LOCUS 1099451320118 3067252 bp DNA linear CON 31-OCT-2005 DEFINITION Loktanella vestfoldensis SKA53. ACCESSION VERSION KEYWORDS . SOURCE Loktanella vestfoldensis SKA53 ORGANISM Loktanella vestfoldensis SKA53 Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella. REFERENCE 1 (bases 1 to 3067252) AUTHORS Hagstrom,A., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C. TITLE Direct Submission JOURNAL Submitted (28-APR-2005) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..3067252 /organism="Loktanella vestfoldensis SKA53" /mol_type="genomic DNA" /strain="SKA53" /db_xref="taxon:314232" gene 356..429 /locus_tag="SKA53_t00542" tRNA 356..429 /locus_tag="SKA53_t00542" /product="tRNA-Met" gene 549..719 /locus_tag="SKA53_00005" CDS 549..719 /locus_tag="SKA53_00005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQRTLSFEITTEHVVFNTLASADLVIWISICLKALVYATTDGSG KRFDPAYATQPA" gene 896..1345 /locus_tag="SKA53_00010" CDS 896..1345 /locus_tag="SKA53_00010" /note="COG3019 Predicted metal-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12361" /translation="MKRRDFLITASSAAVLALPVRAAVAKMQVLKSPTCGCCSAWVAH IEDAGLVVETQDVSQEVLWAAKDKAGITPELSSCHTGFIDGYVIEGHVPAADIQRLLT ERPDAIGLTVPGMPIGSPGMEMDNRRDAFDTLLVLRDGSIVVFSSHT" gene complement(1391..1588) /locus_tag="SKA53_00015" CDS complement(1391..1588) /locus_tag="SKA53_00015" /note="COG2608 Copper chaperone" /codon_start=1 /transl_table=11 /product="Heavy metal transport/detoxification protein" /db_xref="CDD:12125" /translation="MNTFHIPDMSCGHCKTIVEKAIKGLDPEAQINFDMETRRIALGS VVDTAIVQAALAEAGYPATPI" gene complement(1610..3943) /locus_tag="SKA53_00020" CDS complement(1610..3943) /locus_tag="SKA53_00020" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="cation transporting P-type ATPase" /db_xref="CDD:11924" /translation="MDHDHPHAAPEMQAGAETAKDPVCGMTVAVKPDGRHAEFEGETF HFCSEKCQTKFKADPWHYASGRAAGVKKTAPAHAQYTCPMHPEIIRDAPGACPLCGMA LEPMLPSDEPSEELTDFTRRMWISAAAAVPLIVLTMGGLVGLPVRDWIGHQTASYLEF VLATPIVLWAAWPFFKRGWDSVVNRSPNMWTLISLGVSAAYLYSIFATFLPGLFPDQY RMGAGVGTYFEASVVIVALVFVGQVLELRARERTGDAIRALLDLAPKTARRILPDGTE YDAPLENIMEGDRLRVRPGDAVPVDATVIEGRSSLDESMLTGEAMPVEKGPGDAVTGA TINKNGALVIEAGKVGADTVLAQIVTMVSNARRSRAPIQGLADRVSAVFVPTVVGTAI FAFVVWMIFGPDPALVFAIASAVSVVIIACPCALGLATPISITTAAGRGAQAGVLIKD AEALERMASVDTLIVDKTGTLTMGKPTLTDKVTLGDVTKAELLSLAAALERGSEHPLA EAIVEGAEAAGAARQEATEFEAVTGKGVRGQIDGHAVTLGNTAMMQEIGLDTGAAEEK ADALRAEGKTAMFVAVDGALAGIVAVADPIKDSTAQAIKALHAQGLRVIMATGDNERT AKAVAERLGIDEVRAGVLPEDKKKLIDQLRKDGHKIAMAGDGVNDAPALAAADVGIAM GTGADVAMESAGITLLGGDLMGIVRARKLARATLRNIKQNLFFAFAYNSLGIPIAAGL LYPVTGLLLSPMIAAAAMSLSSVSVISNALRLRRVDL" gene complement(4598..5332) /locus_tag="SKA53_00025" CDS complement(4598..5332) /locus_tag="SKA53_00025" /note="COG3971 2-keto-4-pentenoate hydratase" /codon_start=1 /transl_table=11 /product="2-keto-4-pentenoate hydratase-like" /db_xref="CDD:13277" /translation="MKHLDAFADALIEAHQSGNRCAPDGPAPKTNAEAYYIQARVSAA LGPIAGFKAALKPGQEPIMSPIVPGFVFASGATVAIGDVMGVELEVGWKIVAPLPDQS ADDFEAKLCRSVRPVPVIELVNSRLRAPLAEDPIAKLADFQINHGLIIGATMGDWDGR DIGNIKARMQAGDNIMLDGPADVPGGSAFSTLKMLLAKIGTHCGGLQVGQIVITGSLH PLTYIDVPCEVHGQIDGLGAISVRLN" gene complement(5329..5949) /locus_tag="SKA53_00030" CDS complement(5329..5949) /locus_tag="SKA53_00030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13408" /translation="MNPNSNRATTREMAAIASTILPDVQGWTAPDGPGLLTSMTLLDA AAAHVAAAEIPDAVGGIIVCAFGDPGRAALAARLDIPVIGIGESAAIAAASGGRRYAV VTHTPGLVSGIDMLMRTAAPSGAYLGTFLTDGDPVILSADEDALDAALLAATHRAHSA GAQAVIIGGGPLGQSAERLRPLAPCDLIAPIPEAARRMLRIMEEWQ" gene complement(5979..6443) /locus_tag="SKA53_00035" CDS complement(5979..6443) /locus_tag="SKA53_00035" /note="COG0251 Putative translation initiation inhibitor, yjgF family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:28356" /translation="MSCPIEAQLGKLGLALPPSAPSRALFLPGKITGNLLFLSGQICE WEGVPKYFGPIGTGFDTAIGQQAAQMCALNLLFSIRAVAGSLTKVSQIVRVGGFVAAD PGYPDGPQIVNGASQLFIDLWGDAGRHARTAVNVASLPANALVEVEAVVELN" gene complement(6440..7618) /locus_tag="SKA53_00040" CDS complement(6440..7618) /locus_tag="SKA53_00040" /EC_number="3.5.1.4" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="amidase" /db_xref="CDD:15348" /translation="MLIDKDPFNCFMPYEAIRVAHAADGPLAGLTLAVKDIFDVAGYR TGSGCPTRLAQSPVARKTASAAQRLLDAGAQFVGKTHTDELAWSMYGMNAHFGTPVNP AAPDRIPGGSSSGSAVAVAGGLADIAIGSDTGGSVRAPASFCGIWGLRPTHGRVCLDG VQPLAPSYDAVGLFARDGATLARAADALLGPDTAALPPNPVLLRPTDMIAQLAAEQQA IYVSVFGALQAQDVEVFPQGVAAVYDIFLTTISGDAKAAIVPWIKASGMPLVRGIHGR VAAAEQLAEAQIADARKARANYAAKIVALLGDTGVLLAPVVPEAPFRLDAPIEVFDTY RHDAMRLLCVAGLVGLPQVTFPAGSIDGAPFGLSLIGPRGSDLSLIALANALAKGTTT " gene complement(7622..8602) /locus_tag="SKA53_00045" CDS complement(7622..8602) /locus_tag="SKA53_00045" /note="COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /codon_start=1 /transl_table=11 /product="putative oligopeptide ABC transporter, ATP-binding component" /db_xref="CDD:10318" /translation="MTENLVDIRNLNVRFSGARTVHAINDLTLTLKQGETMALLGESG SGKSVTLKTLLRLLPPKRSHIDGNIVVNGVDVLTLSGKKLQAYRGEEVSMVFQEPGLA LDPVYTVGDQIAESVMRHKGVRKDEALSTALDMLRRVRIPSPERRLHNYPHELSGGML QRVMIALALACRPRLLLADEPTTALDATVQIQILLLLRDLQKEFGMGVIFVTHDIGVA VEVSERIAVMYAGQIVEEGTTREIIKDPRHPYTRGLLAANLHDAARGARLNAIPGAPP PLDTRPDACSFAPRCPLAEPQCLAALPPVHSPNDRRRVACIHPNAPILAE" gene complement(8599..9651) /locus_tag="SKA53_00050" CDS complement(8599..9651) /locus_tag="SKA53_00050" /note="COG4608 ABC-type oligopeptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /db_xref="CDD:13764" /translation="MSKTETLADTQPDKGGPAQPLLIVRNLQKYFPVRGGIFGGKKAV VQAVDGVSFEVKKGETLGIVGESGCGKSTTARLLIGLLDKDKGEIIYDGQDLGGTLSL RELRRGVQMVFQDSYASLNPRLTIEASIAFGARIQGLSDPVGRARKLMERVGLAPDRF AQRYPHEVSGGQRQRINIARALAMSPRLVVLDEAVSALDKSVEAQVLNLLADLRREFG LTYIFISHDLNVVRYISDRILVMYLGEVVEIAPVDDIWTSQAHPYTRSLFSAMPSMDP DNRTKEPPLAGDPPNPINPPSGCRFHTRCRFSEDVCKAKVPLLHPLTAGSDHLAACHL HDISSGHSKAGKDVFE" gene complement(9638..10525) /locus_tag="SKA53_00055" CDS complement(9638..10525) /locus_tag="SKA53_00055" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10891" /translation="MALIETHGLEDPISEAGKGYWSGVGSRLIRDPVTMICLGVILLL ILSAVFAPYLGLADPYTGSMIKRLAPIGTEGHILGTDEQGRDMLARLIYGGRLTLFIG LMPVVLAFFIGGALGIVAGYLGGWVNTVIMRTVDVFFAFPSVLLAIAISGALGAGILN SLVSLTIVFIPPITRVAEAVTSGVRSLDYIDAARASGANALTVIRVHVIGNVLSPIFV YATSLTSVCMILAAGLSFLGIGVRPPEPEWGLMLNTLRSAIYINPWLSALPGLMIFIT SLCLNLLSDGVRSAMNVKD" gene complement(10530..11528) /locus_tag="SKA53_00060" CDS complement(10530..11528) /locus_tag="SKA53_00060" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10471" /translation="MHVMARDLIYLRTATVFTYFLRRVILMLPVAFGVSVICFMLVQI APGDPLTAIMPVDATADEQAAMRAIYGLDKPLPVQYAIWIGNLFQGDMGKSIATGRPV ADEVFGAVQNSLLLAFSAAVIAFPIGIFLGFLAGYFRDTLLDRAVTAISIAGVSVPNY WLGIVLVIIFSVNLGWLPSMGAGPGGSQDWAWDWLHMRHLVLPAVTLAVVPIGIVART VRALAGDLLTQDFVTALYAKGMSRGDVLRHVARNAAATALSVMGLQLGYLLGGSILIE TVFNWPGSGFLLSNAIFQRDLPLLQGTILVLALFFVAMNLIVDVAQAAIDPRIKRS" gene complement(11547..13145) /locus_tag="SKA53_00065" CDS complement(11547..13145) /locus_tag="SKA53_00065" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /db_xref="CDD:10615" /translation="MKHFKKGVATLLVAASLCAQGAWAQGTLRVGMTAADIPLTTGQT DQGGEGMRFMGYTVYDSLIEWDLTSADKPSALIPGLATAWSVDDADKTKWTFTLREGV TYHDGSPFTAADVVWNFDKLLDETSEQYDSRQAAQGKSRIPAVASYTAIDDYTLEIIT KTPDATLPYQLAWILISSPAQFEAVGKDWEAFAASPSGTGPWKLETFVPRERAELVPN TAYWDETRIPKLDKMVLIPLPEPNARAAALLSGQVDWIEAPAPDTIPAMTGNGFVISS NAYPHNWTWHLSRTEGSPWNDIRVRQAANLAVDREGMSALLGGLMIPAKGFLPPSSQW FGTPTFDVRYDPEAAKALLAEAGYSLENPLKVKALISPSGSGQMLPLPMNEYLQQNLA QVGIDVEFVVVEWNQMINLWRAGAEDPSVEGAMSINFTYFIQDPFTGLIRHLSCDLIA PNGTNWGHYCDPEMQGLFDQIKNTFDAEEQDAVMRATHEKYVNDALFLMVTHDVAPRA LAPNVKGFVQAQNWYQNFSSITME" gene complement(13424..14356) /locus_tag="SKA53_00070" CDS complement(13424..14356) /locus_tag="SKA53_00070" /note="COG0388 Predicted amidohydrolase" /codon_start=1 /transl_table=11 /product="N-carbamyl-D-amino acid amidohydrolase" /db_xref="CDD:10262" /translation="MSRVVRTAAAQMGPISRDETRASAAERMVALLDQAARQGANLVV FPELALTSFFPRWFMPDQADVDAFFETEMPNAATETLFARARALGIAFSFGYAEMCQH DGKLHRYNTAILVDGAGQIVDRYRKVHLPGHPEHEPWRPFQHLEKRYFDPSPFGFHAV DTLGGKIGQAICNDRRWPETYRELALAGAEMVLIGYNTPRHYPPAPKHDHLQDFHNHL SLQAGAYANGMWVIGVAKAGIEEGCDLIGGSAIVAPTGEIVVQAQTLGDEIIVADCDL DRCAEIRANIFDFAKHRRPEAYTRIAAKDAPAKG" gene complement(14449..15804) /locus_tag="SKA53_00075" CDS complement(14449..15804) /locus_tag="SKA53_00075" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="putative glutamyl-tRNA(Gln) amidotransferase subunit (EC 6.3.5.-)" /db_xref="CDD:15348" /translation="MSIWQTDVTALLAAYATGQVTPVQAVEAMLARIAMLNSTLNAYT AMNDLGLSEAVAATARWRAGAPNGPLDGVPLIIKDNLVTAGMPAAWGNAHLARQIATH DEAPIARLRAAGAIFLGKGNTPEFAIEGYTDNLTFGVTRNPFDPALTPGGSSGGVVAA VAAGLAFAGIGTDGGGSIRRPAGYTGLFGLKPGIGHVPRAGGLAQVLLDFEVVGPIAR SARDLTLLDTVLSGGPNKAPSERPLSILAIATLGDAPCDPTIRAAFTATCDRMSALGH AVVKGSMPLDIGQLNAVWTDIGAIGLAAYLEDHPEVRVSANPKYIAIAKTGAKKSGAD LYRILDLVFKLRHETAELFQQYDAILMPTAAANPWPAAEPFPDTIDGQSVGPRGHAIY TGWINAAGLPAVAFPAPTAGLPIGMQLIGPMGSESSIVAVAGACAAAFAWPAIAKDPN D" gene complement(15801..17102) /locus_tag="SKA53_00080" CDS complement(15801..17102) /locus_tag="SKA53_00080" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="putative membrane protein" /db_xref="CDD:11306" /translation="MTIADIAIGFSVMMGLLLIGFPVAIVMVAMGVVGGVLLYGPVLL ESMGPVLWGVQNENVLTAIPLFILLGELLLRSGIADRMYGTLAMWLGGLPGGLLHTNI GCCALFAATSGSSVATAATVGTVALPSLNERNYSSSRALGSLAAGGTLGILIPPSVNL LVYGSLANVSVGQLFIAGIIPGILLTLSFMILIALQHYWKPDDVSKPLQVSRAERIHA LRHLIPPAVVFAIIMGSIYMGIATPTESAALAVIAALVFVWREGRLSLSFLDVCFRQT AKTTGMILLIIAAAFTLNVTLALGGITNAMSSWVGGLGLTSTALLFALMLFYLILGMF MDVLSMQVLTIPVVVPIIIAAGIDPIWFGIFVVLMSELGMITPPVGMNLYVVQGVRSD KGPFMDVIVGALPYAAIMLLFATMLIFLPSIVMWLPSSLAR" gene complement(17099..17668) /locus_tag="SKA53_00085" CDS complement(17099..17668) /locus_tag="SKA53_00085" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13808" /translation="MEFIATWISRLFGWSLLFLSCFVALETVMRKVFNTSLQGADELG GYILAFGSSLAFVVTLAERAHIRIDVLHRKFPIFVQSLIDWLAALSMAVLGCFLLYVG WFVLKDTLAYGSTAATPWATPLIWPQTAWYGALAIFSISAIALSARATWLFFAGDHRT LAAEFNPKGAADELVDELQELAKRKGKLQ" gene complement(17727..18758) /locus_tag="SKA53_00090" CDS complement(17727..18758) /locus_tag="SKA53_00090" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding protein" /db_xref="CDD:11350" /translation="MKTTHIISTIALLSLAVPASAETTMRVMGQPAATGLIQNNVEGP FFADFAASTGLDITAEFQPADITGIKDTEQLRVLKSGLFDIISLRLSQVSRDEPTILG LDLVGLNPDYASGRETVAAFQSVVDARLQEQFNTKLLGVWPFGPQVLFCEPEISSLAD LSGLKVRVYDQNLANFISLVGGTPVPLSFGDVQQSLARGVVDCAITGPSSANSAGWPE VTSYMMPIAFQMAMNGYGMNLDTWNALSAEDQEKMQAAFDTLIEDIWTYSEELFVDAV QCNVGQQPCETGTLYDLTLVEVSDADKALISTAVTDVSFPAWKEICDATNPACSSSWL ETVGVAKGY" gene complement(18755..19537) /locus_tag="SKA53_00095" CDS complement(18755..19537) /locus_tag="SKA53_00095" /note="COG3473 Maleate cis-trans isomerase" /codon_start=1 /transl_table=11 /product="Asp/Glu racemase" /db_xref="CDD:12801" /translation="MTVFERQTGKRVGMLTPSSNTVLEPYTSAMFAPFGDAASAHFGR FRVVEISMSDASQGQFTDAPILEAARSLAEAKVDLIAWNGTSASWLGLEKDRALCAMI EAETGIKATSTSLAYDHLFRGMGLKSLGLVTPYLTEVQDLIVAQYASQGIAVSADARL EEKVNHAFGTYSADQIAGMIREVAKSKPQAISILCTNFRGAPQAAALEAETGIPILDS VSVTAAHCMREMGLDPARVNNWGSVFQLFSDLHYPSQQREKQ" gene complement(19534..20934) /locus_tag="SKA53_00100" CDS complement(19534..20934) /locus_tag="SKA53_00100" /EC_number="3.5.2.2" /note="COG0044 Dihydroorotase and related cyclic amidohydrolases" /codon_start=1 /transl_table=11 /product="dihydropyrimidinase" /db_xref="CDD:28175" /translation="MTYDLIIRGARVVTGAEVVECDIGIREGRINALGQDLGPADEVI DATGLIALPGGIDSHVHIAQPSGPGIEMADDFASATRSAACGGNTTVMPFCLPEDGVT LRQAVNDYHAKADGQCHVDVSFHLIIKDTDAQTLGQDLPALFAAGYTSFKVFMTYAGL ALSDREILDVMDVAKAHNAMVMVHAENEDAIEFLRDKAEASGNTGPVHHARTRPIPVE REATHRAISLAEIAGVPLTIVHVSNGAALEEITRARRRGLKVFAETCPQYITLTADDL DRAGFEGAKYVCSPPPRDSAEQAAIWAGLEQGDFDLFSSDHCPFRFADSAGKDAQGAR ATFRNIPNGIPGVETRLPILFSEGVMKGRITLPRFAAITATNHARLYGLAARKGAICV GADADIALWDPNLTKPIRQTDLHHGSDYTPWEGFEVTGWPVRTLLRGQTVAKDGEIVG AATGDYLSRSAPEFLI" gene complement(20931..21647) /locus_tag="SKA53_00105" CDS complement(20931..21647) /locus_tag="SKA53_00105" /note="COG4126 Hydantoin racemase" /codon_start=1 /transl_table=11 /product="putative hydantoin racemase (EC 5.1.99.-)" /db_xref="CDD:13408" /translation="MTDNMAAIARATVGDLAEIIPVTATRGFPYIASRAEAQIAGGIV LEMIAEHASTVDAVVIAAFGDPSLKGARDLFDLPIVGMAEAAVMTAALLGESFAVVTF SPLMTRWYDECVQATGLGNRFKGVLTPDITPARLTDVQTDLGADIITMATTAATRHHA DVIILGGAPLAGLAPKIASQVPAIVIDPIAAAVLQAMTLVRMTAHAATPLRVNKPAAK TSIGLAAPLAMAIHHGGAAS" gene complement(21763..22644) /locus_tag="SKA53_00110" CDS complement(21763..22644) /locus_tag="SKA53_00110" /note="COG0726 Predicted xylanase/chitin deacetylase" /codon_start=1 /transl_table=11 /product="putative polysaccharide deacetylase" /db_xref="CDD:25772" /translation="MTERRDFKGYFGAEPPPNWPQGARLAVSLVVNVEEGAELSIADG DERNENTYEIREEVVGYPDPCMETHFTYGTRQGYARIAKAFETYGAKATFSSCGRAAE RSPWLLQDVVSRGHEVSCHGWRWERQAEMARADEAAMIARTHAAIETACGVAPVGWHT RSAPSVNTRDLLLEHGGFAYDSDVYDDDIPRMHDATHVILPYAFDTNDMRFSPGGGFV QHSDFSNYVIGAFDRLYAEGAGAVRIMSIGLHLRLIGRPGRIKGLEDVLAHITGKPDV WIAPRREIAAHWKVHAQ" gene complement(22641..23441) /locus_tag="SKA53_00115" CDS complement(22641..23441) /locus_tag="SKA53_00115" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10895" /translation="MTQTDRITIFFAWAVGIGCIIFLMLPIVITVATSFTSSSVYTLP PPEWSLRWYRSLERRSGLWEAVQLSLNLAFISTAISMVLGTMAAIAVARGEFRGKQAI ATFTVSPLMMPGLVVGVAMLQFFREIGLRDAYWSLLLAHVVITLPFVMRTLLASMGAF DFSLIDAARTLGMSYPRAILKVLIPNLAPAYLTGGLFAFLASMDNYPISIFLTDARNK TLPIKMLQYLEEQPDPSLAAMSSGLILMAIIVLVVASRTVGLNRMIET" gene complement(23438..24268) /locus_tag="SKA53_00120" CDS complement(23438..24268) /locus_tag="SKA53_00120" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10894" /translation="MIARSNRIALLAVPGLAFLAIIYALPLVMLLFKSIQGAEGLTLV TYIDFFRDEFNQTVLWRTLRVALLTTLLALVIAYPTAFAMARAKGIWLTVFMVALVLP MSLGVIVKAFAWSILFRSNGFLNTTLQAIGMTDGPVRMLFTETALIVGAANVFLPFMV LPIYSVLRQLNSSLPEAASSLGATPWFRFTRVTLPLSLPGVVAGSAFTFSLAISMYVI PSLIVGERQQTLSMLIARSFLYLRNEPLGSTISAVLLAIAIFVVLFSSWLAGRLGARQ " gene complement(24265..25359) /locus_tag="SKA53_00125" CDS complement(24265..25359) /locus_tag="SKA53_00125" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, ATP-binding protein" /db_xref="CDD:13158" /translation="MFAQATEQRPPAHRYLDVVGAAKSFKGTVVMDNMNFRVAKGELV SLLGPSGCGKTTLLRIIAGLLEADTGDIILGGRNVSSLPAHKRNISVVFQNYALFPHL TVAENVAFGLRARGMSKSDVKAPVAEALALVRMDTFADRPVSALSGGQQQRVAVARAL VVSPDLLLLDEPFSALDRKLRETMQIELKALLRSRGITAIFVTHDQEEAMGVSDRIAV MNSGRIEQFADPSTLYAQPASPFVMDFVGLSTRLTGHVIAQADGIATVKTHVGKVRAN SQLVVGTPVQVGVRPELITPDPSTEMNQIKVQLDDVMTLGSKTVLHGVTTGADKFLCE LPGIRTGYARGETVTWGWAVADTLIHEVPA" gene complement(25364..26359) /locus_tag="SKA53_00130" CDS complement(25364..26359) /locus_tag="SKA53_00130" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /db_xref="CDD:10556" /translation="MAAVGTFAAPSILRAQSSELVIGCAGSHTAWMEALVTPHMKASI GADIIFEGTKSSVNLEKMSSNKDAPYLSVVQMDDPVMIQAVEADLLVPITPDAVPNMT DLRPDATHMDGMWCNYVQPWAGVAYNTNMTNGVSSWAALWDPANAGRVVIPSLQNTEG MWTLMSAAMLGSGLPFVDAQYEIDAAFAKLEELKPNLLTVYSTMSQAFNLLEQGEISM LSGNFSSYTLPRKAEGVPVDLAAPAEGIFAMPSGICLVKGGPNPELAQAYVNEMLGPV MQAAIADFASSVPANTTVTAGAIIPDGVPIYSPDWSFVAANRAAWIDRFDKLMAI" gene 26610..27917 /locus_tag="SKA53_00135" CDS 26610..27917 /locus_tag="SKA53_00135" /note="COG0402 Cytosine deaminase and related metal-dependent hydrolases" /codon_start=1 /transl_table=11 /product="N-ethylammeline chlorohydrolase" /db_xref="CDD:28159" /translation="MACHLYNVALLCPTEGFVSNGSLTIRDGIIAARGAAPNPGETVI DGKGAMCLPGLINTHNHSPLMSVRGMVEDLGFAPAYTPGVPQGHWLSSEETQILARLG VMEMLCAGATTIVDYYRMPDALARAAEAFGLRAMIGGRVMDADTASLANGRFLHDPKL GEATLRAALDLIDTWDAKGNDRISTILAPHAPDTCSRQMLHTFADLSAKTGKQVHTHL AQSKMEVAQVRSREGLSPAELLEDVGLLSPDLVAAHCIFLDEADIRRIGKAGVVINHA PIGNAAFGAAAPVIALREAGAKITLCTDTKSADMFEAMRMAIAAARWRADMEFVLDAK TVFGWGTVDAARALKGHAASGTLSVGSPADLILLDPNAPNLRPVIDGYGIVVHSGSAA NVTDVMVAGEWLVKDRMPTRVDMDTVIRDAQKVAENLWKRASA" gene complement(27909..28595) /locus_tag="SKA53_00140" CDS complement(27909..28595) /locus_tag="SKA53_00140" /note="COG1802 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator, GntR family protein" /db_xref="CDD:11512" /translation="MDTPPPRSAPNGDVTAVAQWVADILRDRIIRGVLPAGARIVERK LSAELDVSRTPIREALKLLHADNLIDISRHKGAQVTEFLAQEALELFDVIASLESLAA ERLAERITKEQLATFEDLHAAMLTHYQAGEADAYFDLNSEIHDAILAACGNIILQNLH TKMMARARRGRFMAIMNPDRLKSAVEEHEQLMAALRTQNADAARQIWRKHLLNTGQSV TDVLRSQALG" gene 28861..28986 /locus_tag="SKA53_00145" CDS 28861..28986 /locus_tag="SKA53_00145" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSATDQTTLAVTVITANETEKCDETPARPEKACQKNEAAAL" gene complement(29023..29856) /locus_tag="SKA53_00150" CDS complement(29023..29856) /locus_tag="SKA53_00150" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="Spermidine/putrescine-binding periplasmic protein" /db_xref="CDD:10556" /translation="MRVVPDPARATGTGIVALDGAKAAIAQAVLAGWDIIALDEASEI AACGAGVLQKAPTSETTTADISTRFARRPGQGGAKSGCALTYDTRFEALAYRLDAFVL SPPSTGLAVFDTASFPGPRAVVWPPRALLEWAILAQGVPEVQVYDILSSARGMQIARA AILDIAPSIIWVDSDAEAAQLLATGQVTMAVAGEADLAVTAGIAAVVQAGKIGQRRSW IQLPSGAASSPTLRPADGIVAALAGDQSTYVPALWRDAAWYAQAGAHVATGLAGLGPE K" gene complement(30020..31780) /locus_tag="SKA53_00155" CDS complement(30020..31780) /locus_tag="SKA53_00155" /note="COG0038 Chloride channel protein EriC" /codon_start=1 /transl_table=11 /product="putative transport integral membrane protein" /db_xref="CDD:9913" /translation="MAHVPDTPSSVLGVTPFMMVRRIVTVLTVGLVIGAVTAIAAIAF VEAVLWLNDLLLVSSYAKVQSGLSPTVLLAITLGVPMCGGALVSFIVFRLAPIHRPAG PADAIRAVQLQTSMPDTRSGLLVTLGALGSLGVGASVGQYGPMVFFGAVIGGLVEKLK LAVPNINAIAIACGVAAAISAAFNAPIAGLVFAHEAILRHYSMQAFAPVTIASTVGYV VANVLFERAPVFVVQTGVSLHVPEFAIFALMGLLSGVVSIVYMRTLLAGARIGGRIAL PPEARGAMAGLAVGLCALWLPEITGLGQYTLRFATIQGAFGASEMAMILVGKIVLTAI CLGMGFVGGVFSPALIVGSMLGGLVWTGLTALGMEGLAAFPVYVICAMMAVTSPVIGA PLTAILIVFELTRSYELAIASMVVVVFSNVVAFRFFGRSLFDMQLFLRGCDLSQGRAE AQLSVLAVRDYAVVEAPIFDVSLGQDAVRAELDAHGWSEGYAIDANGLFRGYLRIVDL GEGSPAPVSDILRPAQLMFDADTSVRDAMRLLKDFVGDAIPIVDRDSQHLVGVVTEAA IVRAYLDIVAKLRNEENAGL" gene 32161..32352 /locus_tag="SKA53_00160" CDS 32161..32352 /locus_tag="SKA53_00160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKNTNLSGFTTAQAKSETTMDKTTRAVKQIKDAETKHREDKMA RLRKARHESEAEALGKPIA" gene 32749..33225 /locus_tag="SKA53_00165" CDS 32749..33225 /locus_tag="SKA53_00165" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSSIQNDPSKQSVIREIAYVRAMGAVDHTLRASANLGVYEFILL LLEQGEPGLPLYATLDRVKSRYTTRSGMIKRIAELRKQGLLIERKGKKQSEVLLQPSQ ELVDQLLPILGIRGDAQRVNYSGVTLCQIPDESKEMRISTILSADTKSSLTLLRQA" gene 33235..33600 /locus_tag="SKA53_00170" CDS 33235..33600 /locus_tag="SKA53_00170" /note="COG2188 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKSPIEKELERLRYLAATKSLKVFIKYPEYWELMLLIAINENNQ EIGIEDYLDNIATMQVNRVTVRNFIKDRVAEGTIISRQGEKKSRRMLTLSDKVTEELK DYFQYFHIKINQFAPRDEK" gene 33663..35033 /locus_tag="SKA53_00175" CDS 33663..35033 /locus_tag="SKA53_00175" /note="COG1538 Outer membrane protein" /codon_start=1 /transl_table=11 /product="agglutination protein" /db_xref="CDD:11252" /translation="MHFCSHRLNLLNALAISTALASCGQSPDDIATMRVVIDEQILLD SQDVEATAAAPLPFAQFEAALLLAVSQNELYRAALAAEIAAKAQVEVASSGTRPQISS SLNAGLIQDASSNNGDVEKGAIAGVNLSQLIYDGGETTANINRANAEVLIAEADRMVR GNDVASRASQAWVDVWKHQSRAELLASRLTKLNELVGQIERMAANGMVDRSVVDSATR ERLEFEMVDLNIQADLQDAELRFERLFNTSPARLRLPENVLTATDIMAAASAPRQAPE LQLSAAELIVARSAVARAEAGFEPRIRLQAGLRSPVDQQDDANGSLGVVVEYVIGDGG RRQSQLESATAQMQRSEAQFTASKQAFETELNISVARLDAIERSLPVVTQREALAAER IETLQSQLATGQTGLSQLIDAEIELYRVRDQLVTMRAEREILFLTTGARLGLLARQIG LLDADS" gene 35113..37317 /locus_tag="SKA53_00180" CDS 35113..37317 /locus_tag="SKA53_00180" /note="COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain" /codon_start=1 /transl_table=11 /product="ATPase" /db_xref="CDD:11980" /translation="MQGFQSNQQETEDADQADHQVESRANGADTPDVAGAPDVETAQS FDEMSLILAVKFILAKTGFSFSTAAVRDLAELSSDVFGPRAAVSAFQHLNFEANFGEM PVTALKQNHCPAIGFTHGDQAVVITSVEKDGAIEIVRFNKDMSQTVERVQKSDRAGLL QPHFVLCRKMHVSVKPKGKNDWFFGSFLQGKWLYGQVIIAAALTNFLGLSTSLFIMVV YDRVVPNQAIESLIALTIGVMLALGFDFIIKTLRSQFVDRAGKRADSRMLRLIFDKIL NMKLDHRKQKAGAMASIVREFDTLREFFTSATLIAVVDIPFIFFFIWIISLIAGPLAI VPLIAVPLVILSGLVIQPFLALNTKNAMQSNMSKQSVLVETLNGLETVQATGSGRLMR RRFEEAADAQSELGLKSRMLSQFAINSAASIQQFAQIATIFYGVFLIQDGVITMGAMI AAVILGGRTLAPLSQLAAAMSRANGALEAYRSLSSVMASSKDDPDDTVQRLSRPKMSG SVELRDVSYSFPGSNNPIIKNLSLKIEAGEKVAIVGRMGSGKSTVSRLISGLIVPSEG AVLIDGVDVRQIDKSDLRRNLGIMLQDTWLFSGTIKENLQMGFYEYDDAHILEIAKIS GVDDFVASDPRGYEMELKERGEGLSGGQRQSINLARALLHDPAVVVLDEPTSSMDTVT EKGVVERLKRWSGDRTVIMVTHRNSLLELADRVLVVDRGSIVADTTPDRIRS" gene 37337..38647 /locus_tag="SKA53_00185" CDS 37337..38647 /locus_tag="SKA53_00185" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="Type I secretion membrane fusion protein, HlyD" /db_xref="CDD:25537" /translation="MSSINFKALSRDMAGREGLSGSTILATIVVLVVSIGIWANWAEI DNVTRGEGRVISSVQNQLVQAAEGGVILRRFVSENTIVAADEILFEIDPIDSSSELNR LNQRLTGLDVKESRLRAEIEGSEFDPPNHVSAMSPLVTLTEQSLFAARRAELAGRIAV LEQRLQQRSQDLVAAENVSGTAERTVALLQEEIELVEPLVRDNIVPATRLLELRRQME QARGDGERAAVSIAQAGSGMAELEAEIANARDNYTLRAMDELNDVVAEQSELREALPK LEERVSRTIIRAPMEGIVSRLNFRTPGGFVATGDVMLELVPTGEALVVEARIMPQDIS RIRLDDDVRIRLSAYDSSKYGSVAGRVIEISPDAVADEQNPNAASSYLVEVAIEGELR VDSGEIVTLIPGMTATVDVLSGKRTVLEYIWQPVAKIQELALRD" gene 38898..41396 /locus_tag="SKA53_00190" CDS 38898..41396 /locus_tag="SKA53_00190" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNKIVSTDFITDDVQRLVPVDATATTPKNAAVAKLMKAWEAKTT QRTAKGAGLTLMALSLAACNDDNTTAAAPTTPTTPTTPVTPAGQTFTLTPLVDIASDT TALTGSAASTFRFTGADEVVNGMTATMAATDTLLDGSTTDNDVLNVTLTGATTITTMN IETINLSYVVAAADFTGANTGTTTYNVSGAVAGVLSTPASAATIALNDYDRVLTVEGL TLTGTTAAGSAESMSIALSGASYGTTAATQTGVTIDGTDGEQLETLNIASNGSSANSF ALAFQSTETVGTYTITGAQDLTMRVADAKVSGTTINATGNTGTVAISLDTGSGITVSA ANWTGVDNIVLRDSDTTAGAATLNSTASGQNVVVANSVSTLTVAATGATYTAPAAAAS LELNGTSTTSGVTVTTYAVQNATALNLSSLGLASSTSTTAANTISNLDGDFTRINITG DTSLAITDLDIEATETATTATTARAVVLDASAMTGNAFVNITASADSKVSYSITGTAG ADTIVMNQSGGTVISGAGNDTVTSGNGADTVSLGAGTDTYNVSFGVDTLTLGAGNDTV DIDAATASAVAQVSTVVNSTATYTHVGTVSDTISVTINGTVYSTTIGAAGGTADIAAA SSLSQFITEHATDILTAHGISVTNVVASTATDDIIATGKADGTAFTISARTVDASNSN AQADLTITATTEGSAAKDVATTITDFVAGDIINTVGLTALGTGGYVEGLANVSNVTEH GVIVITDASYASVAAAEDALQTKTAATTGDVTTTTAGIVVFLNSTTGTAQAFLDNDID SDGTLADSTVVFTFSNITNLTDLASIMSADSFVI" gene 41547..42428 /locus_tag="SKA53_00195" CDS 41547..42428 /locus_tag="SKA53_00195" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MPRYELITKTGFAAQAWRRVDSYAFAATDAVAPLVVQELAKACM SLPIAFIQQNDAFVPHAVQGLEPGRNLFVVNGTWVTPYTPAVYRGYPFGLAQGDGDDL HLCIDMDSGLVGAGEGFDQPFFDEAGEAAQPVKDALNFLQQIHRNRAVTQRVCAALAA EDLFQPWPLTVQSPDGERRVDGLFRIDEARLNSLDPDALARVQKAGGLAVAYCQLLSM GNIQTLGLIQRKLAEVKTRMPEMSDQIDVDGILQRHKSSEPEQTLEPVSNDNVVNIAS DEGDFDLSAFVKAKQDD" gene 42500..42703 /locus_tag="SKA53_00200" CDS 42500..42703 /locus_tag="SKA53_00200" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDTKAATITIDDKAYELTDLTEAARAHIANIQFVDAQIRQLNN EWAVCDTARMAYEAAFKRELAKT" gene 42754..42951 /locus_tag="SKA53_00205" CDS 42754..42951 /locus_tag="SKA53_00205" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPKISVDGTEYDTENLSVNGKAQLASLQFLEVQMQKLKNEIAVY QTARAGYAAALNNELAKIEAA" gene 42956..43237 /locus_tag="SKA53_00210" CDS 42956..43237 /locus_tag="SKA53_00210" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILAVGMIGAAAMLSAYSPMAVAQTQPAPDTNTVLNTG TDALLTMPLLADKGWFVHAYGGRVRACTADGASVAGERPAPKCSQWSEY" gene 44603..44956 /locus_tag="SKA53_00215" CDS 44603..44956 /locus_tag="SKA53_00215" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNDKFLECGRLWQLGPDWRGQRCGAKTRAGTPCKNPAVTGKARC RMHGGKSTGAKTAEGRAKLSALHLKHGRSTTAAKAEAKRRAQVGREIRAELRDIEREA IAGGWLAKTWKDQFE" gene complement(45158..46273) /locus_tag="SKA53_00220" CDS complement(45158..46273) /locus_tag="SKA53_00220" /note="COG1066 Predicted ATP-dependent serine protease" /codon_start=1 /transl_table=11 /product="RecA-family ATPase" /db_xref="CDD:27817" /translation="MTENSQLQELLAQAMPNQAPPPRNLFPFVVSATELMKRDMPPKQ MLLSTFMPRSSFGMVVAPRGIGKSWFSLALGVAISTGQGVFLGWKIHQQTRVLYVDGE MQTIDIRDRIKALSGGQELDSLDILPSEELYQEGRPVCLDDRTEQSQIEAMLNALEAE GRRPGLIILDNLSTLRRGVDENSNTETQSLVDFLVKLRHSTYAVLVVHHTNKAGKQRG ASIIEVPMDYVIELKKPEGGAIFHQGANFELSFSKIRGRAPENANFVAVLDEDADGKL AFSVDHAAFEVSDDIMVLRVVAESQKIPTQRAIAAKVGCSAGKANKVIQKLAKDGMIE KDARGTRLTDYGRYALHEAFPDRYDPPPNPERFQIPF" gene complement(46270..47052) /locus_tag="SKA53_00225" CDS complement(46270..47052) /locus_tag="SKA53_00225" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSDMTPLEVALMVAGTTGYRVFPSNQQKKPCVKDPFGRATNDKA GIEELFGNFPNAMTAIPTGPINGVTVVDLDVKGGVNGIETLRGLIDDLPPTMLVRTPS GGIHLYFRTGSEGLPSSVGKLGPGIDIRGSGANAISFGSTSQKGMYRWDHSVSGFTWR PAPMPADLKRLIYAATPSSGTQTTNGYTRSDVGERLTTPIVTGQRNSELASRIGYLLK VYSPQEVHDLAHHMNKTLMTEPLILKEVDEVFCSILKRELRK" gene complement(47049..47636) /locus_tag="SKA53_00230" CDS complement(47049..47636) /locus_tag="SKA53_00230" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMSKQTKAALIAAAQQAYDWSGAFPAACLPGVAPLSQGAPAQSE AQMVRDFKRHKKGLVGLRSSSKGLAILLRNVPVGVDRPSELARRFFDPDRYLVTRTKT VDLAAGRITLIDTVVIKSPFGFPLGMRTKDPSIVLVPDDSWALFSTAGETVIGFQRAS LAMSLQQLNGGTFTNRDIMELSPDDWATLLGRDAA" gene 47635..47823 /locus_tag="SKA53_00235" CDS 47635..47823 /locus_tag="SKA53_00235" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKTSDIGAPFLVGREPCFEITLAPADDAFADGDTRRHAALTVQI ADMPRAAAQKFGYLIDAK" gene complement(48343..48666) /locus_tag="SKA53_00240" CDS complement(48343..48666) /locus_tag="SKA53_00240" /note="COG2944 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family" /db_xref="CDD:12292" /translation="MGVYKTDGAAPAGRIDVSRVDATTEAEIKRHMLEDDLAALADAG DYARQIRRRLGLTQVQLATKLDVPIDTLRNWEQGKRYPTGPAKALLKILDRAPEAALA ALNGA" gene complement(48647..48922) /locus_tag="SKA53_00245" CDS complement(48647..48922) /locus_tag="SKA53_00245" /note="COG2929 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12278" /translation="MEFEWDDDKSEACLRQRGFDFAYATQVFFDPGRTVLPDDRMIYG EVRYQVYGTVTGRLFVVVFTQRGGRFRIISARKANQREVKRYGRLQN" gene complement(49080..50285) /locus_tag="SKA53_00250" CDS complement(49080..50285) /locus_tag="SKA53_00250" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Phage integrase" /db_xref="CDD:27722" /translation="MPAVELTSTLVATVVCPDSKRKEVFFDRRAKGLALEVRISGGRT YYLRYSDDRSKTRYIKLADAGDVTLPQARTLCERMRNKIAMGVDPLKERAGKKLVPTF EAFAWNSYMPFSQANKRSWKTDETLIRTHLIPAFGKKHLDEITTEDVLSMQQAGLKAG AAPGSVNRRLILLRYMFNTAWRDWKIAGVKENPTHGVRLLKENNKKERYVRADEMARL YAEICSSQNTMLKHVVAFLLLTGARRNEVLHATWQDINLTTGKWRIPDTKSGYARHLP LNDGAMAVLHQMQGVSRSQYIFGNPKTGKPYVHIYYAWDTARRRAGLPDVRMHDLRHT FASLLINNGRSIYEVQKLLGHTQIKTTQRYAHLTQETLLDASNIGTAAMAATLGMGSH GDVIEGRLC" gene 50343..50636 /locus_tag="SKA53_00255" CDS 50343..50636 /locus_tag="SKA53_00255" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:16530" /translation="MSSRTDEMKISIVLRAARSGLGISQADLASELGVSQSTITRCER GAGSFPANILLRAISFFRAHDIDITGVLEDNPTVVFRSQMFETLEKNRETSPD" gene 50923..52983 /locus_tag="SKA53_00260" CDS 50923..52983 /locus_tag="SKA53_00260" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSATLSGGLATSTITNVENLVLTDLAAGEVVFSTSSATYISGVQ SVKYVQSAGDITLTRIVDAASVTLENVVDDVTITFADTVLAGTNDTFTLNVSGFVLAG GDGFENIDVGSVSDTDGDIETLVINATGAASDFNDLDSAFVEVSTVTVTGSASVDFGA TAAFTSLATFNSSASTGGMTLLLGADGVSGTTNAKTLTFGAGADALDLGVLAPADIGV LTVDMGAGADTVDLDDYADTTMIISGGEGTDTLVSAAVITAANATTISGFETFELGAN AGTQVMSDLATGNTFTTLTAGAATTTFTNVGAAVTTFNLKGGVATTAATLTKLIDGSA DSLTVKATTADAGLTGDLSIDEIETVTFDSSAFNLVVAGDITSTDLTSVTLVGTNLIT LGANGTKEFSSTKIATLNATGVTGTEAVNVFAINNTVAMTVTGPASTGTFTLDTGSGA DIITAGSGILDVDAGAGDDTITGGALADVLEGEAGNDTITGGEGADYIGGGAGVDTIT LTETTVLADEVELSVGAANYDNIIGFDFGGTATDDNLSALDATFAWLGVGAATNNDGA VALSTGASIKAAEVADDNATVLTISTNVAGGTFAAFMAGTMTEATMEANVITALGLTG AMSTTDVIMVLVDDGTHTGVFKFTGADAATDDAVDAAEIEIMAVLNGVSDATSILAAD VLFA" gene 53212..54093 /locus_tag="SKA53_00265" CDS 53212..54093 /locus_tag="SKA53_00265" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MPRYEHITKNGFAAQAWRRHNSYAFAGTDAVTPLVVQELAKACM SLPIAFIQQNDAFIPHAVQGLEPGRNLFVVNGKWVAPYTPAVYRGYPFALAQGDDDQL HLCIDMDSGLVGAGEGFDQPFFDDAGEAAQPVKDVLNFLQQIYRNRAVTQRVCAALAA EDLFQPWPLKVQTPKGERRIDGLFRIDEARLNSLDPAALARVQKAGGLPVAYCQLLSM GNIQTLGLIARKLEELKTRMPEMTDQIDVDGILQRHKSSEPEQTLAPVENDNVVNIAA DTGDFDLSAFVNPKQND" gene 54165..54368 /locus_tag="SKA53_00270" CDS 54165..54368 /locus_tag="SKA53_00270" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDTKDAKITIDEQEYAVADLTEAARANIANIQFVDAQIQQLNN EWAVCDTARMAYEAAFKRELAKA" gene 54422..54619 /locus_tag="SKA53_00275" CDS 54422..54619 /locus_tag="SKA53_00275" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPKITVDGIDYDTENLSVNGKAQLASLQFLEVQMQKLKNEIAVY QTARAGYAAALQNELAKIEAK" gene 54624..54884 /locus_tag="SKA53_00280" CDS 54624..54884 /locus_tag="SKA53_00280" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILAVGMIGAAAMLSAYSPMAIAQTQPAPNSGTDALLT MPLLQDKGWFIHAHGGRVRACTADGASVAGDRPAPKCSEWST" gene complement(55120..56457) /locus_tag="SKA53_00285" CDS complement(55120..56457) /locus_tag="SKA53_00285" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Phage integrase" /db_xref="CDD:27722" /translation="MPVIDLTAQFVASAVCPSTKRKEVFFDRRVKGLVLEVRTSGGMT YYMRYTDDRSKTRYIKLANVGDITLPQARGLCRQHRNKLALGIDPLAERAVKRLVPTF GDFVRERYLPFAQANKRSWKTDETLARTHLTPQLGTMHMDEITIEDVLSLQQIGLKAG AAPASINRRLILLRYMFNLAWRDWKIAGVTGNPTHGVRLLKENNQKERYVRAEELALL YRAVKESQNKMLQHIVAFLLLTGTRRNEVLHATWEDVDLIKGMWRIPQTKSGFARHVP LNDGAYAVLQQMQGRSQSHYIFGNPKTGKPYVHVWYAWNSARVKAGLPDVRLHDLRHT FASLLINNGRSIYEVQKLLGHTQIKTTQRYAHLTQETLLDASNIGTAAVAATLGMVPQ RNVIEGDIYDAVELAPDRQAGNRRRAAISTGSEMPNAAIGQVLDPGSQMHPAG" gene complement(56653..56820) /locus_tag="SKA53_00290" CDS complement(56653..56820) /locus_tag="SKA53_00290" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILAVGMIEAAAMLSTYSPMAFAQTQPAPNSGTDAPLI MPLFTPKAANH" gene complement(56825..57022) /locus_tag="SKA53_00295" CDS complement(56825..57022) /locus_tag="SKA53_00295" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVKITLDGIKYDTESLSVNGKAQLASIQFLHVQMQHLKNEISAY QTARFGYATALKAELAKVEAK" gene complement(57070..57273) /locus_tag="SKA53_00300" CDS complement(57070..57273) /locus_tag="SKA53_00300" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIDTKDAKITIDDKQYMIADLSEAARAHIANIQFVDAQIQQLNN EWAVCDTARMAYTAAFSREMQNA" gene complement(57342..58223) /locus_tag="SKA53_00305" CDS complement(57342..58223) /locus_tag="SKA53_00305" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MPRYELITKSGFAAQAWRRHNSYAFAATDAVAPLVVTELAKACM CLPIAFMKQNDTFVPHAVQGLEPGRNLFVVNGTWVASYTPAAYRGYPFALAQGEVDQL HLCIDMDSGLVGAGEGFDQPFFDEAGEAAQPVKDALNFLQQIYRNRAVTQRVCAALAA EDLFQPWPLTVQGPDGERRVDGLFRIDEARLNSLDPEALARVQKAGGLPVAYCQLLSM GNIQTLGLIARKLDEVKNRMPEMSDQIDVDGILQRHKANDNLDSLETDNDRNLVNVVA DEGDFDLSSFVNSKHRD" gene complement(58452..60353) /locus_tag="SKA53_00310" CDS complement(58452..60353) /locus_tag="SKA53_00310" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="S-layer protein RsaA" /translation="MSLTAGLDTIVGGAGDDTVSGLVDAQTPASSTLNAADNINGAAG SDTLKITTQGTTAITDATNGAAITNVETVEIRAVSTAGVTLSGANLPGVTLINNNLST DALTLTNLADTTAIQVTGNGVATNGATTATYVAAATSGELTITGGVTAGAIAVDGTGL TSLSITSSGAANTTGAISTTGTPTAVTINASTALTTTGLTVGANAAAQTLTITGAGTV TLGTLDADFATVTASANTGGVVATLSTLVTGATTGSAGNDTFTTAAVLTTGSVNAGAG TDTLVVAASAQLASATLGAKYTNFETLNVADGVSVDLDNIAGITAVGITAGGAATGVT DLTATQAAAVTMIAGNATTTIGVKGATTVGQIDTVKITYSDGDSTLNEDINGAASNLT LAGVENLEVTSVDAAEIVQSAATSGSLTSVKLFGAGNHSFTTGNMATSNFTLDASGST GTNTLSAATFATNGVAITGGSGADTITGSGQADVIIGGAGNDTITGGDGTDTVTGGAG ADTFAFAAGDNAGADGAAVADIITDFVAGTDKLQFGNTDIVSAQQSAVQAAVTALAAG STDAQIATAMVAANTTVEGVSFAVFNGNTYVYVETTADALTHVEANGIFIQLTGVTTL PLFATDVIA" gene complement(60445..60699) /locus_tag="SKA53_00315" CDS complement(60445..60699) /locus_tag="SKA53_00315" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGISKSKLARAETAAGSISSGDLEYALSVFRSAGVMIDLTIEGD LRLTVPDNKLHLIEAAITAGMGADGSFDEVASDPKTSNPK" gene 60860..62065 /locus_tag="SKA53_00320" CDS 60860..62065 /locus_tag="SKA53_00320" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Phage integrase" /db_xref="CDD:27722" /translation="MPKARLDSQFVSHADCPEGKRKQTYFDTSTRGLCLEVRISGGRT YYLRYSDDRSKTRYIKLADAGDVTLPQARTLCERMRNKIAMGVDPLKERAGKKLVPTF EAFAWNSYMPFSQANKRSWKTDETLIRTHLIPTFGKKHLDEITTEDVLNMQQAGLKAG AAPGSVNRRLILLRYMFNTAWRDWKIAGVKENPTHGVRLLKENNKKERYVRADEMARL YAEICSSQNTMLKHIVAFLVLTGARRNEVLHATWHDINMTTGKWRIPDTKSGYARHLP LNDGAMAVLHQMRGVSRSHFIFGNPKTGKAYVHIWYAWNTARKKAGLPDVRMHDLRHT FASLLINNGRSIYEVQKLLGHTQIKTTQRYAHLTQETLLDASNIGTAAMAATLGMGPH GDVIEGRLC" gene complement(62141..62527) /locus_tag="SKA53_00325" CDS complement(62141..62527) /locus_tag="SKA53_00325" /note="COG3744 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13064" /translation="MKLLLDTHILLWAAYTPDRLSAKAQAMIADTGNSLYFSVASLWE VAIKASLGRDDFRVDVAELRLGLVANDYAELAIESAHVLRVPTLPPIHADPFDRILVA QAMAEGFVLVSNDAKLKAYGGPVWDV" gene complement(62524..62763) /locus_tag="SKA53_00330" CDS complement(62524..62763) /locus_tag="SKA53_00330" /note="COG4118 Antitoxin of toxin-antitoxin stability system" /codon_start=1 /transl_table=11 /product="Prevent-host-death protein" /db_xref="CDD:13400" /translation="MKTINIHEAKTHLSKLVEAAAKGEAFVIAKSGRPMVKVTMLEGQ LQKRLGFLAGKGTVPVDFDEMSADEIAQMFAGTEA" gene 62888..63523 /locus_tag="SKA53_00335" CDS 62888..63523 /locus_tag="SKA53_00335" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDLKMPKKVSPLNKRKGFVGIDPDQSLNEILELISDRPCPAVCS KFYPDRGHFYMLHRWLACLLLEEGLHERKATPELELAQEHLCHALLCLANNKQADYLS PDRKSGPRHHDDNVREATLCAAARFNYAQLIGLHKGVERWWATIVRKSDPLYKLPTNL GKLIGNVEQGNSIADKSTLLSFYACFIDATPNEAEQHSLLLKEHVERILLP" gene 63779..64693 /locus_tag="SKA53_00340" CDS 63779..64693 /locus_tag="SKA53_00340" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAHRADGGTVMEFEINMQLLSTPADLSLRDKKALAAASWVRMGI DIILVEHGIPIKDTRSRAERMSPVDTYFYVLEQPEQINIALRTGPKTGLVALSVYTDA PGVGLHTLEERGFFCPQDDPLIRHETITRGQSQGRFHTVLFYSGKDQFLETGLDDLPG VYVRSSGELILLPPHELNFDSEFGLVARSIYECDDILAPVAIPYLPDGLRKMIRAAER QALADKRKPKLRGGVLPELYTPVAEGGRNNALARRAGFLLGVRKLTEEQTLKELLDIN QRCCQPPLGLCEVRNIARSIAKKHHRHG" gene 64686..66596 /locus_tag="SKA53_00345" CDS 64686..66596 /locus_tag="SKA53_00345" /note="COG5519 Superfamily II helicase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="DNA primase domain protein" /translation="MDDRTSLVAQLRADSEAARQAAEVAEAALEAQRQYADFGGALHM LKVTREKQAIPVRLCNFTAEIEREVVKADGLTTARHFTVSGRMETGNPLPTIDVPASE FDRLEWLATEWGASPQIFVGSRYRDHVAAAIKERSDPELVQLCQHTGWAKFDDELLYL TASGGIGTEGLNEEARCELQGSLADFSLPAPADPRTLGLADLLGAFRDVQKDGVGLVL LGGVMRATLCHFMPATLSIYLQGTTGTFKSAFAGVLQGFWGIKFDGANLPANWSSTGN ALEKTAFLAKDALLIVDDFVARGTRHEVAKTHANAERLLRAQGNQAGRSRMTSKAELR NAFHPRGIILATGEDIPNGHSLQARLVIVNVARGAIDTTVLSGLQKLARDGVLAKVMA SFVQWLAMESKRNALHEFIGMALEIDRENIGASGHARTQDNLANLLMGLRVFLDFADD AGEISSQVTQGFMDIAKDAACTLADLQAAIDHEASDAQRFVDLMRAAVSSGKAHIERS SGGKPDNARALGWRDVDIGQSGIRTEAMGTRIGWVDGEELYLDPTASLSVIKALASGL DNHLGSSERAIAKSLREAGLLSRCDKSRNTTKVSVLGARRSVYVFRMADIFDLDSASA SPIGYDDADIPF" gene complement(66808..67176) /locus_tag="SKA53_00350" CDS complement(66808..67176) /locus_tag="SKA53_00350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGISFKEAAQMWQFGPDWPGQACGAKTRAGTPCKNPAVTGKARC RMHGGKSTGAKTPEGRARLSALHLKHGRSTTEAKAEAKRRAQVGREIRAELRDIEREA IAGGLLAKDWREMFEPKPDK" gene complement(68771..69040) /locus_tag="SKA53_00355" CDS complement(68771..69040) /locus_tag="SKA53_00355" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILASGMIGAAAMLSAYSPMAIAQTQPAPTPATGTDAL LTMPLLEDKLWFIHAYAGRVRACTADGSSVAGDRPAPKCSQWSAY" gene complement(69045..69242) /locus_tag="SKA53_00360" CDS complement(69045..69242) /locus_tag="SKA53_00360" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKITVNGIDYDTENLSVNGKAQLASLQFLEVQMQKLKNEIAVY QTARAGYAAALQNELAKIEAA" gene complement(69293..69496) /locus_tag="SKA53_00365" CDS complement(69293..69496) /locus_tag="SKA53_00365" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKKTKEPVITIDEKEYAIAGLSEAARAHIANIQFVDVQIQQINN ELAVCDTARMAYTAAFSRELAKA" gene complement(69568..70344) /locus_tag="SKA53_00370" CDS complement(69568..70344) /locus_tag="SKA53_00370" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MTELAKACMCLPIAFIQQKDAFVPHAVQGLEQGRNLFVVNGKWV APYTPAVYRGYPFAVTEGEDDQLHLCIDMDSGLVGAGEGFDQPFFDDAGEAAQPVKDA LNFLQQIHRNRAVTKRVCAALAAEDLFQPWPLKVQTADGERNIEGLFRIDEARLNSLD PDALHRVHAAGGLPVAYCQLLSMSHVQTLGLIQRKLAEVKNRMPEMSDQIDVDGILQR HKSSEPEQTLEPIENDNVVNIAADEGDFDLSAFVNPKQND" gene complement(70529..73258) /locus_tag="SKA53_00375" CDS complement(70529..73258) /locus_tag="SKA53_00375" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNAGDSVTGGAGADVLAVFSSAAATLGGFVVTGVETISASSNSA TATDVLSLNLGSVTGETDLRVTGSSSSVTFTNTDNIANLTLSYNSAGNVIVAYNTSTI AGTADVQSLTTTDATNGVVTLAGIETVNIANSGVSTIATLTTAAATTVNVTGSGTLTL TDIDDVTTTLNMSAFTGTSVTGGYGAVNIAVTGGTGNDTFIVDMANITSLDTITGGTG TDTLRINDSMTTAADVAGITGIEVVELRNTGTGANDDTVDASIFATASINIRVADTND GTNAELVTVSNAGSTQSITMTDSTETEVNDANDGVSLTVTQKAGVGGSTDVLNLTLSG ETVLAVTANEYETINIATAGTVASSVATFSATTAQNIVITGSQALTLTAVDMEEQAAS PLATSKIDASAFTGALTLTVTNDEGDQIITGGSGNDTFTLGTSSLDSDDSIIGNGGTD TLVVTNFTGAAGEVNIDVERLTLELTTGAASSIDLRNATSLQRVTVDLDATDENITVS NIASSAAVILQDTTAADTDVVILSGITGDTDLTVTFSDEAGAADFNAALTANYDNLTL ATNDSADDITVAVLSATTLDNLTLTGAGDITISSATNTTSLDVLNASGVTGAITLTSL ARDGSAVITLGAGNDSINLVTTSHAGNTIAAGAGTDTLVISGASTSNIVINLASTTDQ ITNVSGAANSAAQTGFENVNASSVTVSGVNVTGSTVANTVVGTAQADTITAGTGALTV TGGAGDDVITLGSSVDTVVLTATAASASAGGADTIVGFTAGTGGDVMDISAFIGAAFT AANFDSATNATGDGALDDLHVERVEYAGNIAGLNFGTAGAANFDLVFGTAVYLSTDDN SAKTIIAVQGDDQTHIYTQTDPGGALIDAGDITLIAILSDVTNATDLVAANFA" gene 73819..75024 /locus_tag="SKA53_00380" CDS 73819..75024 /locus_tag="SKA53_00380" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Site-specific recombinase XerD-like" /db_xref="CDD:27722" /translation="MPKATLDTQFVSDAFCPEGKRKETYFDTSMNGLCLEVRISGGRT FYLRYRDTRGKTRYAKLADAQHVTLHQARTLCGRMRNKIAMGINPSAEKSIKRQVPTF GDFAQDRYMPFSQANKRSWKTDETLIRTHLIPTFGKMHLDEISTEDVLNMQQAGLKAG AAPGSVNRRLILLRYMFNLAWRDWKIAGVTENPTHGVRLLKENNKKERYVRAEEMARL YDEVCGSQNIMLKHIVAFLVLTGARRNEVLHATWHDINMTTGKWRIPETKSGYARHVP LNDGAMAVLQQMQDVSRSQYIFGNPNTGKPYVHIYYAWDIARRRAGLPDVRMHDLRHT FASLLVNNGSSLYAVQMLLGHTQIKTTQRYAHLTQETLLDVSNIGTAAMAATLGRSLH SDIIKGRHC" gene complement(75036..75101) /locus_tag="SKA53_00385" CDS complement(75036..75101) /locus_tag="SKA53_00385" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFDREEGQTFLPGPLAAMVAL" gene complement(75825..75898) /locus_tag="SKA53_t00544" tRNA complement(75825..75898) /locus_tag="SKA53_t00544" /product="tRNA-Arg" gene complement(75959..77359) /locus_tag="SKA53_00390" CDS complement(75959..77359) /locus_tag="SKA53_00390" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /db_xref="CDD:10512" /translation="MVNSLSGRFLILTIIFVMIAEIFIFVPSVARFREDYLRARLERA QIASLAVEVDAMISPALEAELLENAEVYNVVLRRDEIRQLALSSKLPAPIAATYDMRA PSGVTLIADALGTLVQKEDRIIRVIGNPVRDGGQLIEITMDERPMQAAMREYGRNILI LSAFISVMTAGLLFLSVQILLVRPIKGVVAHMQSYAKAPEDARQIITPTARVRELRDA EVALQMMQTQLTGALRQKERLAQLGGAVAKVSHDLRNIMTSAQLFTDRIGGSDDPLVK RMAPKLVNSITRAVNLCETTLAFGRVDEPAPALTRVNLSRIVEDVIDSERLAAGDYPL SFAEDIPATMTLRADGEQLYRVIFNLVRNARQAIMATGEPGEIGLHADEDELIWRLTV RDTGPGMPQKAREHLFQPFQGGVRKGGAGLGLVIAADLIRGHGGRLELRDTGARGTTF VIQLPKADLALADTAQ" gene complement(77375..78793) /locus_tag="SKA53_00395" CDS complement(77375..78793) /locus_tag="SKA53_00395" /note="COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /codon_start=1 /transl_table=11 /product="mercuric reductase, putative" /db_xref="CDD:10966" /translation="MNRITTDICIIGAGSGGLSVAAGAVQMGARVVLIEGHKMGGDCL NYGCVPSKALIASAKQAHMMRHGAPYGIGAVAPTVDYAAAKDHVADVIATIAPVDSVE RFTGLGVHVIQDYGRFISKTQVQAGNTIITARRFVVATGSSPLVPPIPGLADVPYHTN ETIFDLREKPDHLIIIGGGPIGMELAQAHRRLGCDVTVVEGAKAFGKDDPETAAIVLD SLRAEGVVIMEDAQAEKISQKDGKITVQTAKGDVTGTHLLIAVGRKVNTDTLDLQKGG IAYDRQGLKVGPNLRSVSNRRVYAAGDVAGGLQFTHVAGYHASVLIRSLLFALPSRQR TDHIPWASYTDPELAQVGLTEAQARKKFGSRLEVVRFDFHHNDRLIAERKTKGLIKVM VVSGRPVGVSMAGHLAGELIGIWAMAIANRMKMSAIAQTVLPYPTVGEVNKRAAGAYF SPRLFQNPKVKRVVGLVQRWLP" gene 78856..79044 /locus_tag="SKA53_00400" CDS 78856..79044 /locus_tag="SKA53_00400" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAGRVTCVLLDGVFQGAGIATSRGIDAKQADVSVYDPESCAKLQ AGTASALTASHAPSKEQV" gene 79102..79236 /locus_tag="SKA53_00405" CDS 79102..79236 /locus_tag="SKA53_00405" /note="COG0230 Ribosomal protein L34" /codon_start=1 /transl_table=11 /product="ribosomal protein L34" /translation="MKRTFQPSNRVRKNRHGFRARMATKAGRKILNARRAKGRAKLSA " gene 79253..79645 /locus_tag="SKA53_00410" CDS 79253..79645 /locus_tag="SKA53_00410" /note="COG0594 RNase P protein component" /codon_start=1 /transl_table=11 /product="ribonuclease P protein component" /db_xref="CDD:10464" /translation="MSVLKPPAEPDTGAPAVCVCLTVLTKRADFVRASHALRQGTPGI HLQARERARGEAAGIRVGFTCSKKVGNAVARNRAKRRLREVARQVLPEQGRDGWDYVL VGRHDVTASLPFDALVADLRRALRKVHA" gene 79642..79863 /locus_tag="SKA53_00415" CDS 79642..79863 /locus_tag="SKA53_00415" /note="COG0759 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:2337" /translation="MTPFAYILSLPVRAYRLIFSPWVGFNCRYHPTCSAYALEALEKH GAIKGGWLAFRRILRCHPWGRSGIDNVPD" gene