LOCUS 1099451320118 3067252 bp DNA linear CON 31-OCT-2005 DEFINITION Loktanella vestfoldensis SKA53. ACCESSION VERSION KEYWORDS . SOURCE Loktanella vestfoldensis SKA53 ORGANISM Loktanella vestfoldensis SKA53 Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella. REFERENCE 1 (bases 1 to 3067252) AUTHORS Hagstrom,A., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C. TITLE Direct Submission JOURNAL Submitted (28-APR-2005) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..3067252 /organism="Loktanella vestfoldensis SKA53" /mol_type="genomic DNA" /strain="SKA53" /db_xref="taxon:314232" gene 356..429 /locus_tag="SKA53_t00542" tRNA 356..429 /locus_tag="SKA53_t00542" /product="tRNA-Met" gene 549..719 /locus_tag="SKA53_00005" CDS 549..719 /locus_tag="SKA53_00005" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQRTLSFEITTEHVVFNTLASADLVIWISICLKALVYATTDGSG KRFDPAYATQPA" gene 896..1345 /locus_tag="SKA53_00010" CDS 896..1345 /locus_tag="SKA53_00010" /note="COG3019 Predicted metal-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12361" /translation="MKRRDFLITASSAAVLALPVRAAVAKMQVLKSPTCGCCSAWVAH IEDAGLVVETQDVSQEVLWAAKDKAGITPELSSCHTGFIDGYVIEGHVPAADIQRLLT ERPDAIGLTVPGMPIGSPGMEMDNRRDAFDTLLVLRDGSIVVFSSHT" gene complement(1391..1588) /locus_tag="SKA53_00015" CDS complement(1391..1588) /locus_tag="SKA53_00015" /note="COG2608 Copper chaperone" /codon_start=1 /transl_table=11 /product="Heavy metal transport/detoxification protein" /db_xref="CDD:12125" /translation="MNTFHIPDMSCGHCKTIVEKAIKGLDPEAQINFDMETRRIALGS VVDTAIVQAALAEAGYPATPI" gene complement(1610..3943) /locus_tag="SKA53_00020" CDS complement(1610..3943) /locus_tag="SKA53_00020" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="cation transporting P-type ATPase" /db_xref="CDD:11924" /translation="MDHDHPHAAPEMQAGAETAKDPVCGMTVAVKPDGRHAEFEGETF HFCSEKCQTKFKADPWHYASGRAAGVKKTAPAHAQYTCPMHPEIIRDAPGACPLCGMA LEPMLPSDEPSEELTDFTRRMWISAAAAVPLIVLTMGGLVGLPVRDWIGHQTASYLEF VLATPIVLWAAWPFFKRGWDSVVNRSPNMWTLISLGVSAAYLYSIFATFLPGLFPDQY RMGAGVGTYFEASVVIVALVFVGQVLELRARERTGDAIRALLDLAPKTARRILPDGTE YDAPLENIMEGDRLRVRPGDAVPVDATVIEGRSSLDESMLTGEAMPVEKGPGDAVTGA TINKNGALVIEAGKVGADTVLAQIVTMVSNARRSRAPIQGLADRVSAVFVPTVVGTAI FAFVVWMIFGPDPALVFAIASAVSVVIIACPCALGLATPISITTAAGRGAQAGVLIKD AEALERMASVDTLIVDKTGTLTMGKPTLTDKVTLGDVTKAELLSLAAALERGSEHPLA EAIVEGAEAAGAARQEATEFEAVTGKGVRGQIDGHAVTLGNTAMMQEIGLDTGAAEEK ADALRAEGKTAMFVAVDGALAGIVAVADPIKDSTAQAIKALHAQGLRVIMATGDNERT AKAVAERLGIDEVRAGVLPEDKKKLIDQLRKDGHKIAMAGDGVNDAPALAAADVGIAM GTGADVAMESAGITLLGGDLMGIVRARKLARATLRNIKQNLFFAFAYNSLGIPIAAGL LYPVTGLLLSPMIAAAAMSLSSVSVISNALRLRRVDL" gene complement(4598..5332) /locus_tag="SKA53_00025" CDS complement(4598..5332) /locus_tag="SKA53_00025" /note="COG3971 2-keto-4-pentenoate hydratase" /codon_start=1 /transl_table=11 /product="2-keto-4-pentenoate hydratase-like" /db_xref="CDD:13277" /translation="MKHLDAFADALIEAHQSGNRCAPDGPAPKTNAEAYYIQARVSAA