQAAQDLGHAMTLRAELEAQNAKLGHDVEGLTTMLAMVYESTSWRVTAPLR GVRRLVSK" gene complement(2039744..2041114) /locus_tag="RTM1035_09935" CDS complement(2039744..2041114) /locus_tag="RTM1035_09935" /note="COG0836 Mannose-1-phosphate guanylyltransferase" /codon_start=1 /transl_table=11 /product="Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase" /protein_id="jcventer:1101493006643_RTM1035_09935" /db_xref="CDD:31178" /translation="MSRKSYPKQFVALLGDVTLFQASAQRLSGPEFAAPMVLTNADFR FIVGEQLDDIGINPGAVLIEPSGRNTAPAVLAAALWQARQDPEALMLVAPSDHVVPDP EAFRQAVAAGVGPAQAGQLVTFGIKPTHAETGYGYLELDGVPGDLAPRPIGLKRFVEK PNAEAAAAMLAEGTYLWNAGIFLFKAATILDAFRAHAPQLLAPVEAAVEKTTPDLGFY RLDPEAWGEAEDISIDYAVMEKARNLTVIPFAAGWSDLGGWDAVWRETGPDARGVATS GHATAIDCDNTLLRSEDAGLEVVGIGLDDIITVAMSDAVLVAHVSRAQDVKQAVAALK AKGRKQAESFPKDHRPWGWFESLVIGERFQVKRIHVHPGAALSLQSHHHRSEHWIVVE GTAKVTVDDVVKLVSENQSVYIPLGAVHRMENPGKVPMVLIEVQTGSYLGEDDIIRYE DIYARG" gene complement(2041399..2042673) /locus_tag="RTM1035_09940" CDS complement(2041399..2042673) /locus_tag="RTM1035_09940" /note="COG2262 GTPases" /codon_start=1 /transl_table=11 /product="GTP-binding protein HflX" /protein_id="jcventer:1101493006643_RTM1035_09940" /db_xref="CDD:32443" /translation="MDHARPITRAWVIHPEIDGANRARDPALALEEAVALAHALPDID VVGADTVRLRKPDAGRLFGKGKLEELHQAMEAAEVELVLVDGPVTPVQQRNLEKAWGV KLLDRTGLILEIFSDRAATREGVLQVEMAALSYQRTRLVRAWTHLERQRGGLGFVGGP GETQIEADRRAIDDQLVRLRRQLEKVAKTRTLHRAARAKVPFPVVALVGYTNAGKSTL FNRLTGADVMAKDMLFATLDPTMRRVNLPEGGPEVILSDTVGFISDLPTELVAAFRAT LEEVLSADLICHVRDISHPETVSQSRDVATILESLGVSDKTPQIEIWNKIDRLPEDAR AAAVTQAARQEDVIAISAISGQGLSDLISAIGDKLSDVTHLTEVHLRFAEGRKRAWLF EKELVEAETQTEDGFDLTVRWTARQEARFRAL" gene complement(2042673..2042912) /gene="hfq" /locus_tag="RTM1035_09945" CDS complement(2042673..2042912) /gene="hfq" /locus_tag="RTM1035_09945" /note="COG1923 Uncharacterized host factor I protein" /codon_start=1 /transl_table=11 /product="RNA-binding protein Hfq" /protein_id="jcventer:1101493006643_RTM1035_09945" /db_xref="CDD:32106" /translation="MASDRQNLQDAFLNQVRKTKIPVTVFLINGVKLQGVITWFDNFC ILLRRDGQSQLVYKHAVSTIMPSQPVNLYDGDDAN" gene complement(2043056..2044576) /locus_tag="RTM1035_09950" CDS complement(2043056..2044576) /locus_tag="RTM1035_09950" /note="COG0168 Trk-type K+ transport systems, membrane components" /codon_start=1 /transl_table=11 /product="Trk system potassium uptake protein TrkH" /protein_id="jcventer:1101493006643_RTM1035_09950" /db_xref="CDD:30517" /translation="MIARLLTFPLILILAGIAALMMYLPAIDAGMRGFSGVGKAFAFS GTIGFALVITIGLALSGRSDQRMSDTQNLMSLLLAYVLLPVFLAIPFYSGVRNTTFLN AYFEMVSSFTTTGATLFGTPGRLVDSLHLWRALVGWGGGLLLWISASAVLAPLNLGGF EVTARGEPGQDETVLGRFERASPAKRLAQSTRVLAPVYIGLTAALWICLLVGGERAFV AAVHAMSTMATSGISSIGGLQNGTSGFAGEFAVFLFFFFSLSRLTFSSDTITSMRPGV VNDPEFRLGVVLLIGVPLILFLRHWIATLGVEDTSDWRLALRALWGAVFTVLSFLSTT GFESADWQEARDWSGLGTPGLILLGLSLVGGGVATTAGGVKLLRVYALYLHARRETER LVHPSSVGRATGVGRRIRRQGAYIAWIFFMLFAMSLTFVTALLALAGQGFDAALILAI SGLSTTGPLILTASDTPIRLLELSDGAKMIYAMAMVLGRLETLALIALLNPSIWRD" gene complement(2044581..2045960) /gene="trkA" /locus_tag="RTM1035_09955" CDS complement(2044581..2045960) /gene="trkA" /locus_tag="RTM1035_09955" /note="COG0569 K+ transport systems, NAD-binding component" /codon_start=1 /transl_table=11 /product="potassium transporter peripheral membrane component" /protein_id="jcventer:1101493006643_RTM1035_09955" /db_xref="CDD:30915" /translation="MKVIICGAGQVGWQIARHLSGERNDVTVVDNNPDLVRRATDTLD VQGITGFASYPDVLDRAGARDADMIIAATYSDEVNMVTCQVAHSVFGISRKIARLRSQ SYLDAIYSDLYRRDHMPIDVVISPEREVAQAALQRLASPASFDTELFMGGQAQLMGIR LEEDCPVLNTPLRQLSDLFSTLRVVVLAVRREGRLFAPEAGDQLFAGDECYLFAPIED VPRTLEVFGKSQKKQERVVIIGGGNIGLAVAQALETRPGGRVRAKVIEKSRPQAERAA DALERTIVLNGDGLNSALLAEAGIARADAVLVVTDDDKTNMLAAVRAKSEGCPFAVAL INDPTMVPLLESLGIDAYINPRATTVSSILRHIRHGKVRGVYSIGDAEGEVIEAEVMS TSSIAGAAIRDIDFPEGVLVGAVRKGGKIHKPAGGLRVEAGDVIVIFAMAADVAAVEQ LLQVSIDFF" gene complement(2046031..2046546) /locus_tag="RTM1035_09960" CDS complement(2046031..2046546) /locus_tag="RTM1035_09960" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_09960" /translation="MRIGYVIAEGRGETDLLLHDVARAARARGLRLCGTVQVNTNCGA DRPCDMDVEVLPDGPVIRISQSLGPGARGCRLDPSALELAVAAAEARLAEGCDLLIVN KFGKHEAEGRGFRTLIAEALSQNVPVLVGANRLNAPHLVAFSDGIAEALSPDLVHILD WFDRTAREACA" gene complement(2046563..2048176) /locus_tag="RTM1035_09965" CDS complement(2046563..2048176) /locus_tag="RTM1035_09965" /note="COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily" /codon_start=1 /transl_table=11 /product="beta-lactamase-like protein" /protein_id="jcventer:1101493006643_RTM1035_09965" /db_xref="CDD:30940" /translation="MNAYVYGYGKPGKERLILVDLGVTFPDMDGTPGVDLILPDISWL EARKGQLEAIFITHAHEDHVGAVAHYYARLGAPIHARAFTANIARRKMQEHGNPEKAV HIASTWPATVKAGPFTVGFVPISHSIPESSGLVIDSAGGRIVHTGDFKIDVNPVVGEP FDRDLWASLSEPGVKALVCDSTNVFSHHEGRSESTVGGPITDLVAASKGLFVCTTFAS NVARVKSLAEAGVRAGRSVCLMGRAMQRMIEAAQETGVLTGFPKTISPEEAGNVPRDS LMLIVTGSQGERRAASAQLANGKYNGITLKEGDTFLFSSKTIPGNERGVIRIINQFSE MGVDVIEGDDRYHVSGHANRPDLDEMHKLIKPQMVIPMHGEHRHLREHVKLANANRLK GVLAVNGMMIDLSGNAPKVAEYIETGRTYLDGSVQVGAMDGVVRDRIRMALNGHVMVN VILDEEDEPLGDPWVEIMGLAETGRSNAPLVDVLEEDLSQFMGRAGAKMLTNDDKLEE GLRRTARQSTQTEIGKRPEVTVVISRLTA" gene complement(2048237..2049007) /locus_tag="RTM1035_09970" CDS complement(2048237..2049007) /locus_tag="RTM1035_09970" /note="COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor" /codon_start=1 /transl_table=11 /product="transcriptional activator, Baf family protein" /protein_id="jcventer:1101493006643_RTM1035_09970" /db_xref="CDD:31710" /translation="MLLAIDCGNTNTVFSIWDGQTFLCTLRTATDHQRTADQYFVWFK TLLHHYGIKADISGVIISSTVPRVVFNLRVFSDRYFNCRPLVVGKPECRLPVDVRVDT GTQVGPDRLVNTVAGFDLYGGDLIVVDFGTATTFDVVDSDGAYIGGVIAPGVNLSLQA LHEAAAALPHIDVTRPERVIGTNTVDCMQSGVFWGYVGLINGLCDRIKAERGRTMTVI ATGGLAPLFQQGTDVFDMFEDNLTMHGLTVIHAYNKEG" gene complement(2049026..2049784) /locus_tag="RTM1035_09975" CDS complement(2049026..2049784) /locus_tag="RTM1035_09975" /note="COG0340 Biotin-(acetyl-CoA carboxylase) ligase" /codon_start=1 /transl_table=11 /product="biotin--acetyl-CoA-carboxylase ligase" /protein_id="jcventer:1101493006643_RTM1035_09975" /db_xref="CDD:30688" /translation="MDQGSDWPQGYGRRVLASVDSTNAEAARLAPHLAGPEWILAHQQ TAARGRRGRAWANPAGNFAATLVMRPTESPDRVALRSFVASLALFDALVAATGRAEVF ALKWPNDVLLNGGKLAGILLESAGAGGSLSHFAIGIGVNLHSAPEVSEVEPGALRPVS LLSETGIAIDPEAFLDLLAPAYARAEAQFVTYGFAPIRTAWLARAARLGEVITARTTR EVYEGRFETVDEAGNLVLLTAQGRQAIAAAEVFF" gene complement(2049824..2051218) /locus_tag="RTM1035_09980" CDS complement(2049824..2051218) /locus_tag="RTM1035_09980" /EC_number="1.1.1.44" /note="COG0362 6-phosphogluconate dehydrogenase" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydrogenase" /protein_id="jcventer:1101493006643_RTM1035_09980" /db_xref="CDD:30711" /translation="MAQIGIYGLGTMGSALALNIAEHGFDVAVTNREVDWIAPFMTEA GDLAVRLHPHEQLEAFVAALNTPRVILFMIPSGPPMDAMLAQITPLLSPGDTVIDGGN ADFHDTRRRAAQLAERDLHFVGLGVSGGEAGARQGPSMMLGGSDHSWAQLEPILTAIA ARYDGIPCVARLGPDGAGHFVKTVHNGIEYADMQVIAEIYSLLRNGAALPPAEIGALF AAWDLGPLKSYLVEITARLLTYTDPETGHPMVDVIKDAAGQKGTGRWTVIEALRLGQS ASMIEAAVGARGWSSEKPTRQRAEAILGGAVGAFDDTPEVLAEAFLAARLLTYAQGFR ILAAASDAHGWGLDLATIARIWRAGCIIRSALLDDIADAFDRDLPQGELILAPEIAQT FARCLPALRQVVCSAVHGGHPVPALSAGLAWYDSMRLGHGSANIIQAQRDMFGRHGFE RLGRAGLHHGPWWD" gene complement(2051308..2052234) /locus_tag="RTM1035_09985" CDS complement(2051308..2052234) /locus_tag="RTM1035_09985" /EC_number="2.1.3.3" /note="COG0078 Ornithine carbamoyltransferase" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase" /protein_id="jcventer:1101493006643_RTM1035_09985" /db_xref="CDD:30427" /translation="MTHFLDIHKTTETDLRAMIDQARRMKEARQGRPRGTPDDDQPLA GRMVALIFEKPSTRTRVSFDMGVRQMGGQSMVLSGADMQLGHGETIADTARVMSRYVD LIMIRTFDESVLLEMAEHADVPVINGLTDRTHPCQIMADILTYEEHRGPIKGKKVVWS GDGNNVCASMLHAAGQFGFDLTFTGPMQLDPEPEFIGLARKAGSTITIERDPFKAVDG ADLVVTDTWVSMHDSQSTKERRHNMLRPYQVNDKLMAAAKPDALFMHCLPAHRGEEVT SEVMDGPQSVIFDEAENRLHAQKAVMRWCLGV" gene complement(2052311..2053546) /locus_tag="RTM1035_09990" CDS complement(2052311..2053546) /locus_tag="RTM1035_09990" /note="COG4992 Ornithine/acetylornithine aminotransferase" /codon_start=1 /transl_table=11 /product="acetylornithine and succinylornithine aminotransferases" /protein_id="jcventer:1101493006643_RTM1035_09990" /db_xref="CDD:34597" /translation="MIDSAPPMRHSKGLFDKEAAMIPSILPTYNRAPLSFVKGEGAWL IEADGRRFLDLGAGIAVNSLGHAHPKLVAALTKQAEALWHTSNLYQIPAQQELADRLV AATFADTVFFTNSGTEACELAVKMARKHFYEAGQPERTDIIAFEGSFHGRSSAGIAAA GSEKMTKGFGPLLPGFKHVAWGDHDGLHAAIDDHTAAILIEPVQGEGGIRPLPDQCLK GLRALCDERGILLILDEVQCGVGRTGRLFAHEWAGVTPDIMMVAKGIGGGFPLGAVLA TEHAASGMTAGTHGSTYGGNPLGCAVGCAVMSEIATPEFLAEVNRKAAFLRQRLEGLV AAHPTVFEAVRGMGLMLGLKCKVPNAEVVQAGYAALVATVPAADNVLRLLPPLTITDD EIAEAVTRLDAAATALETA" gene complement(2053673..2054932) /locus_tag="RTM1035_09995" CDS complement(2053673..2054932) /locus_tag="RTM1035_09995" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_09995" /translation="MHQRRIPEWLRHAPTPSVRGFATLAGTEAMARGILISVMPLEMY RALRDAALVSEIYFMVGLLSLATGLMVPFVSRFMPRRWIYVTGCAMFAGGAAMGAQGG ALGMIAALAMITAATVTVFVCFNAYVLDFIAKSDLGRCETSRMFYSALGWTVGPFLGV TLLGIWRPLPFMIAALAALSMMALFLYLRLGNGKLITRARRPAPNPLAWMPRFFAQPR LVAGWIFAVIRSCGWWAYVVYLPIFAVQQGLGEDLGGMLLSASNGMLFLTPFMLRWMQ RRSIRHAVRAGFLVSGLLFVFAAILSGLPWVTVASLAVASVFLVLLDVSAGLPFLMAV KPSERTEMSAIYASFRDVSGILTPGAAWLVLLVAPLPGIFAVTGVALVGCWHLARQLH PRLGAARVAIEPGPKLDISLPLTRKTG" gene 2055096..2055989 /locus_tag="RTM1035_10000" CDS 2055096..2055989 /locus_tag="RTM1035_10000" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10000" /translation="MFIPRASNPGLAALLTVLAAALLAGTTLLAKALGTDTLGPPLHP LQISHGRFLFALLAISVTVALVRPRFTRPDLRTHVKRSGLGWGGVTLMFAAAAYIPLS DATAISFLNPVLGMILAIPLLGERVGPVRWAAAVIALTGAAILIRPGSGVVETGALLA LGAALCLGAELIFLKRLSGREGPWQILLVNNAIGLSIATLAVIWVWAPPTAAQWAALA ALGVLMALAQMAFVNAMARGDASYVAPFFYTALIFAGLYDGLVFGVWPDITSITGAAV ILCGAGLLIWREGRRRRVPVT" gene 2056049..2056441 /locus_tag="RTM1035_10005" CDS 2056049..2056441 /locus_tag="RTM1035_10005" /note="COG2190 Phosphotransferase system IIA components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10005" /translation="MPLIILLPMVILGIAGVAVLLHVLGLSRRAILADDAAARAAWLR EFPEDTPTRIRRCHTHNAALIETARGLGVVWPMGADTTARYLKGARVRQGKTGLTLDL PDYTAPRIHLRLSPDEAKTWHRLLESCA" gene 2056438..2057388 /locus_tag="RTM1035_10010" CDS 2056438..2057388 /locus_tag="RTM1035_10010" /note="COG3000 Sterol desaturase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10010" /db_xref="CDD:32818" /translation="MTDALTYPDVVTWAVPFFIAAILAELLWIVIRGRGGRYETRDAL TSLLMGAGNVAEGIVLGFVAYGFFMVLWQITPLDLGHSIWVILLCFVLDDLRYYWVHR FGHRIRWVWASHVNHHSSQHYNLTTALRQTWTGTFTFMMIVRAPLILLGFHPAMVLFV GGLNLIYQFWIHTEAIGRLPRWVEAVMNTPSHHRVHHGRNPRYLDCNYAGVFIIWDKM FGTFVPELDREKVDYGLVHNLGTFNPLRVALHEWIGIWRDATQPGLTWRERLNYCLMP PGWSHDNSRGTSQTIKARYLATHPEEAGTPGLPSPGTPIR" gene complement(2057496..2058278) /locus_tag="RTM1035_10015" CDS complement(2057496..2058278) /locus_tag="RTM1035_10015" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10015" /db_xref="CDD:31750" /translation="MSQRFDADLTACADLVRRADPDRFMAAMAAPVAARSVLFPVYAF NVEVARAPWVTQEPMIAEMRLQWWADALDEIAAGGLVRRHEVVTPLAHALDAPGAALL ADLVEARRWDIARDPFEDAAQFTQYIETTSGNLMQAAVRALGPAAPDVARDAGYALGL ANWFRAIPALEAAGRKPLVDGRPEAVQALAKDGLVRLRRARAARGQVSHTAVAAFLPL WLAGPLLRQAARDPRAVAEGRLAVAPARARLSLMVRALSGRW" gene complement(2058275..2059894) /locus_tag="RTM1035_10020" CDS complement(2058275..2059894) /locus_tag="RTM1035_10020" /EC_number="2.3.3.13" /note="COG0119 Isopropylmalate/homocitrate/citramalate synthases" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="jcventer:1101493006643_RTM1035_10020" /db_xref="CDD:30468" /translation="MTKHRLYLYDTTLRDGQQTQGVSFATQEKIQIAQALDRLGVDYI EGGWPGANPTDSAFFDDAPKTRATMTAFGMTKRAGRSAENDDVLAAVLNAGTSAVCLV GKTHDFHVTAALGIGLADNTDNIAKSIAHLVAEGREALFDAEHFFDGYTANPAYALEC LRAALEAGARWIVLCDTNGGTLPPQIGRIVSEVIAAGIPGDRLGIHTHDDTGNAVAGS LAAVDAGVRQIQGTLNGLGERCGNANLTTLIPTLLLKEPYASRYETGVSLEGLRSLTA ISRQLDEILNRVPLRQAAYVGASAFAHKAGLHASAILKDPSTYEHVDPACVGNQRIIP MSNQAGQSNLRQRLSEAGIVVEPGDPALARLLETIKAREEEGYTYDSAQASFEILARK ELGQMPAFFEVKRYKVTVERRKNKYDRMVSLSEAVVVVKVDGDKKLSVSESMDDHGCD RGPVNALAKALAKDLGRYQGQIDDMRLVDFKVRITQGGTEAATRVIIDSEDGQGRRWS TVGVSPNIVDASFEALLDAINWKLLHGQGAA" gene complement(2060098..2061501) /locus_tag="RTM1035_10025" CDS complement(2060098..2061501) /locus_tag="RTM1035_10025" /note="COG0215 Cysteinyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="cysteinyl-tRNA synthetase" /protein_id="jcventer:1101493006643_RTM1035_10025" /db_xref="CDD:30564" /translation="MTTIKLHNTRTRRKEEFTPLDKDNVRMYVCGPTVYDRAHLGNAR PVVVFDVLYRLLRHVYGAEHVTYVRNFTDVDDKINARAAESGRSIGEITAETTQWFLD DMAALGALEPDHMPRATQYIPQMVAMIEGLIAKGHAYEAEGHVLFAVDSWREGYGKLS GRSVDDMIAGARVEVAPYKRNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAH ELLGESFDIHGGGNDLMFPHHENEIAQSCCAHPEGEFAKVWLHNEMLQVEGKKMSKSL GNFFTVRDLLDQGIPGEVIRFVFLSTHYRKPMDWTAEKAEEAEKTLRKWRGLVQGAET GQVQEIELAPLYDDLNTHGVIQRLRAMARAIELGIDTPEGTVTPGDFLATARMLGLLE DGMGDWIAQHADDLSDLSLTLDKERMKAKQTKDFTIVDALKSALTDAGVEVRMTKDGV DLIPGPNFDPAKLEALK" gene 2061727..2061846 /locus_tag="RTM1035_10030" CDS 2061727..2061846 /locus_tag="RTM1035_10030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10030" /translation="MLFDYLLENIMHPRSKIALVVRTIGAERGRAARGGPVAA" gene 2061892..2063430 /locus_tag="RTM1035_10035" CDS 2061892..2063430 /locus_tag="RTM1035_10035" /note="COG5598 Trimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase family protein" /protein_id="jcventer:1101493006643_RTM1035_10035" /db_xref="CDD:46144" /translation="MTDTITRRAGGRAARREARSNPLAANLRPVHPGQEGGTYHPLSK AQMDRIHHAVLDALEQIGLADAPPSGVAYLTGAGAILGSDGRIRFPRALIEDTIAKAN REITLFGRDPRHDMLLQGNRVHYGTAGAAVHVVEVNTRTYRESTVQDLHDAARIADQL DNIHFVQRPMVCRDIVDNREMDLNTLYACCAGTTKHVGTSFTEPGFVADAIEMLHLIA GGEDKWRERPFVSNSNCFVVPPMKFATESCLVMEECIRLGMPVLLLSAGQAGATAPAP IAGAIVQATAECLAGLVYVNAVKPGFPAIFGTWPFVSDLRTGAMSGGSGEQALLTAGC AQMHKYYGLPGGAAAGIADAKLPDMQAGWEQATSNVMAGLSGLNMVYEAAGMHASLLG FCLESLILGDDLIGQALRCTRGIEVDEDTLSLEVIRATCIGGPGHYLGADQTLGRMQT DYLYPCIANRSSPKEWDELGKPDLIAKATEKKLKILSERAAARFDPVTDAAIRERFKI HLPA" gene complement(2063562..2065274) /locus_tag="RTM1035_10040" CDS complement(2063562..2065274) /locus_tag="RTM1035_10040" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="Transducer-like protein, TlpC" /protein_id="jcventer:1101493006643_RTM1035_10040" /db_xref="CDD:34333" /translation="MNPAMRTLLSNAYIDCLRKATGTIEAIFLRAGQGLGTSVEDLMQ LREVLARLSVVLGPEETQTLRMLCLNSVEHSAEISGDVQAFVQMAETLRAGIRKIQSN VSHLSVVIRTMSASAPISRILGKSLTRQESKIDEFSIELARIAASADEQLKSLQAHIE IIEVEMADLDLISLNLSRDMKDRVMPALDGLEAQISEIQLDRHELATGNAVIEAGMRD