complement(79860..80399) /locus_tag="SKA53_00420" CDS complement(79860..80399) /locus_tag="SKA53_00420" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLITLATLMLLAACTGKPSFDDPALSDRQLNLEEFFDGDLVAH GQFQDILGTVRRSFVVTIAGDWDCERLRLVEDFTYEDGATEQRIWTLVKTGDDTWDGT APGVIGTATGLEQGDRFNWQYEIDLPVPSADGTAETLRVTFDDWMWLLADDRLLNLAY VKRFGFDIGTVTISFEKLD" gene 80487..81338 /locus_tag="SKA53_00425" CDS 80487..81338 /locus_tag="SKA53_00425" /note="COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9912" /translation="MLDETEIHPLFEGAPTTTEFKKLRKRIVRQTREAITQYGMIERR SDGTVPKWLVCLSGGKDSYTLLAVLYELKWRGLLPVDLLACNLDQGQPGFPATVLPEF LARMGVPHRIEYQDTYSIVMDKVPAGRTFCALCSRLRRGNLYRVAREEGCSAVVLGHH RDDILETFFMNLFHGGRLATMPPKLVNEEGDLFLYRPLAHVAEVDCEKFAQAMQYPII PCDLCGSQDGLQRQQVKQILDGWERNSPGRRQVMFRSLMNARPSHLLDPKLFDFAALT LDAPHKD" gene 81500..82408 /locus_tag="SKA53_00430" CDS 81500..82408 /locus_tag="SKA53_00430" /note="COG1940 Transcriptional regulator/sugar kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11648" /translation="MMALGVDLGGTKIEAQVFADDWHLHERRRVATPASYPALVHALV DLVGWADGLADGPVSVGIGAAGMINPRNGRVLAANLAAHDKPLPADLVAALGRPVRYL NDSHALALSEAVFGAGQPFASVFALVLGTGVGGGHVRDGRLQTGFSGTGGEVGHLPAP AHLVQAHGLPVVDCACGRRGCIETLISGAGLARMAHAMTGETLSAPQIIAARGDDPRM AQLWQVWCALTADLVQTLMRTLDPDCIVLGGGLSDIPVVVDDLTRAVGQAGFAGFDSP VILRAAGGAASGARGAAYAGWQVADG" gene 82401..83537 /locus_tag="SKA53_00435" CDS 82401..83537 /locus_tag="SKA53_00435" /note="COG1820 N-acetylglucosamine-6-phosphate deacetylase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11530" /translation="MAEGWIIPTQVFDNGTLQSGLAVQVVDGRTTDLRAVAAVPPDAP RQAVPGVLTPGFVDLQVNGGGGVLLNHTPTCAGLMRIATAHRAFGTVAVMPTFITDAP EGLAKAAQAVIALQALGGQGALHIEGPHIAAARRGTHAANHIRPLDDITWQILFKLRA AGVTVMITLAPEMVPVDQIAALVRLGVIVSLGHSDATAEQANAAFAAGARSVTHLYNA MSQMQGRAPGLVGAAINSNAYVGVICDGVHVRDDMVALACRARPVAGRMVLVSDAMPT VGGPDHFDLYGQRIQLRDGRLVNAEGNLAGAHSTMLWGLQRLVGQVGLGLEQALHMAI SAPAALLDKPHLGRITGRFAADLFALDDGLALQPLSENIGHDIA" gene 83610..84218 /locus_tag="SKA53_00440" CDS 83610..84218 /locus_tag="SKA53_00440" /note="COG2834 Outer membrane lipoprotein-sorting protein" /codon_start=1 /transl_table=11 /product="Putative outer membrane lipoprotein carrier protein" /db_xref="CDD:12187" /translation="MKTRIIPFLVAFAMSVHGVGVSAQQLSLPQISDYLNQLQTAQGG FTQVNGDGTLSTGQIYIKRPGRIRFEYNPPQESLVMAGGGQLAIFDPRSNTGPDRYPL SQTPLNVILQRNVDLTAARMVTGSVSDGTITTVTVQDPDNPQYGDIQLVFTANPVELR QWIITDDLGNQTTMVLNDLTTGAPIGDIMFNIAAEMRRRGFE" gene complement(84280..84837) /locus_tag="SKA53_00445" CDS complement(84280..84837) /locus_tag="SKA53_00445" /note="COG4764 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13902" /translation="MVFLGSCGGSGNFSAPRNLDDACSIARERPHYFRAFQAAERKYG VPVPTMMAMVYQESKFIGDIRPPHTYALGVIPIGRQSSALGYSQALDGTWREYQRDVG RSRAQRDDIRDATDFMGWYMTKTVEQTGVPLYDTRNQYLAYHDGRQGYLRGTWRSKGW LIRIASEVDSRAVMYDAQLRSCRRR" gene 85066..85392 /locus_tag="SKA53_00450" CDS 85066..85392 /locus_tag="SKA53_00450" /note="COG3785 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13105" /translation="MLKKQAKYHLGQIVRHRKHPFRGVIFDVDAMFANTDEWYNAIPE DSRPLKDQPYYHLLAENEQSFYVAYVSEQNLVADHSGEPVDHPDLDDMFGPFENGHYP HQLQLN" gene 85464..86234 /locus_tag="SKA53_00455" CDS 85464..86234 /locus_tag="SKA53_00455" /note="COG3022 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:8810" /translation="MLVVISPAKSLDMTPVQIPASAPAFQDDALRLAKTARGLSLGEL KSLMTISDDLARLNRDRFAAFAADPAPEAVKPAALAFNGDTYQGLEAKTLSIDDLHWA QDHLGILSGLYGLLRPLDAIQPYRLEMGSKLKTRRGASLYDYWGDTIAKALNARAADV GADTLVNCASQEYFGAVDRKALKLRVITPSFMEVKDDKPRIVSFFAKRARGAMARFIV ENRLTDAEAIKDFTSGGYAYDADLSDGDTWVFVRDYPA" gene complement(86231..87406) /locus_tag="SKA53_00460" CDS complement(86231..87406) /locus_tag="SKA53_00460" /note="COG0183 Acetyl-CoA acetyltransferase" /codon_start=1 /transl_table=11 /product="beta-ketothiolase" /db_xref="CDD:27979" /translation="MTDIVILGGARTAIGTFGGALAGTTPIDLGTVVAKAALQRSGVA AAQIGHVAFGHVINTEPKDMYLSRVAAMQAGIPDSVPAMNVNRLCGSGVQAIISVVQS LMLGDADFGLAGGAENMSRSPFIIPDQRWGAKMGDIRTQDMMLGALNCPFGTGHMGIT AENVAREHGISRAEQDAFALQSQDRVAAAIAAGYFDSQITPVQVRVKRDMVDFIRDEH PKATTPQALAALRPVFEKDGSVTAGNASGLNDGAAAIVLARADAAQAAGLTPRFRILG YAHAGVRPEVMGIGPVPAVRRLLEKTGLAAADFDVIESNEAFAAQALAVSKELGFDPA RVNPNGGAVALGHPVGATGAIITVKAMYELDRTGGKRALITMCIGGGQGIALAIERV" gene 87536..88195 /locus_tag="SKA53_00465" CDS 87536..88195 /locus_tag="SKA53_00465" /note="COG1136 ABC-type antimicrobial peptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATPase subunit" /db_xref="CDD:10856" /translation="MTLLIVDTLTKTYATADGPFPVLRGVSLTLEAGESLALTGESGS GKSTLLHLIGGLDRADAGRIMLDGQDIARLDDAGRAALRRGTVGVVFQQFNLIPSLKI ADNIAFQARLAGRHDAAWCATLADRMGLTDHLRKYPEQLSGGQQQRVAIARTLAARPK LVLADEPTGNLDETTAATVMDLMLALVAETGAGLLMVTHSLVLAARLQRRLHLRAGQV A" gene 88192..90573 /locus_tag="SKA53_00470" CDS 88192..90573 /locus_tag="SKA53_00470" /note="COG0577 ABC-type antimicrobial peptide transport system, permease component" /codon_start=1 /transl_table=11 /product="permease, putative" /db_xref="CDD:25940" /translation="MTRAAFAALLSHWVRNPVQLFTLLAGLALATGLWSGVQAINAEA RASYDAAASTLDEGRYDRLVARDGAAFGQDVFVMLRRAGWLVSPMLTGDLDGVRLIGI DALTAPAGMGPVNLGGDVDLAGFLTGGDQVFANAATAPRLGAVTVLITPDLADDTAVA DIGTVQRLLGRAGRIDSLLVLPDQPRNLPPLARIAPDLTLQPAQGSTDIAGLTDSFHL NLTAFGLLSFAVGIFIVHGAIGLAFEQRRGMVRTLRALGLPLNRLIGLMLAELLVFAL VAGVIGVALGYVIAALLLPDVAATLRGLYGADVSGNLQLRPSWWASGLGIAFAGTLLA GGSALWGIARMPLLAAAQPRALAMAAGRRASFQLGAALVLLAVAIVLGFNADGLVTGF ALLGTLLIGAALALPPVLNGMLAFASGRARSVTAQWFWADTRQQLPGLSLALMALMLA IVANIGVSTMVSSFRLTFTGFLDQRLASELYISTDSAEQTAALVAFAEGAGAAVLPIQ SADLQIAGQPAEVFGTRDHATYRDNWRFLQSTPDAWDTTFAGQAVVINEQLARRGALG LGDMVTIGSLTLPVEGIYGDYGNPIGQVVLALDAFAQEFPAVEPRRFGLRVAGDPADF VAGLTAATGIGAGQTIDQAEIKALSLAIFERTFTVTTALNILTLAVAGFAILMSLLTL AAMRVPQLAPAWAMGMTRAALGRLELLRAVMLAVLTAALALPLGLALAWVLLAVVNVA AFGWQLPMYLFPLDYARLGGFALLAAVLAAGWPAWRLARTPPGDLLKVFANER" gene 90563..91588 /locus_tag="SKA53_00475" CDS 90563..91588 /locus_tag="SKA53_00475" /note="COG5621 Predicted secreted hydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14705" /translation="MNAKALILCLLPVTSLAQGFAGLGTEVDGFSTPAPDPVFDFPAD HGAHPDYRIEWWYLTANLEDADGTPYGLQWTLFRSALAPYEADGWDSPQLWMGHAAVT TETAHFVAERLARGGIGQAGVVADPFSAWIDDSALEGDWRTLQMRATGSDFSYDMALS ATGPLVFHGDGGYSVKSAAGQASYYYSQPFFDISGTLNLPTGDVQVTGSAWLDREWSS QPLADNQTGWDWFSLSFDDGAKLMGFRLQQTDGMHYTSATWITAEGETTPYADGALQV EPLLTNAAGVPVHWRLTLPARGVDVTVQAVNDDAWMTTSVPYWEGPVTFAGTHQGRGY LEMTGYD" gene 91581..92138 /locus_tag="SKA53_00480" CDS 91581..92138 /locus_tag="SKA53_00480" /note="COG0259 Pyridoxamine-phosphate oxidase" /codon_start=1 /transl_table=11 /product="Pyridoxamine 5'-phosphate oxidase-related, FMN-binding" /db_xref="CDD:25718" /translation="MTDWFTTLDGLRTRAWGMLARGVADARHPCRLPTVCTTSPDGWP EARTMVLRSADQGAAVVTLHTDLQSGKLASLQVNPRVALHVWLRPQALQIRLQAEVTV QSGPDVRPLWDKIPDHAQQSYGVTPPPGAPIGAALEYVKQPDPATFAVLSCRVMQIDL VHLGDQHRRAAYSRSDDWAGQWLSP" gene 92163..94259 /locus_tag="SKA53_00485" CDS 92163..94259 /locus_tag="SKA53_00485" /note="COG1252 NADH dehydrogenase, FAD-containing subunit" /codon_start=1 /transl_table=11 /product="selenide,water dikinase, putative" /db_xref="CDD:10969" /translation="MDKYPFTRDLVLIGGGHTHALVLRKWGMNPLAGVRVSVINPGPT AAYSGMLPGFVAGHYSRDDLDIDLVKLARFAGARMINGAVTGIDRTARTVTVPGRPPI GYDVLSIDVGITSQMPALDGFAAYGTPAKPLGAFAQAWDDYRARAKAPKIAVIGGGVA GAELALAMAHALQGKSPKLHLIDRGRALAALGDKARQKMLVALAGYGVEIIENAEVTQ VFREGVLLRDGRLIHSDFTTGAAGAKPHDWIAGTELDLQDGFISVTAQLQTSDRAVFA VGDCAHMAASPRPKAGVYAVRQAPVLFDNLRAILSGGRLRDYKPQRDYLKLISLGQKS ALAEKFGTVWQGPLLWRLKDRIDAKFMARLDDLPVMPPPQLPKIAAIGLRAALGDKPM CGGCGAKVGRAALQQVLGDAFGDDAGLVQTGQVITTDHLRALVADPVLMTRIAAIHAL GDIWAMGATPQAATVQIILPRMESALQQRTMAEITATTTAVMSEAGARIAGGHSALGD ELTIGFTITGLVDRPITQAGARAGDALILTKPIGSGTIMAGDMAGQARGADVIACLDL MVQSQAKAAAILHAAHAMTDVTGFGLLGHLRGICDASGTGAVLDWAQVPVMAGAAVLS ARGVRSTLFADNQAGAGVVEGAVPDLAYDPQTAGGLLAAVAGHSADDLLGALTRAGYT AAIIGQITDGSAISLR" gene complement(94246..95298) /locus_tag="SKA53_00490" CDS complement(94246..95298) /locus_tag="SKA53_00490" /note="COG2603 Predicted ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27919" /translation="MPIAFATLDDLIKHGFDTVIDVRSPAEFALDHVPGAINLPALSN DERARVGTIYKQISPFEARKLGASLVARNVADHIAQAMADKDGSWRPLVYCWRGGQRS GSFASILGQIGWRTDTVQGGYQTFRRLVQGAVYDRPVPHRVILLDGNTGTAKTALLAR LAAKGVQVIDLEAMANHRGSLLGGAAQGQPSQRAFETQIALALYRLDPARPVLIEAES SKIGSLVIPPSLWAAMTAAQRITLHAPLAARASFLARAYADIAADPDDMARRLAPLRY IRGHQVVDGWMALLHAGDLTGFATALMDQHYDPAYAKSRKIAAHDMLADLHSDTLDDA GQDRLVAAILPLVNAG" gene complement(95355..96296) /locus_tag="SKA53_00495" CDS complement(95355..96296) /locus_tag="SKA53_00495" /note="COG2017 Galactose mutarotase and related enzymes" /codon_start=1 /transl_table=11 /product="putative aldose 1-epimerase protein" /db_xref="CDD:25723" /translation="MQIFGTTTRGETVHAIPLRAGDLTLTLLTYGARIQDLRLAGIDH GLTVGSDDLADYEGAMLYHGAIVGPVANRITTARVRLDGMMYELERNNGQAHLHSGSE GSHAQVWDVIETTAASATLSLDMPDGFAGLPGRRRVTAQFTLSAPATLTLTLTATSDG TTLMNFANHSYWNLDGSGTWQGHSLRIAADHYLPIDDAICPTGDVADVTGTGMDLRHG PVLDAQTPPLDHNFCLSDGEEPLRDVLWLTGQGGVRMVMATTLPGMQVFDGRPDHDAL AIEAQHWPDAPNHTHFPQIKLPAGATYQQITRWSFAR" gene complement(96296..98197) /locus_tag="SKA53_00500" CDS complement(96296..98197) /locus_tag="SKA53_00500" /note="COG1874 Beta-galactosidase" /codon_start=1 /transl_table=11 /product="putative beta-galactosidase protein" /db_xref="CDD:11583" /translation="MHRTLGICYYPEHWPQDQWTEDAAHMVAAGLSWVRIGEFAWARM EAVPGTLTWDWLDRAIDVLGTAGLKVVLGTPTATPPRWMLDKYPDMLAVDAQARARKF GSRRHYDFSHPGYRNECRRIARLMGERYGANPYVAAWQIDNEYDCHDTTLSYSDAARR GFQDWLAHRYQSPAALNRAWGNVFWSMDYDSFAQIDLPNLTVTEPNPAHVLAFRRYSS DQVVAFNKVQADELRRHTSAPLIHNYMGRITTFDHWKVGDDLDIASWDSYPIGFLSDR LEGTAKEKATFLRQGHPDMQAFHHDLYRAVGKGRLWVMEQQPGPVNWAPYNPAPLPGM ARLWAWEAFAHGAETVCYFRWRQAPFAQEQNHAGLLRPDSRPAPALAECRQVADEIAK LPDVGTATAQAALVFDYASAWAWDTQPQGADFDAFRLAFAAYRALRRAGLNIDILPPD CADLSGYKLVLAPGLMKISDPLRAALARFDGIALIGPRSDTKTDELSIPTPLGPDLPD TDLSVVLTESIPPDAKIKLQGGGIFRHWFEHLEGTAPVHLSTKSGQPAIMGGDHLRYL AGWPDDATFDAIIGGLCDALDLPSFQLAEGLRIRDTATHRFVFNYAPRAQAWGGTIVP AAGVHWEAL" gene complement(98238..99059) /locus_tag="SKA53_00505" CDS complement(98238..99059) /locus_tag="SKA53_00505" /note="COG3386 Gluconolactonase" /codon_start=1 /transl_table=11 /product="Smp-30/Cgr1 family protein" /db_xref="CDD:8713" /translation="MIFDDTQCALGEGPLWHPLRGELFWFDILGKRLQSKARQWQFDE YVSAAGWVNADILLIASQTALIRFDLRDGSQTPLCPLEADSPHTRSNDGRADPQGGFW IGTMGINAEPGAGAIYRYFKGELRQLFAPVTISNAICFAPDGKTAYFTDTPTQKIMRV ALDADGWPQGDPVLHIDLRATDLRPDGAVVDAQGNLWNAQWGAGRVAGYAPDGTFIDS YSFAATQTSCPAFGGDDLSTLFCTSAATGLDGPDQGRTYATPTPYKGQAEHQVLL" gene complement(99056..99661) /locus_tag="SKA53_00510" CDS complement(99056..99661) /locus_tag="SKA53_00510" /EC_number="4.1.2.14" /note="COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase" /codon_start=1 /transl_table=11 /product="keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase" /db_xref="CDD:10668" /translation="MHRPLIAILRGITPPEAEAVTAALIAAGITKIEVPLNSPEPFDS IGRMARAFGDDALIGAGTVLSTADVGRVAQAGGRLIVSPNCDPRVIVATKTAGLQSWP GVMTPTECFAALKAGADGLKIFPASLIGPDGIKAIRAVLPKDTQVYAVGGASTSNFAT WIAASADGFGIGTALYQPGLTPAEVSTRAHDIVAAYDKAAG" gene complement(99664..100566) /locus_tag="SKA53_00515" CDS complement(99664..100566) /locus_tag="SKA53_00515" /note="COG3734 2-keto-3-deoxy-galactonokinase" /codon_start=1 /transl_table=11 /product="putative 2-dehydro-3-deoxygalactonokinase" /db_xref="CDD:16330" /translation="MTATITPAWIGVDWGTSHVRAWAISASGTLLAQASSDRGMGRLD RAGFEPALLALVGPWLHGPTPVIACGMVGSRQGWVEAPYAATPCAPLGGPLAPACSDD PRLAVHVIPGIKQLHPADVMRGEETQIAGYLAQNKGWDGVICLPGTHTKWVHVSAGEI VSFQTFMTGELFATLTTQTVLRHSIATDGWDDAAFDTGLADAYGRPEKLAGRLFSLRA EGLLHDLPGATARARLSGLLIGAELAAAKPYWLGQQIAVIGAGALARLYVTALAQHGA PATQVNAEAATLAGLTAAYRQLKG" gene complement(100563..101321) /locus_tag="SKA53_00520" CDS complement(100563..101321) /locus_tag="SKA53_00520" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="Short-chain dehydrogenase/reductase SDR" /db_xref="CDD:25396" /translation="MTATFHDLTGASVFITGGGNGIGAALTDGFLTQGAKVAFVGRSD ASAFVDQMAAKHANRPLFIPCDITDTDALQDAIAKAADAHGPLKALVNNAANDARHEA ATITPAYWDEMQAVNLKAYFFACQKAATVMAPQGAMINFSSISYLFGAAGMIGYTTAN AGITGMTRSLAREWGPRGIRVNAIAPGWVFTEKQETMWATPKTKAAFLERQCLPEPIM PADMVGPVLFLASDASRMMTGQVMVVDAGVVTTG" gene complement(101318..103402) /locus_tag="SKA53_00525" CDS complement(101318..103402) /locus_tag="SKA53_00525" /note="COG3345 Alpha-galactosidase" /codon_start=1 /transl_table=11 /product="alpha-galactosidase" /db_xref="CDD:12679" /translation="MTHTYRIDTGRQTLVLAARNTRLPQVVYWGAPLPADEDLAMLHA AHAIDITGGMLDENPDLSLCPEASRSFPGQPGLILRDAGGAPVLAMFSLVDAVQTATD LRLTYRDADNGLDLICTFLSDPETHIITCQTALNAEYPVYLDWLAAPVLPAPQHSETM IDISGRWCGEFQLAHTPWSAGIRLRESRTGRSGHEHFPGLIVPCHGATNTQGEAYAFH YGWSGGHRMIAEELADGRRQIQWGHAAGSDTQAATHFSTAPLYINYSDSGLNGCAVAF QRHLRDRIVTWPKPDTPRPVHYNCWEAVYFDHKLPVLKDIATRAAALGAERFVLDDGW FGRRDDDTTSLSDWIVDARKYPQGLQPLIAHIHGLGMTFGLWFEPEMINEDSDTYRTH PGWVLGRADQTRGRQQLVLNMALPAVREYLYGRIAAILTDHPIDYIKWDHNRVLPMPD AAQTRGTYALLDRLRVDFPAVEIESCASGGGRIDFGILQRTQRVWLSDSNDALERLRI QHDAALFLPMAVTGSHVGPRICHTSGRTLDMSLRAWVAAQRHMGFEMDPRELTDHEAA VLSKVTGWWKQNRHWLHSADILRLDSADPAVIAEQQLARDKARFVVFAGKAATSTQIV PRPLRLTGLDGQARYRVTLVNRDEAPGLSRGAPLLKSGSLVASGTYLMQHGVTLPWSF PDRIWVLQGESL" gene complement(103410..104258) /locus_tag="SKA53_00530" CDS complement(103410..104258) /locus_tag="SKA53_00530" /note="COG0395 ABC-type sugar transport system, permease component" /codon_start=1 /transl_table=11 /product="putative ABC transporter system permease" /db_xref="CDD:10269" /translation="MFPTPVQKSSPTVRLSYQAFLPVALILWLLPLIAVMIFSIKPDV DFTSGNYWGWPSSFEGFTNYGLVFFESAMPRYLLNSVMITVPTVIGTVALACMTGFAL GVYKFKGNLLIFFMFIAGNFVPFQILMVPVRDLTVDMGLYNTKTGLVLFHIAFQTGFA TLFMRNFIRALPFALIEAARVEGVAEWRIFWYVVLPLMKPAIAAMAVLIFTFIWNDYF WAVVLTQGPESQPVTAGITSFNAQYRAAYHLMSAGSIVAALPPVLMFFLMQKHFIAGL TLGAVK" gene complement(104358..>105331) /locus_tag="SKA53_00535" CDS complement(104358..>105331) /locus_tag="SKA53_00535" /note="COG1175 ABC-type sugar transport systems, permease components" /codon_start=3 /transl_table=11 /product="ABC transporter, permease protein" /db_xref="CDD:10893" /translation="QTGRRMSISADSDRQPPRGWYKRNEIAITPWLFLAPGVLFFVVY VIAPIWQSFGMSLYDWNGLGDIDTNGTYVGLENYNKLFGLNGERADRNFQISLWNNLR WLVLYLLAIPLGLFIALFLNQNVRGIRLYKSLFFFPFVISQVVVGLVFSWFYLPNNGL FTIVTGWFGFEISGGVLGNPNTATYGIIVAGLWPQTAYCMILYLTGLNAVDPEQVEAA RLDGAKGRKMLWHVILPQLKPATFIAFVVTIIGALRSFDLVSIMTGGGPFGSTRVLSF YVFEKSLSERGLQYGYAAAVAVVLFLIMLVFISYFLWTMYQDEKEAR" gene <105432..105511 /locus_tag="SKA53_00544" CDS <105432..105511 /locus_tag="SKA53_00544" /codon_start=3 /transl_table=11 /product="hypothetical protein" /translation="YLLAIPLGLFIALFLNQNVRGMKAV" gene 105561..105704 /locus_tag="SKA53_00549" CDS 105561..105704 /locus_tag="SKA53_00549" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFSWFYLPNNGLFTIVTGWFGFEISGGVLGTNTGGMRITAHPLG EDQ" gene complement(105698..106957) /locus_tag="SKA53_00554" CDS complement(105698..106957) /locus_tag="SKA53_00554" /note="COG1653 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter, substrate-binding protein" /db_xref="CDD:11364" /translation="MRSILKTSFAAFVAAGIAASAMPANAQSLSGDLVIFSDMSNPAP RAVMEGMVARFGEMHPDLNIELTVIDREAYKTQIRNFLTANAPDVANWYAANRMLPYV EAGLFEDVSDIWDGSMSEELGSTKGALTVGDAQYGVPYTYYQWGVYYRKDIFDQFGLT EPTTWQEELANCQTLIDNGIKCYTIGTKFLWTAGGWFDYLNMRTNGYDFHARLTNGEE SWTSDEVRATFENWRTLIDMGAFIDDHQNYSWQEALPFMVNGEAASYLMGNFAVAPLR EAGLTDNQLDFYQFVEITPGIPKGEDAPTDTFHIPSAAQNKEAAREFLRFVVSAENQT LINNGANLGQLPVNALSSVDEDKFLQQGFQMLSSGAPGGIAQFFDRDAPAEMAAAGME GFQEFMVFPDNLDDILERLEATRQDVY" gene 107115..107909 /locus_tag="SKA53_00559" CDS 107115..107909 /locus_tag="SKA53_00559" /note="COG1414 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11129" /translation="MTSDGTVGKALEVLDQVAAYGRPVRFSELLAASPFPKPTLYRFL QTLTNQRMLAYDPDRQTYSPGVRLVRLAHAAWEQSTLAPIARPHIDALSAAVGETVHL AQLDHAQVLYIDKRNANKPVQMFSQAGKVGPAYCTGVGKVMLAFCDPAVIAAVIEQQS FHRFTAATLTTPAALRTELSAIRANGYGFDREEHEPGIICIAMPILSDGGRVLGALSV TSTTSRTNLAGLESYVPILQDTASKIARDAQSWSFPDHDAKEPTGR" gene 107913..108974 /locus_tag="SKA53_00564" CDS 107913..108974 /locus_tag="SKA53_00564" /note="COG3839 ABC-type sugar transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13156" /translation="MSGVTLKNVVKRYGDVQVIHGIDLAIGDGEFCVFVGPSGCGKST LLRMVAGLEETTEGSMSIGERDVTRLDPSQRGVAMVFQTYALYPHMTVRENMGFGLKM NGHPKKVIAEKVAEATRILKLEPYLDRKPAALSGGQRQRVSIGRAIVRGPEVFLFDEP LSNLDAELRVEMRVEIARLHREIGATMIYVTHDQVEAMTLADKIVVLRAGRIEQVGAP MELYRDPDNKFVAGFIGSPAMNFLGGTAKDGTVTVPGMKADFAGVIPASYSGAVTLGM RAEHLAVDPAGDTHTVDLTESLGGVSFVYLTSDTGERIVIEERGDDRSVEGARVGVTI DKSRLYLFDAQTEVRIRNG" gene 109005..110216 /locus_tag="SKA53_00569" CDS 109005..110216 /locus_tag="SKA53_00569" /EC_number="4.3.1.19" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="threonine dehydratase" /db_xref="CDD:10889" /translation="MTLTAALIAQTYAAIAPATIRTPLIRATRLSHLLGIDLYLKLEN LQHTNAFKARGALAKLLTLDAAARKAGVIACSAGNHAQGVAYHATRLGIPSTIVMPEG TPFNKVQRTADLGAEVVIHGAGFDDSVQFTLDLAAQKGMTFIHPFDDPVVAAGQGTVA LEMLEQMPDLDCIVVPVGGGGLIAGMAVAAKSVKSAITIIGAQAHLFDAAKAQIEGVA PHFAGATLAEGIAVRQPAPANIAVIRTHVASIDSASESEIESAVFDLLSHEKLVAEGA AGAGLAVIKANLARFAGQKVGLVICGGNIDSRLLSTLILRGLMRDGRITRLVFEIDDR PGQLAMISRIIGDAGANVIEVIHQRMMQSVSLKKAELEIVIEARDQRHVDDITGLLRD AGLSVRTAQDL" gene complement(110285..111157) /locus_tag="SKA53_00574" CDS complement(110285..111157) /locus_tag="SKA53_00574" /note="COG3302 DMSO reductase anchor subunit" /codon_start=1 /transl_table=11 /product="dimethyl sulfoxide reductase, C subunit, putative" /db_xref="CDD:16271" /translation="MHPASSVIIFTTFSGLGFGLLFWLGIGAITPTGLMALIWFAIAY LAAVGGLLASTFHLGRPERAIKAFSQWQTSWLSREGICAVATLLIMAAYGAGLVFFDT VLAPLGWLGAAGALATVFTTAMIYAQLKTVPRWRHWSTPALFLALSVGGGALLGGQVT EALVLLGLAAALQVYTWVTGDTRLARSGTDMASATGLGHIGTVRAFEPPHTGTNYLMR EFIHVVGRKHAQRLRIIAVALAFVLPIIFLLVPFSHIWGALALVSHIAGVLVLRWLFF AQAEHVVGLYYGKR" gene complement(111157..111918) /locus_tag="SKA53_00579" CDS complement(111157..111918) /locus_tag="SKA53_00579" /note="COG0437 Fe-S-cluster-containing hydrogenase components 1" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster-binding protein" /db_xref="CDD:10311" /translation="MTQLPASTAKKLGLVIDLDTCVGCHACVISCKGWNTENYGAPLS DQNAYGADPSGTFLNRVHSYEVQPEVGTAQLIHFPKSCLHCEDAPCVTVCPTGASYKR VEDGIVLVNEADCIGCSLCAWACPYGARELDAKAGVMKKCTLCVDRIYNENLPEEDRV PACVRTCPSGARHFGDLGDVDSDVSQLVAARGGFDLMPEQGTKPVNKYLPPRPKDVMP EYDVLAPFLEPVATDGKGFAHWLDKALSALPGGAK" gene complement(112017..112142) /locus_tag="SKA53_00584" CDS complement(112017..112142) /locus_tag="SKA53_00584" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDVAQMTKGQIILLIIAFVTITLGSFIWFIATWDPAMRVPV" gene complement(112124..114949) /locus_tag="SKA53_00589" CDS complement(112124..114949) /locus_tag="SKA53_00589" /note="COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing" /codon_start=1 /transl_table=11 /product="oxidoreductase, molybdopterin-binding" /db_xref="CDD:28633" /translation="MSLDQPQLDTSPHVSDELRKTTCYMCACRCGINVHMKDGKVAYI EGNRDHPVNKGVLCAKGSAGIMQHNAPSRLRAPLRRVGERGSGEFEEISWEEALQTAT DWLAPIRANHPEKLAFFTGRDQSQSFTSFWAQGFGTPNYAAHGGFCSVNMAAAGIYTM GGAFWEFGQPDWDHTKLFMLFGVAEDHDSNPIKMGIGKIKARGARIIGVNPIRTGYNA VADDWVGITPGTDGLFILALVHCLMSAGKVDLDYLAQFTNASVLVNEDPKSDQFGLFL RDAAGQPQVIDRRTGQLAPWNGQGVEPDLAATHRAAGITHRPVFHQMADRYLDPAYAP EAVADRCGISAQRIRALAADLARVAFDEPVILDRAWTDFRGKKHAQMVGRPVSFHAMR GISAHSNGFQTCRALHMLQIILGAVETPGGMRFKPPYPKPATAHPKPHGKVTAGAALD GPHLGYVQGPEDLLLHDDGTPIRIDKAFSWDNPMSAHGLMHMVISNAHAGDPYKIDTL FMYMANMSWNSSMNVGGVHKMLTDKDENGDYVIPRIIYSDAYSSEMVAYADLILPDTT YLERHDCISLLDRPICEADGVADAIRWPVVEPDRDVRGFQSVLCDLGARLGLPGFVND DGSAKYKDYADYITTHIRRPGIGPLAGFRGADGQDEGRGTANPDQLQSYIDNGGFWIS HVPENCAYYKPFSTEYQDWAVKMGFYDVVQPYIFQLYVEPLRKFQAAAEGRGHRQPPD HLRGQIKATMDPLPIWYPPFEDGHVDPAEYPIHALTQRPMAMYHSWGSQNAWLRQIHG HNPLYLPTKIWDQHGFQDGDWARVSSAHGAITVPVAHQAGLNENTIWTWNAIGKRKGA WALDETAPEATKGFLLNHLIHELLPPRGDGLRWANSDPVTGQAAWFDLRVKIEKSGLP NEAQPVMPALKSPVPPAPKNLAWMSRK" gene complement(114970..115158) /locus_tag="SKA53_00594" CDS complement(114970..115158) /locus_tag="SKA53_00594" /note="COG0282 Acetate kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10156" /translation="MKGAVQTGSAMATTGGIDENAGEIRSRIMDHLAFLDKVPLHVIP ADEEKQIARDALTLLAQY" gene complement(115155..115904) /locus_tag="SKA53_00599" CDS complement(115155..115904) /locus_tag="SKA53_00599" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIMPFDLGPGTAILLGFALLGAAFVRGYSGFGFSAIFIAFAALL TNPLPFIPVVFACEIMMTAFQARGIRAHVDWHRVGWLIVGAAIALPFSVSVMLSVGED TARIAISGVIVLMALLLLSGWTLQRRIGALGHGSVGVLSGMCNSAGIGGLPVAAFLSA QPVQAAGFRATMIVYLTALDLITLPLLWLGGLVTWDTVIAALMAFPILGLGVWLGGRR FLAASPAAFRQSAVLLLLMLSALGLIRAMVT" gene complement(115901..117367) /locus_tag="SKA53_00604" CDS complement(115901..117367) /locus_tag="SKA53_00604" /note="COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /db_xref="CDD:10886" /translation="MSISIETFFLDPSAVGTLQARIQQMVAQGILAGRFRPGERLPSS RMMAQHLGVSRITVTLAYTELVADDYLTARGRSGYYVSDNAPEPPAFAMQQTQTGTVD WTRAIGQRFTPALSIEKPTDWANYRYPFIYGQADRTLFDTANWRLCALRALGMRDFGA LTADYYDGDDPELVDFISRQTLPRRGILANPDEILITMGAQNALWLSAQVLLNSRRRA AIEDPCYPAMRNILMQSRCQLSIVPVDQDGLPPDALSDDIDVLFSTPSHQCPTAATMP LDRRKALIAKGEAQDFIIVEDDYEFEMSFLKPPSPSLKSLDPHGRVIYVGSFSKSLFP GLRLGYLVGPAPFIKEARALRATVLRHPPGHIQRTVSYYLSLGHYDALIRRMSRAYHD RRQVLDAALQDSGLVVAGQGQSGGSSVWVRTPDGTDTTPLAQSLRAKGVLVEPGARFF AGDAPPTEYMRLAYSSIPASRITEGVRLIAAALTKNAA" gene complement(117428..119014) /locus_tag="SKA53_00609" CDS complement(117428..119014) /locus_tag="SKA53_00609" /note="COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /codon_start=1 /transl_table=11 /product="taurine--pyruvate aminotransferase" /db_xref="CDD:10036" /translation="MISATCNGKPDFRIRTSPVYMRKSGIMFACHLALLIMVQDGSQW DAMHKPADRIRRPPKSFFKTEPPDMDTLNFANDPGHVIEADRAHVWHHISQHKAYETI DPRIIVEGRGLRVWDIKGKEHVDAVSGGVWTVNIGYGRERMGRAISDAVTKMCFFGGA LGTIPGAQFAEMLIEKMPGLDRVYYANSGSEANEKAFKMVRQISHKHYGGKKSKILYR ERDYHGTTIANLSAGGQDERNAQYGPFVPGFIRVPHCLEYRSQDGTLGEEYAANAAKA IEDVILAEGADTIGALCLEPITAGGGIIVPPSGYWQRVQELCRKYDILLHIDEVVCGL GRTGAWFGYQQFGVQPDIVTMAKGVASGYAAISCCVTTNAVFEMFKDDTDKLSYFRDI STFGGCTAGPAAAIENMRIIEEEDLLGNSVAMGAHLSGNLHALMDKHKWIGDVRGMGL FQGAELVADRTTKEPMDEKKVQAIVADCMAQGVIIGATNRSLPGFNNTLLFAPSLIAT KDDLNQITEAVDQAITRVLG" gene 119023..119541 /locus_tag="SKA53_00614" CDS 119023..119541 /locus_tag="SKA53_00614" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMTVSALLILLPALIGFVVLLARHRKPTRPAAVIARHAIVVDGS NVMHWGGAPSAKVLARVLGALQTKGYTPIVFFDASVGYRLADRYLDAGDLAGLIGLPA AQIHVVDKGVIADSAILEFSALHGLRIVSNDQYRDWRVQFPHLHRKGAVLRGRFQDGA VVWQQRLKLVRA" gene complement(119521..119982) /locus_tag="SKA53_00619" CDS complement(119521..119982) /locus_tag="SKA53_00619" /note="COG0748 Putative heme iron utilization protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10616" /translation="MKREPVNPTDDAARVLVRQLLGDMRHAALAVIHPDTGAPYVARV GLIWHGTTALTLVSTLSTHTQALLAHPACAVLVGEPGAKGDPLTHPRLTLSAQAAQVD KPAHKDIWLAAVPKAKLYYDFTDFVMFRLAPTGIDLNGGFGKAYRLRADEL" gene complement(119979..120404) /locus_tag="SKA53_00624" CDS complement(119979..120404) /locus_tag="SKA53_00624" /note="COG0326 Molecular chaperone, HSP90 family" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit B" /translation="MKHLTCALFVLVTPAAAWEFSPAPICTLTDADGLITVTYDAALP EYSVTLTLPDGTWPDDPTFAMNFAGNRPIFIQTDRHRVSPDRRSLTVTDSGFGNVLDG LQFNLRAYATSGDSTLGLSLDGIGPAMAAFRACPAANLA" gene complement(120450..122696) /locus_tag="SKA53_00629" CDS complement(120450..122696) /locus_tag="SKA53_00629" /note="COG0556 Helicase subunit of the DNA excision repair complex" /codon_start=1 /transl_table=11 /product="UvrABC system protein B" /db_xref="CDD:10427" /translation="MTKDNNYRSIKGIPAMAYAQTDKSPPVYLANPAPDVKSREKMEG GRRFVLKTEFEPAGDQPTAIAELSAGILAGERDQVLLGATGTGKTFTMAKMIEQTQRP AIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEAYVARSDTYIEKESQINE QIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYGAMTQDIHAGQSYDQRQIIAD LIAQQYRRNDQAFQRGTFRVRGDSLEVWPAHLDDRAWKLSFFGEELESITEFDPLTGT KTGTFDKVRIYANSHYVTPKPTMQQAVIGIKKELRMRLDQLVAEGKLLEAQRLEQRTN FDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGG MYKGDFRRKMTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWEMEQTGGV FTEQIIRPTGLIDPMIEIRPVETQVDDLLDEVRKVAAAGYRTLVTTLTKRMSEDLTEY MHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDA DKEGFLRSETSLVQTIGRAARNAEGRVIMYADRITGSMERAMGETERRRTKQLAYNEK HGITPTTVKKNVEDILAGLYKGDVDMNRVTAKIDKGRAGGNIKTVIDGIRTDMRKAAE NLEFEEAARLRDELKRLEAVELAIADDPLARQQAVDKAVDDAAKASGRSTGGRGGMRG GKSRYAKK" gene 122745..123977 /locus_tag="SKA53_00634" CDS 122745..123977 /locus_tag="SKA53_00634" /note="COG2309 Leucyl aminopeptidase (aminopeptidase T)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:2596" /translation="MTMIDPVKLDRLAEVAVRTGVNLQKGQDLVITAPLSAIELVRAI TVHAYKAGAGIVMPFFTDEAITLARYEHAEDASFDRAPGWFYEGLAAAYKGGAARMAI TGDDPMLLADQDPAKVARLSKATSIAAKPAMAPIVGFEVNWNIVAFPGAGWAARVFPD LPVEQAQGKLMDAIYTASRLDGDDPVANWAAHTTELQKRVKWLNDHDFAALKYTGPGT DLMLGLADGHIWKGGASPALNGVVCQPNIPTEEVFTCPHAYKVDGVVSATKPLAHQGN VIENIKVRFEAGRIVEATATKGEAVLQALLNTDDGACRIGEVALVPHSSPISQSGTLF YNTLFDENASCHIALGQCYADTIEGGSEYSAEELQQKGGNQSLIHVDWMMGSDAVDID GITKTGEVIPVMRKGEWA" gene 124034..124360 /locus_tag="SKA53_00639" CDS 124034..124360 /locus_tag="SKA53_00639" /codon_start=1 /transl_table=11 /product="NADH-ubiquinone oxidoreductase family protein" /db_xref="CDD:16096" /translation="MKGPKMRARIYKPARTAMSSGIAKTRSWVLEHVAEAARSIDPLM GWTSSSDTQAQVRLYFDSKEAALDYAHENGIEAVVQDPKLRKPNIRAGGYGENFATNR RGAWTH" gene 124414..124487 /locus_tag="SKA53_t01096" tRNA 124414..124487 /locus_tag="SKA53_t01096" /product="tRNA-Arg" gene complement(125113..125328) /locus_tag="SKA53_00644" CDS complement(125113..125328) /locus_tag="SKA53_00644" /note="COG1055 Na+/H+ antiporter NhaD and related arsenite permeases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDFRQEQAKLTSWREILMTGSFASIINVSGTSYFYGFEIQSASA YFIGDLGGLLACMVILMLGFRWLRRTQ" gene complement(125680..125928) /locus_tag="SKA53_00649" CDS complement(125680..125928) /locus_tag="SKA53_00649" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLWQMEVEVGLETLPQPQKDVYYAACLVADDKQLVHSDVVKHQP ILALMSRPTFYRALKSLVEKNLLVHAGPHQDGRYFVKR" gene complement(127553..127777) /locus_tag="SKA53_00654" CDS complement(127553..127777) /locus_tag="SKA53_00654" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVMELSLKLYSFLAIRVLEPSVTQRSSTLMETVFLISLHLQHHM GGMLTRLAATGMELKAMLSITIKVEQGFSA" gene 129350..129607 /locus_tag="SKA53_00659" CDS 129350..129607 /locus_tag="SKA53_00659" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKQTGRCTRHGGKSTGPRTEEGRARIAAAQTTHGRLTKEARAEA TRWAQVGREIRAELRDIEREAIAGGLLAKDWREMFEPKPDK" gene complement(129819..131729) /locus_tag="SKA53_00664" CDS complement(129819..131729) /locus_tag="SKA53_00664" /note="COG5519 Superfamily II helicase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="DNA primase domain protein" /translation="MDDRTSLVAQLLADSEAARQTAEVAEAAVEAQRQYADFGGALHM FKVVKDKQPIPVRLCNFTAEIEREVVKADGLTTARHFTVSGRMETGNPLPTIDVPASE FDRLEWLATEWGASPQIFVGSRYRDHVAAAIKERSDPELVQLCQHTGWAKFDDELLYL TASGGIGTEGLNEEARCELQGSLADFSLPAPADPRTLGLADLLGAFRDVQKDGVGLVL LGGVMRATLCHFMPATLSIYLQGTTGTFKSAFAGVLQGFWGIKFDGANLPANWSSTGN ALEKTAFLAKDALLIVDDFVARGTRHEVAKTHANAERLLRAQGNQAGRSRMTSKAELR NAFHPRGIILATGEDIPNGHSLQARLVIVNVARGAIDTTVLSGLQKLARDGVLAKVMA SFVQWLAMESKRNALHEFIGMALEIDRENIGASGHARTQDNLANLLMGLRVFLDFADD AGEISSQVTQGFMDIAKDAACALADLQSAIDHEASDAQRFVDLMRAAVSSGKAHIERS SGGKPDNARALGWRDVDLGQSGTRTEAMGTRIGWVDGEELYLDPTASLSVIKALASGL DNHLGSSERAIAKSLREAGLLSRCDKSRNTTKVSVLGARRSVYVFRMADIFDLDSASA SPIGHGDADIPF" gene complement(131722..132603) /locus_tag="SKA53_00669" CDS complement(131722..132603) /locus_tag="SKA53_00669" /note="COG0554 Glycerol kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDFKNNSPQPHMSSTLAPQEEVALAAANWVKMGFPVEVRRNGLP TVDPRSPEQRKDPVATYFILCEISGLGLAVKTGPKTGLLAITASTSDENSGLNALRNA GFYCPQCDSPIRYDAIMDGKFEGGFHTMLYYVGKETFLRTALSELDGVVVEGSGEVIT IPPGICDYGLALGVSTKATYEGPETLAPVGIPYLPDGLRKMIRAAERQTLADKRKPNS RRGVLPELYAPVAEGGRNNALARRAGFLLGVRKLTEEQTLKALLDINQRCCQPPLDIC DVQSVVRSIAKRHQRHG" gene complement(132603..132797) /locus_tag="SKA53_00674" CDS complement(132603..132797) /locus_tag="SKA53_00674" /note="COG3311 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24803" /translation="MSTITRFIGRRELLNELGVSKTTILRWTAERGFPQPLPRSGQVP IYDLAKIEAWLLGVAEEEVR" gene complement(132986..134146) /locus_tag="SKA53_00679" CDS complement(132986..134146) /locus_tag="SKA53_00679" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="possible phage-related integrase" /db_xref="CDD:27722" /translation="MPKLSTVRLTDTFIRSLRPKDQRYDVFDASQPGFGVRVATSGAL SWVLLTRENGRRKRITLGGYPAISLSKAREAARLALSEIQEGTFGRKNAPATFETAVE EWYAREQRAKKSFRQVEQAMRLHVLPFLGRHQLDQIKKADLMRVIDRVAERGKLTQAN RVRAFITRFFNFAIERDLLMSSPAAALPRPAVEISRDRVLSRDELCAVWETAEQMGFP FGRITQLLILTAQRRDEVAGMRWSELDLDRARWIISKERAKNGKAHIVHLSPQALALL STIPRQNGVDLIFTTTGRSAVSGFSKAKAALDARSHVSDWRFHDLRRSAATFMAEELR ITPVVVDRILNHVSGTVRGVTAVYLRGEHLADREAALAAWGQLVENLVNSNK" gene 134745..134867 /locus_tag="SKA53_00684" CDS 134745..134867 /locus_tag="SKA53_00684" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTHIYGDLAENARFVAAFKTALRRIWADGMSAAIQNYLSR" gene complement(134928..135635) /locus_tag="SKA53_00689" CDS complement(134928..135635) /locus_tag="SKA53_00689" /note="COG1814 Uncharacterized membrane protein" /codon_start=1 /transl_table=11 /product="similar to nodulin 21" /db_xref="CDD:28436" /translation="MNMPYEPAHEEVHYINRAGWLRAAVLGANDGIVSISSLIVGVAA ATPEPTAIFVAGAAGLAAGAMSMAAGEYVSVSSQSDVERADIAREQQALIDTPAAEEA ELASIYESRGLTKKTAALVARELSEKDALGAHVRDELGLSEVHTANPLQAAIASGFTF TVAAALPLAAAILAPSDKILPTVVIATLICLAGLGALGAHIGGAPKPRATARVLFWGA AAMAITACVGALFEVSI" gene 135917..138202 /locus_tag="SKA53_00694" CDS 135917..138202 /locus_tag="SKA53_00694" /note="COG2838 Monomeric isocitrate dehydrogenase" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase, NADP-dependent" /db_xref="CDD:15587" /translation="MDGKGLNSPDSHLKDRNSPMTNNATPDIIYTKVDEAPQLASVSL LPVIQSFAKAAGVSVGVKDISLAGRIIAAFPENLRPDQRQPDDLAELGQLVKSPNANV IKLPNISASVPQLVAAVKELQAKGYAIPDYPQDPANDAEKAIRARFDAIKGSAVNPIL REGNSDRRAAVAVKNYAMSNPHSMGAWAPDSKTIVSTMAGNDFFSNEKSVTLTAEQAG DARIELVGADGSITVLKDKVSYTAGTVVDATFMSAKALDAFLAEQITLTKDAGILFSI HLKATMMKVSDPIIFGHAVKVFLQPMFDTYGATLAAAGISPNSGLGALLDQVAALPQG AEILAAIDAVMAERPALYMVNSDKGITNLHVPSDVIIDASIPALIRAGGKGWGPDGKA ADTNCIIPDSSYAPIYDESVAYFKETGALDPRTAGTVQNVGLMAQKAEEYGSHPTTFE IPHAGTARIVFANGDIVLEHAVEAGDIWRSASTKQAPIEDWVKLAISRQKAEGCQAIF WLDAARAHDAELIKYVEPILAAAGVADKFQIMTPRAATRVSLETIRKGKNSIAISGNV LRDYLTDLFPILELGTSAKMLSIVKLMNGGGMFETGAGGSAPKHVQQLAEENHLRWDS LGEFCALGESLKFLAETKDNDKARILGNAVDRATQGVLDNNKSPQAKVGQTDNRASHY FFALYWAQALATQNEDSSLLATFAPIARALEENEAAILAELSTAEGKPADLGGYYLTD ADKTESVMRASPTLVKILSVL" gene complement(138269..139120) /locus_tag="SKA53_00699" CDS complement(138269..139120) /locus_tag="SKA53_00699" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, inner membrane subunit" /db_xref="CDD:10470" /translation="MSDANLNTDENVTPDTVWVEHTSFVDQIPRSILMLFVFAVFVGL WQIATSFNLVSSIVLPTPVETFNDMIFVGKNLLTGDYMLSALWITTKEVIYGFALAMA IGFSLGILVGETAFGERAIMPYLVALDTMPKVAFAPLFIAWLGFGIESKVALAAFIAT FPIVVGTAAGLHATDENSRMLFKTMGASRLQTLFKMKLPMGLPQIFTGLKIGAVGVMA GAITAEFLGGGKGFGELIRVAASQLNTPRVFSLILYLSILGLGLYALVTFAQRRIVFW HRDTVSK" gene complement(139117..139929) /locus_tag="SKA53_00704" CDS complement(139117..139929) /locus_tag="SKA53_00704" /note="COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATPase subunit" /db_xref="CDD:10838" /translation="MTTISAATSDVQPALGAPVYELTHVSKTYARNRVIALDDVSLTL RKGSFSSVIGSSGCGKSTLLKIMAGLIPPTKGRVVLQGKPVTGTRRDIGMMFQQATLF PWRTTIENIVLPIEIRDGRAAAEKAKEKARALLDIVGLNGFEDVFPNELSGGMAQRAS ICRMLITEPAVLLLDEPFSALDELSRDMMNMELQRICTEQNATAFLVTHSIQEAVILS DDIYVMKPRPGRLAEVVTVDLPRPRTLDMMTTPKFGETVNYIRGLLDKGEAM" gene complement(139929..140879) /locus_tag="SKA53_00709" CDS complement(139929..140879) /locus_tag="SKA53_00709" /note="COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic binding protein" /db_xref="CDD:10584" /translation="MAQDLRDVTFVQPSPSAINSFPVFVAIGEGYFAEEGLNVTVESI NGSSAVLQALAAGQAEFGRPGPGPVLAARARGEDAVFIYNVAARSNFGVVVRADSDIQ GPEGLRGKVIGTGTADGAEVGFARNVMAGSGLTEGTDYEFLTVGDGGPATVGFTTGAM DAYSASTADAAILNQRGMAVRDITPGEFARFFGNGIATMGNVIETDPELVAGFVRAFA RGHAFALDDANRDTVLAHLKDANPQEGEDVQFQSALFDAVRSKTIPVDMTNGLGYQPP EVWEEWQDSLVSGGDLAAPLPDLTAAYTNEFTAMAHEAMK" gene complement(141012..141926) /locus_tag="SKA53_00714" CDS complement(141012..141926) /locus_tag="SKA53_00714" /note="COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /codon_start=1 /transl_table=11 /product="putative enzyme" /db_xref="CDD:10054" /translation="MRLATLLIGGKPAAAAQLASGAWLNIAQAAAADPQTKVEADSLQ SLIQGGDAAMAGVAALVAQADSGQHAHAVVSDAVLMAPIPDPRKNIFCVGRNYAEHIA EGEKAQNIKVGVTEHPVFFTKPPTSVVAPGGDVLIFPTISQDIDYEVELAVIIGKPGR NIAKADAFDHVFGYTILNDITARDVQRRHGGQYFKGKGFDGSCPIGPWIVTKDAIKNP HDLSIRLSVNGQQRQNGKTADMIFDIPTLIASLSEGLTLEPGDIIATGTPSGVGYAMD PPQFLKAGDQVVCDVSQIGQLANTVRNA" gene 142096..142788 /locus_tag="SKA53_00719" CDS 142096..142788 /locus_tag="SKA53_00719" /note="COG2186 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11894" /translation="MSKTEILVQRVKQMIDSHGYAHSDRLPCEREMCQTLGVTRNQLR RALAELEGQGLIWRHVGRGTFLGARPVLNLEDVTYLRDRVKPAQVVSVRFTIEPELAR LAAIYGKKADHEEIQHCADRCRNAPDWRGYEAWDNKLHHAIARASQNQLHLYYFETLN VVRRSVVWGQPRKTIKPADGYSSFHEHDVIVQAILTHDADLAAHSMMDHLRSVYSRIL PSMNLDIPKEYA" gene complement(142853..143536) /locus_tag="SKA53_00724" CDS complement(142853..143536) /locus_tag="SKA53_00724" /note="COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /codon_start=1 /transl_table=11 /product="fumarylacetoacetate hydrolase family protein" /db_xref="CDD:10054" /translation="MSDFVIPLPAVTTIPVASGGSFPVRRVYCIGRNYAAHAIEMGHD PDREAPFFFQKNPNNLDSTGTFPYPPHTSDVHHEAELTVVLKAGGTNIAVENALDLVY GYALSLDMTRRDLQGEMKKAGRPWEIGKAFERSAPIGPIHIVSEVGHLDSGAITLKVN GELRQQGDLNQLIWKTSEMISYLSEYFELAAGDVIMTGTPSGVGPVVKGDVMEMEIAG LGSLTVTVT" gene complement(143852..144766) /locus_tag="SKA53_00729" CDS complement(143852..144766) /locus_tag="SKA53_00729" /note="COG1910 Periplasmic molybdate-binding protein/domain" /codon_start=1 /transl_table=11 /product="DNA-binding protein, excisionase family" /db_xref="CDD:11619" /translation="MQNYPDDESTRSGVPSLMTTTEVAEYLRVKQRTIYEMVTRQTIP FTRATGKLLFPRRLIDVWLEAQTEAPVTGAFRAAPIYAGSNDPLLEWALRQSGAGLAV LTHGSTHGLRELADGRAMLVGSHLLDAASGEYNLPAVQSFLPGGGFVMVHWARRTMGL LTGPGNPRAIKRLEDVVSQRLRFAARTEGAGSQQLLDVLLGRAGLTADDLQFAPRQAE THADLATMIEIGEADCGIGLQAVSGQLGFVPLVGNESFDLIMRRRDYFEPQVQALLAF ARTDAFAARAAHLSGYDVTELGKVRWNS" gene 144857..145552 /locus_tag="SKA53_00734" CDS 144857..145552 /locus_tag="SKA53_00734" /note="COG4662 ABC-type tungstate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="sulfate/tungstate uptake family ABC transporter, permease protein" /db_xref="CDD:13805" /translation="MDGPFLIALGLIASGDPALTDIIALSLKVTLTAVSIGCLIGLPL GAGLALAQFPCRGAIVVAFNALMGLPPVVAGLLVYLMLSRSGPLGDLALLFTPTAMVI AQAILILPIVISLTRSVVEDLWAEYREQLRSLGAGRLRAVPTLLWDGRVSLVTGILAG FGRASAEVGAVLIVGGNIAGHTRTMTTAITLETSRGSLGLAVALGIILLLITLSLNAA AWGLAQSARGRLG" gene 145513..146286 /locus_tag="SKA53_00739" CDS 145513..146286 /locus_tag="SKA53_00739" /note="COG1135 ABC-type metal ion transport system, ATPase component" /codon_start=1 /transl_table=11 /product="sulfate/tungstate uptake family ABC transporter, ATP-bindingprotein" /db_xref="CDD:10855" /translation="MGAGAIGTGTVGMKVDKVIAPAQSILPLQLRAVGYSVGKTRLLD GIDLTVRAGKRLVVMGPNGAGKSLLLRLCHGLIAPTSGSVSWQTQDPRPAAQAMVLQR PVVLRRSVRANLDYPLALAGYARAARDEMVQKTLARFGLIALAERPARLLSGGEQQRL ALARAWALRPQVLFLDEPSAALDPSATRAIEDLIGQFSAEGITIVMTSHDLFQARRLA QDIAFLHRGRLIEHGPAAQFFDAPQTPQARDFLGGALIW" gene 146294..147133 /locus_tag="SKA53_00744" CDS 146294..147133 /locus_tag="SKA53_00744" /note="COG2998 ABC-type tungstate transport system, permease component" /codon_start=1 /transl_table=11 /product="molybdate or tungstate transport" /db_xref="CDD:12341" /translation="MINKEKINMFSNTRAILLCAVSSLGSIVAVPAFAQDFITVASTT STENSGLFGHILPLFSEETGIEVRVVAQGTGQALETGRRGDVDVVFVHARSAEEQFVA EGYGVARFDVMYNDFVIVGPDSDPADTRAAQNAMEAMTAIAQAGAAFASRGDDSGTHK AEQALWSAAGIVPEGAWYLETGSGMGATLNTAVQVPAYALTDRGTWLSFANRGDLTIT YEGDPVLFNPYGVILVNPERHAHVKAQEGQAFIDWLVSDAGQQAIAAYQVGGNQLFFP NAQ" gene complement(147288..148856) /locus_tag="SKA53_00749" CDS complement(147288..148856) /locus_tag="SKA53_00749" /note="COG2268 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11974" /translation="MSALGWIIVIVIVAAIFIALAASFYQRATNEVALVRTGLGGRRV VIDGGALAIPFFHEINRVNMQTLRMDVARSGEASLITKDRLRVDVGAEFYASVTPNDN AVTRAAQTLGKRVFQPDQLKSLIDGMMIDALRSVAAQMTMDELHENRASFVKQVRDAL TDTLANYGLQLDSVSLTALDQTPFAALDENNAFNAVGMRKLAEVIAKSKKERAEIEGD SQVSVARAAMESERRKLEIDLEQRRAEIAQTQEVETLMAAQISEIAVRRANSERTAAQ ARIQMEQDIASADIAKELTLRRAEIAQALALEVAEQDRAISFAAKSQEESRAHADADT ARIDAVKASVAVQTARQMAEAERRKALTLLAAQEQAEAAAVRAKITAASDKATAADKT AAKREEAEALKAMKLAETEARLAQIQAENARSEAQVAMEVELARLQALPKILAEMVKP AEKITGISINQISGLDRKGGDGPTSPINQTVDAIMDMAVSLPALKKLGKNIGVEIDTN LLKTSPKPKNDHEG" gene complement(148870..149676) /locus_tag="SKA53_00754" CDS complement(148870..149676) /locus_tag="SKA53_00754" /EC_number="1.1.1.50" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-alpha-hydroxysteroid dehydrogenase" /db_xref="CDD:10756" /translation="MSWERAPLLKGKTIVVTGSASGIGQETARVCSAMGARVLGIDVT KRFDHVEEFYRADLSDGATIDALIDVLPKGIDGIANIAGLPPTAPADKVVAVNLFGLK HLTLGLIPKLNDGASIVNLASLAGFGWPDAVHAIRASEDVHVDDAARFAVDHQITNEG GRSYFFSKEALIAWTMQNRWTWRDRGIRMNAVSPGPVDTPILGDFLETLGARAEEDAR IMDRPGTPQDLAPIVAFLLSDMTTWIRGTNIPADGGMSSNILCEMHGLSS" gene complement(149678..151078) /locus_tag="SKA53_00759" CDS complement(149678..151078) /locus_tag="SKA53_00759" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="Aldehyde dehydrogenase" /db_xref="CDD:10741" /translation="MFDDINPSTGAVWAQVPDGGRTEARDAISAAQAAFPAWAALHFQ DRARILLKAADIWEARKMDFVAAAQAEGGGWFGKGMFEAGYVPEVFRAAAAMCYNAVG EMLPSQHGKISMVQRVPMGVVTVISPWNMPGILTSRGFAFPLAAGNTIVLKPSEDTPY AGGLFFAEIMEEAGIPKGVFNVVTCSRDRVAEMGDELVENPMVKGVSFTGSTPVGRQI AAKAGAHLKKACVELGGKDSLIVLEDADMDRATSAASFGSFMHQGQICMSVEKVLVHE NIYADFLRQFVARAAKLKTGDTADKSNVIGPLINDRQVERVKFQIEDALAKGAKAVLG GRVWDRFVEPTILINVTPDMAVWQDETFGPVAVVVPFRTDAEAIALNNDTEYGLSAGI ITADENRALEMSRKLETGMCHVNCSSVNDEPHVPFGGSKASGVGKHGGKWSMETFTET RWITLDRGGRPFPAVF" gene complement(151146..152291) /locus_tag="SKA53_00764" CDS complement(151146..152291) /locus_tag="SKA53_00764" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="putative branched-chain amino acid transporter ATP-binding protein" /db_xref="CDD:10284" /translation="MLELNNVTVSYGQHRALENASVKVSKGEIVVILGANGAGKSTLL KAASGICEGVVAGEIRLEGTDLLGLPANKIVDVGLALVPEGRGVFPDLSVRENLTLGA YSARAREDERVTLERVFTLFPKLSERTKQIVGTMSGGEQQMVAIGRAMMSNPTILTLD EPSLGLSPLLSKELFQNLARVKDLGIGVLMVEQNAKQSLAIADRGYLIENARVVHEDS AANLMRDPAVQAAYLGVGSSEPAAKVSATTTIPDTGSESFTIRPRSQKTQSADAILGR SVADLVAAASSQSVSANAQKRPSTSHQTKVVVPSDRLAAALAQIESGAINARKRPKPQ LLTHRQSIPPSLDRSPEAKPCPVIEVYRAPRVEVYRRQPDGNGFERK" gene complement(152284..153015) /locus_tag="SKA53_00769" CDS complement(152284..153015) /locus_tag="SKA53_00769" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="putative branched-chain amino acid transport system ATP-bindingprotein" /db_xref="CDD:10285" /translation="MTNHVLSLRGVTKRFGGLVAVNAMNFDVAEHEVVGLLGPNGSGK STTLNLISGALPLTAGNVSLWGSRISGLPAQTINRKGVSRTFQLVRLLPSMNVRDNVV VGAVFGHRRRWGHDANEHAEKLLERVGLGGKGDMSLGQLTYIDTKRVELARTLASDPK VLLLDEWLAGLNPTELQIGINLIKSLRDEGRTIILVEHVMDAIRSLCDRCVVMAAGTK IAEGTPTQVLSDKKVITAYLGDDDA" gene complement(153017..153952) /locus_tag="SKA53_00774" CDS complement(153017..153952) /locus_tag="SKA53_00774" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC-type transport system permease protein II (probable substratesbranched-chain/neutral amino acids) 2" /db_xref="CDD:13442" /translation="MSLTGTDTRNVLLATLGFGVCALLPFADTGYWLGLGVTIAMFTA LATSWALFSGPTHYISLATAAFFGVGTYVTGLGIETLPFWALVGLAGLIGAGLAALVG LATLRLSGVYFVIFTLGLAELVRQVITWVQNNTGQKGLYVLTDLDEAGIYWWLLGLCA AVFLTGWLIGRSRLGFALRIIGDDEIVAAHSGINTARAKILLFMVPGAVAAMTGAILA PRYVYIEPSLAFAPILSFQVVIMALLGGASRLWGPVVGVIPFTFLLETVSSNFPNQTT LVIGVAFLVIVYLLPNGFVGLLDKVLHRTKANEVT" gene complement(153949..154815) /locus_tag="SKA53_00779" CDS complement(153949..154815) /locus_tag="SKA53_00779" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="high-affinity branched-chain amino acid transport system permeaseprotein livh / high-affinity branched-chain amino acid" /db_xref="CDD:10430" /translation="MDILITGILLGGTYALIAMGLNLQYGVARIMNLANGEVLVAGGY FAFIAYTSTQLSPVLTIFVVAPIAFGLNWLIYVLMLQPLVSRAKNRGQLERDSILATF GLSFIGVGLMLSFFGGDYFSYSFLAVPVELLGNTYGANRVLSFVMAVVICGALYLWLN RSRAGLAIRAIATAPASARLVGIDVKNLSALAFALGGAVTAVGGALISTYLTLDASTG VVFTLKALIIVIMGGVGDVRGTIVAALLLGVLETVVASLLDPGLTLAAAYVMFLGILL FRPQGLFGKKVT" gene complement(154872..156071) /locus_tag="SKA53_00784" CDS complement(154872..156071) /locus_tag="SKA53_00784" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="Putative branched-chain amino acid transporter