LOCUS 1099451320118 3067252 bp DNA linear CON 31-OCT-2005 DEFINITION Loktanella vestfoldensis SKA53. ACCESSION VERSION KEYWORDS . SOURCE Loktanella vestfoldensis SKA53 ORGANISM Loktanella vestfoldensis SKA53 Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella. REFERENCE 1 (bases 1 to 3067252) AUTHORS Hagstrom,A., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C. TITLE Direct Submission JOURNAL Submitted (28-APR-2005) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..3067252 /organism="Loktanella vestfoldensis SKA53" /mol_type="genomic DNA" /strain="SKA53" /db_xref="taxon:314232" gene 356..429 /locus_tag="SKA53_t00542" tRNA 356..429 /locus_tag="SKA53_t00542" /product="tRNA-Met" gene 549..719 /locus_tag="SKA53_00005" CDS 549..719 /locus_tag="SKA53_00005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQRTLSFEITTEHVVFNTLASADLVIWISICLKALVYATTDGSG KRFDPAYATQPA" gene 896..1345 /locus_tag="SKA53_00010" CDS 896..1345 /locus_tag="SKA53_00010" /note="COG3019 Predicted metal-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12361" /translation="MKRRDFLITASSAAVLALPVRAAVAKMQVLKSPTCGCCSAWVAH IEDAGLVVETQDVSQEVLWAAKDKAGITPELSSCHTGFIDGYVIEGHVPAADIQRLLT ERPDAIGLTVPGMPIGSPGMEMDNRRDAFDTLLVLRDGSIVVFSSHT" gene complement(1391..1588) /locus_tag="SKA53_00015" CDS complement(1391..1588) /locus_tag="SKA53_00015" /note="COG2608 Copper chaperone" /codon_start=1 /transl_table=11 /product="Heavy metal transport/detoxification protein" /db_xref="CDD:12125" /translation="MNTFHIPDMSCGHCKTIVEKAIKGLDPEAQINFDMETRRIALGS VVDTAIVQAALAEAGYPATPI" gene complement(1610..3943) /locus_tag="SKA53_00020" CDS complement(1610..3943) /locus_tag="SKA53_00020" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="cation transporting P-type ATPase" /db_xref="CDD:11924" /translation="MDHDHPHAAPEMQAGAETAKDPVCGMTVAVKPDGRHAEFEGETF HFCSEKCQTKFKADPWHYASGRAAGVKKTAPAHAQYTCPMHPEIIRDAPGACPLCGMA LEPMLPSDEPSEELTDFTRRMWISAAAAVPLIVLTMGGLVGLPVRDWIGHQTASYLEF VLATPIVLWAAWPFFKRGWDSVVNRSPNMWTLISLGVSAAYLYSIFATFLPGLFPDQY RMGAGVGTYFEASVVIVALVFVGQVLELRARERTGDAIRALLDLAPKTARRILPDGTE YDAPLENIMEGDRLRVRPGDAVPVDATVIEGRSSLDESMLTGEAMPVEKGPGDAVTGA TINKNGALVIEAGKVGADTVLAQIVTMVSNARRSRAPIQGLADRVSAVFVPTVVGTAI FAFVVWMIFGPDPALVFAIASAVSVVIIACPCALGLATPISITTAAGRGAQAGVLIKD AEALERMASVDTLIVDKTGTLTMGKPTLTDKVTLGDVTKAELLSLAAALERGSEHPLA EAIVEGAEAAGAARQEATEFEAVTGKGVRGQIDGHAVTLGNTAMMQEIGLDTGAAEEK ADALRAEGKTAMFVAVDGALAGIVAVADPIKDSTAQAIKALHAQGLRVIMATGDNERT AKAVAERLGIDEVRAGVLPEDKKKLIDQLRKDGHKIAMAGDGVNDAPALAAADVGIAM GTGADVAMESAGITLLGGDLMGIVRARKLARATLRNIKQNLFFAFAYNSLGIPIAAGL LYPVTGLLLSPMIAAAAMSLSSVSVISNALRLRRVDL" gene complement(4598..5332) /locus_tag="SKA53_00025" CDS complement(4598..5332) /locus_tag="SKA53_00025" /note="COG3971 2-keto-4-pentenoate hydratase" /codon_start=1 /transl_table=11 /product="2-keto-4-pentenoate hydratase-like" /db_xref="CDD:13277" /translation="MKHLDAFADALIEAHQSGNRCAPDGPAPKTNAEAYYIQARVSAA LGPIAGFKAALKPGQEPIMSPIVPGFVFASGATVAIGDVMGVELEVGWKIVAPLPDQS ADDFEAKLCRSVRPVPVIELVNSRLRAPLAEDPIAKLADFQINHGLIIGATMGDWDGR DIGNIKARMQAGDNIMLDGPADVPGGSAFSTLKMLLAKIGTHCGGLQVGQIVITGSLH PLTYIDVPCEVHGQIDGLGAISVRLN" gene complement(5329..5949) /locus_tag="SKA53_00030" CDS complement(5329..5949) /locus_tag="SKA53_00030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13408" /translation="MNPNSNRATTREMAAIASTILPDVQGWTAPDGPGLLTSMTLLDA AAAHVAAAEIPDAVGGIIVCAFGDPGRAALAARLDIPVIGIGESAAIAAASGGRRYAV VTHTPGLVSGIDMLMRTAAPSGAYLGTFLTDGDPVILSADEDALDAALLAATHRAHSA GAQAVIIGGGPLGQSAERLRPLAPCDLIAPIPEAARRMLRIMEEWQ" gene complement(5979..6443) /locus_tag="SKA53_00035" CDS complement(5979..6443) /locus_tag="SKA53_00035" /note="COG0251 Putative translation initiation inhibitor, yjgF family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:28356" /translation="MSCPIEAQLGKLGLALPPSAPSRALFLPGKITGNLLFLSGQICE WEGVPKYFGPIGTGFDTAIGQQAAQMCALNLLFSIRAVAGSLTKVSQIVRVGGFVAAD PGYPDGPQIVNGASQLFIDLWGDAGRHARTAVNVASLPANALVEVEAVVELN" gene complement(6440..7618) /locus_tag="SKA53_00040" CDS complement(6440..7618) /locus_tag="SKA53_00040" /EC_number="3.5.1.4" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="amidase" /db_xref="CDD:15348" /translation="MLIDKDPFNCFMPYEAIRVAHAADGPLAGLTLAVKDIFDVAGYR TGSGCPTRLAQSPVARKTASAAQRLLDAGAQFVGKTHTDELAWSMYGMNAHFGTPVNP AAPDRIPGGSSSGSAVAVAGGLADIAIGSDTGGSVRAPASFCGIWGLRPTHGRVCLDG VQPLAPSYDAVGLFARDGATLARAADALLGPDTAALPPNPVLLRPTDMIAQLAAEQQA IYVSVFGALQAQDVEVFPQGVAAVYDIFLTTISGDAKAAIVPWIKASGMPLVRGIHGR VAAAEQLAEAQIADARKARANYAAKIVALLGDTGVLLAPVVPEAPFRLDAPIEVFDTY RHDAMRLLCVAGLVGLPQVTFPAGSIDGAPFGLSLIGPRGSDLSLIALANALAKGTTT " gene complement(7622..8602) /locus_tag="SKA53_00045" CDS complement(7622..8602) /locus_tag="SKA53_00045" /note="COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /codon_start=1 /transl_table=11 /product="putative oligopeptide ABC transporter, ATP-binding component" /db_xref="CDD:10318" /translation="MTENLVDIRNLNVRFSGARTVHAINDLTLTLKQGETMALLGESG SGKSVTLKTLLRLLPPKRSHIDGNIVVNGVDVLTLSGKKLQAYRGEEVSMVFQEPGLA LDPVYTVGDQIAESVMRHKGVRKDEALSTALDMLRRVRIPSPERRLHNYPHELSGGML QRVMIALALACRPRLLLADEPTTALDATVQIQILLLLRDLQKEFGMGVIFVTHDIGVA VEVSERIAVMYAGQIVEEGTTREIIKDPRHPYTRGLLAANLHDAARGARLNAIPGAPP PLDTRPDACSFAPRCPLAEPQCLAALPPVHSPNDRRRVACIHPNAPILAE" gene complement(8599..9651) /locus_tag="SKA53_00050" CDS complement(8599..9651) /locus_tag="SKA53_00050" /note="COG4608 ABC-type oligopeptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /db_xref="CDD:13764" /translation="MSKTETLADTQPDKGGPAQPLLIVRNLQKYFPVRGGIFGGKKAV VQAVDGVSFEVKKGETLGIVGESGCGKSTTARLLIGLLDKDKGEIIYDGQDLGGTLSL RELRRGVQMVFQDSYASLNPRLTIEASIAFGARIQGLSDPVGRARKLMERVGLAPDRF AQRYPHEVSGGQRQRINIARALAMSPRLVVLDEAVSALDKSVEAQVLNLLADLRREFG LTYIFISHDLNVVRYISDRILVMYLGEVVEIAPVDDIWTSQAHPYTRSLFSAMPSMDP DNRTKEPPLAGDPPNPINPPSGCRFHTRCRFSEDVCKAKVPLLHPLTAGSDHLAACHL HDISSGHSKAGKDVFE" gene complement(9638..10525) /locus_tag="SKA53_00055" CDS complement(9638..10525) /locus_tag="SKA53_00055" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10891" /translation="MALIETHGLEDPISEAGKGYWSGVGSRLIRDPVTMICLGVILLL ILSAVFAPYLGLADPYTGSMIKRLAPIGTEGHILGTDEQGRDMLARLIYGGRLTLFIG LMPVVLAFFIGGALGIVAGYLGGWVNTVIMRTVDVFFAFPSVLLAIAISGALGAGILN SLVSLTIVFIPPITRVAEAVTSGVRSLDYIDAARASGANALTVIRVHVIGNVLSPIFV YATSLTSVCMILAAGLSFLGIGVRPPEPEWGLMLNTLRSAIYINPWLSALPGLMIFIT SLCLNLLSDGVRSAMNVKD" gene complement(10530..11528) /locus_tag="SKA53_00060" CDS complement(10530..11528) /locus_tag="SKA53_00060" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10471" /translation="MHVMARDLIYLRTATVFTYFLRRVILMLPVAFGVSVICFMLVQI APGDPLTAIMPVDATADEQAAMRAIYGLDKPLPVQYAIWIGNLFQGDMGKSIATGRPV ADEVFGAVQNSLLLAFSAAVIAFPIGIFLGFLAGYFRDTLLDRAVTAISIAGVSVPNY WLGIVLVIIFSVNLGWLPSMGAGPGGSQDWAWDWLHMRHLVLPAVTLAVVPIGIVART VRALAGDLLTQDFVTALYAKGMSRGDVLRHVARNAAATALSVMGLQLGYLLGGSILIE TVFNWPGSGFLLSNAIFQRDLPLLQGTILVLALFFVAMNLIVDVAQAAIDPRIKRS" gene complement(11547..13145) /locus_tag="SKA53_00065" CDS complement(11547..13145) /locus_tag="SKA53_00065" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /db_xref="CDD:10615" /translation="MKHFKKGVATLLVAASLCAQGAWAQGTLRVGMTAADIPLTTGQT DQGGEGMRFMGYTVYDSLIEWDLTSADKPSALIPGLATAWSVDDADKTKWTFTLREGV TYHDGSPFTAADVVWNFDKLLDETSEQYDSRQAAQGKSRIPAVASYTAIDDYTLEIIT KTPDATLPYQLAWILISSPAQFEAVGKDWEAFAASPSGTGPWKLETFVPRERAELVPN TAYWDETRIPKLDKMVLIPLPEPNARAAALLSGQVDWIEAPAPDTIPAMTGNGFVISS NAYPHNWTWHLSRTEGSPWNDIRVRQAANLAVDREGMSALLGGLMIPAKGFLPPSSQW FGTPTFDVRYDPEAAKALLAEAGYSLENPLKVKALISPSGSGQMLPLPMNEYLQQNLA QVGIDVEFVVVEWNQMINLWRAGAEDPSVEGAMSINFTYFIQDPFTGLIRHLSCDLIA PNGTNWGHYCDPEMQGLFDQIKNTFDAEEQDAVMRATHEKYVNDALFLMVTHDVAPRA LAPNVKGFVQAQNWYQNFSSITME" gene complement(13424..14356) /locus_tag="SKA53_00070" CDS complement(13424..14356) /locus_tag="SKA53_00070" /note="COG0388 Predicted amidohydrolase" /codon_start=1 /transl_table=11 /product="N-carbamyl-D-amino acid amidohydrolase" /db_xref="CDD:10262" /translation="MSRVVRTAAAQMGPISRDETRASAAERMVALLDQAARQGANLVV FPELALTSFFPRWFMPDQADVDAFFETEMPNAATETLFARARALGIAFSFGYAEMCQH DGKLHRYNTAILVDGAGQIVDRYRKVHLPGHPEHEPWRPFQHLEKRYFDPSPFGFHAV DTLGGKIGQAICNDRRWPETYRELALAGAEMVLIGYNTPRHYPPAPKHDHLQDFHNHL SLQAGAYANGMWVIGVAKAGIEEGCDLIGGSAIVAPTGEIVVQAQTLGDEIIVADCDL DRCAEIRANIFDFAKHRRPEAYTRIAAKDAPAKG" gene complement(14449..15804) /locus_tag="SKA53_00075" CDS complement(14449..15804) /locus_tag="SKA53_00075" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="putative glutamyl-tRNA(Gln) amidotransferase subunit (EC 6.3.5.-)" /db_xref="CDD:15348" /translation="MSIWQTDVTALLAAYATGQVTPVQAVEAMLARIAMLNSTLNAYT AMNDLGLSEAVAATARWRAGAPNGPLDGVPLIIKDNLVTAGMPAAWGNAHLARQIATH DEAPIARLRAAGAIFLGKGNTPEFAIEGYTDNLTFGVTRNPFDPALTPGGSSGGVVAA VAAGLAFAGIGTDGGGSIRRPAGYTGLFGLKPGIGHVPRAGGLAQVLLDFEVVGPIAR SARDLTLLDTVLSGGPNKAPSERPLSILAIATLGDAPCDPTIRAAFTATCDRMSALGH AVVKGSMPLDIGQLNAVWTDIGAIGLAAYLEDHPEVRVSANPKYIAIAKTGAKKSGAD LYRILDLVFKLRHETAELFQQYDAILMPTAAANPWPAAEPFPDTIDGQSVGPRGHAIY TGWINAAGLPAVAFPAPTAGLPIGMQLIGPMGSESSIVAVAGACAAAFAWPAIAKDPN D" gene complement(15801..17102) /locus_tag="SKA53_00080" CDS complement(15801..17102) /locus_tag="SKA53_00080" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="putative membrane protein" /db_xref="CDD:11306" /translation="MTIADIAIGFSVMMGLLLIGFPVAIVMVAMGVVGGVLLYGPVLL ESMGPVLWGVQNENVLTAIPLFILLGELLLRSGIADRMYGTLAMWLGGLPGGLLHTNI GCCALFAATSGSSVATAATVGTVALPSLNERNYSSSRALGSLAAGGTLGILIPPSVNL LVYGSLANVSVGQLFIAGIIPGILLTLSFMILIALQHYWKPDDVSKPLQVSRAERIHA LRHLIPPAVVFAIIMGSIYMGIATPTESAALAVIAALVFVWREGRLSLSFLDVCFRQT AKTTGMILLIIAAAFTLNVTLALGGITNAMSSWVGGLGLTSTALLFALMLFYLILGMF MDVLSMQVLTIPVVVPIIIAAGIDPIWFGIFVVLMSELGMITPPVGMNLYVVQGVRSD KGPFMDVIVGALPYAAIMLLFATMLIFLPSIVMWLPSSLAR" gene complement(17099..17668) /locus_tag="SKA53_00085" CDS complement(17099..17668) /locus_tag="SKA53_00085" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13808" /translation="MEFIATWISRLFGWSLLFLSCFVALETVMRKVFNTSLQGADELG GYILAFGSSLAFVVTLAERAHIRIDVLHRKFPIFVQSLIDWLAALSMAVLGCFLLYVG WFVLKDTLAYGSTAATPWATPLIWPQTAWYGALAIFSISAIALSARATWLFFAGDHRT