LGPIAGFKAALKPGQEPIMSPIVPGFVFASGATVAIGDVMGVELEVGWKIVAPLPDQS ADDFEAKLCRSVRPVPVIELVNSRLRAPLAEDPIAKLADFQINHGLIIGATMGDWDGR DIGNIKARMQAGDNIMLDGPADVPGGSAFSTLKMLLAKIGTHCGGLQVGQIVITGSLH PLTYIDVPCEVHGQIDGLGAISVRLN" gene complement(5329..5949) /locus_tag="SKA53_00030" CDS complement(5329..5949) /locus_tag="SKA53_00030" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13408" /translation="MNPNSNRATTREMAAIASTILPDVQGWTAPDGPGLLTSMTLLDA AAAHVAAAEIPDAVGGIIVCAFGDPGRAALAARLDIPVIGIGESAAIAAASGGRRYAV VTHTPGLVSGIDMLMRTAAPSGAYLGTFLTDGDPVILSADEDALDAALLAATHRAHSA GAQAVIIGGGPLGQSAERLRPLAPCDLIAPIPEAARRMLRIMEEWQ" gene complement(5979..6443) /locus_tag="SKA53_00035" CDS complement(5979..6443) /locus_tag="SKA53_00035" /note="COG0251 Putative translation initiation inhibitor, yjgF family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:28356" /translation="MSCPIEAQLGKLGLALPPSAPSRALFLPGKITGNLLFLSGQICE WEGVPKYFGPIGTGFDTAIGQQAAQMCALNLLFSIRAVAGSLTKVSQIVRVGGFVAAD PGYPDGPQIVNGASQLFIDLWGDAGRHARTAVNVASLPANALVEVEAVVELN" gene complement(6440..7618) /locus_tag="SKA53_00040" CDS complement(6440..7618) /locus_tag="SKA53_00040" /EC_number="3.5.1.4" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="amidase" /db_xref="CDD:15348" /translation="MLIDKDPFNCFMPYEAIRVAHAADGPLAGLTLAVKDIFDVAGYR TGSGCPTRLAQSPVARKTASAAQRLLDAGAQFVGKTHTDELAWSMYGMNAHFGTPVNP AAPDRIPGGSSSGSAVAVAGGLADIAIGSDTGGSVRAPASFCGIWGLRPTHGRVCLDG VQPLAPSYDAVGLFARDGATLARAADALLGPDTAALPPNPVLLRPTDMIAQLAAEQQA IYVSVFGALQAQDVEVFPQGVAAVYDIFLTTISGDAKAAIVPWIKASGMPLVRGIHGR VAAAEQLAEAQIADARKARANYAAKIVALLGDTGVLLAPVVPEAPFRLDAPIEVFDTY RHDAMRLLCVAGLVGLPQVTFPAGSIDGAPFGLSLIGPRGSDLSLIALANALAKGTTT " gene complement(7622..8602) /locus_tag="SKA53_00045" CDS complement(7622..8602) /locus_tag="SKA53_00045" /note="COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /codon_start=1 /transl_table=11 /product="putative oligopeptide ABC transporter, ATP-binding component" /db_xref="CDD:10318" /translation="MTENLVDIRNLNVRFSGARTVHAINDLTLTLKQGETMALLGESG SGKSVTLKTLLRLLPPKRSHIDGNIVVNGVDVLTLSGKKLQAYRGEEVSMVFQEPGLA LDPVYTVGDQIAESVMRHKGVRKDEALSTALDMLRRVRIPSPERRLHNYPHELSGGML QRVMIALALACRPRLLLADEPTTALDATVQIQILLLLRDLQKEFGMGVIFVTHDIGVA VEVSERIAVMYAGQIVEEGTTREIIKDPRHPYTRGLLAANLHDAARGARLNAIPGAPP PLDTRPDACSFAPRCPLAEPQCLAALPPVHSPNDRRRVACIHPNAPILAE" gene complement(8599..9651) /locus_tag="SKA53_00050" CDS complement(8599..9651) /locus_tag="SKA53_00050" /note="COG4608 ABC-type oligopeptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /db_xref="CDD:13764" /translation="MSKTETLADTQPDKGGPAQPLLIVRNLQKYFPVRGGIFGGKKAV VQAVDGVSFEVKKGETLGIVGESGCGKSTTARLLIGLLDKDKGEIIYDGQDLGGTLSL RELRRGVQMVFQDSYASLNPRLTIEASIAFGARIQGLSDPVGRARKLMERVGLAPDRF AQRYPHEVSGGQRQRINIARALAMSPRLVVLDEAVSALDKSVEAQVLNLLADLRREFG LTYIFISHDLNVVRYISDRILVMYLGEVVEIAPVDDIWTSQAHPYTRSLFSAMPSMDP DNRTKEPPLAGDPPNPINPPSGCRFHTRCRFSEDVCKAKVPLLHPLTAGSDHLAACHL HDISSGHSKAGKDVFE" gene