substrate-bindingprotein" /db_xref="CDD:10552" /translation="MNRRPFLKLVSALTIASALAANAANADTIRIGAVAPKTGPLAGG ATVTQWPSIYLWVEQVNAAGGLTVDGEKMLIELIEYDDQTNPGETIKAVQRLATQDDA HFIIAPYGTGLNLAAAPLFDRYGYPQIAVSAITDQQPELAAQFPNMFFTLGTTTALAA DVVAVLSDMRDAGQMGDKVAMVNVADAFGIELATAARPLFEAAGFEIVYETSYPLGTQ DLSPVIKGAAAAAPDAFVAWSYPPDTFGLTEQAMIENLDVKAFYTAVATPFPSYGARF GAAAEGVLGAGGVNPDSPAFMEYAAAHEAVTGAKPDYWASATTYASLEILAQSIEAVG LDRAAVTAHLKQSSFDTILGPISFDENNSNADFWTVGQWQGGVFKGVASRGRDGTSPV ILKDGWE" gene complement(156122..157507) /locus_tag="SKA53_00789" CDS complement(156122..157507) /locus_tag="SKA53_00789" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10741" /translation="MHRPAVRLDLISGANAAAFAVDAAVNAAASAFPEWSRWTTAERA KIMRNLMPALDAHRREFSALAAEEVGASRSWTEFNIDLAIGMLAHVASLGPALEDRLI IDPQSGKRSVIRRQPAGVALGMVPWNAPITLGVRAIAGALMCGNTVVMKGSERCPKTH QYLVDVLNASGLPKGVLNCVISSAEDAHDTMVQLIAHPCIRRINFTGSTRVGRDVAME AARHLKPVLLELSGKAPLIVLEDADLDAAVEAACFGAFFNQGQICMSTDWIIVVKAVA DTFVAKLEARTRQIVAADPVYEAATLGRMISAEAADRVNGLIEDAVSKGARLLVGGQI DGCVMQPALLDGIAANMRAYREETFGPLASIMRVHDADEAVSIANDSQFGLNAAVFSR DLDRAQAIADRLEYGVVQINGPTVHDDPSMPFGGMKQSGFGRFGGEQAINEFTELRWI ATHQDGRSPTL" gene 157649..158560 /locus_tag="SKA53_00794" CDS 157649..158560 /locus_tag="SKA53_00794" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /db_xref="CDD:14970" /translation="MKKVITGLATHQTTIHADVFHGGLGDRFLGGLVDFPGRTTRCLL VLSGSAVRLTPDSEETIVGPAINWGPKDLDTRIKAKAGSNGVIMTLGDTTLSDAIGHK PEVAALRLMSGREFTLNLREKPDIVQTLSTCFAAIFKELDAAQTGMETVIEAQIRIML VSLWRAGVNEMIEDQSYKTANLTLERFRHLVEAHLRDRWPVKRFAAELGVSPDRLHDI CTRTLGKPPQRLIRDRLTFEAQALLQRSHQTLDQIADHLGFSSTSQFSAFFSTELGMP PGAFRKANAEHAGSLQKMPVASYADWP" gene complement(158571..159620) /locus_tag="SKA53_00799" CDS complement(158571..159620) /locus_tag="SKA53_00799" /EC_number="5.5.1.2" /note="COG0015 Adenylosuccinate lyase" /codon_start=1 /transl_table=11 /product="3-carboxy-cis,cis-muconate cycloisomerase" /db_xref="CDD:9891" /translation="MTGFTDHPWLGGLLGDSETTAIWGPAQQMRHMLAFEAAFTAALG AVGRISADKAQQVARLIVEFQPDLDALKTATMRDGVVVPELVAQLKRAAGADAAAIHA GATSQDVIDTALALTIKASNALLADRLSALDASFENLANRFGDQIIMGRTRMQAAMPM RFAERLATWSQPVARHALRLDRLRPEIEVLSLGGAVGDRAALADDANAIAAEMAAGLG LYNPPKAQHAMRDHIADYANLLSLVTGSLGKMGQDICLMAQQGIEEISLQGGGGSSAM PHKHNPILAELLVSNARFNATQLAGIHHALIHEHERSGAAWVLEWMILPQMAAVTARS LSAAQDLCARITRIG" gene complement(159617..160396) /locus_tag="SKA53_00804" CDS complement(159617..160396) /locus_tag="SKA53_00804" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="beta-ketoadipate enol-lactone hydrolase" /db_xref="CDD:10466" /translation="MTFVSLNGATLHYRFRAGSGRPVVFLNSLGTDFRIWDAVIAALP AQTPVLCIDKRGHGLSDGTEITMHHLVGDVAALMDDLGLASALICGVSVGGLIAQGVT TTRPDLVSGLVLCCTAAKIGDAAMWNTRIDAVRTGGLAALATAILERWFSARFIAERQ VELSGYRNMLSRTPVDGYAGTCAALRDTDFTAATRTIRVPTHCIAGSEDLSTPPDLVR GLCALIPGATFQLIAGCGHLPCIEAPHLVAEAINLMHKSIR" gene complement(160422..161258) /locus_tag="SKA53_00809" CDS complement(160422..161258) /locus_tag="SKA53_00809" /note="COG3246 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24077" /translation="MTTPCIICVAITGSLPTKANNPAVPITITEQIESTQEAFEAGAS IAHCHVRDDAGKPTSDPARLARLKEGIEKHCPGMIVQLSTGGRSGAGKERGGMLSLAP DMASLSVGSNNFPTRIYENSPDLVDWLAAEMMTHNVKPEIEAFDLSHIVQATRMAADG RLKGPLYVQFVMGVKNAMPADEPIFDFYIETLKRLAPDAQWCAAGIGPAQLTVNEWAI SKGGHTRTGLEDNVRLDRDTLAPSNAALVRRAVELCAKYDRPVATWQHARNILGLQKS AA" gene complement(161265..161870) /locus_tag="SKA53_00814" CDS complement(161265..161870) /locus_tag="SKA53_00814" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="protocatechuate 3,4-dioxygenase alpha subunit" /db_xref="CDD:12813" /translation="MTMTQSLDYRKETASQTAGPYVHIGLAPGDAGFDIYAHELGHDI AGPNAKGQRIKVTGIVTDGTGAPVKDVLIEIWQANAAGIYPGQGDVEDGFRGWGRVIP DFESGEFTLETIKPGEVVGRDGRKTAPHLNLWLVARGINVGLNTRMYFDDAAAANDKD PVLTLIEQAHRRDTLIAKGDGETYRFDICLQGENETVFLDV" gene complement(161867..162586) /locus_tag="SKA53_00819" CDS complement(161867..162586) /locus_tag="SKA53_00819" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="protocatechuate 3,4-dioxygenase beta subunit" /db_xref="CDD:12813" /translation="MTSELYQRDREWHPPALAQNYKTSLARSPRNALLSIQGSASELT GPTFGHDEIDAIDNDLLRNYAKTGDPIGERIIVHGRVLDENRRPVPHTLVEIWQANAG GRYRHKKDSYLAAIDPNFGGCGRTLTDENGFYRFRTVKPGAYPWRNWINSWRPAHIHI SVFGTAFAQRLITQMYFEGDPLIAKCPIVQTIPDQRAIDQLVAALDLNATIPLDSIAY KFDIILRGSRSTFFENRPEGN" gene complement(162583..162966) /locus_tag="SKA53_00824" CDS complement(162583..162966) /locus_tag="SKA53_00824" /note="COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit" /codon_start=1 /transl_table=11 /product="4-carboxymuconolactone decarboxylase" /db_xref="CDD:10469" /translation="MVDRFDQGMTTRRAVLGNAHVDKAEAAKTDFDLPFQTLITEGAW GSVWASDAITQRERSMITLALLAATKNFEEIPMHIRATARTGASKQDVIEAFQHVAIY AGVPAANHAIKLAKQTYAEMEGEQT" gene complement(163009..164178) /locus_tag="SKA53_00829" CDS complement(163009..164178) /locus_tag="SKA53_00829" /EC_number="1.14.13.2" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="4-hydroxybenzoate 3-monooxygenase" /db_xref="CDD:10524" /translation="MKTQVAIIGGGPSGLLLAQLLHRHNIESVVLERKTKDYVLSRIR AGVLEQGLVKLMEEAGCADRLHAEGYEHDGTLLSYGDEMFRIDFTEHTGTPVIVYGQT EVTRDLYAAREKAGGLIEFNVDDVVIHGADSDAPYVTYRVDGEDRRLDCDFIAGCDGF HGVSRQTIPLDVRREYEKVYPFGWLGILSETPPVNHELIYANSPRGFALCSMRNENLS RYYIQCSLSDKPEDWTDEAFWQELKRRIPADQAARLVTGPSIEKSIAPLRSFVTEPMR WGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLYHGLTDYYARGSTEGIDRYSEKALAR VWKAERFSWWFSSMMHRYPDQSEFDLKMQVADLEFLRSNKAAQKAMAENYVGLPY" gene 164274..165185 /locus_tag="SKA53_00834" CDS 164274..165185 /locus_tag="SKA53_00834" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="pca operon transcriptional activator PcaQ" /db_xref="CDD:10453" /translation="MDRRIKFRHLNAFSTIARAGSLKRAAEQMNLTQPAISKALKELE EIIGVVLLARSRAGVQLTAEGEIFLQFAEQSISALRHGLRNVRATGLSAGKLRVGALP SVVSHLLPQAVSDFGETNPDTLLELHEGPHQDLVTRLRNGGLDLVVGRLGRPETMTGL EFLQLYTEQVVVVAHPDSPAVSVRQWQDLDRFRVLYPPQDSAIRSLIARLLISQGVPL FTNRIESASSAFGRAVTLADPQTVWVISYGVVAGELAEGRLVALDLDTSATTGAVGIM SRSQEVRSVEARAFISALLRAAPDAMA" gene complement(165188..166465) /locus_tag="SKA53_00839" CDS complement(165188..166465) /locus_tag="SKA53_00839" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10524" /translation="MTHPDVLIAGGGIGGLSLALTLHQIGVSCRVIETSPVMKPLGVG INIQPNAVRELFDLGFTEQDMNSVGVPAREWALVGLNGKEVYAEPRGLEAGYEWPQYA AHRGAFHMLLYRKVIERLGADAVLLGSRVTGWRQSDTGVTAVVTGSDGRTEDQTAQLL IGADGIHSAIRAQMHPDQPPIHWGGAVMWRGTVRAKPMRTGSSFVGLGTHEHRMVIYP ISAPDSEGYAQINWIAEVTRDNAGGWQEQGWFRPVEVADFAHHFDQFRYDWLNVPEML AQTDCAYENPMIDRDPIPTWVDGPVALMGDAAHAMYPTGSNGASQAIVDARVIGAKIL ELGVTPAALSAYDAQLCAPISALVLRNRGAGPFGLLNLLDERCGSVFEDIEDVIPAQE RSEFMATYKAAAGFAIERLNAAPATLPVGARVS" gene complement(166489..168009) /locus_tag="SKA53_00844" CDS complement(166489..168009) /locus_tag="SKA53_00844" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase family protein" /db_xref="CDD:27628" /translation="MTAFVAPTEDILFSLHHVAGAGALAAWDPELAGDILGHFAGFAE RVIAPLNAVGDRQHAQLVDGRVRMPDGFVAAYAQLAQDGWQGLTAPAAFGGMGASPLI AAGVSELFSGANHAMQMVCNLVPGAIATLMKYGTAAQQNAWIPKLASGAALSTMCLTE AQAGSDLSAIRCRAENTGDGWRITGEKIFISGGDQDMSAEILHLVLARSSAANAGMNG LSLYMCPAQPDVSVTRIEEKMGLHASPTCQLRFDGAKAELIGTEGQGLQAMFTLMNHA RIDVALQGVAHASRAADIAAAYAAQRIQGRQPHGSPALLNQHADVQRMLDDQRHLALG ARAMCHIALVAVETADSPALCDFLTPLCKVFCSEAGIRAADLGIQILGGYGYLNEYGL EQIWRDARICAIYEGANGIHERSIATRGLRAGGGADEFADLVTDLAHGSAPVLQRLAD WQILRSAMSQTSDPLPQAHAFAQQTANLFFAAAWARIDAVAENHNSPSELRRLHRR" gene complement(168018..169196) /locus_tag="SKA53_00849" CDS complement(168018..169196) /locus_tag="SKA53_00849" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="cytochrome P450" /db_xref="CDD:11832" /translation="MPNLAPLDEQITLDQLDRDPFPIYRRLRAQAPVLRVKSAGRTLL TKAVDTKYVKDNPEIFSSDDPNTPMKRAFRAHTLMRKDGDEHRRERMAMAPAFTAKVI QTDWMPKYEQIAREYVSRLPRGEIVDLFAILSGAYAARGLAILLGMEDASDEDMLEWS QALIEGAGNFGWRDEPFARSDRANDAIDALLDRIQDRHRAAPNNSAFSVMLNAEDPIP ISQIYANIKIAIGGGINEPRDALNTIIYGLLTNPDQLAEVKRREDWDKAFEEGVRWVA PISASSRLVTVDTEIRGYLIPKGDTVMTIQASANRDEDFFDNGEVFEVYRDKNPHQSF GNGPHFCQGTHVARRAVGKVMLPILFDRFPNMEIPDTDAVIWRGFGFRGAVQIPVLLK " gene complement(169224..170114) /locus_tag="SKA53_00854" CDS complement(169224..170114) /locus_tag="SKA53_00854" /note="COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11867" /translation="MVDFTKVKAIDFHTHAEEPCCDHRDDGYNEFQAGMAAYFKNPAG AQGMLPTVQDTANYYRERNIAAVIFPVDAERETGFRRYSNEEVAGICAENDDILIPFA SVDPHKGKAGAREVRRLVRDFGVRGFKFHPTMQGFYPNDRETAYTVLEACAEEGAITL FHTGQTGVGSGMRGGMGMRLKYSNPMYLDDVAVDFPDMPIVLAHPSFPWTEEGLAVAQ HKPNVYYDMSGWSPKYFPETFIRYANSILKKKMLFGSDWPAITPDRWLADFEAAAFKD EVRPLILKENALRILGEATS" gene 170211..170996 /locus_tag="SKA53_00859" CDS 170211..170996 /locus_tag="SKA53_00859" /EC_number="4.2.1.17" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /db_xref="CDD:10752" /translation="MMQSSARDTSVTRVEFDGDIATIIFNRPEKRNAMNDALVDALDA FFSNPPEGVSAVILRGEGGHFCSGLDLAEHESRKPIPGVYHSRNWHRVSELIEFGGLP VISVLTGAVIGGGLEIATSTHVRIAEPSVRFQLPEGRRGIFVGGGATVRVGRILGADR MREMMLTGRSYGAEDGLALGLTHYAVAEGEGVPLALKLARRIADNAPFSNYLMINAIS RIGDMSRSDGMFTESLAAAMSQSSAGAQEGLRAFLEKREPKFR" gene 171135..172118 /locus_tag="SKA53_00864" CDS 171135..172118 /locus_tag="SKA53_00864" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctP subunit" /db_xref="CDD:8627" /translation="MAFAQDATLRFHQFLPPVAPLPAFAFKPWGERLEAASGGRLRIQ HFDAMALGGRPPELLDQARDGVVDIAMSVVGYTPGRFPRTEVFELPFIMKNSIATSLA FQQMIEEDFGESEYGDFKVLAGWVHGAGLIHSEEPITKLEDMAGKTLRGPTRIINDLL SELGAEPVGMPLPAIPEALSKGVINGTVIPWEVTPSIRLAEMVSNHTEFGGPEALYTA TIIMVMNKDAYDALPDDLREILDAESGAAMAQAFSQVMLDYDAPGRQIALDAGNTITT LDEAEVARWKAAAQPVIDRWVADMDAQGIDGQALIARAKELIDEKSAMLGV" gene 172240..172716 /locus_tag="SKA53_00869" CDS 172240..172716 /locus_tag="SKA53_00869" /note="COG0531 Amino acid transporters" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MALAGGLLLLVIIVLTCVSIIGRALFSSGICCGPIRGIYDYTEI AVGAAIFAFLPWCQYQAGHAAVDLFKPAFPDGVNRLLNLVIDIAMLVLASLIAHRLWL GMLDKERFGETTLIAQVPVWIGYAACLVGAVGFVLVAAFCVLRALRGLIGLEPVVE" gene 172722..174053 /locus_tag="SKA53_00874" CDS 172722..174053 /locus_tag="SKA53_00874" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11306" /translation="MSDLALALWSFPVLLLLVFLRVPIALAMMSVGIGGAYLVYGTAL PVLNAFKNVTYGTFSNYSFSIIPLFLLMGQFATLSGMSAALFRAAESFLGHRRGGVAM SAIGACAGFGAICGSSLATAATMGQVALPELRRYGYPGSLATGALAAGGTLGILIPPS VILVIYAILAEQNIEKLFVAALIPGILAALGYILAISVWVRVSPNAAMVKDRVPWAER LVALAKVWPVLTIFVVVVGGIYVGVFTPTEAAAVGAAGTGLISVVSGQMTWPRLKQAI LATASASAMIYLIILGAGFYNSFLALSQLPQTAAAWVGGAGMSPWIVLVIVLFMYLVF GCVMDSLSMVLLTVPIIYPIMIVLDFGMSPQDFGLWFGILVLIVVEVGLITPPVGMNL FIINGMAKDTPIKETYKGALPFVVTDLIRVAILTMFPAITLWLVWFIDSLG" gene complement(174060..175847) /locus_tag="SKA53_00879" CDS complement(174060..175847) /locus_tag="SKA53_00879" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="feruloyl-CoA synthase" /db_xref="CDD:10192" /translation="MSQPIPSISGDFWAPTFAYEHRPDGTVVMRQEGQLPDYAPLLAD YMDKWADATPHMTWIARRKDGGEWRHITYAQGRAQAKAIGTALLDMGLGPQRPLLILS ENSLEHALLGMACAYVGVPYAPLSPAYSLVSTDHAKLRNIAALLKPGAIFADNGKAFA NAISAINNTDTTVINLDNPISGAVRFADLLDADPAPSQAARARLTPDTVVKYLFTSGS TGSPKAVINTNRMICAMQAIVRDCYRFLTHEPPVVLDWGPWNHTAAGNKVFYLVMTNG GSYYIDDGRPVLGKFDETLRNLRDISCTWYFNVPIGYDMLVDQLENDPALAATFFNKL GMMFYAGAGMAQRTWDRLRAAGRATTGHEVLLATGLGATETAPFALACTVPQEKSGNV GVPSLGLTIKLVPNGGKLEARIKGPTIFPGYYGDPAQTAQAFDDEGYYCMGDALRPAD PDDFSKGFFFDGRIAENFKLATGTWVAVGAMRAKLVDSMDELIRDAVIVGENEAELGA MVLLSQAAQTMDQAILHAALSEKLAAAAKDASGSATRVRRIIVLSEQPSFDRGEVTEK GSLNQRAMRSNRATSVAQLYSDDPAVIAV" gene complement(175864..176631) /locus_tag="SKA53_00884" CDS complement(175864..176631) /locus_tag="SKA53_00884" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="possible 3-hydroxyacyl-CoA dehydrogenase type II" /db_xref="CDD:25396" /translation="MQDWSGHGAIVTGAASGLGAATAERLAASGLKVTVFDMNDDAGR RQADKIGGCFAHVDVADPHSVADGITKAEAAHGPIRILVNCAGIGGASKTVSHGKAHD PAVFERVIRVNLMGSFNCASQAAARMVAQDPIDPDGARGVIINTASVAAYDGQIGQLA YAASKGGIVGMTLPMARDLAAKGIRVCTIAPGLFLTPLLHELPAEVQASLGAQVPFPS RLGDPREYGEMVDHITRNPMLNGEVIRLDGAIRMAPR" gene complement(176631..177113) /locus_tag="SKA53_00889" CDS complement(176631..177113) /locus_tag="SKA53_00889" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="bacterial regulatory protein, MarR" /db_xref="CDD:15281" /translation="MAPRALAKQTNAEMPDVVSDLEILIGYNMKRAYVAIQKDFRAAL GEGGLSPRTFSALSLVVAHPNISQSSLARLLGIERSGLVAIIDELERRNYLTRSHVPG DRRVQALVATHEGNAAYQATLATVQAHEERLLATLSATEKHTLMQILIKIRLTDKEDI " gene 177204..177668 /locus_tag="SKA53_00894" CDS 177204..177668 /locus_tag="SKA53_00894" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNLPEPKLEWVTDMIVELDPIRAMGQGRAGVRRIIPIVGGTMSG PKLQGKILNVGADWQTLFADGLAELDTRYALETHDGATIEICNYGFRHGPKDVIAAIG RGEDVAPDSYYMRTHARLETGDSRYAWVNHTLFVGVGARKEQSVLMRLYALM" gene complement(177871..178668) /locus_tag="SKA53_00899" CDS complement(177871..178668) /locus_tag="SKA53_00899" /EC_number="4.2.1.-" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="carnitinyl-CoA dehydratase" /db_xref="CDD:10752" /translation="MMQMRSDGPIHTRREGAVLEVTLDRPKANAIDLATSRIMGEVFR DFRDDDSLRVAILRAAGDKFFCPGWDLKAAADGDAVDADYGIGGFGGLQELPHLNKPV IAAVNGICCGGGLELALSCDLILASDTATFALPEIRSGTVADAASIKLPKRIPYHVAM DLLLTGRWFDAHEAMHWGLLREITTPADLLPKAWALARMLENGPPLVYAAIKEIVREA EAMRFQDALNRVTKRQFATVDQLYASDDQKEGARAFAQKRDPVWTGR" gene complement(178665..180575) /locus_tag="SKA53_00904" CDS complement(178665..180575) /locus_tag="SKA53_00904" /note="COG1042 Acyl-CoA synthetase (NDP forming)" /codon_start=1 /transl_table=11 /product="putative acyl-coa synthetase protein" /db_xref="CDD:10769" /translation="MGFDGPVWPVHPTRDQIAGVRCYPSLADLPGAPDATFIGVNRHA TLDVVTELAGMGAGGAICFASGWRETGDGDLQDRLVSRAGTMPILGPNCYGVINYLDG ALLWPDQHGGRRVARGVALISQSSNIVINLTMQARGLPIAYVACLGNAAQVGLAQLAR ALLADERVTALGLYIEGLGDAAGFATVAEAAQTAGKGIVAIKSGKTAAAQTAAASHTA SLAGGGAASSAYLRQIGVAEVNTPAELLETLKILHLHGPGLGRQLCAVACSGGEAGLV ADLAAPLALEFPPPGPAQVGHLAATLGPLVTIANPLDYQTFIWGDGPRTTEVFATMLA GYDAGLFIIDPPRPDRCDPASFAPALDAIVAAARATGKPAFPVASLPENFEEDRAIAL MDQGIAPLMGLETALAAVRAAQVTAGRAGWRNWTPIARTGPLTLLDEAAAKARLAAAG IAVPRGVTAPTITSLQSAAHDLTPPLALKGLGFAHKTEAGAVRLQLVTLDGQEQMPGA IGYLAEEMVTDAIAELLLGARRDPVYGATLTLGFGGVAAELLADTVTLVLPVTAPEIA DALRRLTLWPLLDGYRGRPRADLGAVIRTALTLQEMLATDRMLEEIEINPLMVGADFA VAADAVIWKDTP" gene complement(180922..182085) /locus_tag="SKA53_00909" CDS complement(180922..182085) /locus_tag="SKA53_00909" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase (EC 1.3.99.3)" /db_xref="CDD:27633" /translation="MHFAMTDEQRMIVDTTRAFVEAELYPHEALVERTGHLPMELIRE IQAKAMAAGLYAANMPEEVGGAGLDTLSWLLYERELGRANYALHWTCVARPSNILLAG TKAQREKYLFPCLRGETWDCLAMTEPGAGSDLRGMQANARQDGGDWVLNGTKHFISHA DIAGFTIAFMATGEEDTPRGPKKKITAFFVDKGTPGFTVREGYRNVSHRGYSNAILDF DDCRVPAENILGEIHKGFEVANDWLGATRLQVAATCLGRADRALDHAVHYAAERRQFG QQIGKFQGVSFKLADMAMELKAAELLTWEAGWKFDQGSVTEADMAMAKLKASEVLAMV ADEAIQIHGGMGLMDDLPLERIWRDARVERIWEGTSEIQRHIISRQLLRPHEG" gene complement(182085..183527) /locus_tag="SKA53_00914" CDS complement(182085..183527) /locus_tag="SKA53_00914" /EC_number="1.1.1.157" /note="COG1250 3-hydroxyacyl-CoA dehydrogenase" /codon_start=1 /transl_table=11 /product="3-hydroxybutyryl-CoA dehydrogenase" /db_xref="CDD:10967" /translation="MKAAIIGGGVIGGGWAARFLLNGWDVAVFDPDPDAPRKIAAVLD NAKLSLPALSDVPLPAMGQLSYAATLAEAVTGADYIQESVSERLDLKHRVYAEIQKAA PDTPLGSSTSGYKPSQLQEGAINPATIFVAHPFNPVYLLPLAEVVPSPATDAALIEGV KDTLRSIGMFPLHVRKEIDAHIADRFLEAVWREALWLVKDGIATTEEIDEAIRMGFGL RWGQMGLFETYRIAGGEAGMKHFLEQFGPCLTWPWTKLMDVPEFNDELVDLIAGQSDA QSGHHTIRELERIRDSNLVGFLRVLKDRDWGAGRVLKAHDAARRDVVQTPDADAPLVR LQVLPSWIDYNGHMTESRYLFAGSETSDTLLRLIGADMDYVAGGHSYYTAETHIRHLG EAKLGDHLTGSVQVLGADDKRLHIFITIAKDGDAVATLEQMLLHVDMAAGKTCPAAPT VLDRLFAIRDAHASLPRPAGAGRHIGQGKS" gene complement(183524..184363) /locus_tag="SKA53_00919" CDS complement(183524..184363) /locus_tag="SKA53_00919" /note="COG3246 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24077" /translation="MSPHVPRSPEQIATAAIDAAKAGAAIVHCHVRDPETGKPSRDPA LYREVTERIRDADTDVILNLTAGMGGDLVFDGTESMHRMSQTSDMAGAAERVQHVLDC RPEICTLDCGTMNFAEADYVMVNTPGMLRDMATRMVASGVRIEIEAFDTGHLWFAKQL VAEGIIPDPVLVQLCMGVPWGAPDDLNTFLAMVNNVPAHWHWSAFALGRHEMPYVAAA VLAGGNVRVGLEDNLYLSKGVLATNAQLVEKATTIIENMGARVIGPDAVRDRLHLTKR APL" gene 184476..185465 /locus_tag="SKA53_00924" CDS 184476..185465 /locus_tag="SKA53_00924" /note="COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /codon_start=1 /transl_table=11 /product="transcription regulator" /db_xref="CDD:14108" /translation="MAIYENVMTISESIFAPSTQPLDIAVLVLPRASILEVASVLDPL RNANRHLGQDRFRWRVVSPSGADVALTCGIALPAIGPLAAADGADALIVVAGYNQSEV ATRPLIADLRRVAGRFRAVGAVDAGPWVLARAGLLDGHRATVHWEDLEDFASAHTSVD VVPDRFVISRNRFTAGGAAPAADLMLHLIGARCGAGLAGQVAASFQYEPQSDGSRPQR PGLLPVVGDVRLAGALALMNAHLEDPLPLDTIARAQGVGLRRMEQLFRDNLGQGPGAA YLDLRLQMARRMVTDTRHDLRAIALRCGFVDPTSFSRAFRRRFGVPPSRIRSS" gene complement(185452..186999) /locus_tag="SKA53_00929" CDS complement(185452..186999) /locus_tag="SKA53_00929" /note="COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9904" /translation="MTTVAQSLVRWLQQMGTEVIFGIPGVHTIELYRALPDAGIRHVT PRHEAGAGFMADGYARVSGRFGVALVITGPGLTNILTPMAQARADSVPMLVISGVNRR DSLGKGLGHLHELPDQLALSATLGPAFHLDRADDLPAILDQIAGALTNGRGGPVHLQI PLDLMAAQAPDAPSRIADQAAAAVPDVSAANALLAQALRPVIVAGGGCRRAGAALQAL ADRLGAPVILTTNARGLMHAHPLVVPAAPSLAPVRELIASADQLLVLGSEIGPTDWDM YDDGGLPDLAGMIRVDIDAAQLARHPAALTLQGDLADILPLLHGATSADGAQRAAQAR NAAHAALPAGYAAEIALLNRLRDSCPDAIMVGDSTQVIYAGNLYYDHDRPCGWFNAAT GYGALGYAPGASVGAALAAPDARILCLIGDGGLMFSPAELLTAVEENLNITFIVFNNA GYGEIASAMKAAGAQVLGCTPRPPDFADLARACGLPFTRTTPDAIDATQSGPRMIEVT LPPVTTT" gene complement(186996..188177) /locus_tag="SKA53_00934" CDS complement(186996..188177) /locus_tag="SKA53_00934" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase, putative" /db_xref="CDD:10310" /translation="MMQYADVTTRLAGLGSDKWVLSAAANARIRAGEAIINLTIGEPD VPTPAALIDSAITAMGAGRTGYSNGRGEPSLLNALSGKYSALTGRSIGTDRFLCLPGT QTSLYLVLTALCDPGCEVILGDPMYATYEGLIRASGAVPVPVSLDPAHAFRLQAADVA AAITPATRVIMLNTPHNPTGAILRPADLDAICALAAQHDLWVVSDEVYGNLTHDGAVF TSALANPTYEDRVIVTASISKSHAAPGFRSGWVCGPAAFCTRALPLSETMLFGSQPFI ADMTAQAVAGAPDLATAMAARMARRAGIIHAALDGVAGLHVHKPEAGMFALLDIRALS RDSKAFALALLEAEAVAVMPGASFGKAFEGWLRLALNASDDATREACTRIKRFAMSWP R" gene complement(188178..188807) /locus_tag="SKA53_00939" CDS complement(188178..188807) /locus_tag="SKA53_00939" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /db_xref="CDD:7613" /translation="MTARRTFIRAGEEARRLALIDATLDCIAEGGPQAATVRAIALKA GVTPGLIKHYFDTKEDLVASAHETLMTRMTEASAAALDDLPADPVARLAGFITNAVTP PVVDPRAMALWAASMQLVPRDAAMRDVHEATYLAFRDRLERMIANALAAAGKPHDTAT TRALAIAGNALLDGLWIEASVLPDQFAQGEMRSIAIRAFARLLDLKLSE" gene complement(188804..189673) /locus_tag="SKA53_00944" CDS complement(188804..189673) /locus_tag="SKA53_00944" /note="COG1834 N-Dimethylarginine dimethylaminohydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11544" /translation="MQFGAEDRSKPLAAVIMRAPGPAMAKARPQDWHYGAGFDPARAE TQHAELARIVTASGAKVHWMPSADDSLSDAVFVQDPSFVTRHGAVILNMGKALRRAEP DMHAAFYDSIGVPVIGRLTGDATVESGDCFWLDPQTLAVGRGVRTNQAGIAALSDILR PYAINVQAYDLPYWTGPAACLHLMSLVSPLGPDIALIHAPLLPYALWSDMRARGWTLL HAPEDEFMASNGLSLNVLALRPRDVVMVDGFPQTRTLMEDAGCKVQVFDGDALCIACE GGPTCLTRPVLRA" gene 189722..190633 /locus_tag="SKA53_00949" CDS 189722..190633 /locus_tag="SKA53_00949" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="polar amino acid uptake family ABC transporter, periplasmicsubstrate-binding protein" /db_xref="CDD:25526" /translation="MARYNHKNVAVAALPVAAFANVASKPALRDHHKKRKSVLTFNKE RKIMKTLALLTTTALIAAAAGLAQAQEVRIGIAAEPYPPFASPDAAGNWVGWEVEIID AVCAAAALDCVLTPTAWDGIIPALVSGRIDTIMASMSITADRMQTIDFSDPYYNTPTV IVGQRNMQMDASPESLAGKVLGVQVSTIHQSYAQAYFEGATELRTYQTQDEANQDLAA GRIDATQADSLAMDDFLATAAGACCEVKGAVAADEAILGAGVGAGVRKGDDALREAIN TGIAAIIADGTYDAITAGYFATSILGN" gene 190759..191391 /locus_tag="SKA53_00954" CDS 190759..191391 /locus_tag="SKA53_00954" /note="COG4215 ABC-type arginine transport system, permease component" /codon_start=1 /transl_table=11 /product="polar amino acid uptake family ABC transporter, permease protein" /db_xref="CDD:13467" /translation="MQISLGAFALGLLIGTAGALGKLHGGPVTRDLLAVYTVVVRAVP ELILILILYYAGTDLLNQALRALGQRPVEISGVVAGIAVLGIVQGAYATEVLRGAIQS VPRGQHEAARAYGMGPVQIFRRVTIPAMLPLALPGLSNLWLIATKDTALLAIVGFSEL TLETRQAAGSTRAYFTFFLAAGALYLLMTLLSGRIFGWIEARYRRGQASQ" gene 191388..192179 /locus_tag="SKA53_00959" CDS 191388..192179 /locus_tag="SKA53_00959" /note="COG4160 ABC-type arginine/histidine transport system, permease component" /codon_start=1 /transl_table=11 /product="polar amino acid uptake family ABC transporter, permease protein" /db_xref="CDD:13431" /translation="MNRQRIAQEVFVPHRIIMVAAALGLVVWAALAMRWDWIARYHDL AVQGIWRTLWLLGLSCLIGFALAVPLGLAQAAGPRFLAAPARAFCTVIRGTPLLLQLW LIYFGVGSLFPQFPWIRESELWPYLRQAWPYALLALSLSFAGYEGEVMRGAFKSVAGG QLEAARSMGMGRFAIFRRIWFPQALQRALPTLGGETVLQLKATPLVATITVIEIYAVS SRVRQDTFIIYEPLLLLAVIYMVIAGLLALAFKLLEQRFNRGMLG" gene complement(192157..193263) /locus_tag="SKA53_00964" CDS complement(192157..193263) /locus_tag="SKA53_00964" /note="COG4148 ABC-type molybdate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter, ATP-binding protein" /db_xref="CDD:13425" /translation="MTLQIKVQHAFAGFDLDVDLDLPAGVSVLFGPSGSGKTTVINAV AGLLRPDQGRIAIGDWVLTDTASRHHSAPHRRRIGYIFQDARLFPHLSVRQNLAYGRW FAPREAKATSMDRTVEMLGIGHLLSRRPATLSGGEKQRVAIGRALLSGPRLILADEPL AALDEARKAEILPYFERLRDEVAVPILYVSHASAEVARLATTVVALRAGRVIACGPPG QVLGDVAVVGARGAASLLTVRVVAHHADGLTELATAAGTLWLPRIADATEATLRVRIM AQDVILSRDRPAGLSALNILQGTISDLRLGEGPGAMVTLAVGEDRLAARITRRSAEAL GLAPGQTCHAVIKSVAVAPDAIGTGLRVSPASRD" gene complement(193260..193970) /gene="modB" /locus_tag="SKA53_00969" CDS complement(193260..193970) /gene="modB" /locus_tag="SKA53_00969" /note="COG4149 ABC-type molybdate transport system, permease component" /codon_start=1 /transl_table=11 /product="molybdate transport permease protein" /db_xref="CDD:13426" /translation="MGGDWANWLGPAEWQAVRLSVRVAFWATVVSLPLGIFVAYALAR WNFWGKQLLNGIVHLPLILPPVVTGYLLLSTLGRRGPVGEVLDAWFGIVLSFRWTGAA VAAAIMAFPLMVRAIKLAIEAVDPKLEAAASTLGASRAWVFTTVTLPLILPGIIAGSI LAFAKAIGEFGATITFVSNIPGQTQTIPSAIYAFLQVPGGQEQATRLVIIAIVIAMAA LLLSEYLARRVAQRVAGS" gene complement(193970..194749) /locus_tag="SKA53_00974" CDS complement(193970..194749) /locus_tag="SKA53_00974" /note="COG0725 ABC-type molybdate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative molybdate-binding periplasmic abc transporter protein" /db_xref="CDD:10594" /translation="MPTAFARQQIVTAFAAAILIAAPMRGVAQDVTVFAAASLTGALD RVAEAWTAETGQTAVTSYAGSSTLAHQIQQGAPADIFISASVDWMDAVAASGDLQGGT RRDILGNTLVLIAHGQDAAPVTIDATLDLAGMLGDERLAMAMVDAVPAGIYGKAALTS LGLWDSVAPLVAQSDTPRTALAFVALNEAPFGIVYATDAAAQDNVRVIGTFPADSHAP IIYPAAITAQSDSANAAAFLDYLSSDNARAIWRAYGFSVVQ" gene 194926..195603 /locus_tag="SKA53_00979" CDS 194926..195603 /locus_tag="SKA53_00979" /note="COG2148 Sugar transferases involved in lipopolysaccharide synthesis" /codon_start=1 /transl_table=11 /product="putative glycosyltransferase" /db_xref="CDD:11856" /translation="MGAVVRGMSDVSRHDGRVGKQACGRAIRPDTGRPRLSKRVFDHV VALLLLGLLVPVGAVLLVLNPFANAGPLIYRQDRIGYRCRRFAAYKFRTMRCATGAAR GAFDALDADRITALGRVLRKSRLDELPQIINVLRGEMSLIGPRPDSYDHACVYLRDIA GYGARHNVRPGVSGLAQVELGYVDGIDGIRRKVALDLHYIAHASFRLDLWIAWRTIIV VLARKGA" gene complement(195600..196325) /locus_tag="SKA53_00984" CDS complement(195600..196325) /locus_tag="SKA53_00984" /note="COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases" /codon_start=1 /transl_table=11 /product="serine/threonine protein phosphatase" /db_xref="CDD:14907" /translation="MLLPDYLPPFGFDAAPPAPDRPFVAIGDVHGRADLLAPVLERAV ARALPVVLVGDYIDHGPDSAGVLRLLHDHAGRIDLTCLRGNHEDLLLRFLRQPRKMGR TWLRYGGRTTLASYGITDLPADITLADLSRARNALRAAMGATVSWMQSMPYWWQSGNV AVLHAGADPARPLANQLPKAMAWGHPDFGVVPRSDRVWCVHGHRIVPRLAIRDGVVSI DTGAWKTGKLCAALIGEGGVRPF" gene 196465..196722 /locus_tag="SKA53_00989" CDS 196465..196722 /locus_tag="SKA53_00989" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPDPFSADYVNLTSPAVAHYVVTPSDSADLPVRPRAIFVQSAGT AALQDKDGQVVTYDVAAGAVLSIRPVRVLASGTTAQLVAWY" gene 196726..198330 /locus_tag="SKA53_00994" CDS 196726..198330 /locus_tag="SKA53_00994" /note="COG3979 Uncharacterized protein contain chitin-binding domain type 3" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIGLELSPASTGHTAPDPLAAFFAIGRGAHVALGPGPQGGLSIW TETGPATAACLRLDGANAGTRLSWRETLSCALRKVYPVAAFGLSAGWSQLQSSGSGLS GSYTGNRAVSTTALTATISVTVDRAKPYDLWVCFTGRIAGGYCRVDIDGGQALVDAIG DPAGLGFKAFSTQTATDMQRRRSIRVATGLTGSHVVTLSHGGAATPGGTSLMIEAVAL SADLSDDGILPPVWQPATAYVMGDEVQWQGTFYAARATGVSGTTPPVHLSGISGDGAL DWRADNRPTYPLFQAVDYASEREYAARVRIAGTTTEIGGQTHGNEALVARSVTLDAQP FVPTTSGTGLSVGAEIATFENTTWQGATGGPIGTCQLIRRITPGAVRHDVQVTATGPD AVFDWLYLGMLPFVHWDGESGALAVQQVAGPAGLISIGDLAGTSPAQISLGATARLGL VGRALTGDLRYGCQVVATGIAGNLVGPVSTFLRPNIEASAAAGPLDWTAKAYFAADLP AGTVMQAGDVIGFSSHHILAVTPVQA" gene complement(198321..200177) /locus_tag="SKA53_00999" CDS complement(198321..200177) /locus_tag="SKA53_00999" /note="COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis" /codon_start=1 /transl_table=11 /product="protein-tyrosine kinase" /db_xref="CDD:12544" /translation="MSQPMPALVEVDQPVAVDIRHIFRVLWAGKWVVVLTTFLAVLMA GYYGFTIARPQHAAVTIIEIRTTQAFAIPGQTSTDVPPGTQVQILLATPILEQVIAKL DLQDDPAFNRYLTPVPPLSPRGLRTTLRNLLQGRSEPVPDDAAIASKLVQNLRAAIRV ETPRDSDLLRVTVTTGDPDRAMAIANTLAAVYLADQVARKQDATAASIALLGARSADL RSHQAAIEAAITDLVARAGLHDPTRPDRLGHDLQDTTTRLASAQAALARASDTANTQR LTAQIAALQTNRADLAAALQALTAASHARDRMQRDLDMAIAQQAGYQQELRALTLGAA QIAPDSRVLNAATEARYIGPQKLLMVQIAAMVGGLGGLMLVALRHSLRRGFTDAAALQ DATGLPVLAQLPLLPSRRPARLLAALDVSTASAATEGYRHLRTALMLHGTKPPQVILS TSAIPGEGKTTQAIGLAHALALLGKRVLLVDADLRRGSFRRYFALAGTDGLAAVILGH IGLGAATEPSPIPGVDLLAGGAQHAAGGETLFAPALADVIAQARAAYDVVIIDAPPVV PVADAVVLAAADKLAAAGVAVTGVTLTQIDIRKQAQRGGVGFAQYGRGYFHA" gene 200319..201551 /locus_tag="SKA53_01004" CDS 200319..201551 /locus_tag="SKA53_01004" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMAFLRYCLNQPVGIAMTVRAALVAGNVAVLFGLALWLGLDGFG GLIVLWGLALVAATCLGFGGPLILLARLGDGAGMHPRAVIGLCIGWPVLAACGAGLAL RLVWPELPWLAVLAVAVVVNLASCLASILRALGSVHLSMILRDGAPMVALGAAGLLLT EPAAILWGMATGLGVICLGAAVLVLSHPQRASVISGNRPGAGLAADLWATTVLGMGLA QVDIIVGGQFLTPEQIGVYALLRRVANLVALPLSVATWVSAGPISAAHTARDTAALQS ASDAGARIAFLPGLGLAMLSLLALPVLAIWVPDLPVPVLLVLLGGTLVQLAFAQGMSV ATLTGRGDLAAGARLAGVAGYVAAVAFFAPLDPLRNALAAALATSLCAGLLWLWVWRS MGIDTLARPMRRRAWQIS" gene 201536..202876 /locus_tag="SKA53_01009" CDS 201536..202876 /locus_tag="SKA53_01009" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MADILIIALAALCTLLPFWIAARHGLLGWVSPLHLLGYFCGLGF LAKAVAYAAAPDLAFYARFDPAPGAALVGAIYLGGFVALICLGYLLACKPQPAAAQII AARAVAAGVQPMGALVGIALAVSVVTVLLILQVRGAAPGEAGVIAALNRVKQINVNAD GVGATLAGIKTLFVIPKYVFVLCLAQTILHPRPALLGMTLALGAALLGIALVSGDRFE LVELAIYALATHAVLGGRIGWRQGALGLAGATAIVMLSAYMTELRLGAQGASLLRQII GSTYFLDINVAVMVTGHLEPAQMLLGQSYGWWVFGWVPRDIWPDKPAIDLGVYFKREV MGITTGGAFNVTGPGEAFINFGWAGLAVAPALGWAFRVGEAFLLDAQRTARTGAAFLY PILFYPFVQACLQSSFSAFIVGAAAQLVLIVMIRTYFVRPLHWRAVPIERLSHA" gene 202869..203255 /locus_tag="SKA53_01014" CDS 202869..203255 /locus_tag="SKA53_01014" /note="COG0110 Acetyltransferase (isoleucine patch superfamily)" /codon_start=1 /transl_table=11 /product="acetyltransferase, putative" /db_xref="CDD:10532" /translation="MHNNVLRVLRLPAQIHRRAGLILATLWHRATLAQVGAGSRFQPG VRFDDPSSVIIGAGCYFWRGVAVSAEIGRAGLRIGDGVQINRGVHLDTTGGLVIGDDT LISEAAVIYTHDHGLHPWASGSACVR" gene 203225..203395 /locus_tag="SKA53_01019" CDS 203225..203395 /locus_tag="SKA53_01019" /note="COG0110 Acetyltransferase (isoleucine patch superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9985" /translation="MGVWIGLRAVILPQCRRIGDHAVIGAGAVVTRDVPAGAVVAGNP ARIIGQRAKVAA" gene 203392..204525 /locus_tag="SKA53_01024" CDS 203392..204525 /locus_tag="SKA53_01024" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="Glycosyl transferase, group 1" /db_xref="CDD:10312" /translation="MKVLHVTPSFYPATFWGGPIFSTKAICDGIAAAPDFSLRVLTTD AAGPAVRDRLRRVPLPYRVDYTRRIAGHSIAPGLLARLPAAMLWADVVHLTGTYSFPT LPVLGLARALRKPVVWSPRGALQATQDWPAAPRLRAKQAFEQAANLLRPAQTILHVTA PIEAAASRARLPDIQVTVIPNCVTIPPVTKRPYRPQGALRLMYLGRLHPKKGVDLLIA AMAALPVHVTLDIYGTGIPAHEAGLRAAAAGDPRIRFHGDVQASAKARAFGRADLCVL PSHSENFGITVAEALAHRVPVLTTTDTPWRRLAMMAAGACIDPACDDLAEAILRLGAG DLAAMGARGRDWMIRDFAPDAMVAGFASLYRSLATGEPQMVNA" gene 204522..205067 /locus_tag="SKA53_01029" CDS 204522..205067 /locus_tag="SKA53_01029" /note="COG0110 Acetyltransferase (isoleucine patch superfamily)" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /db_xref="CDD:9985" /translation="MTMQVNITANRRRRNWSGQAQAGRVLWGLCHPLFRFSPRPFWAW RVWLLRLFGARIGREVHIHPTVRITIPWHLHIEDQAAVGDNAILYALGPIHIGPRATV SQHAHLCAGSHDWRDPARPLLRPAIVIGPDAWVCTDAFVGPGVVIRAGAILGARGVAL RDLPARHIGQGNPMVTRPMDD" gene 205060..205962 /locus_tag="SKA53_01034" CDS 205060..205962 /locus_tag="SKA53_01034" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="spsA-like protein" /db_xref="CDD:10336" /translation="MTDLTVIILTRDEALHLPRALVSVQGIATRVVVVDSGSTDATVQ IARDAGADVWQHPWTNHAQQFNGALDRLETGTGWVLRLDADEYVTPDLAAQIAVGLPD VAGITVGRSMWFQGQPVRYGGLFPARMLRLFRHGQGRVEPRWMDEHIVVNGPVAHLSG GIIDDNRKPLDWWIAKHNAYASREVVDILNQRHGFLPADVAPSGAAGVKRWIKQHLYA RLPGGLRAGVYFLYRYILRGGFRDGAQARAFHVLQGFWYRYLVDAKLAEVERFMAQND AGPAAAIHAVLEIDLFAQTRSEAA" gene 205959..206708 /locus_tag="SKA53_01039" CDS 205959..206708 /locus_tag="SKA53_01039" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="Glycosyl transferase, family 2" /db_xref="CDD:10336" /translation="MKISVVTAVRNGAATLPRMLDSLRAQTHDELEHVIQDGGSTDGT LDVLRAQGLDGMALVSAPDGGIYQAINAGIRRATGDVIGVLHADDVLADASVLARVAQ ALADPGIDGVYGDLHYVARADASRVIRHWQAGPFDPRALARGWMPPHPTLYLRRAVFD RAGLYDTSYRISGDYDAMLRFLTTGQVRLAYIAHVMVRMQMGGASNRGFAQMIRKSRE DYRAIRAHNVGGIGTLVAKNLSKLPQFWGQF" gene complement(206733..207221) /locus_tag="SKA53_01044" CDS complement(206733..207221) /locus_tag="SKA53_01044" /note="COG3773 Cell wall hydrolyses involved in spore germination" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13093" /translation="MALACLALLAACGGPSGSSLRAPSADIDCMARAMYFESIRSSRD GMIAVGSVVMNRVEADAFPNTVCGVVRQKNQFAPGVMSKRMDSRSAPMARAAAQAVLA GERHPDIAQAMFFHAASYRASFNNIHYVLTTGGNAFYERRNPQNVTTPRPLPPREGIT GR" gene complement(207257..208528) /locus_tag="SKA53_01049" CDS complement(207257..208528) /locus_tag="SKA53_01049" /note="COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily" /codon_start=1 /transl_table=11 /product="mandelate racemase/muconate lactonizing enzyme family protein" /db_xref="CDD:14081" /translation="MDHDPPYPPPESHTMKLADLDIIITAPPAPGWGGRYWIIPKITT DTGVVGYGECYASSVGPEAMKAVITDVFARHMAGENPENIELMFRRVYSSGFTQRPDL TVIGAWSGLEMACWDILGKDRDRPVHALIGGRTNDRIRAYTYLYPRPTHPLPDFWSNP DMAAEVALDMVEQGYTAVKFDPAGPYTIRGGHMPSMHDLSLSVAFCKQIREAVGDRAD LLFGTHGQFSTGGAIRLGQAIAPYSPLWYEEPIPPDNVAEMAKVAGAVPIPIATGERL TTKAEFATVLRSGAATILQPALGRSGGIWETKKIAAMAEVYNAQVAPHLYAGPVEWAA NIQLAASIPNILMAETIETPFHMALIKSSLSVEGGYIPVPTAPGLGIDFDEDLARAHP YTGDGLHLQMQQDAIGYHGVNSFEGGAPVKA" gene complement(208549..209652) /locus_tag="SKA53_01054" CDS complement(208549..209652) /locus_tag="SKA53_01054" /note="COG1062 Zn-dependent alcohol dehydrogenases, class III" /codon_start=1 /transl_table=11 /product="oxidoreductase, zinc-binding dehydrogenase family" /db_xref="CDD:10787" /translation="MNPLTGPNMPQIKAAVCHAFGAPLTIETVTLAAPEHGEVEVTLK ACAICHSDVTYMEGGWGGTLPAVYGHEAAGHVTALGAGVRGIALGDPVVVTLIRSCGT CPSCASGRPVACESDMASGPLTMPDGSPLHQAMHTGGFAERVVVNQSQVVKLSDTIAM EAASLLACGVITGIGAVVNAAQLRAGQDVVVIGTGGVGLNAIQGARIAGARRIVAVDM TPEKLVIAQEFGATDTVLATSDKPWRAAKKAMGRGADAVFVTVGAIPAYDQAPHYLAN GGKVIMVGMPHSGAMSTYEPVMLAATGQGMVGSKMGDVVIARDIPWMVDLYEQGRLKL DELISGRWRLDQINEAITDTKSGSAKRNVIVFN" gene complement(209701..210960) /locus_tag="SKA53_01059" CDS complement(209701..210960) /locus_tag="SKA53_01059" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="tetracycline resistance protein" /db_xref="CDD:12168" /translation="MTLAKPSEPPNAGRMDKRLPVTFILISVMLDAMGIGLILPVMPA LIQEIEGTGLGQAAVWGGVLATIFAAMQFLFGPTLGSLSDRYGRRPVLIISLVIMALI YVLMALAQMIWLLLVGRIIGGITAATQATSAAYMADISRPEEKAANFGLIGAAFGMGF IFGPLIGGVLAEYGTRAPFWAAAVLAAANSVFGYYVLPETVTDRIRRPFDWRRANPLG ALRNIGALPGLKRLLLISFVYTIAFFVYPGVWAYFGAERFGWGPGMIGLSLAVFGVGI AVVQGLLIRPIIARIGERRAVILGLGVDVAAFVALGFVSNGWIALALTPLTALGSIAG PALQGIMSRTAADNQQGELQGTISSINAVATIIAPLLVTQTFWFFTAPDAPVYLPGAP FLLSALLTVSCIAVFMQTPRPKRARGT" gene complement(210961..211665) /locus_tag="SKA53_01064" CDS complement(210961..211665) /locus_tag="SKA53_01064" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="esterase EstC, putative" /db_xref="CDD:23022" /translation="MSDFLLIHGSCHGAWCWDDLIPHLTAHGHTARAIDLPSHGQDST AAHKVTLDLYASAIVAAIDTPVILVGHSMAGYPITAAAGLAPDRISALVYLCAYVPMA GKSLADMRRMAPSQPLLDAIIVDDARVTFSVDRAKAAEKFYHDVPPARAAWAIGQLGP QPILPQETPLEPRHTLPRHYLRCTDDRTIPPAFQSTMTADWPAGTVSDLPTSHSPFLS DPALLAQHLDRIARAL" gene complement(211668..212453) /locus_tag="SKA53_01069" CDS complement(211668..212453) /locus_tag="SKA53_01069" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="3-oxoadipate enol-lactone hydrolase" /db_xref="CDD:10466" /translation="MQVIRDGVALDYDVTGPDDGPPVVFANALGTTRAIWDQVLAGLP AGLRIIRYDMRGHGASDVPDGPYSMGQLVSDAEVVCDAAGVRDAMFVGLSVGGMVAQG LAVKRPDLIRALVLSNTAAKIGNPKLWQDRIDTVRTKGLPALSDTVLQRWFARGFYGT PAMQPWRAMLESTPVAGYTGTCAAIAGTDFYTPTAGLRIPTLGIAGIDDGSTPPDLVR ETIDLVPGSQFVLMRRVGHLACVEDPQTYAAHLADFMKAVGHV" gene complement(212453..213415) /locus_tag="SKA53_01074" CDS complement(212453..213415) /locus_tag="SKA53_01074" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="Threonine dehydratase" /db_xref="CDD:10889" /translation="MNIEMIRAAAQRLAGHARRTPILTSPFLDAIAGRRVFVKAECLQ HTGSFKFRGGWSAVSALPAEALQKGVIAFSSGNHAQGVALAARSHGAPAVIIMPADAP AVKIANTRALGAEVVLYDRTTEDRDAIGDRLAAARGLTLIKPYDEPQVIAGQGSCGLE IAAEMTALGVTRADVMVCCGGGGLTSGIALALAADAPGLRTRPVEPEGFDDATRSLAS GRIERNARLSGSLCDAIITPQPGNLTFPIMQQHCGPGVVVSEDQALQAMALAFDRLKI VLEPGGAVALAAALFHPDASEGDAVIAVATGGNVDPAIFAKALA" gene complement(213412..214230) /locus_tag="SKA53_01079" CDS complement(213412..214230) /locus_tag="SKA53_01079" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="predicted hydrolases or acyltransferases" /db_xref="CDD:10466" /translation="MPRFTTPDGLSLHYTDTGNGLPVMALAGLTRNGADFDHVAPHLP VRLIRPDYRGRGQSDWADPATYTIAHEAADVLALMDHLGLDRAAVLGTSRGGLIAMLL AATAKDRLIGVALNDIGPEIAPAGLAVIKEYIGRNPPQKTYAAAAEARATLWTDFAQV PMDRWLAEVRAHYAQTPDGLVVRYDPRLRDAVLAAGAQPVPDLWPLFDAFQDLPLALI RGANSDLLTVQTANEMARRRPDMIRTDVPGRGHIPFLDEPQALSALHAWLEEMQ" gene complement(214230..214907) /locus_tag="SKA53_01084" CDS complement(214230..214907) /locus_tag="SKA53_01084" /note="COG1011 Predicted hydrolase (HAD superfamily)" /codon_start=1 /transl_table=11 /product="haloacid dehalogenase, type II" /db_xref="CDD:10740" /translation="MPITTCVFDAYGTLFDVNAAAAQAADDPDFPRLADLWPAVARDW RRKQLEYTWLRAVADRHCDFWQVTQDGLDWALAAQGLDDPALRARLLALYRQLPTYAE VPAMLAALKARGLTTAILSNGSPDMLNAAVASAGIAPQLDAILSVETVGVFKPHARVY DLVGAQFGCAKDEVLFVSSNGWDAAGAAGYGFRTIWVNRAGDPPDRLYADPHHTLGNL VSIPDLL" gene 215037..215471 /locus_tag="SKA53_01089" CDS 215037..215471 /locus_tag="SKA53_01089" /note="COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase, FKBP-type" /db_xref="CDD:10773" /translation="MTQAKAGDKVQIHYTGTLQDGVTFDSSAGRDPLEFVIGSGQIIP GLDAAIPGMSVGEKKTVQIPCEEAYGAHNPEALQAVPRDNIPADIPLDPGTQLQMQTP QGQVVPVTVADVTETEVTLDANHPLAGKDLTFAVEVVAIKAA" gene <215615..215851 /locus_tag="SKA53_01096" CDS <215615..215851 /locus_tag="SKA53_01096" /note="COG0517 FOG: CBS domain" /codon_start=1 /transl_table=11 /product="arabinose 5-phosphate isomerase" /db_xref="CDD:12254" /translation="GIVTDGDLRRHMQGLLDHTAGEVMSANPTTVSPHALAEEAVNIM NSRKITCLFALDPANPGKVTGILHIHDCLRAGIV" gene complement(216029..216820) /locus_tag="SKA53_01101" CDS complement(216029..216820) /locus_tag="SKA53_01101" /note="COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)" /codon_start=1 /transl_table=11 /product="enoyl-(acyl-carrier protein) reductase (NADH)" /db_xref="CDD:10493" /translation="MTITLQGKRGLIMGVANERSIAWGIAKAMADAGAELAFSYQGEA FGKRLEPLAQSVGSSMMVDVDVTDEASMDAAFAMIKDTWGTLDFVVHAIAFSDKNELA GRIIDTSRENFKNSLTISCYSFIDVAKRASALMPNGGTLLTLTYQGSNRVTPFYNVMG VAKAALESATRYLANDLGPQGIRVNAISPGPMKTLAGAAIGGARKTYKHTEQNTPLRA NATLEAVGGTAVYLASDAGACTTGEIIRVDGGFHVLGMPQPDHLV" gene complement(216825..218054) /locus_tag="SKA53_01106" CDS complement(216825..218054) /locus_tag="SKA53_01106" /note="COG0304 3-oxoacyl-(acyl-carrier-protein) synthase" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) synthase" /db_xref="CDD:10178" /translation="MRRVVITGLGIVSPIGNNTTEVTAALKAGTSGIVASAEMAEHGF RSRVAGTLKIDVADHVDKRTLRFMGPGAAYAHIAMGQAIADAGLTQDQIVNPMTGLIA GSGGPSTSAMFAAHNVVTETGATKRIGPFAVPKCMSSTISANLATAHQIKGMNFSITS ACSTSLHCIGMAAQQVALGTQDIMFAGGGEELDWTLSCLFDAMGAMSSKYNDTPERAS RAFDAGRDGFVIAGGGAIVVLESLEGALARGAKIYAEVTGFAATSDGADMVAPSGEGG ERAMRGALRTLPAGRKISYINAHGTSTPVGDVGEVEAVRRVFGRGSTPPISSTKSMTG HSQGATGAQEAIYCLLMLQDDFIAPSINVETLDPALDPAEIAMVRVDNAGLDTVMTNS FGFGGTNGSMLLSKYQG" gene complement(218219..218980) /locus_tag="SKA53_01111" CDS complement(218219..218980) /locus_tag="SKA53_01111" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDAVNRFFNSIENAAYQSQTSLIELFVYFLTVELGQDAASAKD VDQCFTACDLTPPRATASRLSEGLKTKPQKFVKSGSGYKLQRHMRDQLSRKLGVETTT SKTSATLRSLSQEMPAGNAKEFLAETLDCFEVGANRATIVMAWVLTVNHLIDYILVHK LFEFNAVLAKNTDKRVKVSTITVRDDFNDIPEGKFIEFCRSANIISNDVRKILEQKLG TRNSCAHPSGVKILRSKVVDFVEDLVENVVLKYVI" gene complement(218977..219558) /locus_tag="SKA53_01116" CDS complement(218977..219558) /locus_tag="SKA53_01116" /EC_number="4.2.1.60" /codon_start=1 /transl_table=11 /product="3-hydroxydecanoyl-ACP dehydratase" /translation="MQTKLHINLTQGIVDVEGDVEFVKAVYHDFKDRLTQHSRTAPEA RELVDAPSSKTASAGSAKSKRRGQSRKKAAISEAGETSVNPDAPKLDKTVDTSKLKAF YDQFEPNSAPEKILIFLKYLIDIENIPAPSTDQIYTCFRAIKEKVPSAYSQAFRDTAS KKGFIDYNSATDIKITIMGENHFEHSLKKKAAE" gene complement(219752..220261) /locus_tag="SKA53_01121" CDS complement(219752..220261) /locus_tag="SKA53_01121" /note="COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases" /codon_start=1 /transl_table=11 /product="beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA" /db_xref="CDD:10632" /translation="MADFPTSFDKEALLQCARGELFGPGNAQLPAPPMLMMDRITEIS GDGGLHGKGHVVAEFDITPDLWFFDCHFPGNPIMPGCLGLDGLWQLTGFNLGWRGWQG RGYALGVGEVKLTGMVRPDRKMLTYKVDFTKALQTRRLTMGVANGIVEADGEVIYQVT DMKVALSES" gene 220409..220825 /locus_tag="SKA53_01126" CDS 220409..220825 /locus_tag="SKA53_01126" /note="COG0735 Fe2+/Zn2+ uptake regulation proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, Fur family" /db_xref="CDD:10603" /translation="MKDMDNHRGTDWLAGAGLRPTRQRLTLADLLVGDGQNRHVTAES LFDAASAAGEKVSLATVYNTLRAFCEAGLMREITVDGSKSYFDTNMTDHPHFYWEDTA SLTDAPADQLEIRRLPHAPAGAEIASVDVVIRLRRK" gene 220939..221097 /locus_tag="SKA53_01131" CDS 220939..221097 /locus_tag="SKA53_01131" /note="COG1943 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQDQRSDLLTARIGLLRDAVRLCRKQSPFRIDAAVILPADDHIC LSTASACA" gene 221090..221356 /locus_tag="SKA53_01136" CDS 221090..221356 /locus_tag="SKA53_01136" /note="COG1943 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11651" /translation="MPDNLTAVHKRRGEKGIWQRRFWEHVIEDEGDFALHLHLITTAP VRAGLVRRATDWPYASWPHVKGATLKTIARVPSSPDRAVAAPAM" gene complement(221295..222206) /locus_tag="SKA53_01141" CDS complement(221295..222206) /locus_tag="SKA53_01141" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRRDLSQFARVFHGYPPHMHYTSLSALTADKTRALSKGPICLIL IEDQVAVEQTIRHHAAIGFSTLIAFCDPAIALPADIALHRVDHDVTQPEALPQIINTV SAAARGAWIYHCYNAEFLFFPFSADRTLREMLTFVTEERRHSVMTHVIDLYARDLTTH PDAVDLEEAWFDSAGYFAIPRRDAAGAVLDRQVDICGGLRWRFQDHVPPASRRLDRAA LFRAAKGVVLGPDHRLSDPEYNTYACPWHHSVTAAICSFRAAKALRRNPGSRDAIATF HWSKSVRFTWQAQQLLDLGMMEPGQWF" gene 222264..223574 /locus_tag="SKA53_01146" CDS 222264..223574 /locus_tag="SKA53_01146" /note="COG0621 2-methylthioadenine synthetase" /codon_start=1 /transl_table=11 /product="tRNA-i(6)A37 thiotransferase enzyme MiaB" /db_xref="CDD:10491" /translation="MTAPKKLFIKTYGCQMNVYDSERMAEALGGQGYVQTDHAEDADM ILLNTCHIREKAAEKVYSELGRMKVLKDAKPDLKIGVAGCVAQAEGAEIMRRQPMVDL VVGPQSYHRLPAMDAAVQGGAKALDTDFPEDDKFKTLKTRSKAKRGPTAFLTVQEGCD KFCAFCVVPYTRGAEVSRPADRILREARELVDAGVRELTLLGQNVNAYHGHERGLAGL IWALTEIDGLERIRFTTSHPNDMDQALIDAHGTCEKLMPYLHLPVQSGSDRILKAMNR KHTAESYLRLIDRIRAARPDILLSGDFIVGFPGETDQDFEDTLQLVRDVHYGQAYSFK YSTRPGTPAAEKPQLPDDVMNERLQRLQALLRDQQQQTQASMIGREVKVLFEKAGREA GQMIGKSEYLHAVYADAPATVLGQVRRVRIVQDSANSLKGELIG" gene 223698..224702 /locus_tag="SKA53_01151" CDS 223698..224702 /locus_tag="SKA53_01151" /note="COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase" /codon_start=1 /transl_table=11 /product="PhoH family protein" /db_xref="CDD:11413" /translation="MATGALTPPADDITESVLEFPDNFLLIDLCGEYDRNLTTIEDKL SVQILRRGNLLAVIGEQGPRHDALEVLKSLYQRLEQGRSLEAGDIDRELRMGPAGAPG PVDQIELFKGEIARVEVKTRKKLVEPRTEAQKAYVKALFDHEMAFGIGPAGTGKTYLA VAVGVNMLINGHVDKIILSRPAVEAGEKLGYLPGDMKDKVDPYMQPLYDALNDFLPGK QAAKMMEEKVIEIAPLAFMRGRTLSNAFVVLDEAQNATTMQMKMFLTRLGQGSRMVIT GDRTQIDLPRGVNSGLWDAERLLKHIPKISFNYFTSKDVVRHPLVAAIIEAYEADDPK " gene 224699..225193 /locus_tag="SKA53_01156" CDS 224699..225193 /locus_tag="SKA53_01156" /note="COG0319 Predicted metal-dependent hydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10193" /translation="MSVDVVVEDLRWAAVDIDALAQQASDAVFDRLGLEPSVFEIAVL