LAAEFNPKGAADELVDELQELAKRKGKLQ" gene complement(17727..18758) /locus_tag="SKA53_00090" CDS complement(17727..18758) /locus_tag="SKA53_00090" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding protein" /db_xref="CDD:11350" /translation="MKTTHIISTIALLSLAVPASAETTMRVMGQPAATGLIQNNVEGP FFADFAASTGLDITAEFQPADITGIKDTEQLRVLKSGLFDIISLRLSQVSRDEPTILG LDLVGLNPDYASGRETVAAFQSVVDARLQEQFNTKLLGVWPFGPQVLFCEPEISSLAD LSGLKVRVYDQNLANFISLVGGTPVPLSFGDVQQSLARGVVDCAITGPSSANSAGWPE VTSYMMPIAFQMAMNGYGMNLDTWNALSAEDQEKMQAAFDTLIEDIWTYSEELFVDAV QCNVGQQPCETGTLYDLTLVEVSDADKALISTAVTDVSFPAWKEICDATNPACSSSWL ETVGVAKGY" gene complement(18755..19537) /locus_tag="SKA53_00095" CDS complement(18755..19537) /locus_tag="SKA53_00095" /note="COG3473 Maleate cis-trans isomerase" /codon_start=1 /transl_table=11 /product="Asp/Glu racemase" /db_xref="CDD:12801" /translation="MTVFERQTGKRVGMLTPSSNTVLEPYTSAMFAPFGDAASAHFGR FRVVEISMSDASQGQFTDAPILEAARSLAEAKVDLIAWNGTSASWLGLEKDRALCAMI EAETGIKATSTSLAYDHLFRGMGLKSLGLVTPYLTEVQDLIVAQYASQGIAVSADARL EEKVNHAFGTYSADQIAGMIREVAKSKPQAISILCTNFRGAPQAAALEAETGIPILDS VSVTAAHCMREMGLDPARVNNWGSVFQLFSDLHYPSQQREKQ" gene complement(19534..20934) /locus_tag="SKA53_00100" CDS complement(19534..20934) /locus_tag="SKA53_00100" /EC_number="3.5.2.2" /note="COG0044 Dihydroorotase and related cyclic amidohydrolases" /codon_start=1 /transl_table=11 /product="dihydropyrimidinase" /db_xref="CDD:28175" /translation="MTYDLIIRGARVVTGAEVVECDIGIREGRINALGQDLGPADEVI DATGLIALPGGIDSHVHIAQPSGPGIEMADDFASATRSAACGGNTTVMPFCLPEDGVT LRQAVNDYHAKADGQCHVDVSFHLIIKDTDAQTLGQDLPALFAAGYTSFKVFMTYAGL ALSDREILDVMDVAKAHNAMVMVHAENEDAIEFLRDKAEASGNTGPVHHARTRPIPVE REATHRAISLAEIAGVPLTIVHVSNGAALEEITRARRRGLKVFAETCPQYITLTADDL DRAGFEGAKYVCSPPPRDSAEQAAIWAGLEQGDFDLFSSDHCPFRFADSAGKDAQGAR ATFRNIPNGIPGVETRLPILFSEGVMKGRITLPRFAAITATNHARLYGLAARKGAICV GADADIALWDPNLTKPIRQTDLHHGSDYTPWEGFEVTGWPVRTLLRGQTVAKDGEIVG AATGDYLSRSAPEFLI" gene complement(20931..21647) /locus_tag="SKA53_00105" CDS complement(20931..21647) /locus_tag="SKA53_00105" /note="COG4126 Hydantoin racemase" /codon_start=1 /transl_table=11 /product="putative hydantoin racemase (EC 5.1.99.-)" /db_xref="CDD:13408" /translation="MTDNMAAIARATVGDLAEIIPVTATRGFPYIASRAEAQIAGGIV LEMIAEHASTVDAVVIAAFGDPSLKGARDLFDLPIVGMAEAAVMTAALLGESFAVVTF SPLMTRWYDECVQATGLGNRFKGVLTPDITPARLTDVQTDLGADIITMATTAATRHHA DVIILGGAPLAGLAPKIASQVPAIVIDPIAAAVLQAMTLVRMTAHAATPLRVNKPAAK TSIGLAAPLAMAIHHGGAAS" gene complement(21763..22644) /locus_tag="SKA53_00110" CDS complement(21763..22644) /locus_tag="SKA53_00110" /note="COG0726 Predicted xylanase/chitin deacetylase" /codon_start=1 /transl_table=11 /product="putative polysaccharide deacetylase" /db_xref="CDD:25772" /translation="MTERRDFKGYFGAEPPPNWPQGARLAVSLVVNVEEGAELSIADG DERNENTYEIREEVVGYPDPCMETHFTYGTRQGYARIAKAFETYGAKATFSSCGRAAE RSPWLLQDVVSRGHEVSCHGWRWERQAEMARADEAAMIARTHAAIETACGVAPVGWHT RSAPSVNTRDLLLEHGGFAYDSDVYDDDIPRMHDATHVILPYAFDTNDMRFSPGGGFV QHSDFSNYVIGAFDRLYAEGAGAVRIMSIGLHLRLIGRPGRIKGLEDVLAHITGKPDV WIAPRREIAAHWKVHAQ" gene complement(22641..23441) /locus_tag="SKA53_00115" CDS complement(22641..23441) /locus_tag="SKA53_00115" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10895" /translation="MTQTDRITIFFAWAVGIGCIIFLMLPIVITVATSFTSSSVYTLP PPEWSLRWYRSLERRSGLWEAVQLSLNLAFISTAISMVLGTMAAIAVARGEFRGKQAI ATFTVSPLMMPGLVVGVAMLQFFREIGLRDAYWSLLLAHVVITLPFVMRTLLASMGAF DFSLIDAARTLGMSYPRAILKVLIPNLAPAYLTGGLFAFLASMDNYPISIFLTDARNK TLPIKMLQYLEEQPDPSLAAMSSGLILMAIIVLVVASRTVGLNRMIET" gene complement(23438..24268) /locus_tag="SKA53_00120" CDS complement(23438..24268) /locus_tag="SKA53_00120" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10894" /translation="MIARSNRIALLAVPGLAFLAIIYALPLVMLLFKSIQGAEGLTLV TYIDFFRDEFNQTVLWRTLRVALLTTLLALVIAYPTAFAMARAKGIWLTVFMVALVLP MSLGVIVKAFAWSILFRSNGFLNTTLQAIGMTDGPVRMLFTETALIVGAANVFLPFMV LPIYSVLRQLNSSLPEAASSLGATPWFRFTRVTLPLSLPGVVAGSAFTFSLAISMYVI PSLIVGERQQTLSMLIARSFLYLRNEPLGSTISAVLLAIAIFVVLFSSWLAGRLGARQ " gene complement(24265..25359) /locus_tag="SKA53_00125" CDS complement(24265..25359) /locus_tag="SKA53_00125" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, ATP-binding protein" /db_xref="CDD:13158" /translation="MFAQATEQRPPAHRYLDVVGAAKSFKGTVVMDNMNFRVAKGELV SLLGPSGCGKTTLLRIIAGLLEADTGDIILGGRNVSSLPAHKRNISVVFQNYALFPHL TVAENVAFGLRARGMSKSDVKAPVAEALALVRMDTFADRPVSALSGGQQQRVAVARAL VVSPDLLLLDEPFSALDRKLRETMQIELKALLRSRGITAIFVTHDQEEAMGVSDRIAV MNSGRIEQFADPSTLYAQPASPFVMDFVGLSTRLTGHVIAQADGIATVKTHVGKVRAN SQLVVGTPVQVGVRPELITPDPSTEMNQIKVQLDDVMTLGSKTVLHGVTTGADKFLCE LPGIRTGYARGETVTWGWAVADTLIHEVPA" gene complement(25364..26359) /locus_tag="SKA53_00130" CDS complement(25364..26359) /locus_tag="SKA53_00130" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /db_xref="CDD:10556" /translation="MAAVGTFAAPSILRAQSSELVIGCAGSHTAWMEALVTPHMKASI GADIIFEGTKSSVNLEKMSSNKDAPYLSVVQMDDPVMIQAVEADLLVPITPDAVPNMT DLRPDATHMDGMWCNYVQPWAGVAYNTNMTNGVSSWAALWDPANAGRVVIPSLQNTEG MWTLMSAAMLGSGLPFVDAQYEIDAAFAKLEELKPNLLTVYSTMSQAFNLLEQGEISM LSGNFSSYTLPRKAEGVPVDLAAPAEGIFAMPSGICLVKGGPNPELAQAYVNEMLGPV MQAAIADFASSVPANTTVTAGAIIPDGVPIYSPDWSFVAANRAAWIDRFDKLMAI" gene 26610..27917 /locus_tag="SKA53_00135" CDS 26610..27917 /locus_tag="SKA53_00135" /note="COG0402 Cytosine deaminase and related metal-dependent hydrolases" /codon_start=1 /transl_table=11 /product="N-ethylammeline chlorohydrolase" /db_xref="CDD:28159" /translation="MACHLYNVALLCPTEGFVSNGSLTIRDGIIAARGAAPNPGETVI DGKGAMCLPGLINTHNHSPLMSVRGMVEDLGFAPAYTPGVPQGHWLSSEETQILARLG VMEMLCAGATTIVDYYRMPDALARAAEAFGLRAMIGGRVMDADTASLANGRFLHDPKL GEATLRAALDLIDTWDAKGNDRISTILAPHAPDTCSRQMLHTFADLSAKTGKQVHTHL AQSKMEVAQVRSREGLSPAELLEDVGLLSPDLVAAHCIFLDEADIRRIGKAGVVINHA PIGNAAFGAAAPVIALREAGAKITLCTDTKSADMFEAMRMAIAAARWRADMEFVLDAK TVFGWGTVDAARALKGHAASGTLSVGSPADLILLDPNAPNLRPVIDGYGIVVHSGSAA NVTDVMVAGEWLVKDRMPTRVDMDTVIRDAQKVAENLWKRASA" gene complement(27909..28595) /locus_tag="SKA53_00140" CDS complement(27909..28595) /locus_tag="SKA53_00140" /note="COG1802 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator, GntR family protein" /db_xref="CDD:11512" /translation="MDTPPPRSAPNGDVTAVAQWVADILRDRIIRGVLPAGARIVERK LSAELDVSRTPIREALKLLHADNLIDISRHKGAQVTEFLAQEALELFDVIASLESLAA ERLAERITKEQLATFEDLHAAMLTHYQAGEADAYFDLNSEIHDAILAACGNIILQNLH TKMMARARRGRFMAIMNPDRLKSAVEEHEQLMAALRTQNADAARQIWRKHLLNTGQSV TDVLRSQALG" gene 28861..28986 /locus_tag="SKA53_00145" CDS 28861..28986 /locus_tag="SKA53_00145" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSATDQTTLAVTVITANETEKCDETPARPEKACQKNEAAAL" gene complement(29023..29856) /locus_tag="SKA53_00150" CDS complement(29023..29856) /locus_tag="SKA53_00150" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="Spermidine/putrescine-binding periplasmic protein" /db_xref="CDD:10556" /translation="MRVVPDPARATGTGIVALDGAKAAIAQAVLAGWDIIALDEASEI AACGAGVLQKAPTSETTTADISTRFARRPGQGGAKSGCALTYDTRFEALAYRLDAFVL SPPSTGLAVFDTASFPGPRAVVWPPRALLEWAILAQGVPEVQVYDILSSARGMQIARA AILDIAPSIIWVDSDAEAAQLLATGQVTMAVAGEADLAVTAGIAAVVQAGKIGQRRSW IQLPSGAASSPTLRPADGIVAALAGDQSTYVPALWRDAAWYAQAGAHVATGLAGLGPE K" gene complement(30020..31780) /locus_tag="SKA53_00155" CDS complement(30020..31780) /locus_tag="SKA53_00155" /note="COG0038 Chloride channel protein EriC" /codon_start=1 /transl_table=11 /product="putative transport integral membrane protein" /db_xref="CDD:9913" /translation="MAHVPDTPSSVLGVTPFMMVRRIVTVLTVGLVIGAVTAIAAIAF VEAVLWLNDLLLVSSYAKVQSGLSPTVLLAITLGVPMCGGALVSFIVFRLAPIHRPAG PADAIRAVQLQTSMPDTRSGLLVTLGALGSLGVGASVGQYGPMVFFGAVIGGLVEKLK LAVPNINAIAIACGVAAAISAAFNAPIAGLVFAHEAILRHYSMQAFAPVTIASTVGYV VANVLFERAPVFVVQTGVSLHVPEFAIFALMGLLSGVVSIVYMRTLLAGARIGGRIAL PPEARGAMAGLAVGLCALWLPEITGLGQYTLRFATIQGAFGASEMAMILVGKIVLTAI CLGMGFVGGVFSPALIVGSMLGGLVWTGLTALGMEGLAAFPVYVICAMMAVTSPVIGA PLTAILIVFELTRSYELAIASMVVVVFSNVVAFRFFGRSLFDMQLFLRGCDLSQGRAE AQLSVLAVRDYAVVEAPIFDVSLGQDAVRAELDAHGWSEGYAIDANGLFRGYLRIVDL GEGSPAPVSDILRPAQLMFDADTSVRDAMRLLKDFVGDAIPIVDRDSQHLVGVVTEAA IVRAYLDIVAKLRNEENAGL" gene 32161..32352 /locus_tag="SKA53_00160" CDS 32161..32352 /locus_tag="SKA53_00160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKNTNLSGFTTAQAKSETTMDKTTRAVKQIKDAETKHREDKMA RLRKARHESEAEALGKPIA" gene 32749..33225 /locus_tag="SKA53_00165" CDS 32749..33225 /locus_tag="SKA53_00165" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSSIQNDPSKQSVIREIAYVRAMGAVDHTLRASANLGVYEFILL LLEQGEPGLPLYATLDRVKSRYTTRSGMIKRIAELRKQGLLIERKGKKQSEVLLQPSQ ELVDQLLPILGIRGDAQRVNYSGVTLCQIPDESKEMRISTILSADTKSSLTLLRQA" gene 33235..33600 /locus_tag="SKA53_00170" CDS 33235..33600 /locus_tag="SKA53_00170" /note="COG2188 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKSPIEKELERLRYLAATKSLKVFIKYPEYWELMLLIAINENNQ EIGIEDYLDNIATMQVNRVTVRNFIKDRVAEGTIISRQGEKKSRRMLTLSDKVTEELK DYFQYFHIKINQFAPRDEK" gene 33663..35033 /locus_tag="SKA53_00175" CDS 33663..35033 /locus_tag="SKA53_00175" /note="COG1538 Outer membrane protein" /codon_start=1 /transl_table=11 /product="agglutination protein" /db_xref="CDD:11252" /translation="MHFCSHRLNLLNALAISTALASCGQSPDDIATMRVVIDEQILLD SQDVEATAAAPLPFAQFEAALLLAVSQNELYRAALAAEIAAKAQVEVASSGTRPQISS SLNAGLIQDASSNNGDVEKGAIAGVNLSQLIYDGGETTANINRANAEVLIAEADRMVR GNDVASRASQAWVDVWKHQSRAELLASRLTKLNELVGQIERMAANGMVDRSVVDSATR ERLEFEMVDLNIQADLQDAELRFERLFNTSPARLRLPENVLTATDIMAAASAPRQAPE LQLSAAELIVARSAVARAEAGFEPRIRLQAGLRSPVDQQDDANGSLGVVVEYVIGDGG RRQSQLESATAQMQRSEAQFTASKQAFETELNISVARLDAIERSLPVVTQREALAAER IETLQSQLATGQTGLSQLIDAEIELYRVRDQLVTMRAEREILFLTTGARLGLLARQIG LLDADS" gene 35113..37317 /locus_tag="SKA53_00180" CDS 35113..37317 /locus_tag="SKA53_00180" /note="COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain" /codon_start=1 /transl_table=11 /product="ATPase" /db_xref="CDD:11980" /translation="MQGFQSNQQETEDADQADHQVESRANGADTPDVAGAPDVETAQS FDEMSLILAVKFILAKTGFSFSTAAVRDLAELSSDVFGPRAAVSAFQHLNFEANFGEM PVTALKQNHCPAIGFTHGDQAVVITSVEKDGAIEIVRFNKDMSQTVERVQKSDRAGLL QPHFVLCRKMHVSVKPKGKNDWFFGSFLQGKWLYGQVIIAAALTNFLGLSTSLFIMVV YDRVVPNQAIESLIALTIGVMLALGFDFIIKTLRSQFVDRAGKRADSRMLRLIFDKIL