complement(9638..10525) /locus_tag="SKA53_00055" CDS complement(9638..10525) /locus_tag="SKA53_00055" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10891" /translation="MALIETHGLEDPISEAGKGYWSGVGSRLIRDPVTMICLGVILLL ILSAVFAPYLGLADPYTGSMIKRLAPIGTEGHILGTDEQGRDMLARLIYGGRLTLFIG LMPVVLAFFIGGALGIVAGYLGGWVNTVIMRTVDVFFAFPSVLLAIAISGALGAGILN SLVSLTIVFIPPITRVAEAVTSGVRSLDYIDAARASGANALTVIRVHVIGNVLSPIFV YATSLTSVCMILAAGLSFLGIGVRPPEPEWGLMLNTLRSAIYINPWLSALPGLMIFIT SLCLNLLSDGVRSAMNVKD" gene complement(10530..11528) /locus_tag="SKA53_00060" CDS complement(10530..11528) /locus_tag="SKA53_00060" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10471" /translation="MHVMARDLIYLRTATVFTYFLRRVILMLPVAFGVSVICFMLVQI APGDPLTAIMPVDATADEQAAMRAIYGLDKPLPVQYAIWIGNLFQGDMGKSIATGRPV ADEVFGAVQNSLLLAFSAAVIAFPIGIFLGFLAGYFRDTLLDRAVTAISIAGVSVPNY WLGIVLVIIFSVNLGWLPSMGAGPGGSQDWAWDWLHMRHLVLPAVTLAVVPIGIVART VRALAGDLLTQDFVTALYAKGMSRGDVLRHVARNAAATALSVMGLQLGYLLGGSILIE TVFNWPGSGFLLSNAIFQRDLPLLQGTILVLALFFVAMNLIVDVAQAAIDPRIKRS" gene complement(11547..13145) /locus_tag="SKA53_00065" CDS complement(11547..13145) /locus_tag="SKA53_00065" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /db_xref="CDD:10615" /translation="MKHFKKGVATLLVAASLCAQGAWAQGTLRVGMTAADIPLTTGQT DQGGEGMRFMGYTVYDSLIEWDLTSADKPSALIPGLATAWSVDDADKTKWTFTLREGV TYHDGSPFTAADVVWNFDKLLDETSEQYDSRQAAQGKSRIPAVASYTAIDDYTLEIIT KTPDATLPYQLAWILISSPAQFEAVGKDWEAFAASPSGTGPWKLETFVPRERAELVPN TAYWDETRIPKLDKMVLIPLPEPNARAAALLSGQVDWIEAPAPDTIPAMTGNGFVISS NAYPHNWTWHLSRTEGSPWNDIRVRQAANLAVDREGMSALLGGLMIPAKGFLPPSSQW FGTPTFDVRYDPEAAKALLAEAGYSLENPLKVKALISPSGSGQMLPLPMNEYLQQNLA QVGIDVEFVVVEWNQMINLWRAGAEDPSVEGAMSINFTYFIQDPFTGLIRHLSCDLIA PNGTNWGHYCDPEMQGLFDQIKNTFDAEEQDAVMRATHEKYVNDALFLMVTHDVAPRA LAPNVKGFVQAQNWYQNFSSITME" gene complement(13424..14356) /locus_tag="SKA53_00070" CDS complement(13424..14356) /locus_tag="SKA53_00070" /note="COG0388 Predicted amidohydrolase" /codon_start=1 /transl_table=11 /product="N-carbamyl-D-amino acid amidohydrolase" /db_xref="CDD:10262" /translation="MSRVVRTAAAQMGPISRDETRASAAERMVALLDQAARQGANLVV FPELALTSFFPRWFMPDQADVDAFFETEMPNAATETLFARARALGIAFSFGYAEMCQH DGKLHRYNTAILVDGAGQIVDRYRKVHLPGHPEHEPWRPFQHLEKRYFDPSPFGFHAV DTLGGKIGQAICNDRRWPETYRELALAGAEMVLIGYNTPRHYPPAPKHDHLQDFHNHL SLQAGAYANGMWVIGVAKAGIEEGCDLIGGSAIVAPTGEIVVQAQTLGDEIIVADCDL DRCAEIRANIFDFAKHRRPEAYTRIAAKDAPAKG" gene complement(14449..15804) /locus_tag="SKA53_00075" CDS complement(14449..15804) /locus_tag="SKA53_00075" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="putative glutamyl-tRNA(Gln) amidotransferase subunit (EC 6.3.5.