IFAEISAIVGELQTGDSVRQRLEHVEVIARASLGAALAQERPEASDGLGYLAICQAEA SRDEMARDVASVLVRLAAIRRKSDQVLGAAEQVYLDPNDTQRKRVSAMITCANRLSSA LQSSQSNLDVLHRIGRTTQDHIGSIQTIAAEMGLLDHHIRMLGLNTFIVCCNMGSEAG ALQELSRQVLSLTKISNEIFDQIATTTRALAATTMPDVSSADDKMSRTVGFAQDISER LNATDQAVLATKQGCAIKGDALKIALHASETSLSSLVAAKAELGTFITGFNGLISNEN ANRSLYDVQPSEQDRLSQLYAIYTMDAEREIHDRIFEGEATPASASEIAVQAPGDELA DIFF" gene complement(2065280..2066386) /locus_tag="RTM1035_10045" CDS complement(2065280..2066386) /locus_tag="RTM1035_10045" /note="COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain" /codon_start=1 /transl_table=11 /product="chemotaxis methylesterase, CheB1" /protein_id="jcventer:1101493006643_RTM1035_10045" /db_xref="CDD:32383" /translation="MLDIACKPQISVLIVDDSASARAMLMRIVETDPTLKLFGTAADA FIAVSKMQSGLPDVMLLDMELPRMSGLEFLRKIMAQRPIPVVICSSHAAAGSDLALTA LASGAVEVVSKPAPKTDADFQESAIAICDAIHAAAESGHKAARRVTPPRETGTKLLAD ALIPPARPKNIAHTSPIVCIGASTGGTEAIRSVLVDLPVTCPPVVIVQHMPAGFTTAF SRRLNGLCRVNVKEAADGDLCNPGEVLIAPGNFHMMLVRQGRGYGVKIVDGPYICRHR PSVDILFRSAAQTAGHNALGIILTGMGDDGARSLREMREAGATTLAQNEETCVVFGMP REAIRMGAATRVVALSEVPGAISAFANTHQLRAR" gene complement(2066393..2067235) /locus_tag="RTM1035_10050" CDS complement(2066393..2067235) /locus_tag="RTM1035_10050" /note="COG1352 Methylase of chemotaxis methyl-accepting proteins" /codon_start=1 /transl_table=11 /product="Chemotaxis methyltransferase, CheR2" /protein_id="jcventer:1101493006643_RTM1035_10050" /db_xref="CDD:47477" /translation="MSLSRAKSYHDHFAEVISRETGIKLPSGKKVMIESRLRRRVQSL GFNSLEDYYRHLFEDGGFGAERDDVIDLITTNKTDFFREPAHFRCLMNDMLPEILRRK QRLNKPVDVKFWSAACSDGSEAYTTAMLLEEAVRNGAGFQYAILGTDISTRMVEAAKR AIYTTEALAPVPSALRKRYVMQGHSEDMRGMARIVPALRSKANFTHLNLMDDTYPVDQ DVDIIFLRNVLIYFEPEDQARVIARLARHLTPQGYLVVGHSESMTVKQPNLKQLATAV FQKE" gene complement(2067232..2067795) /locus_tag="RTM1035_10055" CDS complement(2067232..2067795) /locus_tag="RTM1035_10055" /note="COG0835 Chemotaxis signal transduction protein" /codon_start=1 /transl_table=11 /product="Chemotaxis protein, CheW3" /protein_id="jcventer:1101493006643_RTM1035_10055" /db_xref="CDD:29682" /translation="MISIMALHRAMQREAGAMNENTQVVTFQSSGSLFAVPVNRVRQI LDTQPIAPLPNSPAELLGLIDVRGESIAVTDLSELLSRGPTEDTSETRILILSLVNGQ HGATVGLKTERVIEVTELDAGGIKSPADAGITTWDENVLTGIGRRNGTFVCILNLEKL FSEGVRRKTPEFASQRAIETSEEFTLT" gene complement(2067755..2069410) /locus_tag="RTM1035_10060" CDS complement(2067755..2069410) /locus_tag="RTM1035_10060" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="methyl accepting chemotaxis protein" /protein_id="jcventer:1101493006643_RTM1035_10060" /db_xref="CDD:31182" /translation="MRLTIKAKLTATFLLVLGMAGCAMILALKDMAEFNHSLNNIMNE NVARVMASEALITEQVQMQRDIRSYLLADSALDKRDLQKTIKAAIDKKVVLFDKLFAI ASPEGRTLLDDYTKVEAELLSVYAKAMSMKDMNQQSEAASYLQSEGVQRGREMQGVLD KISKMNTDGVAEVVVQTNEQFNTSRNILMLLMSASIVIGVGAGAWVTLSISKGLKSAI AITGRVAAGDLTRTVAIRGNDEVSDLLQSVNTMVAKLRDVVGDVTSAIRNVASGSQQM AATSEELSQGATEQASSTEEASSSVEQMSANIKQSAENAAETERMAVKSAQDARESGK AVAEAVTAMQDIANRIIVVQEIARQTDLLALNAAVEAARAGEHGRGFAVVAAEVRKLA ERSQTAAAEISALSATTVRSAENAGSMLQGLVPDIERTSVLVSEISSASQELAAGATQ VNLAIQQLDKVTQENTSAAEELSATAEELSTQSEQLQVAVSYFVLAEKAAAVQENPVP ARPATRAVQASSSKSSRTSGGFSFNHGANKDDLDHGFASRDAA" gene complement(2069429..2069911) /locus_tag="RTM1035_10065" CDS complement(2069429..2069911) /locus_tag="RTM1035_10065" /note="COG0835 Chemotaxis signal transduction protein" /codon_start=1 /transl_table=11 /product="Chemotaxis protein, CheW2" /protein_id="jcventer:1101493006643_RTM1035_10065" /db_xref="CDD:29682" /translation="MTKDLNRSAKTLTVVALRLGERIFAIETSAVLEILSPIPVTRVP HGGAFAQGVINVRGGVVPLADLRVIFSIPTPPVDENTRVLVLQMPIENELITVGVSAD EVREVVTIDCDRIEPLPPTGTIWPADYVRGLVQGPEGITILPDLNNIFAAHIATANAL " gene complement(2069908..2071830) /locus_tag="RTM1035_10070" CDS complement(2069908..2071830) /locus_tag="RTM1035_10070" /note="COG0643 Chemotaxis protein histidine kinase and related kinases" /codon_start=1 /transl_table=11 /product="Chemotaxis histidine protein kinase" /protein_id="jcventer:1101493006643_RTM1035_10070" /db_xref="CDD:30988" /translation="MDNDISAVFLEEARELLESLEQGLLRLQADPNNMDLINAAFRDL HTIKGSGAMFGFTDLAAFIHKFETAFEKIRSGEIKVSASLIRVALRAADEIKGYLAGE AALTPARQAILDDLEQAVSPDKALGEPLAETSSDAGWRLDFRLASDALALGARPEVLL DELRGLGATNLVADIRRIPSLDRIEAQACLLGWSMDLPAAAPEDDIKSVFMFHEGNME FNLVNLAAPVADVAVAAQPTEAAPTGPQPAQQSATMRVPAERLDELMDQVGELVIAEA RLSALANSSKDPSIMAAAEDIQRLSARMRDTTMSIRMVPISSIIGRFRRLVHDLSEGL GKTVNFVVTGADTELDKTVIERLGDPLVHIIRNAIDHGLETDEARAAAGKPDCGTIEL SAEHLGAEVVISVKDNGRGLDRNKLRARAIDQGLLTPDATPSEAELFALILEPGFSTA AKVTELSGRGVGMDVVKRTVEGLRGRIVISSEPGHGTTLTLRLPLTLSIIDGLLVEVG GDRYIIPMAAVQEIVELPASDAGADTISSFLQIRDSLVPFLRLRTLLDCAEERNTLQN VIVVSAASLRVGLAVDRILGTNQTVVKQMSRLHAGVKSISGATILGDGSVALVLEVGN LVELARTDLRKIEKAA" gene complement(2071830..2072192) /locus_tag="RTM1035_10075" CDS complement(2071830..2072192) /locus_tag="RTM1035_10075" /note="COG0784 FOG: CheY-like receiver" /codon_start=1 /transl_table=11 /product="Chemotaxis response regulator, CheY3" /protein_id="jcventer:1101493006643_RTM1035_10075" /db_xref="CDD:29071" /translation="MKTVLAVDDSPSIRQMVGLTLRGAGYNVIEAVDGQDALEKATTL KIDAVLTDQNMPNLDGLGFIRAFRAHPSSQGIPVIFLSTDSADALKQEARSVGALGWM VKPFSQAQLLSVIQKVLG" gene complement(2072189..2072512) /locus_tag="RTM1035_10080" CDS complement(2072189..2072512) /locus_tag="RTM1035_10080" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10080" /translation="MTKKLPLTGDLKIAAADDLAKQLSTALISGDVTLCTKKLVSIDA ATIQVLVSAFVTAQGAAHRFAVDMPAQSVLETAFDRLGLLPLLVVENGVLVGIRDAQI VQVAA" gene 2073051..2074745 /locus_tag="RTM1035_10085" CDS 2073051..2074745 /locus_tag="RTM1035_10085" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="methyl accepting chemotaxis protein" /protein_id="jcventer:1101493006643_RTM1035_10085" /db_xref="CDD:31182" /translation="MRLSIKAKLAATYIFIFALFGASVVMALRDLRAADQELQDIMRL EVTELGVINEMFEAKLMVLTGVASYLIGLPNAPTGHLDKIKAGVVAQASIVDDKIVEL RGMAKSPKLVAELEAFEDLHKRAFAMNTRVISLEAAGNGDAANTLFHTDLMDMGVEIR AALQEMRETIIGNLDVRAAEATEAYETAKFNLILMLILSLLVGLAAATVITLSISRRV AKAADLAHGISKGDLRHTLDVRGRDEVSTLQASINDMVLRLRDIVSDVTNSVRNVSSG AAQLAETSEELARGASDQAAATEEASSAVEQMTANIKQSAENSQTTEGIAIKSAADAR TSGRAVADAVSAMQTIADRIMIVQEIARQTDLLALNAAVEAARAGEHGRGFAVVAAEV RKLAERSQTAAAEISSLSATTVSTAVGAGTMLAELVPNIERTSGLVTEISDASRELSS GSSQIALSIQQLDLVTQTNNAASEELSSSATQLASLADELTVAMGFFKVVEQPVSEIR RETRSTATNSVIPLKRGKAASQAKPTKATKSEGGFEFDLGSMGDDLDARFARKESA" gene complement(2074795..2076033) /locus_tag="RTM1035_10090" CDS complement(2074795..2076033) /locus_tag="RTM1035_10090" /note="COG1748 Saccharopine dehydrogenase and related proteins" /codon_start=1 /transl_table=11 /product="saccharopine dehydrogenase family protein" /protein_id="jcventer:1101493006643_RTM1035_10090" /db_xref="CDD:31934" /translation="MKRNVLIIGAGGVAQVVAHKCAQNNDILGDLHIASRTQAKCDAI IASVHEKSAMKVPGTFASHAIDAMDSAAVAALIRQTGAEIVINVGSPFVNMSVLDACL ETGAAYIDTAIHEDPAKICETPPWYGNYEWKKRDLCAQNGVTAILGIGFDPGVVNAFA RFAADEYMDKVTSIDIVDINAGSHGRYFATNFDPEINFREFTGTVYSWQDGAWQENSM FEVGRDWDLPVVGTCRAYLSGHDEVHSLAANYPEADVRFWMGFGEHYINVFTVLKNLG LLSEHPVKTAEGLEVVPLKVVKAVLPDPASLAPNYTGKTCIGDLVKGTKDGAPVEVFV YNVADHKDAFEEVGSQGISYTAGVPPVAAAILIAQGDWDVGAMRNVEELDPKPYFPVL DRLGLPTRVQINGVDKAWNE" gene complement(2076106..2077200) /locus_tag="RTM1035_10095" CDS complement(2076106..2077200) /locus_tag="RTM1035_10095" /note="COG0019 Diaminopimelate decarboxylase" /codon_start=1 /transl_table=11 /product="putative carboxynorspermidine decarboxylase protein" /protein_id="jcventer:1101493006643_RTM1035_10095" /db_xref="CDD:30369" /translation="MIPTPYYLIDEDRLLQNMRKIERLRALSGAKALLALKCFATWSA FPTMKPYMDGTTSSSLFELRLGREKFGQETHAYSVAWSDAEIEEAVSYADKIIFNTVG QLQRYDSQSAGIERGLRLNPRFSTSSFDLADPARPFSRLGEWEVNKILGVIDRISGVM IHYNCENRDFDLFDQQLTRIEDEFGPVLERLQWVSLGGGIHFTGDDYPLEELAARLKQ FAEKFDVQVYLEPGEAAITGTTTLEVTVLDLLDNGKDLAIVDSSTEAHMLDLLIYRES AKLPQDGAHTYQICGKSCLAGDIFGEARFAAPLSIGDRISIGDAAGYTMVKKNWFNGV NMPAIAIRRADGRIDVIRSFTFEDFAASLS" gene 2077374..2078075 /locus_tag="RTM1035_10100" CDS 2077374..2078075 /locus_tag="RTM1035_10100" /EC_number="3.4.21.88" /note="COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)" /codon_start=1 /transl_table=11 /product="LexA repressor" /protein_id="jcventer:1101493006643_RTM1035_10100" /db_xref="CDD:32157" /translation="MLTKKQLDLLEFIQKRVQRDGVPPSFDEMKEALDLRSKSGIHRL ITALEERGFIRRLAHRARALEIVRLPESLGGEARHSFSPRVIDGDLSDAPRPANAQPV EVAHAFEVPLMGRIAAGVPIEAIAHAQHNVSVPSNMIRGAANHYALEVRGDSMIEAGI NDGDVVIIRETSVADNGDIVVALIEDQEATLKRFYRRGNAIALEAANPAYETRLFPED QVRVQGRLVGLIRSY" gene complement(2078069..2080087) /locus_tag="RTM1035_10105" CDS complement(2078069..2080087) /locus_tag="RTM1035_10105" /note="COG0658 Predicted membrane metal-binding protein" /codon_start=1 /transl_table=11 /product="competence protein" /protein_id="jcventer:1101493006643_RTM1035_10105" /db_xref="CDD:31003" /translation="MGIWHRFEAIWLAQRGALFPWVPVGLACGVGTYFALLREPSVAA LWGCGGAALCSALLAARGREWSGPLLWTVALVLAGFALAGLRAHLVAGPVLGWRYYGP VEGRIVGIDRSASDALRLTLDRVVLERTDPARMPGRVRVSLHGDQSHFMPLAGQRVMM TAHLGPAGGPVEPGGFDFQRHAWFLGIGAVGYTRTPVLRLEAGQGGQPLFRARMALSQ HVQSRLPGQTGAFAAAIMTGDRAGLSLVTLEAMRVSNLAHLLAISGLHMGLLAGFVFA AFRLGFAAVPRLGLRLPAKKLSAFLALVAGAGYLGLSGGNVATERAFVMVAVMLGAVI LERRAFSLRAVAVAAIIVLVLQPEALLGPGFQMSFAATVGLVAVFGWLRDAGWSRGPR WLRPVLAVVISSAVAGAATAPVAAAHFNQYAQFGLLANLVSVPLMGVLVMPAAVLATL LLPLGLDWIALRVMELGLRWILTVADWVAALDGARVPVVAPGPYVLPLLALGALFIVL WQGRGRILGVLPVMVAVALWGAADRPVMIVSDTGGLIGIMTEAGRALNKPTGGGFVAD NWLENDGDDASREVAFARWSEDLALAHGVRVMAGKAATDMPDFCDGVMLVVMSVTPDP PPAQHRDCQIVTPETLRKTGSLALHLDKAGPRLVSARDTNGVRLWNSQ" gene 2080168..2081580 /locus_tag="RTM1035_10110" CDS 2080168..2081580 /locus_tag="RTM1035_10110" /note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /protein_id="jcventer:1101493006643_RTM1035_10110" /db_xref="CDD:28816" /translation="MSQQVVTRFAPSPTGYLHIGGARTALFNWLFARGRGGKFLLRIE DTDRARSTPEATQAILDGLAWLGLDHDDKAISQFERADRHAEVARKLLAEGMAYKCFA TQDEIETFREAARAEGRSTLYHSPWRDATPDQHPTDMPHVIRIKAPRDGVTVIRDEVQ GDVTIRNDQLDDMVLLRSDGTPVYMLAVAVDDHDMGVTHVIRGDDHLNNAARQMMIYQ AMGWPLPVYAHIPLIHGPDGKKLSKRHGALGVEEYQKMGYPAAGIRNYLARLGWSHGD AEFFDDAQAQAWFDLKGIGKSPARLDFKKLENLCGQHIAAADDAALLHELQGFLAATG QPALDDTKLTLFSRGMYCLKERAKTFPELLDKAAFILATRPIQPEEKAAEQLDTVSRG ILKELTPQLQTATWTREDIEGLATQFAEDHGMKFGKLAGPLRAALAGRSATPSVFDMM LVLGRDETIARLTDAACGGD" gene 2081657..2082952 /locus_tag="RTM1035_10115" CDS 2081657..2082952 /locus_tag="RTM1035_10115" /note="COG0372 Citrate synthase" /codon_start=1 /transl_table=11 /product="Citrate synthase I" /protein_id="jcventer:1101493006643_RTM1035_10115" /db_xref="CDD:40381" /translation="MSEVKRVAKLEIDGKTYELPLHSPTAGPDVIDIRKLYADAGVFT YDPGYTSTASCDSTITFIDGDKGELLHRGYPIDQLAEKSHYLEVCYLLLYGELPSPAQ LEDFESRVTNHTMIHEQMHFLFRGFRRDAHPMAIMVGVVGALSAFYHDSTDITDPWQR EVASIRLIAKMPTIAAMAFKYTIGQPFEYPRNELDYASNFLRMCFAVPAENYVVNPIL SRAMDRIFTLHADHEQNASTSTVRLASSSGANPFACVAAGIACLWGPAHGGANQACLE MLQEIGTPDRIPEFIARAKDKDDPFRLMGFGHRVYKNFDPRAKVMKQSADEVLELLGV ENNPTLQVAKELERQALADPYFADKKLFPNVDFYSGIILEAMGFPTSMFTPIFAVSRT IGWISQWKEMIADPQLKIGRPRQLYKGATMRDYVDIEKR" gene 2083185..2085455 /locus_tag="RTM1035_10120" CDS 2083185..2085455 /locus_tag="RTM1035_10120" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="calcium binding hemolysin protein, putative" /protein_id="jcventer:1101493006643_RTM1035_10120" /translation="MGGLLLLGLLAGVGLTAFVIDEVNEDDDDTNTNDINTDDTISGT PGDDILDGTARADEITARGGDDIVSAGGGDDFVQGGTGVDIILGGSGADTLSGDGGDD VLIGGRGDDLIEGGAGDDVLIGIDGGLNSQTGDELNRLIQSNPTIDALRPSIGTDQHG SDTLIGGDGEDALFLSGGDFGTGGAGEDRFQIGDWIEADTVATITDYVPASDFIDYSY VSNGTAPQVSVAPDDDGNALLSVDGVVIARVLGAATTLTPASVILSERADDSSTESGL NILRGTNGADLIDGSNVGDEITARGGNDLIASGGGRDEVFAGDGNDVVFGGNAADILW GGVGNDVVIGGAGGDSLQGNSGDDLILGLDIPLGSGSAAAISAFNLNSATPEALLEGL IRTPSEDLSGDDTLLGGSGNDVLVIGGDDTATGGLGADRFWLGEWVGGADTATITDYE PAVDQIVYYHSPVALGAATPVITLSTNAAGDAIILADGVPVAEVTGAGSTLTAAEIVI IERETPLNQITGSTGNDLITGRSIGDEITALEGNDVVGARGGDDQVFGGAGNDILDGG SGSDSVWGEAGDDVLIGGALRDVLFGSAGNDLIIGIDIQLGSGSAADIAAQGLDPATP RALLDDFARSSAEETSGDDNLSGGSENDVLIIGGDDTATGGVGEDQFWLGEWGRGADI ATITDFDRADDQIAYVYTAATPDAAPPVVTLTTNAAGDVTVLADGIAVARILGAGSTL TAADVALIARPPAVAA" gene complement(2085461..2086240) /locus_tag="RTM1035_10125" CDS complement(2085461..2086240) /locus_tag="RTM1035_10125" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="jcventer:1101493006643_RTM1035_10125" /db_xref="CDD:31227" /translation="MKDYQTITLEIADGVALLSLNRADKMNALNTQMRAEITDAVIHA GREARVVVLTGNGKAFCSGQDLSDGGNATTLDLERVLREEYVPMLRAITDCPVPTISA VNGPAAGAGANLALSADVVIATESAYFLQAFARIGLIPDAGGTYALPRQMGMAKAMGA ALFAEPITARQASDWGMIWEAVDDAGFDAHWRARAAKLAMGPTQTYGAIKQAIRSTWD NTLEGQLDLEAKLQGACGQTRDFKEGVVAFLEKRPPRFEGR" gene complement(2086313..2086765) /locus_tag="RTM1035_10130" CDS complement(2086313..2086765) /locus_tag="RTM1035_10130" /note="COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes" /codon_start=1 /transl_table=11 /product="Cytochrome c maturation protein, CcmH" /protein_id="jcventer:1101493006643_RTM1035_10130" /db_xref="CDD:43835" /translation="MKRLILALCVIAAPVFAVQPDEILDDPALEARARDISSGLRCLV CRNESIDDSNAELARDLRLLVRERLVAGDSNDEAVDFIVARYGEYVLLKPRSGGANML LWWAGPLMLGAGLLIGAAYLRGRARTPETEVARLSEAEENRLREILKE" gene complement(2086762..2088819) /locus_tag="RTM1035_10135" CDS complement(2086762..2088819) /locus_tag="RTM1035_10135" /note="COG1138 Cytochrome c biogenesis factor" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmF" /protein_id="jcventer:1101493006643_RTM1035_10135" /db_xref="CDD:31333" /translation="MAAAGLSPRQCGPVLTSIAIGQSVLLSYIRDMITELGHFALILA FLVACVQATIPLIGAYKRWPGWMALAEPAATLQFMLTAVSFAALTWAFVISDFSLRLV VLNSHTDKPMLYKITGVWGNHEGSMLLWVLIVTLFGAAVAWFGSNLPPSLRARVLSVQ AMVGVAFFLFILLTSNPFLRMAVPPFNGQDLNPLLQDPGLAFHPPFLYLGYVGLSMTF SFAVAALIEGRVDAAWGRWVRPYTLAAWIFLTIGIGLGSWWAYYELGWGGFWFWDPVE NASFMPWLIAAALLHSAIVVEKRESLKSWTILLAIIAFGFSMVGAFITRSGVLTSVHA FATDPERGVFLLAILAVFMAGALTLFAARAGVMQAKGVFSLVSRESALVLNNLLLAVA CFVVFIGTIWPLIAEMLFDRKLSVGEPFFNAAFTPFMVALGLVLPVGAMLPWKRATLG RVIRQLAPAFALALAIGALAWAMQTGRSALGPVGLFLAAWLIGGAAVDLWSRTGRGDG RLSRLTRLPRADWGKAVAHAGLGVTMAGIAAMMAWQQEDIRVLKIGDQFDIAGYTLRL DEVHDEEGPNYLSTMSTFTLSKDGVEIATMTPEKREYPVAQMPTTEAALDSGFLRDIY VVIGDPQIGGGWAVRSYYKPLANWIWGGSILMALGGFLSLSDRRYRVAAGARKVPQGV PAE" gene complement(2088801..2089367) /locus_tag="RTM1035_10140" CDS complement(2088801..2089367) /locus_tag="RTM1035_10140" /note="COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10140" /translation="MVMDILRALFGSGANVVRETAEVFRVNAEAADQRSIETQRAALE QMAGEFRLENRGLFDRIIDGLNRIPRPAMALGTIGLFVAAMVDPLWFGERMAGLALVP EPLWWLLGAIVSFYFGARYQAKGQDFQRSIASTVARAPHVAESIRTLRALNPSSPGVA DNGGDADLALTALTPADNPALAEWRRRG" gene