ACDDARIAALNADFRGKPAPTNVLSWPSDERAPAVAGEMPLPPDPVMDTELGDIAIAY DTCLREAEAAGSQFIHHCLHLLVHGTLHLLGFDHERDLDATLMEGLEVEILGKMGVDN PYRD" gene 225190..226113 /locus_tag="SKA53_01161" CDS 225190..226113 /locus_tag="SKA53_01161" /note="COG1253 Hemolysins and related proteins containing CBS domains" /codon_start=1 /transl_table=11 /product="hemolysin, putative" /db_xref="CDD:10970" /translation="MNGANRPTDKDTMGDQGDGSSSAAQSAQQNHKDERPGLLARFGL GFKPKVMNGETGEIAQGVSTPEPTVLGMLNLRRKRVEDVAVPKTDIVAVPLTITKDDL VNTFRDSGMTRLPVYDTTLDTPVGIANLKDFALRYGFNGGTADLDLRDMLRPLLFVPP SMPLGVLLQKMQAERIHMALVIDEYGGTDGLLTIEDLIEQVVGEIEDEHDIAEAKSWI MEKPGVYLAQARTDLEDFEAEIGMNLTDHDDIDEEEIDTLGGLVTMLSGHLPARGEVI QHPDGPEFEVVDADPRRIKRLRVRLNTTRDA" gene 226106..227587 /locus_tag="SKA53_01166" CDS 226106..227587 /locus_tag="SKA53_01166" /note="COG0815 Apolipoprotein N-acyltransferase" /codon_start=1 /transl_table=11 /product="apolipoprotein N-acyltransferase" /db_xref="CDD:10682" /translation="MLDNLPRWARFGVLFALGVGAALGQAPLDLWPAAIAALALLLVL HRDVASPRIAAGRVWFFGLGYFAFALRWIVEPFLVDAARHGWMAPFALIFMACGAALF WAVAGWIASRIAPRSQLMLALLLVAAEMTRSLVLTGFPWALLGHIWVPTWMAQASAIG GPHLLTGVTLVAALAVARIARPAWRSGAAALLALLLVAILLRPGAAPQIAVDAPMVRL VQPNAPQHQKWDAVYRDQFVNRLLELSGQGDRPDLIVWPETAVPYLLNEVIDDLRPLD EAARGAPLVFGVQRVDDAGRFYNALVVMAQGGRITATYDKQHLVPFGEYIPFGDLLGR FGIRGLAVADGGGFAAGTLPGPIAIPGIGLAVPLICYEGIFAEEIVAGPDRPRLLLLI TNDGWFGQAAGPHQHLAQARLRAIEQGLPMVRVGNTGISAMIDAQGRITAALPLGVDG ALDAPLPAVRAAPVYTALGDWPVGLLLLLGIAICAINRKRDSD" gene 227677..228858 /locus_tag="SKA53_01171" CDS 227677..228858 /locus_tag="SKA53_01171" /EC_number="2.5.1.6" /note="COG0192 S-adenosylmethionine synthetase" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine synthetase" /db_xref="CDD:10067" /translation="MARQDYIFTSESVSEGHPDKVCDRISDAVLDAFLAEEPQARVAC ETFATTNRVVIGGEVGLTDKSRLTEFMGRIEGIARDAIKDIGYEQDAFHHATCEITNL LHGQSAHIAQGVDAAEGKDEGAGDQGIMFGYATTETDALMPAPIQYAHAILRRLAEVR KSGQEPTLRPDAKSQVSVRYEGGKPVEVTSIVLSTQHQFESQTSADIRAIVEPYIREV LPAGFITEATKWWVNPTGTFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPT KVDRSAAYAARYLAKNVVAAGMADRCTIQLSYAIGVAQPLSIYADTHGTGEVDPVAIE RAVAQVMDLTPRGIREHLQLNRPIYARTSAYGHFGRAPDADGGFSWEKTDLVEALRRA V" gene 228928..229641 /locus_tag="SKA53_01176" CDS 228928..229641 /locus_tag="SKA53_01176" /EC_number="2.1.1.33" /note="COG0220 Predicted S-adenosylmethionine-dependent methyltransferase" /codon_start=1 /transl_table=11 /product="tRNA (guanine-N(7)-)-methyltransferase" /db_xref="CDD:10095" /translation="MTKTQHPSGAPWRNFYGRFRGKTIRASQHDYLENDLDPLSPGPV SWDANPDRLALDLGALFAGKDVWLEIGFGGGEHLVHMAQSYPGIGIIGAEPFINGVAM LLGKIRKAGVDNLAVHPGDVRDLFDVLPAQSISRVFLNYPDPWPKKRHHRRRFVTPEH LAPLHRVMKPGAVLRVATDIPDYVRQTLEEVPCQGFDWLAETPADWRKPWADWISTRY EQKALREGRVPHYLTFVRV" gene 229682..231103 /locus_tag="SKA53_01181" CDS 229682..231103 /locus_tag="SKA53_01181" /note="COG0128 5-enolpyruvylshikimate-3-phosphate synthase" /codon_start=1 /transl_table=11 /product="3-phosphoshikimate 1-carboxyvinyltransferase" /db_xref="CDD:28219" /translation="MGARDGPFARTAVSGGANTKEPFMSSHATPIPMMSSACGPLQGQ AHVPGDKSISHRSLILGAMCIGETRITGLLEGDDVLDTAKAMRAFGAEVTDHGGGQWS VRGVGVGGFAEPDHVIDCGNSGTGVRLIMGAMATTPITVTFTGDASLNGRPMGRVTDP LALFGTRAVGRAGGRLPMTLVGAAGPVPVRYVVPVPSAQVKSAVLLAGLNAPGQTVVI EKEATRDHTERMLQGFGATLTVEDTDEGRVITLTGQPELQPQDIVVPRDPSSAAFPVC AALIVPGSDVLVPNIGLNPTRAGLFTTLQEMGADLTFENLRSEGGEPVADLRARFSPD LRGITVPADRAASMIDEYPVLSVVAAFAQGVTDMPGVKELRVKESDRIDAMAQGLRAA GVTVDEGPDWWRVTGVGHGHVPGGVTVQSRLDHRIAMAFLVMGMAAQNPVIVDDAAPI TTSFPIFEPLMNDLGAQIARISA" gene 231100..231720 /locus_tag="SKA53_01186" CDS 231100..231720 /locus_tag="SKA53_01186" /note="COG0283 Cytidylate kinase" /codon_start=1 /transl_table=11 /product="cytidylate kinase" /db_xref="CDD:10157" /translation="MSFTVAIDGPAAAGKGTISKAVAVHFGFAHLDTGLLYRAVGAKV LAGADPVAAARALDPADLDGDALRTAEVAQAASRVATDPAVRDALTAFQRGFAARPGG AVLDGRDIGTVICPGAQVKLFVTASAACRAERRWKELQAQGSDMTLETVLADVQARDA RDAGRATAPLAAAADAVLIDTSDMSIADAVARTIAVIAAAQKSLQG" gene 231923..233581 /locus_tag="SKA53_01191" CDS 231923..233581 /locus_tag="SKA53_01191" /note="COG0539 Ribosomal protein S1" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S1" /db_xref="CDD:10410" /translation="MDEFEALLNESFEMDTPAEGSVVKGKVIAIEAGQAIIDVGYKME GRIDLKEFANPGEAPDIKVGDTVEVFLRQVENARGEAVISREMARREEAWDRLEKAYA DEERVDGAIFGRVKGGFTVDLGGAVAFLPGSQVDVRPVRDAGPLMNMKQPFQILKMDR RRGNIVVSRRAILEESRAEQRAEVIGNLTEGQEVDGVVKNITEYGAFVDLGGVDGLLH VTDMAWRRVNHPSEILAIGETIKVQVIKINKETHRISLGMKQLQEDPWDAVEAKFSLG SVHQGRVTNITDYGAFVELEAGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVMVLEI DSAKRRVSLGLKQTQRNPWEVFAETHPEGTEVEGEVKNITEFGLFIGLEGDIDGMVHL SDLTWDGRGEDVIGDFRKGDMVKAKVAEVDVEKERISLSIKALDSDPFADAIGGVKRG SIITVEVTKIEDGGIEVEYEGMKSFIRRSDLSRDRAEQRPERFGAGDKVDVRVTNIDS KTRKLGLSIKAREIAEEKEAVEQFGSSDSGASLGDILGAALKRD" gene 233855..234136 /locus_tag="SKA53_01196" CDS 233855..234136 /locus_tag="SKA53_01196" /note="COG0776 Bacterial nucleoid DNA-binding protein" /codon_start=1 /transl_table=11 /product="integration host factor beta subunit" /db_xref="CDD:25448" /translation="MIRSELIQKIADENPHLYQRDVEKIVNTIFDRITDAMAQGNRVE LRGFGAFSVKKRDPRLGRNPRTGEAVEVDEKHVPFFKTGKLLRDRLNGL" gene 234146..234502 /locus_tag="SKA53_01201" CDS 234146..234502 /locus_tag="SKA53_01201" /note="COG1455 Phosphotransferase system cellobiose-specific component IIC" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKTIRYAFWAIVALCLILIGLANRDPVTVRAMPVWLSDLLGLSP DVTLPLFVVIFIGVGAGLAIGFLWEWLREYRIRADGRAKSREVAALRQELQQMRIASV GAKSEDDVLALLEKTR" gene 234502..235143 /locus_tag="SKA53_01206" CDS 234502..235143 /locus_tag="SKA53_01206" /EC_number="5.3.1.24" /note="COG0135 Phosphoribosylanthranilate isomerase" /codon_start=1 /transl_table=11 /product="N-(5'-phosphoribosyl)anthranilate isomerase" /db_xref="CDD:10010" /translation="MSLPTRVKICGLRDAAMLDAAVQAGAAYVGLVFFEKSPRNVTLA QAAALAAMVPAGVAKVALVVNADDAELDALLAQVPVDILQLHGSESLARVTALKARYG LPVMKAVGVAGPDDLAALDAYAQVADLLLVDAKPPKGADLPGGNGLSFDWRLIAGRRW PVPWMLAGGLTPANVAQAVALTGAGQVDVSSGVESAPGVKDAALIAAFCAALR" gene 235204..236430 /locus_tag="SKA53_01211" CDS 235204..236430 /locus_tag="SKA53_01211" /EC_number="4.2.1.20" /note="COG0133 Tryptophan synthase beta chain" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit beta" /db_xref="CDD:10008" /translation="MANDLFNSFMTGPDENGRFGQFGGRFVSETLMPLILELEEQYEH AKTDPTFWAEMHDLWTHYVGRPSPLYHAERLTAHLGGAKIYMKRDELNHTGAHKINNV LGQIILARRMGKSRIIAETGAGQHGVATATVCAKFGLKCVVYMGAHDVERQAPNVFRM KLLGAEVVPVTSGRGTLKDAMNDALRDWVTNVRDTFYCIGTVAGPHPYPAMVRDFQAI IGQETKAQMQEAEGRLPDTLIAAIGGGSNAMGLFYPFLDDKDVNIIGVEAGGKGVNDK MEHCASLTGGRPGVLHGNRTYLLQDDVGQILEGFSISAGLDYPGIGPEHAWLHDIGRA KYVSITDVEALEAFQLSCALEGIIPALEPSHALAHVMKIAPDLPKDHLLVMNMCGRGD KDIFTVAKHLGFDMKA" gene 236592..237044 /locus_tag="SKA53_01216" CDS 236592..237044 /locus_tag="SKA53_01216" /note="COG3212 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKKFLLSTTAAIALASNALYAQSITDQIVSQLQAQGYESIEIEN GQTQIKVEAILNGRKLEVVYDALTGVILKEEASTADDDDTLRRGVRISSSDDDDFLDD DEDDNDDDDNDDDEDEDDNDDDDDDTDSDRDDDDDNDEDDNDDDDNDD" gene 237092..237568 /locus_tag="SKA53_01221" CDS 237092..237568 /locus_tag="SKA53_01221" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMIKQLMICFLLIGSPQIVAAQSVQDQIIAQLQQQGFTQIEVSR TWLGRVRIVSLRDDLQRELVFNPQTGEILRDFWQTINGDGLASPRIVDPFRDSGSGGG QSSGGGSSEGGGSSGGDSGSGGDDDDDDDGDDDDGDDDGDDDDGDDDDGDESDDDD" gene 237676..238092 /locus_tag="SKA53_01226" CDS 237676..238092 /locus_tag="SKA53_01226" /note="COG2771 DNA-binding HTH domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LuxR family" /db_xref="CDD:25324" /translation="MQIAGSVLGFSPVGWRLYELIEIGAAVGLLLGIVSGILVLRTTM ARNLRVEDQLRIASGAFMEVMNERFNGWGLTPAERDVALFAIKGMSTQEIAGLRGVSE GTIKAQTNAIYRKAGISGRAQLLSLFIEDMVADLPE" gene complement(238105..238488) /locus_tag="SKA53_01231" CDS complement(238105..238488) /locus_tag="SKA53_01231" /note="COG3651 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12974" /translation="MEKDPSFNVLGSTLATCSTAPMTGFFRNGTCDTCAADNGSHTVC AVMTAEFLAFSKYVGNDLSTPRPEFGFPGLKAGDGWCLCAGRFLQAHEEGCAPQVNLH ATHVRALDIVPIDVLRQYALPGDLG" gene complement(238493..239536) /locus_tag="SKA53_01236" CDS complement(238493..239536) /locus_tag="SKA53_01236" /note="COG4427 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13647" /translation="MTAIRAAFTAQAAACASLGSPFMAQLMRLCATQDWPAGAVSTRI HDWTGDLGPSGQSVPLRLAGALHALHLQGHARLAPVYPPQASDDATLWAAVADVLVSE QAAILRWLDSPPQTNEVRRSAVLIALGHWLADRFALPLRCSELGASAGLNLQWDDYAL ALGRQVFGPATPALTLSPDWTGALPPNTRPQVTARSGVDLTPLDPHAPNDALRLRAYL WPDQPDRQMLTQAAITTARTIVAKGDAIDWLPGQLDHHAGQTHLIYTTIAWQYFPTAV QDRGAAMIRAAGQSARDDAPLAWFGMEPDGTGPGAALTLRLWPGDLTFALGRADFHGR WVQWTPVQIDKKD" gene complement(239539..240204) /locus_tag="SKA53_01241" CDS complement(239539..240204) /locus_tag="SKA53_01241" /EC_number="3.1.1.29" /note="COG0193 Peptidyl-tRNA hydrolase" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /db_xref="CDD:25707" /translation="MKLLIGLGNPGAKYAQNRHNIGFMAMDRIAGDHGFSPWRAKFQG QISEGRIGPDKVALLKPETFMNLSGQSVGEAMRYLKLTPADLIVFHDEIDLAPGKVRL KTGGGHAGHNGLRSIHAHIGPDYDRVRLGVGHPGHKDAVPGYVLHDFAKADLDWLDDE MRGISDGIAHLVTGDGARFLNAIALRTAPPRSSTSTPKPEKPPAAEPDNRTAMARLMD KFR" gene complement(240300..240914) /locus_tag="SKA53_01246" CDS complement(240300..240914) /locus_tag="SKA53_01246" /note="COG1825 Ribosomal protein L25 (general stress protein Ctc)" /codon_start=1 /transl_table=11 /product="Ribosomal protein L25" /db_xref="CDD:11535" /translation="MAGQIPDLNAKVRAGTGKGAARQARRDGEVPGIVYGGGIDPQSI NIPFNYLLTTLRKGRFMSTLFNLKVEGQDDVRVVCRGVQRDVVKDLPIHIDLMRLKRT SRVNLFIPVEFINGDTCPGIKKGGVLTVVRNEVEMDVLAGDIPDHLTVDLANAQMGDV IHISDVTLPEGAKPVIDRNFVIANISAPRGLLASADEDEATDAA" gene 241148..242320 /locus_tag="SKA53_01251" CDS 241148..242320 /locus_tag="SKA53_01251" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="Major facilitator superfamily (MFS) transporter" /translation="MSIRSALILSRRPAVAFVVVGIFWGCFAAHVPVIKAQLGASDAL FGTLLLGSATGLVSAMWLAPKLDRWLGAQSMQAAIAALAFAWLLPSLITHPLIFAASM ALVGLASGLLDVVMNARVSELEATHKRPLMNANHAMFSVAYACSALIAGVTREAGMPP APVFAGFAVFALCLIPFVRMDVTYVSAEEGYAGRYPLWPILLCGGIVLIAFMSEATVE AWSALHVERTLGGGAAEGALGPAMLGLTMAFGRFSGQAVAERLREVHVLIGASILSAS GAVIAALAPTPVWAYVGFGILGLGVSVIGPMGLALVGKLVPPHLRTEAISRAAVIGFS GFFFAPTLMGLMSQAFGLRVAFLVVALLLLATLPLALLVARQKAHVPQEAIAPNQG" gene complement(242459..242659) /locus_tag="SKA53_01256" CDS complement(242459..242659) /locus_tag="SKA53_01256" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRMTNVLATAAAVAALSTTAFAGGMSPEVMEAPVAVVEAAPAGS SANSTLIIVGVLAALLIAAAAD" gene complement(242828..243991) /locus_tag="SKA53_01261" CDS complement(242828..243991) /locus_tag="SKA53_01261" /note="COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase, putative" /db_xref="CDD:7893" /translation="MPVITTIADLKRLHKRRTPKMFYDYAESGSWTEQTFRENTSDFD LIRLRQRIAVDMTNRTTQSQMIGQDVAMPVALAPVGLTGMQSADGEIKAAKAAEKFGV PFTLSTMSICSIEDVAENTTKPFWFQVYTLKDDDFMQRLFDRARAAGCSAIVITLDLQ ILGQRHKDLKNGLSAPPKFTLASMADLATKWGWGIEMLQTKRRFFGNIVGHAKGVSDP SSLSSWTAEAFDHALDWDRVAQLMKMWGGKVILKGILDADDARKAAALGADAIIVSNH GGRQLDGAVSSIRALPAILDAVGDKVEVHFDSGIRSGQDVLKALALGAKGTYIGRAYI NGLGAMGEAGVTRALEVIHKELDTTMALCGRRDIRTVDRDILLVPKDFEGSWQ" gene complement(244049..244840) /gene="trpA" /locus_tag="SKA53_01266" CDS complement(244049..244840) /gene="trpA" /locus_tag="SKA53_01266" /EC_number="4.2.1.20" /note="COG0159 Tryptophan synthase alpha chain" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit alpha" /db_xref="CDD:10034" /translation="MSRIDAKFAQLRTEGRKAFVAYVMAGDPDYATGLEIVKGLPAAG VDIIELGMPFTDPMADGNTIQLAGQRALAAGQTLEKTLDYARALRETDNTTPIVMMGY YNPIYSRGVDAFLADAVAAGIDGLIIVDLPPEEDDELCIPAQKAGINFIRLATPTTDD KRLPKVLENTSGFVYYVSMTGITGTAAVQTTEVAPEVARIKAKTDLPVIVGFGIKTPQ AARAVAAVADGAVVGSAIVDRIARGDSVAEVLAFVAELAQGTHAA" gene 244969..246066 /locus_tag="SKA53_01271" CDS 244969..246066 /locus_tag="SKA53_01271" /note="COG0012 Predicted GTPase, probable translation factor" /codon_start=1 /transl_table=11 /product="GTP-binding protein YchF" /db_xref="CDD:9888" /translation="MGFKMGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGD VAVPDARLDKLAAIAGSKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRECDAIA HVLRCFEDDDITHVEGRVDPVEDAATIETELMLADLESIEKRLANLMRKVKGGDKDAV QQVRLLEAAQAALEQGKPARTVAVDADDAKAWRLLQLLTIKPVLYVCNVEENSAGSGN SQSARVAEMAAAEGNSSVVISARIEEEISQLDAEEATMFLDEMGLEEPGLDRLIRAGY ALLHLQTYFTVGPKEARAWTIKAGTSAPQAAGVIHGDFERGFIRAETIAYDDFVGLGG EQPAKEAGKMRAEGKTYTVKDGDVLHFLFNT" gene complement(246071..247198) /locus_tag="SKA53_01276" CDS complement(246071..247198) /locus_tag="SKA53_01276" /note="COG3754 Lipopolysaccharide biosynthesis protein" /codon_start=1 /transl_table=11 /product="possible glycosyltransferase" /db_xref="CDD:16340" /translation="MKQIEGWKVGRELLRLRRQLVTLPQTLIGYLDLLFAPARRRQHQ ANFASRVQMHDGACPAGKQIAIYLVYQPQGLAPSSLALCRDLVDNGFAPFVVLNAPLS DADLSALQAHTWKIMQRPNFGYDFGGYQDALLTLRNLVPDANAAIIMNDSIWLNMDQA LIAMLQSAPTAVVGLVQESKLRTDHKNNLTVDLQNLQSYFYFIQKGFWQDPQFWRFWQ DYMMVSSKKRTITAGELGFTRHLVANDIPHQALISKMQFLDQIKTKNSKYLGFVLRYA VYTNPHLAAERDALMAWHDPSNTWQKAAQAHIRQTLIQEPLNGSFWVAACDMFGITVI KKNKDALPEQMRKAFLAAHQDGAIALSPDIAAEIAASLRRD" gene 247359..248333 /locus_tag="SKA53_01281" CDS 247359..248333 /locus_tag="SKA53_01281" /note="COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases" /codon_start=1 /transl_table=11 /product="Hypothetical protein of glycosyl transferase family" /db_xref="CDD:25768" /translation="MTIEIKAENRPQKFRQSVIFCADQSYLPFASLAIHTLLRNNPVR DYDICIASVDALVPPTELKDHDIRFCQIDVGNAFDGMPVSKRFSLAAYLRIALPEAFA GQYDRIFYLDADVFVVGDAIDAVFRLDMLSCPVGAVTDITKLKHPNKPTFDQKALGVD GPYFNSGVMLFDVERFITMRVRERCAEAAKFYQGEPIYFDQTLLNIVLQKEWAQLNLG WNWQWPFSRSLFECFIDVQIVHFIGDDKPWSDHKRRLPLKYRETARRFFQKFYPELAQ KIPAADAALRNGALYHYFFRHITKIHLFTKCFNRHCGDLSKVLPPDLR" gene complement(248330..249100) /locus_tag="SKA53_01286" CDS complement(248330..249100) /locus_tag="SKA53_01286" /note="COG3306 Glycosyltransferase involved in LPS biosynthesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25814" /translation="MAELTRADLGIWLINLDRDTSRLARMQQQLDAMGLDYTRFGAID GRARADELAPRVNAAAYARNMGQAVSPGHIGCYASHVAVWDQVAQATQPVALILEDDV VFHDDFLDSLDAALAGAAAWDTLRFNCIRAKWPVCQGYLGRYRLNAYIGPFTGNATYL VKRDVAGRLAPAFWPQTRAHDHEMNRFFHHDFRQFGLEPFSSHVDDGGVSTITGTGFD QVRKFAWYRRLPHYRLKAGNYLRRAWWLARNGCLWRRA" gene complement(249093..250124) /locus_tag="SKA53_01291" CDS complement(249093..250124) /locus_tag="SKA53_01291" /note="COG2089 Sialic acid synthase" /codon_start=1 /transl_table=11 /product="polysialic acid capsule biosynthesis protein SiaC" /db_xref="CDD:11797" /translation="MDIAGRKIGPEHPPLVIAEIGINHGGDLAVAKEMVRLAALSGCE MVKHQTHIIADEMTEEARQIFPPNADVSIWEVMEACALSLDEEAELKRYTESLGMIWI STPFSRAAADFLQDLDVPAFKIGSGEADNLPLIRHIARMGKPVIMSTGMQSIESIRAS VAILDGAGVDYALLECTNLYPSPPEIVSLQGVTDLKNAFPRAVIGFSDHSIGPNMALA SVALGACILERHYTDSRYRKGPDIINSMDPAELRYLIDRSREIHTALRNPKQRTAAEE PVYRFARASVVADRDLPAGHVITEADIWARRPGSGEIAGYDFDKVLGRTTTRALPRNT QLKWSDLDG" gene 250252..250959 /locus_tag="SKA53_01296" CDS 250252..250959 /locus_tag="SKA53_01296" /note="COG2365 Protein tyrosine/serine phosphatase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12037" /translation="MFRKLQQMLEQKEQAFRNSFGHDITDPAERRRSQWHLDWLDHGI LRRRWHNFDLVAPGVYRSNHPNHSRFAAYAQMGIKTVLNLRGAALQPHHLFEVESCAT LGLTLVNVQMAARRAPDRDELLALLDAFATMERPFLMHCKSGADRTGLAAAIYLLHYQ DAPIAQAKRQLSFRYVHIRRTSTGILDHFLDVYAARTAQSPIGIADWIKTEYDRAALT RSFAVKQAALWPWQGWR" gene complement(251081..251788) /locus_tag="SKA53_01301" CDS complement(251081..251788) /locus_tag="SKA53_01301" /note="COG1083 CMP-N-acetylneuraminic acid synthetase" /codon_start=1 /transl_table=11 /product="acylneuraminate cytidylyltransferase" /db_xref="CDD:10805" /translation="MIIGHIGARAGSKGVPGKNFRLLHGKPLIDWSLDQLFACDRIDQ VVVSTDCPDIYAHAIKRGCLDIGLRPAELATDTAAKWHVWQHALAAVEKQTGPATTFL DLDCTSPLRLPKDIEAGLDLFAAEHPDMVMSCVESRKNPYFNILETDASGALHVSKPL PGGVVARQQAPQVYDHVGLVYVLRPDYLRAAQSLFEGRVIPLVLPVERGLDVDSPFDW DIIDFLMGQQIAQGLRG" gene 251787..251978 /locus_tag="SKA53_01306" CDS 251787..251978 /locus_tag="SKA53_01306" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLVFLVVIAAKGPCWRRVAILPASALAYNPACTLQALRAAIPAG LEGVWKQSIGLTHFNHLFA" gene 252126..253619 /locus_tag="SKA53_01311" CDS 252126..253619 /locus_tag="SKA53_01311" /note="COG0226 ABC-type phosphate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="OmpA domain protein" /db_xref="CDD:12236" /translation="MAQDVTISSKDKAVTITGTLVSFDDETYLLDTEIGQLRLSRLAT DCLGAACPQTIVTLDLDVAVTEAQTASLLQALVNGFAGLRGLSGLSMPDNTGVVARID MLNIQTNSAAGVVNVAVQGADATFVQLVQNDIDLALTKVPVPAAIAQSVVVAGGTDLR DLSRERVVALDALVPIVHPANTLRSVSLAELALVASGRITNWAELGGDNAPIRMLLPA QGGSVDTAFGELVLDPNRARLRANAERVSDDSAVAAAVMADPNAIAIATLANAGDAEI LPIRQTCGPLAYATDFAIKAEEYPLSRRVFAYAGDAVMSGTQAAFIDFMTSPAAQPMI QAVGYVDQSVVAQPISLQGTRMTAAILSASTGATLAAVQNLSRDLATADRLSTTFRFA SGSANLDNKALEDVQRMVDFLNSPAARNREILIIGFTDDVGRFDLNERLALLRAGSVR NALVTALGGDVLAGRTSVASYGPLAPVGCNDTADGRESNRRVEIWLR" gene 253749..254129 /locus_tag="SKA53_01316" CDS 253749..254129 /locus_tag="SKA53_01316" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13806" /translation="MVVAGQPARAQAGLSLSLVTDRPDAARGLVARLAAVSGGTIALN VTQRPSTDAAAFLQLVSSGAADIYLSATEAFVGSNPAFGIFSAMPGGMSPSELEGWMS AGDGRFPAGPAGYGTRHKGLYDRR" gene 254116..254745 /locus_tag="SKA53_01321" CDS 254116..254745 /locus_tag="SKA53_01321" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13806" /translation="MIGDDGPLPLWSKAPLTGLDDLTGAAVGSVGLGVHAMRALGVGT VVDIRAEAVDLASLDVFEGLSVAQMESAGLLASFAHMTTPNAGRRTAALSVGINLRTW NALSDAQKAIVERCIMAEHGLNRTISMHQSALTLQAAGAAINRHAMPTDIWDAQIAAA NQVMSDIFAASTLDADVAGGYLFFISDVAGWSEIGEAAFVAARKGALGQ" gene 254742..255896 /locus_tag="SKA53_01326" CDS 254742..255896 /locus_tag="SKA53_01326" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical extracellular solute-binding protein, family 7" /db_xref="CDD:13806" /translation="MTDAAKDKTMLNAPSTAKAMSRRRALLGCGAALTGAAALAAPAI AQGAPRILRLASSWPAGLGGLADSATRLAEQINIVSDGRYHIELYWPGELVPAFGVHD AVGAGEVDLYHSAEYYFQNKHRGFNFFTTVPLGLTTPEQTAWTKFGGGQALWDELNAR YNVKAIACGGTGIQMGGWFNKEILTTDDFEGLIMRLPGLGAQVLAAMGATAVSLPADG IVSALFEGSIDATEWVGPYNDLQFGFQKLLTTYIYPGFHEPGTMASFGMNLDLWNSLD ARDRALFETICDAELTSHTADFYGNNGIALVQLLAESGVQPTRLPDDVWNELSRVSFD VTASVANDDDLGRRIVESYEAYRALVNGAGAISQTEYFARRGAVDLFADL" gene complement(255949..257661) /locus_tag="SKA53_01331" CDS complement(255949..257661) /locus_tag="SKA53_01331" /note="COG0143 Methionyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="methionyl-tRNA synthetase" /db_xref="CDD:10018" /translation="MARHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRKRGHEVL FLCATDEHGTPAELAAAKAGKPVAAYCAEMHAVQARIADGFGLSFDHFGRSSSPQNHK LTQAMAGRLAEMGLIREVTEDQVYSVTDGRFLPDRYIEGTCPNCGFDSARGDQCDNCT KQLDPTDLINPRSTISGATDLEVRTTKHLYLRQSELKAALADWIDSKKDWPILTTSIA KKWLNDGDGLQDRGITRDLDWGIPVRKGDQDWPGMEGKVFYVWFDAPIEYIACAQEWQ DAGKGNDWERWWRTDKGAGDVRYTQFMGKDNVPFHTLSFPATIMGTQQPWKLVDYIKS FNYLNYDGGQFSTSRGRGVFMDQALDILPSDYWRWWLLSHAPETSDAEFTWDAFQQDV NKDLADVLGNFVSRITKFCRSKFSETIPAGGEHGAPEHALIAALTQRLTAYQGHMDAI EVRKAAAELRAIWVLGNEYLQANAPWTTIKTDPDMAAMQVRLGLNLIRLYAVLSAPFI PDASKLLLEAMQTDDADWPDDIGAALTALPAGHAFSVPDNLFRKITDDERADWAERFA GVRT" gene 257633..258262 /locus_tag="SKA53_01336" CDS 257633..258262 /locus_tag="SKA53_01336" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAEVIRWRAMRRPCKVSPLHNHVTQQTPDARHLLRRSILGFTQS SQTIFNKRLPSMRLLAAVVTALTLANPLHALEGYGAIGGDYALPHAGSSDMLISVLGG VTTADAPLAFGAEAEFGLALGASSDFNTRRLRGVARYDFGTVTAFGAAGVDQFVYDNV TDTGLSLGLGGEFELQGNMALRGEFIRSFIRDGDTENTTTTRLGLVYRF" gene 258277..259317 /locus_tag="SKA53_01341" CDS 258277..259317 /locus_tag="SKA53_01341" /note="COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="oxidoreductase, aldo/keto reductase family" /db_xref="CDD:10536" /translation="MQKIALGGSDIMVTDCCLGTMTFGNQTDRADAYAQIDMALDAGI NFLDTAEMYPVNPIRAETVGLSETIVGEWIAKTGRRSEVVIATKVSGNNPGWVREGYG YDGAVIRQTVDASLRRLQTDVIDLYQMHWPERGSYAFRQNWTYDPSGQDRQQTMDHML DVLSALDDCVKAGKIRAIGMSNESAWGMTKWIDQATAAGLPRMVSVQNEYSLLFRLYD TDMAEMAVNEDVTLLAYSPLACGLLTGKYQHDVPAGSRLSINGNLGGRMTPRTLPVTQ VYLDLARDHGVDPVHMAMAWQATRPFPVSAIFGATNTGQLAHILAGRDTMLTDELLAA IGAAHRAHPLPY" gene 259412..259942 /locus_tag="SKA53_01346" CDS 259412..259942 /locus_tag="SKA53_01346" /note="COG3040 Bacterial lipocalin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12379" /translation="MMAVLLAGCAGHPGEPRGALFEVYRDTSVPLSSKAVFEPARFLG TWYEVARYPVPFEAGCVGVTAEYGALPDGRISVRNTCRKPDGTVRSVIEGAADIVGPG RLKVRFASVPFVGADLWVLWADETYRTVVLGAPDGRSGWILNRDPVIPADRLAAARAM LAFNGYDLGRLMLVQP" gene complement(259899..260798) /locus_tag="SKA53_01351" CDS complement(259899..260798) /locus_tag="SKA53_01351" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA binding protein, putative" /db_xref="CDD:16530" /translation="MMRKIDKRDRARLFRDRLVAAMDRTGIKQAALARWTGVDRSTLS QLLKDQGARLPNAQLVAECSAALGVSADWLLGLSDFPEQAAALVAAAISMPEASRAMG DDQIFAWHQEAAGYKIRHVPSGLPDMLKTTDMLRWEYAPAVGKTIEQAIGASADRLGW MQQSKSDYEIALPLSELDSFARGQGYYAGLPVDVRQDQLRRFRDLHDQLYPALRLHLF DKRAVYSAPVTVFGPLLAVIYLGRNYIAFRDTERVTAITRHFDMLVRGSKIGQGDMAA HFDALIRLAATAEPASDGPDHSR" gene 260881..261759 /locus_tag="SKA53_01356" CDS 260881..261759 /locus_tag="SKA53_01356" /note="COG3239 Fatty acid desaturase" /codon_start=1 /transl_table=11 /product="fatty acid desaturase family protein" /translation="MKTRAFSRIAWPTLCLILGCYTVWGAALWLLPLPLGVIVAGLAI ALHSSLQHEAIHGHPFGVQWINDLLVWPPLTLVIPYARFAATHRAHHHDAVITDPYDD PESNYLDPAVWDRLPRILQVVLGWNNTLAGRLLLGPLLGTVGFGICEWRQGTAALGRA WLLHLLVMVAMLALVAASPMPVWAYLLAAYLGLSLLKLRTFLEHQAHARASGRSVIIE DRGPLAFLFLNNNLHVVHHMHPDVPWYALPGVYRARKDHYLRRNGGYLFRSYGQIFRL YLWRAKDPVPHPLWPR" gene complement(261756..262427) /locus_tag="SKA53_01361" CDS complement(261756..262427) /locus_tag="SKA53_01361" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family" /db_xref="CDD:25476" /translation="MTVLRDAATIIVLRDAATRPAVLMGQRGASMAFMPGKFVFPGGA VDPNDSRIPLPDLSPRDHARLQADSALAPDSLAAAAIRELWEETGQILGAPAQWPDPP QGWRGFAATGHRPNGAALQFFFRAVTPVGAPRRFDARFFLANAADLVTDPDDFTRAED ELANLQWVALDQARSFDLPFITQVVLAELMGHIRRGGDLADVPFFRNDDEAHLVSRLG GRSPL" gene complement(262424..262819) /locus_tag="SKA53_01366" CDS complement(262424..262819) /locus_tag="SKA53_01366" /note="COG1405 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDTSTTSYAAERPTKPAIMNGLRCRCPNCGQGKLFDHYLHVAD TCSQCGEDLSHHRADDGPAYLVILLVAHIIGFAIHFMWVAWRPDPWVMATVLSLGAVG LSLALLPPMKGMIVGIQWARRMHGFGLNS" gene 263004..263297 /locus_tag="SKA53_01371" CDS 263004..263297 /locus_tag="SKA53_01371" /EC_number="2.7.7.6" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma-70 factor" /translation="MKNGWIAAGLVATLALTAGGAFAQGHRAGPDFAAMDGDGDGAVT LAEFTAFTQDRAATRAERMFTRLDADGDGMVTQAEIEAAREAHGGRHGKSGRD" gene 263372..263965 /locus_tag="SKA53_01376" CDS 263372..263965 /locus_tag="SKA53_01376" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="sigma-24" /db_xref="CDD:11308" /translation="MMAVSDPFAHASDEDLLLAHASGDPRAAGALTQRVLPRVLAQAL RMLANRAEAEDVAQDAMLRLWRIAPDWRRGEAQVTTWLYRVVANLCTDRLRKRRHVAM DEIAEPLDSAPSVAAQMQTRARLRALSDALAQLPERQAQAVALRHLEGLSNPQIAEIM DISVASVESLTARGKRALSAIMAGRRAELGYDDDEPT" gene 263943..264290 /locus_tag="SKA53_01381" CDS 263943..264290 /locus_tag="SKA53_01381" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTMTNPPDDMLSDLFAQARKLTPMPDDALIARVLADAARPLPVR HPQPSVWAQLRAMIGGWPALGGLATATVAGIWIGIAPPPLVADYAAALLDEPVSLGLS PEEFMIAGEFSDG" gene 264283..264726 /locus_tag="SKA53_01386" CDS 264283..264726 /locus_tag="SKA53_01386" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MADLVQTRPSRIWRIVLVVSLALNLAVAGMIGGAVVSGRFGEHP SPRIDFGVGPVARAFSDDERRAIARALRADRSLRGDDFRGQMAAALRADPYDPAVTQA LIEDQAARLSQVQARARMVVLDRIAAMSPDRRRAFADRLDRDQRR" gene complement(264731..266059) /locus_tag="SKA53_01391" CDS complement(264731..266059) /locus_tag="SKA53_01391" /note="COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain" /codon_start=1 /transl_table=11 /product="two component diguanylate cyclase" /db_xref="CDD:13026" /translation="MLAAQFAVEACASSAEARAIIAKQCPDLILVNLSDPTEDRHGFC TALKADPDTSTIAIIAVGTADTSRARFAALDAGADDVLARPINDALLLARIRSLLRAR SVTEELLLRDSTSRALGFCENRDSLANTGRITVITPEAAPMPELIATLNAGLGHCVVV QTASAVLRHNDEVHCADLLIIPAANPRDEAVALFSLVSDLRSRVDTRLASLLVMVPNG NPEAAAMFLDLGADDVVMQNALPQEIILRAKALVRRKQLHDALRRNLLDGLQAAVTDP LTGLFNRRYADHHLARMSEQSAVAGSALAVMMIDIDHFKAINDTYGHAAGDRVLVALA ARLRDNLRAVDLVARIGGEEFLIAMPRTSARQAQGAADRLRRLVSQTPFDLGEAYAPI PVTVSVGVALSDEAGQTQPDTHLMCDLADAALYRAKSAGRDCVAMHLSAA" gene 266217..266495 /locus_tag="SKA53_01396" CDS 266217..266495 /locus_tag="SKA53_01396" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGPDQAQVIALQALGWMAGQDEICTTFLGASGASVDDLRDRAAE PAFQAAVLDFLTMDDNWVMAFCDAQGLAYDMPLRARYALPGAEQVHWT" gene 266486..267262 /locus_tag="SKA53_01401" CDS 266486..267262 /locus_tag="SKA53_01401" /note="COG0546 Predicted phosphatases" /codon_start=1 /transl_table=11 /product="putative phosphatase" /db_xref="CDD:10417" /translation="MDLTLDSRRAVRSGAGQTGKENTVIAGILFDKDGTLFDFNATWG AWTRAMLVAEAGDDPILCERLAAALGYDMENARFHQGSIVIASTVDVVADAIIGVLPG DVDKAALIGRMNAGSAQVAQVEAVPLRPFTSGLRQLGLTLGLVTNDAEAPALRHLDKA GIRSDFAFVAGYDSGFGAKPGPGQLIGFCRATGLAPDVCVMVGDSTHDLHAGRAAGML TVGVLTGPAPRAELAGLADIVLDSIADIPAWLRREKLIAD" gene 267344..268903 /locus_tag="SKA53_01406" CDS 267344..268903 /locus_tag="SKA53_01406" /note="COG5598 Trimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase family protein" /db_xref="CDD:25126" /translation="MQAEAKTKRRGGGRAGNAIRRGTASIDQMLWHLPVNTDRPTEPL TPEGVQAVHDGAMRILEDIGIEFLNQEALALFRQAGCIVNGTNVRMGRDWVMEMLAHA PARFDITPRNPERKITIGGNHILFGAVASPPNYHDLEIGRKVSGTRAQCANLLRLTQY FNCIHFSGGYPVEPVDVHASVRHLDVIYDKMILTDKVAHAYSLGRERIEDAMEMVRIA GGLTEDQFAAKPHMYTNINSTSPLKHDVPMIDGCLRCIRRGQAVIVTPFTLAGAMAPV TMAGAVTLSIAEALSTIALFQYVRPGAPCVIGTFTSNVDMKSGAPAFGTPEYMRATQM TGQMARFYDLPMRASGVCAANLADGQAMWETSNSLWSAVQSGTNLVYHAAGWLEGGLI ASPEKFIMDCEVVQMIQRYMDPMLTATGPDDIALDAIKDVGPGGHFFGTQHTQDRFEQ AFYQPFVSDWRNHEAWEAAGAIGTAERAHHLYKDILATFEAPPLDVAIKEELGDFVAR RKAEGGAPTDF" gene complement(268910..269917) /locus_tag="SKA53_01411" CDS complement(268910..269917) /locus_tag="SKA53_01411" /note="COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin" /codon_start=1 /transl_table=11 /product="zinc ABC transporter, periplasmic zinc-binding protein" /db_xref="CDD:27835" /translation="MIRFLSLCALAPTAVFAQVPQVMTDFAPVHSLTAQVMGDLGAPD VLLPAGADPHDYAMRPSDAAKLGAADLVFWTGPSLTPWLSDLLDTLAPSAAQVALLDV TGWDRLPIRDIQQFIMPAAEDDHGHDDHDDHKDDHDDHGHDDHGHDEHGHDDHGHDDH DHGDFDPHAWLDPTVAQVWLAAIADQLGTADPDNAATYTANADAAIARLTALDAELAA QLAPFAGLAYILPHDGYQYFEARYGLSAAGAIAGIDARTPGPAQVASLRDQMADSNIV CVLSDAEIGDRWATVVTEGTGARTAQIDGVGAGLDGGQALYEALLRRLADDFAACLGG A" gene 269987..270475 /locus_tag="SKA53_01416" CDS 269987..270475 /locus_tag="SKA53_01416" /note="COG0735 Fe2+/Zn2+ uptake regulation proteins" /codon_start=1 /transl_table=11 /product="Zinc-uptake regulator, Zur" /db_xref="CDD:10603" /translation="MSQDPMAFARHDHDSCISVALAAADTACAARKVRMTPVRRRVLE ILLESHSALGAYDVLARLDAEGLGSKPPVAYRALAFLVEQGFAHRIERLNAFIACMHP GAAHDPAFMICRKCGTVAEAQASSRSLTQAAAANGFQLEQTMIEAEGICPACQPDAAA CA" gene 270466..271212 /locus_tag="SKA53_01421" CDS 270466..271212 /locus_tag="SKA53_01421" /note="COG1121 ABC-type Mn/Zn transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="zinc ABC transporter, ATP-binding protein" /db_xref="CDD:10843" /translation="MRLIDARHIDFGHGGQKVLQNVSMSLDQGEIVTIVGPNGSGKST LLRLLIGALTPQKGSVTRAPGLRIGYVPQKLHIDPTLPITVARFLNLPKPVPAKAATE ALRTAGVAGLDHQQMSQLSGGQFQRVLLARAILANPHVLMLDEATQGLDQPGSAAFYR QIAAVRQDLGCAVLMVSHELHVVMSASDRVICLNGHICCEGTPEVVTAAPAYRELFGT GTGGALALYRHEHDHDHSHHHHHHHPEAAE" gene 271212..272009 /locus_tag="SKA53_01426" CDS 271212..272009 /locus_tag="SKA53_01426" /note="COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components" /codon_start=1 /transl_table=11 /product="zinc ABC transporter, permease protein" /db_xref="CDD:10830" /translation="MLDDFLLRAALAAVGTAVAAGLLGCFVVWRRMAYFGDATAHAAV LGVALALLFGTSITLGVGIVALCMAVLIHSLSGQAVAVDTILGVLAHGALALGLVAVT LVPGQRIDLDAYLFGDVLSVTRADLAVIWGGGVLLVGVLWWQWSAMLTATLNPDLAHA AGINPRRQQLILTVLVAAVVAVAIKVVGALLITALLIIPAASARSFASTPERMAFFAM AIGALSALGGLRLAVHFDTQVGPSIICVAVLIFAVSRVGKHLPRLPI" gene complement(272077..272514) /locus_tag="SKA53_01431" CDS complement(272077..272514) /locus_tag="SKA53_01431" /EC_number="3.1.-.-" /note="COG1490 D-Tyr-tRNAtyr deacylase" /codon_start=1 /transl_table=11 /product="D-tyrosyl-tRNA deacylase" /db_xref="CDD:25267" /translation="MRALVQRVSTASVSVDGAVIGQIGQGLLILVCAMAGDTPDASAS LAAKIAKLRIFKDADGKMNQSLLDTGGSALIVSQFTLAADTSRGNRPGFSAAASPDQG RALYDQFIADIGTLDIPTATGSFGADMAVALVNDGPVTIWLDV" gene complement(272511..273413) /locus_tag="SKA53_01436" CDS complement(272511..273413) /locus_tag="SKA53_01436" /note="COG0524 Sugar kinases, ribokinase family" /codon_start=1 /transl_table=11 /product="putative Fructokinase" /db_xref="CDD:28242" /translation="MILCCGEALIDMLPRQAGEEACFAPHAGGAVFNTAIALGRLGAP VQFFSGLSSDLFGTILRNQLHASGVDASPAAISDRPTTLAFVTLTNGHAAYAFYDENT AGRMLAPADLPDTRADAVFFGGISLVVEPCAAAYEALMLREAPRAVIMIDPNIRPGFI KDEPAYRARLDRMLARADIIKISDEDLAWITGNTDAVALRAATGAAVMLLTRGADGVT VITAAGSFDVPAVKADVVDTVGAGDTFSAGFLAYLDAQGLLTKSAIALADGDVLARAA AFGARVAAITVSRAGANPPWASEL" gene complement(273429..274523) /locus_tag="SKA53_01441" CDS complement(273429..274523) /locus_tag="SKA53_01441" /note="COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10916" /translation="MPPTTPVDHRFACDACGANMRFDPQTNQLVCQHCGTTQAMPQTN LTGSIKELDFKRALAQRLPQADLEITRIVACDSCGAQFEFDPDIHATQCPFCASPVVS DTGTHRHIKPAGLLPFALDESTAHKAMNDWLGRLWFAPNGLQDYARKGRQMTGIYVPY WTFDAATASRYTGQRGTHYYVTQTVMRNGKATQVRIRKTRWRAVSGQVARFFDDVLVL ASTSLPKRHTDGLEPWDLSAVEPYKPDYLAGFRAEGYQIALEDGFTQARGYMDRMIAR DVKYDIGGDDQRIGQIDTQISDVTFKHILLPIWLAAYKYRGQSYQFVVNGRTGRVQGE RPYSAWKIAFAVVIGVILAAGAGFVIANSQ" gene complement(274535..274957) /locus_tag="SKA53_01446" CDS complement(274535..274957) /locus_tag="SKA53_01446" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTQRRLTILLHWSMVMMLLAMIKGGSANEILRWAFVGAGTVWLA MTAMRGMLGKPGPKLQGTLRMAYPWMHRGLYGVMAASVAINAAALLGFASLDLAWNSL LVLLMVGTFHGLFHFWRHNVLYDNALRMMLPRFMHKIL" gene complement(274965..276056) /locus_tag="SKA53_01451" CDS complement(274965..276056) /locus_tag="SKA53_01451" /note="COG4260 Putative virion core protein (lumpy skin disease virus)" /codon_start=1 /transl_table=11 /product="Antifreeze protein, type I" /db_xref="CDD:13508" /translation="MSIFDFLSGQFIDVIHWTDNTRDTMVWRFERHGHEIKYGAKLTV REGQAAVFVHEGQLADVFTPGLYMLETNNMPVMTSLQHWDHGFKSPFKSEIYFVNTTR FSNLKWGTKNPIMLRDPEFGPTRLRAFGTYTVRVADPALFLREIVGTDGEFTMDEISY QIRNVIVQEFSRALAASGIPALDMAANTADLGKLVAGAIDPTLKNYGLSLPELYIENI SLPPAVEKALDARTSRGIAGNLDDHLKYKAAEAMATENAAAGQAMGMGMGAALGMQMA NPQTGPWGPVTPPPAPPPPVEHVWHIAEGGQVSGPYSKAAMGRKVTDGTLTRASMVWT QGQDGWMTAEDVTELAQLFTVMPPPPPGA" gene complement(276081..277034) /locus_tag="SKA53_01456" CDS complement(276081..277034) /locus_tag="SKA53_01456" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRTPARQSLALAIFAAVLAGCAAAPAPEPVTLPEPPIAGPDQPV LRDPSLTSRALMAHYANLQTQMLTQNLLRSDGGAADTPYTDTMLARNFAQIALATEYA DNSDFSVYRQGASTLRRWQQPIRMNVLFSDTVPLAQRDQDRTSVAAFAGRLSRLTGVP IRQSDDNPNFHVLFLDEDDRRAAAPLIRALVPNISGATLRGIINLPRDQLCLVAGVFP PGQSGYAQAVVVIRAEHPSLIRAACIHEELAQGMGLANDSDTARPSIFNDSEEFALLT RHDGLLLRILYDPRLAAGMPPATAAPIAADIARDLIAAGAS" gene complement(277038..278231) /locus_tag="SKA53_01461" CDS complement(277038..278231) /locus_tag="SKA53_01461" /note="COG3853 Uncharacterized protein involved in tellurite resistance" /codon_start=1 /transl_table=11 /product="tellurite resistance protein" /db_xref="CDD:24040" /translation="MSEFTREQAAKAVADVEKVTAVVLPDLPRDLIVLDSADAPTKTE ITRRMAEISIGDTNSIVSFGASAQTDLQAISQSMLAGVRNKDVGPAGDSLRNMVTTIR GFSVSELDVRRDRTWWEKLIGRAAPIAKFTARFEEVQGQIDKITDDLLRHEHVLLKDI ESLDMLYDKTLQFYTELGLYIAAGAAKLAELDATTIPAKEAEVAAAPEDAAMMKAQEL RDLRSARDDLERRVHDLKLTRQVTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWET QLAQAVTIQRSSEAAKAVRAANDLTNELLTANAQNLRDANKIIRTEMERGVFDINAVK AANANLIATINESLEIADEGKRKRAEAEAEMQKMEEELKQTLSAARARKTGGGDSIGI ATGRA" gene complement(278231..279124) /locus_tag="SKA53_01466" CDS complement(278231..279124) /locus_tag="SKA53_01466" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MARRFGGRFSPDAAAPQPRAAAVDPVRIKAAGSRGRLLYAPPIV LVVTSLGAGPAALVTALAGAGVLTLAAWLLQEGLRAQAAYDARKIARRPMLPRKILAS ALTGLGVALAALTGDSDIMGSALYGVAALALHVAAFGIDPLADKQVAGLDRFQQDRVA RVVDEAEAHLAQMTTTIASLNDRRLIARVAIFQQTARHMIATVEADPRDLTSVRRYLG VYLMGARDATAKFVALYRHTNDTTARAKYESLLTDLEQNFAARTEKILVDDHADMDIE INVLRDRLQREGVSLKTKGNE" gene complement(279124..279327) /locus_tag="SKA53_01471" CDS complement(279124..279327) /locus_tag="SKA53_01471" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLRLILLLSFVAVLALGFLAVLGAVRVMAGGAADKDPEPMPAPF RRISYIVLVVLMFGVTSGWLGSA" gene complement(279418..280236) /locus_tag="SKA53_01476" CDS complement(279418..280236) /locus_tag="SKA53_01476" /note="COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases" /codon_start=1 /transl_table=11 /product="RNA pseudouridylate synthase family protein" /db_xref="CDD:10905" /translation="MSNDTPQGDRIAKVLSRAGVASRRDAERMITEGRVSVNGKVITS PALNVTDADRIVVDGKAMRAPEAPRIWLYHKPAGLVTTERDEKDRPTVFASLPEDMPR VMSVGRLDLNSEGLLLLTNDGGVKRRLELPSTGWLRRYRVRINGSVSEARLEQLRAGI TVDGIRYQPMIVTFDRQQGANAWLTVSLREGKNREIRRAMEAIGVTVNRLIRVSYGPF QLGNLEAGAVEEVKGRVVRDQLGLSDKDLGKDSAKPTRVRKPVNRPVTGKKRQG" gene 280301..280747 /locus_tag="SKA53_01481" CDS 280301..280747 /locus_tag="SKA53_01481" /note="COG0590 Cytosine/adenosine deaminases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10460" /translation="MVFRSHMDIALTEARAAAARGEVPVGAVITQDGAIIAQAGNRTR ELNDPTAHAEMLAIRAACAALGQERLTGCDLYVTLEPCPMCAAAISNARIARLYYAAA DPKSGGVAQGPRIFTHPQCHHRPDVYDGISATAAEQLLRDFFAAKR" gene 280824..281477 /locus_tag="SKA53_01486" CDS 280824..281477 /locus_tag="SKA53_01486" /note="COG0628 Predicted permease" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MDWHSHIDAYCERIDPGFWSEPINALTNLAFLVAALWVWPRTAG LPLARALAAIVFAIGIGSLLFHTFATLWSALMDVVPIGAFILLYLFAVHRDVIGLGLW SALGATALFIPFAAIMVPLLGMLPFFGISAFYWTVPILLVIYALALRKTPQITRGFLT GAVLLALSISARSVDETLCNLLPFGTHFLWHVFNAVMLAWMILVYRRHMLAGAARDR" gene 281512..281799 /locus_tag="SKA53_01491" CDS 281512..281799 /locus_tag="SKA53_01491" /note="COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA(Gln) amidotransferase, C subunit" /db_xref="CDD:10590" /translation="MSIDTETARRVAKLARIEVAEEALPALASEFNAILGFIEQLNEV DVDGVEPMTSVTPQRLTRRADVVTDGNQQAAVLKNAPDAREGFFAVPKVVE" gene 281799..283280 /locus_tag="SKA53_01496" CDS 281799..283280 /locus_tag="SKA53_01496" /EC_number="6.3.5.-" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA amidotransferase subunit A" /db_xref="CDD:15348" /translation="MSDLTKLTIAGARDAMRKGDVTSAEITQACLTAIEGADALGAFV HKTPEIALAQAQAADARIKAGDAPAMCGIPLGIKDLFCTKGVPSQAASRILEGFKPEY ESTVTGKLFDAGAVMLGKLNMDEFAMGSSNETSVYGPAINPWKVDDRNLTPGGSSGGS ASAVAADLCLAATGTDTGGSIRQPAAFTGITGLKPTYGRVSRWGIVAFASSLDQAGPM TKDVRDCAIMLQAMCGHDARDSTSADLPVPDFEAALTGDIKGKTIGIPREYRMDGTPA EIEKLWSDGTAMLRDAGAKIVDISLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHR AKLGAGDGITQMYEKTRAEGFGPEVQRRVMVGTYVLSAGFYDAYYNRARRVRTLIKRD FDDAFAAGVDAILTPATPSAAFGIGEMADADPIKMYLNDVFTVTVNLAGLPGIAVPTG RDAQGLPLGLQLIGRPWEEAELLNIAYRLETAAGFVAKPAKWW" gene 283306..284034 /locus_tag="SKA53_01501" CDS 283306..284034 /locus_tag="SKA53_01501" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGVDGMKTGLLILVGALVLSACAQQQFDRPRGVGFDDLSNFDTD RARREAALAGAVDPFAPPPAVQSTPIGPVGGVIAASDLAAAGIGQGGTGAPLASSPAQ PGLVPQIATNTGISDEQDFDAVAGRETIESDAQRRQAAIAAQEQIAPQPLPERPAATG PNVVEYALTAPNAKGQEWYSRSLLSGQARFQRNCAAYATADDAQRDFLARGGPERDRL GIDPDGDGFACGWDPEPFRRAVQN" gene 284094..284711 /locus_tag="SKA53_01506" CDS 284094..284711 /locus_tag="SKA53_01506" /note="COG3023 Negative regulator of beta-lactamase expression" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase, family 2" /db_xref="CDD:12364" /translation="MVVIHYTAMASAAAACDTLCNPATQVSAHYLIVQDGTLLSLVPE DLRAWHAGAGRWGAVSDVNSHSIGIELANDGASPFAAPLMDALEDLLRAIMPRWDIPP ARVIGHSDMAPQRKIDPGPRFDWRRLALQGLSVWPEAGQADPAGFAAGMRAFGYTATD DPDLLLQCFRLRFRPWARGPLDATDAGLIADLARRFPVDAGGQAA" gene complement(284708..284983) /locus_tag="SKA53_01511" CDS complement(284708..284983) /locus_tag="SKA53_01511" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MISFAGSTPRAVPIWHCSRWGLPCRSGCPSRGGLLPHRFTFSPL YEVVCSLWRFPWGYPRRALPGTVLCGVRTFLEPMTGPQPSSHPRSAS" gene complement(285317..285727) /locus_tag="SKA53_01516" CDS complement(285317..285727) /locus_tag="SKA53_01516" /codon_start=1 /transl_table=11 /product="possible activator of photopigment and puc with BLUF domain" /db_xref="CDD:16235" /translation="MSLFRAIYTSQPFGFDETILSSILMQARKANARDDITGALICRA DIYLQWLEGPQDKVRDAIRRISHDDRHLEVTVHVAEPTDARVFGEWAMLHDPAKTWIW SQSDIAAGALDRTTPDEITGFFLRLAETAAVDSQ" gene 285977..286144 /locus_tag="SKA53_01521" CDS 285977..286144 /locus_tag="SKA53_01521" /note="COG0267 Ribosomal protein L33" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33" /db_xref="CDD:10142" /translation="MAKPTTIKIRLNSTAGTGHFYVTKKNARTMTEKMAIKKYDPVVR KHVEYKEGKIK" gene complement(286291..287082) /locus_tag="SKA53_01526" CDS complement(286291..287082) /locus_tag="SKA53_01526" /note="COG0670 Integral membrane protein, interacts with FtsH" /codon_start=1 /transl_table=11 /product="conserved hypothetical membrane protein" /db_xref="CDD:10539" /translation="MLTNDAAPGVAVFFLEGNMAQYDTIRTAGGVRTAAIDEGLRAHM SKVYGTMSVGMLITFAVAWAVGTAPALLGVFRDPITLQPNILGWIVMFAPLGMIFGFG AMINRFSAAAAQTFFYAFAAVMGLSIAWIFVAFTGMSIAQIFLITSIAFASLSLYGYT TKKDLSAWGTFLMMGVIGIVVAMIINLFLQSPAIMFAISILGVLIFAGLTAYDTQRIK TEYVAHAAHGDAEWLGKSAIMGALSLYLNFINMFMFLLQLFGNRE" gene complement(287180..287326) /locus_tag="SKA53_01531" CDS complement(287180..287326) /locus_tag="SKA53_01531" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQAAQLARQRRALAALDAHILCDIGITADDAQAEAGKPVWDVPR HWLA" gene 287325..287471 /locus_tag="SKA53_01536" CDS 287325..287471 /locus_tag="SKA53_01536" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIRDHKGGRRLVSMQIPACEKLAMTFPFLMNGVVYIVMLDMYWR TRYK" gene 287510..288379 /locus_tag="SKA53_01541" CDS 287510..288379 /locus_tag="SKA53_01541" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="Transcriptional regulator, LysR family" /db_xref="CDD:10453" /translation="MPRNLDLTALRSFVAVADTGGVTKAAGLLHLTQSAVSMQLKRLE ESLDAPLLDRAGRGIALTAQGEQLLSYARRMLVLNDEIYGRLTSNAYEGEVTLGVPHD IIYPVIPQVLRRFAAAYPRMRVQLSSSFTSTLLDEYRRGGIDMILTTEDSVGQDGETL TAIPLVWLGAPGGQIWKERPLRLAYEHRCIFRGFVQRQLDAAGISWEIAVESHSSRTI EATVSADLAVHTMLAGAEPRHFERIAHGGALPDLRDFNVNLYHADTDNPVIRDLAGFI RDGFYTLQAPAMA" gene complement(288369..289328) /locus_tag="SKA53_01546" CDS complement(288369..289328) /locus_tag="SKA53_01546" /note="COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="oxidoreductase, zinc-binding dehydrogenase family" /db_xref="CDD:10474" /translation="MRAFQVSSFTNPPALVDIAAPLPAPGEVLLDIAACGLNFADLLM AKGSYQDTPMPPFTLGMEVCGTVTALGDGVTTPAIGTRVAVFGGQGGMAEQGVFPANL CRPVPDSMSAEVAAGFMVAYGTSHLALTHRARLQQGETLLVLGAAGGVGLTAVEIGKA LGARVIAVARGADKLAVAQAAGADHVIDSDTQDIKAVVKALGGADVVYDPVGGDAFKA ALGACRPQARYVVIGFASGDVPQVPANILLVKNVDLIGFYWGGYLKFRPDLLSDSLAE LLGWLADSRLKPHISHVLPLAQAEKALDLMRSRASTGKVVITP" gene 289595..289966 /locus_tag="SKA53_01551" CDS 289595..289966 /locus_tag="SKA53_01551" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /db_xref="CDD:16530" /translation="MKHPVDVYVGKRIRHRRWMNGTTQQQLAENVGIKFQQIQKYETG MNRVSASRLWDISNVLGVPVSFFFEGYDAQPAVETRISDMPGDILTDKEALELLRSYY AIPENQRRRLFDLARVLSEAA" gene 290036..290833 /locus_tag="SKA53_01556" CDS 290036..290833 /locus_tag="SKA53_01556" /note="COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family" /codon_start=1 /transl_table=11 /product="Inositol monophosphatase family protein" /db_xref="CDD:27906" /translation="MDQATQADLIRVAHLLADTARPVTLAHFRTAALVADTKALSHFD PVTIADRAAEQAMRDVLARERPNDGIFGEEYGQTPGTSGLTWVLDPIDGTRGYISGTP TWGVLIAVGDADGPIYGIIDQPYIGERFAGGFGQADVTGPMGTAPLSTRAPRGLDQAI LLSTFPEIGTPAQMAAFQAVSRQVRLTRYGMDCYGYALLAAGQVDLVIEAGLNAYDVQ APIAVIEAAGGIVTDWCGAPVHAGGQVLAAANADIHAAALKILRSHP" gene complement(290866..292161) /locus_tag="SKA53_01561" CDS complement(290866..292161) /locus_tag="SKA53_01561" /note="COG0402 Cytosine deaminase and related metal-dependent hydrolases" /codon_start=1 /transl_table=11 /product="guanine deaminase" /db_xref="CDD:28164" /translation="MTKHLLLGQTLGFSGNPLAGDWADTVQYDPAGGVLIDAGRIVAM GDGAALRAAHPDARLVDYTGKLISAGFVDAHMHYPQTAIIASWGKQLIDWLNTYTFPQ EARLADPAYAAEIAMRTVDLAVAHGTTTLTSFCTIHPASVDAFFTAAAARDMAVVAGK TCMDRNAPDDLRDTAQAAYDDSAALIARWHGTGRASYAITPRFSPTSTPDQLAALGAL WAENPTCLMQTHLSEQLPEIAWVRDLFPQARDYLDTYEAFGLLGARGIYGHAIHLEPR EIARLAEVGAAVVHCPTSNTFIGSGLFDLMGLARAGLTIGLATDTGGGSSFSMLRVMA ATYEIGQLRGTALHPAQLMWLATEGSAQALHMTGQIGHLGVGAAADITVLDLASTPAI AQRSARADDIWDALFPTIMMGDDRAIADVWIAGVRQGVQ" gene 292261..293634 /locus_tag="SKA53_01566" CDS 292261..293634 /locus_tag="SKA53_01566" /note="COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)" /codon_start=1 /transl_table=11 /product="magnesium