-)" /db_xref="CDD:15348" /translation="MSIWQTDVTALLAAYATGQVTPVQAVEAMLARIAMLNSTLNAYT AMNDLGLSEAVAATARWRAGAPNGPLDGVPLIIKDNLVTAGMPAAWGNAHLARQIATH DEAPIARLRAAGAIFLGKGNTPEFAIEGYTDNLTFGVTRNPFDPALTPGGSSGGVVAA VAAGLAFAGIGTDGGGSIRRPAGYTGLFGLKPGIGHVPRAGGLAQVLLDFEVVGPIAR SARDLTLLDTVLSGGPNKAPSERPLSILAIATLGDAPCDPTIRAAFTATCDRMSALGH AVVKGSMPLDIGQLNAVWTDIGAIGLAAYLEDHPEVRVSANPKYIAIAKTGAKKSGAD LYRILDLVFKLRHETAELFQQYDAILMPTAAANPWPAAEPFPDTIDGQSVGPRGHAIY TGWINAAGLPAVAFPAPTAGLPIGMQLIGPMGSESSIVAVAGACAAAFAWPAIAKDPN D" gene complement(15801..17102) /locus_tag="SKA53_00080" CDS complement(15801..17102) /locus_tag="SKA53_00080" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="putative membrane protein" /db_xref="CDD:11306" /translation="MTIADIAIGFSVMMGLLLIGFPVAIVMVAMGVVGGVLLYGPVLL ESMGPVLWGVQNENVLTAIPLFILLGELLLRSGIADRMYGTLAMWLGGLPGGLLHTNI GCCALFAATSGSSVATAATVGTVALPSLNERNYSSSRALGSLAAGGTLGILIPPSVNL LVYGSLANVSVGQLFIAGIIPGILLTLSFMILIALQHYWKPDDVSKPLQVSRAERIHA LRHLIPPAVVFAIIMGSIYMGIATPTESAALAVIAALVFVWREGRLSLSFLDVCFRQT AKTTGMILLIIAAAFTLNVTLALGGITNAMSSWVGGLGLTSTALLFALMLFYLILGMF MDVLSMQVLTIPVVVPIIIAAGIDPIWFGIFVVLMSELGMITPPVGMNLYVVQGVRSD KGPFMDVIVGALPYAAIMLLFATMLIFLPSIVMWLPSSLAR" gene complement(17099..17668) /locus_tag="SKA53_00085" CDS complement(17099..17668) /locus_tag="SKA53_00085" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13808" /translation="MEFIATWISRLFGWSLLFLSCFVALETVMRKVFNTSLQGADELG GYILAFGSSLAFVVTLAERAHIRIDVLHRKFPIFVQSLIDWLAALSMAVLGCFLLYVG WFVLKDTLAYGSTAATPWATPLIWPQTAWYGALAIFSISAIALSARATWLFFAGDHRT LAAEFNPKGAADELVDELQELAKRKGKLQ" gene complement(17727..18758) /locus_tag="SKA53_00090" CDS complement(17727..18758) /locus_tag="SKA53_00090" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding protein" /db_xref="CDD:11350" /translation="MKTTHIISTIALLSLAVPASAETTMRVMGQPAATGLIQNNVEGP FFADFAASTGLDITAEFQPADITGIKDTEQLRVLKSGLFDIISLRLSQVSRDEPTILG LDLVGLNPDYASGRETVAAFQSVVDARLQEQFNTKLLGVWPFGPQVLFCEPEISSLAD LSGLKVRVYDQNLANFISLVGGTPVPLSFGDVQQSLARGVVDCAITGPSSANSAGWPE VTSYMMPIAFQMAMNGYGMNLDTWNALSAEDQEKMQAAFDTLIEDIWTYSEELFVDAV QCNVGQQPCETGTLYDLTLVEVSDADKALISTAVTDVSFPAWKEICDATNPACSSSWL ETVGVAKGY" gene complement(18755..19537) /locus_tag="SKA53_00095" CDS complement(18755..19537) /locus_tag="SKA53_00095" /note="COG3473 Maleate cis-trans isomerase" /codon_start=1 /transl_table=11 /product="Asp/Glu racemase" /db_xref="CDD:12801" /translation="MTVFERQTGKRVGMLTPSSNTVLEPYTSAMFAPFGDAASAHFGR FRVVEISMSDASQGQFTDAPILEAARSLAEAKVDLIAWNGTSASWLGLEKDRALCAMI EAETGIKATSTSLAYDHLFRGMGLKSLGLVTPYLTEVQDLIVAQYASQGIAVSADARL EEKVNHAFGTYSADQIAGMIREVAKSKPQAISILCTNFRGAPQAAALEAETGIPILDS VSVTAAHCMREMGLDPARVNNWGSVFQLFSDLHYPSQQREKQ" gene complement(19534..20934) /locus_tag="SKA53_00100" CDS complement(19534..20934) /locus_tag="SKA53_00100" /EC_number="3.5.2.2" /note="COG0044 Dihydroorotase and related cyclic amidohydrolases" /codon_start=1 /transl_table=11 /product="dihydropyrimidinase" /db_xref="CDD:28175" /translation="MTYDLIIRGARVVTGAEVVECDIGIREGRINALGQDLGPADEVI DATGLIALPGGIDSHVHIAQPSGPGIEMADDFASATRSAACGGNTTVMPFCLPEDGVT LRQAVNDYHAKADGQCHVDVSFHLIIKDTDAQTLGQDLPALFAAGYTSFKVFMTYAGL ALSDREILDVMDVAKAHNAMVMVHAENEDAIEFLRDKAEASGNTGPVHHARTRPIPVE REATHRAISLAEIAGVPLTIVHVSNGAALEEITRARRRGLKVFAETCPQYITLTADDL DRAGFEGAKYVCSPPPRDSAEQAAIWAGLEQGDFDLFSSDHCPFRFADSAGKDAQGAR ATFRNIPNGIPGVETRLPILFSEGVMKGRITLPRFAAITATNHARLYGLAARKGAICV GADADIALWDPNLTKPIRQTDLHHGSDYTPWEGFEVTGWPVRTLLRGQTVAKDGEIVG AATGDYLSRSAPEFLI" gene complement(20931..21647) /locus_tag="SKA53_00105" CDS complement(20931..21647) /locus_tag="SKA53_00105" /note="COG4126 Hydantoin racemase" /codon_start=1 /transl_table=11 /product="putative hydantoin racemase (EC 5.1.99.