complement(2089361..2089969) /locus_tag="RTM1035_10145" CDS complement(2089361..2089969) /locus_tag="RTM1035_10145" /note="COG3926 Putative secretion activating protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10145" /db_xref="CDD:45732" /translation="MQTVEQIAQEIVAREGGYVDDPDDPGGATNFGVTIHTMRRLGLD LTRDGVVDALDVRALTRDQAVSLFIDHYYQRPGIARLPQSLRPSVFDMYVNAGSNAVK ILQRLLREMGQEIEVDGVIGPQTAAAAEAAAKAAPDHIADAYGIARRNYYLRLADARP ESRKFARSRTGGKGGWIKRAEVFISPRFHLSQAQFNARISAW" gene complement(2090109..2090555) /locus_tag="RTM1035_10150" CDS complement(2090109..2090555) /locus_tag="RTM1035_10150" /note="COG2332 Cytochrome c-type biogenesis protein CcmE" /codon_start=1 /transl_table=11 /product="CcmE/CycJ protein" /protein_id="jcventer:1101493006643_RTM1035_10150" /db_xref="CDD:32483" /translation="MKSLKKKRRVQIIAIAAVALVMATALIGYGMRDGINFFRSPTQV LAEPPSPSEVFRIGGLVEEGSLKRGESETIRFNVTDGNGVVAVTYRGVLPDLFEENQG MVGTGSYRDGIFVATEILAKHDETYMPKEVVDALKAQGVYQEPDGS" gene complement(2090567..2091595) /gene="argC" /locus_tag="RTM1035_10155" CDS complement(2090567..2091595) /gene="argC" /locus_tag="RTM1035_10155" /EC_number="1.2.1.38" /note="COG0002 Acetylglutamate semialdehyde dehydrogenase" /codon_start=1 /transl_table=11 /product="N-acetyl-gamma-glutamyl-phosphate reductase" /protein_id="jcventer:1101493006643_RTM1035_10155" /db_xref="CDD:30351" /translation="MTHNIAILGASGYTGAELVRLIATHPNMRITALAANSKAGQSMG QVFPHLRHLDLPDLVTIEEIDFSGIDLCFCALPHKTSQEVIANLPRDLKIVDLSADFR LRDPAAYEKWYGNPHAAPEVQQEAVYGLTEFYREDIRSARLVAGTGCNAATGQYILRP LIAAGVIDLDEIILDLKCGVSGAGRSLKENLLHAELSEGYHAYSVGGTHRHLGEFDQE FSALAGRPVEIQFTPHLIPANRGILATGYVRGEAAQIHATLAAAYANEPFVVVLPMGE TPSTRHIRGSNFCHIGVVADRRAGRAIVIAALDNLTKGSSGQALQNANLMLSEPETTG LMLAPVFP" gene complement(2091691..2092503) /locus_tag="RTM1035_10160" CDS complement(2091691..2092503) /locus_tag="RTM1035_10160" /note="COG0796 Glutamate racemase" /codon_start=1 /transl_table=11 /product="Glutamate racemase" /protein_id="jcventer:1101493006643_RTM1035_10160" /db_xref="CDD:31139" /translation="MAVGIFDSGLGGLTVWDAVSKRLPEVPLVYLGDNAHAPYGVRDA DDIYDLTTSSVERLFAAGCDLVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEA LTERQWGDNSPPREVAVKNVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGVVDA IEDGDMILAEALVRSHVDALKRKMPHPEAAVLGCTHYPLVQEVFQDALGPDVAVYSQP NLVASSLADYLGRHPDKIGAGAEAAFLTTGDPKRVSSRATQFLRREIKFSAA" gene complement(2092522..2093385) /locus_tag="RTM1035_10165" CDS complement(2092522..2093385) /locus_tag="RTM1035_10165" /note="COG3176 Putative hemolysin" /codon_start=1 /transl_table=11 /product="acyltransferase domain protein" /protein_id="jcventer:1101493006643_RTM1035_10165" /db_xref="CDD:32989" /translation="MRQDRQIARDISYSYSAQTKSGRALIRTMENLTGRIELIKRAAG YETEVLQGRDFWEVIVERYGLTLDVVGGSLSNIPKEGPLVLIANHPYGILDGLMMGHI LSQTRGDFRILAHQIFRKAEDLNKVILPISFDETKEAVALNLATRKTALDYLGQGGAI GIFPGGTVSTAAKPFSRPMDPGWRGFTAKMIAKSQAAVVPVYFDGHTSRLFQLASHLH VTLRMGLLIKEFRKRVDTPVRVVVGDPIPRSTLAQYAGDTKSLMAFLRAKTYELSPSP IVASEIGFEFE" gene complement(2093463..2096882) /locus_tag="RTM1035_10170" CDS complement(2093463..2096882) /locus_tag="RTM1035_10170" /EC_number="1.2.7.8" /note="COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits" /codon_start=1 /transl_table=11 /product="indolepyruvate ferredoxin oxidoreductase" /protein_id="jcventer:1101493006643_RTM1035_10170" /db_xref="CDD:33956" /translation="MTTQKVTLNDRFDLEKSPVLLNGTQALVRLMLMQAARDRAAGLN TAGYVTGYRGSPLGAVDQQMLRAEKVLRAAEVRFEEGLNEDLAATALWGSQQAELRGE GKYDGVFGLWYGKGPGVDRSGDVMRHANMAGTSKHGGVLMAMGDDHTGESSTVLHQSE WALVDAYMPVVSPAGVQEILDYGIYGYALSRFAGVWVGLKTMKDTVEATSVVDGRPDR VQLVTPDLPMPEGGLNIRLIDTPHAQETRMIDFKRFAAEAFSRANGMDKRMLGKAGAK IGFVAAGKNWLDLVHALDLLGVDAEEAERLGITTYKVGQVFPLDMQGFHDWAEGLDLI VVVEEKRKLIEVQIKEAIFDDRRGRRVYGWYKGGAGGMHREELFPTRGALDPIWIAEK LGGILIEEGRGTDRIKAGLEALSEARRNDNAAEIATRLPYFCSGCPHNTSTRLPEGAR AYAGIGCHYMVQWMDRETTGFTHMGGEGANWIGEAPFSTRKHVFQNLGDGTYNHSGVQ AIRAALAAGTTITYKILYNDAVAMTGGQPNEGGLNAPRIAAELRAMGVQHLAVVYDEK EDVDLKSFPQGIEFSERSDLMAVQERLADIEGVSVILYIQTCAAEKRRRRKRGKFPDP DRRVFINTDVCEGCGDCGVQSNCVSIVPVETELGRKRAIDQSSCNKDFSCLKGFCPSF VTVEGAKIRKDSTAEVTLPEMPAPALPAIDGTYNVVITGVGGTGVVTIGAVMAQAAQI DGKGAGMMEMAGLAQKGGAVHIHCRLAENPGDISAIRVATGECDALIGGDLVVSAGAK TLGLTRAGRTGAVVNSHEIITGDFTRNTEFTLPADRLRLALEARLRDAVQMFDASDLA KAVMGDSIYSNMMIFGAAWQRGLIPLSHDAITEAIRLNGAAVDANLRAFEVGRWAALY PAEVEKLLTPKVVAKPKTLAERIDYRVAHLTAYQSKRLARRYLRLLDGITDEGVKDAV AQGYHKLLAYKDEYEVARLHLETAQKARAEFGGDFTLKFHLAPPMLSKMGSDGRPKKR EFGSGILRAFGVLARLKGLRGTPLDPFGRTAERRMERALIVQYELDMAEVLPKLTAQT RDAIIALALLPLSIRGFGPVKEGNAAKAATRRTELLAVIRSGGTEMAQAAE" gene 2097051..2097956 /locus_tag="RTM1035_10175" CDS 2097051..2097956 /locus_tag="RTM1035_10175" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family protein" /protein_id="jcventer:1101493006643_RTM1035_10175" /db_xref="CDD:30928" /translation="MDWDKLRIFHAVADAGSLTHAGEQLHLSQSAVSRQVRALEESLN ATLFHRHARGLILTEQGELLFDATRAMMKRLDAATARIRDSEEEVFGDLRVTTTTGFG TLWLAPRLPKLYEKYPDLKIDLMLEERVLDLPMREADVAIRMKEPSQADLIRKRLMSV HMCLYATQSYLDAHGEPSSLEDMSAHRLICQNPRSAQVGAGAMLVNELMTNDISSLLT VNNYFGVLQGVLNDLGIGVLPDYLIRDFPQLVRVLPEVQSVEVPVFLAYPEELRHSKR IAAFRDFVQDEIISYRKTVKEQAVS" gene complement(2098190..2099320) /locus_tag="RTM1035_10180" CDS complement(2098190..2099320) /locus_tag="RTM1035_10180" /note="COG0006 Xaa-Pro aminopeptidase" /codon_start=1 /transl_table=11 /product="peptidase M24" /protein_id="jcventer:1101493006643_RTM1035_10180" /db_xref="CDD:30356" /translation="MRRGFAPAEFKARLRAAQAGMAEIGLGALLLTTEPEIRYFTGYL TRFWESPSRPWFLILPASGDPVAVIPTIGAALMGRTWVRDIRTWAAPDPEDDGVSLLA ETLREIGGPVGVPSGPESHLRMPLAEFERVKRASGLVFRDEAGIVAGLRAIKSEAEIV KIAHICDIAGRAFDRVGEIAEPGVPLSAVFRDFQRLLLEKGADWVPYIAGGAGPMGYA DVISPAGETHLAAGDVLMLDTGAVWDGYFCDYDRNFAIGHATAEQSAAHARLIEATEA GEEAARAGATAFDVWQAMARITGADERSGRLGHGLGMQLTEGLSLTAKDHTVLRPGMV ITLEPGVEVAPGMIMVHEENIVIREGRAQRLSRFAPPNLPVI" gene complement(2099317..2100348) /locus_tag="RTM1035_10185" CDS complement(2099317..2100348) /locus_tag="RTM1035_10185" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="Pyridoxal-5'-phosphate-dependent enzyme, beta subunit" /protein_id="jcventer:1101493006643_RTM1035_10185" /db_xref="CDD:31364" /translation="MQEIDNPWRGEGLPETVLTGAPWPSVDVGAVQALLGRCPAAAET PLVPVTGFAPKVWAKDERGRMGLGSFKALGAAYVIAHEAAETGAEDMSHALAGRTYVT ASAGNHGMSVAAGARLFGARAVIYLAETVPEGFAARLRAKGAEVVREGQEYEASMVAA GRAAMDNDWTLLSDSSWPGYLDLPHRLMEGYLAMAEEAARQMPEVPTHILLQAGVGGL AGACAAWFRQVWGDAPRIIVVEPDRAPALYESIRAGRALETSGPVSNMGRLDCKVPSL IALKGLARDADAFVTITDDEAEAVLEGLAAQGLATTPSGAAGVAAIAGLALGAGARVL CILSEGPEA" gene complement(2100424..2101212) /locus_tag="RTM1035_10190" CDS complement(2100424..2101212) /locus_tag="RTM1035_10190" /note="COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs" /codon_start=1 /transl_table=11 /product="molybdopterin dehydrogenase, FAD-binding protein" /protein_id="jcventer:1101493006643_RTM1035_10190" /db_xref="CDD:34249" /translation="MYAFDIERPATIADAIAALGTEEAQALGGGQTLIPTLKQRLAAP AKLVCLSAIKEMQGICTADDGALCIGGGTTHAEVAAGAGAYPALAGLAGHIGDPAVRN RGTIGGSLANNDPSACYPAAVLGSGATVITSNRSIAADDYFQGMFTTALEDGEIITEV RFPVPEKASYQKFEQPASRFALVGVFVAKYAGGVRVAVTGASEEGVFRWAEAEAALSG NFAPEALEGLTLSGDGMISDLHGSGAYRAHLVGVMTRRAVAAAH" gene complement(2101224..2103587) /locus_tag="RTM1035_10195" CDS complement(2101224..2103587) /locus_tag="RTM1035_10195" /note="COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /codon_start=1 /transl_table=11 /product="Carbon-monoxide dehydrogenase" /protein_id="jcventer:1101493006643_RTM1035_10195" /db_xref="CDD:31718" /translation="MPKDGGIGASTKRREDIRFLTGNGNYTDDINLRGQAYVHFLRSD VAHGRLNKVDTRTAESMPGVLRIFTGADFEGVGGLPCGWQVTDRFGEVMQEPGHPVLA RGKVRHVGDPIAAVVAETYAQARDAAEAIELDIEELPAVVDMKKALEAGAPLVHDELK NNLCYDWGFVEENKGAVDEAFAKAAHVTTLELINNRLVANPMEPRVAVGDFNRSTGDS TLYTTSQNPHVIRLLMGAFVLGIPEHKLRVVAPDVGGGFGSKIFHYAEEAFCTFAAKA LNRPVKWTSSRSEAFMTDAHGRDHVTKIELALDAENNFTAVRTDTYANMGAYLSTFAP SVPTWLHGTLMAGNYRTPLIYVNVKAVFTNTVPVDAYRGAGRPEATYQLERVIDKAAR ELGVDPIALRRQNFITQFPYATPVAVEYDTGDYHATMDKLEEIADFGGFEARREASAA KGKLRGLGINCYIEACGIAPSNLVGQLGARAGLYESATVRVNATGGLVVMTGSHSHGQ GHETSFAQVVAEMIGIDANMVEIVHGDTANTPMGMGTYGSRSIAVGGSAMVRATEKII NKAKKIAAHLMEASEADIELKDGKFSVAGTDKSVAWGDVTLAAYVPHNYPLADIEPGL EETAFYDPSNFTYPSGAYACEVEVDPDTGKVTIERFAAADDFGNIINPMIVSGQVHGG IGQGIGQALLESCVYDENGQLQTGSYMDYAMPRADDVPFYQVDHSCQTPCTHNPLGVK GCGEAGAIGSPPAVVNAVIDALQRSGRNITHIDMPLSPSRVWQAMQG" gene complement(2103706..2104191) /locus_tag="RTM1035_10200" CDS complement(2103706..2104191) /locus_tag="RTM1035_10200" /note="COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /codon_start=1 /transl_table=11 /product="(2Fe-2S)-binding protein" /protein_id="jcventer:1101493006643_RTM1035_10200" /db_xref="CDD:32263" /translation="MPEVKMTVNGKPASGQIEGRTLLVEFLRETLGLTGTHVGCDTSQ CGACVVHVDGKAVKSCTMFAAEAEGAEIKTIEGMAEPDGTLHPIQQAFQDHHGLQCGF CTPGMVMSAAALLAENPTPSESEVRDYLEGNLCRCTGYHNIVKAILAASGQDVSRIAA E" gene complement(2104308..2105300) /locus_tag="RTM1035_10205" CDS complement(2104308..2105300) /locus_tag="RTM1035_10205" /note="COG0303 Molybdopterin biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein" /protein_id="jcventer:1101493006643_RTM1035_10205" /db_xref="CDD:30651" /translation="MKFGPVPLDRAEGAILAHSEQVGTGRLRKGAVLDADQIAALRAA GYRAVTVAMLDPEDMHENDAAAALAAALAEGAEAMTCSAPFTGRVNLIAARPGVVCLD VAAIHAANAVDPMITVATVVPHHQIHEGGMIATVKIIAYGVPRAALERAAEAARGAVR LAVAQYRTASLIITDVPGGPGDKGRDAIAARVTGLGMEMVDTLICPHDEAALAAAITR AKGEIVLILTASATSDPFDTAPQALRAAGGEVERFGMPVDPGNLLFLGRLGARPVIGL PGSARSPVLHGADWVLARVACDLPCGAAEIAAMGVGGLLKEIPTRPQPRRGGRG" gene complement(2105297..2106268) /locus_tag="RTM1035_10210" CDS complement(2105297..2106268) /locus_tag="RTM1035_10210" /note="COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family" /codon_start=1 /transl_table=11 /product="XdhC/CoxI family protein" /protein_id="jcventer:1101493006643_RTM1035_10210" /db_xref="CDD:32158" /translation="MSKMDRFDDIPETALAWHRAGKGAALATVVETWGSAPRRVGSQL AISGAGEIAGSVSGGCVEGAVVLEAVEAIETGKPVLLDYGVSDGDAFAVGLACGGTIR VLVEPIGSVMPEALLSDLVLARDARVPVAYVTGPDGRRLEREGHDARFRMDRSGFEED GATFVAIHNPPLRLIIVGAVHIAQALVPMARIAGYDPLLIDPRESFGSETRFPGETVV QDWPDEGVRAFGLDARSALVLLTHDPKLDDPALIEALRSEVFYIGALGSTRTHAKRVA RLQEAGFSEAEIARIHGPIGLDIGAAGPSEIAVSILAEMTRVLRKGA" gene complement(2106265..2107527) /locus_tag="RTM1035_10215" CDS complement(2106265..2107527) /locus_tag="RTM1035_10215" /note="COG3552 Protein containing von Willebrand factor type A (vWA) domain" /codon_start=1 /transl_table=11 /product="VWA domain containing CoxE-like family protein" /protein_id="jcventer:1101493006643_RTM1035_10215" /db_xref="CDD:33354" /translation="MTDYAPLDLPDDPKLTHNITHFARALRAAGVPVGPGRVIDAIRA VAVAGFSSRIDFFYTLRACLVTRPEHLLVFAQIFRLYWRDPRYVEHMMAMMLPAIRGV QEDRSAQAAEKRAAEALLDGVMRDAPQIDERDDDEVKIEIDATATMSGEERLRRLDFE QMSTAEMAQAKRMLARLTLPVKPFASRRGMAAQSGARLDARRTLRAGLRHGGELRRLH WQKPRERWPNLVVLCDISGSMSQYSRMVLHFLHAVANTKGAGWARVHAFTFGTRLTNI TRQLATRDVDAALAAAGKQAQDWEGGTRIGACLHAFNRDWSRRVMGQGAVVLLITDGL DRDAPEALSHEMERLHLSARRLIWLNPLLRWEGFAPKAQGIKAMLPHVDAFRAGHSIA TLEELAEAISRRDDSGEKARLMAAMQGR" gene complement(2107586..2108494) /locus_tag="RTM1035_10220" CDS complement(2107586..2108494) /locus_tag="RTM1035_10220" /note="COG0714 MoxR-like ATPases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10220" /db_xref="CDD:31058" /translation="MQKPTSIDAVQSLFAGQDYVCGRALGTVTYLALTLGRPLFLEGE AGTGKTEIAKALARALGRRLIRLQCYEGLDAASAVYEWNFTGQMIAIRAAEASGGVDR SHLKDELFTQEFLIERPLLQAMRPQPGGAPVLLIDEIDRTDEPFEAFLLEALSDFQVT IPELGTIHAPEPPIVILTSNRTREVHDALKRRCLYHWVDYPTFDREIEILQARAPEAA EVLSREIVAFVQRLRTEDLFKKPGVAETIDWAKCLLALDVISLSPEVIADTLGAILKY QDDIAKLQGSEAKRLLDEVRAGLEPT" gene 2108697..2109647 /locus_tag="RTM1035_10225" CDS 2108697..2109647 /locus_tag="RTM1035_10225" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10225" /translation="MQDNADIFDADLSGLDWAAWCERANELAGEDGYAERLGDKHAAV LIERKPTLLVSFEAFHRLPTLSPQAQPLGWALTKALGWSHLCLISERDTWFRDKRVYG YFDRLIDDGFFDDFEQVIFYGAGPCGYAAAAFSVAAPGAKVVMLSPQATLDPRVAEWD DRFLRMRRVSFCDRYGYAPDMLDAAASAVLIYDPEVELDAMHAALFTRSNVMKFRTRY LGYQIEPALLRMGVLFRLLAQVSANRLTRLSLAQLYRKRREDTPYLANVLQRLMADER DALTVLHCRNAIGRGVGGPRFRRALKHVQTKGQQTDQSDD" gene 2109690..2110739 /locus_tag="RTM1035_10230" CDS 2109690..2110739 /locus_tag="RTM1035_10230" /EC_number="3.5.2.3" /note="COG0418 Dihydroorotase" /codon_start=1 /transl_table=11 /product="dihydroorotase" /protein_id="jcventer:1101493006643_RTM1035_10230" /db_xref="CDD:30767" /translation="MRKRMSQILTLRRPDDWHLHLRDGAMLRAVLPETTRHFARAIVM PNLVPPVVTGQDASAYRARIMAAMPEGADFTPLMTLYLTENTDPEDVAAAHASGLVTA VKLYPAGATTNSASGVRDFDKVRAVLEKMAEIGLPLCVHGEVTDPSVDIFDREAVFID RVLDPVRRATPGLRVVMEHITTANGVDYVRAHDRDLGATITTHHLVINRNHILVGGIK PHYYCLPVAKREEHRLALRAAATSGDARFFLGTDSAPHIDPLKESACGCAGCFTATNT MSILAHVFEEEGALAQLEAFTSLNGPAFYGLPANETTLTLTKGDPVTYPQKIDTADGP VTVFDPGFPLDWHAT" gene 2110846..2111322 /locus_tag="RTM1035_10235" CDS 2110846..2111322 /locus_tag="RTM1035_10235" /note="COG1943 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10235" /db_xref="CDD:32126" /translation="MSNYIRPQIAGACVFFTVTLANRHSQLLTREIAALRAAVRRTKA ERPFAIDAWVVLPDHMHCVWTLPDGDRDFSTRWSVIKARFSRAMPPTPRRPSHAGRRE HGIWQRRFWEHHLRSEADKTAAIRYCWINPVKHGLADRPEAWPYSSIHRDGPADWP" gene complement(2111319..>2111412) /locus_tag="RTM1035_10240" CDS complement(2111319..