NMKLDHRKQKAGAMASIVREFDTLREFFTSATLIAVVDIPFIFFFIWIISLIAGPLAI VPLIAVPLVILSGLVIQPFLALNTKNAMQSNMSKQSVLVETLNGLETVQATGSGRLMR RRFEEAADAQSELGLKSRMLSQFAINSAASIQQFAQIATIFYGVFLIQDGVITMGAMI AAVILGGRTLAPLSQLAAAMSRANGALEAYRSLSSVMASSKDDPDDTVQRLSRPKMSG SVELRDVSYSFPGSNNPIIKNLSLKIEAGEKVAIVGRMGSGKSTVSRLISGLIVPSEG AVLIDGVDVRQIDKSDLRRNLGIMLQDTWLFSGTIKENLQMGFYEYDDAHILEIAKIS GVDDFVASDPRGYEMELKERGEGLSGGQRQSINLARALLHDPAVVVLDEPTSSMDTVT EKGVVERLKRWSGDRTVIMVTHRNSLLELADRVLVVDRGSIVADTTPDRIRS" gene 37337..38647 /locus_tag="SKA53_00185" CDS 37337..38647 /locus_tag="SKA53_00185" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="Type I secretion membrane fusion protein, HlyD" /db_xref="CDD:25537" /translation="MSSINFKALSRDMAGREGLSGSTILATIVVLVVSIGIWANWAEI DNVTRGEGRVISSVQNQLVQAAEGGVILRRFVSENTIVAADEILFEIDPIDSSSELNR LNQRLTGLDVKESRLRAEIEGSEFDPPNHVSAMSPLVTLTEQSLFAARRAELAGRIAV LEQRLQQRSQDLVAAENVSGTAERTVALLQEEIELVEPLVRDNIVPATRLLELRRQME QARGDGERAAVSIAQAGSGMAELEAEIANARDNYTLRAMDELNDVVAEQSELREALPK LEERVSRTIIRAPMEGIVSRLNFRTPGGFVATGDVMLELVPTGEALVVEARIMPQDIS RIRLDDDVRIRLSAYDSSKYGSVAGRVIEISPDAVADEQNPNAASSYLVEVAIEGELR VDSGEIVTLIPGMTATVDVLSGKRTVLEYIWQPVAKIQELALRD" gene 38898..41396 /locus_tag="SKA53_00190" CDS 38898..41396 /locus_tag="SKA53_00190" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNKIVSTDFITDDVQRLVPVDATATTPKNAAVAKLMKAWEAKTT QRTAKGAGLTLMALSLAACNDDNTTAAAPTTPTTPTTPVTPAGQTFTLTPLVDIASDT TALTGSAASTFRFTGADEVVNGMTATMAATDTLLDGSTTDNDVLNVTLTGATTITTMN IETINLSYVVAAADFTGANTGTTTYNVSGAVAGVLSTPASAATIALNDYDRVLTVEGL TLTGTTAAGSAESMSIALSGASYGTTAATQTGVTIDGTDGEQLETLNIASNGSSANSF ALAFQSTETVGTYTITGAQDLTMRVADAKVSGTTINATGNTGTVAISLDTGSGITVSA ANWTGVDNIVLRDSDTTAGAATLNSTASGQNVVVANSVSTLTVAATGATYTAPAAAAS LELNGTSTTSGVTVTTYAVQNATALNLSSLGLASSTSTTAANTISNLDGDFTRINITG DTSLAITDLDIEATETATTATTARAVVLDASAMTGNAFVNITASADSKVSYSITGTAG ADTIVMNQSGGTVISGAGNDTVTSGNGADTVSLGAGTDTYNVSFGVDTLTLGAGNDTV DIDAATASAVAQVSTVVNSTATYTHVGTVSDTISVTINGTVYSTTIGAAGGTADIAAA SSLSQFITEHATDILTAHGISVTNVVASTATDDIIATGKADGTAFTISARTVDASNSN AQADLTITATTEGSAAKDVATTITDFVAGDIINTVGLTALGTGGYVEGLANVSNVTEH GVIVITDASYASVAAAEDALQTKTAATTGDVTTTTAGIVVFLNSTTGTAQAFLDNDID SDGTLADSTVVFTFSNITNLTDLASIMSADSFVI" gene 41547..42428 /locus_tag="SKA53_00195" CDS 41547..42428 /locus_tag="SKA53_00195" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MPRYELITKTGFAAQAWRRVDSYAFAATDAVAPLVVQELAKACM SLPIAFIQQNDAFVPHAVQGLEPGRNLFVVNGTWVTPYTPAVYRGYPFGLAQGDGDDL HLCIDMDSGLVGAGEGFDQPFFDEAGEAAQPVKDALNFLQQIHRNRAVTQRVCAALAA EDLFQPWPLTVQSPDGERRVDGLFRIDEARLNSLDPDALARVQKAGGLAVAYCQLLSM GNIQTLGLIQRKLAEVKTRMPEMSDQIDVDGILQRHKSSEPEQTLEPVSNDNVVNIAS DEGDFDLSAFVKAKQDD" gene 42500..42703 /locus_tag="SKA53_00200" CDS 42500..42703 /locus_tag="SKA53_00200" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDTKAATITIDDKAYELTDLTEAARAHIANIQFVDAQIRQLNN EWAVCDTARMAYEAAFKRELAKT" gene 42754..42951 /locus_tag="SKA53_00205" CDS 42754..42951 /locus_tag="SKA53_00205" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPKISVDGTEYDTENLSVNGKAQLASLQFLEVQMQKLKNEIAVY QTARAGYAAALNNELAKIEAA" gene 42956..43237 /locus_tag="SKA53_00210" CDS 42956..43237 /locus_tag="SKA53_00210" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILAVGMIGAAAMLSAYSPMAVAQTQPAPDTNTVLNTG TDALLTMPLLADKGWFVHAYGGRVRACTADGASVAGERPAPKCSQWSEY" gene 44603..44956 /locus_tag="SKA53_00215" CDS 44603..44956 /locus_tag="SKA53_00215" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNDKFLECGRLWQLGPDWRGQRCGAKTRAGTPCKNPAVTGKARC RMHGGKSTGAKTAEGRAKLSALHLKHGRSTTAAKAEAKRRAQVGREIRAELRDIEREA IAGGWLAKTWKDQFE" gene complement(45158..46273) /locus_tag="SKA53_00220" CDS complement(45158..46273) /locus_tag="SKA53_00220" /note="COG1066 Predicted ATP-dependent serine protease" /codon_start=1 /transl_table=11 /product="RecA-family ATPase" /db_xref="CDD:27817" /translation="MTENSQLQELLAQAMPNQAPPPRNLFPFVVSATELMKRDMPPKQ MLLSTFMPRSSFGMVVAPRGIGKSWFSLALGVAISTGQGVFLGWKIHQQTRVLYVDGE MQTIDIRDRIKALSGGQELDSLDILPSEELYQEGRPVCLDDRTEQSQIEAMLNALEAE GRRPGLIILDNLSTLRRGVDENSNTETQSLVDFLVKLRHSTYAVLVVHHTNKAGKQRG ASIIEVPMDYVIELKKPEGGAIFHQGANFELSFSKIRGRAPENANFVAVLDEDADGKL AFSVDHAAFEVSDDIMVLRVVAESQKIPTQRAIAAKVGCSAGKANKVIQKLAKDGMIE KDARGTRLTDYGRYALHEAFPDRYDPPPNPERFQIPF" gene complement(46270..47052) /locus_tag="SKA53_00225" CDS complement(46270..47052) /locus_tag="SKA53_00225" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSDMTPLEVALMVAGTTGYRVFPSNQQKKPCVKDPFGRATNDKA GIEELFGNFPNAMTAIPTGPINGVTVVDLDVKGGVNGIETLRGLIDDLPPTMLVRTPS GGIHLYFRTGSEGLPSSVGKLGPGIDIRGSGANAISFGSTSQKGMYRWDHSVSGFTWR PAPMPADLKRLIYAATPSSGTQTTNGYTRSDVGERLTTPIVTGQRNSELASRIGYLLK VYSPQEVHDLAHHMNKTLMTEPLILKEVDEVFCSILKRELRK" gene complement(47049..47636) /locus_tag="SKA53_00230" CDS complement(47049..47636) /locus_tag="SKA53_00230" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMSKQTKAALIAAAQQAYDWSGAFPAACLPGVAPLSQGAPAQSE AQMVRDFKRHKKGLVGLRSSSKGLAILLRNVPVGVDRPSELARRFFDPDRYLVTRTKT VDLAAGRITLIDTVVIKSPFGFPLGMRTKDPSIVLVPDDSWALFSTAGETVIGFQRAS LAMSLQQLNGGTFTNRDIMELSPDDWATLLGRDAA" gene 47635..47823 /locus_tag="SKA53_00235" CDS 47635..47823 /locus_tag="SKA53_00235" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKTSDIGAPFLVGREPCFEITLAPADDAFADGDTRRHAALTVQI ADMPRAAAQKFGYLIDAK" gene complement(48343..48666) /locus_tag="SKA53_00240" CDS complement(48343..48666) /locus_tag="SKA53_00240" /note="COG2944 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family" /db_xref="CDD:12292" /translation="MGVYKTDGAAPAGRIDVSRVDATTEAEIKRHMLEDDLAALADAG DYARQIRRRLGLTQVQLATKLDVPIDTLRNWEQGKRYPTGPAKALLKILDRAPEAALA ALNGA" gene complement(48647..48922) /locus_tag="SKA53_00245" CDS complement(48647..48922) /locus_tag="SKA53_00245" /note="COG2929 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12278" /translation="MEFEWDDDKSEACLRQRGFDFAYATQVFFDPGRTVLPDDRMIYG EVRYQVYGTVTGRLFVVVFTQRGGRFRIISARKANQREVKRYGRLQN" gene complement(49080..50285) /locus_tag="SKA53_00250" CDS complement(49080..50285) /locus_tag="SKA53_00250" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Phage integrase" /db_xref="CDD:27722" /translation="MPAVELTSTLVATVVCPDSKRKEVFFDRRAKGLALEVRISGGRT YYLRYSDDRSKTRYIKLADAGDVTLPQARTLCERMRNKIAMGVDPLKERAGKKLVPTF EAFAWNSYMPFSQANKRSWKTDETLIRTHLIPAFGKKHLDEITTEDVLSMQQAGLKAG AAPGSVNRRLILLRYMFNTAWRDWKIAGVKENPTHGVRLLKENNKKERYVRADEMARL YAEICSSQNTMLKHVVAFLLLTGARRNEVLHATWQDINLTTGKWRIPDTKSGYARHLP LNDGAMAVLHQMQGVSRSQYIFGNPKTGKPYVHIYYAWDTARRRAGLPDVRMHDLRHT FASLLINNGRSIYEVQKLLGHTQIKTTQRYAHLTQETLLDASNIGTAAMAATLGMGSH GDVIEGRLC" gene 50343..50636 /locus_tag="SKA53_00255" CDS 50343..50636 /locus_tag="SKA53_00255" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:16530" /translation="MSSRTDEMKISIVLRAARSGLGISQADLASELGVSQSTITRCER GAGSFPANILLRAISFFRAHDIDITGVLEDNPTVVFRSQMFETLEKNRETSPD" gene 50923..52983 /locus_tag="SKA53_00260" CDS 50923..52983 /locus_tag="SKA53_00260" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSATLSGGLATSTITNVENLVLTDLAAGEVVFSTSSATYISGVQ SVKYVQSAGDITLTRIVDAASVTLENVVDDVTITFADTVLAGTNDTFTLNVSGFVLAG GDGFENIDVGSVSDTDGDIETLVINATGAASDFNDLDSAFVEVSTVTVTGSASVDFGA TAAFTSLATFNSSASTGGMTLLLGADGVSGTTNAKTLTFGAGADALDLGVLAPADIGV LTVDMGAGADTVDLDDYADTTMIISGGEGTDTLVSAAVITAANATTISGFETFELGAN AGTQVMSDLATGNTFTTLTAGAATTTFTNVGAAVTTFNLKGGVATTAATLTKLIDGSA DSLTVKATTADAGLTGDLSIDEIETVTFDSSAFNLVVAGDITSTDLTSVTLVGTNLIT LGANGTKEFSSTKIATLNATGVTGTEAVNVFAINNTVAMTVTGPASTGTFTLDTGSGA DIITAGSGILDVDAGAGDDTITGGALADVLEGEAGNDTITGGEGADYIGGGAGVDTIT LTETTVLADEVELSVGAANYDNIIGFDFGGTATDDNLSALDATFAWLGVGAATNNDGA VALSTGASIKAAEVADDNATVLTISTNVAGGTFAAFMAGTMTEATMEANVITALGLTG AMSTTDVIMVLVDDGTHTGVFKFTGADAATDDAVDAAEIEIMAVLNGVSDATSILAAD VLFA" gene 53212..54093 /locus_tag="SKA53_00265" CDS 53212..54093 /locus_tag="SKA53_00265" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MPRYEHITKNGFAAQAWRRHNSYAFAGTDAVTPLVVQELAKACM SLPIAFIQQNDAFIPHAVQGLEPGRNLFVVNGKWVAPYTPAVYRGYPFALAQGDDDQL HLCIDMDSGLVGAGEGFDQPFFDDAGEAAQPVKDVLNFLQQIYRNRAVTQRVCAALAA EDLFQPWPLKVQTPKGERRIDGLFRIDEARLNSLDPAALARVQKAGGLPVAYCQLLSM GNIQTLGLIARKLEELKTRMPEMTDQIDVDGILQRHKSSEPEQTLAPVENDNVVNIAA DTGDFDLSAFVNPKQND" gene 54165..54368 /locus_tag="SKA53_00270" CDS 54165..54368 /locus_tag="SKA53_00270" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDTKDAKITIDEQEYAVADLTEAARANIANIQFVDAQIQQLNN EWAVCDTARMAYEAAFKRELAKA" gene 54422..54619 /locus_tag="SKA53_00275" CDS 54422..54619 /locus_tag="SKA53_00275" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPKITVDGIDYDTENLSVNGKAQLASLQFLEVQMQKLKNEIAVY QTARAGYAAALQNELAKIEAK" gene 54624..54884 /locus_tag="SKA53_00280" CDS 54624..54884 /locus_tag="SKA53_00280" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILAVGMIGAAAMLSAYSPMAIAQTQPAPNSGTDALLT MPLLQDKGWFIHAHGGRVRACTADGASVAGDRPAPKCSEWST" gene complement(55120..56457) /locus_tag="SKA53_00285" CDS complement(55120..56457) /locus_tag="SKA53_00285" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Phage integrase" /db_xref="CDD:27722" /translation="MPVIDLTAQFVASAVCPSTKRKEVFFDRRVKGLVLEVRTSGGMT YYMRYTDDRSKTRYIKLANVGDITLPQARGLCRQHRNKLALGIDPLAERAVKRLVPTF GDFVRERYLPFAQANKRSWKTDETLARTHLTPQLGTMHMDEITIEDVLSLQQIGLKAG AAPASINRRLILLRYMFNLAWRDWKIAGVTGNPTHGVRLLKENNQKERYVRAEELALL YRAVKESQNKMLQHIVAFLLLTGTRRNEVLHATWEDVDLIKGMWRIPQTKSGFARHVP LNDGAYAVLQQMQGRSQSHYIFGNPKTGKPYVHVWYAWNSARVKAGLPDVRLHDLRHT FASLLINNGRSIYEVQKLLGHTQIKTTQRYAHLTQETLLDASNIGTAAVAATLGMVPQ RNVIEGDIYDAVELAPDRQAGNRRRAAISTGSEMPNAAIGQVLDPGSQMHPAG" gene complement(56653..56820) /locus_tag="SKA53_00290" CDS complement(56653..56820) /locus_tag="SKA53_00290" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILAVGMIEAAAMLSTYSPMAFAQTQPAPNSGTDAPLI MPLFTPKAANH" gene complement(56825..57022) /locus_tag="SKA53_00295" CDS complement(56825..57022) /locus_tag="SKA53_00295" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVKITLDGIKYDTESLSVNGKAQLASIQFLHVQMQHLKNEISAY QTARFGYATALKAELAKVEAK" gene complement(57070..57273) /locus_tag="SKA53_00300" CDS complement(57070..57273) /locus_tag="SKA53_00300" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIDTKDAKITIDDKQYMIADLSEAARAHIANIQFVDAQIQQLNN EWAVCDTARMAYTAAFSREMQNA" gene