-)" /db_xref="CDD:13408" /translation="MTDNMAAIARATVGDLAEIIPVTATRGFPYIASRAEAQIAGGIV LEMIAEHASTVDAVVIAAFGDPSLKGARDLFDLPIVGMAEAAVMTAALLGESFAVVTF SPLMTRWYDECVQATGLGNRFKGVLTPDITPARLTDVQTDLGADIITMATTAATRHHA DVIILGGAPLAGLAPKIASQVPAIVIDPIAAAVLQAMTLVRMTAHAATPLRVNKPAAK TSIGLAAPLAMAIHHGGAAS" gene complement(21763..22644) /locus_tag="SKA53_00110" CDS complement(21763..22644) /locus_tag="SKA53_00110" /note="COG0726 Predicted xylanase/chitin deacetylase" /codon_start=1 /transl_table=11 /product="putative polysaccharide deacetylase" /db_xref="CDD:25772" /translation="MTERRDFKGYFGAEPPPNWPQGARLAVSLVVNVEEGAELSIADG DERNENTYEIREEVVGYPDPCMETHFTYGTRQGYARIAKAFETYGAKATFSSCGRAAE RSPWLLQDVVSRGHEVSCHGWRWERQAEMARADEAAMIARTHAAIETACGVAPVGWHT RSAPSVNTRDLLLEHGGFAYDSDVYDDDIPRMHDATHVILPYAFDTNDMRFSPGGGFV QHSDFSNYVIGAFDRLYAEGAGAVRIMSIGLHLRLIGRPGRIKGLEDVLAHITGKPDV WIAPRREIAAHWKVHAQ" gene complement(22641..23441) /locus_tag="SKA53_00115" CDS complement(22641..23441) /locus_tag="SKA53_00115" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10895" /translation="MTQTDRITIFFAWAVGIGCIIFLMLPIVITVATSFTSSSVYTLP PPEWSLRWYRSLERRSGLWEAVQLSLNLAFISTAISMVLGTMAAIAVARGEFRGKQAI ATFTVSPLMMPGLVVGVAMLQFFREIGLRDAYWSLLLAHVVITLPFVMRTLLASMGAF DFSLIDAARTLGMSYPRAILKVLIPNLAPAYLTGGLFAFLASMDNYPISIFLTDARNK TLPIKMLQYLEEQPDPSLAAMSSGLILMAIIVLVVASRTVGLNRMIET" gene complement(23438..24268) /locus_tag="SKA53_00120" CDS complement(23438..24268) /locus_tag="SKA53_00120" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein" /db_xref="CDD:10894" /translation="MIARSNRIALLAVPGLAFLAIIYALPLVMLLFKSIQGAEGLTLV TYIDFFRDEFNQTVLWRTLRVALLTTLLALVIAYPTAFAMARAKGIWLTVFMVALVLP MSLGVIVKAFAWSILFRSNGFLNTTLQAIGMTDGPVRMLFTETALIVGAANVFLPFMV LPIYSVLRQLNSSLPEAASSLGATPWFRFTRVTLPLSLPGVVAGSAFTFSLAISMYVI PSLIVGERQQTLSMLIARSFLYLRNEPLGSTISAVLLAIAIFVVLFSSWLAGRLGARQ " gene complement(24265..25359) /locus_tag="SKA53_00125" CDS complement(24265..25359) /locus_tag="SKA53_00125" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, ATP-binding protein" /db_xref="CDD:13158" /translation="MFAQATEQRPPAHRYLDVVGAAKSFKGTVVMDNMNFRVAKGELV SLLGPSGCGKTTLLRIIAGLLEADTGDIILGGRNVSSLPAHKRNISVVFQNYALFPHL TVAENVAFGLRARGMSKSDVKAPVAEALALVRMDTFADRPVSALSGGQQQRVAVARAL VVSPDLLLLDEPFSALDRKLRETMQIELKALLRSRGITAIFVTHDQEEAMGVSDRIAV MNSGRIEQFADPSTLYAQPASPFVMDFVGLSTRLTGHVIAQADGIATVKTHVGKVRAN SQLVVGTPVQVGVRPELITPDPSTEMNQIKVQLDDVMTLGSKTVLHGVTTGADKFLCE LPGIRTGYARGETVTWGWAVADTLIHEVPA" gene complement(25364..26359) /locus_tag="SKA53_00130" CDS