>2111412) /locus_tag="RTM1035_10240" /codon_start=2 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006643_RTM1035_10240" /translation="TLRERVVPLVMVRNECASYGVGASGDDGAS" gene complement(2111585..2112517) /gene="thyX" /locus_tag="RTM1035_10245" CDS complement(2111585..2112517) /gene="thyX" /locus_tag="RTM1035_10245" /EC_number="2.1.1.148" /note="COG1351 Predicted alternative thymidylate synthase" /codon_start=1 /transl_table=11 /product="FAD-dependent thymidylate synthase" /protein_id="jcventer:1101493006651_RTM1035_10245" /db_xref="CDD:42487" /translation="MMKGLAMPLSPDQKAEIDAQRAQSHSTLRATAAGMEQHLYTAYP VLDHGFVRVIDYMGDDAAIVQAARVSYGAGTKHVQNDEGLIRYLMRHWHSTPFEMCEL KLHVKLPVFVARQWIRHRTANVNEYSARYSILDREFYIPTPDMLAAQSTTNNQGRGAA LEGEEAQRVLRILTEDAMRCYDHYEGMISQEGQQGLARELARMNLPANIYTQWYWKVD LHNLLHFLRLRADAHAQYEIRVYAEEICRLVADWVPYAYKAFEDYRMGGANLSAPALE CVRRMLKGEVVTQETSGMSKGEWREFEGVLNGPA" gene 2112707..2113636 /locus_tag="RTM1035_10250" CDS 2112707..2113636 /locus_tag="RTM1035_10250" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10250" /translation="MKHIVAGLMAAALLGGCGGGGSSNPFDGRGEDDDTTTPPPAGSS VPAEIAQDVTGVAFDPVTQTLTVEGLSFDGTTDPVTYNRAAALDVPGYQAYTIQQDGA SRHSTAFAAQSQTSGAVTAGVAATGGPRNRFFTGAFFERTGSYTQPTSGEVVYTGRYV GITNLDSQGGDLLPPPAGLAPELIPTQAASTQGDVVLRANFGDRQIEGNIINRRLSET PGGVVIDLPSLVLINAEITEGGTFSGTVEYDQSAFPADRVTGTSIGSSAGVFGGTGAT EVAGGIKLNEFDGPGNPLGLNNELETGIFVLDR" gene 2113647..2115068 /locus_tag="RTM1035_10255" CDS 2113647..2115068 /locus_tag="RTM1035_10255" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10255" /translation="MTATLNTKAQTGFALRPRHIRHLLRAGVFLSALGLAGIGAATPA NLTLAQADALAAQALGAGQPRLAYDLSKGLLQADRRNPRAHYYQALALSQAKAYGAAE KKAALAYWHAKTDEQRFQAANLAAQLSFADDRFTGSQFWLRRAVDHAPDEVARAQTVT AFQNVRARNPLRFDFRFSTTPSDNVNNGANSPLNVIDGVPVVGTLSPSAQALSGFVTT AQAALSYRLSKSETHETRLRGRVNARRVDISDPVPGLSGDDLSSTVLELGLSQYLRGT SEAVTWKFDLDGGRVWYGGDPLYDFARVGATRHQRLGARLQLSFGASFEDQLYESPRG ADSTVATGFAGLGVNLTGGGQIGFQVQYRDTDSNGVNRASDQWTGIASYQMGRALGPA NLEFSLGISQLDYSSYQVGFIVVPGGRDDTSVFGGVTATFNDWGYMGFVPTLSVTTER SESNISRFDVEETSITLGIRSEF" gene complement(2115065..2115157) /locus_tag="RTM1035_10260" CDS complement(2115065..2115157) /locus_tag="RTM1035_10260" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10260" /translation="MRMVILRDCNGLEDSGPRAGVEGNLGWAGR" gene 2115150..2115578 /locus_tag="RTM1035_10265" CDS 2115150..2115578 /locus_tag="RTM1035_10265" /note="COG0346 Lactoylglutathione lyase and related lyases" /codon_start=1 /transl_table=11 /product="Glyoxalase/bleomycin resistance protein/dioxygenase" /protein_id="jcventer:1101493006651_RTM1035_10265" /db_xref="CDD:40980" /translation="MRIKYLHTMVRVKDLEATQQFFALLGLKETRRWDNEGGRFTLVF MAPEGQEDCPVELTYNWDGDEGLPSDSRHFGHLAYATSNIYDLCQHLMDNGVTINRPP RDGRMAFVRSPDNISVELLQEGDALPPAEPWASMENIGHW" gene 2115545..2116276 /locus_tag="RTM1035_10270" CDS 2115545..2116276 /locus_tag="RTM1035_10270" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10270" /db_xref="CDD:46593" /translation="MGQHGEYRPLVRLAACLLAASLAAPAQGACRLALVLALDVSSSV DDAEYGLQRVGLASALNAPDIREAILRGGSGDVALAVYEWSGRFQDKLHLDWTFLRND ADITGAVAVLAGMQRSTSDYPTGLGSALGYGAALMARGPRCDRQVIDVSGDGVNNQGF GPDLAYKHFPFDNITVNGLVIEGHDQQVTQYYRREVLRGPGAFLEIAQGFEDFERAMS RKLYREINDLMLGALPHPTPRPLPQ" gene complement(2116270..2116782) /locus_tag="RTM1035_10275" CDS complement(2116270..2116782) /locus_tag="RTM1035_10275" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family protein" /protein_id="jcventer:1101493006651_RTM1035_10275" /db_xref="CDD:47674" /translation="METNMSYHSPLTTSAIQSAFISSYLDALSLVERLHRLLLDVIKD EFERVGVLEINAVQALLLFNIGDHEVTAGELKTRGYYQGSNVSYNLKKLVDMGYMHHQ RCEADRRSVRVRLTEKGRTIRDLVGDLFARHAEGLEGRGVLGPDGIDQITASLRRVER YWTDQIRYIY" gene complement(2116861..2117157) /locus_tag="RTM1035_10280" CDS complement(2116861..2117157) /locus_tag="RTM1035_10280" /note="COG2938 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10280" /db_xref="CDD:32761" /translation="MSDTPVEAPGAADEPPAHRIKRLRMRAMRRGIKEMDIILSRYAE ARLGAMDAAALDGFDALLCENDQDLYQWVTGQAAPPAQFAPLVAEIAAEASGGK" gene complement(2117150..2117551) /locus_tag="RTM1035_10285" CDS complement(2117150..2117551) /locus_tag="RTM1035_10285" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family protein" /protein_id="jcventer:1101493006651_RTM1035_10285" /db_xref="CDD:28977" /translation="MTADNTDGWFDPDATTFGDRVTGARERSGMSQSDLAKRLGVKLK TLKAWENDLSEPRANKLSMMAGMLNVSLLWLLSGEGEGPGAPEMGELSRDVMDMLTEI RDIRAQMTRATDRLGRLEKTLRAKLREEAGE" gene 2117637..2118839 /locus_tag="RTM1035_10290" CDS 2117637..2118839 /locus_tag="RTM1035_10290" /EC_number="2.6.1.1" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase" /protein_id="jcventer:1101493006651_RTM1035_10290" /db_xref="CDD:30785" /translation="MSRLSATLSRVKPSPTIAVTTKAQELKAAGRDVIGLGAGEPDFA TPAHIRAAGIRAIEEGKTKYTAVDGIPELKAAICAKFKRDNGLDYVPAQVSVASGGKQ ILYNALMATLNPGDEVLIPAPYWVSYPDMVLLAGGEPVIAPAGIETGFKLTPEALEAA ITPKTRWFIFNSPSNPTGAGYTWDELKGLTDVLMRHPHVWIMTDDMYEHLAYDGFEFC TPAQVEPALYDRTLTCNGVSKAYCMTGWRIGYAAGPQDLIGAMRKIQSQSTSNPCTIS QWAAVEALNGSHDFIAENNAVFARRRDLVVAMLNEIEGLECPTPNGAFYVYPSIAGLI GKTSAGGAKIADDEAFATALLEETGVAVVFGAAFGLSPNFRISYATSDEALHEACTRI QTFCKGLS" gene 2118848..2119252 /locus_tag="RTM1035_10295" CDS 2118848..2119252 /locus_tag="RTM1035_10295" /note="COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10295" /translation="MAGDLPEYYFRVRENGAFVFRVDTENRQRRIEMEQIATVNIRKS EIKPHGERALTDADSAAITAWMEERLKLVEYRDIDDILRAVDYLNTTTHWVQSKATDD QLEQVTDSLLLAMHDLRSVLVRKKADRLLKGE" gene complement(2119343..2120308) /locus_tag="RTM1035_10300" CDS complement(2119343..2120308) /locus_tag="RTM1035_10300" /note="COG0535 Predicted Fe-S oxidoreductases" /codon_start=1 /transl_table=11 /product="radical SAM domain protein" /protein_id="jcventer:1101493006651_RTM1035_10300" /db_xref="CDD:43972" /translation="MDDFMKDTVTGPANQGKFQDPARTAKGDVRASVALSHPETLWFN TGTLCNIECRNCYILSSPSNDALVYISESEVRDYLGQVRARGWPLREIAFTGGEPFMN PEMIGMARAALEAGFEVLILTNAMRPMMRKTMRAGLLDLGKTWGEKLTLRISVDHWSE ALHDEERGAGAFAKTLEGMCWLRDNGIRMTVAGRTVWGESEAQSRAGYAAFYAEHGFE IDAYDPGATVLFPEMDEGAEVPEITTACWDILGKRPEDIMCASSRMVVKRRGAARPAV VACTLLPYAPEFELGETLAEAERDVALNHPHCAKFCVLGGASCSR" gene 2120456..2121910 /locus_tag="RTM1035_10305" CDS 2120456..2121910 /locus_tag="RTM1035_10305" /EC_number="1.1.1.49" /note="COG0364 Glucose-6-phosphate 1-dehydrogenase" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /protein_id="jcventer:1101493006651_RTM1035_10305" /db_xref="CDD:42737" /translation="MASRVIPVDPFDLVIFGGTGDLARRKILPALFRRFVAGQIEGDV RLIGAARGDMDRDGYRAMARAAITEFGGEESARKKDLTAFLDLLDFVTLDARGTEGWE PLAALMRPDRIRAFYFSVAPALFGDLAKRLHKHGMADERSRIVVEKPFGRDLETARDL NRTLARHFSEGQIYRIDHYLGKETVQNLMAIRFGNVLFEPLWNSQYVDHIQITVAESV GVGGRGDYYDKSGAMRDMVQNHMMQLLCLIAMEPPAKFEPDAVRDEKLKVIRALDPVA RRNVVRGQYEGDGTQPGYRNQVGNRDSTTESFVALKAHISNWRWAGTPFYLRTGKRLR DRASEIAVVFKDAPHSIFGADAGRHRNILTIRLQPNEGIELGVTIKEPGPGGMRLIDV PLDMTFAEALGPEEADFPDAYERLIMDVIRGNQTLFMRGDEVEAAWAWTDPIIADWEE EGATPLDYATGSSGPDDALMLMHRDGRRWREIRP" gene 2121907..2122578 /locus_tag="RTM1035_10310" CDS 2121907..2122578 /locus_tag="RTM1035_10310" /note="COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase" /codon_start=1 /transl_table=11 /product="6-phosphogluconolactonase" /protein_id="jcventer:1101493006651_RTM1035_10310" /db_xref="CDD:30712" /translation="MTFVDYADDEMLVMGLVDVLSTDLRNALRTRDRVLFVVPGGTTP GPIFDGLCGLDLDWDRVDILLSDERWRPEVHLRSNTRLLRERLLRDRAAAARYLPLYA KSPEPEEVLAELETNIAPALPIDVCLLGMGTDMHTASLFPGADRLADALAEDAPILVP MRAPGLEEPRVTLSAHVLNGALCKHVVITGTQKRAAFERAQHMRPLEAPIAAVLAGAR VHWCP" gene 2122591..2124171 /gene="pgi" /locus_tag="RTM1035_10315" CDS 2122591..2124171 /gene="pgi" /locus_tag="RTM1035_10315" /EC_number="5.3.1.9" /note="COG0166 Glucose-6-phosphate isomerase" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate isomerase" /protein_id="jcventer:1101493006651_RTM1035_10315" /db_xref="CDD:40437" /translation="MWSEVEEVAKAARDIDITGLFSDPTRAETFSTRFDGMLFDYSKT ALTVPARAALLTLAQTAGVAARRAAMFAGEAINETEARPVLHTALRNLSGQPVMVEGS DIMAEITETRARMARFADTVRQGPITDVVNIGIGGSHLGPEMAVRALRPYHDGPRCHF VSNVDGADIADTLAGLNPATTLVIVASKTFTTIETMTNAATAQAWMTRAGVNPGPQFA AVSSAAARAADWGIDASAVFGFGDYVGGRYSVWGPIGLPLMIAIGPDRFKDFLRGAEA MDQHFQTATPLENMPLMLGLIGLWHHQGLGHGTRAVLPYDQRLARLPAYLQQLEMESN GKRVSMSGAALSRPSGPVVWGEPGTNGQHAFYQLIHQGTAVVPCEFLVAATGHEPELA HHHRLLVANCLAQSKALLRGRSLDEARALMRDAGYTGPELERQAAHRVFPGNRPSTTL IYDRLTPRRLGQIIALYEHRVFVEGVILGINSFDQWGVELGKVLAVDVDAMLTGDTNP TRDGSTAALVAFARAAGV" gene 2124288..2125274 /locus_tag="RTM1035_10320" CDS 2124288..2125274 /locus_tag="RTM1035_10320" /note="COG2326 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="polyphosphate kinase 2" /protein_id="jcventer:1101493006651_RTM1035_10320" /db_xref="CDD:43893" /translation="MTESPLSSLPTPEPAAIPTTLPELAVEQPTPAPAAANLLVTPAE NDPNSLRDAFESGAYPYETRMGRRSYETQKAHLQAELLKVQLWAQETGQKFVLIFEGR DAAGKGGTIKRFTEHLNPRAARVVALNKPTDQERGQWYFQRYVQHLPTSGEMVLYDRS WYNRAGVERVMGFCQPHEYLEFMRETPELERMLVRSGIRLYKYWFSVTQGEQRARFAS RETDPLKQWKLSPIDKASLDKWDDYTEAKEAMFFYTDTADAPWTVIKSNDKKRARLNC MRHFLSSLDYPGKDPKIAQAPDPLIVSNAQHVLHKSDHILGKSLHPEDRKSR" gene 2125375..2126133 /locus_tag="RTM1035_10325" CDS 2125375..2126133 /locus_tag="RTM1035_10325" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10325" /db_xref="CDD:45607" /translation="MIIKALDSLGGLLFGREKYRRGHYKLAKRLAARQRFEVYKPHLI WLTDPEFIAARDMAEARGIEGSPHDRCFTLMTSARMVRAIEGNFAECGVRYGKSSLFL LTGAGAQSTKRLHIFDSFQGLSEPSDADVQSGGKSEWSKGDLAVPEDIVRQNLSAFGD RLELHKGWIPDRFNDVADQEFSLVHVDVDLYEPTLASVEFFYPRVKPGGVILCDDYGS GDCPGAKKAIDEFFADKPENVLSLTSGQSFVIKA" gene 2126211..2126855 /locus_tag="RTM1035_10330" CDS 2126211..2126855 /locus_tag="RTM1035_10330" /note="COG3683 ABC-type uncharacterized transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10330" /db_xref="CDD:46117" /translation="MKPLIPMALAATLCLPAARLGAHPHVFVDVALRFTADTQGRLSE VEVTWSYDDFFSLLILTDMGLDPDGDGTLTEAELAQLKGFDLIEWPDGFEGDLYMYQG ETKIALDHPIPTGIALTNGRIIATHTRTFGPVNADALRIEAYDPTYYVAHSLAGPITL PKGCVYTITEPDLDESQEQFRQMLSELSAEEQYSGVEIGNLFSESLSVTCAAPS" gene 2126837..2127769 /locus_tag="RTM1035_10335" CDS 2126837..2127769 /locus_tag="RTM1035_10335" /note="COG2215 ABC-type uncharacterized transport system, permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10335" /db_xref="CDD:32397" /translation="MRRPVLSLAALALAALVIWLWGFGGAAQVSTWARAGQAETQQAM ARLLRALRAGEPGALAGLLGLCFAYGFFHAAGPGHGKILIGGYGMAARVSAFRLSLLA LASSFAQAAAAVLLVYSGVFLFDLTRQHMTDLAEDIMAPASFAAIALVGLWLAFRGLR RWRASRPARHHDHHHHADHNHHNHHDHDAPCSSCGHKHGPTLAEAEAVTGWRDAAALI GAVAIRPCTGALFLLILTWRMDLDLAGILGAFAMGLGTASVTLAVALASVTLREGALA RLAAGDTARALPLFEIAAGVIIAALSTHLMLGTL" gene 2127812..2129194 /locus_tag="RTM1035_10340" CDS 2127812..2129194 /locus_tag="RTM1035_10340" /note="COG0534 Na+-driven multidrug efflux pump" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /protein_id="jcventer:1101493006651_RTM1035_10340" /db_xref="CDD:30880" /translation="MQPRLTYRQHARAVLGLGLPLIGSHVAQFAITFTDAIMLGWYSV EALAAEVLGGTMFFVLFIMGSGFAWAVMPMVASAQATGAIPQVRRVTRMGLWASILFS LATLPLMLGSGALFDRMGQEPATAALAADYLEIAGLGILPALMVMVLKSYLAALERTA VVLWVTLGAVALNAAINYLLIFGHFGFPELGVQGAAIASLGVNIASFVVLGVYVHRSA PEHAIFQRFWRPDPEALGRVFRLGWPIGLTNLAEVGLFASASVMMGWLGTLPLAAHGI AMQITSVIFMIHLGLSNVATVRAGQAHGRGDGTALRDGARVVLGLSAAVALATMALLL LLPDLLVGLFLAPDDPDRAEVIAIGHQLLAAAALFQLVDAAQVQALGLLRGVQDTRVP MVIAALSYWAVGVPVSYLLGFTFGLGGPGIWLGLASGLALAGVFMLVRFWRWSVRQIP SQPSSLRQQG" gene 2129249..2130415 /locus_tag="RTM1035_10345" CDS 2129249..2130415 /locus_tag="RTM1035_10345" /note="COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases" /codon_start=1 /transl_table=11 /product="FMN-dependent alpha-hydroxy acid dehydrogenase" /protein_id="jcventer:1101493006651_RTM1035_10345" /db_xref="CDD:28787" /translation="MPVITNIADLKQIYRRRVPKMFYDYAESGSWTEQTFRENTTDFD KIYLRQRVAIDMTGRSTASQMIGQDVAMPVGLAPVGLTGMQHADGEIKAARAAEKFGV PFTLSTMSICSIEDVAENTTKPFWMQVYTLKDDEFMQRLFDRARDAKCSAAMITVDLQ MLGQRHKDLKNGLSAPPKLTPKSVANMMTKVHWGLGMLGTKRRFFGNIVGHAKGVTDP SSLSTWTSEAFDQALDWDRIRQFRKMWDGPLIIKGIMDPVDAREALNVGADAIIVSNH GGRQLDGALSAIRALPAIVDAVGDKIEVHLDSGIRSGQDVLKALSLGAKGTYIGRAFV YGLGAMGEAGVTRALEVIHKELDSTMGLCGRRDVKTLDRDILLVPEDFTGRWTV" gene complement(2130422..2131450) /locus_tag="RTM1035_10350" CDS complement(2130422..2131450) /locus_tag="RTM1035_10350" /note="COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10350" /translation="MPRRAFLHVGMPKCATTTIQAALVQRQEALRGLGIAYEMPEGPE AEGQGNAARLAISILRQREEAIAAALDFFSSGTGDVVLSSEAFSALYKSAAVIQYIEA LRARGFEVSVIALFRRQDHWLESDFKQHVKGAHTWDGTIAELLEKRTQQDVLNYALFT LYWGKYVGRDRVFTAVIQPGSARRDPVNFVLEQIGAGSLCYGEDADVPLANVSPPTGL IEPARLLKQEMRAAGASAGQVDVALDRFFAEAPGVIAVPKRRFLMPHALRQAVVDRWK GSNHDLVRRAEHRGAFDVDVAEDPASEVPLDEEARAVLAAWTAARGPAPAPEVQARRG FLRRLLGK" gene 2131615..2132241 /locus_tag="RTM1035_10355" CDS 2131615..2132241 /locus_tag="RTM1035_10355" /note="COG1825 Ribosomal protein L25 (general stress protein Ctc)" /codon_start=1 /transl_table=11 /product="ribosomal protein L25" /protein_id="jcventer:1101493006651_RTM1035_10355" /db_xref="CDD:32010" /translation="MAGEIPDLQAQERAGTGKGAARAARRAGMVPGVVFGGDKEPLAI NIPFNALLKRLKKGRFKSTLFNLQVEGHDDVRVICRDVQRDVVKDLPTHVDLMRLRRT TRINLFIHVDFINAEQCKALRKGGVLTVVRPEVELNVLAGDIPDHVTVDLSKVEKIGD VVTISMVDLPAGSEPVIKDRDFVICNISAPSALRSQGDDEEEEDGEED" gene 2132378..2133058 /locus_tag="RTM1035_10360" CDS 2132378..2133058 /locus_tag="RTM1035_10360" /EC_number="3.1.1.29" /note="COG0193 Peptidyl-tRNA hydrolase" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /protein_id="jcventer:1101493006651_RTM1035_10360" /db_xref="CDD:48346" /translation="MQLFVGLGNPGAKYERNRHNIGFMALDRIAEDHGFGPWRSKFQG MVSEGTLDGARTVLLKPMTFMNLSGQSVGEAVRFYKLIPADVTVFHDELDLAPGKLRC KTGGGHAGHNGLRSIHQHIGEAYARVRLGIGHPGHKDRVAQYVLQDFAKSEADWLDDL LRGIGKGAPWLAQGKPDRFQNAVAQAMTPPKPARPAPVQTDRAPPPEPEATPDPRSPM QKLMDKFR" gene 2133129..2134298 /locus_tag="RTM1035_10365" CDS 2133129..2134298 /locus_tag="RTM1035_10365" /note="COG1680 Beta-lactamase class C and other penicillin binding proteins" /codon_start=1 /transl_table=11 /product="6-aminohexanoate-dimer hydrolase, putative" /protein_id="jcventer:1101493006651_RTM1035_10365" /db_xref="CDD:31866" /translation="MGMRNALKWLGRILLLLVLATAAVGLWKRDQITRLWAVNSLFDA DRIVQNFSHMDRAFLSVPVPRGTGPVSPLPAGPAMTLPAVASDWITARNVTSLMVLHR GAVVHESYHRGTAPEDRRISWSVAKSFLSALFGVVIAEGQIASLDDPVTRYAPSLAGS AYDGASIRHVLLMMSGVAFDEDYLDYASDINRMGRVLALGGTMDGFAAGLTARDAAPG TRWQYVSIDTHILAMVLRGATGRSLPDLLSEKIIQPLGFDSEPYYLTDGEGVAFALGG LNVTTRDYARFGLMAANLGRYNGQQVVPEDWMRAATTPTAPTAPGDLQYGFQWWMPAD AQPGEFFGHGIYGQYIYIDRAREVVIIATSADRAFREPGVKHGNIAVLRQIARAL" gene complement(2134350..2137301) /gene="ileS" /locus_tag="RTM1035_10370" CDS complement(2134350..2137301) /gene="ileS" /locus_tag="RTM1035_10370" /EC_number="6.1.1.5" /note="COG0060 Isoleucyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="isoleucyl-tRNA synthetase" /protein_id="jcventer:1101493006651_RTM1035_10370" /db_xref="CDD:30409" /translation="MCADTTQTPGQTPDYKDTLNLPETDFPMRAGLPAREPEWLARWA RIGVYEKLREQAAGRVPFTLHDGPPYANGHLHIGHALNKILKDMVVRSQQMMGRDARY IPGWDCHGLPIEWKIEEQYRAKGMDKDKVDVVDFRQECRKFAEGWIDIQREEFKRLGI TGCWDRPYLTMDFRAERIIAEEFQKFLMNGVLYQGSKPVMWSPVEKTALAEAEVEYHD KESFTVWVKFEVVDPVSGDGSKLENRDLVGAYVVIWTTTPWTMPSNKAVVYGDGISYG LYEVTSTPEECWAKTGEKFILADTRAEDVMTRARLEKQHWKRVRDVDPTVISGLRHPL AGAEGGNGEWDDLRDFRAADFVSDEEGTGFVHCAPSHGMEEFELYRDLGMLEQVITYN VLEDGSFRPDLPFFGGKFILDRKGKEGNANKAVIDKLAEVGGLLARGKIKHSYPHSWR SKAPVIYRNTPQWFAAIDRAVGDGQDTYGTSIRERALRSIDELVTWTPKTGRNRLYSM IEARPDWVLSRQRAWGVPLTCFVKNGAQPTDSDYLLRNEEVNARILAAFEEEGADAWY KEGAKERFLSGIVNPDDWRKVDDILDVWFDSGSTHAFVLRDREDGSEDGLADLYLEGT DQHRGWFHSSMLQACGTRGRAPYRGVLTHGFTLDEKGNKMSKSLGNTVAPEEVVKQYG ADILRLWVAQADYTADLRIGPEILKGVADGYRRLRNTLRFMLGALAPFTEADRVDPAE MPELERWVLHRLAELDHKVKKGYETYDFQGVFQQIFNFCTLDLSAFYFDIRKDALYCD GDTARRRAARTVLDLLFHRLTTWLAPVLVFTMEEVWLSRFPGEESSIHLTDIPDTPAE WLNEPLAAKWAMVRQARRVVTAALEVQRTDKVIGASLEAAPVVHIRDAEMLTALKSVD FADICITSDLMLTGDPRPDEAFRLPEVDTVGVVFERAEGEKCQRCWKILPDVGQHKHP GTCGRCDAALG" gene 2137594..2138004 /locus_tag="RTM1035_10375" CDS 2137594..2138004 /locus_tag="RTM1035_10375" /note="COG2346 Truncated hemoglobins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10375" /db_xref="CDD:29978" /translation="MTATLPPRFPITRPEIERVVTAFYAAVRAHPGLGPIFAVHVTDW PTHEAKVADFWANSILHERVYDGSPMAAHVNARNVQPGMFSTWLALFDSVLLRELSPD QAASWSALAHRIGRSLRAGVVDRSTHAGGIPKLR" gene 2138188..2138436 /locus_tag="RTM1035_10380" CDS 2138188..2138436 /locus_tag="RTM1035_10380" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10380" /translation="MHIPQDDIQRQANRDLNRYGPPGHDPAAGTRGGLTGLLVVVILM GALIAFSMLSPSNTGDTTAPPSVIDGATSQQTPAAPVD" gene complement(2138507..2139130) /locus_tag="RTM1035_10385" CDS complement(2138507..2139130) /locus_tag="RTM1035_10385" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /protein_id="jcventer:1101493006651_RTM1035_10385" /db_xref="CDD:28977" /translation="MTDQALPPLLRVTRETGGAAAPEPLDLGARVRSLRKARGWTLEQ AAKQAGLARSTLSKIENGQMSPTYDALKKLAQGLEISVPQLFTPPSRDRINGRMAVTR VGEGTPKATATYEHDLLADALSQKRMMPYRARIRARSVEEFGGWVRHDGEEFLYVLTG VVRLFTEFYEPIEMRRGDSAYYDATMGHNVISVSVEDATVLWVTSLD" gene 2139198..2140724 /locus_tag="RTM1035_10390" CDS 2139198..2140724 /locus_tag="RTM1035_10390" /note="COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases" /codon_start=1 /transl_table=11 /product="benzoate-coenzyme A ligase, putative" /protein_id="jcventer:1101493006651_RTM1035_10390" /db_xref="CDD:30666" /translation="MTAIFDQGPSAPCPTPFNLAAHVLGRAEAQPDKIALAVLSLAKA DRWSYGRLLAAVRGTGTGLLRAGLTPGDRVLMRLGNTVEFPIAYLGAIAVGLIPIPTS SQLTAPEVAGMIETTQPALILRAAGVACPETDIPTLDEPTLEAMRDLPPADWHMGDPD RPAYIIYTSGTSGIPRAVVHAHRAIWARQMMSDGWYGLRADDRLCHAGAFNWTFTLGT GLMDPWTMGATALIPAPGITPEQLPLLLKRHDATIFAAAPGVYRKLFQPGASLSLPHL RHGLAAGEKLSDTIRQHWQNATGTPIYEAYGMSECSTFISGSPDHPAAPGTLGRPQTG RRVAILANGTPVPLGTEGTIAIHRSDPGLMLGYLGAPEATAEKFTGDWFLTGDQGMMD AAGHITYLGRADDMMNAGGYRVSPMEVESALSAHPGITAVAVTDIAVKEDARVIMAFY TGPQTLDPATLDAFARTRIAGYKAPRAYHHVAALPTGANGKILRRALRPIYEGLHGQA " gene 2140711..2141346 /locus_tag="RTM1035_10395" CDS 2140711..2141346 /locus_tag="RTM1035_10395" /note="COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis" /codon_start=1 /transl_table=11 /product="DSBA-like thioredoxin family protein" /protein_id="jcventer:1101493006651_RTM1035_10395" /db_xref="CDD:48573" /translation="MVKLDIISDPICPWCYIGKTLLDQALAQRPDHPFEIEWHPFQLN PDMPAEGMDRRDYLETKFGGKDGAIRAYAPVLERAEAAGLTIDFAAIKRTPNTLDAHR LLHWAGIEGCQDRMAMALFQAYFNEGRDIGDPEVLADLADSLSLDGAMIQRLLATEAD REDIRTRDAQFRQMGITGVPTFIVGGQHAVPGCQPTDLWVKVIDDLTAAAS" gene complement(2141350..2142225) /locus_tag="RTM1035_10400" CDS complement(2141350..2142225) /locus_tag="RTM1035_10400" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10400" /db_xref="CDD:31041" /translation="MENLRGSILMVLSMGGFALEDMFIKRLADTLPVGQIIILLGLGG ALIFGAMTRAQGGRLWSRDLVSRSVILRNCGELVGTLGFVMAIALTPLSSASAILQAT PLAVTLGAALFLGEAVGWRRWAAILVGFCGVLMVIRPGMAGFEPASLFAVLAVFGLAA RDLATRRVPRSISSMQLSTYAFATLVPTGVILLAFHGTPAMPTAVNWRDLALALLCGV SAYYAIVAAMRLGDVAVITPFRYSRLVFALIIGVTLFDERPDVWTLAGAGIIIASGIY TFWRERRLARRMALA" gene complement(2142305..2143222) /locus_tag="RTM1035_10405" CDS complement(2142305..2143222) /locus_tag="RTM1035_10405" /note="COG0053 Predicted Co/Zn/Cd cation transporters" /codon_start=1 /transl_table=11 /product="cation efflux transporter, CDF family protein" /protein_id="jcventer:1101493006651_RTM1035_10405" /db_xref="CDD:30402" /translation="MSDAGTVNARVMRLAIGSLIVGLIVLALKALAWALTGSLALMSD ALESLVNLATALAVIVALRVARRPADDNHPFGHHKAEFFSAVLEGVLIVIAALFILRE AYDGFQAPRAMDAPLLGMAINMAAGAINAIWALALIRNGRRYRSPALVADGKHLMTDV VSSVGVLFGVGLALATGWLWLDPAMALLVAVNILWSGSMVIKASLSGLMDEAVSEAEL ATIRRVIETAASDDAALQAHDLRTRHAGPVTFIEFHLVMPGATTVEAAHDLCDRIEAA LMAALPGARVTIHVEPEHKAKHSGHVVLS" gene complement(2143215..2143631) /locus_tag="RTM1035_10410" CDS complement(2143215..2143631) /locus_tag="RTM1035_10410" /note="COG0735 Fe2+/Zn2+ uptake regulation proteins" /codon_start=1 /transl_table=11 /product="ferric uptake regulator, FUR family protein" /protein_id="jcventer:1101493006651_RTM1035_10410" /db_xref="CDD:41521" /translation="MTETITERCEAKGLRMTEQRRTIASVLEGSDDHPDVEELYARAS GRDPRISIATVYRTVKLFEEAGILDKLEFGDGRARYEDAERDHHDHLIDMNSGEVIEF VDPEIEALQDKIAEKLGYRLIGHRLELYGVPIKSGE" gene complement(2143715..2144053) /locus_tag="RTM1035_10415" CDS complement(2143715..2144053) /locus_tag="RTM1035_10415" /note="COG2076 Membrane transporters of cations and cationic drugs" /codon_start=1 /transl_table=11 /product="small multidrug resistance protein" /protein_id="jcventer:1101493006651_RTM1035_10415" /db_xref="CDD:32259" /translation="MIPQVYLILFLAILAETAGTTALQASQQFTRFWPSVLVVVAYAI SFYLLAQTLKVMPVGVVYAVWSGLGIVFIACIGYVVFGQKLDLPAIIGTGMILAGIVV IQLFSRTTTH" gene 2144294..2144986 /locus_tag="RTM1035_10420" CDS 2144294..2144986 /locus_tag="RTM1035_10420" /note="COG4784 Putative Zn-dependent protease" /codon_start=1 /transl_table=11 /product="peptidase, M48 family protein" /protein_id="jcventer:1101493006651_RTM1035_10420" /db_xref="CDD:34394" /translation="MLKFTPILLAILYALAMYRFSVWRTSRELDAQSTELADPKLKAM TDRLARALDLPRVRVHIYEIDPVNGLAAPDGRIFITRGFYRKFQTGEVSAEEMASVIA HELGHVALGHSRRRMIDFSGQNALRTALAMILSRFIPGLGVWIANGLTTLLAARLSRG DEYEADAYAAALLTKAGIGTAPQKSLFEKLEALTNGAGGAMPAWLLSHPKTAERIAAI EKLENRWHQSLP" gene 2145169..2146485 /locus_tag="RTM1035_10425" CDS 2145169..2146485 /locus_tag="RTM1035_10425" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="Glutamate--ammonia ligase" /protein_id="jcventer:1101493006651_RTM1035_10425" /db_xref="CDD:40220" /translation="MDLTQFQTFRVAACDLNGRMRGKRLPAAHADKLSTGSVRMPLSS LNLDIFGADIENSPLVFDTGDIDGVLLPTDRGPVPLPWLEVPQGLVPMVMHHEDGTPF AGDPRHALVAVLDRYSAYGWHVAAATELEFTLVDGKGNTLKNIRDPRNGRRMKSPGIL SLGQMDAFDGFLSALYDAGLEMGLPVETAVSEAGIGQFELTLHHQNALRAADDTWLFK TLIKGLARQHGYVATFMAKPFEDDTGNGMHMHFSVMDKAGNNVFNDGTAAGTDVLRAA VAGCLAAMPPSTLIFAPHANSYARLVPGAHAPTGAGWGYENRTTAVRIPGGPPAARRI EHRVAGGDINPYLSFAAILGAAITGIEEGLTPPPPISGNAYEVEMPQLAADWATAIDW FEQDAMMARIFHPDLIRNLVMTKRQELAYMSPIPKEDHWKTYLETV" gene 2146533..2147228 /locus_tag="RTM1035_10430" CDS 2146533..2147228 /locus_tag="RTM1035_10430" /note="COG0518 GMP synthase - Glutamine amidotransferase domain" /codon_start=1 /transl_table=11 /product="glutamine amidotransferase, class I" /protein_id="jcventer:1101493006651_RTM1035_10430" /db_xref="CDD:28853" /translation="MKIGILKTGHAPDIVQDELGDYEVMFAQLLDGHGFEFDHYNVVD EEFPTGPDAADGWLITGSKHGAYEDHPWIAPLEQLIRDIHASGRPLVGVCFGHQIIAQ AMGGKVEKFGGGWQVGVTDYDIEGQRLPLNAWHQDQVTELPKGAEVVGSSAFCENAAL LYGDRIYTIQPHPEFTATMIDRLIHHRAPGVVPPDLIAAAKSKLDHPTANATIAARMA EFFKRGASHGRSK" gene 2147212..2148579 /locus_tag="RTM1035_10435" CDS 2147212..2148579 /locus_tag="RTM1035_10435" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="glutamine synthetase family protein" /protein_id="jcventer:1101493006651_RTM1035_10435" /db_xref="CDD:40220" /translation="MADLSELTNSLPKTAQTYLENRRLDEVECIISDLPGIARGKAVP ATKFARQKYFHLPDSIFFQTITGDWGEAAGEGGFIERDMILRPDMSTATAAPWTADWT LQVIHDAFDREGAPIPFSPRNVLRRVVDMYHAHGMNPVVAPEMEFFLVARNLDPAHEI KPMMGRSGRPAAARQAYSMTAVDEFGPVIDDIYDFAEAQGFEIDGITQEGGAGQLEIN LRHGDPIKLADEVFYFKRLIREAALRHDCFATFMAKPIADEPGSAMHIHHSILDMETG RNIFAGPQGGETDAFFHFIGGLQKHLPSAIAVLAPYVNSYRRYVKDHAAPINLAWGRD NRTTGIRVPLSGPEARRVENRMAGMDCNPYLGIAASLACGLLGILNEDWPDKQFKGDA YSGEPDIPNVMGDALDMFEEAKALHEILGPEFARVYAIVKRTEYEEFLQVISPWEREH LLLNV" gene 2148628..2149932 /locus_tag="RTM1035_10440" CDS 2148628..2149932 /locus_tag="RTM1035_10440" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase" /protein_id="jcventer:1101493006651_RTM1035_10440" /db_xref="CDD:31009" /translation="MNLLYSNDRRGCYPPSWYAATATPLPEFAPLRGTERADVCVVGA GYTGLSAALHLAEAGFDVVLLEAQRVGFGASGRNGGQLGSGQRMEQTALERLVGAEDA LHLWHLAEEAKDLVKSLVARHGIDCHLKPGVAHACFSAREMAAEHDYADHLAARYGYE QIEKLDAAGFAALCPSPAYHGGTLDMGAAHLHPLGLALGLARAALAAGVRIHEGSAVH QITRGAKLRVATDAGSIEADHLILACNGYLGGLERKVAARVMPINNFIVATEPLGDAA ARVLARDVAVADTKFVVNYFRLSHDKRLLFGGGESYGYRFPKDIRATVRKPMLEIFPH LRDTKLDYAWGGTLAITMRRMPYLARLAPNILTASGYSGHGVGTATHAGRLMAEAVRG EASGFDCMARVPAPAFPGGTALRSPLLVLAMTWFSLRDRLGL" gene 2150056..2151264 /locus_tag="RTM1035_10445" CDS 2150056..2151264 /locus_tag="RTM1035_10445" /note="COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis" /codon_start=1 /transl_table=11 /product="aminotransferase, DegT/DnrJ/EryC1/StrS family protein" /protein_id="jcventer:1101493006651_RTM1035_10445" /db_xref="CDD:41110" /translation="MALAPNVYDAEPIPEAARAEIDRMLQSGDLFRYTAPENAPVTLL EREFAALLGSKYALAVSSCSAALFLSLKALGLPRDARVLIPGFTFAAVPSSVLHADCV PVLCEVGENYRIDIADFTARLDTVQAVIISHMRGHTSDMDAIMALCAARNIPVIEDAA HSLGTTWGGRNIGTIGQIGCFSFQSYKLVNAGEGGIMVSDDADLIARAVIMSGAYEHN WAKHLTAPDAALEAAFARAQNQLPLYNLRLNNLSAAIIRPQLAEVARRVRDGRTNHDY VAARLNTSPWMQVPEKLPREERAPDSIQFNLEGMTEDDTRAFAQAAADRGIKVQVFGL STDNARAFWNWQFLPGAAPVLPKTRAMLMRACDTRLPARLTRPDLDLIADALVLAAED VMGRSRAYGT" gene complement(2151325..2151900) /locus_tag="RTM1035_10450" CDS complement(2151325..2151900) /locus_tag="RTM1035_10450" /note="COG2353 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10450" /db_xref="CDD:44177" /translation="MKNILLATALALTATGAVAAPEKYELDPSHSQVVFSYNHLGFST TYGMFSGFAGEIMFDAEDPAASSVNVSMPVMSMFTGWEKRDEHFMSEDFFGATEGDMV TFTSTGIEVTGDTTALITGDLTMNGVTKSVVLDARLNQKADAHPMNSKPWVGFDATTT LLRSDFGVDKFTPFVSDEVAVQISVEAGKAE" gene complement(2152033..2152548) /locus_tag="RTM1035_10455" CDS complement(2152033..2152548) /locus_tag="RTM1035_10455" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10455" /translation="MTMVALPDFEREFTHAPFDYYESTGHAQAEAPALDLGRATQTLC GSALIFSAFGLWLVSAGAQDSAMMMIKLLFFVTLLFAGLMCLSRARAVQAGPEIQVDV MNRRLHVIAPVAGGRAARVAVHDLDSLSELSMRDRVLTARDAAGRQIVAMKIEDRATA KALRRALGFPA" gene 2152778..2153203 /locus_tag="RTM1035_10460" CDS 2152778..2153203 /locus_tag="RTM1035_10460" /note="COG0360 Ribosomal protein S6" /codon_start=1 /transl_table=11 /product="ribosomal protein S6" /protein_id="jcventer:1101493006651_RTM1035_10460" /db_xref="CDD:30709" /translation="MPLYEHVMIARQDLSSAQAEGLIEHFGAVLTENGGTLVEHEYWG VKTMAYKINKNRKGHYAFLKSDAPSSAVQEMERLMRLHDDVMRVLTVKVDAHEEGPSV QMQKRDERGDRPDRGDRPDRGDRPDRGDRPDRGERRERR" gene 2153233..2153460 /gene="rpsR" /locus_tag="RTM1035_10465" CDS 2153233..2153460 /gene="rpsR" /locus_tag="RTM1035_10465" /note="COG0238 Ribosomal protein S18" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S18" /protein_id="jcventer:1101493006651_RTM1035_10465" /db_xref="CDD:41150" /translation="MATKPFFRRRKVCPFSGDSAPKIDYKDTRLLQRYISERGKIVPS RITAVSAKKQRELARAIKRARFLALLPYAVK" gene 2153472..2154074 /gene="rplI" /locus_tag="RTM1035_10470" CDS 2153472..2154074 /gene="rplI" /locus_tag="RTM1035_10470" /note="COG0359 Ribosomal protein L9" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L9" /protein_id="jcventer:1101493006651_RTM1035_10470" /db_xref="CDD:30708" /translation="MQVILLERVAKLGQMGDVVDVKPGFARNYLLPQGKALSASEKNI SDFANRKAQLEAQNLETRKEAEAMADKLNGQQFIVIRQASDSGALYGSVSTRDAADAA TENGFTVERKQVALTRPIKDLGLHDVLVTLHPEVVAMIQLNVARSVEEAALQASGKSI QDAAAEADQAADFEIAELFDDIGGAAGDDDDYSDRRDNNA" gene 2154496..2155170 /locus_tag="RTM1035_10475" CDS 2154496..2155170 /locus_tag="RTM1035_10475" /note="COG2771 DNA-binding HTH domain-containing proteins" /codon_start=1 /transl_table=11 /product="autoinducer-binding transcriptional regulator LuxR" /protein_id="jcventer:1101493006651_RTM1035_10475" /db_xref="CDD:43398" /translation="MIQVDPFRQFLDDLRNRFELDHVAYAGMNPISGQSHGHMTYGAD WTSHYLQHKYYEIDPTLLKARHSIAPVDWNRLERGAEFQTIFQAARDFGISDRGLTIP IHGPYGDVGGLSINRDCSEREWQLLISGIIGNLQAAAVHMHDMVIQSDPLTRMLNTPS LSTREIEILQWTAAGKSQQDIGDILSISHRTVEVHLRSARQKLNALTTPQAIGRAINL GLIYPR" gene 2155273..2155362 /locus_tag="RTM1035_10480" CDS 2155273..2155362 /locus_tag="RTM1035_10480" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10480" /translation="MVYFVEFTNLKIAEYTTHTGHATFGETQR" gene 2155359..2156153 /locus_tag="RTM1035_10485" CDS 2155359..2156153 /locus_tag="RTM1035_10485" /note="COG3916 N-acyl-L-homoserine lactone synthetase" /codon_start=1 /transl_table=11 /product="autoinducer synthesis protein" /protein_id="jcventer:1101493006651_RTM1035_10485" /db_xref="CDD:40845" /translation="MILVIDAINKDRFSHVLDEMFKLRARVFGDRLGWQVEVKDGRER DLFDDLNPAYAVGLDDEGNVVSCVRALQTTGPHMLADVFADILDGEPPLRSATLWEST RFCVDTRRLGRGRDRNSVSYATCELMIASLEAAKSAGVSDIVTVIDPVMDRVLKRSGN APYDYVGKTADMGKVPALAALLDCTDERIDRIRAFGGVEGDVFISDDAALALPAIAGH VTPKTPLEQYCDEQIASATSEKERIAALRLKAALEDKIRSRMDQRA" gene complement(2156281..2157612) /gene="tig" /locus_tag="RTM1035_10490" CDS complement(2156281..2157612) /gene="tig" /locus_tag="RTM1035_10490" /note="COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)" /codon_start=1 /transl_table=11 /product="trigger factor" /protein_id="jcventer:1101493006651_RTM1035_10490" /db_xref="CDD:30890" /translation="MQVTETLNEGLKRGYKMILSAKDLDEKVNAKLKEAQPDIEIKGF RKGKVPLPLLKKQFGQRVLGEAMQESVDDAMKAHFEAKGERPAFEPDVKMANQDWKEG DDVEIVLSYEALPAIPDVDLKSLKLERLVAKADDAAVDEALKNLAENAQDFKDRKKGS KSKDGDQVVIDFVGKVDGEAFDGGSAEDYPLVIGSGSFIPGFEEQLVGVKVEEVKAVT VTFPEAYQAAHLAGKEAVFDCTVKAVKEPVAAEINDELAQKYGAEDLAALKTQISERL EMEYAGAARAILKRHVLDQLDEKVSFDLPPSMVDAEAKQIAHQLWHEENPDVQGHDHP EIDVTEEHIKLAERRVRLGLLLAELGQKAEVQVSDAEMTQAVMNQARQYPGHEREFFE FVQKNPQMRQQLRAPIFEDKVIDYVVELAEVTDKELSKEELEKAIEAMNDE" gene complement(2157734..2157815) /locus_tag="RTM1035_t11898" tRNA complement(2157734..2157815) /locus_tag="RTM1035_t11898" /product="tRNA-Leu" gene 2158044..2158487 /locus_tag="RTM1035_10495" CDS 2158044..2158487 /locus_tag="RTM1035_10495" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10495" /db_xref="CDD:47634" /translation="MDTCGLLADSIILTLDGERRVADLNVGDRVITRDSGTAVLRGIA RHRLRTAAVRIMAGTLGHTRPERDVTLPAGQLLLVRDWRAKALFGDTQALVSATRLVD GEFVTLEAAQEMTLFSLDFAAPHILYVDGLELASNADMRLDARAA" gene complement(2158424..2160004) /locus_tag="RTM1035_10500" CDS complement(2158424..2160004) /locus_tag="RTM1035_10500" /note="COG0062 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="YjeF family protein" /protein_id="jcventer:1101493006651_RTM1035_10500" /db_xref="CDD:30411" /translation="MLEILTATEMRAREQVAIESGGVTGLDLMERAGRAVVEAVFAEW PELAQTPQTAAVLCGPGNNGGDGFVIARLLKAWGWEVGVYLYGDPERLPPDARINHDR WCAMGSVHDLAQASVEGLKVALMVDALFGTGLRRPLEGVAQQGLNQLAARVVAVDLPS GLCSDSGRVLGMVSNAVRAALTVTFHAPKLGHVLADGPAVCGRVMVADIGLAAQAEGA VRLIAPPDAQSLNKAETAHKFGHGHALILTGGAGTTGAARLAARAALRIGAGVVTLGV PPSAQMEVAAQITALMLRRIEDGQTLHAALTDKRITALCSGPGMGTARARDLVPVVLR HESAPRVVLDADALTAFADAPETLFGLLHEGCVLTPHGGEFTRLFPDIAARLAAPATQ GPAYSKVEATREAAKRAGCVVLLKGADTVIAAPDGACAIHAAAYGRAAPWLATAGAGD VLAGFIAGLLARGFPPMQAAETAAWLHGECARCFGPGLIAEDLPEVLPKVLRALPDQA ARASSRMSALLANSNPST" gene 2160177..2160515 /locus_tag="RTM1035_10505" CDS 2160177..2160515 /locus_tag="RTM1035_10505" /note="COG0347 Nitrogen regulatory protein PII" /codon_start=1 /transl_table=11 /product="nitrogen regulatory protein P-II" /protein_id="jcventer:1101493006651_RTM1035_10505" /db_xref="CDD:30695" /translation="MKKIEAIIKPFKLDEVKEALQEAGIQGLSVIEVKGFGRQKGHTE LYRGAEYVVDFLPKVKIDVVLDDDQVDAAIAAIIDAAKTDKIGDGKIFVSPVEQAIRI RTGESGSDAL" gene complement(2160519..2161958) /locus_tag="RTM1035_10510" CDS complement(2160519..2161958) /locus_tag="RTM1035_10510" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10510" /translation="MQSAAVIHAEFDRVRCVLVFVDFVHLERDVGLDLVFGEHVACQQ EIVISGQTIQCFAQRATDGRDVFQLFGGQVIKVLVHGFAGINLGFDTVEASHEQSGKR QIGVCARIRETGLYALGLGAFGPRNTDATRTVAGRIGAQNGGLETGDQPLVAVGAGVG EGVQRLGMLENATDEIQRLLAEVGIFVTGKKRLAVFPDRHVHMHARPVVAIDRLGHEG GGFAIGMRHVVNDVFVFLNLVGLLGQRAENQTQFVLAACDFMVVFIHLHADPLHGREH FGAQVLGVVDRVYREIPALEARTMAGVAHLVFGVTVPRRVNSVYLIRDFVDGVREAHV VKDEEFSFGAKIGHIADTGRLEICLGFFCRAARIAIVGFAGVGFNNRAMDAKCLFRVE RIDICTLGVGHQLHVGSLDRLPARDRRSVEHKAFFEEILIDQVRDHGHMLKFTAHVGE PDIDVVNILILDQLENCVFAHSLVLFLLG" gene 2160546..2161952 /locus_tag="RTM1035_10515" CDS 2160546..2161952 /locus_tag="RTM1035_10515" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="glutamine synthetase, type I" /protein_id="jcventer:1101493006651_RTM1035_10515" /db_xref="CDD:40220" /translation="MSKDAVLKLIKDEDVDYVDIRFTDVRGKLQHVTVVADLVDEDFL EEGFMFDGSSISGWKSIEASDMKLMPDTESAYVDPFYAEKTLCIHCSVVEPDTGESYD RDPRGTAEKAEAYLKSSGIGDVAYFGPEAEFFIFDDVRFSNTINKVSYQVDAVDASWN SDTEYEMGNTGHRPGLKGGYFPVNPIDDAQDLRAEMLSTMKRIGMKVDKHHHEVASCQ HELGLIFGTLTKQADEIQKYKYIIHNVAHAYGKSATFMPKPIYGDNGSGMHVNMSIWK DGKPLFAGDKYADLSQEALYFIGGILKHAKTLNAFTNPGTNSYKRLIPGFEAPVLRAY SARNRSGCVRIPWTESPKAKRVEARFPDPSANPYLAFSALLMAGLDGIKSKIDPGEAM DKNLYDLPAEELKDIPTVCGSLREALDCLAADHDFLLAGDVFTKDQIEAYIALKMDEV HKYEHTPHPVEFGMYYSC" gene 2161995..2162081 /locus_tag="RTM1035_10520" CDS 2161995..2162081 /locus_tag="RTM1035_10520" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10520" /translation="MPFFYALHRCVFGINLSIFDELPKLILI" gene 2162238..2163020 /locus_tag="RTM1035_10525" CDS 2162238..2163020 /locus_tag="RTM1035_10525" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10525" /translation="MVLDWLDEQTTGLRILSDCEANLNSDHFVLRIEIQQDHKLSALS QPAEHFLALSLLQTDPEAPPQTQLALSVMAHVLRALHSTLAPDFVQWIHPLALLSHAE FLEAVTFQDEYEPAAPQAEIVPHPNAAAARCRLPDIELTHQALHARYVSESDAAPEDH VAGALRAVFRDSLETTPAATIQTDSIRESTAPLRLSVWILTITLGLFALPVAAALAIV NLMRGENLRLASQTAAMTGLFLTLQVNGATAQALQAMQDLLG" gene 2163112..2163930 /locus_tag="RTM1035_10530" CDS 2163112..2163930 /locus_tag="RTM1035_10530" /note="COG2951 Membrane-bound lytic murein transglycosylase B" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10530" /db_xref="CDD:32773" /translation="MFTTMMRPLQPLTMALGFSLLATSALAAPCGNSADGFSNWKAAF AKEAAAEGVGPRGLEALAGAQYASSTIAADRNQKSFKYSLEKFMQVRGAPTIVAQGRK RRAQDAAFYDALERQYGVPAGVLLAIHGMETGFGGFMGDSAVVSAIVTLTYDCRRSDF FRPHAVGALKLVDRGAITAQTKGAKHGELGHTQFLPGNALNYGVDANGDGRVDFYNLT DALASTANFLRQKGWQPGQGYQEGQPNFAVIQQWNAAGVYQKAIALMAAQIDGG" gene 2164014..2164706 /locus_tag="RTM1035_10535" CDS 2164014..2164706 /locus_tag="RTM1035_10535" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10535" /translation="MSRQNYGQIAALEFFDPPEMDFPDIVEEFDIASQRLAPQLRRLT WDGEDIALIDRDAVRIALGWLPAQGFDQPSYLVLAVGPRNAKRNITLDPEAYEMLTRR LVERVRGYLPFDAVLHGAANRPISSALLDMTFELLSGCANEATQHRRPTPAPRQSRPR RQEHRGQSSARPKHPIPEDAVDARLAVPEASLPMRLTIVTFGLTLFLHVPPLGAALLA YTTLREAQPLLS" gene complement(2164728..2165462) /locus_tag="RTM1035_10540" CDS complement(2164728..2165462) /locus_tag="RTM1035_10540" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10540" /translation="MTEILQTRLPYDPEAAHALPGISPLLMADWLQVDEAFAGQMAER ARLLSEQRAKVLAVTDGAGPAADELLQFVLDWLQEYGQGYGVSAKQVQRPDGVIVPID RTDPMGTLGHLVQEDLCLMERRGDEHVLTAAVLCFPASWHLADKIGRPLTTIHVPVKT YDEALARRVQRLFDGVQEGRPLWRFNALRYADPTLHQPRSRVQPSAEAAYPYLRSERQ CVLRLPQTRACVFSIHTYVLARKDVC" gene complement(2165472..2165912) /locus_tag="RTM1035_10545" CDS complement(2165472..2165912) /locus_tag="RTM1035_10545" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10545" /translation="MTHTVTLDDFTGVWTLERVIQHEDGASARFSGRAVWKPHPKGLA YHETGEMVLETGARFLAERRYLWSVDLSVWFEDGRFFHTVPAQGGLTAHWCDPDQYDG HYDFADWPAFTVTWHVRGPRKDYRMETRYHRSDDFADAAAQALG" gene 2166032..2166301 /locus_tag="RTM1035_10550" CDS 2166032..2166301 /locus_tag="RTM1035_10550" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10550" /translation="MNTTRHTDPNPQATPGEQILLAQLHQVQRALEHAYAERQRQEAE TAACAQRVQTLEAELNQAQAHLNAVLASRSWRITAPLRRLFTRGK" gene complement(2166309..2167328) /locus_tag="RTM1035_10555" CDS complement(2166309..2167328) /locus_tag="RTM1035_10555" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10555" /db_xref="CDD:40929" /translation="MTIKVHPFGDYAHRQPLAYDPIRRACAPAITVTDTFDAADIILL AHTKDLDRHAEALAPRLAAHQRLVLLSEEPLWDCVWAKDPLTPAQVVETEAGPLPYVF LNHVTSDIYEFERIPYFLLTDYAYPTRYGCWFAQNARLSQEDWTARFAEAKWDMAFVA EYRDEPRFDAAFPEAGFYGLGRWRTRLALACTGERLLRMGAGWNVLPRRQILPDWHLE KYLDLRGRCAVLSAVENTYHRSYITEKLFDSLAIGAVPLYVAGADHRVHDLLPQGAFV NLNGLTPEAAAERIAGFAADPQTLSAYCEAQARMAALFNTPSLLCAEYERLAQALTRN LAALI" gene complement(2167496..2168383) /locus_tag="RTM1035_10560" CDS complement(2167496..2168383) /locus_tag="RTM1035_10560" /note="COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis" /codon_start=1 /transl_table=11 /product="Twin-arginine translocation pathway signal" /protein_id="jcventer:1101493006651_RTM1035_10560" /db_xref="CDD:42401" /translation="MITTRRRFLSITAAALAAPSAAMAAQTAHWQGRAMGAPARLAIA GLSPDAARPVFAAIEAELERLEQIFSLFRPDSSLSWLNRSGRLVAPPPELLDVLLLAD RLHHASGGVFDPTVLPLLEVGTFGHARAKVFGLIGWNKVYIDPREICFAKTGMALTLN GIAQGYINDKIADLMRARGLTDVMLDIGELQGIGQCPLHRPWQARIFATDGAYEDHIV LRNRAVSTTRPFGGLRPGGGDHVVCPDGHTPFHSIVTVSAPRAAVADGLSTALALIPR EETLAVVAQFPGARIEMIR" gene complement(2168602..2168937) /locus_tag="RTM1035_10565" CDS complement(2168602..2168937) /locus_tag="RTM1035_10565" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="VanZ like protein" /protein_id="jcventer:1101493006651_RTM1035_10565" /translation="MVKILTALMTLAIGVTTLMPSTGGHSPLLGLDKLAHLVAFAALV IPMTLAHPRSWALIWLVALSYGGLIEIVQPHFGRGAEWADFVADGLGAAMGIALALIL RRRLPAFRQ" gene complement(2168981..2169223) /locus_tag="RTM1035_10570" CDS complement(2168981..2169223) /locus_tag="RTM1035_10570" /note="COG3809 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10570" /db_xref="CDD:33603" /translation="MQCPIDGTQLVLAERAGVEIDYCPQCRGVWLDRGELDKIIDRSA SAPATAAPAYESRDQDDRGQRPRKKRGGFLEDLFDF" gene complement(2169306..2169713) /locus_tag="RTM1035_10575" CDS complement(2169306..2169713) /locus_tag="RTM1035_10575" /note="COG0589 Universal stress protein UspA and related nucleotide-binding proteins" /codon_start=1 /transl_table=11 /product="universal stress family protein" /protein_id="jcventer:1101493006651_RTM1035_10575" /db_xref="CDD:40668" /translation="MYAHILVPISFDQDRDSNAALRAARLLAGETGRISLLHVIEQVP GYAISYLPQGYVNEARKAIEVELAEIAASLPNASAHVVEGHSGRTILDWAEAHTPDCI VIASHRPGMQDLLLGSTAAKVVRHAACAVHVIR" gene complement(2169791..2170078) /locus_tag="RTM1035_10580" CDS complement(2169791..2170078) /locus_tag="RTM1035_10580" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10580" /translation="MTQDNRPTDELTREVAALRRELQTLNAHRFIRVHNSVPRMLAFS LVRGLAAGLGTVLGATVLLSVMIWALSQIEFLPIIGDWAAQIAAQVRDMQN" gene complement(2170075..2170395) /locus_tag="RTM1035_10585" CDS complement(2170075..2170395) /locus_tag="RTM1035_10585" /codon_start=1 /transl_table=11 /product="Antibiotic biosynthesis monooxygenase" /protein_id="jcventer:1101493006651_RTM1035_10585" /db_xref="CDD:43909" /translation="MPHITTDTDHQTVLTTFEVTPGTCQDLMDLLTAAYRDFISQQPG FIAAGLHVNDAQTRIANYSQWRARSDFQAMLRSDEMRARNREISALCKGFEPVMYDVV ATFG" gene 2170484..2171167 /locus_tag="RTM1035_10590" CDS 2170484..2171167 /locus_tag="RTM1035_10590" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10590" /translation="MKVNAEVTMQLRPLFAVLILPWLVGMAEAGAWPRAKGQIFIAAT GQLDAPDETGLARQSFTLYAEYGATERLTLGVDLGGDALQMTKTIVFARWPVGRPARK VKIAVELGLGEVAEQRALRPGVSLGRGLTLWGRHGWAAFDGRAVMFSGGQMTLESDIT LGLDITARGKVIAQIQTGQPAKGQTYVRFAPSYVHATKPGAHLEFGLILPLTDGGERG VKLGLWRSF" gene complement(2171195..2173483) /locus_tag="RTM1035_10595" CDS complement(2171195..2173483) /locus_tag="RTM1035_10595" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10595" /translation="MNKAITDGIVFMPPPFANGLDQWSRGDGRPGSDTYANAVDAAFV PADQDFGGALELQKTEAVQRLRSMGETPILPGCYLQIRARIKAIAGNLPSVRIAAFAG GAGGAALPGVTVTGPQVALTTYGAVVEVTAIVGTGTRTGVDMPWGRAAIFGHFGLDLS GPSGGVVRIDDIIIEDVSRFFLRDILSTVDVRDYGAIGDGVTDDHAAFEAADTAAQGR EIIVPAGQYFLGQSTTIQNRIRFEGTLVMPDAAILALTKNYDLPAYIDAFGDSELAFK KAYQALLNNPDHVTLDLAGRKVALRGPVDMAAAVNNRSTYNQRHVIQNGQFTIRGGPA WATDVVTSQASYDIANPLRLTNVIDVANIPVGALIEGNGVGREVYVSAKNVAAQRLDI SQPLFDAAGTQVFTFRRFKYLLDFSGFDDVSRMVFSEVDFQCTGDCSGVLLPPQGSAN HFRDCFFTRPKDRGITSHGEGDQGMMIDRCQFISDEGPLLSTERRSIAFNANANDLKI RDNRSVLFRHFAVLAGSSSLISGNHVFQGDTSQGGARVAGFVLTRINNRGSVSGNYID NCFIEWVNEHDAEPEFASEFSFSALSITDNVFLAGNMAPWFTYIVVKPHGAGHFLDGV TVTGNTFRTIGTITRVEMVDTSFADLNYDRVRNVTFANNSFHNINIPVASPLVMQHTE ESATATWEVEPAPRLPFGAWAQTVEAVIPAGPLRNAANAVVYAAPYFEAQQGPNRDRI NLRWPSPVSGSVVLRIRIDDPL" gene complement(2173717..2173950) /gene="acpP" /locus_tag="RTM1035_10600" CDS complement(2173717..2173950) /gene="acpP" /locus_tag="RTM1035_10600" /note="COG0236 Acyl carrier protein" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /protein_id="jcventer:1101493006651_RTM1035_10600" /db_xref="CDD:30585" /translation="MSDIADRVKKIVVEHLGVEEDKVVDKASFIDDLGADSLDTVELV MAFEEEFGIEIPDDAADTIQTFGDAVKFITEAS" gene complement(2174181..2174918) /locus_tag="RTM1035_10605" CDS complement(2174181..2174918) /locus_tag="RTM1035_10605" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) reductase" /protein_id="jcventer:1101493006651_RTM1035_10605" /db_xref="CDD:40206" /translation="MFDLTGKSALVTGASGGIGAAIARALHGAGATVGLSGTRVEPLE ALAAELGSRAHVLPCNLGDAEAVEALAKEAVGALGGLDILVNNAGITRDQLFMRMSDK DWHDVLDVNLTSAMRLCRGAVRPMMKARWGRIINIGSIVGASGNLGQANYSAAKAGLV GMTKSIAAEVASRGITANVVAPGFIATPMTDKLSDDQKAGLNAQIPMARMGTAEEIAA AVLYLASPEAGYVTGATLHVNGGMSMY" gene complement(2174951..2175898) /locus_tag="RTM1035_10610" CDS complement(2174951..2175898) /locus_tag="RTM1035_10610" /note="COG0331 (acyl-carrier-protein) S-malonyltransferase" /codon_start=1 /transl_table=11 /product="acyl-carrier-protein S-malonyltransferase" /protein_id="jcventer:1101493006651_RTM1035_10610" /db_xref="CDD:30679" /translation="MSRAFVFPGQGAQVIGMGADLAASYPAARAVFDEVDEALGQKLS ALIWEGAQDELTLTENAQPALMATSIAALRALEAEGVNLAKAASHVAGHSLGEYSALA AAGAISVADTARLLRIRGQAMQQAVPVGVGAMAALLGLDFETARAVAQEAAQGEVCQA ANDNDPAQVVVSGHKSAVERAVELAKARGAKRAMLLPVSAPFHCALMAPAAEVMAKAL SEVAIHAPAVPLVANVRAQAVTDPAEIRALLVEQVTGSVRWRESVQYMEAQGVTEIWE IGAGKALSGMVRRIARDLSCRTIGTPDEVTAAAASLTEK" gene 2176103..2177314 /locus_tag="RTM1035_10615" CDS 2176103..2177314 /locus_tag="RTM1035_10615" /note="COG3038 Cytochrome B561" /codon_start=1 /transl_table=11 /product="cytochrome, putative" /protein_id="jcventer:1101493006651_RTM1035_10615" /db_xref="CDD:32852" /translation="MQRTNSATSYGSIAKGFHWLTALLILSNLPLGWYATKVAEAVAA SPTEPLIAQATFLFSLHKTLGVTIFFVALARILWAMSQPKPGLLNGDRRLEAWAAETA HWLLYGSLVLVPLSGWVHHAATSGFAPIWWPLGQNLPLVPKSEALSDLASTLHFVFVL VLLGTIAAHVGGALKHHLLDGDATLRRMLPGRMDAIPTARQPNPVLPMVAAVAVWLGT LGGATALGWFDTTQTGPTTLAAVESDWQVESGQLQVTVQQMGSAVTGSFEEWTAEIAY SETPDADGKHGDVTVTVSIASLSLGSVTQQAMGADFFNTAEFPTAIFAADLMSGETGP VARGTLTIRDQSVPVEMPFDLTITGDSAMAMGTLALDRRNFNIGNGVTDEKSLGFGVD IRFELTATRGN" gene complement(2177311..2177505) /locus_tag="RTM1035_10620" CDS complement(2177311..2177505) /locus_tag="RTM1035_10620" /note="COG2835 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10620" /db_xref="CDD:43883" /translation="MTEDTPPPPAFDRRMLEALICPQTHVTLEYDAAAQELISRRASL AFPIRNGIPVMLIDEARRLD" gene complement(2177502..2178149) /locus_tag="RTM1035_10625" CDS complement(2177502..2178149) /locus_tag="RTM1035_10625" /note="COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease" /codon_start=1 /transl_table=11 /product="Putative ATP-dependent protease La, LON" /protein_id="jcventer:1101493006651_RTM1035_10625" /db_xref="CDD:32634" /translation="MTHKLDLPEIIPVFPLPGALLLPRSRLPLHLFEPRYLAMLEDAL KTPGRLIGMIQPNRVPGRAGGTGLHAIGCVGRVTQFSETEDGRYMITLTGLSRFRVLE EVEGFTPYRRARVSWTGFERDLGPVDSDPDFDRRAFLRLLARYFEARELQTDWDSLKE AEDELLVNSLSMLLGFEPEDKQALLEAPSLSTRRETLITLIEYVLRGGDNEDIMQ" gene complement(2178176..2179093) /locus_tag="RTM1035_10630" CDS complement(2178176..2179093) /locus_tag="RTM1035_10630" /note="COG3118 Thioredoxin domain-containing protein" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="jcventer:1101493006651_RTM1035_10630" /db_xref="CDD:32932" /translation="MLELGKTKSAPATGDLIKDVSEASFMADVVDASQTVPVIVDFWA PWCGPCKTLGPALEAAVTRANGAVKMAKINVDQNQMIAGQMRVQSIPTVYAFWQGQPI DGFQGAVPPSEIEAFVARVIAAAGGEPEDGLDEALDAADEMLETGAVADAAQTYAAIL QEDPLNARGYAGLARAHMALGELDQAEAILNGAPAEISHAPEIDAAHAQLALARQAQD AGPVNELRAAVEADPANLQARFDLAQALYANGQAQEAVDELLDLFRRDREWNDGAAKT QLFTIFEALKPNDPVLLSGRRKLSSMIFA" gene complement(2179146..2179934) /locus_tag="RTM1035_10635" CDS complement(2179146..2179934) /locus_tag="RTM1035_10635" /note="COG0708 Exonuclease III" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease III" /protein_id="jcventer:1101493006651_RTM1035_10635" /db_xref="CDD:31052" /translation="MSFTLATWNINSVRLREGLVARLMQEEGPDILCLQECKSPVDKM PLEGFAALGYAHVVARGQKGYNGVAILSKLPIEEVGAMDFADLGHARHIAGRLENGVV IHNFYVPAGGDVPDRAVNDKFGQKLDYLTGMRDWFHDSRPEKAILVGDLNIAPREDDV WNHKQLLKIVSHTPVEVDHLSAVMAAGGWQDVTRADIPEGQLYSWWSYRAADWDAADK GRRLDHVWATGDIATSAHSSRILRGARGWEQPSDHAPVFATFDL" gene complement(2180164..2180850) /locus_tag="RTM1035_10640" CDS complement(2180164..2180850) /locus_tag="RTM1035_10640" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator" /protein_id="jcventer:1101493006651_RTM1035_10640" /db_xref="CDD:31088" /translation="MGQVKKILLVDDDDDLREALGEQLVMTEDFDVFEASSGASALSK VKDMIYDLVILDVGLPDTDGRELCRLMRKQGIKAPILMLTGHDGDADTILGLDAGAND YITKPFKFPVLLARIRAQLRQHEQSEDAVFQLGPYTFKPAMKMLITEDDRKVRLTEKE TNILKFLYRATEGVVPRDILLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPGNARLLV TESGGYRLVV" gene 2181007..2182095 /locus_tag="RTM1035_10645" CDS 2181007..2182095 /locus_tag="RTM1035_10645" /note="COG0807 GTP cyclohydrolase II" /codon_start=1 /transl_table=11 /product="3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" /protein_id="jcventer:1101493006651_RTM1035_10645" /db_xref="CDD:31150" /translation="MSLAPDLTEIAARARSDLRMGVPVVLSGRGGAALIMAAETLEAQ RLADLRALGGTPVLAITARRATTLKARAYDDDLARVILPPDVSLGWILSVADPADDLK