transporter" /db_xref="CDD:11945" /translation="MVDIDDDLDSEAFGITDRIVADVLNAVMQGDAAAIDALLDPLHP ADIAHLIEQIDSRERRDLLTLWQGGIDGDILSELDENLREEIIQQLRPDELATALRDL DSDDVVDLVEYLGEDQQEAVLDALDASDRVVVEQALSYPEESAGRHMQSELVRAPEHW TVGDAIDYLRADVVLPDQFYHIILVDPRLKAVGYVTLGRILSNARATPLRDLTEETFR TFHVAQGVEEVAQAINHYHLITAPVVDDDGRVVGVITIDDAMAFLEEEAEEDILRLAG VGEGSLSDNVFETTKQRFPWLAVNLLTAILASLVISLFEETIAGLVALAVLMPIVASM GGNAGTQSLTVAVRALATRDLTPSNVWRVIRREALVGMLNGLAFAAVMGVVGTIWFDA PMLGVVIAAAMVVNLLVAGLAGIGVPVVMDRFGIDPALASGTFVTTVTDVVGFFAFLG LASVMLL" gene 293631..294173 /locus_tag="SKA53_01571" CDS 293631..294173 /locus_tag="SKA53_01571" /note="COG0212 5-formyltetrahydrofolate cyclo-ligase" /codon_start=1 /transl_table=11 /product="5-formyltetrahydrofolate cyclo-ligase family protein" /db_xref="CDD:25825" /translation="MTFKSAARKAAFARRAAAHQPDAASAGHLSAVLAGYRGVPIAGY IAMRTEIDPTPAMAEASAHGPVGVPVITAKGQALRFRLWEPGCAMIAGDFGAQIPATG DWMIPQILIVPLVAFSRTGGRLGYGGGFYDRTLQQLRARGPVMAVGFAYGAQEDSDLP LEPTDQPLDMIVTEQGIITP" gene complement(294227..294976) /locus_tag="SKA53_01576" CDS complement(294227..294976) /locus_tag="SKA53_01576" /note="COG0217 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25808" /translation="MAGHSKWANIQHRKGRQDKLRSKLFSKLAKEITVAAKMGDPDPE KNPRLRLAVKEAKSNSCPKDVIDRAIKKSQGGDAENYDEIRYEGYGPGGIAVIVEAMT DNRNRTASTVRSTFTKNGGNLGETGSVAFMFDRMGEIVYPASVADADTVMMAAIEAGA EDVQSDDDNHVIYCADTDLAEVSGALEPALGESISTKLIWKPNMTTEVDAEGLTKLMK LLDTLEDDDDVQRVTANFEASDAVMAAFSES" gene complement(295038..296819) /locus_tag="SKA53_01581" CDS complement(295038..296819) /locus_tag="SKA53_01581" /note="COG0471 Di- and tricarboxylate transporters" /codon_start=1 /transl_table=11 /product="trkA domain protein" /db_xref="CDD:27800" /translation="MSDLITLTQSQQAWLTLAVLVGMFVLFLREIYPTEVVAMGGVSI LLVTGVLPYQAAVDTFSNPAPWTIAAMFIIVGALVRTGALDALTRLAERQARVSPARA IGGGLIFVALASAVMNNTPLVVVMIPVFIQLSRTLGVSASKLLIPLSYAAIVGGTLTL IGTSTNLLVDGVARASGMEPFGILEIMPVGVIVVIWTFIYMYFMAPRLLPDRHSMATM LSDRSKKKFFSEAVIPPESNLIGREVNGVQLFKRDGVRLIDVVRGDLSLRRDLANVTL QVGDRVILRTEMTELLSLQATKELRRVDQISAVETTTVEVLITPNCKMADRRLGSLRL RRRYAVYPLAVHRRDANVSQQIDDMVVRVGDTLLLEGAPADIQRLAEDMNLGDVSAPS QRAYRRGHAPVAIAVLLGIVVLAALNIAPILMLAMLGVTVVLMTGCIDADEAFSFIEG RLLALIFAMLGVGSALQSSGAVEMIANAASPYMMALPPFLVVLAVYVLASTLTEMVSN NAVAVVMTPIAIGLAAALGVDPRPLVVAVMIAASASFATPIGYQTNTLVFGPGGYKFT DFLRFGIPLNITLAPIVSFVIPLIWPL" gene complement(296812..297732) /locus_tag="SKA53_01586" CDS complement(296812..297732) /locus_tag="SKA53_01586" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNRDHGLLTLALVALGAGWGLTQPLTKITVTGGYEPFGIIFWQM LIGTLLLGGLRWRTLGRLPVTPRRLAFWLMIAALGTLIPNSSSYRAAFHLPAGVMSIV ISTIPLIAFPLALALGNDRFSWRRMAGLALGLIGVALIALPEASLPDRAMVAFLPLAL IAPFCYAVEGNIVAKWGTMGLDPVQVLFGASAIGVVIALPLALATDQLRVPAAPFILA DVTMLLGAVIHVVVYTGYIWLVRRGGAVFAGQISYLVTGFGVIWAMLLLRENYSLWVW AALAAMAVGLTLVRPRVAEAPVVGKALAHE" gene complement(297729..298544) /locus_tag="SKA53_01591" CDS complement(297729..298544) /locus_tag="SKA53_01591" /note="COG1692 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="Ser/Thr protein phosphatase family protein" /db_xref="CDD:11403" /translation="MKILFLGDVMGRSGRTAITTHLPRLRADWRLDFVVVNGENATSG MGLSAPHAKLLLEAGADVITLGDHAFDQKDMLAFAAQEPRIIRPLNFSKAAPGVGARV FNAMGGRKVLVAQALGQVFMKRPFDDPFSALDAVLRQYPMGGQVQASLIDIHCEATSE KMALGHFCDGRASIVVGTHTHVPTGDAMILGGGTAYQTDAGMCGDYNSVIGMDKAEPL RRFITGMPKDRFSPAEAEATLSGLYVETDDRTGKATRVVMVRQGGKLAPSGPA" gene 298629..299543 /locus_tag="SKA53_01596" CDS 298629..299543 /locus_tag="SKA53_01596" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:14136" /translation="MSDLQAARPLPNPVAGVLWMVLTGVMFVAVTAIVKHVGDDVPAA QAAFLRYVLGLVFLLPMIRPIMAARLTGRQIKMFAIRGVVHALAVILWFYAMARLPIA EVTAMNYLSPVYVSIGAALFLGEKLPPRRLIAVLLALVGAAIILRPGVKAVESGHIAM LGTAVLFAVGYLLAKRLSGEVSAAVVVGMLSITVTIGLAPFAYAVWVTPTIAQLGWLL LVAFFATAGHYTMTLAFAVAPLTVTQPVTFLQLVWAVVLGAVVFGEAVDGWVVVGGLV IMASVSFITWREAVARRHVTPVVTQTKV" gene complement(299620..300627) /locus_tag="SKA53_01601" CDS complement(299620..300627) /locus_tag="SKA53_01601" /note="COG4175 ABC-type proline/glycine betaine transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC glycine betaine/L-proline tranporter, ATPase subunit, ProV" /db_xref="CDD:13440" /translation="MNAVEFDNVSIVFGARPQTALPLMDEGLHRAEIMTRTDQVLGVH DCSLNVAQGEILVLMGLSGSGKSTLLRAVNGLNPVVRGAVRVNDGDHSYDVTHCNATD LRRLRQKSVSMVFQQFGLLPWRSVRDNVGLGLELAGLDKAKLRDRIDQELAMVGLSER ANAPVGELSGGMQQRVGLARAFATDAPILLMDEPFSALDPLIRTKLQDELLDLQKQRG RTIIFVSHDLDEAFKIGNRIAIMEGGRIVQCGTPRDIYTNPANGYVADFVAHMNPLGV LTARDVMIAGTADGPRIDVTTPVPSHLATNRHAAAASHENGQPVGQITQSSLITRLAP L" gene complement(300624..301457) /locus_tag="SKA53_01606" CDS complement(300624..301457) /locus_tag="SKA53_01606" /note="COG4176 ABC-type proline/glycine betaine transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC glycine betaine/L-proline transporter, inner membrane subunit" /db_xref="CDD:13441" /translation="MDWLTGTKIPVGAWAKSVFDAMNRNLGFVFDIISDAMEAMIDGI LWTLETPHPFIVIAVFAGLTWVMQRNWKTPLLIVLGFFFILNQGYWRETMQSLTLVLS ACVVCMGVGVPIGIAAAHRPKLYRAMVPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLI ATVIFVLPAPIRLTYLGVASTPTALLEAAQAFGATKRQILFKVELPSATPQIMAGLNQ TIMLSLSMVVIAALVGASGLGVPVVRALNTVNTSLGFESGFVIVVVAIMLDRMLRVKQ K" gene complement(301530..302453) /locus_tag="SKA53_01611" CDS complement(301530..302453) /locus_tag="SKA53_01611" /note="COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="putative glycine betaine-binding abc transporter protein" /db_xref="CDD:11821" /translation="MKLKSSLSALAIVAAMPAFAECDLVTFSDVGWTDITATTATTTV VLNALGYQTETKLLSVPVTYISLAEGDIDVFLGNWMPTMEADIAPYREAGTVDTVRAN LEGAKYTLAVNRAAADLGIATFADIVTHADALENKIYGIEPGNDGNRLIMDMIAADAF GLTGFEVVESSEQGMLAQVDRAAGRSEPVVFLGWEPHPMNANFDMVYLEGGDDWFGPN LGEATVYTNTTAGYAESCPNVGQLLNNLEFSLAMENEIMAAISDDGMAPDAAASAWLA ANPAVLDGWLNGVTTRDGGDGMAAVKTALGL" gene 302552..303121 /locus_tag="SKA53_01616" CDS 302552..303121 /locus_tag="SKA53_01616" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, BetI" /db_xref="CDD:7613" /translation="MEPIRRAALMQATIDEIGAVGNLDVTVSAIAKRAGMSSALAHHY FGGKEQIFLAAMRHVLRVYAAEVRAALRAVHGPHARIEAVIRAGFSSTNFQPDVIAAW LNFYVLAQTSQDANHLLRIYQRRLHSNLVHDLRPMIGDRAENAAMRIAGLIDGSYLRQ GLARGLGVASDATEQVLALLEMELKETVK" gene 303118..304626 /locus_tag="SKA53_01621" CDS 303118..304626 /locus_tag="SKA53_01621" /note="COG3119 Arylsulfatase A and related enzymes" /codon_start=1 /transl_table=11 /product="choline sulfatase" /db_xref="CDD:12458" /translation="MTKPNILIIMVDQLNGTLFPDGPADWLHAPNLKALAARSTRFAN SYTASPLCAPARAAFMSGQLPSRNGVYDNAAEFASSIPTYAHHLRRAGYQTCLSGKMH FVGPDQMHGFEERLTTDIYPADFGWTPDYRKPGERIDWWYHNMGSVTGSGVAEITNQM EYDDEVAYHATRKLYDLGRGHDARPWCLTVSFTHPHDPYVARRKYWDLYEDCAHLMPQ TGPIPYADQDPHSQRILDANDRDNFTISDDDIRRSRRAYFANISYLDDKIGEILQVLD DTRQEATILFVSDHGDMLGERGLWFKMCFYDGSSRVPLMIASPAMEPGLRKVPVSTID VTPTLCDLAGVDMSEVMPWTSGESLVPLGQGGTRDAPVAMEYAAEASQAPLVSLRYGK WKYNRCTLDPDQLFDMDADPHELTNLASHPAHQGTLTQLRAKAEARWDLARFDADVRQ SQACRWVVYEALRNGSYYPWDYQPLQKASERYMRTHMDLNVLEESQRFPRGE" gene 304670..306121 /locus_tag="SKA53_01626" CDS 304670..306121 /locus_tag="SKA53_01626" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="betaine aldehyde dehydrogenase" /db_xref="CDD:25427" /translation="MNTQPTASHFINGKYVEDTAGDLIEVIYPYTGQVIAKLHAATPA IVDQALDAARLAQQQWASWTGTERGRVLRRAADIMRERNHDLSMLETYDTGKPYSETS VADATSGADAFEYFGGLAGSITGAYIPLGDNFVYTRREPLGVCVGIGAWNYPTQIACW KGAPALACGNALVFKPSETTPLCALKVAEILIEAGVPAGVYNVIQGYGAVGAALVTDP RVDKVSLTGSVATGRKVYAAAAEGMRHVTMELGGKSPLVIFDDADLDAAVSGAILGNF YSSGQVCSNGTRVFVQKGIKPAFLARLSERLQGVVMGDPLDPATNYGPMVSAAQRDIV AGFIAKGQAEGARLVTGGTIPDGPGFFLPPTVFADVTDDMTIAREEIFGPVMSVLDFD TEQEVLARANDTPYGLAAGVFTADITRAHRMAAGFQAGTCYINTYNDAPVEAPFGGMK LSGVGRENSKAAIEHYSQIKSVYVRMDKCEAPF" gene 306121..307779 /locus_tag="SKA53_01631" CDS 306121..307779 /locus_tag="SKA53_01631" /EC_number="1.1.99.1" /note="COG2303 Choline dehydrogenase and related flavoproteins" /codon_start=1 /transl_table=11 /product="choline dehydrogenase" /db_xref="CDD:11983" /translation="MQADYVIVGAGSAGCAIAYRLAEAGKNVLIIEHGGSDRGPFIQM PAALSYPMNMKMYDWGLKSDPEPHLGGRQLVTPRGKVIGGSSSINGMIYVRGHARDFD HWADTGAQGWGYADVLPYFKRMEHWHDGGHGGDPAWRGTDGPLHITRGPRKNPLTRAF VAAGGQAGYQLTADYNGEQQEGFGPFDATIYKGHRWSAASAYLRPALTRPNCTLTRAL ARRVIIEDGRAVGVEVSRGKKVEVIRANVEVIIAASALNSPKLLMLSGIGPAAHLADH GIPVVADRPGVGQNLQDHLELYIQQAATKPVTLFAYWNLRGKARIGAEWLLWKTGLGS SNQFESAGFIRSRAGVDYPDIQFHFLPIAVSYDGKTAPEGHGFQAHVGPMRSASRGQV TLRSADPEANPRIQFNYMSDPQDWVDFRQCIRLTREIFAQPAFDDYRGHEIQPGDAAQ TDADLDAFIRDHAESAYHPCGTCKMGAVDDPMAVVDPQTRVIGVEGLRVADSSIFPRI TNGNLNAPSIMVGEKAADHILRRQPLPPANDQPWMHPDWQQSQR" gene 307852..308496 /locus_tag="SKA53_01636" CDS 307852..308496 /locus_tag="SKA53_01636" /note="COG1525 Micrococcal nuclease (thermonuclease) homologs" /codon_start=1 /transl_table=11 /product="nuclease (SNase-like)" /db_xref="CDD:7668" /translation="MLKVLILLGLVLAGAAHANPSGTLRVIDADTVDVGGLRVRLFGL DAPEIGQPCVLGGQTIDCGRWAGDLVRARFGGQDARCTTRDVDRYGRQVATCDVGGVD MGQVIVAEGWAVAYRRYSMIYDLDEKAAVLAARGLWAMTMDAPESFRAARNAAPAAPD LACNIKGNISGNGRIYHRPGNRDYDRTVIDEGRGERWFCSEADARAAGWRAARN" gene complement(308493..308942) /locus_tag="SKA53_01641" CDS complement(308493..308942) /locus_tag="SKA53_01641" /note="COG3427 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="carbon monoxide dehydrogenase operon G protein" /db_xref="CDD:25113" /translation="MELSGSRVIAADIDAVWAHLNNPDTLRACIPGCEELTGSPEEGF AATVKQKVGPVSATFKGEVTLENVIPGQSYTIVGEGKGGVAGFAKGSADVVLATVEGG TALTYNATAKVGGKLAQLGNRIIGGFAKKMADQFFERFQQTVEGTDA" gene complement(309110..310510) /locus_tag="SKA53_01646" CDS complement(309110..310510) /locus_tag="SKA53_01646" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /db_xref="CDD:13119" /translation="MAIQKLYAGAKLRELRGRLAMTQKAFADKLGVSLPYLNQMENNN RPVSTTVVLGLAQEFGFDVTELQSGDEARLVGDLREALADPVFTGSAPALADLRLVAA NAPALARAFLDLHRGYRQTHERLASLDEALGREDARLRPSPWEEVRDFFHYCDNYIDA VDRSAERMAGQCQPGESIAQAAIRILAATGIGVRYAASDTLRAFDPATNQLTLATAAH PATQTFQLLLQLALVTQAPLLDATLDLARFQSDEARSIAKVGLANYFAGAALMPYHAF LQAAQDNRHDLELLAARFGASLEQVAHRLSTLQRPGAKGIPFFFVRVDQAGTITKRHS ATTLQFARFGGACPLWNVHQAFELPGQFLRQLAETPDGARYFCLARDVSKSGGSYHAP TRRYAIGLGCEVRHAEAIVYADHMDITASDAYAPIGISCRICERRNCHQRSVPPLERH LRVDPNTRGLLPYQLD" gene complement(310562..311719) /locus_tag="SKA53_01651" CDS complement(310562..311719) /locus_tag="SKA53_01651" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="multidrug efflux pump, Major Facilitator Superfamily ( MFS)" /db_xref="CDD:12168" /translation="MTLILITGISALNMSIFLPSLAAMTAYFDTEYAVMQVSLSGYLA ATAVLQIFVGPLSDRFGRRPIVIGSLLIFVIATLGALFSTTVEAFLFFRILQAAVATC MVLGRAIVRDIVPDAQAASMIGYVTMGMALVPMVGPMIGGALEQAFDWHATFVFLVLA GIGTLALVYYDLGETLAKGGMGFRAQVRSYPELFRSPRFWGYVMCAAFASGAFFALLG GASFVGTTIFGLSPVWNGIALGAPAVGYAMGNFLSGRFSVRLGINKMALIGTGITIAG LGTSVLLTLAGLIHPLVFFGFCSFLGLGNGLILPNVMAGSISVRPHLAGTASGLGGAI MIGGGAALSQVAGSILTVESGTLPLQLIMLGTSMMAFLSVVFVVWREKQTA" gene 311980..313503 /locus_tag="SKA53_01656" CDS 311980..313503 /locus_tag="SKA53_01656" /note="COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)" /codon_start=1 /transl_table=11 /product="propionyl-CoA carboxylase, beta subunit" /db_xref="CDD:13933" /translation="MDILQELEDRRVDARLGGGEKRIAAQHAKGKLTARERIDLLLDE GSFEEFDMFVAHRCTDFGMEQDRPAGDGVVTGWGTINGRMVYVFSQDFTVMGGSVSET HGKKICKIMDLAMQNGAPVIGINDSGGARIQEGVASLAAYGDVFQRNITASGVVPQIS LIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVAKTVTNEIVTAEELGGASTHTR KSSVADGAFENDVEALAETRRLFDFLPLNNREQPPVRPFFDDVNRIEDSLDTLVPANP NTPYDMKELILKIADEGDFYEIQAEFAKNILTGFIRLEGSTVGVVANQPMVLAGCLDI DSSRKAARFVRFCDAFEIPVLTLVDVPGFLPGTSQEYGGVIKHGAKLLYAYGEATVPK VTVITRKAYGGAYVVMASKHLQADFNYAWPTSEIAVMGAKGATEIIHRGKSPEEIAAR TAEYEARFANPFVAAEKGFIDEVIMPHSTRKRICRAFASLRSKKTQMPWKKHDNIPL" gene 313520..313888 /locus_tag="SKA53_01661" CDS 313520..313888 /locus_tag="SKA53_01661" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MALPYMDKHRGFPGRLPGTDFQFVLRRANKDGATPLSQRIRYPD RRPADKRADAGFMQALWEAFGEDPFVRGNLDAGRLSWLFGREVIPAEDPFDPASYEAM LRIDVKVARQSFPDIPGLNE" gene 314214..314426 /locus_tag="SKA53_01666" CDS 314214..314426 /locus_tag="SKA53_01666" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQKKSIILAAFAAFALSGCLESDTERAVAGAGAGLVASELLGTD RAGTILAGAAAGVFCDDVGVCRPVRR" gene 314517..316514 /locus_tag="SKA53_01671" CDS 314517..316514 /locus_tag="SKA53_01671" /note="COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit" /codon_start=1 /transl_table=11 /product="propionyl-CoA carboxylase, alpha subunit" /db_xref="CDD:13908" /translation="MFKKILIANRGEIACRVIKTARKMGIQTVAIYSDADRHALHVKM ADEAVHIGPAPANQSYIVIDKVMAAIKATGAEAVHPGYGFLSENAKFAEALEAAGVAF IGPPKGAILAMGDKITSKKLAQEANVSTVPGYMGLIADADEAVKISNQVGYPVMIKAS AGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLADQH GNAVYLHERECSIQRRNQKVIEEAPSPFLDEATRKAMGEQSVALAQAVGYTSAGTVEF IVDGDRNFYFLEMNTRLQVEHPVTELITGIDLVEQMIRVAAGEHLPFVQSDLKINGWA MESRLYAEDPYRGFLPSIGRLTRYRPPVEEATPTRAVRNDTGVFEGGEISMFYDPMIA KLCTWGPDRASAIAEMRLALDAFEVEGIGHNLPFLAAVYDHEKFTSGTMTTAFIAEEF PDGFNGTTLPDDTCLQIAASAAAMHRVSEIRRARISGRMGNHERHVGEDWVVSMQGAH HRVHIAADKKGADVTIGANTMRVTSDWTPGQPLARLDVDGAPLVLKIGKISGGFRVRY RGADLKVHVRSPRQAELAALMPEKLPPDTSKVLLCPMPGLIVKIDVAVGDVVQEGQAL CTVEAMKMENILRAERKGVVAKINASAGDSLAVDDVIMAFE" gene complement(316519..316986) /locus_tag="SKA53_01676" CDS complement(316519..316986) /locus_tag="SKA53_01676" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKRLFFIALAALVAATSLPAAEPSVIARWQSDRTQVFDASEVSL PELQWIARAVVVFADSPNDPMFRQQMDLLLAEIDRLVERDVMLITDTDPAARNSVRLD LRPRGYALTVVGKDGRVLQRKPEPWSVRELTGSIDRTLLRQQEIEDRRGANIR" gene 317089..319215 /locus_tag="SKA53_01681" CDS 317089..319215 /locus_tag="SKA53_01681" /EC_number="5.4.99.2" /note="COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit" /codon_start=1 /transl_table=11 /product="methylmalonyl-CoA mutase" /db_xref="CDD:25799" /translation="MTDKKTWEKLATGELRGKPLDALTWHTLEGIPVQPLYTAEDTAD LPHLGGIPGQAPYTRGVKATMYAGRPWTIRQYAGFSTAEESNNFYRKALAAGQQGVSV AFDLATHRGYDSDHPRVEGDVGKAGVAIDSVEDMKILFDGIPLDKVSVSMTMNGAVIP ILANFIVAGEEQGHPRNVLSGTIQNDILKEFMVRNTYVYPPEPSMRIIADIIEYTTAE MPKFNSISISGYHMQEAGANLVQELAYTLADGREYVRAAIARGMDVDQFAGRLSFFFA IGMNFFMEVAKLRAARLLWSRIMAEFDPKDPKSSMLRTHCQTSGVSLQEQDPYNNVIR TAYEAMSAVLGGTQSLHTNALDEAIALPTEFSARIARNTQLILQEETGVTKVVDPLAG SYYVESLTHDLAEKAWELIEEVEQMGGMTKAVASGMPKLRIEETAAKRQAAIDRGTEV VVGVNKYRKDNEDPIDILDIDNEAVRLSQIARIDRTKAARDAAACEAALAELTRRAGD GGNLLEAAVVAARARATVGEISMAMEKVFGRHRAEVKTLAGVYGAAYEGDAGFAAIQA SVEAFAKEDGRRPRMLVVKMGQDGHDRGAKVIATAFADIGFDVDVGPLFQTPAEAAQD AIDNDVHVIGISSQAAGHKTLAPKLVQALKDAGADDIIVICGGVIPQQDYQFLYDSGV KAIFGPGTNIPKAAEDILHLIRAARG" gene 319281..319892 /locus_tag="SKA53_01686" CDS 319281..319892 /locus_tag="SKA53_01686" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLTLDHLAVVAEDLAAGTAWVEAALGVTMQPGGRHVRYGTHNTL LGLGDDLYLEVITKDPDAAPYDGPTWFGLDDFTGAPRLGNWICQTDDLDAMLCDAPSA VGVPRDLSRGDLAWRITVPDDGSKPYDGAYPTLIQWAQGTHHPARRLADSGCRLLQLS VTHPQADDLRAMLPLDDDRVVLRVGPAGFRAVFDTPQGRRSLG" gene 319911..320663 /locus_tag="SKA53_01691" CDS 319911..320663 /locus_tag="SKA53_01691" /note="COG1076 DnaJ-domain-containing proteins 1" /codon_start=1 /transl_table=11 /product="Putative heat shock protein DnaJ" /db_xref="CDD:10799" /translation="MQRKVATCAQVGFKIGHRFDQRTLMSIWTRIGEALAALANGEGL LAVFDRLRTPPDRSVAFTIAVIALGAKMAKADGLVTRTEVRAFREVFVIGPEEEDNAA RVFDLARQDVAGYDIYARRIKAMFGEHEGPLCDLLEGLFHIALADGSYHATEDAFLQE VAAIFGFDERRFQRIRAQFVPDAQRDPYAVLGVDPDAPMDRVRAAWGQLVRETHPDQM IARGVPPEAVKLAERRMVAINRAWEDIRAQRA" gene complement(320683..322230) /locus_tag="SKA53_01696" CDS complement(320683..322230) /locus_tag="SKA53_01696" /note="COG0248 Exopolyphosphatase" /codon_start=1 /transl_table=11 /product="phosphatase, Ppx/GppA family" /db_xref="CDD:10123" /translation="MNQQSEPDSIDWGPFGRPLFEDPAAQALARVGVVDVGSNSVRLV VFDGAARSPAYFYNEKIMCALGAGMSQTGHLNPEGRKRAVSAIRRFAALAKGMGIPPL TAVATAAVREATDGQDFRDEVLRETGVKLWVIDGREEARLSAQGVLLGWPGSYGLVCD IGGSSMELADLAEGKVGQRLTSALGPLKLREIKGGKKAIKAYVRATVQDLHRDMNFET GMRLFLVGGSWRAIARIDMERRSYPLTVLHEYRMSSRQISMTAEYIRTSDLTELRGRC HISDSRMSLVPLAAIVLKELMRTFKPKDVAVSSYGIREGMLYEQMPRALRERDPLIEA CRFAENKDARLPGFGRILYDFVKPLFPRANWQRKRIIKAACLLHDVSWRAHPDYRAEV TFDNATRANLGGLKHYERVLLGLALMNRYSSKTTSPRFDPLFAMLTPEQIKEAEILGK AMRLGAMLWLTADEQPGTLTWHRKAGALTLRLTEHARPLYGEVAEVRFNALANALNAT GTVKFGG" gene complement(322265..324433) /locus_tag="SKA53_01701" CDS complement(322265..324433) /locus_tag="SKA53_01701" /EC_number="2.7.4.1" /note="COG0855 Polyphosphate kinase" /codon_start=1 /transl_table=11 /product="polyphosphate kinase" /db_xref="CDD:4759" /translation="MNKANFLSSDFPAATALDMDVASSARFVNRELSWVGFNWRVLEE AENPRVPLLERLRFLSISATNLDEFYTVRVAGLRELAIAGNVTPALDGLTPAEQLVEI DREARALMTRQQVVYSALEAEMKDNGIAILSRMDVTKDDRDFLDNYFLDQVFPVLSPL AIDPAHPFPFLPNEGFALALQLERSADKRSLRALLPIPAQIARFISLPSATGHRFLPL EELLLLHIPRLFPGYQVKGNCGFKVLRDSDLELEEEAEDLVREFETALKRRRRGEVVR LKISANAPPALQTLIMSELHVSSDAVVEVDGLIGISDLGELVLDSRPDLLWPSFTPRV PERVQDHDGDMFAAIRQKDMLLHHPYETFDMVVRFLNQAAHDPDVVAIKQTLYRTSQK SPIVSALCEAAENGKSVTALVELKARFDEAANIRQSRRLERAGAHVVYGFVNYKTHAK ISTVVRREGDKLVTYTHFGTGNYHPITARIYTDLSFFTCDQDLGRDATKVFNYLSGYA QPEGLQNLSISPISLKQTLIDRIAAEGVNARAGKPAMIWAKMNSLVEPDVIDALYAAS QAGVKISLVIRGICGLRPGVKGLSDNIRVKSIVGRFLEHSRIVCFGNGAALPSKQAKV YISSADWMGRNLNRRVETLVDIRNPTVKAQIVSQIMAANMADVAQSWVMAPDGSFTRA TPTEGEFAFNCHRFFMENPSLSGRGSAGASDVPQLTHTDD" gene complement(324484..325146) /locus_tag="SKA53_01706" CDS complement(324484..325146) /locus_tag="SKA53_01706" /note="COG0593 ATPase involved in DNA replication initiation" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10463" /translation="MIARQLSFDWPNGVALGPDDFFVSTANATAFGMVTDPARWPLCK LVITGPAGCGKSHLARIFAAGQPTQIIAAADLTADFRPKAAALVVEDMDTLPSAAQEA MFHLHNHLHNNGGLLLLTARQTPRHWPITLPDLASRMQGSAVVQVADPDDALLQAVMM KLFADRQLLPPPDLAAYLAPRIERSFAAAAAIVAELDSMALATGHKISQRLAARLLDK PD" gene complement(325143..326246) /locus_tag="SKA53_01711" CDS complement(325143..326246) /locus_tag="SKA53_01711" /note="COG0628 Predicted permease" /codon_start=1 /transl_table=11 /product="Lipocalin-related protein and Bos/Can/Equ allergen" /db_xref="CDD:10498" /translation="MALPVKDQIKYWGIAMAVFLVVLWALGDVILPFVLGGAIAYLLD PVADRLQRAGLSRVLAVSIITLVAALVFILLILLVIPTLVKQTTALINTAPALFERLQ AGLTARFPDLIEPESTIRQQLQAIGETIQARGGELINGVLSSAMGLVNIIVLLVIVPV VAFYLLLDWDNMIAKIDSLLPRDHVATVRHLGSEIDRTLASFIRGQGTVCLILGTYYA LGLMLAGLNFGLIVGFIAGLITFIPYVGALVGGALALGLALFQFWGAVELADGDTVTY ATNWLRIGIVGAIFALGQFLEGNVLTPKLVGSSVGLHPVWLIFALSVFGSLFGFVGML VAVPVAAVIGVLIRYGLGQYRDSLLYQGQSKGR" gene 326405..327745 /locus_tag="SKA53_01716" CDS 326405..327745 /locus_tag="SKA53_01716" /EC_number="6.1.1.15" /note="COG0442 Prolyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="prolyl-tRNA synthetase" /db_xref="CDD:10316" /translation="MRLSRYFLPVLKETPREAQIVSHRYMLQAGMIKQASAGIYSWLP LGFKVLRKIENIVHQEQERAGHIAIQMPTIQSADLWRESGRYDAYGEEMLRIKDRGGR EMLFTPTAEELVTDIFRAHVTSYKDLPLTLYQIQWKFRDEVRPRFGVMRGREFYMKDG YNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGE SEVFYDSQITDLKFGDRQIDYSDHAACAAVLDEFTSRYARTDETHDAALFNQVPEERR RTARGIEVGQIFYFGTKYSDAMGALVDDGKGGKVPVHMGSHGIGVSRLLGAIIEASHD DKGIIWPEGVTPFHCGIVNLKQGDAEADAACQALYDSLTALGLEPLYDDRDERAGTKF GTMDMIGLPWRITVGPRGLKNGVVELTSRRTGESEELPPADAIARIAAIYQGIA" gene 327848..328036 /locus_tag="SKA53_01721" CDS 327848..328036 /locus_tag="SKA53_01721" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLIWIALAIWIIWKVFVIVGDMAERRGQDRFLWQVTAVFINPIS AMLLLWIFCRVKPGWHNR" gene 328089..329345 /locus_tag="SKA53_01726" CDS 328089..329345 /locus_tag="SKA53_01726" /note="COG4591 ABC-type transport system, involved in lipoprotein release, permease component" /codon_start=1 /transl_table=11 /product="lipoprotein releasing system transmembrane protein LolE" /db_xref="CDD:13754" /translation="MTTTRPFAKFEWMIAWRYIRAKRAEGGVSVMTWISLIGVTLAVF ALIATLAVRSGFRAEFIDTIVGADAHVTVLRPREVIADYADMSDRIMALPGVASVAPL VRGQAMAGAFGQIALADIYGIHLDDLKASEAIVDSERTIGNIDDLQGGIALGSALAAN LGLGLGDRIEITTRSGAATPMGQSTRRNAFDVVYIFSTGRYQIDEVRAYLPFDVAQTI FNRDGVADELDVRLDDINKSEALKQDIANAAGPNIWAYSWQDRVGRFLRALTIEDNVM FIILSILVLVASMNIISGLIMLVKNKGRDVGILRTMGLTEGSILRIFFICGAGIGTIG TALGVILGCLFAIYIDQIFSLVNYVAGGGVWDPSIRGIYNVPAELHVSDVLKAVSLSL GLSWIITIFPARRAARMNPVEALRYE" gene 329338..330018 /locus_tag="SKA53_01731" CDS 329338..330018 /locus_tag="SKA53_01731" /note="COG1136 ABC-type antimicrobial peptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC lipoprotein efflux transporter, ATPase subunit, LolD" /db_xref="CDD:10856" /translation="MNDILSLHDLHKTYNAGKPNEVRVLQGVNLTVAAGEIVALVAPS GAGKSTLLHIAGLLDTPDSGTVSIAGTDMTRLSDRKRTGVRRGQVGFIYQFHHLLPEF SALENIVLPQLANGVTDRAAHARAMALLTRVGIAERAAHRPAALSGGEQQRVAFCRAL ANEPALLLADEPTGNLDPDTSNRVFETLIGLVRDTGLAAVIATHNLELAARMDRQLRL DAGVLVAL" gene complement(330015..330449) /locus_tag="SKA53_01736" CDS complement(330015..330449) /locus_tag="SKA53_01736" /note="COG3238 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12575" /translation="MFHYALIMLVAGLGIPVLAALNAGLGRQIGSPAMAATVLFVVAF SVALIAALLTQPQAATRLASAPKYLFLAGTLVAFYILSITWIAPVIGVGNAVFFVLLG QLISAAAIDHFGLFAAQVTPLTGTRAAGIALMAAGVLLTQKV" gene 330544..330930 /locus_tag="SKA53_01741" CDS 330544..330930 /locus_tag="SKA53_01741" /note="COG2010 Cytochrome c, mono- and diheme variants" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12594" /translation="MRIIILGAFLALAACGDEQPIDGRSVYLDNCAACHGADGTGNGP MARDLGVTAPDLTQISARNGGTFPRDAVMSTIDGYQAGQHLSGAMPEFGAGDLGDTVI VENDGLGTPVPWKLLVLTDYLESLQR" gene complement(330959..331675) /locus_tag="SKA53_01746" CDS complement(330959..331675) /locus_tag="SKA53_01746" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26816" /translation="MRHLILALFLASPALAQQIETDLELVLLADASGSIDADELLFQR QSYATAITDPAVVMAIQNTLYGSIAVTYVEWASNQATVVDWTIIADMDSATAFADALI GPPRQASGSNAIGAALLYGMDQIEGNDITGLRRVIDFSGDTMANTLGPAITTSRDRVV AAGITINALPILRNNDFRSNSGLVNLYKQNIIGGPNAFVMPAMDGPAFTDAIRRKLIL EIAGTVPNTAIATALLQQIP" gene complement(331763..333721) /locus_tag="SKA53_01751" CDS complement(331763..333721) /locus_tag="SKA53_01751" /note="COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit B" /db_xref="CDD:10062" /translation="MADDLLSTTGPDDYNASSIEVLEGLEPVRKRPGMYIGGTDERAL HHLVAEVLDNSMDEAVAGHANRIEVELHADHSVTIRDNGRGIPVDPHPKFPDKSALEV ILCTLHAGGKFSGKAYQTSGGLHGVGASVVNALSDSMVVQVARNKELFEQRFSRGLPL GPIQKLGPTQNRRGTTVTFHADEQIFGSQKFKPARLYKSIQSKAYLFSGVEIRWKTEI NDGETPLEATFHFPGGLADYLKETLGKSATYADKPFAGSVDFADKFNEPGKVEWAINW TPVRDGFIQSYCNTVPTPEGGTHVAGFWNAILKGIKGYGELANNKKAALITREDLMSG GCALVSCFIREPAFVGQTKDRLSSEIAARMTEGAVRDHFDNWLAADTKSAGAILDFLV LRAEERLKRRQEKETARKSATKKLRLPGKLTDCTSKDRKGTELFIVEGDSAGGSGKGA RNRVNQALLPLKGKILNVLGAASNKLTTNQEINDLCEALGVGMGTKFNVDDLRYEKII IMTDADVDGAHIASLLMTFFFTQMRPLIDHGHLYLACPPLYRLTQGARRVYVADDAEK EKMMAKGLGGKGKIDVQRFKGLGEMDAKDLKETTMDPATRKLIRVTVHDDVPGDTADL VERLMGKKPELRFQYIQENARFVEELDV" gene 333773..334507 /locus_tag="SKA53_01756" CDS 333773..334507 /locus_tag="SKA53_01756" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKDPADGVCLALGAVAGFAQTGGTMTDNLTTIKALPDWRYLLAE FYELYRAIPAGGSDRIRSHQRQVREAINRVIKAHAPVQLQPAAQKPVTAHLRRALDQG RSGIMASTIRALDTLRTDLSWQYGYEKVPSALADSYAYAEIAGPNGPVVTSEIILGVV LFAPSCTYPAHAHQGITESYVCLSGAVSENHQGVYVPGSMIFNPPDHLHRITVGDREP ALLAYAWLGKPADLAGQKMVFSRPRK" gene 334540..335424 /locus_tag="SKA53_01761" CDS 334540..335424 /locus_tag="SKA53_01761" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="probable UDP-glucose 4-epimerase" /db_xref="CDD:10325" /translation="MRIFFTGGSGKAGKHAIAYLQAQGHIVVNIDLVPSGLDVSELLV DLTDAGQVIGAMSQYTDFHELDTGTGVPRFDAVVHFAAVPRVMIGTDAECFRINTQST YNVIEAAVKLGVPKVIFASSETTYGVCFAHGEVKPDYVPVDEDHPTVPHDSYAMSKVC NEATARSFQVRTGIDIYGLRINNVIEPHEYATNFPAFIADPAARRRNIFAYIDARDLG QMVDCCLKTDGLGYQVFNVSNDDLSVGITARQVIARFYQGVEQRGTLSENETMYSNAK AKRMVGFAPQHSWRDVLG" gene 335568..336215 /locus_tag="SKA53_01766" CDS 335568..336215 /locus_tag="SKA53_01766" /note="COG3683 ABC-type uncharacterized transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25099" /translation="MLRKLSVFPLLLPAPALAHPHVFVQVEMAVVFDVQGGVGVRLDW VYDAYFSMLVTADLGIDMDGDLQLTPEEQALLDTQIAAWPADFDGDLEVVQGDTILPL APKRDHAMVYADGIMRETHLRPLAQVADRSAPLTILPYDPTYYVAYSLAGPVTVEGRG DCTVDIIPANLDAAYSLVDELLYGRPASDVGPDEDFPEVGRSFADSVVVTCAGLL" gene 336197..337081 /locus_tag="SKA53_01771" CDS 336197..337081 /locus_tag="SKA53_01771" /note="COG2215 ABC-type uncharacterized transport system, permease component" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:11922" /translation="MRRFAVILLAVIGAGAVWLWGFGGAEQIMRQAAASQMQVQNAMA GALRALQQGDLAAVLTLWGLCFAYGFVHAAGPGHGKLVIGGYGLGARVPVGRLAGLAL ASSLAQAATAVVLVYGAVWALGWGRAQMTGLADDVLEPVSYALIAGVGLWLVLRGARH LRGLRRPVQAPDDICASCGHAHGPSVEQAAEVRSWRDAAAIIAAIAVRPCTGAVFLLI LTWRFGLDWAGIIGAFVMGLGTASITVLVAFAAVGFRETALQLVSNRGTARMMASAEI AAGALVMLLALQLVQRSI" gene 337124..337291 /locus_tag="SKA53_01776" CDS 337124..337291 /locus_tag="SKA53_01776" /note="COG0534 Na+-driven multidrug efflux pump" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /db_xref="CDD:10405" /translation="MQQIATTYPEHARAIWKLGIPLILSNMAQFAIHMTDTLMLGWYD VTALAAATIAT" gene 337292..338488 /locus_tag="SKA53_01781" CDS 337292..338488 /locus_tag="SKA53_01781" /note="COG0534 Na+-driven multidrug efflux pump" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /db_xref="CDD:10405" /translation="MFFVVFIVGAGFAQAITPLVAAANEQNDQVQVRRVTRMGLWLSI LYGVIVMLPFFWAEDILIAIGQAPIVAAEAHLYLQIVIWGMIPTLLVMALKSFLVALE HTAFILWATVGTAVLNGLVNYALIFGNWGAPELGIEGAAIASVMVNLLSVALLVGYIR RKLPRYELFRNFHRPDSEIMRRVYLLGWPIGLTSLAEGGLFSASAIMMGWIGPIELAA HGIAIQLASLTFMVHIGFSQAATVRAGRALGRRDEQGLRRGGITAIGLSAIYAAVTSA IFLLIPGLLVSVFIDPAEPDRLRLIEIGVLLVMIAGLFQLVDGLQVVVLGLLRGVQDT TVPMVMAAFSYWGVGLPASYLLAFHWGLGGVGIWLGLVLGLLVAAMLLMSRFWGRSVR ITPAQG" gene complement(338485..339249) /locus_tag="SKA53_01786" CDS complement(338485..339249) /locus_tag="SKA53_01786" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPSRSNAAPAHPALHHADAALRPESEAGRSRLNRKYTITCLAGV HIIETSIMAPAIPAIEDAFGALGRGTILQTRHGPVAVEDLLPGDSLRLIDGSFAPLLW RGMMTITPSDAGSVRHGLTRITADALGIGRPLQDLVLGPAARLYHATSNVAKLTGKTA AYIPAHDFVDGNQFIALRPAAPVDVYQLGFAAHETLMVNGIGVESLHPGTAFSLGLRG PVLAQYLALFPHLRRLDDIGLFRHPRLRLRDLEMRA" gene complement(339657..340412) /locus_tag="SKA53_01791" CDS complement(339657..340412) /locus_tag="SKA53_01791" /note="COG1496 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11210" /translation="MTLEIITDTALGATRHGFFTRKGGASSGVFSGLNCGFGSSDQSD IVAINRDRVAGALDLTADRLVGVHQVHSADVVTVTTAGPLVQKADALVTRTKGIALSV LTADCQPVLFCDAQAGVIGAAHAGWKGALAGVLEQTVHAMEQLGAARRNITAVIGPAI SQRNYEVGGDFRDRFVAADPGYERFFAAGAQGRFQFDLPGFGLMRLRACGIGQAHWTR HCTYADPLRFFSYRRSVHLQEADYGRLIAAIRL" gene complement(340409..341467) /locus_tag="SKA53_01796" CDS complement(340409..341467) /locus_tag="SKA53_01796" /note="COG1565 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:17183" /translation="MTTLADLLLTRIARDGPISIASFMTDALMHPAHGYYATRDPFGA AGDFITAPEISQMFGELIGLSLAQAWLDQGAPDPVTLAELGPGRGTLMADILRATAAV PGFHAAVTVHFVETSPHLRALQAERVPQATWHDRIDTLPDAPLLLVANEFFDALPIRQ FVRAGAGWRERMVGAQDGTLCFGLSDAAALAVLTPRLDDTQDGDLVEHCPALPGIVAA IAGRIATNGGAALVIDYGDWQSLGDTFQALAGHAPTDPLAAPGAADLTAHVDFAAIAA HAAPARHSRLTPQGVFLERLGITARALKLASGLTGEALDAHVAAHRRLTHPAEMGDLF KVMALYPATAMPPPGLDP" gene complement(341464..342345) /locus_tag="SKA53_01801" CDS complement(341464..342345) /locus_tag="SKA53_01801" /note="COG0682 Prolipoprotein diacylglyceryltransferase" /codon_start=1 /transl_table=11 /product="prolipoprotein diacylglyceryl transferase" /db_xref="CDD:24591" /translation="MFAAIPFPDISPEIFSIDLFGMTLALRWYAMGYIVGIALGWMLI KAALRRPHLWRNGAPMDPARLEDLLTYIVLGVIGGGRLGYVFLYQPAAFLADPVSIIR IWEGGLSFHGGFAGVVIAVWLFSRRQSVPLPDLADIIAVAATPAILLVRIANFINAEL WGRPTNVPWGVIFPGDAAQSCATATAPCVRHPSQLYEAGLEGLVLGAVLLLLAFRFGG LKKPWLLSGLFFAGYGMSRFIVEFVRQPDAQFVSLGNPLGWAVQFGDYGLTMGQVLTL PMIVIGLVVILATLRRR" gene 342448..342696 /locus_tag="SKA53_01806" CDS 342448..342696 /locus_tag="SKA53_01806" /note="COG2960 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15678" /translation="MQNRNKIFDDLSQLMTNAMGVAQGARDEAQTAMKSMMDRWLADR DFVTREEFDAVRAMAQKAREENEALSARIAALEAKKTK" gene complement(342830..343990) /locus_tag="SKA53_01811" CDS complement(342830..343990) /locus_tag="SKA53_01811" /note="COG1363 Cellulase M and related proteins" /codon_start=1 /transl_table=11 /product="endoglucanase" /db_xref="CDD:11079" /translation="MWQDWPPVKQFLGDNPAVTNISRSTIAKQRHTAQIAIIKGACRM NLDLLKRLCETPGVPGHEHRVRDLITSEIKGMFDAVTTDPMGSLLCRRDAKKKDAPRI MLLCHMDEIGFLVSHISKDGFLYLQPVGGFDPRNLFSRRVLVCTDQGDFKGVMNPGGK PIHISSAEDRKKVPEVTEFFVDLGMGKAACDKVKIGDFVVMDEPFIEMGNKVVSKALD NRIACWLGIEAIRALAKKGRGAEIHVAFTCQEEVGLRGARTAAYAIKPDIGLGIDVTL ACDTPGIPEKDATTTQGAGFGLHVRDSSFIADKALVAQIEALAIRKKIPYQRTMLAAG GQDGAAAQQAAAGARAVGIVVGTRYIHTVTEMIDKGDLQAALDILVAYLSEF" gene 344093..344596 /locus_tag="SKA53_01816" CDS 344093..344596 /locus_tag="SKA53_01816" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14549" /translation="MALSEHYFEADDLHPIDLVEHIAETHDWEFDRIHDDQIAMAVEG QWRTYSITLAWSAYDETLRLICTFEMDPPAARKPALYEALNAINDRLWAGSLTWWDEQ NLMVYRYGLVLAGDQVAGPDQIDTMIGAAVNACEQYYPAIQLVTWAEQTPKQALEIAI AGAYGRA" gene 344672..345487 /locus_tag="SKA53_01821" CDS 344672..345487 /locus_tag="SKA53_01821" /EC_number="1.5.1.2" /note="COG0345 Pyrroline-5-carboxylate reductase" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase" /db_xref="CDD:10219" /translation="MNMNEVAVRGLVLLGCGKMGSAMLAGWLRNGLPAASVWVIDPHP SDWLKQQGVHIGGTLPESPAIAVIAVKPQMMMTALPDVKSFGTGKTLIISIAAGTPIA TFEAVFGKDTPIIRAMPNTPAAIGRGITALIGNAKTADADLDLAEALLWAVGQTVRLE DESQMDAVTALSGSGPAYVFHMIEALAAAGVAQGLTPQMAMDLAKATVGGAGELAETA DEDPAQLRINVTSPNGTTQAALDVLMDKDKGLTDLMHRAVAAAANRARELASE" gene 345480..345818 /locus_tag="SKA53_01826" CDS 345480..345818 /locus_tag="SKA53_01826" /note="COG0073 EMAP domain" /codon_start=1 /transl_table=11 /product="chaperonin csaA" /db_xref="CDD:9948" /translation="MSEISFDDFLKVDVRVGIVTRAEPFPEARKPAIKLWIDFGPDIG EKKTSAQITVHYASETLVGKQVLAVVNFPPRQIGKFMSEVLVLGMPDAEGAIVLVGPD QDVPLGGRLH" gene 345815..346768 /locus_tag="SKA53_01831" CDS 345815..346768 /locus_tag="SKA53_01831" /note="COG1052 Lactate dehydrogenase and related dehydrogenases" /codon_start=1 /transl_table=11 /product="D-isomer specific 2-hydroxyacid dehydrogenase family protein" /db_xref="CDD:10777" /translation="MKKLLITRALPEATLAAARARFDVTLRPQTAGLTVAEAAAALRD YDAILPTLGDGFAAAAFTGEIRCGVLANFGVGYNHIDVAAARAAGVAVSNTPDAVTDA TADIGMTLILSACRRAGEGERLVRAGKWTGWQPTQMLGTHVTGKTVGIVGMGRIGQAV ARRCLYGFNMPVLYFNRSPKMVDMPARQVDSLHDLMGRADIIVVTVPGGGSNTGLIDA AALAAMKPTGIFVNIARGDVVDEDALIAALQKRQIAGAGLDVFAKEPIVPDALRALEN VVILPHLGTAALEVREAMGQMALDNVIAWDEGRALPQGLTS" gene complement(346904..348106) /locus_tag="SKA53_01836" CDS complement(346904..348106) /locus_tag="SKA53_01836" /EC_number="2.6.1.1" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase" /db_xref="CDD:10310" /translation="MAFLSATLDRVKPSPTIAVTTKAAELKAAGRDIIGLGAGEPDFD TPDNIKAAAVAAIAAGKTKYTAVDGIPELKQAICAKFKRDNALDYTPAQVTVGTGGKQ VLYNAFMATLNAGDEVIIPAPYWVSYPDMVLLAGGTPVTIEATLAADFKITADQLEAA ITPATKWFLFNSPSNPTGAGYSWDELKALTDVLLRHPHVWVMTDDMYEHLAYGNFKFC TPAQVEPRLYDRTLTVNGVSKAYAMTGWRIGYAAGPEMLIKAMRKVQSQSTSNPCSVS QYAAVEALNGTQDFLAPNNALFERRRDLVVDMLNQAPGVVCPRPEGAFYVYPSIAGCI GKTSAAGVLIDNDETFAAALLEETGVAVVFGAAFGLSPNFRVSYATSDAALEEACKRI VGFCKSLN" gene 348187..348579 /locus_tag="SKA53_01841" CDS 348187..348579 /locus_tag="SKA53_01841" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family" /db_xref="CDD:16530" /translation="MTETDSDWYSPEAATFGDRLAGAREAAGLSQKDLAKSLGVKFAT LVSWENDTGEPRANRLQMLAGMLGVSLGWLMTGLGDGLAAPDDATEIPANVAVLMQEM RRLRAQMVQTLDKMGQVEKQLQTALRRT" gene 348576..348860 /locus_tag="SKA53_01846" CDS 348576..348860 /locus_tag="SKA53_01846" /note="COG2938 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="TPR repeat family protein" /db_xref="CDD:12286" /translation="MMTETTEHTRKRLHMRSMRRGIKEMDLILPAFAAEHLADMDEAE LALYDALLSENDHDLYGWVGGQFAVPDVYADMISRIAAGAHGVTRPAAAH" gene 348918..349439 /locus_tag="SKA53_01851" CDS 348918..349439 /locus_tag="SKA53_01851" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /db_xref="CDD:24258" /translation="MSVHTNLGKQDKSGLTDARSASFMASYLDVLTLVERLHRLLLDV IKDEFERVGILEINAVQALLLFNIAENEVTAGELKSRGYYQGSNVSYNLKKLVELGYM HHQRSEIDRRSVRVRLTEKGRNVRLIVAKLFATHADGLLDRQVLDHAGLDEISSALRR VERYWSDQIRYIY" gene complement(349462..350028) /locus_tag="SKA53_01856" CDS complement(349462..350028) /locus_tag="SKA53_01856" /note="COG0346 Lactoylglutathione lyase and related lyases" /codon_start=1 /transl_table=11 /product="probable lactoylglutathione lyase" /db_xref="CDD:25648" /translation="MALLAAACAGYPARGCGTYRLFDRFGCFAPCPAALGWREDDRRI ATMTLTYLHTMVRVKDLEASMAFYALLGLRETRRIDNDKGRFSLVFMAPPGQEDCPVE LTYNWDGDAGLPSDSRHFGHLAYRTSDIYALCQHLMDNGVTINRPPRDGHMAFVRSPD NISIELLQEGDNLPPAEPWASMDNTGHW" gene complement(350219..351979) /locus_tag="SKA53_01861" CDS complement(350219..351979) /locus_tag="SKA53_01861" /note="COG0608 Single-stranded DNA-specific exonuclease" /codon_start=1 /transl_table=11 /product="probable single-stranded DNA-specific exonuclease" /db_xref="CDD:10478" /translation="MNIPQDHAFLGVAASLTGRRWVGPNAQEDRAAEAMVQATNLPPA LCRTLARRGVPSQEAALFLAPTLRDLLPDPRSLRDMEKAATRFLQAVAGRERIAVFAD YDVDGGASAALLIVWLRQRGLRATLYIPDRIDEGYGPNEPAMAELAAAHDLIICVDCG TLSHGPIAAAVRADVIVLDHHLGGETLPAAYAVVNPNRQDESGDLAHLCAAGVVFLML VEANRQLRDAGKAGPDLMAMLDLVALATVADVAPLVGVNRAFVRQGLVVMARRARVGL TALADVSGLDAAPTAYHLGFLLGPRVNAGGRIGKADLGARLLASDDPAEARDLADMLD QLNTDRRAVEQAVRDVAIAQALARGTDGPLVWAAGEGWHPGVVGIVAARLKEATNRPA VVIGLEDGIGKGSGRSVSGIDLGAAIQRLASEGLLLKGGGHKMAAGLSVAQDRLEPAM ARLAELLDKQGASALGPADLRLDGILMPGAATVDLVTLLDDAGPFGAGAPAPRFAFPD CQILFAKQVGETHLKISFGDGLGARIDAICFGAMDGPLGPALLQHNGTRFHLAGRIEV NVWQGRQSVQLRLEDAAPAH" gene complement(352070..353035) /locus_tag="SKA53_01866" CDS complement(352070..353035) /locus_tag="SKA53_01866" /note="COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphatase, class II" /db_xref="CDD:27899" /translation="MPSPADFNDRNLSLGLARVSEAAAIACASLIGRGDEKAADQAAV DAMRNQLNKLDIAGVVVIGEGERDEAPMLFIGEEVGTGNGPGVDIALDPLEGTTLTAK DMPNALAVIAMGPRGSMLHAPDVYMDKLAIGPGFRTGVVTLDMSPAERVSALAAAKGC STKDITVCVLERPRHEDMIAEIRATGAAIRLITDGDVAGVMHCAEPDITGIDMYMGSG GAPEGVLAAAALKCMGGQIFGRLLFRNDDERARATKAGITNFDRVYTRDDLVTGDVIF AATGVTDGSLVPGIKREVGFVTAETILMRSKTGSVRRMIYRNPVR" gene complement(353106..354392) /locus_tag="SKA53_01871" CDS complement(353106..354392) /locus_tag="SKA53_01871" /note="COG0460 Homoserine dehydrogenase" /codon_start=1 /transl_table=11 /product="homoserine dehydrogenase" /db_xref="CDD:10333" /translation="MTHPLRLGIAGLGTVGVGVVRIVQKHADLLQARSGRAISISAVS ARSRDKDRGVDLSGYAWEDDPVALARRDDVDLFIEVMGGHDGPAKEATEAAIAAGKDV VSANKALLAVHGQAIAEAAEAAGRVVRFEAAVAGGIPVVKALTEGLAANDIIRIMGVM NGSCNYILTRMENAGLTYSEVFDEANALGYLEADPELDVGGIDAGHKLALLSAIAFGT QVDFDAVQLEGIGAVSIEDIRQAADMGFKIKLLGVAQMTGRGLEQRMSPCLVPDTSPL GQLQGGTNMIVLEGDSVGQIVLRGPGAGEGPTASAVMGDVMDIARGLRISTFGQPATS LRRARPALAAVPAPYYLRLQLLDKPGALAKVARALGDAGISIDRMRQYGHAEPTAPVL IVTHKTTRTALDEALAAFKDTGVVSGDPVAIRIEAV" gene complement(354447..354677) /locus_tag="SKA53_01876" CDS complement(354447..354677) /locus_tag="SKA53_01876" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRYALPFLLILAACADIPALDGTLSDTARLAPYPRLAPLEDLPA PVMTEADGMENRLAALQRRAATLRAIDPDALQ" gene 354757..355344 /locus_tag="SKA53_01881" CDS 354757..355344 /locus_tag="SKA53_01881" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /db_xref="CDD:7613" /translation="MARKQGSHSDITGPRVQDTALRLIARHGYAAVSMRQIAAEVGVQ AGALYNYTPDKQTLLFDLMRAHMQEVLDALAAADLRGDPPARLDGFTRFHIRFHLPRP DQVFVSYMELRNLAPENFAILESMRRDYETALEDILRDGVAAGVFAVPDTRIATMAII AMLTGLSHWYREGGRLGMDAIEEIYCNLVQKSVRR" gene 355360..355845 /locus_tag="SKA53_01886" CDS 355360..355845 /locus_tag="SKA53_01886" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFNPDHTGGYPTVHASEGRRYFACAVIYGLGGLLIYTAMAHPPD LIWLIFMLGFGAAMLWLGEMMRRATRLGIVLTDADLRDTDGMVLVRIDDIALVDRGAL ALKPANGFTLVLHKRQPPGWSPGMWWRIGKRVGIGGVTAAGPAKFIAEQIALRIKARS G" gene complement(355846..356454) /locus_tag="SKA53_01891" CDS complement(355846..356454) /locus_tag="SKA53_01891" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMTDLIKRLRDNEDGSAAIELVLVTPIITWALLSTLVYFDAFRA ETRSARAGLTIADMFSREASAPVAIGAGYVDAAQALLRTLVEFDPAPTLRVTSYAWDA GANRYVLRWSESRGMGQALTDADLALMTDRLPLLADGATSLLVETSAAYRAPFSLGIA PFTNNTLDPVQMTTFTVISPRFVPAICFDPTPSIPTNGDEIC" gene complement(356451..357026) /locus_tag="SKA53_01896" CDS complement(356451..357026) /locus_tag="SKA53_01896" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTSALRLRDLLRRFSANEDGVVTVEFVIIFPVFMTFFLMTYESG MISLRHFALERAVDVVVRDVRIGAIPNPTRASLRTNICNVARLLPDCENQLQLEMIRR DLRNWVDVPDTVQCIDRGAEVQPVTSFTSGGNNELIFLRVCVRLDPVLPTSLLGRTIV DANADSAAGGSYALVSTTAFVVEPFRNTPGS" gene complement(357023..358480) /locus_tag="SKA53_01901" CDS complement(357023..358480) /locus_tag="SKA53_01901" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14093" /translation="MQNSKLPLTSKAHNPRWRIRYLHAFGRDEDGSVIIMTILLLVTM LIMGGMAVDFMRYEARRATLQSVSDRAVLAAASLNQTLDSRDVVEDYFAKAGFPNALV GAPIVVDNGNSRTVTVRSALDVNTFYLRLAGMDRLTAPARSSATEGVGKVEISLVLDI SGSMRFSNRFVNMQAAAIAFAEEVLDPANGGTVSLTIIPYAGATNPGPEMFAFMGGVR YPDTLLAGDDGILGTEDDYFFPQVSSCVEMVGSDWSSAGLPGAGRAQVPHFQVWDIAR SVMDWGWCPQDRSSIQYAMATPAQARSFINGLRMHDGTGTHYAMKYALATLDPSSQPA FMHLSHPGRGLVPPQFANRPAAWDDPETKKIIVLMTDGDITQQERPRIAQQERDIDYI ISRSINGRDNRGQFVDAATNVGRFEAICTLANQPARSVDVYTVAFEVQPNSAADLQMR NCASDPSMFFRTSGAELIDVFSGIAERITDLRLNL" gene 358787..360274 /locus_tag="SKA53_01906" CDS 358787..360274 /locus_tag="SKA53_01906" /note="COG0334 Glutamate dehydrogenase/leucine dehydrogenase" /codon_start=1 /transl_table=11 /product="glutamate dehydrogenase" /db_xref="CDD:10208" /translation="MRPNRPGAAPGKEGMTMNAHDPAQEPSFRESVDLMFNRAVALMD LSPGLEEKIRVCNATYTVRFGVRLRGALHTFTGYRSVHSEHMEPVKGGIRYAINVHQD EVEALAALMTYKCALVEAPFGGSKGGLRINPADWNEHELELITRRFAYELIKRDLINP AQNVPAPDMGTGEREMAWIADQYRRMNTTDINAAACVTGKPTNAGGIAGRVEATGRGV QYALREFFRYPEDVAKANLSGSLDGKRVIVQGLGNVGYHAAKFLSEEDGALITTIIER DGALHDEAGLHVETVRAWITKNGGLANYPHAKHIPDGASMLEADCDILIPAALEAVIN LSNADRIKAPLIIEAANGPVTAGADEILRDKGCVIIPDMYANAGGVTVSYFEWVKNLS HIRFGRMQRRQEESRHQLVVDELERLSADKGLGWSLSPDFKDKYLRGADELELVRSGL DDTMRSAYQAMRAVWHGRADVHDLRTAAYLVSIRKVADSYRAKGL" gene 360379..361632 /locus_tag="SKA53_01911" CDS 360379..361632 /locus_tag="SKA53_01911" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, beta subunit family" /db_xref="CDD:10534" /translation="MGYSGFQIIKEGLFGQKGWKPLWRDPAPKARYDAIIIGGGGHGL ATAYYLAREHGLTNIAVLEKGHIGGGNIGRNTTIVRANYFLPGNQEFYSHSLKLWEGM EQDLNYNVMHSQRGLINLFHSDGQRDAFVRRGNAMINQGDDAILLDREGVRSHLPYLD FDNGRFPIYGGLYHPRGGTARHDAVAWGYARGADQRGVDLIQNCEVTGIDIENGVVTG VQTTRGAIRARKVGIVTAGRSGQVAAMAGMRLPIESHVLQAFVTEGLKPVIDHVVSFG MGHFYISQSDKGGLVFGGDLDFYASYAARGNLPMAEHVMEAAMTLMPMIGKARVLRSW GGIMDMTPDGSPIIDTTPTKGLFIDCGWCYGGFKAVPASGFAFAHLMATGQPHATAAK FRLDRFRTGVGLMDEEGTGSQHNLH" gene 361678..361941 /locus_tag="SKA53_01916" CDS 361678..361941 /locus_tag="SKA53_01916" /note="COG4311 Sarcosine oxidase delta subunit" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, delta subunit family" /db_xref="CDD:9826" /translation="MRINCPHCGERDRREFYYMGDAVAVTRPAPDAGPDAWDDYLHNR DNPAGDTRDLWYHEAGCGAWIVVARNTLTHAVHGATLAQKAAS" gene 361938..364835 /locus_tag="SKA53_01921" CDS 361938..364835 /locus_tag="SKA53_01921" /note="COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, alpha subunit family" /db_xref="CDD:10278" /translation="MRLRNPGQTVTFSFDGKPVQGVPGEPVAAALLASGIRLMGRSFK YHRPRGVLTAGSEEPNALVTVGRGAAQDPNQRATMVEVSEGLEVFSQNAWPSLRHDAL AVNDLLSPFLGAGFYYKTFMWPASFWERLYEPVIRRAAGLGRLSGKANADLYEKAFAF CDLLVIGAGPAGLMAALTAGRAGVDVILADEDSAMGGRLLREVEDVDGRPAALWVADV LAQLRALPNVRLMPRTTVTGAYDQGTYGALERIVGADAPGECFWRIVAKRSVLCAGAL ERSIAFPDNDRPGIMLAGAVRAYVTRWGVAPGRSVTVFGNNDDAHRTARDLAAAGIKI AGLIDARADLAVSADYPVFTGGSVTATAGRLGLTSITVTHQGGTRVIQTDCLAVSGGW NPSVHLTCHMNGRPQWREDIAAFVPTPDAIPGMAVAGACHGVFDTQGCLRDGAEVAAA IARDLGFAPEVTLPVAEARAYAIAPFWETPGKGRKWVDLQNDVTTKDIAISAQENMRS VEHMKRYTTQGMAPDQGKSSNVLALAVLADLTGRGIPETGTTTFRPPFVPVSIAAMGA GGQGKGFAPTRLMTSHHASVAARAPMIEAGLWYRPSYFPLEGDVSWRQSCDREVNYVR NVVGVCDVSTLGKIDVQGPDAAPLLDFVYTNRMSTLKVGRVRYGLMLREDGFVMDDGT AARLGPDHFVITTTTAAAGQVMRHLEFARQVLRPDLDARIVSVTDHWAQFAVAGPRAQ VLLNTVLDEQITDEDWPFMACGAVGIGGVAGRLFRISFSGETAYEIAVPARYGESLFR QLVAQARTLGGGPYGLEALNVLRIEKGLLTHAELHGRTTAYDLGLAGMVSVQKDCIGQ AAARRPGLVDPMRERLVGLRAVEEGRRLTAGAHLFAKDAKAVTANDQGYVTSACYSPT LDCYLGLAFVKNGPERYGEVIRMVDHLRGVDTLAEVCHPVFFDPEGGRARG" gene 364837..365370 /locus_tag="SKA53_01926" CDS 364837..365370 /locus_tag="SKA53_01926" /note="COG4583 Sarcosine oxidase gamma subunit" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, gamma subunit family" /db_xref="CDD:9827" /translation="MIALGAFGDLLPLQTGDVTCTEVMRETLFCVAPYRGQHKAVSAA LKAQLGLSLPAAGRRKIAGDAICQWIGHDAWVVSAPVMLDGLAAVSDQSDGYAALDVA GAGVEAVLARLIPLDLRSTTFKVNHTARSLLGHVPVSITRTGAQAFEVMVMRSMAASL VHDLQVAMSGLARRGSA" gene 365486..367450 /locus_tag="SKA53_01931" CDS 365486..367450 /locus_tag="SKA53_01931" /note="COG0358 DNA primase (bacterial type)" /codon_start=1 /transl_table=11 /product="DNA primase" /db_xref="CDD:10232" /translation="MSLPPGFLDELRNRLSLGQVVGRKVMWDARKSNPGKGDLWAPCP FHQEKSASFHVDDRKGYYYCFGCHAKGDAISFVRETENVDFMEAVKILAGEAGMPMPE