complement(25364..26359) /locus_tag="SKA53_00130" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="ABC transporter substrate-binding protein" /db_xref="CDD:10556" /translation="MAAVGTFAAPSILRAQSSELVIGCAGSHTAWMEALVTPHMKASI GADIIFEGTKSSVNLEKMSSNKDAPYLSVVQMDDPVMIQAVEADLLVPITPDAVPNMT DLRPDATHMDGMWCNYVQPWAGVAYNTNMTNGVSSWAALWDPANAGRVVIPSLQNTEG MWTLMSAAMLGSGLPFVDAQYEIDAAFAKLEELKPNLLTVYSTMSQAFNLLEQGEISM LSGNFSSYTLPRKAEGVPVDLAAPAEGIFAMPSGICLVKGGPNPELAQAYVNEMLGPV MQAAIADFASSVPANTTVTAGAIIPDGVPIYSPDWSFVAANRAAWIDRFDKLMAI" gene 26610..27917 /locus_tag="SKA53_00135" CDS 26610..27917 /locus_tag="SKA53_00135" /note="COG0402 Cytosine deaminase and related metal-dependent hydrolases" /codon_start=1 /transl_table=11 /product="N-ethylammeline chlorohydrolase" /db_xref="CDD:28159" /translation="MACHLYNVALLCPTEGFVSNGSLTIRDGIIAARGAAPNPGETVI DGKGAMCLPGLINTHNHSPLMSVRGMVEDLGFAPAYTPGVPQGHWLSSEETQILARLG VMEMLCAGATTIVDYYRMPDALARAAEAFGLRAMIGGRVMDADTASLANGRFLHDPKL GEATLRAALDLIDTWDAKGNDRISTILAPHAPDTCSRQMLHTFADLSAKTGKQVHTHL AQSKMEVAQVRSREGLSPAELLEDVGLLSPDLVAAHCIFLDEADIRRIGKAGVVINHA PIGNAAFGAAAPVIALREAGAKITLCTDTKSADMFEAMRMAIAAARWRADMEFVLDAK TVFGWGTVDAARALKGHAASGTLSVGSPADLILLDPNAPNLRPVIDGYGIVVHSGSAA NVTDVMVAGEWLVKDRMPTRVDMDTVIRDAQKVAENLWKRASA" gene complement(27909..28595) /locus_tag="SKA53_00140" CDS complement(27909..28595) /locus_tag="SKA53_00140" /note="COG1802 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator, GntR family protein" /db_xref="CDD:11512" /translation="MDTPPPRSAPNGDVTAVAQWVADILRDRIIRGVLPAGARIVERK LSAELDVSRTPIREALKLLHADNLIDISRHKGAQVTEFLAQEALELFDVIASLESLAA ERLAERITKEQLATFEDLHAAMLTHYQAGEADAYFDLNSEIHDAILAACGNIILQNLH TKMMARARRGRFMAIMNPDRLKSAVEEHEQLMAALRTQNADAARQIWRKHLLNTGQSV TDVLRSQALG" gene 28861..28986 /locus_tag="SKA53_00145" CDS 28861..28986 /locus_tag="SKA53_00145" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSATDQTTLAVTVITANETEKCDETPARPEKACQKNEAAAL" gene complement(29023..29856) /locus_tag="SKA53_00150" CDS complement(29023..29856) /locus_tag="SKA53_00150" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="Spermidine/putrescine-binding periplasmic protein" /db_xref="CDD:10556" /translation="MRVVPDPARATGTGIVALDGAKAAIAQAVLAGWDIIALDEASEI AACGAGVLQKAPTSETTTADISTRFARRPGQGGAKSGCALTYDTRFEALAYRLDAFVL SPPSTGLAVFDTASFPGPRAVVWPPRALLEWAILAQGVPEVQVYDILSSARGMQIARA AILDIAPSIIWVDSDAEAAQLLATGQVTMAVAGEADLAVTAGIAAVVQAGKIGQRRSW IQLPSGAASSPTLRPADGIVAALAGDQSTYVPALWRDAAWYAQAGAHVATGLAGLGPE K" gene complement(30020..31780) /locus_tag="SKA53_00155" CDS complement(30020..31780) /locus_tag="SKA53_00155" /note="COG0038 Chloride channel protein EriC" /codon_start=1 /transl_table=11 /product="putative transport integral membrane protein" /db_xref="CDD:9913" /translation="MAHVPDTPSSVLGVTPFMMVRRIVTVLTVGLVIGAVTAIAAIAF VEAVLWLNDLLLVSSYAKVQSGLSPTVLLAITLGVPMCGGALVSFIVFRLAPIHRPAG PADAIRAVQLQTSMPDTRSGLLVTLGALGSLGVGASVGQYGPMVFFGAVIGGLVEKLK LAVPNINAIAIACGVAAAISAAFNAPIAGLVFAHEAILRHYSMQAFAPVTIASTVGYV