SPMKGPLTSERGGAVDLHRLALSLVKSSRLLPAALVLPLTEGVEFARRHGLTLLDTAA APQLELTSPLHPVVSARLPLAVSEAGRLHIFRPEDGGEEHYAIEIGQPDRAVPVLARL HSACFTGDLMGSLKCDCGPQLRGALAQMGAEGAGVLLYLNQEGRGIGLANKMRAYSLQ DQGFDTVEANHRLGFEDDERDFRIGARILSLMGFSSVRLLTNNPAKIAMMEQNGIKVI ERVPLKLGENTHNHHYLATKAAKSGHML" gene complement(2182109..2183716) /locus_tag="RTM1035_10650" CDS complement(2182109..2183716) /locus_tag="RTM1035_10650" /note="COG4108 Peptide chain release factor RF-3" /codon_start=1 /transl_table=11 /product="peptide chain release factor 3" /protein_id="jcventer:1101493006651_RTM1035_10650" /db_xref="CDD:33865" /translation="MLDTLSNRPDLPAEIARRRTFAIISHPDAGKTTLTEKFLLYGGA IQMAGQVRAKGEARRTRSDFMQMEKDRGISVSASAMSFDFGRFRFNLVDTPGHSDFSE DTYRTLTAVDAAVMVIDGAKGVESQTQKLFEVCRLRDLPILTFCNKMDREARDTFEII DEIQQNLAIDVTPASWPIGMGRDFVGCYDMLNNRLELMDRADRNKVAESIKIDGLDDP KLAQHVPANLIAKLREEIEMARELLPALDPQSVLEGHMTPIWFGSAINSFGVKELMDG IGTYGPEPQVQKATPRAIAPEETAVTGFVFKVQANMDPKHRDRVAFVRLASGHFKRGM KLTHVRSKKPITVSAPVLFLAADRELAEEAWAGDIIGIPNHGQLRIGDTLTEGEALRV TGIPSFAPELLQQARAGDPMKAKHLEKALMQFAEEGAAKVFKPAFGSGFIVGVVGALQ FEVLASRIELEYGLPVRFEGSQFTSARWVSGDKLAVEKFTAANKQHIAHDNDGDIVYL TRLQWDIDRVARDYPDVTLTATKEMMV" gene 2183804..2183938 /locus_tag="RTM1035_10655" CDS 2183804..2183938 /locus_tag="RTM1035_10655" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10655" /translation="MLASGTKRGGKNVSPVHRAAQSAFNLAPNRSATFIDLFLIHFLA " gene 2184209..2185975 /locus_tag="RTM1035_10660" CDS 2184209..2185975 /locus_tag="RTM1035_10660" /codon_start=1 /transl_table=11 /product="type I secretion target repeat protein" /protein_id="jcventer:1101493006651_RTM1035_10660" /translation="MSDTTFTQAHFGGNALALRDRVGDEGTYDDVARTLGVEHIRYPG GSLTEYYFDIRNPDNDIVVNSETGEATSFLPISDALGFAEEEGIAVTIVLPTRHFLST EVDAEGNRLPDIDEPALRSFLQDVFDGRYGAADIQAIEIGNEYWGSGGMNTFEYGRLA SEMAVIVKDEIRSHPDAEHLSETDILVQMGTNYGRFALSNLFSGTGEDQLAELNETYD LNLSENEYIYSSGDVAWAKVANAIILNEFDTVAEQSAIDGVVAHIYSKGADTPNSRYF ELSQIADTWLKEMPGLDIYATEWNLKRSVSEDPQEEFGLKQAHEMLNVLEAFSWGGVD AAHVWPLQMNSRTGLADGEGDADIRVPGEMFRLLNETLPGTRPLGLAGSEGRETELSG ETADVHAFYAPDRLVTFLASTSDQPSEEVVDFMSILRDLGDVTITRLGVAEGENPSES TAEPVVTNENPQDLIEDGILIADLAPYEILMIEMLNPVFTAELARMVADTPEETDEID VEESDNQVVDNVLNFADFFQSGSSGSGSSESLIPTSPPAEEPEDAPDSAAGDADDSGG GGGDFGFGALALAFLPILLLAA" gene 2186063..2187370 /locus_tag="RTM1035_10665" CDS 2186063..2187370 /locus_tag="RTM1035_10665" /EC_number="4.3.2.2" /note="COG0015 Adenylosuccinate lyase" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /protein_id="jcventer:1101493006651_RTM1035_10665" /db_xref="CDD:28775" /translation="MIPRYSRPDMVAIWEPATKFRIWFEIEAHACDAMADLGVIPREN AQAVWKAKDVEFNVARIDEIEAETKHDVIAFLTHLAEHVGSDEARFVHQGMTSSDVLD TCFNIQLTRAADILIADMEGLLAALKRRAFEHKDTLRIGRSHGIHAEPTTMGLTFARF YAEMQRNLRRLHTAREEIATGAISGAVGTFANVDPRVEEHVCAQLGLTPEPISTQVIP RDRHAAFFAALGVVASSIENVAIEIRHMQRTEVLEAAEFFSMGQKGSSAMPHKKNPVL TENLTGLARLVRMAVVPAMENVALWHERDISHSSVERMIGPDATITLDFALARLTNVI DKLLVYPDNMMANMNKFPGLVMSQRVLLALTQAGVSREDAYRLVQRNALKVWETGCDF KTELLNDAEVTAALSPAEIAEKFDLGYHTKHVNTIFARVFGES" gene complement(2187645..2191652) /locus_tag="RTM1035_10670" CDS complement(2187645..2191652) /locus_tag="RTM1035_10670" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10670" /translation="MATILLSAAGAAIGGAVGGTALGLSSVAIGRFAGAVIGRSIDQR LLGQGSEVVETGRVSRLRLTGAGEGDAIPQVYGRMRVGGQVIWATEFRENVTVTQGSR GGGKGNPRPATPDTRAISYSVSLALALCEGEITRVARIWADGTEVAPTSLNMQVYKGA RDQLPDPRIEAVEGAGNVPAYRGTAYVVIEDLDISQFGNRVPQFSFEVCRPSQAETPG AALDPVRSVRGVAMLPGTGEYALATTPVTMNFGLGANGIANINSPSGRSDMATTLEAL VEELPACRATSLIVSWFGDDLRCGVCQIRPRVEQKKFEASNMPWQVASLGRSGAGEVP KDAQGREVYGGTPTDQAVIEAILALQQSGQDVLYYPFILMEQMPGNGLPDPWSGAEDQ PILPWRGRITTSKAPGQVGSPDQTATAEAEVAAFFGTARAADFTVTPIAAQVEESAGT GALDILSFGGALKRSPVAYHGPDEWSYRRFIMHQAALCAAVGGIESFCIGSEMRSLTQ IRGANNSFPAVVQLIALAAEVRALLGPEVKISYAADWSEYFGYQPGNGDRFFHLDPLW ADANINFVGIDNYMPLSDWREGDEHLDARDWPSIYDLDYLQANIEGGEGYDWFYPTSE ARAAQRRVPITDEVFGEPWIWRFKDLRNWWEHRHFERVGGLRASEPTAWVPQSKPIRF TEYGCAAVDKGSNEPNKFLDPKSSESSLPRHSTGQRDELIQMQYLRAMAAYWNDPARN PQSEEYAGRMLDMDHAYVWAWDARPYPYFPGNLELWSDGANYARGHWINGRVSGRRLA DVMVEVAARAGLRDLDTSRTEGFLRGFLVDQVGAARATLQPLMLAYGLDAIERHGVLQ FRARDGRADHVVDLDLVVRDPELGGVIEELRSSDLELAGRVRLRFLEADADYEAISEE AILPDEATHAVAASEMPLALTRSEGRQVVERWLSEARVSVDTLRLTLPPSRLDVGAGD VIALPKGGDGARFRIDRIEQMGNAQRVDAVRIDPESYRPILIEENPARLRPFVAPGPV TPLFLDLPLLTGDEVPHAPHIAVLANPWPGTAAVYSSAEDADYRLNTLIAARSTVGVT QTPLLPAPMGRIDRGDGLFVRMRFGTLESVGDTALLNGSNLCAIGDGTPGGWELFQFR DAELVAPDTYILRHRLRGQLGTERAGGGVWPAGSLVVRLNGVPQQIELTEAQRGQALH YRIGPGGRPVDDPSFAHAILAFDGVGLRPYAPVHLRFTEAQGDLTVTWIRRTRIGGDR WDTPEVPLGEESERYLLRVMRGAQVLREVTLERSDWVYQQAARVADGADAGKRIEVAQ LSASFGAGTFATRDL" gene complement(2191656..2192099) /locus_tag="RTM1035_10675" CDS complement(2191656..2192099) /locus_tag="RTM1035_10675" /note="COG0791 Cell wall-associated hydrolases (invasion-associated proteins)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10675" /db_xref="CDD:31134" /translation="MSGQGARIVATARGWIGTPYRHQAACRGAGCDCLGLVRGLWREM CGAEPERPPAYSMDWSEPARQEVLWQAAARHLLAKDLTEEAAGDVILFRMREGAVAKH LGVVAELGARASFIHAYSGHGVVETALSAPWRRRIVARFAFPEEG" gene complement(2192096..2192971) /locus_tag="RTM1035_10680" CDS complement(2192096..2192971) /locus_tag="RTM1035_10680" /note="COG5449 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10680" /translation="MTDLLEHLGTGVTTTCRAWALTRRDGVVMGFTDHDRLLAFEGIA FRPDTGLSALALQQTTGLSVDNTEALGALNDAAIREADIDAGRYDGAELRAWLVNWQD VAARRLLFRGSIGELRRAGGAFEAELRGLTDALNVPLGRVYQKACSAVLGDRDCRFDL DTPGYVSERPAEEVEESRVFRFAEMGGFAEDWFRHGVIRVLSGAAAGLIGLIKRDRTE GTGRVIELWHPLGAKVMPGDALRIEAGCDKRRGTCQFKFDNLVNFQGFPDIPGDDWTI TDPSKAPRLDGGSRR" gene complement(2192968..2193600) /locus_tag="RTM1035_10685" CDS complement(2192968..2193600) /locus_tag="RTM1035_10685" /note="COG5448 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10685" /translation="MGFHEVRFPANLSFGSLGGPERLTDIVTLANGFEERNTPWAQAR RRYDAGVALRSLDDIEALIAFFEARRGQLFGFRWKDWTDFKSGRAKAAPDYRDQEIGV GDDATVAFPLVKSYRSGDQIVLRPIVKPVTGTVRLGLDNVEMQDGVHYTVDTATGIVT FSEPPNRGVPITAGYEFDVPVRFDTDRIQTSLASFQAGEVPNVPVVEIRV" gene complement(2193614..2194255) /locus_tag="RTM1035_10690" CDS complement(2193614..2194255) /locus_tag="RTM1035_10690" /note="COG5281 Phage-related minor tail protein" /codon_start=1 /transl_table=11 /product="phage-related minor tail protein-like" /protein_id="jcventer:1101493006651_RTM1035_10690" /db_xref="CDD:34878" /translation="MDELEAQIAALDDAMGQTTSMAAAFGAELARVRGGFAGAEQDVQ SLERGLSRGLRGAIRGAVVDGDGLSDSLRRLAAIMVNTAFNDAARPVTDQIGGLISQG IGSLVGGLFPFAKGASFSQGRVQPFANGGVVNGPVMFPMRGGTGLMGEAGPEAIMPLS RGPDGRLGVRAQGGGAVSVVMNIQTPDAEGFRRSQGQIAAQLGRVIGRGGRNR" gene complement(2194248..2194454) /locus_tag="RTM1035_10695" CDS complement(2194248..2194454) /locus_tag="RTM1035_10695" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10695" /translation="MSGRFDWPALMRAGLQGLGLKPAEFWALTPVELRLMLGERQGVT PMARAGLEALLRAFPDGKGEMSDG" gene complement(2194451..2194774) /locus_tag="RTM1035_10700" CDS complement(2194451..2194774) /locus_tag="RTM1035_10700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10700" /translation="MANPWAGEVALVIGGERQVMRLTLGALAELEAGLASGSLVDLVA RFEGGAFSTRDVLALIVAGLRGGGWRGSAADLLSADIEGGPLAAARAAAELLARAFAL PEGAA" gene complement(2194779..2195192) /locus_tag="RTM1035_10705" CDS complement(2194779..2195192) /locus_tag="RTM1035_10705" /note="COG5437 Predicted secreted protein" /codon_start=1 /transl_table=11 /product="Phage major tail protein, TP901-1" /protein_id="jcventer:1101493006651_RTM1035_10705" /db_xref="CDD:34996" /translation="MAVQNGKDLLVKIDLNGSGNFQTVAGLRATRVSFNAESVDVTSL ESAGGWRELLAGAGVKSASISGSGIFRDATSDARARQIFFDGEMPDFQVVIPDFGTIE GPFQVTAIEYGGTHDGEATYELALASAGQLTFTVL" gene complement(2195217..2195630) /locus_tag="RTM1035_10710" CDS complement(2195217..2195630) /locus_tag="RTM1035_10710" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10710" /translation="MSYAMAAGLQAAVYHRLVQDVALSALVGGAIHDALPSGRVPPLY VMLGPEEVRARGDGSAGGAWHRFTVTVVSESGGFQEAKAVAGAVSDALLDADLPLTRG RVSGLNFLRARARRETAGQARRIELTFQARVDDGA" gene complement(2195627..2195965) /locus_tag="RTM1035_10715" CDS complement(2195627..2195965) /locus_tag="RTM1035_10715" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10715" /translation="MARPRLNRPLVLEAAVRLSDGAGGVTEVWEVRGTLWAEVAARTA REAEVGGAAVARAAYRITVRAAPQGAASRPEAGNRLRDGAREFAILSVTEADMGGRYL SLWAQEEVVP" gene complement(2195965..2196564) /locus_tag="RTM1035_10720" CDS complement(2195965..2196564) /locus_tag="RTM1035_10720" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10720" /translation="MMLIEETAVPLAALPLAEFKAHLRLGTGFADDDIQDPVLESFLR ASLAAIEGRTGKVLLEREFSWALHQWRDVTGQALPVAPVRALLSLGLRNRADEVEVID PAHYRLEQDVHRPVLRPVGTFLPVIVRGGVAEVRFRAGFGVGWGDLPADLAQAVLMLA AHYYEYRHDLSLSSGCMPFGVASLIERYRTVRLLGGGAR" gene complement(2196714..2197895) /locus_tag="RTM1035_10725" CDS complement(2196714..2197895) /locus_tag="RTM1035_10725" /note="COG4653 Predicted phage phi-C31 gp36 major capsid-like protein" /codon_start=1 /transl_table=11 /product="major capsid protein, HK97 family" /protein_id="jcventer:1101493006651_RTM1035_10725" /db_xref="CDD:34272" /translation="MMMTQAKARAGEDLSPVAEVKSAVAGFLSEFSGFRAEIHNRLQQ QEEKMTMFERKSIALARPHLAASSDGSAPHRKAFDAYLRGGDDDGLRGLELEGKALNT AIAGEGGYLVDPQTAETIRSVLRSTASIRAVANVVAVEATSFDVLVDHTDVGHGWATE SGTVSESDTPVIDRISIPLHELSALPKASQRLLDDSAFDVEGWLAGRIADKFARAEAA AFVAGDGVDKPRGFLTHPNVDNDVWVWGNLGYVPTGVAGAISGPDPIVDLVYALGAQY RANGTFVMNSKTAGTIRKMKDADGRFLWSDGLAAGEPARLMGYPVLIAEDMPDIATGA NAIAFGDFHAGYTVAERPDLRVLRDPYSAKPHVLFYATKRVGGDVSDFKAIKLLKFAV S" gene complement(2197929..2198486) /locus_tag="RTM1035_10730" CDS complement(2197929..2198486) /locus_tag="RTM1035_10730" /note="COG3740 Phage head maturation protease" /codon_start=1 /transl_table=11 /product="phage prohead protease, HK97 family protein" /protein_id="jcventer:1101493006651_RTM1035_10730" /db_xref="CDD:33535" /translation="MDMDTGLERKFARLDGAVLSVSEAGQIEGYASLFGAPDQGGDIV ERGAYAASLGRLAKEGRRVKMLWQHDPAQPIGIWDEVREDARGLWVKGRLLESVARAR EAAALIAAGAIDGLSIGYRTLRAVKNDKGQRLLTELELWEVSLVTFPMLPSARVTAKG DAPEAQALREMAAAFDAARREMAQV" gene complement(2198510..2198755) /locus_tag="RTM1035_10735" CDS complement(2198510..2198755) /locus_tag="RTM1035_10735" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10735" /translation="MAERGVPPPRYGFEAFDCAPGLRMEAHERVSEFQTRAMTERLER TEAALERLERRLWLAVYGVVAAILAQAFQPLLAVLPG" gene complement(2198748..2199938) /locus_tag="RTM1035_10740" CDS complement(2198748..2199938) /locus_tag="RTM1035_10740" /note="COG4695 Phage-related protein" /codon_start=1 /transl_table=11 /product="portal protein, HK97 family" /protein_id="jcventer:1101493006651_RTM1035_10740" /db_xref="CDD:34311" /translation="MILDFFRQGGGAPDAAPEQKASAAGRVMAWHGAGRVAWSPRDTV SLTRTGFSGNPVGFRCVKMIAEAAAALPLVLQNSEQRFAVHPVLSLIKCPNPAQGRAE LFEALYGQLLLTGNAYIEAVGAGGIPLELHVLRSDRMSVVPGADGWPVAYEYAVAGRK HRFDVREGVPCVCHIKTFHPQDDHYGLSPLQAAAQAVDVHNSASRWSKALLDNAARPS GAIVYKGPEGQGAMSGDQYDRLVSEMEAHHQGARNAGRPMLLEGGLDWKPMGFSPSDM EFQKTKESAAREIALAFGVPPMLLGIPGDATFANYQEANRAFYRLTVLPLAMRVAATV SAWLGRMSGEALDLVPDLDQVPALAAERDAQWARVSGADFLSDGEKRSLLGLPALAAE EVNG" gene complement(2200045..2201145) /locus_tag="RTM1035_10745" CDS complement(2200045..2201145) /locus_tag="RTM1035_10745" /note="COG3300 MHYT domain (predicted integral membrane sensor domain)" /codon_start=1 /transl_table=11 /product="putative integral membrane sensor protein" /protein_id="jcventer:1101493006651_RTM1035_10745" /db_xref="CDD:33109" /translation="MEFLEYSHNLWLVVASLSVSLVAAFTGFSLTRGIAAQPVAMRKL SVTLAAIALGGGIWSMHFVAMLGLQLPIPIYYDAMITLGSALIAILMVGAALLLLHFY PRTRASLTAAGCVIGLGIVAMHYLGMSGLQLCRAVYTLPGVVFAVLAACGLSVAAIWV AYGQRRPRNILLGTLAFGFAVFLVHFAAVFGTRFVAVPTAQEIGPLMGNEVLALGVLV SSFVLCGAFLLTGVTFLAQGAKAEGALPVEAEVKPVQVLQRIPYEHHGQTHFIDARDV AFLRAEGHYTLLYTGANKHFCTWSITEAERRLSPGPFLKVHRSYLVNPAHVSHFERRK DNGLCYFRLGGQDVTTPVSRSRLAELREALGV" gene complement(2201259..2203238) /locus_tag="RTM1035_10750" CDS complement(2201259..2203238) /locus_tag="RTM1035_10750" /note="COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family" /codon_start=1 /transl_table=11 /product="oxidoreductase, FMN-binding/pyridine nucleotide-disulfide oxidoreductase" /protein_id="jcventer:1101493006651_RTM1035_10750" /db_xref="CDD:32086" /translation="MSAFSHVFRPAVLAGHVLRNRVVFGAHTTNMAEDGLPGARHIAY YEERAIGGAAMIVVEPMPVHRTAVLTRGNFRHSSDEVIPAFAKLTQAVKRHGAVVVQQ LYHVGAHGDQDNSWHAAWSPSGGPSWHDSDGSHEMSGAEIEEIIESFVAAALRCQKAG FDGVEVWAAYHCLLDQFWTPMSNTRDDEWGGSLENRTRFSREILRRVRAACGPGFIVG LSVSDGSTVEATLGHEAMAEVVALHDAEGLMDYVTCGSGSYLDYHPLMPTFLYPEKLG VDLAARLKGVVRHALVTAESHIRTPENANTVLGAGEADMVSIVRGQIADPHLVAKAEA GRPEDVRGCISCNQQCWGRRSRDYWISCLINPSVGWEHQWGGDRFRPAEQVHTVLVVG AGPAGLEAARVAAERGHRVCLHEAGPELGGQFRLAGLQPRRAQILDLLGWYARQLERL GVEMHFNSYLDAGEIAAMGVDQVILATGSLPAGTGFQKAIPQVAELPGLDGNVWPVED VMGRAARLGPRVIVLDEGGNWRGGGTAWHLAEAGHQVVIVTPQAVVGRELERSAADVP LRRRLAALGVRFWTESAITGWQNGGAEVVDLLTGARSHVAADSLVLATTNRADVSLRH GLADLGISAALIGDAHAPRLAAQAFHDGRKLALSL" gene complement(2203235..2203945) /locus_tag="RTM1035_10755" CDS complement(2203235..2203945) /locus_tag="RTM1035_10755" /note="COG0345 Pyrroline-5-carboxylate reductase" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase, putative" /protein_id="jcventer:1101493006651_RTM1035_10755" /db_xref="CDD:30693" /translation="MRLGFLGTGTISEAVVRALAPEGHEIAVSERNAGRAARLAGDFT NVTVASNQPVVDASEVVFLGLMAEIAAEVLGTLRFRADQRVVSFMAGMPLEEVAALVA PARAEAVMLPYPGIAQGGSPILALGKVAVIEALFAPANTVYSLRDRAELEAYLCAQAV LSPAVQMVSGAAEWLCGGEAFLRHLVGSSLMSGACQPMLDALNTKGGYNQRLRQHMES AGMRAVLSEGLDRLADKG" gene complement(2203947..2205992) /locus_tag="RTM1035_10760" CDS complement(2203947..2205992) /locus_tag="RTM1035_10760" /note="COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family" /codon_start=1 /transl_table=11 /product="N-methylproline demethylase, putative" /protein_id="jcventer:1101493006651_RTM1035_10760" /db_xref="CDD:32086" /translation="MSRDPLLQPYQLKHLTLKNRIMTTSHEPAYPEEGMPKARYTAYH AERAKAGVALAMTAGSAAVSKDSPPVFNNVLAYKDEVVPYIRQLTDACHEHGCAVMIQ LTHLGRRTGWSKGDWLPSVSSTKHREPAHRAFPKLAEDWDIARIITDFVDATERMKEG GMDGIELQVYGHLLDQFWSPLTNDLDGPYGGQSLETRMKLLLDVLAAIRKRVGTEFIV GLRYTADEAEAGGITPEEGLEISKRLAATGMVDFLNVIRGRIHTDPAMTDVIPVQGMR SAPHLDFAGAVRAATGMPTFHAAKIPDVATARHAIQAGLLDMVGMTRAHMADPHIVRK IIEGREADIRPCVGATFCLDRIYAAGEALCIHNAATGRELTMPHEISPAETRKKVVIV GAGPAGLEAARVAAERGHDVTVFEAQPDPGGQIRLTALNPRRREMISIIDWRMAQCAA RDVVFHFNTVAEAEDVTALNPDVVIVATGGLPNRELFESGKEQELVVTAWDLISGDVK PGQTVLIYDESGDHPGLMAAEVAANAGASVEVMTPDRVFAPDIMAMNLVPYMHSLQDK DVAFTVTRRLLDVTRDGNRLKAKIGTDYSKFTSEKTYDQVVVNYGTLPLDDLYFELKP LSRNLGEVDQDALIAGDAQAVDSNPEGAFQLFRIGDAVSSRNTHAAIYDALRLMKDI" gene