complement(57342..58223) /locus_tag="SKA53_00305" CDS complement(57342..58223) /locus_tag="SKA53_00305" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MPRYELITKSGFAAQAWRRHNSYAFAATDAVAPLVVTELAKACM CLPIAFMKQNDTFVPHAVQGLEPGRNLFVVNGTWVASYTPAAYRGYPFALAQGEVDQL HLCIDMDSGLVGAGEGFDQPFFDEAGEAAQPVKDALNFLQQIYRNRAVTQRVCAALAA EDLFQPWPLTVQGPDGERRVDGLFRIDEARLNSLDPEALARVQKAGGLPVAYCQLLSM GNIQTLGLIARKLDEVKNRMPEMSDQIDVDGILQRHKANDNLDSLETDNDRNLVNVVA DEGDFDLSSFVNSKHRD" gene complement(58452..60353) /locus_tag="SKA53_00310" CDS complement(58452..60353) /locus_tag="SKA53_00310" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="S-layer protein RsaA" /translation="MSLTAGLDTIVGGAGDDTVSGLVDAQTPASSTLNAADNINGAAG SDTLKITTQGTTAITDATNGAAITNVETVEIRAVSTAGVTLSGANLPGVTLINNNLST DALTLTNLADTTAIQVTGNGVATNGATTATYVAAATSGELTITGGVTAGAIAVDGTGL TSLSITSSGAANTTGAISTTGTPTAVTINASTALTTTGLTVGANAAAQTLTITGAGTV TLGTLDADFATVTASANTGGVVATLSTLVTGATTGSAGNDTFTTAAVLTTGSVNAGAG TDTLVVAASAQLASATLGAKYTNFETLNVADGVSVDLDNIAGITAVGITAGGAATGVT DLTATQAAAVTMIAGNATTTIGVKGATTVGQIDTVKITYSDGDSTLNEDINGAASNLT LAGVENLEVTSVDAAEIVQSAATSGSLTSVKLFGAGNHSFTTGNMATSNFTLDASGST GTNTLSAATFATNGVAITGGSGADTITGSGQADVIIGGAGNDTITGGDGTDTVTGGAG ADTFAFAAGDNAGADGAAVADIITDFVAGTDKLQFGNTDIVSAQQSAVQAAVTALAAG STDAQIATAMVAANTTVEGVSFAVFNGNTYVYVETTADALTHVEANGIFIQLTGVTTL PLFATDVIA" gene complement(60445..60699) /locus_tag="SKA53_00315" CDS complement(60445..60699) /locus_tag="SKA53_00315" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGISKSKLARAETAAGSISSGDLEYALSVFRSAGVMIDLTIEGD LRLTVPDNKLHLIEAAITAGMGADGSFDEVASDPKTSNPK" gene 60860..62065 /locus_tag="SKA53_00320" CDS 60860..62065 /locus_tag="SKA53_00320" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Phage integrase" /db_xref="CDD:27722" /translation="MPKARLDSQFVSHADCPEGKRKQTYFDTSTRGLCLEVRISGGRT YYLRYSDDRSKTRYIKLADAGDVTLPQARTLCERMRNKIAMGVDPLKERAGKKLVPTF EAFAWNSYMPFSQANKRSWKTDETLIRTHLIPTFGKKHLDEITTEDVLNMQQAGLKAG AAPGSVNRRLILLRYMFNTAWRDWKIAGVKENPTHGVRLLKENNKKERYVRADEMARL YAEICSSQNTMLKHIVAFLVLTGARRNEVLHATWHDINMTTGKWRIPDTKSGYARHLP LNDGAMAVLHQMRGVSRSHFIFGNPKTGKAYVHIWYAWNTARKKAGLPDVRMHDLRHT FASLLINNGRSIYEVQKLLGHTQIKTTQRYAHLTQETLLDASNIGTAAMAATLGMGPH GDVIEGRLC" gene complement(62141..62527) /locus_tag="SKA53_00325" CDS complement(62141..62527) /locus_tag="SKA53_00325" /note="COG3744 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13064" /translation="MKLLLDTHILLWAAYTPDRLSAKAQAMIADTGNSLYFSVASLWE VAIKASLGRDDFRVDVAELRLGLVANDYAELAIESAHVLRVPTLPPIHADPFDRILVA QAMAEGFVLVSNDAKLKAYGGPVWDV" gene complement(62524..62763) /locus_tag="SKA53_00330" CDS complement(62524..62763) /locus_tag="SKA53_00330" /note="COG4118 Antitoxin of toxin-antitoxin stability system" /codon_start=1 /transl_table=11 /product="Prevent-host-death protein" /db_xref="CDD:13400" /translation="MKTINIHEAKTHLSKLVEAAAKGEAFVIAKSGRPMVKVTMLEGQ LQKRLGFLAGKGTVPVDFDEMSADEIAQMFAGTEA" gene 62888..63523 /locus_tag="SKA53_00335" CDS 62888..63523 /locus_tag="SKA53_00335" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDLKMPKKVSPLNKRKGFVGIDPDQSLNEILELISDRPCPAVCS KFYPDRGHFYMLHRWLACLLLEEGLHERKATPELELAQEHLCHALLCLANNKQADYLS PDRKSGPRHHDDNVREATLCAAARFNYAQLIGLHKGVERWWATIVRKSDPLYKLPTNL GKLIGNVEQGNSIADKSTLLSFYACFIDATPNEAEQHSLLLKEHVERILLP" gene 63779..64693 /locus_tag="SKA53_00340" CDS 63779..64693 /locus_tag="SKA53_00340" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAHRADGGTVMEFEINMQLLSTPADLSLRDKKALAAASWVRMGI DIILVEHGIPIKDTRSRAERMSPVDTYFYVLEQPEQINIALRTGPKTGLVALSVYTDA PGVGLHTLEERGFFCPQDDPLIRHETITRGQSQGRFHTVLFYSGKDQFLETGLDDLPG VYVRSSGELILLPPHELNFDSEFGLVARSIYECDDILAPVAIPYLPDGLRKMIRAAER QALADKRKPKLRGGVLPELYTPVAEGGRNNALARRAGFLLGVRKLTEEQTLKELLDIN QRCCQPPLGLCEVRNIARSIAKKHHRHG" gene 64686..66596 /locus_tag="SKA53_00345" CDS 64686..66596 /locus_tag="SKA53_00345" /note="COG5519 Superfamily II helicase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="DNA primase domain protein" /translation="MDDRTSLVAQLRADSEAARQAAEVAEAALEAQRQYADFGGALHM LKVTREKQAIPVRLCNFTAEIEREVVKADGLTTARHFTVSGRMETGNPLPTIDVPASE FDRLEWLATEWGASPQIFVGSRYRDHVAAAIKERSDPELVQLCQHTGWAKFDDELLYL TASGGIGTEGLNEEARCELQGSLADFSLPAPADPRTLGLADLLGAFRDVQKDGVGLVL LGGVMRATLCHFMPATLSIYLQGTTGTFKSAFAGVLQGFWGIKFDGANLPANWSSTGN ALEKTAFLAKDALLIVDDFVARGTRHEVAKTHANAERLLRAQGNQAGRSRMTSKAELR NAFHPRGIILATGEDIPNGHSLQARLVIVNVARGAIDTTVLSGLQKLARDGVLAKVMA SFVQWLAMESKRNALHEFIGMALEIDRENIGASGHARTQDNLANLLMGLRVFLDFADD AGEISSQVTQGFMDIAKDAACTLADLQAAIDHEASDAQRFVDLMRAAVSSGKAHIERS SGGKPDNARALGWRDVDIGQSGIRTEAMGTRIGWVDGEELYLDPTASLSVIKALASGL DNHLGSSERAIAKSLREAGLLSRCDKSRNTTKVSVLGARRSVYVFRMADIFDLDSASA SPIGYDDADIPF" gene complement(66808..67176) /locus_tag="SKA53_00350" CDS complement(66808..67176) /locus_tag="SKA53_00350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGISFKEAAQMWQFGPDWPGQACGAKTRAGTPCKNPAVTGKARC RMHGGKSTGAKTPEGRARLSALHLKHGRSTTEAKAEAKRRAQVGREIRAELRDIEREA IAGGLLAKDWREMFEPKPDK" gene complement(68771..69040) /locus_tag="SKA53_00355" CDS complement(68771..69040) /locus_tag="SKA53_00355" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILASGMIGAAAMLSAYSPMAIAQTQPAPTPATGTDAL LTMPLLEDKLWFIHAYAGRVRACTADGSSVAGDRPAPKCSQWSAY" gene complement(69045..69242) /locus_tag="SKA53_00360" CDS complement(69045..69242) /locus_tag="SKA53_00360" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKITVNGIDYDTENLSVNGKAQLASLQFLEVQMQKLKNEIAVY QTARAGYAAALQNELAKIEAA" gene complement(69293..69496) /locus_tag="SKA53_00365" CDS complement(69293..69496) /locus_tag="SKA53_00365" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKKTKEPVITIDEKEYAIAGLSEAARAHIANIQFVDVQIQQINN ELAVCDTARMAYTAAFSRELAKA" gene complement(69568..70344) /locus_tag="SKA53_00370" CDS complement(69568..70344) /locus_tag="SKA53_00370" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MTELAKACMCLPIAFIQQKDAFVPHAVQGLEQGRNLFVVNGKWV APYTPAVYRGYPFAVTEGEDDQLHLCIDMDSGLVGAGEGFDQPFFDDAGEAAQPVKDA LNFLQQIHRNRAVTKRVCAALAAEDLFQPWPLKVQTADGERNIEGLFRIDEARLNSLD PDALHRVHAAGGLPVAYCQLLSMSHVQTLGLIQRKLAEVKNRMPEMSDQIDVDGILQR HKSSEPEQTLEPIENDNVVNIAADEGDFDLSAFVNPKQND" gene complement(70529..73258) /locus_tag="SKA53_00375" CDS complement(70529..73258) /locus_tag="SKA53_00375" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNAGDSVTGGAGADVLAVFSSAAATLGGFVVTGVETISASSNSA TATDVLSLNLGSVTGETDLRVTGSSSSVTFTNTDNIANLTLSYNSAGNVIVAYNTSTI AGTADVQSLTTTDATNGVVTLAGIETVNIANSGVSTIATLTTAAATTVNVTGSGTLTL TDIDDVTTTLNMSAFTGTSVTGGYGAVNIAVTGGTGNDTFIVDMANITSLDTITGGTG TDTLRINDSMTTAADVAGITGIEVVELRNTGTGANDDTVDASIFATASINIRVADTND GTNAELVTVSNAGSTQSITMTDSTETEVNDANDGVSLTVTQKAGVGGSTDVLNLTLSG ETVLAVTANEYETINIATAGTVASSVATFSATTAQNIVITGSQALTLTAVDMEEQAAS PLATSKIDASAFTGALTLTVTNDEGDQIITGGSGNDTFTLGTSSLDSDDSIIGNGGTD TLVVTNFTGAAGEVNIDVERLTLELTTGAASSIDLRNATSLQRVTVDLDATDENITVS NIASSAAVILQDTTAADTDVVILSGITGDTDLTVTFSDEAGAADFNAALTANYDNLTL ATNDSADDITVAVLSATTLDNLTLTGAGDITISSATNTTSLDVLNASGVTGAITLTSL ARDGSAVITLGAGNDSINLVTTSHAGNTIAAGAGTDTLVISGASTSNIVINLASTTDQ ITNVSGAANSAAQTGFENVNASSVTVSGVNVTGSTVANTVVGTAQADTITAGTGALTV TGGAGDDVITLGSSVDTVVLTATAASASAGGADTIVGFTAGTGGDVMDISAFIGAAFT AANFDSATNATGDGALDDLHVERVEYAGNIAGLNFGTAGAANFDLVFGTAVYLSTDDN SAKTIIAVQGDDQTHIYTQTDPGGALIDAGDITLIAILSDVTNATDLVAANFA" gene 73819..75024 /locus_tag="SKA53_00380" CDS 73819..75024 /locus_tag="SKA53_00380" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Site-specific recombinase XerD-like" /db_xref="CDD:27722" /translation="MPKATLDTQFVSDAFCPEGKRKETYFDTSMNGLCLEVRISGGRT FYLRYRDTRGKTRYAKLADAQHVTLHQARTLCGRMRNKIAMGINPSAEKSIKRQVPTF GDFAQDRYMPFSQANKRSWKTDETLIRTHLIPTFGKMHLDEISTEDVLNMQQAGLKAG AAPGSVNRRLILLRYMFNLAWRDWKIAGVTENPTHGVRLLKENNKKERYVRAEEMARL YDEVCGSQNIMLKHIVAFLVLTGARRNEVLHATWHDINMTTGKWRIPETKSGYARHVP LNDGAMAVLQQMQDVSRSQYIFGNPNTGKPYVHIYYAWDIARRRAGLPDVRMHDLRHT FASLLVNNGSSLYAVQMLLGHTQIKTTQRYAHLTQETLLDVSNIGTAAMAATLGRSLH SDIIKGRHC" gene complement(75036..75101) /locus_tag="SKA53_00385" CDS complement(75036..75101) /locus_tag="SKA53_00385" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFDREEGQTFLPGPLAAMVAL" gene complement(75825..75898) /locus_tag="SKA53_t00544" tRNA complement(75825..75898) /locus_tag="SKA53_t00544" /product="tRNA-Arg" gene complement(75959..77359) /locus_tag="SKA53_00390" CDS complement(75959..77359) /locus_tag="SKA53_00390" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /db_xref="CDD:10512" /translation="MVNSLSGRFLILTIIFVMIAEIFIFVPSVARFREDYLRARLERA QIASLAVEVDAMISPALEAELLENAEVYNVVLRRDEIRQLALSSKLPAPIAATYDMRA PSGVTLIADALGTLVQKEDRIIRVIGNPVRDGGQLIEITMDERPMQAAMREYGRNILI LSAFISVMTAGLLFLSVQILLVRPIKGVVAHMQSYAKAPEDARQIITPTARVRELRDA EVALQMMQTQLTGALRQKERLAQLGGAVAKVSHDLRNIMTSAQLFTDRIGGSDDPLVK RMAPKLVNSITRAVNLCETTLAFGRVDEPAPALTRVNLSRIVEDVIDSERLAAGDYPL SFAEDIPATMTLRADGEQLYRVIFNLVRNARQAIMATGEPGEIGLHADEDELIWRLTV RDTGPGMPQKAREHLFQPFQGGVRKGGAGLGLVIAADLIRGHGGRLELRDTGARGTTF VIQLPKADLALADTAQ" gene complement(77375..78793) /locus_tag="SKA53_00395" CDS complement(77375..78793) /locus_tag="SKA53_00395" /note="COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /codon_start=1 /transl_table=11 /product="mercuric reductase, putative" /db_xref="CDD:10966" /translation="MNRITTDICIIGAGSGGLSVAAGAVQMGARVVLIEGHKMGGDCL NYGCVPSKALIASAKQAHMMRHGAPYGIGAVAPTVDYAAAKDHVADVIATIAPVDSVE RFTGLGVHVIQDYGRFISKTQVQAGNTIITARRFVVATGSSPLVPPIPGLADVPYHTN ETIFDLREKPDHLIIIGGGPIGMELAQAHRRLGCDVTVVEGAKAFGKDDPETAAIVLD SLRAEGVVIMEDAQAEKISQKDGKITVQTAKGDVTGTHLLIAVGRKVNTDTLDLQKGG IAYDRQGLKVGPNLRSVSNRRVYAAGDVAGGLQFTHVAGYHASVLIRSLLFALPSRQR TDHIPWASYTDPELAQVGLTEAQARKKFGSRLEVVRFDFHHNDRLIAERKTKGLIKVM VVSGRPVGVSMAGHLAGELIGIWAMAIANRMKMSAIAQTVLPYPTVGEVNKRAAGAYF SPRLFQNPKVKRVVGLVQRWLP" gene 78856..79044 /locus_tag="SKA53_00400" CDS 78856..79044 /locus_tag="SKA53_00400" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAGRVTCVLLDGVFQGAGIATSRGIDAKQADVSVYDPESCAKLQ AGTASALTASHAPSKEQV" gene 79102..79236 /locus_tag="SKA53_00405" CDS 79102..79236 /locus_tag="SKA53_00405" /note="COG0230 Ribosomal protein L34" /codon_start=1 /transl_table=11 /product="ribosomal protein L34" /translation="MKRTFQPSNRVRKNRHGFRARMATKAGRKILNARRAKGRAKLSA " gene 79253..79645 /locus_tag="SKA53_00410" CDS 79253..79645 /locus_tag="SKA53_00410" /note="COG0594 RNase P protein component" /codon_start=1 /transl_table=11 /product="ribonuclease P protein component" /db_xref="CDD:10464" /translation="MSVLKPPAEPDTGAPAVCVCLTVLTKRADFVRASHALRQGTPGI HLQARERARGEAAGIRVGFTCSKKVGNAVARNRAKRRLREVARQVLPEQGRDGWDYVL VGRHDVTASLPFDALVADLRRALRKVHA" gene 79642..79863 /locus_tag="SKA53_00415" CDS 79642..79863 /locus_tag="SKA53_00415" /note="COG0759 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:2337" /translation="MTPFAYILSLPVRAYRLIFSPWVGFNCRYHPTCSAYALEALEKH GAIKGGWLAFRRILRCHPWGRSGIDNVPD" gene complement(79860..80399) /locus_tag="SKA53_00420" CDS complement(79860..80399) /locus_tag="SKA53_00420" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLITLATLMLLAACTGKPSFDDPALSDRQLNLEEFFDGDLVAH GQFQDILGTVRRSFVVTIAGDWDCERLRLVEDFTYEDGATEQRIWTLVKTGDDTWDGT APGVIGTATGLEQGDRFNWQYEIDLPVPSADGTAETLRVTFDDWMWLLADDRLLNLAY VKRFGFDIGTVTISFEKLD" gene 80487..81338 /locus_tag="SKA53_00425" CDS 80487..81338 /locus_tag="SKA53_00425" /note="COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9912" /translation="MLDETEIHPLFEGAPTTTEFKKLRKRIVRQTREAITQYGMIERR SDGTVPKWLVCLSGGKDSYTLLAVLYELKWRGLLPVDLLACNLDQGQPGFPATVLPEF LARMGVPHRIEYQDTYSIVMDKVPAGRTFCALCSRLRRGNLYRVAREEGCSAVVLGHH RDDILETFFMNLFHGGRLATMPPKLVNEEGDLFLYRPLAHVAEVDCEKFAQAMQYPII PCDLCGSQDGLQRQQVKQILDGWERNSPGRRQVMFRSLMNARPSHLLDPKLFDFAALT LDAPHKD" gene 81500..82408 /locus_tag="SKA53_00430" CDS 81500..82408 /locus_tag="SKA53_00430" /note="COG1940 Transcriptional regulator/sugar kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11648" /translation="MMALGVDLGGTKIEAQVFADDWHLHERRRVATPASYPALVHALV DLVGWADGLADGPVSVGIGAAGMINPRNGRVLAANLAAHDKPLPADLVAALGRPVRYL NDSHALALSEAVFGAGQPFASVFALVLGTGVGGGHVRDGRLQTGFSGTGGEVGHLPAP AHLVQAHGLPVVDCACGRRGCIETLISGAGLARMAHAMTGETLSAPQIIAARGDDPRM AQLWQVWCALTADLVQTLMRTLDPDCIVLGGGLSDIPVVVDDLTRAVGQAGFAGFDSP VILRAAGGAASGARGAAYAGWQVADG" gene 82401..83537 /locus_tag="SKA53_00435" CDS 82401..83537 /locus_tag="SKA53_00435" /note="COG1820 N-acetylglucosamine-6-phosphate deacetylase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11530" /translation="MAEGWIIPTQVFDNGTLQSGLAVQVVDGRTTDLRAVAAVPPDAP RQAVPGVLTPGFVDLQVNGGGGVLLNHTPTCAGLMRIATAHRAFGTVAVMPTFITDAP EGLAKAAQAVIALQALGGQGALHIEGPHIAAARRGTHAANHIRPLDDITWQILFKLRA AGVTVMITLAPEMVPVDQIAALVRLGVIVSLGHSDATAEQANAAFAAGARSVTHLYNA MSQMQGRAPGLVGAAINSNAYVGVICDGVHVRDDMVALACRARPVAGRMVLVSDAMPT VGGPDHFDLYGQRIQLRDGRLVNAEGNLAGAHSTMLWGLQRLVGQVGLGLEQALHMAI SAPAALLDKPHLGRITGRFAADLFALDDGLALQPLSENIGHDIA" gene 83610..84218 /locus_tag="SKA53_00440" CDS 83610..84218 /locus_tag="SKA53_00440" /note="COG2834 Outer membrane lipoprotein-sorting protein" /codon_start=1 /transl_table=11 /product="Putative outer membrane lipoprotein carrier protein" /db_xref="CDD:12187" /translation="MKTRIIPFLVAFAMSVHGVGVSAQQLSLPQISDYLNQLQTAQGG FTQVNGDGTLSTGQIYIKRPGRIRFEYNPPQESLVMAGGGQLAIFDPRSNTGPDRYPL SQTPLNVILQRNVDLTAARMVTGSVSDGTITTVTVQDPDNPQYGDIQLVFTANPVELR QWIITDDLGNQTTMVLNDLTTGAPIGDIMFNIAAEMRRRGFE" gene complement(84280..84837) /locus_tag="SKA53_00445" CDS complement(84280..84837) /locus_tag="SKA53_00445" /note="COG4764 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13902" /translation="MVFLGSCGGSGNFSAPRNLDDACSIARERPHYFRAFQAAERKYG VPVPTMMAMVYQESKFIGDIRPPHTYALGVIPIGRQSSALGYSQALDGTWREYQRDVG RSRAQRDDIRDATDFMGWYMTKTVEQTGVPLYDTRNQYLAYHDGRQGYLRGTWRSKGW LIRIASEVDSRAVMYDAQLRSCRRR" gene 85066..85392 /locus_tag="SKA53_00450" CDS 85066..85392 /locus_tag="SKA53_00450" /note="COG3785 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13105" /translation="MLKKQAKYHLGQIVRHRKHPFRGVIFDVDAMFANTDEWYNAIPE DSRPLKDQPYYHLLAENEQSFYVAYVSEQNLVADHSGEPVDHPDLDDMFGPFENGHYP HQLQLN" gene 85464..86234 /locus_tag="SKA53_00455" CDS 85464..86234 /locus_tag="SKA53_00455" /note="COG3022 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:8810" /translation="MLVVISPAKSLDMTPVQIPASAPAFQDDALRLAKTARGLSLGEL KSLMTISDDLARLNRDRFAAFAADPAPEAVKPAALAFNGDTYQGLEAKTLSIDDLHWA QDHLGILSGLYGLLRPLDAIQPYRLEMGSKLKTRRGASLYDYWGDTIAKALNARAADV GADTLVNCASQEYFGAVDRKALKLRVITPSFMEVKDDKPRIVSFFAKRARGAMARFIV ENRLTDAEAIKDFTSGGYAYDADLSDGDTWVFVRDYPA" gene complement(86231..87406) /locus_tag="SKA53_00460" CDS complement(86231..87406) /locus_tag="SKA53_00460" /note="COG0183 Acetyl-CoA acetyltransferase" /codon_start=1 /transl_table=11 /product="beta-ketothiolase" /db_xref="CDD:27979" /translation="MTDIVILGGARTAIGTFGGALAGTTPIDLGTVVAKAALQRSGVA AAQIGHVAFGHVINTEPKDMYLSRVAAMQAGIPDSVPAMNVNRLCGSGVQAIISVVQS LMLGDADFGLAGGAENMSRSPFIIPDQRWGAKMGDIRTQDMMLGALNCPFGTGHMGIT AENVAREHGISRAEQDAFALQSQDRVAAAIAAGYFDSQITPVQVRVKRDMVDFIRDEH PKATTPQALAALRPVFEKDGSVTAGNASGLNDGAAAIVLARADAAQAAGLTPRFRILG YAHAGVRPEVMGIGPVPAVRRLLEKTGLAAADFDVIESNEAFAAQALAVSKELGFDPA RVNPNGGAVALGHPVGATGAIITVKAMYELDRTGGKRALITMCIGGGQGIALAIERV" gene 87536..88195 /locus_tag="SKA53_00465" CDS 87536..88195 /locus_tag="SKA53_00465" /note="COG1136 ABC-type antimicrobial peptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATPase subunit" /db_xref="CDD:10856" /translation="MTLLIVDTLTKTYATADGPFPVLRGVSLTLEAGESLALTGESGS GKSTLLHLIGGLDRADAGRIMLDGQDIARLDDAGRAALRRGTVGVVFQQFNLIPSLKI ADNIAFQARLAGRHDAAWCATLADRMGLTDHLRKYPEQLSGGQQQRVAIARTLAARPK LVLADEPTGNLDETTAATVMDLMLALVAETGAGLLMVTHSLVLAARLQRRLHLRAGQV A" gene 88192..90573 /locus_tag="SKA53_00470" CDS 88192..90573 /locus_tag="SKA53_00470" /note="COG0577 ABC-type antimicrobial peptide transport system, permease component" /codon_start=1 /transl_table=11 /product="permease, putative" /db_xref="CDD:25940" /translation="MTRAAFAALLSHWVRNPVQLFTLLAGLALATGLWSGVQAINAEA RASYDAAASTLDEGRYDRLVARDGAAFGQDVFVMLRRAGWLVSPMLTGDLDGVRLIGI DALTAPAGMGPVNLGGDVDLAGFLTGGDQVFANAATAPRLGAVTVLITPDLADDTAVA DIGTVQRLLGRAGRIDSLLVLPDQPRNLPPLARIAPDLTLQPAQGSTDIAGLTDSFHL NLTAFGLLSFAVGIFIVHGAIGLAFEQRRGMVRTLRALGLPLNRLIGLMLAELLVFAL VAGVIGVALGYVIAALLLPDVAATLRGLYGADVSGNLQLRPSWWASGLGIAFAGTLLA GGSALWGIARMPLLAAAQPRALAMAAGRRASFQLGAALVLLAVAIVLGFNADGLVTGF ALLGTLLIGAALALPPVLNGMLAFASGRARSVTAQWFWADTRQQLPGLSLALMALMLA IVANIGVSTMVSSFRLTFTGFLDQRLASELYISTDSAEQTAALVAFAEGAGAAVLPIQ SADLQIAGQPAEVFGTRDHATYRDNWRFLQSTPDAWDTTFAGQAVVINEQLARRGALG LGDMVTIGSLTLPVEGIYGDYGNPIGQVVLALDAFAQEFPAVEPRRFGLRVAGDPADF VAGLTAATGIGAGQTIDQAEIKALSLAIFERTFTVTTALNILTLAVAGFAILMSLLTL AAMRVPQLAPAWAMGMTRAALGRLELLRAVMLAVLTAALALPLGLALAWVLLAVVNVA AFGWQLPMYLFPLDYARLGGFALLAAVLAAGWPAWRLARTPPGDLLKVFANER" gene 90563..91588 /locus_tag="SKA53_00475" CDS 90563..91588 /locus_tag="SKA53_00475" /note="COG5621 Predicted secreted hydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14705" /translation="MNAKALILCLLPVTSLAQGFAGLGTEVDGFSTPAPDPVFDFPAD HGAHPDYRIEWWYLTANLEDADGTPYGLQWTLFRSALAPYEADGWDSPQLWMGHAAVT TETAHFVAERLARGGIGQAGVVADPFSAWIDDSALEGDWRTLQMRATGSDFSYDMALS ATGPLVFHGDGGYSVKSAAGQASYYYSQPFFDISGTLNLPTGDVQVTGSAWLDREWSS QPLADNQTGWDWFSLSFDDGAKLMGFRLQQTDGMHYTSATWITAEGETTPYADGALQV EPLLTNAAGVPVHWRLTLPARGVDVTVQAVNDDAWMTTSVPYWEGPVTFAGTHQGRGY LEMTGYD" gene 91581..92138 /locus_tag="SKA53_00480" CDS 91581..92138 /locus_tag="SKA53_00480" /note="COG0259 Pyridoxamine-phosphate oxidase" /codon_start=1 /transl_table=11 /product="Pyridoxamine 5'-phosphate oxidase-related, FMN-binding" /db_xref="CDD:25718" /translation="MTDWFTTLDGLRTRAWGMLARGVADARHPCRLPTVCTTSPDGWP EARTMVLRSADQGAAVVTLHTDLQSGKLASLQVNPRVALHVWLRPQALQIRLQAEVTV QSGPDVRPLWDKIPDHAQQSYGVTPPPGAPIGAALEYVKQPDPATFAVLSCRVMQIDL VHLGDQHRRAAYSRSDDWAGQWLSP" gene 92163..94259 /locus_tag="SKA53_00485" CDS 92163..94259 /locus_tag="SKA53_00485" /note="COG1252 NADH dehydrogenase, FAD-containing subunit" /codon_start=1 /transl_table=11 /product="selenide,water dikinase, putative" /db_xref="CDD:10969" /translation="MDKYPFTRDLVLIGGGHTHALVLRKWGMNPLAGVRVSVINPGPT AAYSGMLPGFVAGHYSRDDLDIDLVKLARFAGARMINGAVTGIDRTARTVTVPGRPPI GYDVLSIDVGITSQMPALDGFAAYGTPAKPLGAFAQAWDDYRARAKAPKIAVIGGGVA GAELALAMAHALQGKSPKLHLIDRGRALAALGDKARQKMLVALAGYGVEIIENAEVTQ VFREGVLLRDGRLIHSDFTTGAAGAKPHDWIAGTELDLQDGFISVTAQLQTSDRAVFA VGDCAHMAASPRPKAGVYAVRQAPVLFDNLRAILSGGRLRDYKPQRDYLKLISLGQKS ALAEKFGTVWQGPLLWRLKDRIDAKFMARLDDLPVMPPPQLPKIAAIGLRAALGDKPM CGGCGAKVGRAALQQVLGDAFGDDAGLVQTGQVITTDHLRALVADPVLMTRIAAIHAL GDIWAMGATPQAATVQIILPRMESALQQRTMAEITATTTAVMSEAGARIAGGHSALGD ELTIGFTITGLVDRPITQAGARAGDALILTKPIGSGTIMAGDMAGQARGADVIACLDL MVQSQAKAAAILHAAHAMTDVTGFGLLGHLRGICDASGTGAVLDWAQVPVMAGAAVLS ARGVRSTLFADNQAGAGVVEGAVPDLAYDPQTAGGLLAAVAGHSADDLLGALTRAGYT AAIIGQITDGSAISLR" gene complement(94246..95298) /locus_tag="SKA53_00490" CDS complement(94246..95298) /locus_tag="SKA53_00490" /note="COG2603 Predicted ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27919" /translation="MPIAFATLDDLIKHGFDTVIDVRSPAEFALDHVPGAINLPALSN DERARVGTIYKQISPFEARKLGASLVARNVADHIAQAMADKDGSWRPLVYCWRGGQRS GSFASILGQIGWRTDTVQGGYQTFRRLVQGAVYDRPVPHRVILLDGNTGTAKTALLAR LAAKGVQVIDLEAMANHRGSLLGGAAQGQPSQRAFETQIALALYRLDPARPVLIEAES SKIGSLVIPPSLWAAMTAAQRITLHAPLAARASFLARAYADIAADPDDMARRLAPLRY IRGHQVVDGWMALLHAGDLTGFATALMDQHYDPAYAKSRKIAAHDMLADLHSDTLDDA GQDRLVAAILPLVNAG" gene complement(95355..96296) /locus_tag="SKA53_00495" CDS complement(95355..96296) /locus_tag="SKA53_00495" /note="COG2017 Galactose mutarotase and related enzymes" /codon_start=1 /transl_table=11 /product="putative aldose 1-epimerase protein" /db_xref="CDD:25723" /translation="MQIFGTTTRGETVHAIPLRAGDLTLTLLTYGARIQDLRLAGIDH GLTVGSDDLADYEGAMLYHGAIVGPVANRITTARVRLDGMMYELERNNGQAHLHSGSE GSHAQVWDVIETTAASATLSLDMPDGFAGLPGRRRVTAQFTLSAPATLTLTLTATSDG TTLMNFANHSYWNLDGSGTWQGHSLRIAADHYLPIDDAICPTGDVADVTGTGMDLRHG PVLDAQTPPLDHNFCLSDGEEPLRDVLWLTGQGGVRMVMATTLPGMQVFDGRPDHDAL AIEAQHWPDAPNHTHFPQIKLPAGATYQQITRWSFAR" gene complement(96296..98197) /locus_tag="SKA53_00500" CDS complement(96296..98197) /locus_tag="SKA53_00500" /note="COG1874 Beta-galactosidase" /codon_start=1 /transl_table=11 /product="putative beta-galactosidase protein" /db_xref="CDD:11583" /translation="MHRTLGICYYPEHWPQDQWTEDAAHMVAAGLSWVRIGEFAWARM