VANVLFERAPVFVVQTGVSLHVPEFAIFALMGLLSGVVSIVYMRTLLAGARIGGRIAL PPEARGAMAGLAVGLCALWLPEITGLGQYTLRFATIQGAFGASEMAMILVGKIVLTAI CLGMGFVGGVFSPALIVGSMLGGLVWTGLTALGMEGLAAFPVYVICAMMAVTSPVIGA PLTAILIVFELTRSYELAIASMVVVVFSNVVAFRFFGRSLFDMQLFLRGCDLSQGRAE AQLSVLAVRDYAVVEAPIFDVSLGQDAVRAELDAHGWSEGYAIDANGLFRGYLRIVDL GEGSPAPVSDILRPAQLMFDADTSVRDAMRLLKDFVGDAIPIVDRDSQHLVGVVTEAA IVRAYLDIVAKLRNEENAGL" gene 32161..32352 /locus_tag="SKA53_00160" CDS 32161..32352 /locus_tag="SKA53_00160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKNTNLSGFTTAQAKSETTMDKTTRAVKQIKDAETKHREDKMA RLRKARHESEAEALGKPIA" gene 32749..33225 /locus_tag="SKA53_00165" CDS 32749..33225 /locus_tag="SKA53_00165" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSSIQNDPSKQSVIREIAYVRAMGAVDHTLRASANLGVYEFILL LLEQGEPGLPLYATLDRVKSRYTTRSGMIKRIAELRKQGLLIERKGKKQSEVLLQPSQ ELVDQLLPILGIRGDAQRVNYSGVTLCQIPDESKEMRISTILSADTKSSLTLLRQA" gene 33235..33600 /locus_tag="SKA53_00170" CDS 33235..33600 /locus_tag="SKA53_00170" /note="COG2188 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKSPIEKELERLRYLAATKSLKVFIKYPEYWELMLLIAINENNQ EIGIEDYLDNIATMQVNRVTVRNFIKDRVAEGTIISRQGEKKSRRMLTLSDKVTEELK DYFQYFHIKINQFAPRDEK" gene 33663..35033 /locus_tag="SKA53_00175" CDS 33663..35033 /locus_tag="SKA53_00175" /note="COG1538 Outer membrane protein" /codon_start=1 /transl_table=11 /product="agglutination protein" /db_xref="CDD:11252" /translation="MHFCSHRLNLLNALAISTALASCGQSPDDIATMRVVIDEQILLD SQDVEATAAAPLPFAQFEAALLLAVSQNELYRAALAAEIAAKAQVEVASSGTRPQISS SLNAGLIQDASSNNGDVEKGAIAGVNLSQLIYDGGETTANINRANAEVLIAEADRMVR GNDVASRASQAWVDVWKHQSRAELLASRLTKLNELVGQIERMAANGMVDRSVVDSATR ERLEFEMVDLNIQADLQDAELRFERLFNTSPARLRLPENVLTATDIMAAASAPRQAPE LQLSAAELIVARSAVARAEAGFEPRIRLQAGLRSPVDQQDDANGSLGVVVEYVIGDGG RRQSQLESATAQMQRSEAQFTASKQAFETELNISVARLDAIERSLPVVTQREALAAER IETLQSQLATGQTGLSQLIDAEIELYRVRDQLVTMRAEREILFLTTGARLGLLARQIG LLDADS" gene 35113..37317 /locus_tag="SKA53_00180" CDS 35113..37317 /locus_tag="SKA53_00180" /note="COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain" /codon_start=1 /transl_table=11 /product="ATPase" /db_xref="CDD:11980" /translation="MQGFQSNQQETEDADQADHQVESRANGADTPDVAGAPDVETAQS FDEMSLILAVKFILAKTGFSFSTAAVRDLAELSSDVFGPRAAVSAFQHLNFEANFGEM PVTALKQNHCPAIGFTHGDQAVVITSVEKDGAIEIVRFNKDMSQTVERVQKSDRAGLL QPHFVLCRKMHVSVKPKGKNDWFFGSFLQGKWLYGQVIIAAALTNFLGLSTSLFIMVV YDRVVPNQAIESLIALTIGVMLALGFDFIIKTLRSQFVDRAGKRADSRMLRLIFDKIL NMKLDHRKQKAGAMASIVREFDTLREFFTSATLIAVVDIPFIFFFIWIISLIAGPLAI VPLIAVPLVILSGLVIQPFLALNTKNAMQSNMSKQSVLVETLNGLETVQATGSGRLMR RRFEEAADAQSELGLKSRMLSQFAINSAASIQQFAQIATIFYGVFLIQDGVITMGAMI AAVILGGRTLAPLSQLAAAMSRANGALEAYRSLSSVMASSKDDPDDTVQRLSRPKMSG SVELRDVSYSFPGSNNPIIKNLSLKIEAGEKVAIVGRMGSGKSTVSRLISGLIVPSEG AVLIDGVDVRQIDKSDLRRNLGIMLQDTWLFSGTIKENLQMGFYEYDDAHILEIAKIS GVDDFVASDPRGYEMELKERGEGLSGGQRQSINLARALLHDPAVVVLDEPTSSMDTVT EKGVVERLKRWSGDRTVIMVTHRNSLLELADRVLVVDRGSIVADTTPDRIRS" gene 37337..38647 /locus_tag="SKA53_00185" CDS 