complement(2206018..2207541) /locus_tag="RTM1035_10765" CDS complement(2206018..2207541) /locus_tag="RTM1035_10765" /note="COG5598 Trimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase family protein" /protein_id="jcventer:1101493006651_RTM1035_10765" /db_xref="CDD:46144" /translation="MQVRRGTGAGAGVNPLHVPYITRGIPTHDIASEESLEAIIATAD RILAEIGIEFREDPETVRLFQQAGGKAREVGPEAWNVTFEPGLIRGLLATAPAEFTQH ARNPAKSVRIGGKSMVFAPAYGSPFVMDLDKGRRYGTIEDFQNLIKLAQSSPWLHHSG GTICEPTDIPVNKRHLDMVYAHMRYSDRAFLGSITAPERAEDSIEMCRILFGAEYVDS HCVIMGNFNSTSPLVWDGVSTRGIRAYAAAGQGSIHLPFLLGGAVSPLTMPGAIAQCL AESMVGCALTQLVRPGAPAILGSFLSSMSLRTGSPTFGTPEPALGSLVMGQIARRLKM PLRCAGNFSTSKLPDGQAMTQAMMSMMSAVNGGANFILHSAGFLDGLLSMSYEKLMLD MDMCGALHAWLKGLEVNEDTLAFEALAEKGPGEHMFGCAHTLRHYETAYWDSGLDDNT TYETWSEAGGVDAMTRANGAWKAVLATYEAPPLDAGIDGALCDFIAQRKSEMADAWY" gene 2207753..2208400 /locus_tag="RTM1035_10770" CDS 2207753..2208400 /locus_tag="RTM1035_10770" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family protein" /protein_id="jcventer:1101493006651_RTM1035_10770" /db_xref="CDD:31500" /translation="MNRTQTNHRAKPAPDPATRGSEDLWLGAAYEVLVTAGVDAVKVM PLAHMLGLSRTSFYWHFKDREALLSALLDRWEAQNTGNLVARTEAYADSINEALYNLF DCWLTRELFDSRLDFAIRNWALGDPVVKAKLQRTDETRITAIRAMFARFGYAPDHADT RAHTVYYTQIGYISMMVAEPRDIRIARMPAYVENFSGHAPAPAETARFMARHTSA" gene 2208522..2209655 /locus_tag="RTM1035_10775" CDS 2208522..2209655 /locus_tag="RTM1035_10775" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="extracellular ligand-binding receptor" /protein_id="jcventer:1101493006651_RTM1035_10775" /db_xref="CDD:31027" /translation="MTFKTLAIAGALSLAAATAQADIKVGMITTLSGGGAGLGIDVRD GFMLALEQSGRSDIEVIIEDDQQKPDIAVQLSDKMIQSDKVDVMTGIIWSNLAMAVVP GAVAQGKFYLSPNAGPSALAGQGCLPNYFNVAWQNDNLHEAAGAYANDAGYKNSFILA PNYPAGQDALTGYKRFYKGELAGEIYTQLGQTDYAAEIAQIRASGADSVFFFLPGGMG ISFLKQYADSGVGLPVVGPAFSFDQGILQAVGDAALGVVNTSQWSKDIDNATNAAFVA SFQEKYGRLPSLYASQGFDTANLLISALDTAQPSDADAFRAALKAADFASTRGDFAFG NNHHPIQDIYVREVIKEGDVYTNKIIGVALEDHVDAYAAECKM" gene 2209769..2210644 /locus_tag="RTM1035_10780" CDS 2209769..2210644 /locus_tag="RTM1035_10780" /note="COG0007 Uroporphyrinogen-III methylase" /codon_start=1 /transl_table=11 /product="probable uroporphyrin-iii c-methyltransferase protein" /protein_id="jcventer:1101493006651_RTM1035_10780" /db_xref="CDD:30357" /translation="MTDSHHPTLPSLPGTDWPRMEPGWVWLCGAGPGDPGLLTLHALN ALQQADVVIYDALVQDCILDWAPQARHIYAGKRGGKPSAKQRDISLQLVDLAREGLRV LRLKGGDPFVFGRGGEEAQTLVQHGVPIRIIPGISAGIGGLAYAGIPVTHRDVNQSVT FVTGHDQSGHTPSSLNWQAIAQGSQVIVIYMGMKHAGQISAALLDAGRPLDEPCAVVS SATTPDQRVLETTLGQLAADIETSGFEPPAILCIGRSVLMRQVLDWQGMLAGAAPRDL DPLGRGLPAETACGG" gene 2210632..2211897 /locus_tag="RTM1035_10785" CDS 2210632..2211897 /locus_tag="RTM1035_10785" /note="COG1797 Cobyrinic acid a,c-diamide synthase" /codon_start=1 /transl_table=11 /product="cobyrinic acid a,c-diamide synthase" /protein_id="jcventer:1101493006651_RTM1035_10785" /db_xref="CDD:31982" /translation="MRGLILAAPSSGAGKTTLTLALLRFLSREGLPVRGAKSGPDYID PRFHEAACGAPCPNLDAWAMTPDRLRSLAAGQGLLIIEGAMGLFDGAPPDGRGAVADL ARHLSLPVVLVVDAGRMAGSIAPLVAGFAGFDARVRVSGVMLNNVGSDRHEAMLRRAL APLGLPVLAALRRNPALAQPSRHLGLVQASERPDLHQFLDTAADALAMTLDRETLLAL AAPLPDAQAAPRLTPPAQVIAVAQDPAFGFAYPHMLADWQAAGAEIRPFSPLANEPVP QAEFIFLPGGYPELHAGQIAANQIFMQSLKNAAQTSDIYGECGGYMVLGDSLTDASGT RHTMAGLLPLDTSFATRRLHLGYRHLAAHTGPFPGTWAAHEFHYATTLRADGPTLFTA TDAEGTELPPMGLHSGRVSGSFAHLIDRA" gene 2211941..2213158 /locus_tag="RTM1035_10790" CDS 2211941..2213158 /locus_tag="RTM1035_10790" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="transporter, putative" /protein_id="jcventer:1101493006651_RTM1035_10790" /translation="MTDIALHPDDSRAKRNVAVLVAAQAILGAQMPMIFVVGGLAGQS LASNICFATLPISLIVLGSMLSATPISHLMQRYGRRTGFFIGAGAGALGGAIGAYGLY TASFPIFLLGSLITGTYMSAQGFYRFAAADTASDAFRAKAISYVMAGGLLSAVIGPQL VKATSQAMVIPFLGTYLAVIALNIAGAFLFLLLDIPKPPQPAVDAPHGRTRMELLKTP RIAVAVICATVSYALMNLVMTSTPLAVVGCGFDAGNAADVVTAHVLAMYIPSFFTGHL IARFGVEKIVAIGLVILAGAGAVALNGVHLENFFVALILLGIGWNFGFIGATTMLAGA HEPQERGRMQGLNDLIVFGGVTFASLSSGGLMNCSGGTPEAGWTAVNLAMAPFLMLAG GALIWLTLRPKEA" gene 2213171..2213557 /locus_tag="RTM1035_10795" CDS 2213171..2213557 /locus_tag="RTM1035_10795" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10795" /translation="MIRQIWQSYRRLPLWVQLWVALILVPVNAASLFFISHPAGAWLA TMAVGAMLCNGVLMLIERGFSKVMALPHILIWTPMLGLILWLLTQDITPTYHNYLVIL LAVDVFSLILDVIDSRKWLSGDRKIA" gene complement(2213570..2214442) /locus_tag="RTM1035_10800" CDS complement(2213570..2214442) /locus_tag="RTM1035_10800" /note="COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydrogenase domain protein" /protein_id="jcventer:1101493006651_RTM1035_10800" /db_xref="CDD:32267" /translation="MAKLAFLGLGVMGYPMAGHLAAAGHEVCVYNRTAAKAEAWAKEH GGRHAATPREAAEGADFVMACVGNDDDLRSVCLGADGAFAGMAAGAIFVDHTTVSSKV TAELYAEAKAAGLNFVDAPVSGGQAGAEKGQLSIMCGGDEAAYAAAEPVMQVYAKLCR RIGESGAGQMTKMCNQIAIAGLVQGLAEALHFAEKAGLDGRAVVEVISQGAAGSWQMS NRYETMIDDKWNHGFAVDWMRKDLGICLSTADETGASLPVTALVDQFYKDVQKMGGGR WDTSSLFARLRKLG" gene 2214541..2217018 /locus_tag="RTM1035_10805" CDS 2214541..2217018 /locus_tag="RTM1035_10805" /note="COG2366 Protein related to penicillin acylase" /codon_start=1 /transl_table=11 /product="penicillin amidase family protein" /protein_id="jcventer:1101493006651_RTM1035_10805" /db_xref="CDD:41830" /translation="MSGLVKWLLRLAGGAILLAVLALLGAYFLLSRSLPDYDKTLSVP GITAPVEIVRDNANVPHILGQTDADSFFGLGYAHAQDRLWQMMTMRRTVQGRLSEVFG TRTVKIDSTMRRFDLYTLARQSVTVQDAETLAALKAYSDGVNARLNEINREALGRGAP EQFIFNAPIAPWQPADSIALIKLMAVQLSSHLENEVLFARAALALENPNRLADIMPLA PGSGIAALPEYAALFPGANWSRIAQTSPERGDPLSPFKRRAFAGASNAFAAAPSRSAS GGTLLANDPHLGFSAPNIWYLARLNLTSGGVIGGTIPGIPAILTGRSARLGWAVTSSY LDDQDLYIEELNPDDPNQYRTPDGWKPFRTTRSIVEIKDADPVTLTLRWTENGPVLPG SHYNLAEVTPAGHVAALNWTALSPEDTTMSSAIGLMRAQSVQDAIDLSRLYIAPSQNL TLVDQSTIAMRTIGAMPRRDARHESEGRMPARGWLPENRWQGTLPFAANPEFVAPSGG ILGNTNNKVVDRPFPMHVSHLWGDTQRVHRWRRLMQGREVHTRESFIEAQLDTVSFTA RSLLPLIGADLWFTGESAPEGTPERLRQRALTMLADWNGEMNEHLPEPLLYAAWMRAL MDRLIRDDLGPLSREFDHPDPIFIERVFRNVDGAADWCDVKQSAAIETCTDTARMALD DALIWISERYGQSLESLRWGDAHQATHDHQVLGDVPLLRHFVNIRQSTSGGDNTLLRG RTRGGNGPDPFHNVHGAGYRGVYDFADPDSSVFIIATGQSGHFLSRYYDNLSQLWRRG EYIPMSLDPDLARAASVGITTLLPTDQ" gene 2217115..2217723 /locus_tag="RTM1035_10810" CDS 2217115..2217723 /locus_tag="RTM1035_10810" /EC_number="6.3.5.3" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase subunit II" /protein_id="jcventer:1101493006651_RTM1035_10810" /translation="MISQARIWRVDANRRMDPAETEDDMMFRKLALATALTSVAALAA HAADEGGTERQAQDNSGVDAIYEESQGTVESAASGNWSAATVADNGELHAPTDLDLAA KDQRKASDTLVENILAEAETGATLSSVDDKVIGEVVSHAGDESAEHYIYVDVHADAEI PAERIGFQAGTLSVAENGGLEYAMTLEQLRTAVAEKVATMTQ" gene 2217876..2220068 /locus_tag="RTM1035_10815" CDS 2217876..2220068 /locus_tag="RTM1035_10815" /note="COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase subunit II" /protein_id="jcventer:1101493006651_RTM1035_10815" /db_xref="CDD:30395" /translation="MHIPEGARPMQEPSITPDLVAAHGLKPEEYDRILEIIGREPTFT ELGIFSAMWNEHCSYKSSKKWLRTLPTTGPQVICGPGENAGVVDIGDGQAVVFKMESH NHPSYIEPYQGAATGVGGILRDVFTMGARPIASMNSLSFGMPSHPKTRQLVHGVVAGV GGYGNCFGVPCAGGEVRFDPAYNGNCLVNAFAAGLADADKIFYSAASGVGMPVVYLGA KTGRDGVGGATMASAEFDDSIEEKRPTVQVGDPFTEKRLMEACLELMATGAVISIQDM GAAGLTCSAVEMGDKGGLGVKLHLDAVPQREANMTAYEMMLSESQERMLMVLRPELEA EARAVFEKWDLDFAIVGETIAEDRFLILHGNEIKADLPLATLSGSAPEYDRPWVKTTP AAPLDPATVPGVDPIDGLKALIGSINYCARQWVYEQYDTMVMADTARTPGQGAGLIRV HGTDKLLAFTSDVTPRYVKANPVEGGKQAVAEAYRNLSALGAVPLATTDNLNFGNPEK PEIMGQFVGAIKGIGEAVAALDMPIVSGNVSLYNETDGTAILPTPTIGAVGIIRDPET AITGQVRDGHVALLLGETHGHLGQSALLAEVFHRVEGDAPPVDLAAEKRHGDFIRANH ALIKACTDLSDGGLALAAFELAEAAGVGVHLDSDDTATLFAEDQARYLIACNFDQAEA LMIAAGRAGVPLTAVGRFTGDTVRLGKSEAALSELSDIFRGTFGATFG" gene complement(2220065..2220136) /locus_tag="RTM1035_10820" CDS complement(2220065..2220136) /locus_tag="RTM1035_10820" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10820" /translation="MRTKVLGHDGISPIMAIAPPLAP" gene 2220262..2220498 /locus_tag="RTM1035_10825" CDS 2220262..2220498 /locus_tag="RTM1035_10825" /note="COG0271 Stress-induced morphogen (activity unknown)" /codon_start=1 /transl_table=11 /product="BolA-like protein" /protein_id="jcventer:1101493006651_RTM1035_10825" /db_xref="CDD:30620" /translation="MAMLASDLEALIRQALPNAKITVEGDDGVHFAAEVIDESFRGMN RVQQQRAVYAALKGKMDGPNGAVHALALTTKAPA" gene 2220503..2220733 /locus_tag="RTM1035_10830" CDS 2220503..2220733 /locus_tag="RTM1035_10830" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10830" /translation="MEPRLLVALLLLPFAGIFAYTMWHEILRYRRDGRAAYGLGYCEE TDSTHVTLLGDTETSYDPEETDSTGQGHLRDR" gene 2220742..2221104 /locus_tag="RTM1035_10835" CDS 2220742..2221104 /locus_tag="RTM1035_10835" /note="COG0278 Glutaredoxin-related protein" /codon_start=1 /transl_table=11 /product="Glutaredoxin-related protein" /protein_id="jcventer:1101493006651_RTM1035_10835" /db_xref="CDD:30626" /translation="MTDAKTRIEETVKSADVVLYMKGTKDMPQCGFSSRVAGVLNYMG VDFKDVNVLDDADIRQGIKDYSDWPTIPQLYVKGEFVGGCDIITEMTLSGELDDLFEK SGVSYDKDAAEKIREANA" gene complement(2221143..2222108) /locus_tag="RTM1035_10840" CDS complement(2221143..2222108) /locus_tag="RTM1035_10840" /note="COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family" /codon_start=1 /transl_table=11 /product="agmatinase, putative" /protein_id="jcventer:1101493006651_RTM1035_10840" /db_xref="CDD:30360" /translation="MALEDAKKQVDQAFTRAELRGASYENTFGGALSFARRRYSKDLS GVDVAITGVPFDQSVTNRTGTRMGPRAVREASALQVYDPPYGWDGYDPLSHLSIVDYG DLAFDYAHVAAFPKALHEHAKGILEAGAACFAIGGDHYITLPLLQAHAEKYGPLAVVH FDAHSDTWADDDLTRIDHGTMMYKAVKQGFVDVARSVQVGIRTTNPDTMGLTTLDARQ VHLEGPVEIARKIKEIVGDAQVYMTFDIDALDPAYAPGTGTPVWGGLTSGQAAIILRD LAGINLVGGDMVEVSPPYDTTGATAIAGAHVLMEMLCLWGWTRRD" gene complement(2222118..2223281) /locus_tag="RTM1035_10845" CDS complement(2222118..2223281) /locus_tag="RTM1035_10845" /note="COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase" /codon_start=1 /transl_table=11 /product="amidohydrolase family protein" /protein_id="jcventer:1101493006651_RTM1035_10845" /db_xref="CDD:31662" /translation="MAVINRIAGFSEEMTAWRRHLHAHPELGFDCHETAGFVVERLRE FGITQIETGVATSGVVAVIDGRGDGPTIGLRADMDALPMTEITGLEYASQTPGKMHAC GHDGHTTMLLGAAKYLAETRNFAGRVVLLFQPAEEGPGGGRIMVEEGALSRYGVEQVY ALHTLPGAPAGTFETTPGPIMAAVDTLHIDVIGRGGHGAMPHECLDPVVAAVAIVQAI QTIVSRNRNPLDDLVISVTQIHTGTVDNVIPETAYINATIRTFTPEVQEMVHRRLREV ALGTAAAHGVRAEVRIELGYPATYNDADKTAFAAEVAREVVGADAVIADRPREMGAED FSYMLQERPGSYLFLGQGEGPGLHHPGFNFNDAVAPVGASFFARLVERAQPVS" gene 2223344..2224159 /gene="mazG" /locus_tag="RTM1035_10850" CDS 2223344..2224159 /gene="mazG" /locus_tag="RTM1035_10850" /EC_number="3.6.1.19" /note="COG1694 Predicted pyrophosphatase" /codon_start=1 /transl_table=11 /product="nucleoside triphosphate pyrophosphohydrolase" /protein_id="jcventer:1101493006651_RTM1035_10850" /db_xref="CDD:33737" /translation="MPDDMLIHDPDGGLPRLIAIMARLRDPDTGCPWDIEQDFASIAP YTIEEAYEVADAIEQQNWQELRGELGDLLLQVVFHSQIAQDQGLFDVQDVANAISDKM VARHPHVFGTESRDKTAEQQTRDWEVVKAAERAAEAKTGTLDGVALGLPALLRAVKLQ KRAAGVGFDWPDSSHVLNKIREEVEELHEAATELTQDAVEEEFGDLLFVMANLARHMK VCPETALRRANAKFTRRFERIEALLAERGKRPIESDLAEMDTLWDQAKAEERQ" gene 2224234..2224614 /locus_tag="RTM1035_10855" CDS 2224234..2224614 /locus_tag="RTM1035_10855" /note="COG3651 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10855" /db_xref="CDD:33449" /translation="MSIMDEARNVLGEALEPCSTKPLTGFFRDGHCNTCAEDHGSHTV CAQMTAEFLAFSKYVGNDLSTPHPEFQFPGLKPGDHWCLCAARFLQAHDEGCAPLVRL DATHVRALEIVPLEVLQQHAAPER" gene 2224618..2225013 /locus_tag="RTM1035_10860" CDS 2224618..2225013 /locus_tag="RTM1035_10860" /note="COG2128 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein" /protein_id="jcventer:1101493006651_RTM1035_10860" /db_xref="CDD:42593" /translation="MATVTLISDAEATPEVRAVFDDIRATRGSDFINNFWRALAHDPA LLSATWQRLKSVMGPGTLDPLTKELIYIAVSVANGCEYCAHSHTAAARAKGMTPAQHG ELLSVIGMASQTNALATALQVPVDEVFKV" gene complement(2225025..2226248) /locus_tag="RTM1035_10865" CDS complement(2225025..2226248) /locus_tag="RTM1035_10865" /EC_number="4.2.1.20" /note="COG0133 Tryptophan synthase beta chain" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit beta" /protein_id="jcventer:1101493006651_RTM1035_10865" /db_xref="CDD:30482" /translation="MNDLFNSFMTGPDEKGRFGDFGGRFVSETLMPLILELEEQYEHA KTDPSFWDEMHDLWTHYVGRPSPLYYADRLTQHFGGAKIYLKRDELNHTGAHKINNVL GQIILARRMGKKRIIAETGAGQHGVATATVCAKFGLQCVVYMGAHDVERQAPNVFRMR LLGAEVVPVTSGRGTLKDAMNDALRDWVTNVRDTFYCIGTVAGPHPYPAMVRDFQSII GKETKEQMQAAEGRLPDTLVAAIGGGSNAMGLFYPFLDDPTVNIIGVEAGGHGVDDRM EHCASLTGGRPGVLHGNRTYLLQDADGQILEGHSISAGLDYPGIGPEHSWLHETGRAK YVSITDVEALEAFQLCCAQEGIIPALEPSHALAHVMKIAPTLPKDHLLVMNMCGRGDK DIFTVAKHLGFDMKI" gene complement(2226329..2226958) /locus_tag="RTM1035_10870" CDS complement(2226329..2226958) /locus_tag="RTM1035_10870" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10870" /db_xref="CDD:32408" /translation="MTRDPEDLSDVYGAKTPEQSRAIYNDWALSYDADNLARGFRLPS LGAAMFARFIGTAEGPVLDAACGTGLVGESLRILGYGPITGCDLSPGMLAAAQATGHY ADLVEAEMGSGLPFADDRFAGFICVGAFGPGHAPAESLIHLARVTRPGGIGVFNLLEA TWKAQGFQSVLESLVDSGQIHIAQRSEPFLPFLLAEPDLWSRLYVIRRL" gene complement(2227023..2227481) /locus_tag="RTM1035_10875" CDS complement(2227023..2227481) /locus_tag="RTM1035_10875" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="Putative aromatic pathway regulator" /protein_id="jcventer:1101493006651_RTM1035_10875" /db_xref="CDD:40669" /translation="MPKVLEFREARRDEVAQVVALLRDDVLGQGRELGDMAEYLTAFD AMQVEGNNHLIVGVDAQGAVLATYQITMISGLSLLAVRRAQVESVRIARHLRGQGLGH LMFADVEARARAAGCRLIQLTMNATRTESRRFYESLGYRASHVGFKRALD" gene complement(2227465..2228112) /locus_tag="RTM1035_10880" CDS complement(2227465..2228112) /locus_tag="RTM1035_10880" /EC_number="5.3.1.24" /note="COG0135 Phosphoribosylanthranilate isomerase" /codon_start=1 /transl_table=11 /product="N-(5'-phosphoribosyl)anthranilate isomerase" /protein_id="jcventer:1101493006651_RTM1035_10880" /db_xref="CDD:30484" /translation="MARDIRVKICGLTAAADVSAAVEAGAAYVGFVFFEKSPRNVGLM QARALALGVPPGVAKVALTVDADDATLDALTDQVPLDFLQLHGEESPARVSQIKARYG LPVIKAIGIAEAADLAQIDAYSGVADQLLIDAKPPPGATRPGGNALAFDWGLIAERDW ALPWLLAGGLNPDNVALAVARTGARQLDVSSGVEAAPGIKDAGLIRAFIRNAQGA" gene complement(2228122..2228472) /locus_tag="RTM1035_10885" CDS complement(2228122..2228472) /locus_tag="RTM1035_10885" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="jcventer:1101493006651_RTM1035_10885" /translation="MRYIRYASIAIFALALVLIALANRGVVTLRVLPDELAGFAALNP TYDLPLFIVIFGGILMGLIVGFIWEWIREAGERAAAARQARELASLRAEIKRLKGERH QGKDEVLALLDPAS" gene complement(2228476..2228757) /gene="ihfB" /locus_tag="RTM1035_10890" CDS complement(2228476..2228757) /gene="ihfB"