EAVPGTLTWDWLDRAIDVLGTAGLKVVLGTPTATPPRWMLDKYPDMLAVDAQARARKF GSRRHYDFSHPGYRNECRRIARLMGERYGANPYVAAWQIDNEYDCHDTTLSYSDAARR GFQDWLAHRYQSPAALNRAWGNVFWSMDYDSFAQIDLPNLTVTEPNPAHVLAFRRYSS DQVVAFNKVQADELRRHTSAPLIHNYMGRITTFDHWKVGDDLDIASWDSYPIGFLSDR LEGTAKEKATFLRQGHPDMQAFHHDLYRAVGKGRLWVMEQQPGPVNWAPYNPAPLPGM ARLWAWEAFAHGAETVCYFRWRQAPFAQEQNHAGLLRPDSRPAPALAECRQVADEIAK LPDVGTATAQAALVFDYASAWAWDTQPQGADFDAFRLAFAAYRALRRAGLNIDILPPD CADLSGYKLVLAPGLMKISDPLRAALARFDGIALIGPRSDTKTDELSIPTPLGPDLPD TDLSVVLTESIPPDAKIKLQGGGIFRHWFEHLEGTAPVHLSTKSGQPAIMGGDHLRYL AGWPDDATFDAIIGGLCDALDLPSFQLAEGLRIRDTATHRFVFNYAPRAQAWGGTIVP AAGVHWEAL" gene complement(98238..99059) /locus_tag="SKA53_00505" CDS complement(98238..99059) /locus_tag="SKA53_00505" /note="COG3386 Gluconolactonase" /codon_start=1 /transl_table=11 /product="Smp-30/Cgr1 family protein" /db_xref="CDD:8713" /translation="MIFDDTQCALGEGPLWHPLRGELFWFDILGKRLQSKARQWQFDE YVSAAGWVNADILLIASQTALIRFDLRDGSQTPLCPLEADSPHTRSNDGRADPQGGFW IGTMGINAEPGAGAIYRYFKGELRQLFAPVTISNAICFAPDGKTAYFTDTPTQKIMRV ALDADGWPQGDPVLHIDLRATDLRPDGAVVDAQGNLWNAQWGAGRVAGYAPDGTFIDS YSFAATQTSCPAFGGDDLSTLFCTSAATGLDGPDQGRTYATPTPYKGQAEHQVLL" gene complement(99056..99661) /locus_tag="SKA53_00510" CDS complement(99056..99661) /locus_tag="SKA53_00510" /EC_number="4.1.2.14" /note="COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase" /codon_start=1 /transl_table=11 /product="keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase" /db_xref="CDD:10668" /translation="MHRPLIAILRGITPPEAEAVTAALIAAGITKIEVPLNSPEPFDS IGRMARAFGDDALIGAGTVLSTADVGRVAQAGGRLIVSPNCDPRVIVATKTAGLQSWP GVMTPTECFAALKAGADGLKIFPASLIGPDGIKAIRAVLPKDTQVYAVGGASTSNFAT WIAASADGFGIGTALYQPGLTPAEVSTRAHDIVAAYDKAAG" gene complement(99664..100566) /locus_tag="SKA53_00515" CDS complement(99664..100566) /locus_tag="SKA53_00515" /note="COG3734 2-keto-3-deoxy-galactonokinase" /codon_start=1 /transl_table=11 /product="putative 2-dehydro-3-deoxygalactonokinase" /db_xref="CDD:16330" /translation="MTATITPAWIGVDWGTSHVRAWAISASGTLLAQASSDRGMGRLD RAGFEPALLALVGPWLHGPTPVIACGMVGSRQGWVEAPYAATPCAPLGGPLAPACSDD PRLAVHVIPGIKQLHPADVMRGEETQIAGYLAQNKGWDGVICLPGTHTKWVHVSAGEI VSFQTFMTGELFATLTTQTVLRHSIATDGWDDAAFDTGLADAYGRPEKLAGRLFSLRA EGLLHDLPGATARARLSGLLIGAELAAAKPYWLGQQIAVIGAGALARLYVTALAQHGA PATQVNAEAATLAGLTAAYRQLKG" gene complement(100563..101321) /locus_tag="SKA53_00520" CDS complement(100563..101321) /locus_tag="SKA53_00520" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="Short-chain dehydrogenase/reductase SDR" /db_xref="CDD:25396" /translation="MTATFHDLTGASVFITGGGNGIGAALTDGFLTQGAKVAFVGRSD ASAFVDQMAAKHANRPLFIPCDITDTDALQDAIAKAADAHGPLKALVNNAANDARHEA ATITPAYWDEMQAVNLKAYFFACQKAATVMAPQGAMINFSSISYLFGAAGMIGYTTAN AGITGMTRSLAREWGPRGIRVNAIAPGWVFTEKQETMWATPKTKAAFLERQCLPEPIM PADMVGPVLFLASDASRMMTGQVMVVDAGVVTTG" gene complement(101318..103402) /locus_tag="SKA53_00525" CDS complement(101318..103402) /locus_tag="SKA53_00525" /note="COG3345 Alpha-galactosidase" /codon_start=1 /transl_table=11 /product="alpha-galactosidase" /db_xref="CDD:12679" /translation="MTHTYRIDTGRQTLVLAARNTRLPQVVYWGAPLPADEDLAMLHA AHAIDITGGMLDENPDLSLCPEASRSFPGQPGLILRDAGGAPVLAMFSLVDAVQTATD LRLTYRDADNGLDLICTFLSDPETHIITCQTALNAEYPVYLDWLAAPVLPAPQHSETM IDISGRWCGEFQLAHTPWSAGIRLRESRTGRSGHEHFPGLIVPCHGATNTQGEAYAFH YGWSGGHRMIAEELADGRRQIQWGHAAGSDTQAATHFSTAPLYINYSDSGLNGCAVAF QRHLRDRIVTWPKPDTPRPVHYNCWEAVYFDHKLPVLKDIATRAAALGAERFVLDDGW FGRRDDDTTSLSDWIVDARKYPQGLQPLIAHIHGLGMTFGLWFEPEMINEDSDTYRTH PGWVLGRADQTRGRQQLVLNMALPAVREYLYGRIAAILTDHPIDYIKWDHNRVLPMPD AAQTRGTYALLDRLRVDFPAVEIESCASGGGRIDFGILQRTQRVWLSDSNDALERLRI QHDAALFLPMAVTGSHVGPRICHTSGRTLDMSLRAWVAAQRHMGFEMDPRELTDHEAA VLSKVTGWWKQNRHWLHSADILRLDSADPAVIAEQQLARDKARFVVFAGKAATSTQIV PRPLRLTGLDGQARYRVTLVNRDEAPGLSRGAPLLKSGSLVASGTYLMQHGVTLPWSF PDRIWVLQGESL" gene complement(103410..104258) /locus_tag="SKA53_00530" CDS complement(103410..104258) /locus_tag="SKA53_00530" /note="COG0395 ABC-type sugar transport system, permease component" /codon_start=1 /transl_table=11 /product="putative ABC transporter system permease" /db_xref="CDD:10269" /translation="MFPTPVQKSSPTVRLSYQAFLPVALILWLLPLIAVMIFSIKPDV DFTSGNYWGWPSSFEGFTNYGLVFFESAMPRYLLNSVMITVPTVIGTVALACMTGFAL GVYKFKGNLLIFFMFIAGNFVPFQILMVPVRDLTVDMGLYNTKTGLVLFHIAFQTGFA TLFMRNFIRALPFALIEAARVEGVAEWRIFWYVVLPLMKPAIAAMAVLIFTFIWNDYF WAVVLTQGPESQPVTAGITSFNAQYRAAYHLMSAGSIVAALPPVLMFFLMQKHFIAGL TLGAVK" gene complement(104358..>105331) /locus_tag="SKA53_00535" CDS complement(104358..>105331) /locus_tag="SKA53_00535" /note="COG1175 ABC-type sugar transport systems, permease components" /codon_start=3 /transl_table=11 /product="ABC transporter, permease protein" /db_xref="CDD:10893" /translation="QTGRRMSISADSDRQPPRGWYKRNEIAITPWLFLAPGVLFFVVY VIAPIWQSFGMSLYDWNGLGDIDTNGTYVGLENYNKLFGLNGERADRNFQISLWNNLR WLVLYLLAIPLGLFIALFLNQNVRGIRLYKSLFFFPFVISQVVVGLVFSWFYLPNNGL FTIVTGWFGFEISGGVLGNPNTATYGIIVAGLWPQTAYCMILYLTGLNAVDPEQVEAA RLDGAKGRKMLWHVILPQLKPATFIAFVVTIIGALRSFDLVSIMTGGGPFGSTRVLSF YVFEKSLSERGLQYGYAAAVAVVLFLIMLVFISYFLWTMYQDEKEAR" gene <105432..105511 /locus_tag="SKA53_00544" CDS <105432..105511 /locus_tag="SKA53_00544" /codon_start=3 /transl_table=11 /product="hypothetical protein" /translation="YLLAIPLGLFIALFLNQNVRGMKAV" gene 105561..105704 /locus_tag="SKA53_00549" CDS 105561..105704 /locus_tag="SKA53_00549" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFSWFYLPNNGLFTIVTGWFGFEISGGVLGTNTGGMRITAHPLG EDQ" gene complement(105698..106957) /locus_tag="SKA53_00554" CDS complement(105698..106957) /locus_tag="SKA53_00554" /note="COG1653 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter, substrate-binding protein" /db_xref="CDD:11364" /translation="MRSILKTSFAAFVAAGIAASAMPANAQSLSGDLVIFSDMSNPAP RAVMEGMVARFGEMHPDLNIELTVIDREAYKTQIRNFLTANAPDVANWYAANRMLPYV EAGLFEDVSDIWDGSMSEELGSTKGALTVGDAQYGVPYTYYQWGVYYRKDIFDQFGLT EPTTWQEELANCQTLIDNGIKCYTIGTKFLWTAGGWFDYLNMRTNGYDFHARLTNGEE SWTSDEVRATFENWRTLIDMGAFIDDHQNYSWQEALPFMVNGEAASYLMGNFAVAPLR EAGLTDNQLDFYQFVEITPGIPKGEDAPTDTFHIPSAAQNKEAAREFLRFVVSAENQT LINNGANLGQLPVNALSSVDEDKFLQQGFQMLSSGAPGGIAQFFDRDAPAEMAAAGME GFQEFMVFPDNLDDILERLEATRQDVY" gene 107115..107909 /locus_tag="SKA53_00559" CDS 107115..107909 /locus_tag="SKA53_00559" /note="COG1414 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11129" /translation="MTSDGTVGKALEVLDQVAAYGRPVRFSELLAASPFPKPTLYRFL QTLTNQRMLAYDPDRQTYSPGVRLVRLAHAAWEQSTLAPIARPHIDALSAAVGETVHL AQLDHAQVLYIDKRNANKPVQMFSQAGKVGPAYCTGVGKVMLAFCDPAVIAAVIEQQS FHRFTAATLTTPAALRTELSAIRANGYGFDREEHEPGIICIAMPILSDGGRVLGALSV TSTTSRTNLAGLESYVPILQDTASKIARDAQSWSFPDHDAKEPTGR" gene 107913..108974 /locus_tag="SKA53_00564" CDS 107913..108974 /locus_tag="SKA53_00564" /note="COG3839 ABC-type sugar transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13156" /translation="MSGVTLKNVVKRYGDVQVIHGIDLAIGDGEFCVFVGPSGCGKST LLRMVAGLEETTEGSMSIGERDVTRLDPSQRGVAMVFQTYALYPHMTVRENMGFGLKM NGHPKKVIAEKVAEATRILKLEPYLDRKPAALSGGQRQRVSIGRAIVRGPEVFLFDEP LSNLDAELRVEMRVEIARLHREIGATMIYVTHDQVEAMTLADKIVVLRAGRIEQVGAP MELYRDPDNKFVAGFIGSPAMNFLGGTAKDGTVTVPGMKADFAGVIPASYSGAVTLGM RAEHLAVDPAGDTHTVDLTESLGGVSFVYLTSDTGERIVIEERGDDRSVEGARVGVTI DKSRLYLFDAQTEVRIRNG" gene 109005..110216 /locus_tag="SKA53_00569" CDS 109005..110216 /locus_tag="SKA53_00569" /EC_number="4.3.1.19" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="threonine dehydratase" /db_xref="CDD:10889" /translation="MTLTAALIAQTYAAIAPATIRTPLIRATRLSHLLGIDLYLKLEN LQHTNAFKARGALAKLLTLDAAARKAGVIACSAGNHAQGVAYHATRLGIPSTIVMPEG TPFNKVQRTADLGAEVVIHGAGFDDSVQFTLDLAAQKGMTFIHPFDDPVVAAGQGTVA LEMLEQMPDLDCIVVPVGGGGLIAGMAVAAKSVKSAITIIGAQAHLFDAAKAQIEGVA PHFAGATLAEGIAVRQPAPANIAVIRTHVASIDSASESEIESAVFDLLSHEKLVAEGA AGAGLAVIKANLARFAGQKVGLVICGGNIDSRLLSTLILRGLMRDGRITRLVFEIDDR PGQLAMISRIIGDAGANVIEVIHQRMMQSVSLKKAELEIVIEARDQRHVDDITGLLRD AGLSVRTAQDL" gene complement(110285..111157) /locus_tag="SKA53_00574" CDS complement(110285..111157) /locus_tag="SKA53_00574" /note="COG3302 DMSO reductase anchor subunit" /codon_start=1 /transl_table=11 /product="dimethyl sulfoxide reductase, C subunit, putative" /db_xref="CDD:16271" /translation="MHPASSVIIFTTFSGLGFGLLFWLGIGAITPTGLMALIWFAIAY LAAVGGLLASTFHLGRPERAIKAFSQWQTSWLSREGICAVATLLIMAAYGAGLVFFDT VLAPLGWLGAAGALATVFTTAMIYAQLKTVPRWRHWSTPALFLALSVGGGALLGGQVT EALVLLGLAAALQVYTWVTGDTRLARSGTDMASATGLGHIGTVRAFEPPHTGTNYLMR EFIHVVGRKHAQRLRIIAVALAFVLPIIFLLVPFSHIWGALALVSHIAGVLVLRWLFF AQAEHVVGLYYGKR" gene complement(111157..111918) /locus_tag="SKA53_00579" CDS complement(111157..111918) /locus_tag="SKA53_00579" /note="COG0437 Fe-S-cluster-containing hydrogenase components 1" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster-binding protein" /db_xref="CDD:10311" /translation="MTQLPASTAKKLGLVIDLDTCVGCHACVISCKGWNTENYGAPLS DQNAYGADPSGTFLNRVHSYEVQPEVGTAQLIHFPKSCLHCEDAPCVTVCPTGASYKR VEDGIVLVNEADCIGCSLCAWACPYGARELDAKAGVMKKCTLCVDRIYNENLPEEDRV PACVRTCPSGARHFGDLGDVDSDVSQLVAARGGFDLMPEQGTKPVNKYLPPRPKDVMP EYDVLAPFLEPVATDGKGFAHWLDKALSALPGGAK" gene complement(112017..112142) /locus_tag="SKA53_00584" CDS complement(112017..112142) /locus_tag="SKA53_00584" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDVAQMTKGQIILLIIAFVTITLGSFIWFIATWDPAMRVPV" gene complement(112124..114949) /locus_tag="SKA53_00589" CDS complement(112124..114949) /locus_tag="SKA53_00589" /note="COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing" /codon_start=1 /transl_table=11 /product="oxidoreductase, molybdopterin-binding" /db_xref="CDD:28633" /translation="MSLDQPQLDTSPHVSDELRKTTCYMCACRCGINVHMKDGKVAYI EGNRDHPVNKGVLCAKGSAGIMQHNAPSRLRAPLRRVGERGSGEFEEISWEEALQTAT DWLAPIRANHPEKLAFFTGRDQSQSFTSFWAQGFGTPNYAAHGGFCSVNMAAAGIYTM GGAFWEFGQPDWDHTKLFMLFGVAEDHDSNPIKMGIGKIKARGARIIGVNPIRTGYNA VADDWVGITPGTDGLFILALVHCLMSAGKVDLDYLAQFTNASVLVNEDPKSDQFGLFL RDAAGQPQVIDRRTGQLAPWNGQGVEPDLAATHRAAGITHRPVFHQMADRYLDPAYAP EAVADRCGISAQRIRALAADLARVAFDEPVILDRAWTDFRGKKHAQMVGRPVSFHAMR GISAHSNGFQTCRALHMLQIILGAVETPGGMRFKPPYPKPATAHPKPHGKVTAGAALD GPHLGYVQGPEDLLLHDDGTPIRIDKAFSWDNPMSAHGLMHMVISNAHAGDPYKIDTL FMYMANMSWNSSMNVGGVHKMLTDKDENGDYVIPRIIYSDAYSSEMVAYADLILPDTT