RDPAAQQKADLRGQLVEVMEKVIKWHRLQLQTAAATEARDYLARRGLSPEAQARWDIG FAPAQGGALAHLSAQGVDAKLVIAAGIAAESDRGGAPYDRFRGRIIFPIRDARGRAIG MGGRAMDPNAPAKYYNSPETPLFDKGRSLFNHGPAREAAGKGKPLIVAEGYMDVIALA EAGFTATVAPLGTAITEDQLRLLWRIAPEPIIALDGDTAGLRAAMRLIDIALPLLESG QSLRFALMPPGLDPDDVIKTQGAGAMQKLLDAAIPMVQLLWQRETEGKNFDSPERKAA LDKALRDKIKLIADPSIRSHYGEAIKEMRWALFSTRRPAAPRAQGGTWSRNADPWKRA ISPVATARNSMLGAGAVSQEHLREAVILATMIVAPSVAVEFGDALERIDCRDPAHRDL QAAILRHLGNADLETIISADLGADALEKLLTQSHVAISPAVRRKGEAEVARLCLAEEF AKLTARRGHAREIEDAVEDLGGLADEGLTWRLAQASAAVDKAGRGDNEDRAEYAVGPN GARMKKDERSALDQLLDQINFAKGQDRPRS" gene 367580..369559 /locus_tag="SKA53_01936" CDS 367580..369559 /locus_tag="SKA53_01936" /note="COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /db_xref="CDD:10439" /translation="MAAKDTDDRKDNDQDGDISLDMSQAAVKRMIADARERGYITYDQ LNAVLPPEQVSSDQIEDVMSMLSEMGIQVTEEEESEESDDGAGGTDIATVSGSRDVTI GGAEAEKLDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRNTMILGLCESPLTF QAITIWRDELLSEDILLRDVIDLETTFGNQLGEEGEVETVVTAASVSDTKEDGGSELD ADGNPISKDDDDDDDDQANMSLAAMEAALKPRVLETLEIIARGFADLSDMQDARMSAT LNEDSSFSVKEEERYQTLRSEIVVLVNSLHLHNNRIEALIDQLYGINRRIMSIDSAMV KLADQARINRREFIDEYRGRELDPNWLEQMAEKSGRGWQALVEKSTDKIEELRNDMAQ VGQYVGVDITEFRRIVQQVQKGEKEARQAKKEMVEANLRLVISIAKKYTNRGLQFLDL IQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINK LVRTGRQMLHEIGREPTPEELAEKLQMPLEKVRKVMKIAKEPISLETPIGDEEDSQLG DFIEDKNAILPLDSAIQENLKETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQ QFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ" gene 369878..370348 /locus_tag="SKA53_01941" CDS 369878..370348 /locus_tag="SKA53_01941" /note="COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15551" /translation="MRCPFCGNVDTQVKDSRPAEDHVAIRRRRFCPACGGRFTTYERV QLRDLVVIKSNGRREDFDRQKLERSIRIALQKRPVEPERMDQMISGIVRRLESLGDTD IPSGTIGEIVMESLARIDTVAYVRFASVYKNFQAADDFDKFVSELRPHAAKEDE" gene 370345..371424 /locus_tag="SKA53_01946" CDS 370345..371424 /locus_tag="SKA53_01946" /note="COG0117 Pyrimidine deaminase" /codon_start=1 /transl_table=11 /product="riboflavin biosynthesis protein RibD" /db_xref="CDD:9992" /translation="MTDARYMALALQLGRRGMGRVWPNPAVGCVIVNHGRIVGRGWTQ DGGRPHAETVALAQAGPDACGATVYVTLEPCAHHGQTPPCAAALIAAGVARVVVALGD PDARVAGRGIALLEQAGIAVETGLLADQARADHAGFLSRITAARPFVTLKLAGTLDGR IATASGESQWITGTEARRAVHMMRARHDAVLVGAGTVRADDPALSVRGLGIPRQPVRI VVSRAVKLPLTSQLAQTARQSPVWICHGAEADVADWLALGAVSLPCAVRAGQVEPEAM MQALASAGITRVFCEGGGMLAASLLGAGLVDDLVVMTAGCAIGAEGTPALAAMGIGRL ADAPRFALHDLARLGDDVMTHWRRV" gene complement(371476..373470) /locus_tag="SKA53_01951" CDS complement(371476..373470) /locus_tag="SKA53_01951" /note="COG3563 Capsule polysaccharide export protein" /codon_start=1 /transl_table=11 /product="capsular polysaccharide export protein KpsC" /db_xref="CDD:12890" /translation="MPDEPRQNLYVYSGGFLTQPRIRRILTLAGFDIRLGAPGPQDNV GVWGQSPTAPRGEAVARHKGAGLIRVEDSFLRSVRPGRSGDLPIGLNIDRRGVHFDPA TPSDLEMILAHDPLDDTVLLNRAKAGISALQAEHLSKYSCFDPATPVPDAGYVLVIDQ TRMDASITASGADSNTFREMLFFAQTEHPSQRIVIKTHPETMTGDKAGYFTAADTSDR ISLCAAPVSPWALLAGAVAVYTVTSQLGFEAILAGHKPVVFGQPFYAGWGLSDDRKPL PRRQRRLTRAQLFAGAMILYPTWYDPYHDRLCSFEEATATQSALTRAWRDDHQGWVAA DMRLWKRSPLQQFFGQYAQVRFARGAKAAPQAEQTNRRLMRWASTDARDAVLVEDGFV RSRGLGADLVAPLSLVLDDLGIYYDATRPSRLEALIAGSTTLPATARDRAAALIKRIR AAGLSKYNLQGTPLPDLPKGRRILVPGQVEDDASIRLGAGAVRSNAALLQAVRAANPA AVIIYKPHPDVRANLRPGHISNARDWADLVLEDADPIAAIQACDCVWTMTSLLGFEAL LHDRPVSCLGMPFYAGWGLTDDRTMPLSRRNKTLDLTALVHAALIAYPRYRDPVSGLP CPVEVIVDRLTHGDIPPATRLNRATAKLQGLFASAAPLWR" gene complement(373480..373656) /locus_tag="SKA53_01956" CDS complement(373480..373656) /locus_tag="SKA53_01956" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQTSQVPGGFYSAKGRRNLIRHVVPMMLAEAGPYAAPCGNDQAH DLQTAALAKIQRVA" gene complement(373729..374778) /locus_tag="SKA53_01961" CDS complement(373729..374778) /locus_tag="SKA53_01961" /note="COG3562 Capsule polysaccharide export protein" /codon_start=1 /transl_table=11 /product="capsular polysaccharide export protein KpsS" /db_xref="CDD:26354" /translation="MSSQRRFLFLQGPHGPFFRQIAAALRTSGADVWRVGFNAGDAAF WWRSPGYLPFRDNPDAWPSALADTLRDKQITDIVLYGDTRPIHAEAVRQARATGLRIH VFEEGYLRPYWVTYERGGSNGHSQLRSLSIADMRAHLAQPGQDQPTPPSHWGDMRQHI FYGALYHWFVMFRNASYPQFRPHRALPVRTEAQLYTGRLLMMPIMALLRGLATLRIKA GGYPYHMALLQLEHDSSFQIHSPFRDMESFIDVVIAGFAKGAPAGHHLVFKTHPLENG RKPLRRLIRQAATAQGIAHRVHFVRGGKLARLLDSALSAVTVNSTAGQQVLWRGIPLR IFGAAVYDKPQFVSD" gene 374907..375503 /locus_tag="SKA53_01966" CDS 374907..375503 /locus_tag="SKA53_01966" /EC_number="2.5.1.9" /note="COG0307 Riboflavin synthase alpha chain" /codon_start=1 /transl_table=11 /product="riboflavin synthase subunit alpha" /db_xref="CDD:10181" /translation="MFTGIVTDIGRVLALDQQGDLRARIGTGYDVAGIDIGASIACNG VCLTVIALGRDPQNWFDVQISAETVGATNVSGWTVGKRLNLERALKVGDELGGHIVSG HVDGVAEVVAMRDEGDSTRVTFRAPEALARFIAPKGSVALDGTSLTVNEVAGRDFGIN FIPHTKTATTWGDVAVGDLINIEIDTMARYVARLQDYA" gene 375590..376762 /locus_tag="SKA53_01971" CDS 375590..376762 /locus_tag="SKA53_01971" /note="COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase" /codon_start=1 /transl_table=11 /product="Bifunctional GTP cyclohydrolaseII/3,4-dihydroxy-2butanone-4-phosphate synthase" /db_xref="CDD:4383" /translation="MLGYLAGNQAAGSHMSITFETPGPVEQDWSDAISKIEDIIDDAR NGRMFILVDHEDRENEGDLVIPAQMATPDAINFMAKHGRGLICLSLPGSRIDALGLPL MASNNSSRHETAFTVSIEAREGVSTGISAADRARTVSVAIDAAKGAADIATPGHVFPL RARDGGVLVRAGHTEAAVDISRLAGLNPSGVICEIMKEDGEMARLPDLVAFAQLHGLK IGTISDLIAYRRRHDNLVVLRDSQTITSEFGGDWEMRIFVDETQGAEHIALIKGDITT PDPVLVRMHALDPMLDVVGVGPKGRRNEFGDAMQLIADEGRGALVLLRDLQMKLDPSE EATPQTLRQYGLGAQILSALGLHDITLLTNSPKPRVVGLDAYGLEIVGTRKISEIG" gene 376762..377289 /locus_tag="SKA53_01976" CDS 376762..377289 /locus_tag="SKA53_01976" /note="COG0054 Riboflavin synthase beta-chain" /codon_start=1 /transl_table=11 /product="riboflavin synthase, beta subunit" /db_xref="CDD:7812" /translation="MAGPSHHILPLPEFDKPVKILIAASPYYKDISDHQIAGALAEIA KAGASHEIVHVPGALEIPTAIGIAARMSDFDGYVALGCVIRGETTHYDTVCNDSSRAL QLLGLQGLCIGNGILTVENYAQAVVRADAAQMNKGGGAAAAALHLVALARKWGKAEKG VGFTRDILMTGHTTA" gene 377286..377753 /locus_tag="SKA53_01981" CDS 377286..377753 /locus_tag="SKA53_01981" /note="COG0781 Transcription termination factor" /codon_start=1 /transl_table=11 /product="putative N utilization substance protein B" /db_xref="CDD:10649" /translation="MTISNNQRRKMKSAARFYAVQALFQMEATGQTVEGIVREFEDHR FGEIIDDVELVEGDVDTFRRMMDRAVDLQASIDQMTDRALVEKWPIARIDPTWRALFR AAGAELLDKDTPPKVVISEFVAVAEAFSHDGKEPKFVNAVLDHMARQAQPEAF" gene complement(377868..378302) /locus_tag="SKA53_01986" CDS complement(377868..378302) /locus_tag="SKA53_01986" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSIMQRRTGYLSRYTKATGAACAALIIAAAPVQADPTIGFGLSI SYGQQKVDTGVGVRVFSDNERDSNVASVGLDYMLISQSWRATIGAAHLDDDTYVGLDL GFDGDFDFGVSAGWLKEQTEQVFAQATGLQPIIPDQSLGQRR" gene 378541..378867 /locus_tag="SKA53_01991" CDS 378541..378867 /locus_tag="SKA53_01991" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGDDDMTHDDEPDLMRLYLRHCAVGFVVAAGFVALLLWHDVARL GTLVANSDIGWLAVFLLWFFHGTVFGSVQFAISIMLDAQDDDDDDQSGGQLIPIRVTA GSRRGR" gene complement(379080..379226) /locus_tag="SKA53_01996" CDS complement(379080..379226) /locus_tag="SKA53_01996" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSLIASVTFFEICMALLTIGLAERLLLGYAPASLVGRDGWLLRG DIEE" gene 379380..379838 /locus_tag="SKA53_02001" CDS 379380..379838 /locus_tag="SKA53_02001" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25191" /translation="MSSGFVSPALQPGQRLARGVCRHLRGHDFVSVEELVPIPGLRVD VMALGPKGEIWVIECKSSRADFQTDRKWQGYLDWCDRFFWAVDAAFPLDLLPDDTGLI IADSYDAEILRMGPDRPLPPARRKMLTQKFARHAAIRAQMARDPGFVSAF" gene complement(379825..380016) /locus_tag="SKA53_02006" CDS complement(379825..380016) /locus_tag="SKA53_02006" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGINSERDIEANMQIGPTELGMVRIFIEAGDTEIPMDFEPEEAE EIADEIRAAAQAARAVKKR" gene 380141..380214 /locus_tag="SKA53_t03223" tRNA 380141..380214 /locus_tag="SKA53_t03223" /product="tRNA-His" gene 380237..381286 /locus_tag="SKA53_02011" CDS 380237..381286 /locus_tag="SKA53_02011" /note="COG0564 Pseudouridylate synthases, 23S RNA-specific" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthase D" /db_xref="CDD:10435" /translation="MMTENLMGPTLITFTIAQNPPPRLDKALGRDVPNDAALSRSRLA RLIADGAVAVDGQVVTDPRFRIAEGAQVAVTVAVAVESHIEAQDITLDVVFEDDDLIV INKPAGMVVHPAPGTADGTLVNALIHHCGDSLSGVGGLKRPGIVHRIDKDTSGLLVVA KSDRAHHHLADQFADHTVERRYIAVCYGVPEANDPRLRGIKGTSFEPGNILKIQTQLG RHRTDRQRQAVSFTAGRHAVTRVRILAALGAMPVAALVECWLETGRTHQIRVHLAHCG HALIGDPTYGSRRKMSPKALGEAGVAAVAAFPRQALHAATLGFVHPVTEEFLEFSAPL PADMQALLAAMGAPV" gene 381432..382343 /locus_tag="SKA53_02016" CDS 381432..382343 /locus_tag="SKA53_02016" /note="COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /db_xref="CDD:10439" /translation="MEGTTVSDYKNLPAPTPEGGLNRYMQEIRKFPMLEPEEEYMLAK RWVDHEDTEAAHKMVTSHLRLAAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEK GFRLATYAMWWIRASIQEYILRSWSLVKMGTTSAQKKLFFNLRKAKNRIGALEEGDLR PENVKQIANDLGVTEDEVISMNRRLSGGDASLNAQIGSDGEGSMQWQDWLEDDSANTA ADYEEHDELDARRALLVEAMTLLNPREKDILVQRRLAEETVTLEDLSARYEVSRERIR QIEVRAFEKLQSRMTQLAREKGMLESA" gene 382469..383449 /locus_tag="SKA53_02021" CDS 382469..383449 /locus_tag="SKA53_02021" /note="COG0673 Predicted dehydrogenases and related proteins" /codon_start=1 /transl_table=11 /product="oxidoreductase, Gfo/Idh/MocA family" /db_xref="CDD:10542" /translation="MTMTPIRWGILGAADFARRFMGPAIHAAKGAELYALATSSPAKA AHFADFAPHVIVHDSYDALLADPAVDAVYIPLPNHLHVDWSLKALAAGKHVLCEKPMG LAAADYDRLIAARDAAGLLAAEAFMIVHHPQFARARALYAQGAIGKLMHVDATFTYNN ADDVTNIRNRPETAGGALRDIGVYTFGAARFVTGQEPDAITYADLRLENDVDVFAQIA ARFPDFTYSAIVSMRMHPRQQITFHGDKGILRLTCPFNANVFDMAQLTLETDGTSTIS ERWPGVNHYIVQVENFGHTLRGTARYPCALEFSRGTQAMMDMVFTAGARR" gene complement(383507..385312) /locus_tag="SKA53_02026" CDS complement(383507..385312) /locus_tag="SKA53_02026" /note="COG1164 Oligoendopeptidase F" /codon_start=1 /transl_table=11 /product="Oligoendopeptidase F" /db_xref="CDD:10883" /translation="MQNPVYDANTSGKNSFGDLPEWDLTDLYPSPDSPEITRDMAWLE TECAAFAADYEGKLASLDAAGLLGAVQRYEQIDVIAGRIMSFAGLRYYQITTDSDRAK FMADCQDRITRFTTPLVFYGLEFNRLDDTHLAGLLAANADLARYKPVFDRMRAMKPHQ LSDELEKFLHDQSTVGAAAWNRLFDETMAGLEFVVDGDVLSLEGTLNLLTDPDRAKRE AATHALTAVFRENIKIFARVHNTLAKEKEIHDRWRKMPSPQAARHLANHVEPEVVEAL RNAVVAAYPRLSHRYYALKAKWLGLDRMQVWDRNAPLPMDQTRVIGWEEARDTVLTAY AGFDPRMAEIAGRFFDKGWIDAATKPGKAPGAFAHPTVTPVHPYVMLNYLGKPRDVMT LAHELGHGVHQVLAAEQGELLSSTPLTLAETASVFGEMLTFRQLRDTAKTPQDRKVLL AGKVEDMINTVVRQIAFYDFECKLHAARAEGELTPEDINALWMSVQAESLGPVFDFAD GYETFWAYIPHFVHSPFYVYAYAFGDGLVNALYAVFEEGDADFRDKYFAMLRAGGSKH HKDLLAPFGLDASDPAFWDKGLALIESMIDELEAL" gene complement(385376..386965) /locus_tag="SKA53_02031" CDS complement(385376..386965) /locus_tag="SKA53_02031" /EC_number="6.5.1.1" /note="COG1793 ATP-dependent DNA ligase" /codon_start=1 /transl_table=11 /product="DNA ligase" /db_xref="CDD:11503" /translation="MKAFATLFSALDESTKTSAKVAALADYFRTAPDSDKLWTIALFT GRRPKRVITASKLRLWAAEVAGLPDWLFEESYSIVGDLAETIALVLPAPRATSDASLT DWIMHLRALGMQDDDARKAGIIAAWDRLPPAERFLFTKLLTGGLRIGVSAKLMTRALA QATGQPEPELTHKLMGNWTPDSVTWASLIEADDPGTDASRPYPFYLAYGLEDLATLGP PADWSAERKWDGIRGQFILRGGTHYLWSRGEDLMTDRFPELAQLCDALPDGTVIDGEV LAFADDAPLPFAALQKRIGRKTVPRKLLTEAPVILMAYDLLEHDGRDIRALPFADRRA ALARLVARVSTNAPLRLSPQVTFGTWDDLAAARSQSRDVGAEGLMLKRHDSPYLAGRK KGDWWKWKVDPLTIDAVMIYAQSGSGRRANLFTDYTFAVRDGDAMVPFTKAYSGLTDA EFRQITAWVRKNTLQKFGPVRQVPAVHVFEIAFEGINASPRHKSGVALRFPRMLRWRQ DKPVAEANTLDDLREMLRLYG" gene complement(386962..387972) /locus_tag="SKA53_02036" CDS complement(386962..387972) /locus_tag="SKA53_02036" /note="COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10954" /translation="MADVLTFTESGIYCPAGDFYIDPWRRVPRALITHAHSDHARWGM DSYLATPTTAAVMRHRLGDIAVQTIAYDSALRIGDAVVSLHPAGHVPGSAQIRVAVKG QVWVVSGDYKIVDDGLSEPFAPVPCHAFITECTFGLPIFNWTPQDVLRDQINRWWAES AAAGKTAILGAYALGKAQRLLRLLDPAIGPILTHGAVENTNDVLRGIAIPLPATTRVD TTMTAKSHPGALVLATPAALGTPWARRFGPSSTAFASGWMALRGVRRRRAADRGFIVS DHADWAGLNTAITATGAEKIFVTHGYTTAFQQWLREQGHDAHTVSTDYQGEGFDSGED AA" gene complement(388087..389025) /locus_tag="SKA53_02041" CDS complement(388087..389025) /locus_tag="SKA53_02041" /note="COG2267 Lysophospholipase" /codon_start=1 /transl_table=11 /product="hydrolase, alpha/beta fold family" /db_xref="CDD:11973" /translation="MAPAAPFFDDVANGPAGGAAHWLTTRDNRRIRAGHWPGDGAKGT VLIFPGRTEYIEKYGITAQALTAAGYSVLAVDWRGQGLADRLISDPNLGHIGDFADYQ HDVAALLDHAMVLGLPRPFFLIAHSMGGCIGLRSLMNGLDVKAVMFSAPMWGIQMPPA TRAFAWSLTTLSLSFKFDEKLVPGQSATSYPLIQPFAGNMLTDDPEIYAALRGQIAVH PALGLGGPSLRWLNRSLHEMRDLARLPAPATPCITFLGSKESIVDPAAIRTRMTRWRD GVLHDIKGGLHEMLMDKPAMRDSVNATTIAHFDAHR" gene complement(389025..389315) /locus_tag="SKA53_02046" CDS complement(389025..389315) /locus_tag="SKA53_02046" /note="COG3255 Putative sterol carrier protein" /codon_start=1 /transl_table=11 /product="sterol carrier family protein" /db_xref="CDD:4671" /translation="MSDVITEAVSQLNAKMGGNGFDGCAKFVIEDEGAIIIDQTGARA ADDDADVTLTASADVFKAILDDELNPTTAFMTGKLSVDGDMGVAMKLTSVLG" gene 389436..389951 /locus_tag="SKA53_02051" CDS 389436..389951 /locus_tag="SKA53_02051" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:5390" /translation="MLVLGFSLPAVAQTDRLDQLFAELSQTDEDGSLRIEQQIIAEWS KSGSASIDLLLQRGQDALDDGAAEAALDHFSALVDHAPDFAEGYFLRATSFYLLDEIG PAMADLGEALTRNPRHFEAMRGLAVMMEETGRPQAALELYDMILQIVPYSMQAREDRA RLHQQLDGQAI" gene 389977..392751 /locus_tag="SKA53_02056" CDS 389977..392751 /locus_tag="SKA53_02056" /note="COG0513 Superfamily II DNA and RNA helicases" /codon_start=1 /transl_table=11 /product="helicase, putative" /db_xref="CDD:13744" /translation="MQGSRITAVLGPTNTGKTHYAIQRMLSYRTGVIGLPLRLLAREV YDRIVAIKGPGVVALVTGEERIVPPRAAYWVCTVEAMPDGMGCDFLAVDEIQLCADPE RGHIFTDRLLHARGLHETLFLGAETMRGAIAALVPGAQFMVRDRMSELTYTGSKKISR MPARSAIVGFSVDNVYAIAELLRRTKGGAAVVMGALSPRTRNAQVEMYQNGDVDYLVA TDAIGMGLNLDISHVAFSSLTKYDGRRMRHLEPQELAQIAGRAGRHIENGTFGVTGEA PPLDDAVAEAICNHQFRPVAKLQWRNSRLQFGSVKRLIGSLEDRTDDPWLTRVRESDD LAALKTLAQDAEVAARATDGPSVKLLWDVCRIPDFRGISAGEHAGLLTQIYNDLHQLG HVSANWFALQVRRIDRTDGDIDTLSKRLAYIRTWTYVAQRKGWLVDDSHWRDETRAVE DRLSDALHGALTQRFVDRRTSILLRRLKQKESLLAEVNEKGEVTVEGEFVGRLEGFRF RMDKAGSPDEAKTLRQASQQAIAPHLHLRADRFYNAPDTEIDFTEQGGLMWGDQAVGK LVAGSDPLKPGVAVFVDDEAGPDVIAKVQRRLQHFIDRKIAAGFEPLLALKNDETLTG AAKGFAYRMAEHFGIIPRGDIADEVKALEQDARSALRKHGVRFGQFTIFQPLLLKPAP TRLRLVLWSLARDLQEFPQSPPPGLVTVPAAKDAVPGYYAMAGYRAAGERAIRIDMLE RLADLLRDKDSRAGFEVNPDMLSITGMTLDQFADLMAGLGYKAEKAERAKVKPARADV TGDPSVAKPADTPDHADNAAMPTADVPDATPQEMPQEMPAGASVETPDAPEMEVFYTF TWGGRAVRPARPTGGDRPRGNPKSKGKPKGKPTAQASKPDSYQAKPRYEKPIDPDNPF AAALAGFKKA" gene 392748..393137 /locus_tag="SKA53_02061" CDS 392748..393137 /locus_tag="SKA53_02061" /note="COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)" /codon_start=1 /transl_table=11 /product="S4 domain protein" /db_xref="CDD:10906" /translation="MTDAPRPTIRLDKWLWHARFFKSRSIAAGVVTGGKVRVGGNPVS KPARAVGPGDVLTFVQADVARVIRILACGTRRGPAPEAQALYEDLTPVTVPVPQTPGS DRKGRPTKKDRRDMMTQRGMDDPFTLE" gene 393185..393520 /locus_tag="SKA53_02066" CDS 393185..393520 /locus_tag="SKA53_02066" /note="COG1146 Ferredoxin" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster-binding protein" /db_xref="CDD:10866" /translation="MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCG VCEPECPADAIRPDTEPDMEKWVEFNRKYSEMWPVIITKKDPLPGAEEMDGKPGKLDL FSEAPGEGG" gene 393540..394217 /locus_tag="SKA53_02071" CDS 393540..394217 /locus_tag="SKA53_02071" /note="COG1329 Transcriptional regulators, similar to M. xanthus CarD" /codon_start=1 /transl_table=11 /product="putative CarD-like transcriptional regulator" /db_xref="CDD:17166" /translation="MRFVSYAGTLPKGAFLWYDSPNDANDVIPPIGMNPPVTLVTDGF LSPDVPDCHERTIMTKKKSEFSPDQFVVYPAHGVGKIVSVETQEVAGFELEMFVIAFE KDKMTLRVPTHKATDVGMRALATPDVVNHALKTLRGKAKVKKAMWSRRAQEYEQKINS GDLIAIAEVVRDLHRQDDQREQSYSERQLYEAALERLTREFAAVAGDDENAAAAQIGS VLVGRAA" gene complement(394270..395532) /locus_tag="SKA53_02076" CDS complement(394270..395532) /locus_tag="SKA53_02076" /note="COG0151 Phosphoribosylamine-glycine ligase" /codon_start=1 /transl_table=11 /product="phosphoribosylamine--glycine ligase" /db_xref="CDD:10026" /translation="MNILILGSGGREHSLAWAIKQNPKCDRLIVAPGNAGIAQIADCA DLNILDGDAVANFVEENTIDFVIIGPEGPLAAGVADRLRRTGTLVFGPSQAAAQLEAS KSFTKAICDAAGAPTAGYARFTEAAPARAYVQAQGAPIVIKADGLAAGKGVTVAMTVD EALDALDHMFDGSFGPAGTAVVIEEFMEGEEASFFVLCDGTTILPVGTAQDHKRAFDG DQGPNTGGMGAYSPAPVMTDEVTQKALREIIQPTMDEMARRGTPFQGVLFCGLMIENG QPRLVEYNVRFGDPECQVLMMRLGGQVLDLLQACAEQRLHEISVNWADDHALTIVMAA NGYPGDYAKGSVIGGLDSQPADSFHMVFHAGTKRFEGQYQAHGGRVLNITARGASLAE AHEQAYAMAQGVDWPGGFYRSDIGWRAL" gene 395659..397158 /locus_tag="SKA53_02081" CDS 395659..397158 /locus_tag="SKA53_02081" /note="COG1570 Exonuclease VII, large subunit" /codon_start=1 /transl_table=11 /product="Exonuclease VII, large subunit" /db_xref="CDD:11283" /translation="MMDLFEDGPTDKSADNTPEFSVSEISGAVKKTIEGGFAHIRVRG ELGRISRPSSGHIYLDLKDDRSVLSGIIWKGRATALTHRPEEGMEVIATGKLTTFPGQ SKYQMIIEDIQPAGAGALMAMLEKRRVMLAGEGLFDAARKKPLPYLPEIIGVVTSPSG AVIRDILHRLRDRFPRKVLVWPVAVQGQKCAAEVAAAIDGFNRLTPGGALPRPDLIIV ARGGGSLEDLWGFNEEIVVRAAAASDIPLISAVGHETDTTLIDFAADIRAPTPTAAAE LAVPVRIELLAFVDQQGARLVRALSNGVQTRRQRLRDLARALPRVDTLADGPRQRLDY LADRLPAALRQAAAQKRLQLSDAALRPAILQRRLAEDRRRLSALSDRLAPALQRRSRD AAVTLERAGRGLRCDLLQTRLDRQAERLSSVLARLSDRATRQQTERTARLAALDRLRE TLGYMETLKRGYAVVRAGDVLVTDTVAAAKADHLEIQFADGRIAVASRR" gene complement(397147..397614) /locus_tag="SKA53_02086" CDS complement(397147..397614) /locus_tag="SKA53_02086" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIDPTPPAQRQDCLHGCRSRIYRWAAGALRNVGLLLLLTTQANA QNKMTGEAFDAHVTGRTITFRTDTNPAYGIEAYLPGRRVMWSAFDGTCMYGTWYESKG NICFIYDDDPEPKCWATYLQKGTMWATFINVPDGTVIYETDADEPLICNNLSS" gene 397752..399437 /locus_tag="SKA53_02091" CDS 397752..399437 /locus_tag="SKA53_02091" /note="COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit" /codon_start=1 /transl_table=11 /product="formate dehydrogenase, beta subunit" /db_xref="CDD:11603" /translation="MAKDNQDGIWKSGKGKGRHTTKGRQLDDGAMAEILALLGDRPRR RDLLIEFLHLVQDANGHLSAAHLRALAEEMRLSQAEVYEVATFYAHFDVVKESETPPP ALTIRVCDSLSCELAGAQALKAALEDGLDPAQVRVLRAPCMGRCDTAPVLEIGHNHID HATPAKVQAAIVADDTHAHLPDYQTLASYCADGGYAVLEHLRAQGDWQAVQDKVLASG LRGLGGAGFPSGRKWGFVRAHAGPRYLAVNGDEGEPGTFKDRYYLERTPHVFLEGMLI AAWAVEAQTCFIYMRDEYPAVLAILRREIAALEQAGIVAPGFIDLRRGAGAYICGEES AMIESIEGKRGIPRHRPPFVAEVGLFGRPTLVHNVETLLWVARVCREGPDILSSVEKN GRKGLRSYSVSGRVAQPGMYVLPAGSTITDIIAAAGGMAAGHVFKAYQPGGPSSGLLP ATMADVPLDFDTLQPHDTFIGSAAVVVLSQQDRARDAALNMLRFFEDESCGQCTPCRV GCQKAVQLMQAPEWDRALLGDLCTAMADASICGLGQAAPNPIRLVMRHFSDEI" gene 399573..400544 /locus_tag="SKA53_02096" CDS 399573..400544 /locus_tag="SKA53_02096" /note="COG0552 Signal recognition particle GTPase" /codon_start=1 /transl_table=11 /product="Signal recognition particle-docking protein FtsY" /db_xref="CDD:10423" /translation="MAFFSKLKERMFKSSAKIDAGLDAIVAEPAPKPGLIGRLLAPTE AQRRALDDAMLEELEDLLIAADMGVETAQRVIANIAEGHLGKRVSVEEVKRLLMAEVV RIMEPVARPLPIYAKTPQVVLVVGVNGSGKTTTIGKLASQFRAAGKNVVIAAGDTFRA AAVEQLQVWGQRAGVPVLTAPEGSDPASLAYDAMTKAQADGADLLMIDTAGRLQNRAD LMEELSKIVRVIRKKDPDAPHNVLLVLDATTGQNAVQQVKVFQELAAVSGLVMTKLDG TAKGGVLVSLADRFGLPIHAIGVGEQIDDLAPFDPEEFAAALVGLDL" gene 400551..401462 /locus_tag="SKA53_02101" CDS 400551..401462 /locus_tag="SKA53_02101" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="possible transporter, DME family, DMT superfamily" /db_xref="CDD:11784" /translation="MDNLAAYLIAVAGTPEGARLATILALVSALAHAVFGALQKGRHD PWLTRGAIDLWLVVFSAPVALFVVPWPNAATALILVGAVGIHFAYKVAMASAYEKAAF TVVYPVVRGTGPLVTVIAASVFFGEHFTPLQWVGMGCLSGGILLLALRNLAEEKLDPA ALRAGLAWALMGGLLVAVYTTYDAYGIRQAPDAFTFLAWFFFVTALDFPVLALHRYRR MDNPPVLAPLMWRGVIGALVAWVSFGGVMLATMVGKVGEAAVLRETSTVFAALIGWFI LREKVGPRRLLLMTLVALGAVIVETGG" gene 401474..402082 /locus_tag="SKA53_02106" CDS 401474..402082 /locus_tag="SKA53_02106" /note="COG2917 Intracellular septation protein A" /codon_start=1 /transl_table=11 /product="intracellular septation protein A" /db_xref="CDD:12266" /translation="MTKTINPILKQVLELGPTLAFFLIYLRIKDDTYTFAGTDYSGFI VAALVFVPILLVAMTILWVLTGKLSRMQVFTAFMVIFFGGLTAYFNDERFFKMKTTIV YGAMAGLLGIGLLRGQSYLQFVMEEFLPMQRAGWMIFTKRLAFIFVVLAIANEIIWRT QSTETWVKLETFAFPAVLFLFLWVQIIGLQKYLIEDPQQSKD" gene 402251..403420 /locus_tag="SKA53_02111" CDS 402251..403420 /locus_tag="SKA53_02111" /note="COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases" /codon_start=1 /transl_table=11 /product="O-succinylhomoserine sulfhydrylase" /db_xref="CDD:10496" /translation="MMSDWNKRTKAVHHGIRRSQYGEVSEAIFMTQGFVYDSAEAAEA RFIKAGADEFIYARYGNPTVAMFEDRIAALEGTEDGFATASGMAAVHGALAAMLKAGD HVVSARALFGSCLYILQEVLTRFGVQVTFVDGTDLAAWQAAIRPDTKVVFFESISNPT LEVVDIKAVADLAHAHGATVIVDNVFSTPVFSDAVALGADVIIYSATKHIDGQGRALG GVILGTRDFIRGTVEPFMKHTGGSMSPFTAWLMLKGLETMELRVRAQAASAQHIAQAL AADGTLRVIYPGLADHPQHALTMAQMGAGGTVMAIDVGSKDAAFALLNRLEIFTISNN LGDAKSIVTHPATTTHQRLDAATKLELGITPGLIRCSIGLEDPDDLLADLRAAIG" gene 403487..404731 /locus_tag="SKA53_02116" CDS 403487..404731 /locus_tag="SKA53_02116" /note="COG1469 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:3156" /translation="MGVAFCGKGDVGMSDLRADLLQFCRIMSGHAPQLRHLRKADAPQ EGFDMNIHARDMDRQPTRSDAEAALALLRRWAGDVSPEEVATLDPLVSRLIPGQEVSN YPALARAYPEDFAVDEAYKASMPDLQNGPSSLIRGAKQQIQHVGISNFRLPIRFRTRD NGDLTLETSVTGTVSLEAEKKGINMSRIMRTFYKHAEETFSFEVIERALDAYKSDLDS FDARIQMRFSFPMKVQSLRSGLQGYQYYDIALELVESAGVRKKIVHLDYVYSSTCPCS LELSEHARQFRGQLATPHSQRSVARISVLVEDGPILWFEDLIERARAAVPTETQVMVK REDEQAFAELNAANPIFVEDAARLFTEQLQLEPRVSDFRVIASHQESLHSHDAVSVLT EGATFATESLDPRLFASLFHVG" gene 404873..405469 /locus_tag="SKA53_02121" CDS 404873..405469 /locus_tag="SKA53_02121" /note="COG0740 Protease subunit of ATP-dependent Clp proteases" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease, proteolytic subunit ClpP" /db_xref="CDD:10608" /translation="MNLVPMVVEQTARGERAYDIFSRLLKERIIFLNGPVHDGMSQLV VAQLLHLESENPKKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSL LLTAGHPGMRFSLPNSRVMVHQPSGGYQGQATDIMIHAAETQKLKTRLNEIYVKHTGQ PLKKVETALERDNFMSPEEAKEWGLIDEIVVNREKSSE" gene 405606..406871 /locus_tag="SKA53_02126" CDS 405606..406871 /locus_tag="SKA53_02126" /note="COG1219 ATP-dependent protease Clp, ATPase subunit" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit" /db_xref="CDD:10937" /translation="MATTTGNDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELC MDIIREETKASGLKSGEGVPTPSDICAVLDDYVIGQVHAKRVLSVAVHNHYKRLNHAD KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENII LKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVA SVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIARRSKGSGMGFGADVKDVDE RGIGEVFQDLEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALITILTKPKNALVKQYQ RLFELENTKLTFTDDALTAIAKRAIKRKTGARGLRSIMEGILLDTMFDLPGMDTVTEV VVNEEAVTSDVQPLMIHDDVKKKEPATAG" gene 407009..407392 /locus_tag="SKA53_02131" CDS 407009..407392 /locus_tag="SKA53_02131" /EC_number="1.6.5.3" /note="COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit" /codon_start=1 /transl_table=11 /product="NADH-ubiquinone oxidoreductase" /db_xref="CDD:26337" /translation="MGLGQSIKRIFTWWDGQTYGTQLWTSRKGVRVGQDAQGNIYYHN ADDSRRWVIYNGEIEGSRVSPEWHGWLHHTWDEPPTEAPLPRKSWEKPHQPNLTGTMA AYAPAGSIRHVAPATRKDYDAWTPE" gene 407397..407792 /locus_tag="SKA53_02136" CDS 407397..407792 /locus_tag="SKA53_02136" /note="COG4765 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKRLSAILACLLLAAPAPAQEMLSGIGADIRILDKLTGAVTDLE VSNGQTDNVGALSVTLGDCRYPAENVASEGYAALVIHYRAEVAPIFAGWMLASSPALN ALDHPRYDVWVLRCITSLGAGTAPVNRAD" gene complement(407720..408364) /locus_tag="SKA53_02141" CDS complement(407720..408364) /locus_tag="SKA53_02141" /note="COG2360 Leu/Phe-tRNA-protein transferase" /codon_start=1 /transl_table=11 /product="leucyl/phenylalanyl-tRNA--protein transferase" /db_xref="CDD:26113" /translation="MQNADLPLTPALVLQAYRLGVFPMSESRDDPDVFWVDPRRRGIF PLDRFHISHSLTRTIRRGGFRVSFDTAFADVVDGCADRAETWINPSIRNLSITLHDQG HAHAVEVWQDAQLVGGVYGIRIGAAFFGESMFSRATDASKVALAYLLHNLRSGGFTLF DTQFLTPHLASLGAVEITRAQYHRMLAAAVGQSARFTGAVPAPSDVIQRRTQTS" gene complement(408366..409712) /locus_tag="SKA53_02146" CDS complement(408366..409712) /locus_tag="SKA53_02146" /EC_number="6.4.1.2" /note="COG0439 Biotin carboxylase" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase" /db_xref="CDD:13908" /translation="MFEKILIANRGEIALRVVRACREMGVKSVAVHSTADSDAMHVRM ADEAICIGPPSSAQSYLSFPAIISACEITGAQAIHPGYGFLSENAAFVQAVEDHGLTF IGPTAEHIRIMGDKITAKDTMKALGVPCVPGSDGGVPTLKDAQRVGEEVGYPVIIKAT AGGGGRGMKVALTAADMEKAFHGARAEAKAAFGNDEVYIEKYLTTPRHIEIQVFGDGK GNAVHLGERDCSLQRRHQKVFEEAPGPVITPELRARIGKVCADAVAAINYIGAGTIEF LFENDEFYFIEMNTRLQVEHPVTEAIFGVDLVREQLRVASGLPMSFTQDDLRINGHAI EVRINAEKLPNFTPCPGTITQYHAPGGLGVRMDSALYDGYRIPPYYDSLIGKLIVHGR DRPEALARLGRALGELIVDGVDTTIPLFHALLAEPAVQSGDYNIHWLEHWLETHLS" gene complement(409721..410206) /locus_tag="SKA53_02151" CDS complement(409721..410206) /locus_tag="SKA53_02151" /note="COG0511 Biotin carboxyl carrier protein" /codon_start=1 /transl_table=11 /product="Biotin carboxyl carrier protein, AccB" /db_xref="CDD:10382" /translation="MSNKTSHDSDVSFIQALAELLRQNDLTELQVKRDYGENDSLNVR VSRHTQTMVQASAPAATAMTAAPAAAAAPAASTNVDPANHPGAVTSPMVGTVYMAPEP TAAPFVAIGQTVREGDTILIIEAMKTMNHIPAPRAGTVRRILVEDGGAVEYGAPLVII E" gene complement(410340..410612) /locus_tag="SKA53_02156" CDS complement(410340..410612) /locus_tag="SKA53_02156" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPYTAQQRQLPDTLVAPVRSAQGSATLPPERPFVAQAVAARLDS SFAEDPAEILPDDRILRPYGVPMLPADKPDDDIMAQPATQDRPQKL" gene 410783..412153 /locus_tag="SKA53_02161" CDS 410783..412153 /locus_tag="SKA53_02161" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, putative" /db_xref="CDD:13119" /translation="MRVVNLVKEILTFQIGAATAGQDQMTIERMTGTRIREKRMDIGL RQASLASAVGISPSYLNLIEHNRRRIGGKLLTDLARALGVDPSHLAGGADRDLLDQLH SAATLAGDMAEIARAEELAARFPGWAGLIALQARRLAVLDERIGALTDRMAHDPFLAT ALHDVISAVTAIRSTAAILVSQEQIDADWQRRFHENIHTDSLRLGKSSEALVAYLEAP ADAEQSPDTPMGQVDTFLAKNGYHLPMIEAETATPDEVVRLSGLTGAAAALLGGICRQ YAADARALPMAAFAQAAQACNYDPALLATRCGTDFATILRRLPCLPPDAGHPPIGLAV CDAAGALLYLKRVPGFAMPTAGGACPLWPLFGALSRPSQPLRAEAILPGATASHLLCY AIATPLAVHHFDLPPVLRSTMLVMPDMAQGSAAPVPVGIACRICPRADCPSRREPAII GTVTAL" gene 412233..412601 /locus_tag="SKA53_02166" CDS 412233..412601 /locus_tag="SKA53_02166" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="response regulator" /db_xref="CDD:5334" /translation="MGKRVLLIEDEPNIIEAIGFILSRDGWTVHTHQDGQTAMAKVLA LPPDMIILDVMLPGRSGFEILRELRSTDVTKDIPVMMLTARGQDKDRDLALRLGANHF MTKPFSNSDVRDYVRAMMDP" gene 412598..412867 /locus_tag="SKA53_02171" CDS 412598..412867 /locus_tag="SKA53_02171" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKPPAKPPVFLERASYRQRRLGDAAQFLPLLGAVLWFIPLLWAT DGPEAPSKSSMLTYIFVIWLVLIGLAALLSRLLPDTDEASDDMRR" gene 412867..415554 /locus_tag="SKA53_02176" CDS 412867..415554 /locus_tag="SKA53_02176" /note="COG0591 Na+/proline symporter" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /db_xref="CDD:10461" /translation="MVSFNILILVALSYVAVLFLVAFLAERRAAVGEANWLRSPVIYT LSLSIYCTAWTFYGAVGYAARSGLEFVTIYLGPSLVMVGWWWILRRLVRIGRAQRITS IADLISSRFGKSRWLGAIVTVIAVVAATPYIALQIQSVTLSLAVFAQSEGAAWSDGDF VRAAMWFAAGLAVFTILFGTRNLDANERHPGIVTAIAVEAVVKLFALIAVGVFVVWGL GGGPVQMMARIDASDLDLWDQDTNRWFGLIFVSAAAFICLPRMFQVMVVENDDEAQMR FASWAFPAYLLAMSLFVVPIAVVGLDLMPAGSNPDLFVLTIPLSQGANGLAMLSFLGG FSSATSMVIVATIALATMVSNHIVVPFWFSLQGDQRGAMSGDVRQLTLLARRLSIAGV LALGFIYYRLSGGGTALAAIGLISFVGSVQVLPALIGGIFWRGATRPAAAAGLLTGLV VWLWTMFLPSFGPGAVIPVAVFADGPFGIGWLRPEALFGIGGIDPLVHGILWSMLLNS AIFVAVSLITFPSPLERLQGAQFVNVFEHGTGARTWSRLVADAEDLLLMSQRIIGQTE AQRMFAREAASQGIPGQMPKATPDFVARLERELGGSVGAATAHAMIGQLTGGSGVSVE DLIAVADEAAQILEYSNRLEAKSAEQEATARALRDANAKLTALSIQKDAFLSQISHEL RTPMTSIRSFSEILRDDDLAIKDRNRYAGIILDESIRLSRLLDDLLDLSVLENGQVVL RPQTGPLSALLDRAIAAAGLHERNLTILRDRAAEDIEITADLDRLVQVFINLISNAAK YCDAKKPALTIRVSRTKGQHRIDFLDNGIGIAAQNQELIFEKFSRLADESKAGGAGLG LAICREIMHRLQGDITYLHGTSGTAFRVTLPVMSAPVVS" gene 415643..416575 /locus_tag="SKA53_02181" CDS 415643..416575 /locus_tag="SKA53_02181" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="possible flagellar switch protein FliM" /db_xref="CDD:11578" /translation="MAGQAVDTPPVSPLTTSRAVRLALVKAASDAGGLVLRVASTADD VGQLDDLLGGLETGLMLVGLDRRGALAGFVAVDMQLRAAMVEVQTTGRLLDQPADDRP ATGADKALCDPLLVAFLSALPPAVMGTAYEGWVDDVTVGGRLADSRLAGLLLEDGDYR VLRMNVELGTGDRQGEVMLVLPVQAAPMVPEEQAPVMDWETAFSAAVQDAPAMLTARL HQFKMPLGRAQALQVGQVVPLPGCTVNSVRLIAPDGRCVAQAKLGQSAGHRAVRIELA PGPEMADLVSTGVSLPEVGFSFDTAEEGEILEGV" gene complement(416723..417148) /locus_tag="SKA53_02186" CDS complement(416723..417148) /locus_tag="SKA53_02186" /note="COG3453 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12781" /translation="MDIRHITPVYAVSPQIDVADIAAIAAAGFTTIICNRPDAEVPPS HQADTIRAAAEAAGITFAVNPVTHQGLNMGMVDSQMAAADASSGPVLAYCASGTRSSI VWSLGQAGKMPTDAIIQATAQAGYDLGGMRGQLDMLAKG" gene complement(417159..417590) /locus_tag="SKA53_02191" CDS complement(417159..417590) /locus_tag="SKA53_02191" /note="COG2391 Predicted transporter component" /codon_start=1 /transl_table=11 /product="YeeE/YedE family protein" /db_xref="CDD:12061" /translation="MRAVVSFLTGGLFGLGLLISGMTDTTKVQGWLDVFGDWDPTLAF VMGGAIIPMAIAWRFTIGRKPVLAAAFPAPPEPRIGRNLVIGSTLFGAGWGLAGLCPG PALASLSYGGTGGLVFLAAMLAGMMLTPGLRVRFDRAVPAT" gene complement(417590..418015) /locus_tag="SKA53_02196" CDS complement(417590..418015) /locus_tag="SKA53_02196" /note="COG2391 Predicted transporter component" /codon_start=1 /transl_table=11 /product="YeeE/YedE family protein" /db_xref="CDD:26198" /translation="MQQDWIMGLIGGGLIGMAGAFFLLVNGRVMGASGIIGGLVDGSG RSDWQERAALIVGLVIVPAIAALAIGGSETNLTSNWMVIVAAGLLVGIGTRLANGCTS GHGVCGISRLSLRGIVSTAFYIGAGGLTMVLFKHVLGVI" gene complement(418039..418902) /locus_tag="SKA53_02201" CDS complement(418039..418902) /locus_tag="SKA53_02201" /note="COG0491 Zn-dependent hydrolases, including glyoxylases" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family protein" /db_xref="CDD:10362" /translation="MKPEVKAFFDEATNTISYVVREPQGNTCAIVDSVLDYDPAAGRT DTTSADAIIAWVKDQGLNVAWILESHVHADHLSAAPYLQEHLGGKIGIGSNITVVQNT FGKIFNEGTAFQRDGSQFDALFNEADTFHIGQLRADVLHTPGHTPACLTYVIGDAAFV GDTLFMPDFGTARCDFPGGSAEDLYNSIQKILALPDDTRIFVGHDYKAPGRDEFAWET TVGEQKAMNIHIGAGKPLEDFVSMRTTRDAQLGMPRLILPSLQTNMRAGNLPEPEDNG ARYFKVPINQL" gene 418045..418926 /locus_tag="SKA53_02206" CDS 418045..418926 /locus_tag="SKA53_02206" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVDRYFEIARAVVFGFGQVARAHVGLQRWQDQSGHAQLGIARGA HGHEIFQRFARADMDIHRLLFAHGGFPSEFIAAWGLVIVTHENPRVVGQGQDFLDRVI QILCRPAGEIAACGAEIGHEQRITHKGRIADHIGQAGGGVAGRVQHIRAQLADVECVC FIEQRIKLRSVALKSGPFVKDLAECVLHDGDVGPDPDLAAQMLLQIGGGGQVVGVDMA FEDPGNIQPLILDPGNNRIGRCRIGAACGGVVIQNAVNNRASVALWFAHNVGNRVGGF IEEGFDFGFHVDSPLWL" gene 418990..419307 /locus_tag="SKA53_02211" CDS 418990..419307 /locus_tag="SKA53_02211" /note="COG0640 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator SoxR" /db_xref="CDD:373" /translation="MSQATDFQLDPMDAAATEAADLLKALSNPGRLRILCALVPGEMS VGDLETALGASQSYVSGQLLRLRNEGLVSCTRDGRSIRYQLADPRVRPLLERIYEIFC PAV" gene complement(419280..420509) /locus_tag="SKA53_02216" CDS complement(419280..420509) /locus_tag="SKA53_02216" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /db_xref="CDD:27630" /translation="MDLGQTARLKPVLAAVKAMIADEIAPLDDEFLSQVDIGDRWQFT PRQAEILEGLKAKARERGLWNFWDTFRDGPSLNTVEYAYLAEEMGKSHLAAEVFNCNA PDTGNMEVFARYGTDAMKTRWLKPLMAGEIRSAYLMTEPDVASSDATNIAMSCVRDGD DYVLNGQKWWATGAGDPRCAVHIVMVRTSDDAPKHQRHSMIVVPADTPGIVKLRAMEV YGHDDAPHGHMHFRYDNVRVPADHLLLGEGRGFEIAQGRLGPGRIHHCMRAIGQAEKA LALMCERSVSRAAFGKPLAELGENYDLIATARMEIEQARLLCLKAAWMMDQGDKRAAA PWISQIKVVAPAVALKITDMAVQMFGAAGVSQDTPLARQWTHLRTLRLADGPDAVHRR QVARAELARYTAGQKIS" gene 420600..421643 /locus_tag="SKA53_02221" CDS 420600..421643 /locus_tag="SKA53_02221" /note="COG3173 Predicted aminoglycoside phosphotransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12511" /translation="MIDAAKDIGMSLATLDGTLSRVVPGFAGAQKVSKFGTGQSNPTY LITAASGRYVLRSKPLGALLPSAHAVEREFRVMQALAGSGVPVPRVLHLADAATSPSG RAFYVMDYLDGRIFWDPALPEVAQDARAAIYNAMNAALAGLHDVDVAAVGLSDFGKPG NYFARQLDRWGRQYLASVAAPSPDMARIMAWLEQAMPPDDGQVALVHGDWRLDNMIFA RGRPDILGVLDWELSTLGHPLADLAYQCMQWRLPNDGRMRGLGGIERAAHGLPTEAEY VAAYCARRGLPMIDNWAFYLVFAFFRLAAILAGVAARADSGNASNPDQARAYGQAVPV LAALALQVTRDGP" gene complement(421640..421855) /locus_tag="SKA53_02226" CDS complement(421640..421855) /locus_tag="SKA53_02226" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MEMVVWIGAALSVIGLIGIGYSVVMVTRAKRANLSDADMRARLA KVLPINLGALGVSVLGLMTVAVGIMLG" gene 421965..422225 /locus_tag="SKA53_02231" CDS 421965..422225 /locus_tag="SKA53_02231" /note="COG3750 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNDSVIDTTSSVAAEELRQFIERFERLEAEKKDIADAQKEVMAE AKGRGYDTKVLRKIIAIRKRDANDLAEEEAVMDLYMSALGMS" gene complement(422230..423111) /locus_tag="SKA53_02236" CDS complement(422230..423111) /locus_tag="SKA53_02236" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQIAFHIGAHCTDEDRLLKSILKNAQILSQQGIAVPGPGKYRSL IREAIQGLAGNDLHPDTRDILLDTITDTEDLRRLVLSNENFLCVPQRIYEHGVFYPQA ETKTRGLHRLFPDDEISLFLAIRNPAGFLQDTLRRIEQTSIDANLGLLEPEDIRWSDV IRRIKQAAPDTPLTVWCNEDSPLIWDQLIRRLSGIDAQSPIVGATDLLAAVLDPEGLS ILSDSLAKAPFDSDTDRHDMIAAIWAEHARPDAVEQDLDLPELDAATVDHLTTLYERD LDVIDAMPGVDLVLPFR" gene 423269..424849 /locus_tag="SKA53_02241" CDS 423269..424849 /locus_tag="SKA53_02241" /note="COG1178 ABC-type Fe3+ transport system, permease component" /codon_start=1 /transl_table=11 /product="putative iron(III) ABC transporter, fused inner membrane subunits" /db_xref="CDD:10896" /translation="MVIAAMVMMPILAVVWFALTPTENIWPHLINTTLPRYLSNTFVL MLSVGTITAVVGTATAWLVVMYRFPGRAVLQWALLMPLAVPAYVGAYALVDFLEYAGP VQTGLRDAFGWTSPRDYWFPAIRTREAAIVVLSAALYPYVYLLARAAFREQSGAAFEV ARALGAGAWGRFLRVGLPLARPAIAAAVAIVMMETVNDYGTVDYFAVQTLTTGIFSVW LQAGNLGGAAQLASTMLAVIVILVLAEKLSRRKIRFFGSARGARPVAPEPLAGWKAWA VTVLCLFPVLMGFVLPLAVITSHALNADMWLAPGLRRAVLHTVTVGGIAAVVTVVGGV FMVYGVRMSRYRLPALLMPVTAIGYAAPGAVLGLGILVPLAAFDNRLADGIVAAGFSD PGLIFTGSAAALVLAYVVRFFAIAQGAADAALGRVSPSLPMAARSLGRTAGGTLRAVH LPLVRASLGSALLLVFVDIVKELPATLLLRPFNYETLATRVHAKAVLENLSEAAPAAL MITLVGLAAVVLLARANR" gene 424951..425023 /locus_tag="SKA53_t03225" tRNA 424951..425023 /locus_tag="SKA53_t03225" /product="tRNA-Thr" gene 425193..426380 /locus_tag="SKA53_02246" CDS 425193..426380 /locus_tag="SKA53_02246" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="symbiosis island integrase" /db_xref="CDD:27722" /translation="MPLSDIQVRNLKPREKAYKVSDFEGLFVLVKPNGSKLWQFKYRM DGKERLLSIGVYPNISLAQARKTKDGARANVAAGIDPSEAKQQEKRQRREVNDQTFEK LGAEFFAKQRKEGKSAATLSKTEYHLQLASRDFGRKPIIEITAPMILKTLRKVEAKGH YETAHRLRSRIGSIFRYAVASGIAETDPTYALRDALIRPTRKHRAAIIDPQALGRLMN EIDVFEGQATTRIALKLLAMVAQRPGEIRHAKWSEIDFVKKVWSIPADRMKMRRDHIV PLPDQAIALLDQLRRMNGNGEYLFPSLRTWKRPMSENTLNAALRRMGYSGDEMTAHGF RASFSTLANESGLWNPDAIERALAHVEKNEVRRAYARGEHWEERVRLANWWAGYLENL QAM" gene 426462..427313 /locus_tag="SKA53_02251" CDS 426462..427313 /locus_tag="SKA53_02251" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDAGDVNLLSLGDHFAERILKIIVFKDLVEKEVGLLSEDRVARL VGGPDQELDDADQANMIRDDAKFRKLARTAPAELLNSRNQEFALWALGLRPEMFADFD YWGKFDKFSLDELVWLSTGLSPRSGSTEKELRRLAKAPAFPLAEIERRRALIIRAFPQ AQRNHVKAVEFCDWASRVGLKWHTGFHEMVEAAAIRVGQDRAGPTEMPPTGSSERAMQ PRQFRTAAKIITAIAIDAYGHVPNEVRSKTTKDILDACDKAGLTVSNDTILKFLRAGE PQMEDPS" gene 427450..427659 /locus_tag="SKA53_02256" CDS 427450..427659 /locus_tag="SKA53_02256" /note="COG3311 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12645" /translation="MSHQQKFPDTGFIRLSQILYPVGPIPVSKSTWWQGVKDGRFPQP QKLGPRTTVWKVEDIRALFESQMDG" gene 428130..429152 /locus_tag="SKA53_02261" CDS 428130..429152 /locus_tag="SKA53_02261" /note="COG4974 Site-specific recombinase XerD" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27719" /translation="MRKINEENERIKRRYLQYLKVAKRKDPSTVLKAAEGILRFEATT GYASFKRFRIEQAIKFQERLNSDVNKATGKPLSKSTIRSVLAANKGFIFWLADQQGYK SRIRHSDADYFNMDAKGARVASAVRETPYPSLEMARHAFSYMPVDTEIAQRNKALFAF LMLTGARDGAVASLRVKHINMIDGCVYQDAREVKTKNSKTITTYFLPVDAAYLECFTA WMTYLRTAALFGPDDPLFPPAKIKPVDGTFKVVGFSRKTYKNANAIRAVIKEAFTRAD LPQFTPHAFRKTLVKWADTVYPSREAFKAFSQNIGHTSVITTISAYCPISTEQQGVLI KSPRSG" gene 429211..429456 /locus_tag="SKA53_02266" CDS 429211..429456 /locus_tag="SKA53_02266" /codon_start=1 /transl_table=11 /product="DNA-methyltransferase, type I restriction-modification enzymesubunit M" /translation="MFESAFNNIDREHRNEKRLASNLEYAEQTSWILFFTYLEDIEQE RQDEADLGGRDYAFVLVKPNGSKLWWPLWLCGLLGRG" gene 429632..430672 /locus_tag="SKA53_02271" CDS 429632..430672 /locus_tag="SKA53_02271" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11588" /translation="MDFMARRPTIKDVAREAGVSATTVDRVINGRTLVREETMRKIAE AANRVGYHGKGIIQGKLKTSVPEVRLGFILLKKSQEFYKNFALQIEKEVSGRPDYRII VDIRFSSSQSPDEFAQLLQDLGRRCHAIACTAVNDKRLDPVVQRLRDEGVVVVSVLND FAQGIRKGYIGLNNMKIGRTAAWMITKTVHQPGKLAIFVGGNRWHGHDLREVGFRSLV REVDRGFTVLDTLVNLETRQVTYEATLDLLHRHPDLKGIYVAGGGMEGAIAALREVHD IPHVALVVNELTAESRSALIDGYAVMAIATPLPELCAALVDQMVESSSKGVEGASSQY FLEPKLILPEIL" gene 430849..431643 /locus_tag="SKA53_02276" CDS 430849..431643 /locus_tag="SKA53_02276" /note="COG4130 Predicted sugar epimerase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13412" /translation="MTTPNLSYVEFLDLAAQLGCVGVEVRNDITRTLFDGLDATSAGK MAADKGLRLVGLSQVYPFNSWDDAREAAVRALIDTAKAAGAETISLIPRNDGTGLGNG ERQAKVRVALKGILPMLKDADLVALIEPLGFGRSSLRSKSELVDVIDGIDGTAYFKLV HDTFHHTLADGGAIFPEYTGIVHISGVVDPSLGIDQMEDEHRVLVDADDRLGNVAQIQ ALLAAGYDGPVSYECFSPQTHALTDPYTAIKRSFEFIASQLKREAA" gene 431776..432666 /locus_tag="SKA53_02281" CDS 431776..432666 /locus_tag="SKA53_02281" /note="COG1879 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative rhizopine uptake ABC transporter periplasmicsolute-binding protein precursor" /db_xref="CDD:11588" /translation="MAENIGVSMALFDDNFLTVLRNGIQEMADGMDGVDVQIEDAQND VARQLDQINNFVASGVDAIIVNPVDTSATQAMTDAAAAAGVPLVFVNRQPVNVDTLPD NQAFVASNEIESGTLETFEICKMLRAQGLGGGAKAYVMMGELSNQAAVQRTKDVEDIL GIDMCNFIEVIDQQTANWSREQANSLMTNWLSSGEEFHAVIANNDEMALGAIQAMKAA GIDMADVVVGGVDATQDALAAMQAGDLDVTVFQNAAGQGSGALNAAIALANGEDVEQK VYIPFELVTPANIADYLSAN" gene 432762..433847 /locus_tag="SKA53_02286" CDS 432762..433847 /locus_tag="SKA53_02286" /note="COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /codon_start=1 /transl_table=11 /product="Sugar (ribose) ABC transporter (permease)" /db_xref="CDD:10890" /translation="MVDKLSHGIGGLTYDKTKRAWPNEANVFIALILIILAFEALGQI LPYMNGQSMLFDFNTSRDGTIMNIARIKIIILQVAIIGIIALGVTQVIISGGIDLSSG PLVGATAMIVMSFAQTELVNGQLNPKAVFGAWSFDLPVIVPIMVGLVFGAFIGGINGF LIAFTRIPPFIATLGMFLICRGISQWWTKGQPVSFPTDAFAAIGSGMMPVVWFAMLAI LLGLIMKFTVYGKHTYAIGSNEDAARMSGINVRRHKILVYMIASMFAAFAAIVLSSKN LTAQAGMGQFYELYAIAMAVIGGVSLKGGRGSMIGTVLGAMVFGVIQSGFTFIKLDAF YQLMAMGAIIIGAVVLDQYRQQRATAG" gene 433860..434642 /locus_tag="SKA53_02291" CDS 433860..434642 /locus_tag="SKA53_02291" /note="COG1129 ABC-type sugar transport system, ATPase component" /codon_start=1 /transl_table=11 /product="Sugar (ribose) ABC-transport system ATP binding protein" /db_xref="CDD:10850" /translation="MSNDYILETRNLTKHYGGVHALEGANFKLRKGEHIAIMGDNGAG KSTFVRQITGVEQRTRGDVIFDGKPVNFVGPLDAREAGIETVFQTLALADDLDVPDNL FLGRELTKWNFLGPFRLLDYKAMHQATMAGLEKTGVKIPNVRNPIRNMSGGQRQCVAI ARTATFHSKLTIMDEPTAALGVQETAQVENIIRTLKEAGEPLILVSHNMRQVFDLVDR VVVFRRGRICADLDIKNDDVTGEDVVGYITGAKTQAGFEDAA" gene 434639..435415 /locus_tag="SKA53_02296" CDS 434639..435415 /locus_tag="SKA53_02296" /EC_number="1.1.1.-" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase" /db_xref="CDD:25396" /translation="MKNGIHSDTAALVIGGTQGLGLAIAKRLVAEGCRRIVIAGRDPV RGEAAALQIGASFMAADLEDTDSILSLVDKAAHRMGRITALVNAGAMTARGSVLDTTP EAFDRMISANLRSPFFAIQRVSQLAIAAGEPAAILNILSMVTHCGQSFLAPYSASKAA LANVTKNAANALRNHRIRVNGINCGWMDTPGEDAVQKKFHNAGDDWLEKAEAQQPFKM LVKPDHVAGLASYILSDAAGVMTGSLVDFDQNVAGAYPEH" gene 435459..436451 /locus_tag="SKA53_02301" CDS 435459..436451 /locus_tag="SKA53_02301" /note="COG0673 Predicted dehydrogenases and related proteins" /codon_start=1 /transl_table=11 /product="hypothetical myo-inositol dehydrogenase protein" /db_xref="CDD:10542" /translation="MSIRFAVLGAGRIGQVHAKAVSSVNGATLVAIADPVAAAAHHIR DTYGCDIRSIDMILTSDDVDAVIICTPTDTHADLIERFIKAGKAVFCEKPVDLDVARA RKVVDTVVAENGLLMVGFQRRFDPDFMALKQAIDEGVIGEVEMVTLTSRDPGAPPVDY IKRSGGIFRDMTIHDFDVARWLLGEEVTSVQAAASVLTDPAIKELGDYDSVNVILMTA SGKQCTINNTRRATYGYDQRIEVHGSKGSVSAENHRESRIEIANGAGYTRPPLLNFFM SRYTAAYANEIASFVDAIANGTPTKTTGMDGLKALELADAALKSAQTGQAVSLA" gene 436566..437450 /locus_tag="SKA53_02306" CDS 436566..437450 /locus_tag="SKA53_02306" /EC_number="3.5.1.10" /note="COG0788 Formyltetrahydrofolate hydrolase" /codon_start=1 /transl_table=11 /product="formyltetrahydrofolate deformylase" /db_xref="CDD:10656" /translation="MNSFALRVQCTSRRGIVAAVSTYLAEAGCNIIDSAQFDDADTGN FFMRVSFRSEEGLPLEKLRSDFAPIADAFGMNAHFFDEAVKPKVVIMVSRFGHCLNDL LYRWRIGALPVDIVAVISNHMDYQKVVVSHDLPFRYINVTKANKPEAEAQIMQVVEET GTELIVLARYMQILSDALCRKMSGRIINIHHSFLPSFKGANPYKQALERGVKLIGATS HYVTADLDEGPIIEQDTIRVTHAQSADDYVSLGRDVEAQVLSRAIHAHVHGRVFINGD KTVVFPASPGSFASERMG" gene 437450..439381 /locus_tag="SKA53_02311" CDS 437450..439381 /locus_tag="SKA53_02311" /note="COG0524 Sugar kinases, ribokinase family" /codon_start=1 /transl_table=11 /product="5-DEHYDRO-2-DEOXYGLUCONOKINASE" /db_xref="CDD:13205" /translation="MTQDHKTTKPLDLITIGRSSVDLYGAQIGGRLEDMRSFEKYIGG SPTNIACGTARLGLKSALITGVGDEHMGRFIVEQLRAEGVNTDGVKIDPERLTALVLL GIRDSEQFPLIFYRENCADMGLTVDDIDEDFVRSARAVVATGTHLSHSRVAAATIKAL HIARADSMRTALDIDYRPNLWGVAGHGDGESRFVESAAVTEKLQDTLHLFDLIVGTEE EFHIAGGTTDTIAALRAVRAVTAATLVCKRGAAGAVAFTGAIPDTLDKGVAGPGFPVE VFNVLGAGDGFMSGLLKGWLDGADWTTALQYANACGAFAVSRHGCTPAYPSWDELQFF FGRGITRPDLRNDAELEQVHWATNRAHNWSSVKTFAFDHRLQLEEMEGYTLAKGGAFK ELCLDAALKVQGGMPGYGILCDNRIGRSALHRASGAGLWIGRPTEWPGSRPIELEPEL GADYGKLREWAAGNVVKTLVFCHPDDDAETRAKQEEVVKRVWAASRRNGLEFLLEVIP SKVAPIDDGTTPRLIQQFYDAGVFPDWWKLEPFRTEAAWSNAVAAIERNDPRTRGIVV LGLDAPEDELAASFALAAKQPLVKGFAVGRTIFGDAARAWMKGEMNDIDAVTQMAGRF ARLCHLWDQARVAAHAYAD" gene 439385..441226 /locus_tag="SKA53_02316" CDS 439385..441226 /locus_tag="SKA53_02316" /note="COG3962 Acetolactate synthase" /codon_start=1 /transl_table=11 /product="iold protein" /db_xref="CDD:13268" /translation="MTPMTKTIRLTAAQAMVRYVAAQMNGNGEQFIAGCWAIFGHGNV AGIGEALYHVKENLPTYRGHNEQTMAHAAIAYAKQLGRKRAMMVTSSIGPGATNMVTA AALAHVNRLPVLLVPGDVFANRGPDPVLQQIEDFNDGTISVNDVFKPVSRYFDRITRP EQLLTALPRAFRTMTDPADCGPVTLAFCQDVQAEAYDYPESFFAPKVWTTRRIRPDLE ELVALAEAIKDAQCPVIVAGGGVHYSGATDALRAFADAHNIPVTETQAGKSALAWDHP LNLGPIGVTGGTPANTVCAKADLVLGVGTRFQDFTTGSWGLFANPARRIACLNVAAYD AAKHDALPLLADAKVGLEALSEALGEHFAKTPVTGLKSDWFDKVDPLTDAPSDTHALP TDMQVVGAVQRAATDATVVMCAAGTMPGELHKLWKSARPMSYHMEYGFSCMGYEIAGA MGIKMAQPDRDVICFTGDGTYMMANAELATAAMMGIAFTVVVTDNRGYGCINRLQMAT GGAEFNNLLDHSVHAQPSAIDFAAHAASMGATSVKVSSIAELEVALASRSDMQGPYVV VIDTDPYPSTPHGGTWWDVGVPQVSQRAKVIAARADYESNKTKQRAD" gene 441226..442131 /locus_tag="SKA53_02321" CDS 441226..442131 /locus_tag="SKA53_02321" /note="COG1082 Sugar phosphate isomerases/epimerases" /codon_start=1 /transl_table=11 /product="similar to MocC (RHIZOPINE CATABOLISM) , also similar tomyo-inositol catabolism iolE" /db_xref="CDD:10804" /translation="MAVKIGISLIAWQNDDLPELTAAYTTEGAMEDAAKIGYQGVERG RRMPADTAGLRAYLDRYGVALCGGWCSGNLMVSSVAQEKEAVRQQVEQFAALNAPCIV YAECSNTIQGAIIRPVSQRPKLSRDEVMAYGAKLSELAKWSADKGCVLSYHHHMGAMV QDAEDIDWLMEGSTSDLTLLYDTGHLHFAGADPVSVLDKWGHRVHHVHFKDVRQPVLD WVHAGDRSFLDGVAAGVYSVPGDPEGCIDFQAITDKLKAMDYQGWIVVEAEQDPAKAP PFDYSKIGYDHIVKICGCSGLTIVH" gene 442185..442949 /locus_tag="SKA53_02326" CDS 442185..442949 /locus_tag="SKA53_02326" /note="COG3718 Uncharacterized enzyme involved in inositol metabolism" /codon_start=1 /transl_table=11 /product="Uncharacterized enzyme involved in inositol metabolism, IolB" /db_xref="CDD:13038" /translation="MHQITPESAGWRYVGFSLYRLIAGDTVAEVTGDREVILVMVEGK AAITGAGQDWGVLGERMNVFEKTPPHCLYLPNGTDWSATAETDCVLAVCTAPGKGGHQ ARRIGPDGITLTARGKGTNTRHINNIAMENEDYCDSLLVTEVFTPAGHWSSYPSHRHD EDDFPRITYLEETYYHRLNPASGFGIQRVYTDDGQLDETMAVSDGEVVCVPRGHHPCG APYGFEMYYLNVMAGPLRKWRFVPAPHVEWIMERDA" gene complement(442963..444075) /locus_tag="SKA53_02331" CDS complement(442963..444075) /locus_tag="SKA53_02331" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11588" /translation="MSRNDLYITSFYIIKFSCNDVNLSAEKMAQRPTIKDLAQAAGVG VATVDRALNSRSNVRQETLDRVLEAAERIGYPTRVLAARREDTTRPLVKFGFVLHKGG QEFYRNFAQELQKAVETRTDIRGRVIIRFAASQAPDDFAKEILEVSRSCDVIATSAIN HPSLSALAAKLIDEGIPVFALLNDFAQGVRQNYLGLNNVKVGRVAAWMIATQARTNGK LAVFVGGNRWHGHLLRETGFQSYIREYAPEFQMLDTVVNLETRQVTYEATLELLSRQP DLRGIYIAGGGMEGAIAALREARPPGKVALVVNELTEESRKGLVDRYITMVIATPLQH LSRDLIGLMINAVRDGPDSTSSQHFMTPQLYVPESF" gene 444122..445240 /locus_tag="SKA53_02336" CDS 444122..445240 /locus_tag="SKA53_02336" /note="COG3239 Fatty acid desaturase" /codon_start=1 /transl_table=11 /product="putative hydrocarbon oxygenase protein" /db_xref="CDD:12576" /translation="MAMTKRDYSLLGPDAALAVENGLAAADWYHTDIPRQQMKALMKR EDQPAIRDTLILFSAMFVFAAIGVALWPSWWSAPFWLAYGVLYGSAMDSRWHECGHGT PFRTAKYNDWVYQIASFCMVRNPVTWRWSHARHHTDTVIVGRDPEIVAMRPPALFRIF LNFFGILDAFHGWQRMIVNASGKLETEEVTYIPQSEHYKVIRVARIWVVIYAGVIAIA VVLQSILPLMIIGLPRLYGAWHHVMTGILQHAGLADNVIDHRLNSRTVYMNPVSRFIY WNMNYHVEHHMFPMVPYHRLAELHELIKQDAPAANPSILQAYKEVWPILLRQLRYHDE FLTRDLPPTARPYRTDLHEGALGDTGARTTTPQAVPAE" gene 445252..445563 /locus_tag="SKA53_02341" CDS 445252..445563 /locus_tag="SKA53_02341" /note="COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases" /codon_start=1 /transl_table=11 /product="putative Rieske-like ferredoxin MocE" /db_xref="CDD:11854" /translation="MANWIDACAAEDIDEEDVIRFDYDGRTFAIYRSPDNVYFCTDGL CTHEQIHLADGLVMDHTIECPKHNGQFDYRTGKAMRAPVCVNLGTYATKVEGDRVLIE I" gene 445751..446770 /locus_tag="SKA53_02346" CDS 445751..446770 /locus_tag="SKA53_02346" /note="COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="putative ferredoxin reductase MocF" /db_xref="CDD:10968" /translation="MLRDKAITLLDGLQAISLDREVRCVTLSTGVKLGYDKLLFATGA SARQLTCDGGERALSLRTVHDAARIYDIAQPGTKVVIVGAGLIGLELAAVLVARGVDV SVLEYAPVALGRNVPRPLAQRIVDRHVSEGSHIFCGVEVDSITAGHVVLADGRMLAAN LVVAAIGVAPRTGLAAVAGLAIENGVCVNDNLCTDDPHVFAAGDCASVQRGGIRQRFE TWQNAQIQGDIAGRNMAGGQHAFDGPVWFWSDQFDLGLQGVGQTNGAVFATRKVDNDA EVLFYVNEASQLVGAVGLGRGNAIAKDIKLAQKLIEAGVSIVAEHLNDPDINLKTLLK PATTA" gene 446780..447595 /locus_tag="SKA53_02351" CDS 446780..447595 /locus_tag="SKA53_02351" /note="COG0413 Ketopantoate hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /db_xref="CDD:10287" /translation="MTMGLYYKRPTVADIRALKGKRQLTMLYVDTPAEAAAAATAGID MLSIIDPVWNDEMREAAGDCFVQVGLLYGELVTQEDYQRAAHRAVKVGGDCVYCASSM GTIKAIADDGIPVVGHVGLIPSKATWTGGFKAVGKTAQSALHVFNHVKRLEEIGCFGA ELEVVPDRVAKEIAERTNLVLLGMGAGPYADAQYLFAEDVLGHTQGHKPRHAKTYRNF KAELDRLQLERIAAFREFKADVDGCAYPGPEHTVTITDAELERFVASLVAAAS" gene complement(448147..451614) /locus_tag="SKA53_02356" CDS complement(448147..451614) /locus_tag="SKA53_02356" /note="COG1002 Type II restriction enzyme, methylase subunits" /codon_start=1 /transl_table=11 /product="RNA-binding region" /db_xref="CDD:10731" /translation="MTIETFINRWKNSGGSERANFQTFANELCDALGVPRPAPATETA AANSYCFEHPVTFIHTGTQSRGFIDLYRAEHFVMEAKQGVGGDQPDTDSQPSLIPDLP NAVRKGHGTRGTRRWDDTMLRARNQADGYARAVSRKDGWPPFLLVVDVGHVIEVYADF SGQGQGYTQYPDGNRYRITMDDLRNEATQDRLRMIWTDPHALDPSKIAAEVTREVADR LAALGKSFEGQGHEPETVARFLMRCLFTMFAEDVDLIPHNSFSDLLTRLRGHPEHAAP ALKGLWETMNTGGFSQVLMVVLKRFNGGLFKDADALPLNAMQLSLLIDAANRDWREVE PAIFGTLLERALDKKQRHKLGAHYTPRAYVERLVVPTIMDPLRSDWRDVQAAALTLAA QGKEDEARAAVRAFHDQLCDIRVLDPACGSGNFLYVALELMKRLEGEVTALLAELGED QAALSLAGHTVDPHQFLGIELNPWAAAVAELVLWIGYLQWHFRTHGTASPSEPVLRDF RNIENRDAVLTCAGTKARLDDAGNPVTRWDGQTTTHPVTGEQVPDAAARIAVLDYLKP QPATWPDAQFIIGNPPFIGASRMRDALGDGYAEALWKAYPDMPQSADFVMFWWDKAAQ AARDWKPATDKAQAKGARRFGLITTNSLRQTFNRKVLEPHLADPKTPLSLTYAIPDHP WVDAGDGAAVRIAMTVAEKGRAMGRLLTVTEEAKGEAEAEGRLVSFDIQKGKIFGNLR IGADVAGASKLIANGLLSSQGVKLHGKGFLVSEAQARAFGYGTDEAIGTLIRPFSNGM DIARSHRSLLTIDVYDRNIDTVRVKHPDIYQWLYDNVKPQRDENSREHRKKFWWLYGD TFEDLRNAIDGLPRHIVTVRTSRYRYFVFKDFPHLPESGLVGIGLSDGWHMAVLSSKQ HLLFMLATCGWLGAGNDPTYNNSICFNKFPFPDPTEAQKTHLRSLGEQLDAHRKERQA THPKLTLTAMYNVLEKLRANERIEGKDKEIYSQGLVGILRDLHDQIDRAVAEAYGWPA DLSDDDILHRLVDLNRTRAAEEARGLVRWLRPEYQNPAGHAATVKADQGAMDLGPAVA TAKEPWPKTLPEQIKAVRAALTDMGEATPDQVARRFARARAGTVQPLLESLTALGQAR IVEGGRFAV" gene 451869..452090 /locus_tag="SKA53_02361" CDS 451869..452090 /locus_tag="SKA53_02361" /codon_start=1 /transl_table=11 /product="transposase" /translation="MSKTTDTFAPEVRERAVRVVFDNEGQHRSRWQAIMSIVAKIGCA PQTLNDWVNNRRLLGPIGNIPPVKAKANF" gene complement(452282..452545) /locus_tag="SKA53_02366" CDS complement(452282..452545) /locus_tag="SKA53_02366" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MERDLGLADLPEQETRLLYAVAIQTRAKPEVSLVELQEHPLMAD ISRSTFFRALKHLIKRGYLEKTGAEKRAGYKLINAPLGLVPLQ" gene 452871..453008 /locus_tag="SKA53_02371" CDS 452871..453008 /locus_tag="SKA53_02371" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTGEIATRRRCAHKASAAFAIAPQGQPHLTAQSQGVRQGFETGA V" gene complement(453189..454124) /locus_tag="SKA53_02376" CDS complement(453189..454124) /locus_tag="SKA53_02376" /note="COG2951 Membrane-bound lytic murein transglycosylase B" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding protein, putative" /db_xref="CDD:12298" /translation="MTTDRRFIIAALGASVLAGCASRRDTSGTTPPDLLPQRNAGYDA WVAGFRRRALAQGVSSTTFDAAFQNVGFLPGVVTRDRNQTEFRRTLQEYLAIAASDER IAKGRAAYARHASVLNAIEARYGVNRYIVTAIWGLESFYGARQGNIPVIAATSTLAYE GRRGAFFEAQTLQALRILQAGDISPARMTGSWAGAMGHTQFIPTTYAEFAVDFTGDGR RDIWAVDPSDALASAANYLARSGWQTGIGWGRENPRGTLEPQRGGPRFTTTANFRAIK RYNNSDAYAIGVGHLADRIAGGAKLQMPFPPTVAG" gene complement(454388..456583) /locus_tag="SKA53_02381" CDS complement(454388..456583) /locus_tag="SKA53_02381" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="possible glycosyltransferase" /db_xref="CDD:11934" /translation="MCAKSDSSPLLQVESGSYSQKDLHMNLCQQCGTAYFTDDDPVDG YDTQDFAQDYWYNYVQNGAGISAMLEPIFALKSNPTGSLLDIGCGFGYVPHFWQTMGR GDAIGLEMSAYGRIGAEKLGITVVPEYYANAEAIKDRRFDYVYSSEVIEHVEDPFEFI KEISTALSDDGILILTTPSATILTPTSNKHVVLATLSPGFHYFVSSKSALSDLLTQSG FDHVKVHDCGHRLFAWASRKALPDIEIGFSAWDLYLDYLKILSDNADHHVAGGAVYRG MKDSYNLGKFDRADWFYECFKKVAKEGLDLDLADIKPALDLSRNRKQLDNHLVPSWMG CALLYAGLIEGRHGHSVSNRLRLISGSIEVMQKEIDLGAQFAGEPAFFIEVAKQEHQK LSYLDSEIGGDKTDIDYTITLRQPRPMKGRDVCIFAAYTSSDRISDATANYINELQNN KIDVILCLAMDNPAQALDLGNINNDTAIILRKNNGYDFGSWTSCLKHLADWHEANRVL LVNDSMFLLPDLLPTFLKKCGECTEDFIAATESYVRQHHAQTYFMILQNKALQSIAFR NFIENFPFLSNKSDVIQNYEISLLSSIKNEFNLSTRILFPMNDLFCNMPQETYAGVNV SHSYWDHLVSQGLPFIKVELIRDNPLNVGILNWKTVFLANGGSVSSAIDHMSIPRDGK VWTENQPRSHTNIDLDSSKKNRSEFLTILKELNRVRLNARARRRDRAKK" gene complement(456769..457680) /locus_tag="SKA53_02386" CDS complement(456769..457680) /locus_tag="SKA53_02386" /note="COG1209 dTDP-glucose pyrophosphorylase" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate thymidylyltransferase" /db_xref="CDD:10927" /translation="MTQRKGIILAGGSGTRLYPITMAVSKQLLPVYDKPMIYYPLSVL MLAGIREIAIITTPEDQGQFQRMMGDGSQWGLAFTYIVQASPDGLAQAYLLAEDFLAG APSAMVLGDNIFFGHGLVDLLRDAAAQTTGGTVFGYQVSDPERYGVVGFDAAGKAVSI IEKPTTPASNYAVTGLYFLDGTAPAKARSVTPSHRGELEITSLLDIYLVQGTLSVQRM GRGYAWLDTGTHGSLLDAGNFVRTLEQRQGLQVGCPEEIAHAQGWIDSATLAKAAATY AKNEYGAYLRGITTNEYGAHQPAPHDK" gene complement(457677..458546) /locus_tag="SKA53_02391" CDS complement(457677..458546) /locus_tag="SKA53_02391" /note="COG1091 dTDP-4-dehydrorhamnose reductase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10813" /translation="MMHVLVFGQTGQVATALAQQTCADITITCLGRDRADLTDPAACA AIIAQTHADVVINAAAYTAVDRAESEPDLARAINATAPAAMARACAARKIPFLHISTD YVFGGSGSRPWQVDDPTGPLGIYGQTKLAGEDAVRAAAGAHVILRTSWVFSAHGANFV KTMLRLGAMRPDINVVADQHGGPTAADDIAAALISIARAFHTGRGISGTYHFSGSPNV SWAGFARTIFASAGIDCAVQDIPTSAYPTPAARPANSRLDCSALARDYAIAQPDWQGS LRHVLQSLQGERQ" gene complement(458543..459592) /locus_tag="SKA53_02396" CDS complement(458543..459592) /locus_tag="SKA53_02396" /note="COG1088 dTDP-D-glucose 4,6-dehydratase" /codon_start=1 /transl_table=11 /product="dTDP-glucose 4,6-dehydratase" /db_xref="CDD:10810" /translation="MKLLITGGAGFIGSAVVRLAIARGHSVVNLDALTYAACLDNVAS VASNPDYAFEQADIRDRAALDRIFAAHRPGAVMHLAAESHVDRSIDGPADFIATNITG TFNMLEAARAYWTATDKPATFRFHHISTDEVFGSLPADKAVKFTETTPYDPRSPYSAS KAGSDHLVRAWHETYGLPVVLTNCSNNYGPYHFPEKLVPVIILNALAGKALPIYGDGS NVRDWLYVEDHADALLLVLEKGVLGRSYNIGGENERSNLQLVRTLCAILDDLRPKASG SYADQITFVTDRPGHDARYAIDPSRIRDELGWRPSVTVEQGLRLTVQWYLDHAAWWQP LQARAGVGQRLGTKA" gene complement(459596..460198) /locus_tag="SKA53_02401" CDS complement(459596..460198) /locus_tag="SKA53_02401" /note="COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose 3,5-epimerase" /db_xref="CDD:4377" /translation="MACAKKRLEETLVQITTTKLAGVLILSPARFGDARGFFSESWNR KTLAAQGITLDFVQDNHSLSAQIGTIRGLHFQSPPHAQAKLVRCGRGCLFDVAVDIRR DSPTYGQWLGEELSDQNGRQLLIPAGFLHGFITRAPDTEIIYKCTDYYAPACDGAVRF DDPDIGIDWGLPAGVAPILSDKDAAAPLLRDLDTPFVFEG" gene 460197..460310 /locus_tag="SKA53_02406" CDS 460197..460310 /locus_tag="SKA53_02406" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMENIDQTLSSAAYFFLGGFSHNLGGLYEILIEEYYE" gene complement(460486..461121) /locus_tag="SKA53_02411" CDS complement(460486..461121) /locus_tag="SKA53_02411" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine-diacylgycerolhomoserine-N- methlytransferase" /db_xref="CDD:11933" /translation="MTDRSHAALMDDTYRYQRWVYDATRAYYLLGRDHLIANLAPPPQ GRVLEIACGTGRNLQHIAQRYPHTALYGLDISQQMLRSAGAKLGARATLAQGDACDFD PRAAFGVAQFDSIIFSYSLSMIPDWQAALHHALDQLTPKGRLHLVDFGQQHRLPAIAR RVLNGWLARFHVTPRHSLPMVLSDLATAQGLTLQMRDLYGSYAQHAVLTRT" gene complement(461125..462348) /locus_tag="SKA53_02416" CDS complement(461125..462348) /locus_tag="SKA53_02416" /note="COG5379 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyltransferase" /db_xref="CDD:14467" /translation="MTPVTDVAGQLDAAVSQNPRFHVTGIQERLFARLFAGLVYAQIW EDPVADMTALALPAGADMICIASGGCNAMSYLTADPASVTAVDLSPAHIALLRLKVAA AQHLDQAAFYDLFGRANLPGNPALVLDQLAPHLDAQTRDYWAGRHLGRKRAGMFARNL YRHGILGRFIGAVHLLARLARKDLRPLLSAQNLDAQRQFHAAVIDPLFDTRIVRVLAR QRTSLFGLGIPPAQYDKLAADGGGDVIDVLRERTRRLVCDFSVQDNYFVWQAFHRGYA DRPDAAVPPYLARQHFPDIAARADRVRALNQSLTDHLATREKAALDAYVLLDAQDWMN DAQLTALWTQITRTARPGARVLFRTGGHADILPGRVPADLLARWHYDAPASALAFAQD RSAIYGGVHLYRFAG" gene complement(462345..463178) /locus_tag="SKA53_02421" CDS complement(462345..463178) /locus_tag="SKA53_02421" /note="COG2908 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12257" /translation="MTIERLTFPPPSPQRTLFISDLHLGALSSRPDLVLRFLQQHRAD TYVLIGDILDLWHPLLPHWTAQDQAVIDHLQARARNGARLIYVRGNHDPDPSLIPPHA RLDADYVASHVHQSLQGKNYLIVHGDEADDRLIRAHMMTRLGSLIDHGLRRCDRLLRK LSRRQPHVRGLVDWLLIAANKMRYRGRIYEQRMVNLARAKGLDGVICGHFHIAALHDR FGLTYANCGDWVDSMTALEDPGDGTLRRLGGREHAFGLAPQISDRMDAATQLVQKAMT R" gene 463390..464541 /locus_tag="SKA53_02426" CDS 463390..464541 /locus_tag="SKA53_02426" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10312" /translation="MTIARPVNALPVPIRPVGQGRPAVPAQRILIVTDAWAPQVNGVV RSYENIIRELRLLGHDVAVISPRDFPTLPLPGYREIALAVFPYRRLARKIARYAPDRI HIAVEGPLGWAARRYCLRHRRPYSTAFHTNFPAYLALRAPGVVRAPLQKLTLWLLRRF HDRAAHTYVATPSITAQLRAWGFTGVVRPLSRGVDAGVFYPPPVPARNDVPVLLYVGR VAAEKNLDAFLGLTTAQTGPVRKVVVGDGPALGALQRAYPDVAFLGTLTGQALADTYR VADVFVFPSRTDTFGIVLIEALACGLPIAAFDVPGPCDIVTDPSLGALDDDLGAAISR ALIAPGTRESRSAHAYERYSWHAVAAAFLGCPGHDQDRPHGSVLHPAAG" gene complement(464626..465867) /locus_tag="SKA53_02431" CDS complement(464626..465867) /locus_tag="SKA53_02431" /note="COG1748 Saccharopine dehydrogenase and related proteins" /codon_start=1 /transl_table=11 /product="saccharopine dehydrogenase family" /db_xref="CDD:11459" /translation="MKRNVLIIGAGGVAQVVAHKCAQNNDVLGDLHIASRTRAKCDAI IASVHEKGAMKQAGVFESHDLDAMDSAAVAAMIGKTGAQIVINVGSPFVNMTVLEACI QTGAAYIDTAIHEDPRKICETPPWYGNYEWKRRDACAAAGVTAILGAGFDPGMVNAFA RFAVDEFMDDVTSIDIVDINAGNHGRYFSTNFDPEINFREFTGTVYSWQKGAWQENKM FEIGREWDLPVVGKQKAYMSGHDEVHSLAANYPQADIRFWMGFGDHYINVFTVLQNLG LLSEQPVTTAEGLEVVPLKLVKAVLPDPSSLAPDYTGKTCIGDLVKGTKNGEEVEVFV YNIADHKDAYTEVGSQGISYTAGVPPVAMAMLIADGTYDLGRMVNVEELDPKPLFTLL DRIGLPTRVQDAAGDRAWDQA" gene complement(465892..466986) /locus_tag="SKA53_02436" CDS complement(465892..466986) /locus_tag="SKA53_02436" /note="COG0019 Diaminopimelate decarboxylase" /codon_start=1 /transl_table=11 /product="NspC, carboxynorspermidine decarboxylase" /db_xref="CDD:9895" /translation="MQTPYYLIDKSCLLRNLEKISWLREASGVKCLLALKCFATWSVF DFMAEHMDGSTSSSLYEVRLGREKFPGETHAYSVAYADHEIAQVLAYSDKIIFNSIGQ LAKFNDASQGHVRGLRVNPGVSTSEFDLADPARPFSRLGEHDPAKIAAVADQISGLMF HNNCENDSFARFDEMLTLIEDRFGAIIHKMAWISLGGGIHFTGADYPLENLALRLKEF SQKFGVQVYLEPGEAAITGAATLEVTVLDTMHNGKNLAIVDSSIEAHLLDLLIYREPA KIAPNTGAHEWMICGKSCLAGDIFGEFLFDAPLKAGDRLSFQDTAGYTMVKKNWFNGV KMPSIAIRELDGTTRLVRDFDYDDFAAALS" gene complement(467115..467207) /locus_tag="SKA53_02441" CDS complement(467115..467207) /locus_tag="SKA53_02441" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLDGKAKHRFETGAPDCVVADILLRMVPAA" gene 467659..468708 /locus_tag="SKA53_02446" CDS 467659..468708 /locus_tag="SKA53_02446" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="efflux transporter, RND family, MFP subunit" /db_xref="CDD:10711" /translation="MFRFLAILFTTAGLSGTLALPLFAQDLLRPVKLMTVADQDHRMT RTFFGQVNGRQTVDLAFQVGGQIQDLPVIEGQFLPAGDMIAQLDMEPFALQLEQAQLQ KNEADRTVDRLRRLAGSAASQVSLEQAETQAQLAALALRDAANRHRHATLQAPFDALV ASRKIANFSTITAGTPVVRLHDMSELWIEINVPEVLFQRFDSEDDVRFHATFPSHATR YPLVVREFTAEASAVGQTFQVTLALQSTDGLHILPGSSATVTAEATGGLQGAVLPASA VGIDPDGSTYVLSFQPEPDGNGTLHRQSVIVQPADDGSFVAINGLEAGVEIVAAGLPV LENGQRVRRFSGFGN" gene 468720..471782 /locus_tag="SKA53_02451" CDS 468720..471782 /locus_tag="SKA53_02451" /note="COG0841 Cation/multidrug efflux pump" /codon_start=1 /transl_table=11 /product="transporter, AcrB/AcrD/AcrF family" /db_xref="CDD:10708" /translation="MNIARAAIDRALLTWILIIGCLLGGLWGFNSLGRLEDPAFTIKT AVIVTQYPGASAEQVAVEVSEPLETAIQRMAEVARISSVNQPGQSLIEVEIHATYDSD TLPAIWVKLRNRISDAARGLPQGVTAPVVNDSFGDVFGIYYAVVAEGLSNAEKHQLAS FLRRELLVVDGVADVEVRGLPREVIYVEPDMVRAVNMGVAPQAIAGAIANANSVVDAG AQDIGSARTLIQAPEGSDSVSAIAGLSLGVEGQVLSLFDMAHVYRGVEEHPAIIVHHN GEDAFTLGIAGASSENIVDVGSRVDQRLAELELDMPYGVTLHPIYQQHLVVQTASNDF LINLFLSVLIVVLVLALFMGCRAAVVVGTTLFLTVVGTLFFMAIFAIEMERISLGALI IAMGMLVDNAIVVAEGMQIAMQRGKSSRDAAEDVARKTQIPLLGATVIGIMAFAGIGL SPDATGEFLFSLFAVIGISLLLSWILAITATPLLGHYLFRQGAAGGADAYDGRLFRLY GSVLHAAIRARWLVVVALLVVTVACYAGFGQVKQQFFPDSNTPLFFAHYKLSQGTSIH TTSAHLDHLQQWLSKRDEVVSVTAFAGDGAARFMLTYAAERANASYGHLIIRTRTLDD IPALKADLDAFARETLPQGEFRTKRLAFGPGGGDPIQLRLSGSDPAVLRQLAETARAV MQDASPNLRDLRSDWREQELVLAPIYASDRAQAAGIDRDDIAQSLLFATEGTVGGVYR EDERLIPIVVRQAPSAGLALMDQVVYSSSANAFIPIEQAIDGLQFEVQNTLLHRRDRV LTLTLSADVAPGLTTATVQQEIRAAVAAMPVPNGYSVAWGGELESSMDAMTSLGQQLP VSVIVMVLISIVLFSALRQPLIIWLLVPMSVNGVVIGLLATGIPFSFTALLGLLSLSG MLIKNGIVLVEEIDLVRAEGIALREAIVIACVSRLRPVVLAAATTILGMAPLLGGCFL RVDVHHDHGRACLCLGADLDCRAGALRSVLFARRGRHACWCRRALIKA" gene 471637..471771 /locus_tag="SKA53_02456" CDS 471637..471771 /locus_tag="SKA53_02456" /note="COG0841 Cation/multidrug efflux pump" /codon_start=1 /transl_table=11 /product="transporter, AcrB/AcrD/AcrF family" /db_xref="CDD:10708" /translation="MSMSITIMGGLAFASVLTLIAVPVLYDLFFSRDEVGTPAGAGAR " gene complement(472016..472738) /locus_tag="SKA53_02461" CDS complement(472016..472738) /locus_tag="SKA53_02461" /note="COG3473 Maleate cis-trans isomerase" /codon_start=1 /transl_table=11 /product="Asp/Glu/Hydantoin racemase family protein" /db_xref="CDD:12801" /translation="MTAFPYDLQDDSLPRLGLIVLQVDETIEQDFRHLFAPDSVKLHI SRIPSGAELTPDSIAQMETALPTAAGPLPPGLDVVGYACTSGTTLIGAGRVRDLVMGA AQTRAVTDPLTAALAKCRVLGLTRIGIVSPYIASVATPIRAAFESAGITVPATLSFGE EVEAKVARIAPASIANAARALARQAELDGIFLSCTNLRTRDILAPLSVELGLPVLSSN QCLGWHMASLCGMPPPYGHGSV" gene complement(472735..473901) /locus_tag="SKA53_02466" CDS complement(472735..473901) /locus_tag="SKA53_02466" /note="COG0006 Xaa-Pro aminopeptidase" /codon_start=1 /transl_table=11 /product="metallopeptidase, family M24" /db_xref="CDD:9882" /translation="MAEPMMIFAAQEYRDRVAKLQMGMAAQGLDALLLTTPADVFYVT GFLTRFWASPARPWFVIVPVADDPVAVIPSIGAALMGQTWLHDIRTWDAPDPRDDGIS LLTGALADLVPAQGQIGVPMGLETHLRMPLADYDLLRAQLAPRQIVDATACIQRIREV KSEAEINKIRESCAIAGRAFARVPEFAAEGQPLSCVFRDFQIALLTEGADWVSYVAGG AGPDGYGDVISPAGPQPLRRGDILMLDTGAVKNGYFCDFDRNFAIGRASDTARRAHAA LWQATEDTLALLRPGWRACDVHAALCANLQKYGATPSGGRLGHGLGITLTEWPSFTPL DETPLREGMVLTLEPGCVTGDGRIMVHEENIVLRKDGAEVLSPRASHELPEITA" gene complement(473894..474973) /locus_tag="SKA53_02471" CDS complement(473894..474973) /locus_tag="SKA53_02471" /EC_number="4.3.1.15" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="diaminopropionate ammonia-lyase" /db_xref="CDD:10889" /translation="MHYSGPVRNGVFMGQNLKNPWRGSGLPGETLFPLADARDVGQLL ARCPAHAPTPLRQEPALAAHLGIGQLWLKDERGRMGLGSFKALGAAYAIARAAAATNA PDLRHALQGQVYVTASAGNHGLSVAAGAQLFGAAAVIYLSQAVPETFAARLQAKGATV VRDGADYEASMQAATRAADANGWTLLSDSSWPGYTALPLRVMEGYLQLAAEAAAQIDQ PPTHILLQAGVGGLAAAVAAHARHVWGDSPQIIVVEPDAAPALIESIRAGRLVDTTGP VSGMGRLDCKTASMIALHGLARDADDFVTISENTAQRAVDLLAEYQLPTTPSGAAGVA ALLAGLDLPREARVMAILSEGPEDG" gene 475110..475571 /locus_tag="SKA53_02476" CDS 475110..475571 /locus_tag="SKA53_02476" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11236" /translation="MDIFDARLLNALQSRARATAEELSALVGLSPDACRKRVARLRAS GLIEAEIAILDPARAGRGLMLIVEVTLQNERKRDLDRFKSAMQAAPEVMQCYYVTGNA DFILMISARDMAEYEAFTRRHFFAEDNVLRFRTSAVMDRVKTGFAIPVEGD" gene complement(475653..476882) /locus_tag="SKA53_02481" CDS complement(475653..476882) /locus_tag="SKA53_02481" /note="COG1940 Transcriptional regulator/sugar kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11648" /translation="MKGRYKCPKWQVKVCQMDDGLVRSLSMGLSQKGVRDHNERLLLS LLQRHGSLPAPDLARLSHLSPPTISAILRKLESDGLLTRGDPLRGKVGKPSVPMMLDK NGVYSIGIKIGRRSANFLLTDFTGGIRLHRQVTYTHPLPREVFGFVQAGLAAAASDLS HSELARICGIGIAAPFDLWNWHDLTGPNAAEFQSWKNIDFTAEMARFTDLPVFVINDA TAGCQAEHLYGRGKQFRDYAYFFVGAFVGGGIVLNNAVYEGRLGNAGALGSLRSVGPS GESRQLVDTASIHTLEARLRQAGHNPITLWNNPQSWTDLADHVTPWLDQTAIELAKAS LSTCAVIDFEAIIIDGAFPPVIREELVKKVRRAIETEDTRGLILPVIESGSIGSDARA LGAACSPVLSQFMLNNN" gene 477006..478025 /locus_tag="SKA53_02486" CDS 477006..478025 /locus_tag="SKA53_02486" /note="COG1879 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC sugar transporter, periplasmic sugar binding subunit" /db_xref="CDD:11588" /translation="MKKLLISTALVAITSVAATSVQAQGVSACLITKTDTNPFFVKMR EGAEAAAAQAGITLRSYAGRVDGDHETQVAAIETCIADGASGILITASDTSSIVGAVT QARDAGLLVIALDTPLEPIDAANATFATDNFLAGELIGQWAAASLGDAAGDARIAMLD LAVSQPSVDVLRNQGFLQGFGIDLGDANRIGDETDARIVGNDVTAGNEEGGRRAMENL LAIDPMINVVYTINEPAAAGAYEALRSIGRENDVLIVSVDGGCPGVQNVADGVIGATS QQYPLRMAALGIEAIAAFAADGTMPENTPGKDFFDTGVALVTDIPADGVDSINVAEGQ NLCWG" gene 478125..479213 /locus_tag="SKA53_02491" CDS 478125..479213 /locus_tag="SKA53_02491" /note="COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC sugar transporter, inner membrane subunit" /db_xref="CDD:10890" /translation="MSSQKDDFEAVVKTGAPGTVAAFAPARKGGLAQIQHMLHLQPAL VPLFVLAMSILTFGLLLGTKFFSPFALTLILQQVQIVGIVAAAQSLVILTAGIDLSVG AIAVLSSVIMGQFTFRYGLPVEVAVLCGLAFGTAIGTLNGWLVAVMKLPPFIVTLGMW QIVLAANFLYSRNETIRAQDIESQASLLQFLGTTFKVGANDAGQGGATFTYGVIAMVL IFVILAYMLRHTAWGRHIYAVGDDPDAAQLSGVNVRATIISVYALTGFVCAIAGWALI GRIGSVSPTSGQLLNIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLAGA DAQWTFLLIGVLIIAAVAVDQWIRKVSG" gene 479189..479980 /locus_tag="SKA53_02496" CDS 479189..479980 /locus_tag="SKA53_02496" /note="COG1129 ABC-type sugar transport system, ATPase component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10850" /translation="MDQKGIRLMEPILQGRGLVKRYGRVTALDHCDFDLYPGEILAVI GDNGAGKSSLIKAMSGAIIPDEGDVMLEGRKVRFTSPNDARREGIETVYQTLAMSPAL SIADNMFMGRELRKPGIMGKVFRQLDRPRMERLAREKLTELGLMTIQNINQAVETLSG GQRQGVAVARAAAFGSKVIILDEPTAALGVKESRKVLELILDVRARGIPIILISHNMP HVFEVADRIHIHRLGKRLCVINPGDYTMSDAVAFMTGAREPETAA" gene 480155..481723 /locus_tag="SKA53_02501" CDS 480155..481723 /locus_tag="SKA53_02501" /note="COG4651 Kef-type K+ transport system, predicted NAD-binding component" /codon_start=1 /transl_table=11 /product="glutathione-regulated potassium-efflux system protein KefC,putative" /db_xref="CDD:13795" /translation="MFEVICISFAFFFGLAVRQVGLPPLVGFLAAGFAINAVGPSLGV PEETGEILKYVAHLGVLLLLFAVGLKLRVEQVFQPQVLAGSLVHFAVTASVFTLGLAV FLQLDWNTALLLAIALSFSSTVFSAKILDAKRDLGSFYGRTAIGILIVQDVIALVVLG IWSGQTPTVWALGVFAIPLLRPALHRLLDFTGHDELLVLMGMLLALVVGGMGFESLGL SAEIGALVMGLLLSTHRRAKELSDALWALKEVFLVGFFLQIGMSGLPDLDDLVFAGVF ALVLPLKGVLFFFLFILFRMRARTSFMAAASLTAYSEFGLIVAAGVLTEWLVPLAVAV SLSFVVSAPLNRLSQRFFDRYEDRLQRFELSRVHVDELPTDLGNARILILGMGRIGTA AYDHLSPVCDRIVAIDADTYKTTAHRAAGRNVWFADVEDAGFWRGLDISLLKVVILAM DNVEAKECSARALRRNGFEGAIVSHALFEDHIDRLTSAGATHTYLTMNQAGMGLADHA ARAIALAVPGDDGA" gene 481751..481957 /locus_tag="SKA53_02506" CDS 481751..481957 /locus_tag="SKA53_02506" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLMNEKPKKVARHGDNIAVKTTQTGLVRLALVMEQMGIATPRRW RLIRMPVRNGRRSWLIAPQQPPTI" gene 482009..482956 /locus_tag="SKA53_02511" CDS 482009..482956 /locus_tag="SKA53_02511" /note="COG0042 tRNA-dihydrouridine synthase" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase A" /db_xref="CDD:9917" /translation="MMDWTDRHCRYLHRLMSRHVLVYSEMVTAPAVIHGDRDRLIGYG PAEHPVALQLGGSDPALLAQAARIAADMGYDEVNLNCGCPSDRVQSGFFGAVLMENAA LVAECVAAMIAAVDIPVTVKCRIGVDDQTPSDVLPDFIARVSAAGVDRFSIHARKAWL QGLSPKENRDIPPLDHDLVIAMKALFPHLHLSVNGGITSLDQAQDFLDRGLDGVMIGR AAYHTPCDILLDADARIYADPSGRSAEDVVHLMLPYIAEHLQNGGRLGQITRHMLGMF QGRPGAKAWRRHLSEHAHQDGAGPQTVLAALAHVTQAAA" gene 483018..483836 /locus_tag="SKA53_02516" CDS 483018..483836 /locus_tag="SKA53_02516" /note="COG0730 Predicted permeases" /codon_start=1 /transl_table=11 /product="membrane protein" /db_xref="CDD:10599" /translation="MPETMLLVQMALFLLVVGAFAGVLAGLLGVGGGIVLVPAFFYVF SVLGFDSPQLMQICLATSLATIIVTSVRSLLAHHRKGAVDWAILKSWAPGIAIGAVIG VMVAASLRSGTLQVVFATLAATVAIYITFGKSHWRLGPVMPGGILRAVLSPVIGFLSV LMGIGGGSFGVPIMTLFNVPIHRAVATAAGFGVIIATPSVAAFMLIDIAVAPPFTIGA VNLVAFVLVIAMTLITAPWGAALAHRTDPIRLKRVFGAFLILVALNMLRKAVGW" gene 483833..484594 /locus_tag="SKA53_02521" CDS 483833..484594 /locus_tag="SKA53_02521" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIQTLHDDGFAVLPHDPAVARWAVAANAACDQMLQRGPPLRHGG TWCVGVDALDNGPDGSVDGVPLAGAWRDLVPVPDHWHRAQLSVVFPGYPAQDAGDTDA AHAFRVNRCAAHVDGLHAEGTPQRRHLREAHTFILGLPLNPSMASPLVVWPGSHTVMR ATFAACFDGVPPTHWGDIDVAAAYQDARRRVFASCPQVAVTALPGQVVMLDRHLLHGV APWDASITDQCRKLAYFRPLGAVADWLSPSFRRAL" gene complement(484531..485229) /locus_tag="SKA53_02526" CDS complement(484531..485229) /locus_tag="SKA53_02526" /note="COG2378 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12050" /translation="MRRADRLMQLVQILRDGSLHRAQDLAAAVGVSLRSIYRDMETLA ASGVPISGERGIGYRVTAAITLPPLNLTLTEVEALHLGLSAVGAADDPDLAQAARQLL AKLDAVMPENPASAPAHGFAIYPFADAARGFQHLPRLRQAVRTRQKLALTLQGEDRTV RPLQLEYWGRLWTCVVWCEKRRDFDVIRVDQITALRVLPSLFVAEAGKSLNDYKARRK DGDSQSATAPSGRK" gene 485423..485641 /locus_tag="SKA53_02531" CDS 485423..485641 /locus_tag="SKA53_02531" /note="COG1826 Sec-independent protein secretion pathway components" /codon_start=1 /transl_table=11 /product="twin-arginine translocation protein, TatA/E family" /translation="MLNNIGLPGLILIAVVVLVLFGRGKISSLMGEVGKGITAFKRGV DDSKKELDDNLAEPRDVTPEDQKAKDKV" gene 485683..486114 /locus_tag="SKA53_02536" CDS 485683..486114 /locus_tag="SKA53_02536" /codon_start=1 /transl_table=11 /product="twin-arginine translocation system protein, TatB" /translation="MSEMVLIGIVALIVIGPKDLPGMFRALGQFTGKARGMAREFSRA MEAAADESGIKDVSKTIRAASDPKKFGVDALKDATSFTKGPATQELAAQRKAAKAKAD ELAKTTQENAARAAVKTAPAKTPAPKPEAPAAVADTPKDKA" gene 486111..486977 /locus_tag="SKA53_02541" CDS 486111..486977 /locus_tag="SKA53_02541" /note="COG0805 Sec-independent protein secretion pathway component TatC" /codon_start=1 /transl_table=11 /product="twin-arginine translocation system protein, TatC" /db_xref="CDD:16847" /translation="MSKSDEIEDSSAPLIEHLAELRTRLIRSVLAFIVGMIISFTVWN PLFNFLTLPLCDALAARDQSCDLQFIALEEGFFVAISISLLGGLIIGFPIISYQLWRF VAPGLYKSEQGAFFPFLVASPFMFFLGAAFAYYVITPLAFGFFLGFQQPGTVMSGTDG STQAAGILFQGSAKAYLSLTIKFIVAFGLCFQLPVLLTLMGKAGLVSARGLRGTRKYA VVGILIVAALATPPDVISQVILFVVVYGLYEVSIQLVARVERKREAKLRAEGLWDDDL HGDGAMDDEPKS" gene 487019..487816 /locus_tag="SKA53_02546" CDS 487019..487816 /locus_tag="SKA53_02546" /note="COG2607 Predicted ATPase (AAA+ superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12124" /translation="MHPAPQKAPDFAAASAFVWHTQPDRLEPVGRINRIDVSLLVGVN RSRDTLLANTQRFAAGMPANNALLWGARGMGKSSLVKAIHGAVQAEHPALKLVEVQRE DLPSITRCLNLLRSSDARFILFCDDLSFGHDDAHYKSLKAVLDGGIEGRPDNVVLYAT SNRRHLMPRDMIENERSSAISPSEAVEEKVSLSDRFGLWLGFHPCDQDDYLAMIRGYC DAFGVTIDDVTLRAEAIEWQATRGSRSGRVAWQYFTDLAGRQGVRLP" gene complement(487839..489041) /locus_tag="SKA53_02551" CDS complement(487839..489041) /locus_tag="SKA53_02551" /note="COG0739 Membrane proteins related to metalloendopeptidases" /codon_start=1 /transl_table=11 /product="Peptidoglycan-binding LysM (possible peptidase)" /db_xref="CDD:2090" /translation="MAQGQSTIRTLLLTSVALAALAACEGFDPDMRDLGNGFSTASAV QDLPKRPRPDDRGVISYPTYQVVVAQQDDTIRGIAIRLGLDANTLAQYNGIEPDTILR RDEIVALPSRLPDGAIAPDAPVAQQPFDVAAVATSALDRADAEGGQITATALPPADQA APPAAVAPATAAIGAEPIRHQVVRGETAFSISRLYNVPVTAIAEWNGLNSEFTIREGQ YLLIPQGGATPQRAPAAVVTAPGAGSETPVPPSAARPLPAATAPVAAPQTPDTGTPAP APAPAAASASRLAAPVQGSIIRAYAPGTNEGVDFGVPAGTDVRAADAGSVAAVTTDTS GGSIVVIRHADGLLTVYTQMDNLTVQKDASISRGQVIGKVRAGNPSFLHFEVRRGLQS VDPMDFLP" gene complement(489104..489745) /locus_tag="SKA53_02556" CDS complement(489104..489745) /locus_tag="SKA53_02556" /note="COG2518 Protein-L-isoaspartate carboxylmethyltransferase" /codon_start=1 /transl_table=11 /product="protein-L-isoaspartate O-methyltransferase" /db_xref="CDD:12113" /translation="MSFDADTKMQFLYALRSKGVTDTRVLTAMEQVDRAAFVRGIFAD RAYEDMPLPIACGQTISQPSVVGLMTQALQVNPRDKVLEIGTGSGYQAAILSKLARRV YTIDRYRSLAEKARQIFADQQIANIITFTADGSHGLPDQAPFDRILLTAAAEDPPGPL LAQLRVGGIMVLPVGQSDAVQSLIRVTRLDTGYEYDELRAVRFVPLLEGLGQE" gene complement(489742..490527) /locus_tag="SKA53_02561" CDS complement(489742..490527) /locus_tag="SKA53_02561" /note="COG0496 Predicted acid phosphatase" /codon_start=1 /transl_table=11 /product="Survival protein SurE" /db_xref="CDD:10367" /translation="MRILITNDDGINAPGLQVLTRIAQDIAGPTGEVWTVAPAFEQSG VGHCISYTHPTMIAELAPRRFAAEGSPADCVIAGLYDVMHDARPDLVLSGVNRGNNAA ENTLYSGTIGGAMEAALQGIPAIALSQYFGPDNRDLADPFDAAIQHGADVVRRLMARD LWDEADYRLFYNVNFPPVAGADVKGMRAAAQGFRRGTHFSAEAQTSPSGRRFLWVRGG TQDVPTDPGTDAAVNLDGYISVTPMRADLTDRAMLPLLQEALA" gene complement(490644..491288) /locus_tag="SKA53_02566" CDS complement(490644..491288) /locus_tag="SKA53_02566" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="oxidoreductase, short-chain dehydrogenase/reductase family" /db_xref="CDD:25396" /translation="MTQIVLITGASRGLGAALARQLAPTHHIIAVAKTVGALEELDDA VQAAGGAATLAPMDITVDAAMQQLCRGIFDRWGKLDMWLHTAVHAAPLAPAGHIGPKD LTKSMTFNVEATARLIAYVSPLLGQTGKAVFFDDPRGGQQFFGAYGATKAAQIALARS WQAETVKTGPRVQILTPAPMPTATRARFYPGEDRSTLTEPTAEAARLLPQILAD" gene complement(491341..492810) /locus_tag="SKA53_02571" CDS complement(491341..492810) /locus_tag="SKA53_02571" /EC_number="2.4.2.14" /note="COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase" /codon_start=1 /transl_table=11 /product="amidophosphoribosyltransferase" /db_xref="CDD:9909" /translation="MSCKDLPTHPFDDDKLREECGVFGVVGITDASNFVALGLHALQH RGQEAGGIVTHDPATGFNQARRMGLVRDNFTNQKVMETLPGTIGIGHVRYSTAGSKGQ TAIRDVQPFFGEFSMGGAAIAHNGNLTNARALRKELIERGSIFQSSSDSECIIHLMAR SMGRNIPDRMEEALRKVEGAFSIVAMTRTKLIGCRDPLGVRPLVLGQLGDGWVLSSET CALDIIGAEFIRDIAPGEMVVISDKGVQSHFPFRRAKSRFCIFEHVYFSRPDSILGDR SVYETRENIGRELAKEAPVDADLVCPVPDSGTPAAIGYSLQSGIPYAMGIIRNQYMGR TFIEPSEQIRNMGVRLKLNVNRALVRGKRIILVDDSVVRGTTSQKIKDMILDAGAAEV HFRIASPPTAWPCFYGVDTPQRDKLLAATMTEEEMRVHIGVDSLKFISLDGLYRAVGQ PNGRDPASPAYCDACFSGEYPVAPSDMIEDGFQTKTAAQ" gene complement(492972..493574) /locus_tag="SKA53_02576" CDS complement(492972..493574) /locus_tag="SKA53_02576" /note="COG1286 Uncharacterized membrane protein, required for colicin V production" /codon_start=1 /transl_table=11 /product="CvpA family protein" /db_xref="CDD:5491" /translation="MDGFTLVDAGVAIIILLSGVLAYSRGLVRETMAILGWIGAAVIA FTFAPQVEPLVRQIPIVGDFIGDSCELAIIAAFAAVFALALVIVSIFTPLFSSVVQRS AIGGIDQGLGFFFGVLRGILLVAVAFFVYDTIFATQQIAAIDNSRSADVFAQLTARIE AQNPEQALGWITQQYQDLVGNCGAPATEITPITAPAPVTE" gene complement(493602..494966) /locus_tag="SKA53_02581" CDS complement(493602..494966) /locus_tag="SKA53_02581" /note="COG1066 Predicted ATP-dependent serine protease" /codon_start=1 /transl_table=11 /product="DNA repair protein RadA" /db_xref="CDD:10790" /translation="MAKDLSFTCSECGAAYSKWSGQCDACQSWNTISENKALASGPKG KSLGALRGKPIPLIDLDTHEPEPPRTQAGVAELDRVLGGGLVKASALLVGGDPGIGKS TLLLQAAARFARNGLKVIYISGEESTAQVQMRARRLGLEKSPVRLAAETNLRDILTTL EAEKPDLAIIDSIQTMWADHVDSAPGSVSQVRASAHELTTFAKRNGMSVVMVGHVTKD GSIAGPRVVEHMVDTVLYFEGERGHQFRILRAVKNRFGPADEIGVFEMTGKGLAEVKN PSALFLSERGAPAPGSVVFAGIEGTRPMLCEIQALVAPSPHSQPRRSVVGWDGGRLAM ILAVLESRCGVPFTGLDVYLNVAGGLRISEPAADLAVAAALVSAREDAAVPSDAVIFG EISLSGALRPVVQTENRLKEAEKLGFTSAITPQQAKQVAVKGINLRQAHDLAAFVEDV FGAR" gene complement(494969..495436) /locus_tag="SKA53_02586" CDS complement(494969..495436) /locus_tag="SKA53_02586" /note="COG2995 Uncharacterized paraquat-inducible protein A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12339" /translation="MRQALVIANLSLLILFPVAWFAPLMRAGLLPLFSLSEISVITGL QSLWGSDVVLALVVTALAVFLPYLKTILLALVHFGLLADRSLPMLGWLGKLAMADVFL IALYIVVFKSMGWGRVETAWGLYLFTACVLASILISGLTARDRLHASPDQAKS" gene complement(495437..496474) /locus_tag="SKA53_02591" CDS complement(495437..496474) /locus_tag="SKA53_02591" /note="COG0787 Alanine racemase" /codon_start=1 /transl_table=11 /product="alanine racemase" /db_xref="CDD:27994" /translation="MSTGRLTIDLDAVVANWRALDAMTNCKTAAVIKADGYGLGSVNI AKALFKAGVRQFFVAVAEEAAPIRAELGPRPEINVFSGHMKGDTAAIRDLNLTPMLNS VEQVTHHFETLPGHPFGIQLDTGMNRLGLEMQEWAAIAGLALDQNPTLVMSHLACADE PDHPMNPHQLANFHMMTDGISVPRSLSATGGILLGPDYHFDLTRPGIGLYGADPFSDG TPVIELEFPVVQIRDVAQGEVVGYGNSWQAERASRIATISGGYADGIIRSLSDRAIFY HGKTPCKLVGRVSMDLMTIDVTDLSEDPKALSLICAEQTVDDVARRAGTIGYELLTQL GGRYTRRIYGK" gene complement(496532..498025) /locus_tag="SKA53_02596" CDS complement(496532..498025) /locus_tag="SKA53_02596" /EC_number="3.6.1.-" /note="COG0305 Replicative DNA helicase" /codon_start=1 /transl_table=11 /product="replicative DNA helicase" /db_xref="CDD:10179" /translation="MNEIATFNASGTTDASVDLMPHSIEAEQQLLGAILTNNDIFDRV AAIIGPKHFYDPVHARIFETAATRISKNALASPVTLKTFLEDDEGLKELGGPAYLARL AGAAISAFAARDYAQMIYDLAVRRELIQVGRNIADKAAKVDVDSEPKDQIVEAEQALY ALAEQGTTDQGFQSFLRAVTDAVNMANAAYQRDGGMAGVSTGLIDLDKKLGGLHKSDL LILAGRPSMGKTSLATNIAFNIAKAYKKGILPDGTEGAVDGGVVGFYSLEMSAEQLAA RILSEAAEVPSEQIRRGDMTETEFRRFVDAAKSLEACPLFIDDTPALPIAQLAARARR LKRTHGLDVLMVDYLQLVRGTGRSENRVNEISEITMGLKAIAKELNIPVIALSQLSRQ VESREDKRPQLSDLRESGSIEQDADVVMFVFREEYYKEREKPGDHEMEKMAAWQEEME RLHGRAEVVIGKQRHGPIGTVELSFEGKFTRFGNLVKPWQQGGDQQF" gene complement(498224..498895) /gene="pyrE" /locus_tag="SKA53_02601" CDS complement(498224..498895) /gene="pyrE" /locus_tag="SKA53_02601" /EC_number="2.4.2.10" /note="COG0461 Orotate phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="orotate phosphoribosyltransferase" /db_xref="CDD:10334" /translation="MIPSCYPDKAEIARLSASMLLEIGAIAFNAREPFTHASGKKAPT YVDCRKLISFPRIRSTLMDFLSVTIMREAGFEAFDNIAGGETAGIPFAALVAERLALP MTYVRKKPKGYGRNARIEGVMTEGQRVLLVEDLTTDGGSKLSFVDAIRETGATCCATA VIFYYGIFDGVEQTLADHGVQLLHLCTWWDVLAEAKARGAYDPETLAAVEAYLHDPAG WQASA" gene complement(498952..500004) /locus_tag="SKA53_02606" CDS complement(498952..500004) /locus_tag="SKA53_02606" /EC_number="3.5.2.3" /note="COG0418 Dihydroorotase" /codon_start=1 /transl_table=11 /product="dihydroorotase" /db_xref="CDD:10292" /translation="MPDKNLTSLTIRRPDDWHLHLRDGAMLRAVLPETARDFARAIVM PNLVPPVVTGAQAAAYRDRIMAALPEGMDFTPLMTLYLTEATDPADVRAAHAAGIATA VKLYPAGATTNSASGVRDFEKVRPVLEAMAEIGMPLCVHGEVTNHDIDIFDREAVFID KILKPLRKKVPDLKVVMEHVTTQDAVDYVRDNPKNLAATITTHHLIINRNHILAGGIK PHFYCLPVAKRETHRIALVQAAVSGDKRFFLGTDSAPHTDDAKLQSCGCAGIFTATNT MSCLAEVFDVAGALRKLEAFTSLNGPMFYGLPPNEATITLTKGDPVPYPDRIETGDGP VTLFNPGFDLHWRVTG" gene complement(500056..501279) /locus_tag="SKA53_02611" CDS complement(500056..501279) /locus_tag="SKA53_02611" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="putative acyl-CoA dehydrogenase" /db_xref="CDD:27626" /translation="MTHNAAITATGFGPDLGPFDWADPLRLEDQLSEDERMLRDAARQ FAQDKLQPRVTAAYRDALVAPEIFTLMGEAGLLGLTIPEEYGGLGAGYVTYGLVAREI ERVDSGYRSMMSVQSSLVMYPIHAYGSDAQREKYLPGLAAGTLIGCFGLTEPDAGSDP AGMKTTAKKTAGGYVLNGSKMWISNAPIADVFVVWAKSEAHGGKIRGFVLDKGMKGLS APKVGGKLSLRASVTGEIVMDNVEVGEDALLPGVQGLKGPFGCLNRARYGIAWGVMGA AEACWHAARQYGLDRKQFGKPLAQTQLFQKKLADMQTEIALGTQAALQLGRLMETGRA APEMISLMKRNNCGKALDIARASRDMHGGNGISEDFQIMRHMVNLETVNTYEGTHDVH ALILGRAQTGLQAFF" gene 501389..502291 /locus_tag="SKA53_02616" CDS 501389..502291 /locus_tag="SKA53_02616" /note="COG0714 MoxR-like ATPases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10583" /translation="MAFDTIDAAQAALGDQGYICGRPLATVVFLALRLGRPLFLEGEA GTGKTEIAKALAAALGRRLIRLQCYEGLDASSAVYEWNFAEQMIAIRTAEATGGADRS TLKSELFTEDYLIERPLLQAMRPQPGGAPILLIDELDRTDAPFEAFLLEALSDFQVTI PELGTIKAAEPPIVILTSNRTREVHDALKRRCLYHWVDYPDFDREIAILHARAPEASA ALSAEVVAFVQRLRDEDLYKKPGVAETIDWAKCLLALDVVNLSPEVISDTLGALLKYQ DDIQKLQNAQAKRILDDARASLSP" gene 502351..503613 /locus_tag="SKA53_02621" CDS 502351..503613 /locus_tag="SKA53_02621" /note="COG3552 Protein containing von Willebrand factor type A (vWA) domain" /codon_start=1 /transl_table=11 /product="VWA domain containing CoxE-like family protein" /db_xref="CDD:12879" /translation="MKSPAYAPLALPDDPKLAGNITHFARALRKAGVKLGPGRVIEAI NAVQAVGFTERADFFWTLHACFVSKPEDSAIFAQLFRLYWRDPQYMEQMMSLLTPMVH GVQQDRVAEAAEKRAAQALLDGREPPAPEAQAREDEIEIDIDASQTASAEERLRQLDF EQMSTAEMAAATRMLAGLRLPVPPILTRRRQALPGPLADWQRTMRRAARQGGEIGKLA TARKRMRYPNLVVLCDISGSMSSYSRAVLHFVHAVANREGQGWAQVHAFTFGTRLTNI TRHMRRRDVDAALAAAGAQAQDWEGGTRIGACLHDFNRDWARRVAGQGAVVLLITDGL DRDATHDLGREMERMQLTFSQLIWLNPLLRWDGFAPLARGIAQMLPYCTSFRAAHNVA SLAGLAAALTRPDDGGEKRRMLAALHGS" gene 503610..504611 /locus_tag="SKA53_02626" CDS 503610..504611 /locus_tag="SKA53_02626" /note="COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family" /codon_start=1 /transl_table=11 /product="XdhC/CoxI family protein" /db_xref="CDD:11683" /translation="MTHATGGLSKGKTMTNDPAALALHWAQTGRKVALATVIATWGSA PRGVGSQLVIDADGAMEGSVSGGCVEGAVVLAAMDAITAGQHAILEFGVSDDAAFAVG LACGGQIKVLVQPVGDGLTIKTLQALAEARATARPIGLTTDLATGISRVITAADAPER FRLDRAGLDDDGTFITIQNPPLRMIIVGAVHIAQPLVGMARACGYAPVLIDPRGAFGS DARFPGETILEDWPDEALAALKPDARTAIVTLTHDPKLDDPAIMAALRSDVFYLGCLG STRTHAKRVARLQAAGFTDADIARIHAPVGLDIGGRQPAEIALSIMAQITQTLRHAR" gene 504608..505588 /locus_tag="SKA53_02631" CDS 504608..505588 /locus_tag="SKA53_02631" /note="COG0303 Molybdopterin biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein" /db_xref="CDD:10177" /translation="MKFGPVPVADALGAILAHAVPAGATLLRKGKLLEPADIAALQGA GVRQVTVAMLDPGDLDENAAAAKLARALVGAHVTVSAAATGRVNLFAQVAGILSLDAA AIGRFNALNPMITLATLPLHSRVAAGNMIATIKIISYAVPEADVDRAADMAAALAVLP PVYHRATLIETRLGEPQPIKGRTALAKRLARFDIALDERCIVSHEINDLAAALDAASG EVIFILTASATSDIDDVGPAALRAAGGKVSQFGMPVDPGNLLFLGDLRGKPVIGLPGC ARSPALNGADWVLERVVCGRMPTPADIAAMGVGGLLKEIPDRPQPRRQIG" gene 505677..506162 /locus_tag="SKA53_02636" CDS 505677..506162 /locus_tag="SKA53_02636" /note="COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /codon_start=1 /transl_table=11 /product="carbon-monoxide dehydrogenase, small subunit" /db_xref="CDD:11788" /translation="MASVAMVVNGKSITREVEGHTLLVDFLRDDLRLTGTHVGCDTSQ CGACVVHVNGQSVKACAMFAIEADGADVATIEGQANKDGSLNVIQQAFQDHHGLQCGF CTPGMVMTAAALLKENPKPTEAEVRSYLEGNICRCTGYHNIVKAIMAASGQDVTAIAA E" gene 506225..508594 /locus_tag="SKA53_02641" CDS 506225..508594 /locus_tag="SKA53_02641" /note="COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /codon_start=1 /transl_table=11 /product="Putative carbon monoxide dehydrogenase large chain" /db_xref="CDD:11243" /translation="MPKDTGIGASDKRREDIRFLTGAGHYTDDIKHYGATTAIFCRST VANGIIKSIDTSAAEAMPGVLAIFTGADFADVGGNPAGWLINSRDGTPMKEPKRPVLA HGKVRHVGDAYAAVIAETELQARNAAEAIVAEIEELPAIVDMAAALAGDAFVHDEIGT NQCFDWGWIEDNRAATDAAIKAAPHVTTLELVNNRLVPNAMEPRCSIGSYDAGNDSYI LQTTSQNPHLTRLLISAFVMGIPENKLTVIAPDVGGGFGSKIYHYGEEALVLAAARKI GRPVKWTADRTEAFLTDAHGRDHVTKIELACEKDGTFIAFRTETMANVGAYLSNFSTA TPTFLHGTLMAGNYTVPNVYVNVKAVFTNTAPVDAYRGAGRPEATYSIERVIDKAARE LGIDPIAIRRKNFVKPDQYPFTSAAGLEYDSGNYDALMDTLEKHIDRDGFAVRRKASE ARGMLRGLGLNAYIEACGIAPSNLVGVLGSRVGLYDAATVRVNATGNLSVMVGAHSHG QGHETVFPQIVGEMLGIDPASIDIVHGDTSKIPFGMGTYGSRSLAVCGSAMVRATEKI IAKAKKIAAHMLEASADDVDFKDGQFTVKGTDKSVSFGEVALKAYIPHNFPIEDIEPG LEETAFYDPANFTYPSGAYACEVEVDPDTGKVRVDRFVAVDDFGNIMNPMIVTGQVHG GLGQGIGQALLEGARYDDDGQLLSASYMDYTMPRADDLPFYTVDHANGTPCTHNPLGV KGCGEAGAIGSPPTIVNAVVDALQSAGKNVTHIDMPLTPLRVWDAMQNA" gene 508607..509398 /locus_tag="SKA53_02646" CDS 508607..509398 /locus_tag="SKA53_02646" /note="COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs" /codon_start=1 /transl_table=11 /product="putative carbon monoxide dehydrogenase medium chain" /db_xref="CDD:13774" /translation="MYAFEIERPGTIADAVKALQSDGAQALGGGQTLIPTLKARLAAP DVLVSLSAIGEMQGVCLSDDGALCIGAATTHATVARDAAAHFAGLAHLASHIGDPAVR NRGTIGGSLANNDPAACYPAAVLGTGAVIITNTRQIAADDYFQGMFTTALDEGEVITE VRFPIPQKSHYMKFVQPASRFALVGVFVAKYADGVRVAVTGASEEGVFRWHEAEAALS ADFSPKALDALSVDADGMIGDLHGTPAYRAHLVKVMTGRAVTAAT" gene complement(509624..510034) /locus_tag="SKA53_02651" CDS complement(509624..510034) /locus_tag="SKA53_02651" /note="COG0290 Translation initiation factor 3 (IF-3)" /codon_start=1 /transl_table=11 /product="translation initiation factor" /db_xref="CDD:10164" /translation="MQMAEEAGLDLVEISPNAVPPVCKIMDFGKFKYETQKKEAEARK KQKIIEIKEIKFRPNTDSHDYEVKMRSVFKFLENGDKVKITLRFRGREMAHQELGRQL LERVAEDTKETGKVENFPKMEGRQMVMLIGPLSK" gene complement(510474..511340) /locus_tag="SKA53_02656" CDS complement(510474..511340) /locus_tag="SKA53_02656" /note="COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1" /codon_start=1 /transl_table=11 /product="ferredoxin--NADP reductase" /db_xref="CDD:10746" /translation="MGHDEHMTEQSPVNHASAKIVPQLPDMQTVTEVKHYTDRLFSFR VTRPASLRFRSGEFVMIGLMGDEDPETGKRKPIMRAYSIASPSWDEELEFYSIKVQDG PLTSKLQHIQPGDGLILRPKPVGTLVHDALLPGKRLWFFATGTGFAPFASLLREPQTY EDYDEIIITHTCRELGELTYGRDLIEGLKTDELLNEVIGDGFWKKIKYYPTTTREDSP KMGRITDLMRSGEAFSDLGVPVLSPGTDRAMICGNLAFNLELKEMLESYGLNEGANSN PQQYVVEKAFLD" gene complement(511387..511797) /locus_tag="SKA53_02661" CDS complement(511387..511797) /locus_tag="SKA53_02661" /note="COG3749 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24946" /translation="MSIIVTDTGFAADDWTGPFRDAAQTIANDCAYAVDIASDTDPAT LARLTNAPMIRIDFPSFADGRGFTLAAMLRRAGYQGRLRARGHVIADQYAMARRAGFD EVEIDDTMAARQPQSQWLARADWQQNHYQARLRS" gene complement(511794..512513) /locus_tag="SKA53_02666" CDS complement(511794..512513) /locus_tag="SKA53_02666" /EC_number="1.8.4.8" /note="COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes" /codon_start=1 /transl_table=11 /product="phosphoadenosine phosphosulfate reductase" /db_xref="CDD:10050" /translation="MPLDDLADHRNALHRDSDALAVLRAALNDTQIGPVALVSSFGAE SVVLLHLAAQIDTAVPVIFLDTEMLFPESLAYQRDVAKALGLSDVRIITPDRNAILRE DVDGLLHQADTDACCDLRKARPLEQALQGFGGWITGRKQFQNGQRASLPLFEPDGARI KINPLAHWSSDDLRAYMTDHSLPRHPLVAQGYPSIGCMPCTTRVGAGEDPRAGRWRGS EKTECGIHFENGRMVREGKAA" gene complement(512503..514203) /locus_tag="SKA53_02671" CDS complement(512503..514203) /locus_tag="SKA53_02671" /note="COG0155 Sulfite reductase, beta subunit (hemoprotein)" /codon_start=1 /transl_table=11 /product="Sulfite/nitrite reductase hemoprotein subunit" /db_xref="CDD:10030" /translation="MIRDGDRTKQMYVYNDFDETFVRTRVAQFRGQVERRIDGSLTED EFKPLRLMNGLYLQLHAYMLRVAVPYGTLNPAQMRQLAMIADRWDKGYGHFTTRQNIQ YNWPKLGDVPDMLEALADVGMHAIQTSGNTIRNVTADHFAGAAADEIEDPRAIAELLR QWSTDHPEFQFLPRKFKIAVTGAAADRAVTRAHDIGLVVVRNDAGEVGYQVIVGGGLG RTPMVGKVLRDFVSKADLLPYVEAIVSVYNLLGRRDNKYKARIKITLHENGIETIRDL VEDRFNAIRAGFGGYDQTLLAEIEKSFAPPAFVTKATDGYEAARLANPAFRSWTDTNL SAHKAAGYAIVSISIKKHGATPGDATSDQMRVMAELADRYGHGELRISHEQNVILPHV HQSDLPAVYAALRKADLATANIGLASDIIACPGMDYCALATARSIPIAQQIATRFDEL KIEHDVGPLKIKISGCINACGHHHVGHIGILGLDRAGVENYQITLGGDGSEMTTIGER AGPGFSADDIVPAIERLVTGYLDLRRDPSETFLQTYRRLGLAPFKTLLYPSEDKADAA " gene complement(514200..514511) /locus_tag="SKA53_02676" CDS complement(514200..514511) /locus_tag="SKA53_02676" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPPRFTPKVVTANALLDGDAVWLTEDDHWSPLMSRAELITDEAH ADLRLLQAKARASEIAGAYLADARLGADGPEPVHFREAFRTRGPSNYPHGKQVETPPQ T" gene complement(514511..515902) /locus_tag="SKA53_02681" CDS complement(514511..515902) /locus_tag="SKA53_02681" /note="COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)" /codon_start=1 /transl_table=11 /product="siroheme synthetase [Rhizobium leguminosarum" /db_xref="CDD:9883" /translation="MQHFPIFLAVAGRRIVLSGGGDAAMAKLRLLMKTTAHLTVIAPD VTPEISAWAAAGKLRIINRAMEPGDTLCAALFYAANEDDAEDARVAAIAHADGALVNI VDNLADSQFITPAIVDRDPVVVAIGTEGAAPVLARAIKADIEERLPVSLGVLARIGKT FRHAVDVLPMGRKRRDFWADFYFQHGPKAMGTAGEAGIIPALETLLDNHITARSKAGH VDLVGAGPGDPELLTLKARNALDKADVVIHDNLVTAEILELARREAIIIDAGKQGFGR AMPQDQINALIVQHALDGHHVVRLKAGDPTVFGRLDEEISAIIDAGVSYTIVPGITAA SAAVAGIGQSLTQRGRNSAVRFITGHDTRGYADHDWRALAAPGEVAAIYMGKRAARFI QGRLLMHGADPATPVTIIENASRANQRVIATCLVELEPTLTRAALTGPVITFYGLAPR DAAAAAIKIKEFA" gene 515982..516500 /locus_tag="SKA53_02686" CDS 515982..516500 /locus_tag="SKA53_02686" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family" /db_xref="CDD:1588" /translation="MFQVAPKTDHASLNDRKTGMALRIDATDRKILAALQADAAQSLD DIAKTVGSSKTPVWNRIRKLREAGVIGQQTVILDAEKLGFEACFFVLIRTSEHDKDWQ ARFLAALKSRPEVQEAHRLAGDIDYILKVRVKNARAYDTFYQALISEVKVHNVTALLS MEEIKSTVALPL" gene complement(516578..517795) /locus_tag="SKA53_02691" CDS complement(516578..517795) /locus_tag="SKA53_02691" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="Cytochrome P450 hydroxylase" /db_xref="CDD:11832" /translation="MCSAPIAKIAAARQSCAMQHLTQSPTDPAFVQNPYPFYDRARQT GDFFWWDDYAMPCAVSHKAVHAVLRDRRMGRECPPELARAIPDALRPFYDIEAHSMLE LEPPRHTRLRALVLRAFTSRTIAALAPQITQLCHDLIDRFPDEPFDLLTAYAQPVPVI TIARLLGVPEDRADDLLAWSNAMVAMYQARRTPEIEAAAITASTDFSDFMRGYVATRR KTPADDLISTLIAAEEQGEKLTTEELITTCILLLNAGHEATVHTLGNGTKTLLEHNIR GITDACVEEVIRHDPPLHMFTRWVYEDVQIGDQRFKRGDQIACLLGAANRDPAVYPDP ARFDPTRSGPQNTSFGGGIHFCVGAPLARLELKIALDVLFTRCPDLRLTAPPSYGDVY HFHGLTGLMVATR" gene 517923..518759 /locus_tag="SKA53_02696" CDS 517923..518759 /locus_tag="SKA53_02696" /note="COG5012 Predicted cobalamin binding protein" /codon_start=1 /transl_table=11 /product="Coenzyme B12-binding" /translation="MFMAKTSLDDGVFDRSAYQNAKRQLRLVETELPQNAVSSLAREV VRRLAFRMPRHENAADLPTQSEIDLLCAALLSADDTAADQFILAARRDGVDVGAISRG YVAGAARKLGQMWDDDRISFIDVTLACGKLYGIIRGLRHVLAPQIIQGRETRPALFAL VPGETHTLGIEIATDHFRRDGWDVDMLMGLDHDAMVSEADLRHYEAIVLVANSDRMLE PLTRLSLALRITQPLAHIIVAGGILDHHPDILHLVGAEAVMADLDTAIATLRDVLGPA KT" gene complement(518756..519484) /locus_tag="SKA53_02701" CDS complement(518756..519484) /locus_tag="SKA53_02701" /note="COG0149 Triosephosphate isomerase" /codon_start=1 /transl_table=11 /product="Triosephosphate isomerase" /db_xref="CDD:10024" /translation="MRRKLAAGNWKMNGLRADLTQLATLAEQRGYDVDVLICLPATLI GSCAGLPIAIGAQDCHTATHGAHTGDISAAMLADVGATHVITGHSERRTDHHETDAIV AAKSRAAHDAGLITIICIGETLVQREAGTTLDVIDAQLAGSVPDCATADNTVIAYEPI WAIGTGKVPTTDQIAQVHAHIHARLTARFADGAGFGILYGGSVKGDNAAAIFAVPHVT GALVGGASLKAVDFTPIIAALAAS" gene complement(519505..519867) /locus_tag="SKA53_02706" CDS complement(519505..519867) /locus_tag="SKA53_02706" /note="COG0316 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster assembly accessory protein" /db_xref="CDD:10190" /translation="MFGIPGKQAVTITEKAATQIARLMAKDGHQGLRIGVKKGGCAGM EYTMAYVTDIDPLDEVVEQQGARVMIAPMAQMFLFGTEIDYETSLLESGFKFRNPNVV DACGCGESIKFAENIASR" gene complement(519943..521148) /locus_tag="SKA53_02711" CDS complement(519943..521148) /locus_tag="SKA53_02711" /note="COG0584 Glycerophosphoryl diester phosphodiesterase" /codon_start=1 /transl_table=11 /product="Glycerophosphoryl diester phosphodiesterase" /db_xref="CDD:26006" /translation="MTRLSLTLLATLAGTTAIAETALTYGPRPAYLVSQMTDSPLKEQ LLACADQTPMRSDFSIGHRGAPLMFPEHTVESNVAAAQMGAGILECDVTFTADLELVC RHAQNDLHTTTNILVTPLADKCTAGFSPANGDTRASAECRTSDLTLAEFQTLDPKMDA ANTAATTAADYLNGTANWRTDLYATNATLMTHAESIALFRDLGAKFTPELKSPSVEMP FNGFSQEDYAQKLVDEYKAAGIPASDVWLQSFNLDDVLYWIKNEPAFGAQAVYLMDEY ETVDGYTPHDPATWPNTMEELKAMGVNIIAPPTWMLVTLQDGKIVPSALATAAKAADL QIITWTLERSGPLHTGGGWYFQGVNDAITNDGAYFEVLDVLAQDVGVIGVFSDWPATT TYYANCMGL" gene complement(521234..521596) /locus_tag="SKA53_02716" CDS complement(521234..521596) /locus_tag="SKA53_02716" /note="COG2151 Predicted metal-sulfur cluster biosynthetic enzyme" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:17065" /translation="MIDANAQLEGAPLIAPSTTDHPLYDDVVQACRSVYDPEIPVNIY DLGLIYTIDIKDDNAVNIVMTLTAPGCPVAGEMPGWVADAIEPLPGVKQVDVEMTFEP QWGMDMMSDEARLELGFM" gene 521727..522857 /locus_tag="SKA53_02721" CDS 521727..522857 /locus_tag="SKA53_02721" /note="COG0343 Queuine/archaeosine tRNA-ribosyltransferase" /codon_start=1 /transl_table=11 /product="queuine tRNA-ribosyltransferase" /db_xref="CDD:10217" /translation="MTQRFSFDLHATDGKARTGAISTPRGVIRTPAFMPVGTAATVKA MLPESVAATGADILLGNTYHLMLRPTAERIARLGGLHKFMNWDKPILTDSGGFQVMSL AGLRKLTEEGVTFKSHIDGSRHHLSPERSMEIQALLGSDIVMCFDECPALPADRDRIK SSMDLSMRWAQRSRDAFGDRPGHALFGIQQGGLEQDLREESAQALQAIGFDGYAVGGL AVGEGQEAMFGVLDYAPDQLPVDKPRYLMGVGKPDDIVGAVKRGIDMMDCVLPSRSGR TGQAFTRHGVVNIKNARHQDDPRPLDEACTCPACRGYSRAYLHHVFRANEMISGMLLT WHNLHYFQQIMAGMRDAISAGTFAAWEADFHALRAQGDIDPL" gene 522972..525380 /locus_tag="SKA53_02726" CDS 522972..525380 /locus_tag="SKA53_02726" /note="COG0466 ATP-dependent Lon protease, bacterial type" /codon_start=1 /transl_table=11 /product="Probable ATP-dependent protease La protein" /db_xref="CDD:10339" /translation="MQEPLSSSYPVLPLRDIVVFPHMIVPLFVGRDKSVRALEEVMQD DKQILLSSQIDPGQDDPDQDGIYKSGVLANVLQLLKLPDGTVKVLVEGRSRVRITGFL PNDSFFEASAEYLTEESGDPTEVEALVRNVAAEFERYAKVKKNIPEEAMAAVSDATEP AKLADLVAGHLGIEVAQKQGLLETLSVAERLEKVYGMMQGEMSVLQVERKIKTRVKSQ MERTQREYYLNEQMKAIQKELGDGEDGQNEVAELEARIHDTKLSKEAREKVDAELKKL KSMSPMSAEATVVRNYMDWILGLPWNVKSRTKKDLHKAQAVLDADHYGLEKVKERIVE YLAVQQRSAKLKGPIMCLVGPPGVGKTSLGKSVAKATGREFIRISLGGVRDESEIRGH RRTYIGSMPGKIIQALKKAKTTNPLILLDEIDKMGNDFRGDPASAMLEVLDPEQNATF VDHYLEVEYDLSNVMFLTTANSYNMPGPLLDRMEIITLSGYTEDEKVEIAKQHLLPKV MQNHGLKAREFSVSDDALLAMVRVYTREAGVRNLERELAKLARKAVTRIVKKEAEAIT ITAANLTDFLGVEKHRFGLAEEKDQIGVVTGLAWTSVGGELLNIEALRLPGKGRMKTT GKLGDVMKESIDAASSYVRSIAPEIGVKPPKFDTIDIHVHVPDGATPKDGPSAGLAMV TSIVSVLTQIPVRRDIAMTGEVSLRGNAMPIGGLKEKLLAALRGGITTVLIPQDNAKD LPDIPDNVKEGLTIIPVTHVSQVLEHALVRKPEPIEWDEAAEEAAAAAAIKSGTAPEA ARTH" gene 525411..525818 /locus_tag="SKA53_02731" CDS 525411..525818 /locus_tag="SKA53_02731" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQKARLSPAKALAPRAKPAKLPLIATGQTMARADSSASETAAPM PLKKPDLLDQLATRSGLKKRDAKLALDATLALIGEALARGDDLLLPPLGRVRVVKAKD LGAGAQLLTLKLRSGKDASQSGKTGLATAVEDV" gene 525832..525903 /locus_tag="SKA53_t03227" tRNA 525832..525903 /locus_tag="SKA53_t03227" /product="tRNA-Val" gene 525969..526532 /locus_tag="SKA53_02736" CDS 525969..526532 /locus_tag="SKA53_02736" /note="COG0406 Fructose-2,6-bisphosphatase" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /db_xref="CDD:16692" /translation="MTFPEIYILRHGQTEWNAENRMQGALNSPLTAQGAADAARQGAI LAQRDLTGFQFWCSPQGRAVQTAGIALARIAAHIHTDHRLREIGVGDWAGLLRDTLPM PDGPDPVAAQYAMAPNGEGFAALETRCRSFLADLNAPAVLVTHGITSRVLRRILAGDA AIAVSTAHGGQGRVYHIKDGIQHLLEA" gene 526647..526719 /locus_tag="SKA53_t03229" tRNA 526647..526719 /locus_tag="SKA53_t03229" /product="tRNA-Val" gene 526813..526920 /locus_tag="SKA53_02741" CDS 526813..526920 /locus_tag="SKA53_02741" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSPVAVGSVAPPILVNQKLMAARGMMDLVNLCGGR" gene 527188..527261 /locus_tag="SKA53_t03231" tRNA 527188..527261 /locus_tag="SKA53_t03231" /product="tRNA-Asp" gene 527374..527447 /locus_tag="SKA53_t03233" tRNA 527374..527447 /locus_tag="SKA53_t03233" /product="tRNA-Asp" gene complement(527492..528871) /locus_tag="SKA53_02746" CDS complement(527492..528871) /locus_tag="SKA53_02746" /note="COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /codon_start=1 /transl_table=11 /product="ArgE/DapE/Acy1 family protein" /db_xref="CDD:10494" /translation="MSLDPVLDRIDADLPQAVERLKELLRIPSISTDPAYKADCDMAA DWLVADLVAMGFAASKRPTPGHPMVVAHAAGDGPHVLFYGHYDVQPVDPLHLWNRDPF DPQVEDTPKGKVIRGRGTSDDKGQLMTFVEACRAWIAVHGSLPAKMTLFFEGEEESGS PSLVPFMQDNAKELTADIALICDTGLYGDSTPAIITQLRGLLGEEITITGPDKDLHSG MYGGLAMNPARVLARVIAALHDEDGRITVPGFYDGVPDLSNELAAAWDDLRFDEAAFL GDVGLSIPAGEKGRRPLEMIWSRPTCEVNGMWSGYTGDGFKTVLPSQAHAKISFRLVG TQDPLAIRAAFRKMVQDMIPADCSVTFAAHGASAAGQMTTTHPAFAQARRALSDEWPQ AAAYVGSGGSIPIAAYFKQILDMDAMLIGFGKNDDQIHSPNEKYDLSSFHKGIRSWAR ILHAMTQTA" gene 529144..530370 /locus_tag="SKA53_02751" CDS 529144..530370 /locus_tag="SKA53_02751" /EC_number="2.3.1.37" /note="COG0156 7-keto-8-aminopelargonate synthetase and related enzymes" /codon_start=1 /transl_table=11 /product="5-aminolevulinate synthase" /db_xref="CDD:10031" /translation="MVDYNAQLDTAINRLHDEGRYRTFIDIERKRGQFPHATWVKPDG SEMPVTVWCGNDYLGMGQHPVVLAAMHEAIEATGAGSGGTRNISGTTVYHKRLEAELA DLHGKGAALLFTSAYIANDATLSTLPKLFPGLIIYSDMLNHASMIEGVRRNGGAKRIF RHNDVAHLRELLAADDPAAPKLIAFESIYSMDGDFGPIAAFCDLAEEFGALTYCDEVH AVGMYGPRGAGVAERDGVMHRIDIINGTLAKAYGVMGGYIAASPKMCDAVRSYAPGFI FTTSLPPAVAAAAAASVAHLKKDQALRDSHQMQAKILKLRLKGLGLPIIDHGSHIVPL IVGDPKHTKKLSDMLLSEFGIYVQPINFPTVPRGTERLRFTPSPVHGSREMTALVGAL DGLWSHCALNRAELAG" gene 530486..531691 /locus_tag="SKA53_02756" CDS 530486..531691 /locus_tag="SKA53_02756" /note="COG1426 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11140" /translation="MGKTFRRASVAQDVQTRGFDDYALRLGDIMRGERATLGKSLLDI QRELKIKAAYIAAIENADPSAFDTPGFIAGYVRSYARYLGMDPDAAFATFCKESGFAT AHGMSEQASSLKNRVADTSRVSAGKDIFLSSRTPFVPARESVFAQLELRAIGSVLVLI TMIAGLGYGGWTVLQEVQRVQFAPVEQAPVVVSELDPLAGGGNGFNVPGDALADVTLP SPDALDRLYRPQALDVPVMVARDTPIATLTPRMIGALASGQDDSAVAMVAADLPIAQP DTLPTPSIQVVEPPAPQVQLVAARPAWVRVQAADGVVLFEGIMEPGQNFVLPATEDPA ILRVGESGAMYFAVNGQHYGPVGQRGVVTSNVVLSVDNLTASYALADLASDADLAEII RVAEAVTDQ" gene 531761..532888 /locus_tag="SKA53_02761" CDS 531761..532888 /locus_tag="SKA53_02761" /EC_number="1.17.4.3" /note="COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase" /db_xref="CDD:26268" /translation="MMSLNHIRPWRNIYRRKSRQIMVGNVPVGGDAPISVQTMTNTLT TDIKGTIAQVQAAADAGADIVRISVPDEASSKALREIVRNVSVPIVADIHFHYKRGIE AAEAGAACLRINPGNIGDEKRVKEVIRAARDNNCSIRIGVNAGSLEKHLLDKYGEPCP DAMVESGLDHIKILQDNDFHEFKISCKASDVFMAAAAYQQLADATDAPIHLGITEAGG LISGTVKSAIGMGNLLWMGIGDTIRVSLSADPVEEVKMGFEILKSLGLRHRGVNIISC PSCARQGFDVIKTVEALEKRLEHIKTPMSLSIIGCVVNGPGEALMTDVGFTGGGAGSG MVYLAGKQSHKQSNADMIEHIVEQVEKKAAEIEAKGDLAAE" gene 532934..534079 /locus_tag="SKA53_02766" CDS 532934..534079 /locus_tag="SKA53_02766" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aminotransferase, classes I and II" /db_xref="CDD:10310" /translation="MRHATRGDVDPFIVMDVMEAARQAEAAGRHIIHMEVGQPGTGAP KAACDQLIADMANPLGYTVGLGLPDLRARIARHYGDWYGLDLDPARVVITSGASGAFL LAFSALFDNGERVGLGTPCYPSYRQILRAVGLTPVDIPTSLVDRFQPQPQHVAAHDLA GLIVASPANPTGTMLDAPQLAALAEACAARDAALISDEIYHGIDYDLRPVSALSVTDE VYVINSFSKYFSMTGWRVGWMVVPDDHVRRIERLAQNMFICAPHAAQRLALHAMNCAP ELDANKAVYAANRALMMDGLRAAGLGAFAPPDGAFYIYVDVSAYTDDARAFAAEILDQ AGVAVTPGLDFDAARGHHWLRFSYARGTADIIEGLDRIARFMQARRA" gene 534076..535236 /locus_tag="SKA53_02771" CDS 534076..535236 /locus_tag="SKA53_02771" /note="COG0860 N-acetylmuramoyl-L-alanine amidase" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase, family 3" /db_xref="CDD:10726" /translation="MIRWIVLCCLLATSAGAQARFDPERSDIRDGWRSVQIVLGLSDI VPYRIFTLDDPRRLVLDFQGLDTGGASASPINSARRVTDIRFGPYRPGWTRMVLDLSE PLTLAKAEMTRDAQGAQLTLRLARTTADDFAAAAGAPPDPGWDALSEAALRGLEQRQS GAFIVVLDPGHGGVDPGAERNGITEAHLMLEFAAEIAGQLRAQDGVAVVMTREADVFV PLFTRMSIARRARADLFISLHADALEHDDAWGASVYTLSEDSDDIAMELLVERHERGD LLAGVDLSVTDDRVTGVLMDLARQTTSPRAASFADHVIAQMQAQGVRLNAKPRRTGRF SVLLAADFPSVLIEAGFLSNTQDRQTLTDPQSRARLVAAITQAVAQYRSDMP" gene 535299..537878 /locus_tag="SKA53_02776" CDS 535299..537878 /locus_tag="SKA53_02776" /note="COG5009 Membrane carboxypeptidase/penicillin-binding protein" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 1A" /db_xref="CDD:14139" /translation="MTPTQAARISTRNPERNDRPVLRFIFSFFGGIFTFLTMGLVMAA LGLGGVIFLYGRDLPSYETLSQYTPKTISRIYSREGRIIDEFAVERRLFTPAEDIPDL VKQAFISAEDKNFYTHQGFDATSMLSAVIDAVQSRGEDLRGASTITQQVMKNFLLDGS RSVERKIKEIILAVRIEQAMSKERILELYLNEIFLGQNSFGVTAAALTYFNKPLTDLT AGEAAYLASLPKSPSNRHPVRDQEAAIFWRDNTLRLMHQNGYIDDITLAVETGSPLRT VQGGDYADFRTTLPDRDYFTDEIRRQLSQDFGQEEFFSGGLSIRATVDPELQKVAAQS LQQALEDFDRARGVWRGTGLTIAPEALADEAAWRAALRATDLPRDVMLGGQWHPAVVL AVAENSLRIGIEGLPASEAEPHVVPRRDIEWMRGNFFDNFTPGDVVHVRRIVQDSDGS FLRWSLRQVPEVQGAFMAMDVNTGRVIAMQGGFSYQASVFNRATQAQRQPGSSFKPFV YATALDSGYSPATIVVDAPIEIMTPQGLWRPTNASNQFYGPTPLRTGIERSRNLMTVR LAQEVGIDRIAEYAERFGVYDRMNPVLAASLGSDETTLFKMVAAYAMFANGGERVAPT LVDRVQDRFGNTVYLHDDRQCPDCANLTLPAGQAPLILSNRTRVMNEVTAYQLTSMMQ GVVERGTAAGSVNLPAQIAGKTGTTNDSKDVWFVGFSSNIVAGCYIGYDNPRSLGSGA SGGGMCGPVFNRFMTEAIDVFGAPPFRVPDQCQFIKIDRFSGARLPDDALGDNVVAEC FRAGEEPVFGIMYDGGFAMAADLPLYDEVPRSQREVTTSTGDTATVGERATFGTLSTG GLY" gene 537942..539066 /locus_tag="SKA53_02781" CDS 537942..539066 /locus_tag="SKA53_02781" /note="COG1186 Protein chain release factor B" /codon_start=1 /transl_table=11 /product="peptide chain release factor 2" /db_xref="CDD:10904" /translation="MRAETQNNVDAIQKSLNLLAQRMDYETARYRLEEFDARVEDPTL WDDPDAAQKLMRDRQVLVDTLTMHDTIKQELADNIELIEMGEMEGDADIITEAEEALK SLREKAAQKELEALLDGEADANDTFLEVNAGAGGTESCDWANMLSRMYVRWAEKKGYK VELQSMQSGDEAGIKSVTYKIMGHNAYGWLKSESGVHRLVRISPFDSAAKRHTSFTSV KVYPVVDDNIEIEVNPSDIRLDTYRSSGAGGQHVNTTDSAVRITHFPTGIVVTSSEKS QHQNRDIAMKALKSRLYQMELDKRSALVNEAHENAGDAGWGNQIRSYVLQPYQMVKDL RTGFETSDTKGVLDGDLDGLMGATLALDMSGKGRDAANAD" gene 539112..539915 /locus_tag="SKA53_02786" CDS 539112..539915 /locus_tag="SKA53_02786" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14557" /translation="MTQTGMISHSATPQVRDLALADLRAALLAGIKDFRRTPQFGLFF SAVYVLGGFGMLSLGAGHVTWTLATSLGFPLIAPFAAAGLYEVSRRIETGQPLSWRAV LAIVWQERTRQLPWLGAIIVIYFLFWTFLAHMIFALFMGLSTMTNVSQSWEVFLTPTG LTMIAVELAVGAVLAFLLFALTVVSLPLVLEREVDFVTAMLISLAVVRQNPSVMLCWA GLIAALTLLALLPWFVGLIVVLPVLGHATWHLYRRALDFDEKGRHKGRP" gene complement(539940..540440) /locus_tag="SKA53_02791" CDS complement(539940..540440) /locus_tag="SKA53_02791" /note="COG1664 Integral membrane protein CcmA involved in cell shape determination" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15816" /translation="MFSKSKINEPGPKVADSPAATTVDASKTGSPVPDFKTSPPKAKP PASMLSSDLLITGNLKTTGDIQIEGQVDGDIRAHLLTVGESATVKGEIIADDVVVNGR VIGRVRGLKVRLTSTARVEGDIIHKTIAIESGAHFEGSVQRQDDPLSSGGQKMPVLPT AEGDKA" gene complement(540430..541722) /locus_tag="SKA53_02796" CDS complement(540430..541722) /locus_tag="SKA53_02796" /note="COG0739 Membrane proteins related to metalloendopeptidases" /codon_start=1 /transl_table=11 /product="peptidase, M23/M37 family" /db_xref="CDD:10607" /translation="MKPIHATLERWFPEKRLFLRSDTETRFIRLSSETQLVAWAGSTI VVGWTIVATAILLMDSIGAGNFRAQAQRDQMTYEQRLNILSSDRDNRAAEAASAHARF EMALEQISIMQSELLATEEKRRELETGLEVVQTTLRTTMKAREEARQQVAMLTATGDD GTPLSMPDEAVGTVNLLASALAETAAERDQIADDAGMAIEQAAEMQLELRLLQERNDQ IFRQLEEAMLVSVEPLDNVFRAAGMNPDTLIEQVRRGYSGTGGPLAPIEFTAATGEPD PDSLRANAILASMDRINLYRIAADKLPIAMPVRSNYRLTSGFGQRWGRLHAGTDFAGP VGTPIHAAADGVVVKAGWESSYGRLITIRHDFGLETRYAHLNTIDVRVGQRVSRGDRI GAMGNSGRSTGPHLHYEVRVNGNPVNPMTYIRAGQNVF" gene complement(541948..542415) /locus_tag="SKA53_02801" CDS complement(541948..542415) /locus_tag="SKA53_02801" /note="COG1225 Peroxiredoxin" /codon_start=1 /transl_table=11 /product="AhpC/TSA family protein" /db_xref="CDD:10943" /translation="MTHPAIGDTAPAISLPRDGGDIVNLSDFAGKTVVLYFYPKDDTP GCTTEAIGFTQSVDDFAAAGAVVLGVSKDSVAKHAKFVAKHDLKIALLSDEAGDVCER YGTWVEKSMYGKTYMGIERATFLIGPDGKIAQVWPKVKVSGHVDAVLAAVKAL" gene 542493..545825 /locus_tag="SKA53_02806" CDS 542493..545825 /locus_tag="SKA53_02806" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGGESLPDPIPEPVPDQPQPADPVRALWPLSRVRLVLRGVLLVC LMPLVFALVAGVMIIDREITAPSWITAQVQDRGTEVLDGGRLRFAAISVRIGRDLHPT IRLIDTQLIDRNGALVTRIPVVEADLSPRGVILQRAVLVQQVRIIGAQINLRRARDGS LGLALGAGNQLRTRSLPEWLDEIDLFLDRPVFDALRTAQVSGLIVNYDDARARRNWTV DGGQVDLDMRGGQLTVQAELALLSGRADVTTALLSYASPRDSRAADLAVTINNIAASD IAAQSPALNWLRDVAAPLSATLRTTLDETGALGALRASLDIGAGVLQPTPASDPVGFS AARAELTYDPTLDLIRFSDIAVQSEWGSLQASGDAYLRDFADGLPRALLAQFQLRDVA LNPPGLFDVPPLIDGASVDLRLSLDPFVVDIGQAIVRDGASRVMAQGRIAATDAGWQV AVDAVIDALAPDRLRAVWPNGFRPGTRDWFDRNMLAGQLSDLHFGLRLEPGQPPIIAG HFSFADAAVRVMPALPPVTQARGTGHLIGHRFVIVVDNGMMIAPHGGPIQLDGTSFAI ADLRQKPGLATLDLQAQSRLPDLLSVINQPPFSFLDKAGLPVTIAQANAQAQGSVNWP LLKRTPREMVRFDIGVDLTDMRSDLLVPGRVLTAAGMQVTVDETGLSITGPVQLDGVA ADAQWTRSFARHAPRGSQLQAELMISDAALRAFGVALPPGMISGAAAARLQVTLQPDA PPQFVLTSDLDGLRLALPPIGWAKAAATKGDLRIEGRLGPVPEITRLSISGGGLQAEG RITMAAGGGLAQAAFSRLRIGNWLDAPVTLNGRGADQAPAIVVQGGMIDLRRARFGAG GGVQGGAGGSPVQIALDRLVVTEGLVLTGFRGDFTSVAGFIGQFSARINDSAAVTGTI APRAGRSAIRLRSDDAGNVLLASGLFRSAIGGTLDLTLLPAADAGTFDGVLAVRSVRV RDAPTIAALLDAISVVGLLQQMDGQGLSFDEVDVQFRLTPDEVIVSQASAVGPGLGIA VNGIYTLAAKGFDLQGVVSPFYLVNSIGAFLTRKGEGLVGFNFTIAGTPDAPRVSVNP LSALTPGLFREIFRRPPPELIQ" gene 545822..546877 /locus_tag="SKA53_02811" CDS 545822..546877 /locus_tag="SKA53_02811" /note="COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine:tRNA ribosyltransferase-isomerase" /db_xref="CDD:25921" /translation="MKLSDFDFDLPEALIATRPARPRSSARLLLAQGDRIADQIVTDL VDILQPGDRLVLNDTKVIPARLNGTRARSGEAGDTSARIEVTLLEPRADGSWSALVKP LKKLRDGEVVVFSADLSATMTGRGDGQAYLQFNLTGDDFDAALNAVGAMPLPPYIAAK RAADAADMDDYQTYWAKHAGAVAAPTASLHFDGPLLQALAARGVTMSYVTLHVGAGTF LPVKVDDVSEHKMHAEWGEVTATAAAQINATKAAGKRVIPVGTTALRLIESAAKGGQL QPWTGPTDIFITPGFTFQIADGLMTNFHLPKSTLMMLVSALMGMDRIKAIYAHAIAER YRFFSYGDASLLLPDRA" gene 546997..548220 /locus_tag="SKA53_02816" CDS 546997..548220 /locus_tag="SKA53_02816" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:11976" /translation="MFLLMVGNGLQGTLLGLRGEMEGFSTLALSVVMSAYFLGFLFSS RFTPELIRRVGHVRVFAAMGSMISAVLILYPTLVDPIAWTVGRVIMGFCFCGVYITAE SWLNDASSNANRGKALSLYMIVQMAGIVFAQYVVSIGDVSGYVIFIIPSVLVSLAFAP VLLSARPMPAFSATKPMKIKDLIKTSPLGCAGMFLLGGVFAAQFGMSAVYGSRVGLSV GEISFFISAIYVAALVLQYPIGWLSDRMDRRRLIIWIAMLGGLGSLIAFIVPGSFLLI ILSGAIVGGTSNPLYALLIAYTNDYLEKEDMAAASGGLLFINGLGAIMGPLIVGLMMD VIGDNGFWLFTAVLMLGVGIFGMVRATQRDRGALDLDQVPYAPVSAGSSAVAVGVAQE VYLDAASDEIAARTD" gene 548320..548901 /locus_tag="SKA53_02821" CDS 548320..548901 /locus_tag="SKA53_02821" /note="COG3803 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24914" /translation="MTREDEVLAFWLDECSPADWYKSDPDFDALIRDRFEQTWRDATE GSLGLWLTHATGTLAYIILTDQFPRNMFRDTAKAFSTDFLGLAAAKMAIDRNWDMKIA EPARQFFYLPLMHSETLSDQDRAVRLIHSRMPETGDNNRDHARAHRRIIRDFGRFPYR NAALGRRTSPAEQTFLDAGGYGFALRALQEKPA" gene 549002..550396 /locus_tag="SKA53_02826" CDS 549002..550396 /locus_tag="SKA53_02826" /EC_number="1.8.1.4" /note="COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /codon_start=1 /transl_table=11 /product="dihydrolipoamide dehydrogenase" /db_xref="CDD:10966" /translation="MAAKNFDLIVIGAGPGGYVAAIRAAQLGMNVVVVERENLGGICL NWGCIPTKAMLRSSEVFHLMHRAKEFGLSVEKVSYDLDAVVKRSRGVAKQMEGGVKHL LKKNKVTVIMGEATIPAKGKVSVKTEAGTEELTAKNIVLATGARARNLPGLEADGARV WSYRHALVPPHMPKKLLVIGSGAIGIEFASFYNTLGAETTVVEVMDRVLPVEDAEISA FAKKQFVKQGMVIMEKATVKQLDRAKDKVTAHIESGGKVETREFDTVISAVGIVGNTE GLGLEALGVTIDRTHVVTDEYCRTGVEGLYAIGDIAGAPWLAHKASHEGVMVAELIAG KHAHPVKPESIAGCTYCHPQVASVGYTEAKAKELGYTVKVGKFPFIGNGKAVALGEPE GLIKTVFDAKTGELLGAHMVGAEVTELIQGYVIGRQLETTEEDLMNTVFPHPTLSEMM HESVLDAYDRVIHM" gene 550574..553438 /locus_tag="SKA53_02831" CDS 550574..553438 /locus_tag="SKA53_02831" /note="COG0178 Excinuclease ATPase subunit" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit A" /db_xref="CDD:10053" /translation="MAELKYIAVRGAREHNLKNIDVDIPRDQLVVITGLSGSGKSSLA FDTIYAEGQRRYVESLSAYARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVG TITEIYDYLRLLFARAGTPYSPATGLPIEAQQVQDMVDRVMALPEGTRGYLLAPIIRD RKGEYRKEFLDLRKQGFQRVKVDGQFYELDEPPTLDKKFRHDIDVVVDRIVVRAGLET RLADSFRTALDLADGITVLETAPAEGEGAPERITFSEKFACPVSGFTIPEIEPRLFSF NAPFGACPDCDGLGVELFFDEQLVVPDVTLKISDGALAPWRKGKSPYFLQTIESIAKH YGFNKNARWKDLDPKVHNVFLRGSGSEEIKFRYDEGGRVYQVERPFEGVIPNMERRYR ETDSNWIREEFEAYQNNRSCGTCGGYRLRAEALAVKIGGQHVGQVVQMSIKEAYDWCL TVPDSLSKQKNEIAVAILKEIRERLGFLNNVGLDYLTLARNSGTLSGGESQRIRLASQ IGSGLQGVLYVLDEPSIGLHQRDNDRLLTTLKNLRDQGNTVIVVEHDEEAIREADYVF DIGPGAGVHGGQVVAQGTPAEIMANENSITGLYLTGKREIAVPKTRRKGKGKKITVVK ASGNNLHDVTADFPLGMFVCVTGVSGGGKSTLTIETLFKNASQKLNGARQTPAPCETI KGFEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKARGYKPGRFSFN VKGGRCEACQGDGVIKIEMHFLSDVYVTCETCKGARYNRETLEIKFKGKSIADVLDMT VEEAQGFFTAVPSIREKMDALMRVGLSYIKVGQQATTLSGGEAQRVKLSKELARRSTG RTLYILDEPTTGLHFEDVRKLLEVLHELVDQGNSVVVIEHNLDVVKTADHVIDIGPEG GDGGGRIVAVGTPEQVAEVAESHTGRYLKPMLTPRKVAAE" gene complement(553503..554369) /locus_tag="SKA53_02836" CDS complement(553503..554369) /locus_tag="SKA53_02836" /note="COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases" /codon_start=1 /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /db_xref="CDD:11792" /translation="MKIGFIGLGNMGAPMAANLARDHEVTGFDPVAQPTGLTLAPSAA AAAQDADVVITMLPDGNILRTVAAELHPAMKQGAIHLDCSTVDVDSARTVAAQAIAHG LYAIDAPVSGGIGGATNGTLTFMAGGPLPAFETVAPLFAIMGQKAVHCGAAGNGQAAK ICNNMILGVTMIATCEAFALADKLGLDRQAMFDVVSTSSGASWSMTSYCPAPGIGPVS PADNGYQPGFAAELMLKDLRLSQQAAEAAQADTPLGQAATALYARFVETEDGRGKDFS AMLPRFETRQRP" gene complement(554366..555388) /locus_tag="SKA53_02841" CDS complement(554366..555388) /locus_tag="SKA53_02841" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /db_xref="CDD:10752" /translation="MSDIIIRKDGRAGLITLNRPKALNALTWDMCLAIEAALDDWRTD HLVDLILIDGAGDRAFCSGGDIADMYASAQRRDFGYGQRFWRDEYRLNRKIHHYPKPI VTFLHGFTMGGGVGIGCHASHRIVCDDSRIAMPECSIGLVPDVGGSLILARAEGYLGT YLGLTGDRMDAGDAIHAGFADHYIAAPSWEALKSVLITTGNVAAIQPSPPPPSRLKDW QKAIDAAFGTPDLTDIRTKLAAQGGTLADHALPLLDYNAPLAMAVAARIIGAVRRDPR IETALDHEFRYTFRCAAQGDFIEGIRAAIIDRDRSPRWQNYTDDDITAMTAPLGKDAL IWEDAT" gene complement(555385..556521) /locus_tag="SKA53_02846" CDS complement(555385..556521) /locus_tag="SKA53_02846" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /db_xref="CDD:27637" /translation="MDFALTEEQSAIFDMALAFGQEHIAPFARDWDSDGTIPKALWPK LAELGFGGLYVSEDSGGAGLSRLDATLVFEALSYSCASVAAFLSIHNMCARMIDSYGS DDLKARILPRALSMDLILSYCLTEPGSGSDAAALKTRATCNNETYLLTGTKAFISGGG YSDAYIVMARTGDAGPKGISAILIEGDAPGLSFGGLEDKMGWRSQPTRQVQLDDCATP LGNLLGVEGQGFSYAMAGLDGGRLNIAACSIGAAQCALDQTLAYMKDRKAFGQSLDQF QGLQFRLADAEIALQSARTFLRQAAWKLDTGAPDATKFCAMAKKLCTETGSMVADQCL QLHGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRLITARQMIR" gene complement(556614..558113) /locus_tag="SKA53_02851" CDS complement(556614..558113) /locus_tag="SKA53_02851" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="methylmalonate-semialdehyde dehydrogenase" /db_xref="CDD:25427" /translation="MQELTHYIGGAHVKGTSGRFADVYNPATGEVQARVPLANAAEMD KAVQIAAEAQPKWAKVNPQRRARVMMAFVGLLNRDMDKLAEALSREHGKTIPDAKGDV VRGLEVVEYCIGAPQLLKGEFTDSAGPGIDMYSMKQALGVTAGITPFNFPAMIPMWMF APAIACGNAFILKPSERDPSVPLMLAELMEEAGLPKGILQVVNGDKEAVDAILDHDVI QSIGFVGSTPIAEYIYGRGCANGKRVQCFGGAKNHMIIMPDADMDQAADALIGAGYGA AGERCMAISVAVPVGEETADRLIEKLVPRIEALKVGPYTSGNDVDYGPVVTAAAKANI LKLIESGVAQGADLVVDGRDFKLQGYEDGFFVGPHLFDRVTKDMDIYTKEIFGPVLSV VRAQNYEEALGLAMDHEYGNGTAIFTRDGDAARDFANRINIGMVGINVPIPVPLAYHT FGGWKKSMFGDLNQHGPDAFKFYTRTKTITSRWPSGIKDGSAFSIPLME" gene 558209..559111 /locus_tag="SKA53_02856" CDS 558209..559111 /locus_tag="SKA53_02856" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /db_xref="CDD:10453" /translation="MDNWDDMRVFLAVARMESLSAAAPLTKMDPATLGRRITRLERSL GAALFVKSPQGYALTDLGERLRDRAADAETQFALAIEETRGGATALTGQIRIGAPDGV ANFLLPQVCAALQRDNPDLEMQVLALPRVVNLSRREADMAITVSPPAAGQLIVQKITD YQLHLAMRADAPPAETLDDLRGRPVVGYIPDMIFDKELDYLGALGAGGVQLASNSVAV QLQMIRAAGVGIVHDFALPFAPELRRILTDKVSLTRTLHLVRHKSARQSDRLTRVASA LSAGLLAEVARLERIACLTDAPAV" gene 559150..559584 /locus_tag="SKA53_02861" CDS 559150..559584 /locus_tag="SKA53_02861" /note="COG0517 FOG: CBS domain" /codon_start=1 /transl_table=11 /product="Protein containing a CBS domain" /db_xref="CDD:12254" /translation="MIVGQILKTKADMGVVSVKPTDMVTDAVTLLSQNRIGTVVVSGD GVTLDGILSERDIVRELGKRGVSCLSAPVSEIMTAKLTTCTTADSADLVLQMMTEGRF RHLPVMDNGTMIGLISIGDVVKARLSELSMEKDALEGMIMGH" gene 559681..560175 /locus_tag="SKA53_02866" CDS 559681..560175 /locus_tag="SKA53_02866" /note="COG0669 Phosphopantetheine adenylyltransferase" /codon_start=1 /transl_table=11 /product="pantetheine-phosphate adenylyltransferase" /db_xref="CDD:10538" /translation="MRVGLYPGTFDPVTLGHLDIVRRAASLVDRLVIGVAINRDKGPM FTLEERVAMVEAECVPLGRDVGCEIIVHPFENLLITCAHDVGANVIIRGLRAVADFEY EYQMVGMNRILDDSIETVFLMAEAEHQAIASKLVKEIARLGGDVSKFVTPAVNDALIA RLRG" gene complement(560233..561234) /locus_tag="SKA53_02871" CDS complement(560233..561234) /locus_tag="SKA53_02871" /EC_number="1.2.1.12" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /db_xref="CDD:9932" /translation="MAVKVAINGFGRIGRNILRAIIESGRTDITVVAINDLGPVETNA HLLRFDSVHGRFPGTVTTTETSIDAGRGPIAVTAIRNPADLPWGDVDVVLECTGIFTS KQSCQAHLSTGAKRVLISAPGTDADKTIVFGVNHQSLTKDDIIVSNASCTTNCLSPVA KVLNDAVGITKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLV LPELNGKLDGVAIRVPTPNVSVVDLTFEASRATTAEEINNAIIAAADGPLKGILGYTA LPMVSSDFNHDPHSSIFHLDQTKVLDGNMVRILSWYDNEWGFSNRMADTAVAMGKLL" gene complement(561314..561457) /locus_tag="SKA53_02876" CDS complement(561314..561457) /locus_tag="SKA53_02876" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTNGIAVFLLVLIGAALAYDGLANDWQAFTFSLRKFVDLTEYLA FWR" gene complement(561483..562484) /locus_tag="SKA53_02881" CDS complement(561483..562484) /locus_tag="SKA53_02881" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase, type I" /db_xref="CDD:9932" /translation="MTITIGINGFGRIGRCTLAHITEAGRNDVQVVKINATGPIATNA HLLKYDSVHGRFGHPVSVKGNTLDLGRGPIDVMSSYDPATLDWDGVDVVLECTGKFND GHKAAVHLDRGARKVLISAPATNVDRTVVYGVNHRDLLATERLVSNGSCTTNCLAPLA KVLNDAIGIERGIMTTIHSYTGDQPTLDRRHDDLYRARAAAMAMIPTSTGAAKALGEV LPELAGKLDGTAMRVPTPNVSAVDLTFEAGKSVTVAEVNAIVAEAAGGYMGMVLAYDD EAKVSIDFNHTTQSCIFAPDQTKVVGGRTVRVLAWYDNEWGFSARMADVAATMGRLQ" gene complement(562663..564681) /locus_tag="SKA53_02886" CDS complement(562663..564681) /locus_tag="SKA53_02886" /EC_number="2.2.1.1" /note="COG0021 Transketolase" /codon_start=1 /transl_table=11 /product="transketolase" /db_xref="CDD:9897" /translation="MDIAALRSAHPDHWKKATAIRTLTLDAVAAANSGHSGMPMGMAD VATVLFQNHLKFDPKSPAWPDRDRFILSAGHGSMLLYALMYLTGYEDITLQQIKDFRQ WGAKTAGHPEYGHARGIETTTGPLGQGIANSVGFAIAEEIQRAHWGAKIVDHHTYVIA GDGCLMEGVSQEAIGLAGMQKLGHLVVFWDNNNITIDGTVDIADITDQPARFAASGWH VQEIDGHDPVAIDAAIVAAKADPRPSMIACKTHIALGHAAQDTSKGHGALTNADQLAA AKTAYGAPMGAFEVADDVLDAWKAIGARGAATRAAWDARFAALSAARQAEFTRAYAGD APKKLSATIRALKKQISESAPSVATRKSSEMTLEVINPIMPETIGGSADLTGSNNTKT GDLGVFHPDTRKGRYIYYGIREHGMAAAMNGMALHGGARAYGGTFMCFTDYARGAMRL SALMGVPVTYVMTHDSIGLGEDGPTHQPIEHLAMLRATPNMHVFRPADTIETAEAWEI ALTSKTTPSVLALSRQNLPTVRKTHTNKNLTAQGGYVLTDADGKRQAIIMATGSEVEI ALAARDLLQAQGIGTRVVSMPCWELFEEQDASYRRRVLPAGPVRVAVEAGIRFGWDRW LFGEGGKREKSGFVGMHGFGASAPAERLYAEFGITAQGVADKVKSLIK" gene complement(564694..564936) /locus_tag="SKA53_02891" CDS complement(564694..564936) /locus_tag="SKA53_02891" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDLSHSATPDCPDQGQTFTPVSTPVSGAYPESFRHFQILCDQP QRGKRADGIDQNRLAVALDLGGDPVMTLFIEFNPFG" gene 564936..565481 /locus_tag="SKA53_02896" CDS 564936..565481 /locus_tag="SKA53_02896" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSDVLELGHRITVALDRIRRGMEAQDKADAAESSLFDALRAEQA QTGALRDQIQQLQAALETQDAQAAQAALDAQIADQAALHAKDAQVAALTVRLETQAAQ LQTMDAHLQGLRAATQQLRDLNGQLRQALTVGLAPGMIDTALAAEIDALQALRATDAA EIDMILAELKPLIEDAAHAAG" gene 565468..565860 /locus_tag="SKA53_02901" CDS 565468..565860 /locus_tag="SKA53_02901" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPQVEIFIGGRTFEVACQEGEEHFLHSAAAMLDAEAATLAEQIG RLPEARMLLMAGLLLADKTAGLEDKLREAQVEAVALRAKLDDAQAQPAPAPQRIEVPV VPVDVVDTLAELAARAEALADQVDAKLA" gene complement(565861..566250) /locus_tag="SKA53_02906" CDS complement(565861..566250) /locus_tag="SKA53_02906" /note="COG0278 Glutaredoxin-related protein" /codon_start=1 /transl_table=11 /product="glutaredoxin-related protein" /db_xref="CDD:10152" /translation="MKHDLTKDRHMTAKDQIQETITSNDVVLFMKGTKSMPQCGFSSR VAGVLNFMNVDFADVNVLADEEIRQGVKDFSDWPTIPQLYVKGEFVGGCDIITEMTLS GELDTLFAEKGVSFDKDAAEKIREANA" gene complement(566247..566483) /locus_tag="SKA53_02911" CDS complement(566247..566483) /locus_tag="SKA53_02911" /note="COG0271 Stress-induced morphogen (activity unknown)" /codon_start=1 /transl_table=11 /product="BolA-like protein" /db_xref="CDD:14137" /translation="MPITAHEIETLLRESFPQARISVQGDDGAHFAAEVIDESFRGLN RVQQQRAVYAALKGRMDGSQGELHALALTTKAPD" gene complement(566584..568743) /locus_tag="SKA53_02916" CDS complement(566584..568743) /locus_tag="SKA53_02916" /EC_number="6.3.5.3" /note="COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase subunit II" /db_xref="CDD:9921" /translation="MTEPAITPDLIAAHGLKPDEYQRILDIIGRTPSFTELGIFSAMW NEHCSYKSSKKWLRTLPTTGPQVICGPGENAGVVDIGDGQAVVFKMESHNHPSYIEPY QGAATGVGGILRDVFTMGARPIAAMNALSFGEPSHPKTRQLVNGVVAGVGGYGNAFGV PTVGGEVRFHAAYNGNCLVNAFAAGLADADKIFYSAASGVGMPVVYLGAKTGRDGVGG ATMASAEFDDSIEEKRPTVQVGDPFTEKRLMEATLELMATGAVISIQDMGAAGLTCSA VEMGDKGGLGIRLNLDAVPQRETGMTAYEMMLSESQERMLMVLRPELESQARAVFVKW DLDFAIVGETIPEDRFIVVHKGVVMADLPLATLSGSAPEYDRPWVPTPAQPPLGDVVG VNPIDGLRALISSPNYAAKQWVYEQYDAQVMGDTARIPGLGAGIVRVHGTDKSLAFTS DVTPRYVMADPVEGGKQAVAEAYRNLTAVGAKPLATTDNMNFGNPEKPEIMGQFVGAI QGIGAAVTALDMPIVSGNVSLYNETDGKGILPTPTIGAVGIITHPDQIISGQLRDGHV LLVVGDTTGHLGQSALLAEVYHRAEGPPPPVDLDAERRHGDFIRANHTLITACTDLGD GGLALAVFELAESAGVGITLDAGDTPTLFGEDQARYLIGCNFDQAEALMVAAGQAGVP VTTVGKAGGDQITFGSDSAPLADLALIYRTSFEKALA" gene complement(569070..569975) /locus_tag="SKA53_02921" CDS complement(569070..569975) /locus_tag="SKA53_02921" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /db_xref="CDD:10453" /translation="MDWDKLRIFHAVADAGSLTHAGDTLHLSQSAVSRQIRALEETLN TTLFHRHARGLILTEQGELLFDATKSMNKRLETASARIRDSEEEVFGDLRVTTTTGFG TLWLAPRLPKLFEAYPDLKIDLMLEERVLDLPMREADVAIRMKEPSQADLIRKRLMSV RMRLYASPTYLETNGTPESLLDLSDHRLVCQSLNSIQVAAGATLVQHLLTSDIQHLFT VNNYFGVLQGVLNNIGIGVLPDYVTEDFPDLVRVLPDLESGEVPVFLAYPEELRQSKR IAAFRDFVQEEIFAHRRKIREAAPQ" gene 570129..573542 /locus_tag="SKA53_02926" CDS 570129..573542 /locus_tag="SKA53_02926" /EC_number="1.2.7.8" /note="COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits" /codon_start=1 /transl_table=11 /product="indolepyruvate ferredoxin oxidoreductase" /db_xref="CDD:13481" /translation="MGRHEITLDDRYDLHKSPVLLNGTQALVRLMLMQKARDTRAGLH TAGYVTGYRGSPLGAVDMQMARAKNVLEPADITFQPGLNEDLAATALWGSQQAELRGE GKFDGVFGLWYGKGPGVDRSGDVMRHANMAGTSPHGGVIMAMGDDHTGESSTTLHQSD WAMVDAYMPIVSPAGVQEILDYGLYAWALSRYAGVWVGLKTMKDTVEVTSVVDADPFR ADFVTPDMALPDGGLNIRLVDTPQLQEARMIDHKRFAAEAFSRANKMDQRKWGKAGAK IGFVAAGKNWLDLQHALALLNISEGDAERLGITTYKVGQVWPLDMASFHDWAAGLDLV IVVEEKRKLIEVQVKEALFDDSRTRVYGWHKGDEHSEGRREEIFPTRAALDPIWIAEK IGGILIEEGCGSDGISAGMTALAEARRADNAPELAARLPYFCSGCPHNSSTKVPEGSR AYAGIGCHYMVQWMDRDTVGFTQMGGEGANWVGEAPFSTRDHVFQNLGDGTYNHSGVQ AIRFALMAGTNITYKILYNDAVAMTGGQGNDGGLTPDQICRELQAMGVRNIALVHDAK EDLDLSVFPAGLDINERADFEAVQKKFSKYKGVSAIVYVQTCAAEKRRRRKRGQFPDP DKRVFINTDICEGCGDCGVQSNCVSIVPVETELGRKRAIDQSSCNKDFSCVKGFCPSF VTIEGAQIRKDATAAVDLPDMPDPVLPAIHGTHNTVITGVGGTGVVTIGAVMAMAAHI DGKGAGMMEMAGLAQKGGAVHIHCRIAEKPGDISAIRVATGECDTLIGGDLVVSAGAK TLGLMRAGRTRGVVNSHEIITGDFTRDTAFTLPTDALRLSLQARLGENVMLFDASDLA RALLGDSIYSNMMIFGAVWQMGAIPLTRQAIIDAIDLNGAAVKRNIAAFDYGRWAYLH PADAAAILAPDVVVLPQTLDDKIAFRMTHLTQYQSARLARRYRTFVDQFRDEPLREAV ALGYHKLLSYKDEYEVARLLTQTRAKAAATFDGDLKLTYHLAPPIMSKTGSDARPVKR EFGARMAWAFPKLAQFKFLRGTLLDPFGRNPERRMERALIAQYEADMAQVLRILRPDT HDAAVALARLPLDIRGFGPVKDAAARKAAKRREELLTSLHAAPMQQAAE" gene 573622..574530 /locus_tag="SKA53_02931" CDS 573622..574530 /locus_tag="SKA53_02931" /note="COG3176 Putative hemolysin" /codon_start=1 /transl_table=11 /product="acyltransferase domain protein" /db_xref="CDD:12514" /translation="MMRKDRQVARDITYATSAKGRGGRALIRVMENATGRLRLIKKAR GYDRDVAQGADFWQVITARYGLDLQIAGGSLDDIPSSGPLIVVSNHPYGILDGLMMGL ILSQRRGGDFKVLAHRIFRASPDLEKVILPISFDETKEAAKLNLETRAEAVRYLAAGG AIGIFPGGTVSTSAKPFSPPMDPSWRNFTAKMIAKSDAVVVPIFFEGRNSRLFQLASH LHVTLRMGLLIREFKARINKPVRVVIGKPIAADALAGLKKDPKACMDFLRKATYELSL DPLDPTMIGHEFEDKYKVRDGRRDIR" gene 574508..575320 /locus_tag="SKA53_02936" CDS 574508..575320 /locus_tag="SKA53_02936" /note="COG0796 Glutamate racemase" /codon_start=1 /transl_table=11 /product="Glutamate racemase" /db_xref="CDD:10664" /translation="MAVGIFDSGLGGLTVLDAVAKRLPDVPLVYLGDSAHAPYGVRTP DDIYNLTTAATQRLFDAGCDLVILACNTASAAALRRMQESWVPQGKRVLGVFVPLIEA LTERQWGDNSPPREVAIKHVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDA IEDGDMILAEALVRSHVDALRRKMPNPDAAVLGCTHYPLMEKVFQDALGPQAKVFSQA NLVAESLADYLSRRPEMVGTGRDSAFLTTGDPARVSARATQFLRRQITFTAA" gene 575333..576361 /locus_tag="SKA53_02941" CDS 575333..576361 /locus_tag="SKA53_02941" /note="COG0002 Acetylglutamate semialdehyde dehydrogenase" /codon_start=1 /transl_table=11 /product="N-acetyl-gamma-glutamyl-phosphate reductase" /db_xref="CDD:9878" /translation="MTYNIAILGASGYTGAELVRLIATHPHLRIAALSADRKAGQQMA DVFAHLRHLDLPALVKMEDIDFSGIDLVFAALPHRLSQALVRDLPQAVKVVDLGADFR LRDPADYEKWYGAPHVAPELQKTAVYGLTEFYRDEIKSARLVAGTGCNAATVQFALRP LIAGGLIDLDDIICDLKNGISGAGRSLKENMLFTERSTDVLGYSQGGKHRHLGEFDQE FSALAGRKVEIQFTPHLVPISRGILASCYLRGDAQAIHAALSVAYADEPFIHVLPFGQ CPGTGHVMGSNFCHIGVTSDRISGRALVVATLDNLCKGSSGQAVQNANLMLGLNETDG LMLVPVFP" gene 576358..576825 /locus_tag="SKA53_02946" CDS 576358..576825 /locus_tag="SKA53_02946" /note="COG2332 Cytochrome c-type biogenesis protein CcmE" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmE" /db_xref="CDD:12008" /translation="MSGLKNLKKRRRVQVISIAGACVAFVLVLLWFLPSDSFQFFRSP SEVAEATPMPNERFRLGGLVETGTLVRGQGQEISFAVTDGGASIPVVYAGILPDLFSE GEGVVAQGNMINGRFEAVEILAKHDETYMPTEVLDALKAQGVYVDPNGARITN" gene 576870..577481 /locus_tag="SKA53_02951" CDS 576870..577481 /locus_tag="SKA53_02951" /note="COG3926 Putative secretion activating protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24062" /translation="MQSITDIAAEIVAREGGYVNDPDDPGGPTKYGVTIHTMRRLGLD LTGDGTIDASDVQRLDHTQAVTIFVEHYYHRPRIDRLPQVIQASVFDMYVNAGVNAVR ILQRLLVDMRLPVAVDGVIGPQTITAASRAAEAAPDHLADAYGIARRNYYYDLADRRP ASRKYARRRDGGKGGWITRAEEFISSHYHLTAAQHQQRTATWA" gene 577493..577963 /locus_tag="SKA53_02956" CDS 577493..577963 /locus_tag="SKA53_02956" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGLLFGNSRNVLVDTAQVFRPNAERSAIRDADAKSESLQQFAAE FVHARQGLFDRAVDALNRLPRPMLALGTIWLFVMAMLDPDGFAAGMAGLALVPEPLWW LMGAIVSFYFGARHQAKEQDFQRVLAAAVVARQPGPAPDDTNPALRDWQASHGN" gene 577953..578156 /locus_tag="SKA53_02961" CDS 577953..578156 /locus_tag="SKA53_02961" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="METSVLDRFESRLRQLETRNAVDAVHRDNVATRLGAIEDTLKWL VRLIIGGMLMAAVSYVVQGGFTL" gene 578231..580207 /locus_tag="SKA53_02966" CDS 578231..580207 /locus_tag="SKA53_02966" /note="COG1138 Cytochrome c biogenesis factor" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmF" /db_xref="CDD:10858" /translation="MLNELAHFALILAFGVAIVQMIIPLIGAERGNVGWMSLAEPAAT IQFLLTGFAFAALTWAFVVSDFSLQLVYLNSHTDKPLIYKITGVWGNHEGSMLLWVLI LALFGACAGWFGGNLPMRLRARVLAVQGAISVAFLAFVIFTSNPFTRLEFPPLNGRDL NPLLQDPGLAFHPPFLYLGYVGLSMAFSFAVAALIEGRVDAAWGRWVRPWTLAAWMFL TVGIALGSWWAYYELGWGGFWFWDPVENASLMPWLISAALLHSAIVVEKREALKSWTI LLAILAFGFSLLGAFIVRSGVLISVHAFAVDPERGVLLLIILGIFLGGSLTLFAFRAS AMQSKGVFSTVSRESALVLNNILLAVSCFVVFIGTMWPLVAEMLFDRTLSVGPPFFDA AFTPFMVGLAIALPLGSMLAWKRGTLDRMSKAMVGWLALAVALAALAYAVQSGGSALG PVGVALGVWVVGGALADLWLRAGRDDLRTRLRRIRNLPRADWGKATAHIGMGVTVFGV AAMLAWQKEDIRIADIGDRWDMGAFQVQLDAVNQIEGPNYVTTMADMSIWRGDRELYT LQPEKRFYPVANMPTTEAAISNGIIRDVYVVVGDPQVNGGWAVRTYDKPFANWIWGGC MLMALGGLLSLSDRRLRVGAAAPKPERPGAVPAE" gene 580204..580644 /locus_tag="SKA53_02971" CDS 580204..580644 /locus_tag="SKA53_02971" /note="COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes" /codon_start=1 /transl_table=11 /product="cytochrome c biogenesis family protein" /db_xref="CDD:12427" /translation="MIRLIAIFLLVASAAFAVQPDEVLDDPVLEKRARDLSQGLRCPV CRNESIDESNAELSRELRILLRERLVDGDSDEQAVDFLVARYGEFVLLRPDTSGVNVV LWYAAPVMLLIALGIGWSVIRRPAVAPPELSDAEKAELQKILRS" gene 580695..581492 /locus_tag="SKA53_02976" CDS 580695..581492 /locus_tag="SKA53_02976" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /db_xref="CDD:10752" /translation="MSNKDRIMDYQAVTLTIRDAVATLMLNRPTVMNALNTQMRAEIA HAVKAAEKDARVLVMTGAGKAFCSGQDLGDGGSAASIDLERTLRDEYVPMLKAIFDCR IPTIAAVNGAAAGAGANLALACDVVIAADSAYFVQAFTRIGLIPDAGGTYWLPRQVGA AKAMGAALFADKISAQQASDWGMIYEVVSDAGFADHIAARAAHLAQGPTVAYRQLKKA IRGSFENTLDDQLALEARLQGRCGQTRDFQEGVVAFLEKRKPVYEGR" gene complement(581544..582839) /locus_tag="SKA53_02981" CDS complement(581544..582839) /locus_tag="SKA53_02981" /note="COG0372 Citrate synthase" /codon_start=1 /transl_table=11 /product="citrate synthase I" /db_xref="CDD:22965" /translation="MAETTDTAKLTIKGKTYDLPVYSPTTGPDVLDIRKLYAQADVFT YDPGFTSTAACDSTITFIDGDKGELLHRGYPIDQLASQSHYLEVCYLLLYGELPSAAE LEKFESLVTNHTMIHEQMHNFFRGFRRDAHPMATMVGVVGAMSAFYHDSTDINDEHQR EVASIRLIAKMPTIAAMAYKYSIGQPFVYPRNDLDYAANFLHMCFAVPAETYHVNPIL ARAMDRIFTLHADHEQNASTSTVRLASSSGANPFACIAAGIACLWGPAHGGANQACLE MLKEIGTPDRIPEFIARAKDKNDPYRLMGFGHRVYKNFDPRATVMKQSADEVLDLLGV ENNPVLQVAKELERQALADPYFAEKKLFPNVDFYSGIILEAMGFPTSMFTPVFALART VGWISQWKEQLADPQLKIGRPRQLYLGSTARDYVDIENR" gene complement(582929..584329) /locus_tag="SKA53_02986" CDS complement(582929..584329) /locus_tag="SKA53_02986" /note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /db_xref="CDD:9884" /translation="MSRPVVTRFAPSPTGALHIGGARTALFNWLYARGRGGKFLLRIE DTDRARSTPENAQAILDGLTWLGLDWDGDPVSQFDSAARHAQVAHDLLAAGKAYKCFS TQDEIEAFREQAREQKTSTLFRSPWRDVPAADHPDLPFVIRIKAAREGTTTLHDEVQG DVTWSNDQLDDMILLRSDGSPVYMLAVVVDDHDMGVTHVIRGDDHLANAFRQNLIYDA MGWPKPVLAHIPLIYGPDGKKLSKRHGATGAAEYQALGYPAAGMRNYLARLGWSHGDA EFFSDAQARDWFDLHGIGKSPARFDTAKLEHLCGQHIAVADDAALLHELQGYLAATGA APLGDAQKDGLLRGMYCLKERAKTFPELVEKAHFILTSRPIVPDEKSAAQLTDVSRGI LSELTPQLQNASWTRDTLESIVATIAQAHDTKLGKLAGPLRTALAGRSVSPSVFDMML VLGQSETIGRLSDASK" gene 584422..586488 /locus_tag="SKA53_02991" CDS 584422..586488 /locus_tag="SKA53_02991" /note="COG0658 Predicted membrane metal-binding protein" /codon_start=1 /transl_table=11 /product="competence protein" /db_xref="CDD:26138" /translation="MVEDALLAQRGGLLCWVPVWLGLGIGWYFAQRQEPGDAGLAIGG AVAFALLLALPRIGVAYRPVVLAIIIAMIGAGIAKYRSEAVGAPVLNFRYYGTIEGRV VNIDRSASDALRLTLDRVVLDRIAPHRTPARVRVSVHGDQPFSDYRPGTVLMMTGHLS PPAGPAEPGGFDFQRHAWFLGLGAVGYTRNPVLRLAAPAAPDAMMRIFALRMAISRAV QEAMPGEAGAFAAALMTGDRSGMGQDGLAALRAANLAHLLAISGLHMGLLTGFVFAVV RYGLALVPAVALRLPTKKIAAVIALIVGAFYLALSGGNVATERAFVMVAVMLVAVLLG RRALTLRGVAIAAIIVLVWQPEALTGPGFQMSFAATIALVAVFRALRGAKLHRLPRWT RPVMSVFVSSLVAGLATAPYAAAHFNIMSHYGLIANLISVPLMGVLVMPAAVLAACLW PLGLAWIGLAVMEPGLRWILFVAQTTAAQPNAVSHVIAPPGAVLPILTLALLWLILWQ GRARFAGLAFAALAFVIWQQGTRPALLVADDGGLIGVLGPEGRSLSKPTGGSFSAGIW LENDGAPVAQDIAAARGGVQRDGRVVTAMLGEWRIVQVSGKTALAALQGCGGADVLIV NQVDEVARPCHVYDLTGLRRTGALAMDLTATGDLRIETSRARAGNRPWNGRTGPPEAA LLLSRQ" gene complement(586482..587165) /locus_tag="SKA53_02996" CDS complement(586482..587165) /locus_tag="SKA53_02996" /EC_number="3.4.21.88" /note="COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)" /codon_start=1 /transl_table=11 /product="LexA repressor" /db_xref="CDD:11682" /translation="MLTKKQLDLLAFIHTRVQRDGVPPSFDEMKEALDLRSKSGIHRL ITALEERGFIRRLAHRARALEILKLPDSMMGSGFQPRVIAGDKPASIPTAALPVEGGS