YLERHDCISLLDRPICEADGVADAIRWPVVEPDRDVRGFQSVLCDLGARLGLPGFVND DGSAKYKDYADYITTHIRRPGIGPLAGFRGADGQDEGRGTANPDQLQSYIDNGGFWIS HVPENCAYYKPFSTEYQDWAVKMGFYDVVQPYIFQLYVEPLRKFQAAAEGRGHRQPPD HLRGQIKATMDPLPIWYPPFEDGHVDPAEYPIHALTQRPMAMYHSWGSQNAWLRQIHG HNPLYLPTKIWDQHGFQDGDWARVSSAHGAITVPVAHQAGLNENTIWTWNAIGKRKGA WALDETAPEATKGFLLNHLIHELLPPRGDGLRWANSDPVTGQAAWFDLRVKIEKSGLP NEAQPVMPALKSPVPPAPKNLAWMSRK" gene complement(114970..115158) /locus_tag="SKA53_00594" CDS complement(114970..115158) /locus_tag="SKA53_00594" /note="COG0282 Acetate kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10156" /translation="MKGAVQTGSAMATTGGIDENAGEIRSRIMDHLAFLDKVPLHVIP ADEEKQIARDALTLLAQY" gene complement(115155..115904) /locus_tag="SKA53_00599" CDS complement(115155..115904) /locus_tag="SKA53_00599" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIMPFDLGPGTAILLGFALLGAAFVRGYSGFGFSAIFIAFAALL TNPLPFIPVVFACEIMMTAFQARGIRAHVDWHRVGWLIVGAAIALPFSVSVMLSVGED TARIAISGVIVLMALLLLSGWTLQRRIGALGHGSVGVLSGMCNSAGIGGLPVAAFLSA QPVQAAGFRATMIVYLTALDLITLPLLWLGGLVTWDTVIAALMAFPILGLGVWLGGRR FLAASPAAFRQSAVLLLLMLSALGLIRAMVT" gene complement(115901..117367) /locus_tag="SKA53_00604" CDS complement(115901..117367) /locus_tag="SKA53_00604" /note="COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /db_xref="CDD:10886" /translation="MSISIETFFLDPSAVGTLQARIQQMVAQGILAGRFRPGERLPSS RMMAQHLGVSRITVTLAYTELVADDYLTARGRSGYYVSDNAPEPPAFAMQQTQTGTVD WTRAIGQRFTPALSIEKPTDWANYRYPFIYGQADRTLFDTANWRLCALRALGMRDFGA LTADYYDGDDPELVDFISRQTLPRRGILANPDEILITMGAQNALWLSAQVLLNSRRRA AIEDPCYPAMRNILMQSRCQLSIVPVDQDGLPPDALSDDIDVLFSTPSHQCPTAATMP LDRRKALIAKGEAQDFIIVEDDYEFEMSFLKPPSPSLKSLDPHGRVIYVGSFSKSLFP GLRLGYLVGPAPFIKEARALRATVLRHPPGHIQRTVSYYLSLGHYDALIRRMSRAYHD RRQVLDAALQDSGLVVAGQGQSGGSSVWVRTPDGTDTTPLAQSLRAKGVLVEPGARFF AGDAPPTEYMRLAYSSIPASRITEGVRLIAAALTKNAA" gene complement(117428..119014) /locus_tag="SKA53_00609" CDS complement(117428..119014) /locus_tag="SKA53_00609" /note="COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /codon_start=1 /transl_table=11 /product="taurine--pyruvate aminotransferase" /db_xref="CDD:10036" /translation="MISATCNGKPDFRIRTSPVYMRKSGIMFACHLALLIMVQDGSQW DAMHKPADRIRRPPKSFFKTEPPDMDTLNFANDPGHVIEADRAHVWHHISQHKAYETI DPRIIVEGRGLRVWDIKGKEHVDAVSGGVWTVNIGYGRERMGRAISDAVTKMCFFGGA LGTIPGAQFAEMLIEKMPGLDRVYYANSGSEANEKAFKMVRQISHKHYGGKKSKILYR ERDYHGTTIANLSAGGQDERNAQYGPFVPGFIRVPHCLEYRSQDGTLGEEYAANAAKA IEDVILAEGADTIGALCLEPITAGGGIIVPPSGYWQRVQELCRKYDILLHIDEVVCGL GRTGAWFGYQQFGVQPDIVTMAKGVASGYAAISCCVTTNAVFEMFKDDTDKLSYFRDI STFGGCTAGPAAAIENMRIIEEEDLLGNSVAMGAHLSGNLHALMDKHKWIGDVRGMGL FQGAELVADRTTKEPMDEKKVQAIVADCMAQGVIIGATNRSLPGFNNTLLFAPSLIAT KDDLNQITEAVDQAITRVLG" gene 119023..119541 /locus_tag="SKA53_00614" CDS 119023..119541 /locus_tag="SKA53_00614" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMTVSALLILLPALIGFVVLLARHRKPTRPAAVIARHAIVVDGS NVMHWGGAPSAKVLARVLGALQTKGYTPIVFFDASVGYRLADRYLDAGDLAGLIGLPA AQIHVVDKGVIADSAILEFSALHGLRIVSNDQYRDWRVQFPHLHRKGAVLRGRFQDGA VVWQQRLKLVRA" gene complement(119521..119982) /locus_tag="SKA53_00619" CDS complement(119521..119982) /locus_tag="SKA53_00619" /note="COG0748 Putative heme iron utilization protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10616" /translation="MKREPVNPTDDAARVLVRQLLGDMRHAALAVIHPDTGAPYVARV GLIWHGTTALTLVSTLSTHTQALLAHPACAVLVGEPGAKGDPLTHPRLTLSAQAAQVD KPAHKDIWLAAVPKAKLYYDFTDFVMFRLAPTGIDLNGGFGKAYRLRADEL" gene complement(119979..120404) /locus_tag="SKA53_00624" CDS complement(119979..120404) /locus_tag="SKA53_00624" /note="COG0326 Molecular chaperone, HSP90 family" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit B" /translation="MKHLTCALFVLVTPAAAWEFSPAPICTLTDADGLITVTYDAALP EYSVTLTLPDGTWPDDPTFAMNFAGNRPIFIQTDRHRVSPDRRSLTVTDSGFGNVLDG LQFNLRAYATSGDSTLGLSLDGIGPAMAAFRACPAANLA" gene complement(120450..122696) /locus_tag="SKA53_00629" CDS complement(120450..122696) /locus_tag="SKA53_00629" /note="COG0556 Helicase subunit of the DNA excision repair complex" /codon_start=1 /transl_table=11 /product="UvrABC system protein B" /db_xref="CDD:10427" /translation="MTKDNNYRSIKGIPAMAYAQTDKSPPVYLANPAPDVKSREKMEG GRRFVLKTEFEPAGDQPTAIAELSAGILAGERDQVLLGATGTGKTFTMAKMIEQTQRP AIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEAYVARSDTYIEKESQINE QIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYGAMTQDIHAGQSYDQRQIIAD LIAQQYRRNDQAFQRGTFRVRGDSLEVWPAHLDDRAWKLSFFGEELESITEFDPLTGT KTGTFDKVRIYANSHYVTPKPTMQQAVIGIKKELRMRLDQLVAEGKLLEAQRLEQRTN FDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGG MYKGDFRRKMTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWEMEQTGGV FTEQIIRPTGLIDPMIEIRPVETQVDDLLDEVRKVAAAGYRTLVTTLTKRMSEDLTEY MHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDA DKEGFLRSETSLVQTIGRAARNAEGRVIMYADRITGSMERAMGETERRRTKQLAYNEK HGITPTTVKKNVEDILAGLYKGDVDMNRVTAKIDKGRAGGNIKTVIDGIRTDMRKAAE NLEFEEAARLRDELKRLEAVELAIADDPLARQQAVDKAVDDAAKASGRSTGGRGGMRG GKSRYAKK" gene 122745..123977 /locus_tag="SKA53_00634" CDS 122745..123977 /locus_tag="SKA53_00634" /note="COG2309 Leucyl aminopeptidase (aminopeptidase T)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:2596" /translation="MTMIDPVKLDRLAEVAVRTGVNLQKGQDLVITAPLSAIELVRAI TVHAYKAGAGIVMPFFTDEAITLARYEHAEDASFDRAPGWFYEGLAAAYKGGAARMAI TGDDPMLLADQDPAKVARLSKATSIAAKPAMAPIVGFEVNWNIVAFPGAGWAARVFPD LPVEQAQGKLMDAIYTASRLDGDDPVANWAAHTTELQKRVKWLNDHDFAALKYTGPGT DLMLGLADGHIWKGGASPALNGVVCQPNIPTEEVFTCPHAYKVDGVVSATKPLAHQGN VIENIKVRFEAGRIVEATATKGEAVLQALLNTDDGACRIGEVALVPHSSPISQSGTLF YNTLFDENASCHIALGQCYADTIEGGSEYSAEELQQKGGNQSLIHVDWMMGSDAVDID GITKTGEVIPVMRKGEWA" gene 124034..124360 /locus_tag="SKA53_00639" CDS 124034..124360 /locus_tag="SKA53_00639" /codon_start=1 /transl_table=11 /product="NADH-ubiquinone oxidoreductase family protein" /db_xref="CDD:16096" /translation="MKGPKMRARIYKPARTAMSSGIAKTRSWVLEHVAEAARSIDPLM GWTSSSDTQAQVRLYFDSKEAALDYAHENGIEAVVQDPKLRKPNIRAGGYGENFATNR RGAWTH" gene 124414..124487 /locus_tag="SKA53_t01096" tRNA 124414..124487 /locus_tag="SKA53_t01096" /product="tRNA-Arg" gene complement(125113..125328) /locus_tag="SKA53_00644" CDS complement(125113..125328) /locus_tag="SKA53_00644" /note="COG1055 Na+/H+ antiporter NhaD and related arsenite permeases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDFRQEQAKLTSWREILMTGSFASIINVSGTSYFYGFEIQSASA YFIGDLGGLLACMVILMLGFRWLRRTQ" gene complement(125680..125928) /locus_tag="SKA53_00649" CDS complement(125680..125928) /locus_tag="SKA53_00649" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLWQMEVEVGLETLPQPQKDVYYAACLVADDKQLVHSDVVKHQP ILALMSRPTFYRALKSLVEKNLLVHAGPHQDGRYFVKR" gene complement(127553..127777) /locus_tag="SKA53_00654" CDS complement(127553..127777) /locus_tag="SKA53_00654" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVMELSLKLYSFLAIRVLEPSVTQRSSTLMETVFLISLHLQHHM GGMLTRLAATGMELKAMLSITIKVEQGFSA" gene 129350..129607 /locus_tag="SKA53_00659" CDS 129350..129607 /locus_tag="SKA53_00659" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKQTGRCTRHGGKSTGPRTEEGRARIAAAQTTHGRLTKEARAEA TRWAQVGREIRAELRDIEREAIAGGLLAKDWREMFEPKPDK" gene complement(129819..131729) /locus_tag="SKA53_00664" CDS complement(129819..131729) /locus_tag="SKA53_00664" /note="COG5519 Superfamily II helicase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="DNA primase domain protein" /translation="MDDRTSLVAQLLADSEAARQTAEVAEAAVEAQRQYADFGGALHM FKVVKDKQPIPVRLCNFTAEIEREVVKADGLTTARHFTVSGRMETGNPLPTIDVPASE FDRLEWLATEWGASPQIFVGSRYRDHVAAAIKERSDPELVQLCQHTGWAKFDDELLYL TASGGIGTEGLNEEARCELQGSLADFSLPAPADPRTLGLADLLGAFRDVQKDGVGLVL LGGVMRATLCHFMPATLSIYLQGTTGTFKSAFAGVLQGFWGIKFDGANLPANWSSTGN ALEKTAFLAKDALLIVDDFVARGTRHEVAKTHANAERLLRAQGNQAGRSRMTSKAELR NAFHPRGIILATGEDIPNGHSLQARLVIVNVARGAIDTTVLSGLQKLARDGVLAKVMA SFVQWLAMESKRNALHEFIGMALEIDRENIGASGHARTQDNLANLLMGLRVFLDFADD AGEISSQVTQGFMDIAKDAACALADLQSAIDHEASDAQRFVDLMRAAVSSGKAHIERS SGGKPDNARALGWRDVDLGQSGTRTEAMGTRIGWVDGEELYLDPTASLSVIKALASGL DNHLGSSERAIAKSLREAGLLSRCDKSRNTTKVSVLGARRSVYVFRMADIFDLDSASA SPIGHGDADIPF" gene complement(131722..132603) /locus_tag="SKA53_00669" CDS complement(131722..132603) /locus_tag="SKA53_00669" /note="COG0554 Glycerol kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDFKNNSPQPHMSSTLAPQEEVALAAANWVKMGFPVEVRRNGLP TVDPRSPEQRKDPVATYFILCEISGLGLAVKTGPKTGLLAITASTSDENSGLNALRNA GFYCPQCDSPIRYDAIMDGKFEGGFHTMLYYVGKETFLRTALSELDGVVVEGSGEVIT IPPGICDYGLALGVSTKATYEGPETLAPVGIPYLPDGLRKMIRAAERQTLADKRKPNS RRGVLPELYAPVAEGGRNNALARRAGFLLGVRKLTEEQTLKALLDINQRCCQPPLDIC DVQSVVRSIAKRHQRHG" gene complement(132603..132797) /locus_tag="SKA53_00674" CDS complement(132603..132797) /locus_tag="SKA53_00674" /note="COG3311 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24803" /translation="MSTITRFIGRRELLNELGVSKTTILRWTAERGFPQPLPRSGQVP IYDLAKIEAWLLGVAEEEVR" gene complement(132986..134146) /locus_tag="SKA53_00679" CDS complement(132986..134146) /locus_tag="SKA53_00679" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="possible phage-related integrase" /db_xref="CDD:27722" /translation="MPKLSTVRLTDTFIRSLRPKDQRYDVFDASQPGFGVRVATSGAL SWVLLTRENGRRKRITLGGYPAISLSKAREAARLALSEIQEGTFGRKNAPATFETAVE EWYAREQRAKKSFRQVEQAMRLHVLPFLGRHQLDQIKKADLMRVIDRVAERGKLTQAN RVRAFITRFFNFAIERDLLMSSPAAALPRPAVEISRDRVLSRDELCAVWETAEQMGFP FGRITQLLILTAQRRDEVAGMRWSELDLDRARWIISKERAKNGKAHIVHLSPQALALL STIPRQNGVDLIFTTTGRSAVSGFSKAKAALDARSHVSDWRFHDLRRSAATFMAEELR ITPVVVDRILNHVSGTVRGVTAVYLRGEHLADREAALAAWGQLVENLVNSNK" gene 134745..134867 /locus_tag="SKA53_00684" CDS 134745..134867 /locus_tag="SKA53_00684" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTHIYGDLAENARFVAAFKTALRRIWADGMSAAIQNYLSR" gene complement(134928..135635) /locus_tag="SKA53_00689" CDS complement(134928..135635) /locus_tag="SKA53_00689" /note="COG1814 Uncharacterized membrane protein" /codon_start=1 /transl_table=11 /product="similar to nodulin 21" /db_xref="CDD:28436" /translation="MNMPYEPAHEEVHYINRAGWLRAAVLGANDGIVSISSLIVGVAA ATPEPTAIFVAGAAGLAAGAMSMAAGEYVSVSSQSDVERADIAREQQALIDTPAAEEA ELASIYESRGLTKKTAALVARELSEKDALGAHVRDELGLSEVHTANPLQAAIASGFTF TVAAALPLAAAILAPSDKILPTVVIATLICLAGLGALGAHIGGAPKPRATARVLFWGA AAMAITACVGALFEVSI" gene 135917..138202 /locus_tag="SKA53_00694" CDS 135917..138202 /locus_tag="SKA53_00694" /note="COG2838 Monomeric isocitrate dehydrogenase" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase, NADP-dependent" /db_xref="CDD:15587" /translation="MDGKGLNSPDSHLKDRNSPMTNNATPDIIYTKVDEAPQLASVSL LPVIQSFAKAAGVSVGVKDISLAGRIIAAFPENLRPDQRQPDDLAELGQLVKSPNANV IKLPNISASVPQLVAAVKELQAKGYAIPDYPQDPANDAEKAIRARFDAIKGSAVNPIL REGNSDRRAAVAVKNYAMSNPHSMGAWAPDSKTIVSTMAGNDFFSNEKSVTLTAEQAG DARIELVGADGSITVLKDKVSYTAGTVVDATFMSAKALDAFLAEQITLTKDAGILFSI HLKATMMKVSDPIIFGHAVKVFLQPMFDTYGATLAAAGISPNSGLGALLDQVAALPQG AEILAAIDAVMAERPALYMVNSDKGITNLHVPSDVIIDASIPALIRAGGKGWGPDGKA ADTNCIIPDSSYAPIYDESVAYFKETGALDPRTAGTVQNVGLMAQKAEEYGSHPTTFE IPHAGTARIVFANGDIVLEHAVEAGDIWRSASTKQAPIEDWVKLAISRQKAEGCQAIF WLDAARAHDAELIKYVEPILAAAGVADKFQIMTPRAATRVSLETIRKGKNSIAISGNV LRDYLTDLFPILELGTSAKMLSIVKLMNGGGMFETGAGGSAPKHVQQLAEENHLRWDS LGEFCALGESLKFLAETKDNDKARILGNAVDRATQGVLDNNKSPQAKVGQTDNRASHY FFALYWAQALATQNEDSSLLATFAPIARALEENEAAILAELSTAEGKPADLGGYYLTD ADKTESVMRASPTLVKILSVL" gene complement(138269..139120) /locus_tag="SKA53_00699" CDS complement(138269..139120) /locus_tag="SKA53_00699" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, inner membrane subunit" /db_xref="CDD:10470" /translation="MSDANLNTDENVTPDTVWVEHTSFVDQIPRSILMLFVFAVFVGL WQIATSFNLVSSIVLPTPVETFNDMIFVGKNLLTGDYMLSALWITTKEVIYGFALAMA IGFSLGILVGETAFGERAIMPYLVALDTMPKVAFAPLFIAWLGFGIESKVALAAFIAT FPIVVGTAAGLHATDENSRMLFKTMGASRLQTLFKMKLPMGLPQIFTGLKIGAVGVMA GAITAEFLGGGKGFGELIRVAASQLNTPRVFSLILYLSILGLGLYALVTFAQRRIVFW HRDTVSK" gene complement(139117..139929) /locus_tag="SKA53_00704" CDS complement(139117..139929) /locus_tag="SKA53_00704" /note="COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATPase subunit" /db_xref="CDD:10838" /translation="MTTISAATSDVQPALGAPVYELTHVSKTYARNRVIALDDVSLTL RKGSFSSVIGSSGCGKSTLLKIMAGLIPPTKGRVVLQGKPVTGTRRDIGMMFQQATLF PWRTTIENIVLPIEIRDGRAAAEKAKEKARALLDIVGLNGFEDVFPNELSGGMAQRAS ICRMLITEPAVLLLDEPFSALDELSRDMMNMELQRICTEQNATAFLVTHSIQEAVILS DDIYVMKPRPGRLAEVVTVDLPRPRTLDMMTTPKFGETVNYIRGLLDKGEAM" gene complement(139929..140879) /locus_tag="SKA53_00709" CDS complement(139929..140879) /locus_tag="SKA53_00709" /note="COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic binding protein" /db_xref="CDD:10584" /translation="MAQDLRDVTFVQPSPSAINSFPVFVAIGEGYFAEEGLNVTVESI NGSSAVLQALAAGQAEFGRPGPGPVLAARARGEDAVFIYNVAARSNFGVVVRADSDIQ GPEGLRGKVIGTGTADGAEVGFARNVMAGSGLTEGTDYEFLTVGDGGPATVGFTTGAM DAYSASTADAAILNQRGMAVRDITPGEFARFFGNGIATMGNVIETDPELVAGFVRAFA RGHAFALDDANRDTVLAHLKDANPQEGEDVQFQSALFDAVRSKTIPVDMTNGLGYQPP EVWEEWQDSLVSGGDLAAPLPDLTAAYTNEFTAMAHEAMK" gene complement(141012..141926) /locus_tag="SKA53_00714" CDS complement(141012..141926) /locus_tag="SKA53_00714" /note="COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /codon_start=1 /transl_table=11 /product="putative enzyme" /db_xref="CDD:10054" /translation="MRLATLLIGGKPAAAAQLASGAWLNIAQAAAADPQTKVEADSLQ SLIQGGDAAMAGVAALVAQADSGQHAHAVVSDAVLMAPIPDPRKNIFCVGRNYAEHIA EGEKAQNIKVGVTEHPVFFTKPPTSVVAPGGDVLIFPTISQDIDYEVELAVIIGKPGR NIAKADAFDHVFGYTILNDITARDVQRRHGGQYFKGKGFDGSCPIGPWIVTKDAIKNP HDLSIRLSVNGQQRQNGKTADMIFDIPTLIASLSEGLTLEPGDIIATGTPSGVGYAMD PPQFLKAGDQVVCDVSQIGQLANTVRNA" gene 142096..142788 /locus_tag="SKA53_00719" CDS 142096..142788 /locus_tag="SKA53_00719" /note="COG2186 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11894" /translation="MSKTEILVQRVKQMIDSHGYAHSDRLPCEREMCQTLGVTRNQLR RALAELEGQGLIWRHVGRGTFLGARPVLNLEDVTYLRDRVKPAQVVSVRFTIEPELAR LAAIYGKKADHEEIQHCADRCRNAPDWRGYEAWDNKLHHAIARASQNQLHLYYFETLN VVRRSVVWGQPRKTIKPADGYSSFHEHDVIVQAILTHDADLAAHSMMDHLRSVYSRIL PSMNLDIPKEYA" gene complement(142853..143536) /locus_tag="SKA53_00724" CDS complement(142853..143536) /locus_tag="SKA53_00724" /note="COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /codon_start=1 /transl_table=11 /product="fumarylacetoacetate hydrolase family protein" /db_xref="CDD:10054" /translation="MSDFVIPLPAVTTIPVASGGSFPVRRVYCIGRNYAAHAIEMGHD PDREAPFFFQKNPNNLDSTGTFPYPPHTSDVHHEAELTVVLKAGGTNIAVENALDLVY GYALSLDMTRRDLQGEMKKAGRPWEIGKAFERSAPIGPIHIVSEVGHLDSGAITLKVN GELRQQGDLNQLIWKTSEMISYLSEYFELAAGDVIMTGTPSGVGPVVKGDVMEMEIAG LGSLTVTVT" gene complement(143852..144766) /locus_tag="SKA53_00729" CDS complement(143852..144766) /locus_tag="SKA53_00729" /note="COG1910 Periplasmic molybdate-binding protein/domain" /codon_start=1 /transl_table=11 /product="DNA-binding protein, excisionase family" /db_xref="CDD:11619" /translation="MQNYPDDESTRSGVPSLMTTTEVAEYLRVKQRTIYEMVTRQTIP FTRATGKLLFPRRLIDVWLEAQTEAPVTGAFRAAPIYAGSNDPLLEWALRQSGAGLAV LTHGSTHGLRELADGRAMLVGSHLLDAASGEYNLPAVQSFLPGGGFVMVHWARRTMGL LTGPGNPRAIKRLEDVVSQRLRFAARTEGAGSQQLLDVLLGRAGLTADDLQFAPRQAE THADLATMIEIGEADCGIGLQAVSGQLGFVPLVGNESFDLIMRRRDYFEPQVQALLAF ARTDAFAARAAHLSGYDVTELGKVRWNS" gene 144857..145552 /locus_tag="SKA53_00734" CDS 144857..145552 /locus_tag="SKA53_00734" /note="COG4662 ABC-type tungstate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="sulfate/tungstate uptake family ABC transporter, permease protein" /db_xref="CDD:13805" /translation="MDGPFLIALGLIASGDPALTDIIALSLKVTLTAVSIGCLIGLPL GAGLALAQFPCRGAIVVAFNALMGLPPVVAGLLVYLMLSRSGPLGDLALLFTPTAMVI AQAILILPIVISLTRSVVEDLWAEYREQLRSLGAGRLRAVPTLLWDGRVSLVTGILAG FGRASAEVGAVLIVGGNIAGHTRTMTTAITLETSRGSLGLAVALGIILLLITLSLNAA AWGLAQSARGRLG" gene 145513..146286 /locus_tag="SKA53_00739" CDS 145513..146286 /locus_tag="SKA53_00739" /note="COG1135 ABC-type metal ion transport system, ATPase component" /codon_start=1 /transl_table=11 /product="sulfate/tungstate uptake family ABC transporter, ATP-bindingprotein" /db_xref="CDD:10855" /translation="MGAGAIGTGTVGMKVDKVIAPAQSILPLQLRAVGYSVGKTRLLD GIDLTVRAGKRLVVMGPNGAGKSLLLRLCHGLIAPTSGSVSWQTQDPRPAAQAMVLQR PVVLRRSVRANLDYPLALAGYARAARDEMVQKTLARFGLIALAERPARLLSGGEQQRL ALARAWALRPQVLFLDEPSAALDPSATRAIEDLIGQFSAEGITIVMTSHDLFQARRLA QDIAFLHRGRLIEHGPAAQFFDAPQTPQARDFLGGALIW" gene 146294..147133 /locus_tag="SKA53_00744" CDS 146294..147133 /locus_tag="SKA53_00744" /note="COG2998 ABC-type tungstate transport system, permease component" /codon_start=1 /transl_table=11 /product="molybdate or tungstate transport" /db_xref="CDD:12341" /translation="MINKEKINMFSNTRAILLCAVSSLGSIVAVPAFAQDFITVASTT STENSGLFGHILPLFSEETGIEVRVVAQGTGQALETGRRGDVDVVFVHARSAEEQFVA EGYGVARFDVMYNDFVIVGPDSDPADTRAAQNAMEAMTAIAQAGAAFASRGDDSGTHK AEQALWSAAGIVPEGAWYLETGSGMGATLNTAVQVPAYALTDRGTWLSFANRGDLTIT YEGDPVLFNPYGVILVNPERHAHVKAQEGQAFIDWLVSDAGQQAIAAYQVGGNQLFFP NAQ" gene complement(147288..148856) /locus_tag="SKA53_00749" CDS complement(147288..148856) /locus_tag="SKA53_00749" /note="COG2268 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11974" /translation="MSALGWIIVIVIVAAIFIALAASFYQRATNEVALVRTGLGGRRV VIDGGALAIPFFHEINRVNMQTLRMDVARSGEASLITKDRLRVDVGAEFYASVTPNDN AVTRAAQTLGKRVFQPDQLKSLIDGMMIDALRSVAAQMTMDELHENRASFVKQVRDAL TDTLANYGLQLDSVSLTALDQTPFAALDENNAFNAVGMRKLAEVIAKSKKERAEIEGD SQVSVARAAMESERRKLEIDLEQRRAEIAQTQEVETLMAAQISEIAVRRANSERTAAQ ARIQMEQDIASADIAKELTLRRAEIAQALALEVAEQDRAISFAAKSQEESRAHADADT ARIDAVKASVAVQTARQMAEAERRKALTLLAAQEQAEAAAVRAKITAASDKATAADKT AAKREEAEALKAMKLAETEARLAQIQAENARSEAQVAMEVELARLQALPKILAEMVKP AEKITGISINQISGLDRKGGDGPTSPINQTVDAIMDMAVSLPALKKLGKNIGVEIDTN LLKTSPKPKNDHEG" gene complement(148870..149676) /locus_tag="SKA53_00754" CDS complement(148870..149676) /locus_tag="SKA53_00754" /EC_number="1.1.1.50" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-alpha-hydroxysteroid dehydrogenase" /db_xref="CDD:10756" /translation="MSWERAPLLKGKTIVVTGSASGIGQETARVCSAMGARVLGIDVT KRFDHVEEFYRADLSDGATIDALIDVLPKGIDGIANIAGLPPTAPADKVVAVNLFGLK HLTLGLIPKLNDGASIVNLASLAGFGWPDAVHAIRASEDVHVDDAARFAVDHQITNEG GRSYFFSKEALIAWTMQNRWTWRDRGIRMNAVSPGPVDTPILGDFLETLGARAEEDAR IMDRPGTPQDLAPIVAFLLSDMTTWIRGTNIPADGGMSSNILCEMHGLSS" gene complement(149678..151078) /locus_tag="SKA53_00759" CDS complement(149678..151078) /locus_tag="SKA53_00759" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="Aldehyde dehydrogenase" /db_xref="CDD:10741" /translation="MFDDINPSTGAVWAQVPDGGRTEARDAISAAQAAFPAWAALHFQ DRARILLKAADIWEARKMDFVAAAQAEGGGWFGKGMFEAGYVPEVFRAAAAMCYNAVG EMLPSQHGKISMVQRVPMGVVTVISPWNMPGILTSRGFAFPLAAGNTIVLKPSEDTPY AGGLFFAEIMEEAGIPKGVFNVVTCSRDRVAEMGDELVENPMVKGVSFTGSTPVGRQI AAKAGAHLKKACVELGGKDSLIVLEDADMDRATSAASFGSFMHQGQICMSVEKVLVHE NIYADFLRQFVARAAKLKTGDTADKSNVIGPLINDRQVERVKFQIEDALAKGAKAVLG GRVWDRFVEPTILINVTPDMAVWQDETFGPVAVVVPFRTDAEAIALNNDTEYGLSAGI ITADENRALEMSRKLETGMCHVNCSSVNDEPHVPFGGSKASGVGKHGGKWSMETFTET RWITLDRGGRPFPAVF" gene complement(151146..152291) /locus_tag="SKA53_00764" CDS complement(151146..152291) /locus_tag="SKA53_00764" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="putative branched-chain amino acid transporter ATP-binding protein" /db_xref="CDD:10284" /translation="MLELNNVTVSYGQHRALENASVKVSKGEIVVILGANGAGKSTLL KAASGICEGVVAGEIRLEGTDLLGLPANKIVDVGLALVPEGRGVFPDLSVRENLTLGA YSARAREDERVTLERVFTLFPKLSERTKQIVGTMSGGEQQMVAIGRAMMSNPTILTLD EPSLGLSPLLSKELFQNLARVKDLGIGVLMVEQNAKQSLAIADRGYLIENARVVHEDS AANLMRDPAVQAAYLGVGSSEPAAKVSATTTIPDTGSESFTIRPRSQKTQSADAILGR SVADLVAAASSQSVSANAQKRPSTSHQTKVVVPSDRLAAALAQIESGAINARKRPKPQ LLTHRQSIPPSLDRSPEAKPCPVIEVYRAPRVEVYRRQPDGNGFERK" gene complement(152284..153015) /locus_tag="SKA53_00769" CDS complement(152284..153015) /locus_tag="SKA53_00769" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="putative branched-chain amino acid transport system ATP-bindingprotein" /db_xref="CDD:10285" /translation="MTNHVLSLRGVTKRFGGLVAVNAMNFDVAEHEVVGLLGPNGSGK STTLNLISGALPLTAGNVSLWGSRISGLPAQTINRKGVSRTFQLVRLLPSMNVRDNVV VGAVFGHRRRWGHDANEHAEKLLERVGLGGKGDMSLGQLTYIDTKRVELARTLASDPK VLLLDEWLAGLNPTELQIGINLIKSLRDEGRTIILVEHVMDAIRSLCDRCVVMAAGTK IAEGTPTQVLSDKKVITAYLGDDDA" gene complement(153017..153952) /locus_tag="SKA53_00774" CDS complement(153017..153952) /locus_tag="SKA53_00774" /note="COG4177 ABC-type branched-chain amino acid transport