37337..38647 /locus_tag="SKA53_00185" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="Type I secretion membrane fusion protein, HlyD" /db_xref="CDD:25537" /translation="MSSINFKALSRDMAGREGLSGSTILATIVVLVVSIGIWANWAEI DNVTRGEGRVISSVQNQLVQAAEGGVILRRFVSENTIVAADEILFEIDPIDSSSELNR LNQRLTGLDVKESRLRAEIEGSEFDPPNHVSAMSPLVTLTEQSLFAARRAELAGRIAV LEQRLQQRSQDLVAAENVSGTAERTVALLQEEIELVEPLVRDNIVPATRLLELRRQME QARGDGERAAVSIAQAGSGMAELEAEIANARDNYTLRAMDELNDVVAEQSELREALPK LEERVSRTIIRAPMEGIVSRLNFRTPGGFVATGDVMLELVPTGEALVVEARIMPQDIS RIRLDDDVRIRLSAYDSSKYGSVAGRVIEISPDAVADEQNPNAASSYLVEVAIEGELR VDSGEIVTLIPGMTATVDVLSGKRTVLEYIWQPVAKIQELALRD" gene 38898..41396 /locus_tag="SKA53_00190" CDS 38898..41396 /locus_tag="SKA53_00190" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNKIVSTDFITDDVQRLVPVDATATTPKNAAVAKLMKAWEAKTT QRTAKGAGLTLMALSLAACNDDNTTAAAPTTPTTPTTPVTPAGQTFTLTPLVDIASDT TALTGSAASTFRFTGADEVVNGMTATMAATDTLLDGSTTDNDVLNVTLTGATTITTMN IETINLSYVVAAADFTGANTGTTTYNVSGAVAGVLSTPASAATIALNDYDRVLTVEGL TLTGTTAAGSAESMSIALSGASYGTTAATQTGVTIDGTDGEQLETLNIASNGSSANSF ALAFQSTETVGTYTITGAQDLTMRVADAKVSGTTINATGNTGTVAISLDTGSGITVSA ANWTGVDNIVLRDSDTTAGAATLNSTASGQNVVVANSVSTLTVAATGATYTAPAAAAS LELNGTSTTSGVTVTTYAVQNATALNLSSLGLASSTSTTAANTISNLDGDFTRINITG DTSLAITDLDIEATETATTATTARAVVLDASAMTGNAFVNITASADSKVSYSITGTAG ADTIVMNQSGGTVISGAGNDTVTSGNGADTVSLGAGTDTYNVSFGVDTLTLGAGNDTV DIDAATASAVAQVSTVVNSTATYTHVGTVSDTISVTINGTVYSTTIGAAGGTADIAAA SSLSQFITEHATDILTAHGISVTNVVASTATDDIIATGKADGTAFTISARTVDASNSN AQADLTITATTEGSAAKDVATTITDFVAGDIINTVGLTALGTGGYVEGLANVSNVTEH GVIVITDASYASVAAAEDALQTKTAATTGDVTTTTAGIVVFLNSTTGTAQAFLDNDID SDGTLADSTVVFTFSNITNLTDLASIMSADSFVI" gene 41547..42428 /locus_tag="SKA53_00195" CDS 41547..42428 /locus_tag="SKA53_00195" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MPRYELITKTGFAAQAWRRVDSYAFAATDAVAPLVVQELAKACM SLPIAFIQQNDAFVPHAVQGLEPGRNLFVVNGTWVTPYTPAVYRGYPFGLAQGDGDDL HLCIDMDSGLVGAGEGFDQPFFDEAGEAAQPVKDALNFLQQIHRNRAVTQRVCAALAA EDLFQPWPLTVQSPDGERRVDGLFRIDEARLNSLDPDALARVQKAGGLAVAYCQLLSM GNIQTLGLIQRKLAEVKTRMPEMSDQIDVDGILQRHKSSEPEQTLEPVSNDNVVNIAS DEGDFDLSAFVKAKQDD" gene 42500..42703 /locus_tag="SKA53_00200" CDS 42500..42703 /locus_tag="SKA53_00200" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDTKAATITIDDKAYELTDLTEAARAHIANIQFVDAQIRQLNN EWAVCDTARMAYEAAFKRELAKT" gene 42754..42951 /locus_tag="SKA53_00205" CDS 42754..42951 /locus_tag="SKA53_00205" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPKISVDGTEYDTENLSVNGKAQLASLQFLEVQMQKLKNEIAVY QTARAGYAAALNNELAKIEAA" gene 42956..43237 /locus_tag="SKA53_00210" CDS 42956..43237 /locus_tag="SKA53_00210" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILAVGMIGAAAMLSAYSPMAVAQTQPAPDTNTVLNTG TDALLTMPLLADKGWFVHAYGGRVRACTADGASVAGERPAPKCSQWSEY" gene 44603..44956 /locus_tag="SKA53_00215" CDS 44603..44956 /locus_tag="SKA53_00215" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNDKFLECGRLWQLGPDWRGQRCGAKTRAGTPCKNPAVTGKARC RMHGGKSTGAKTAEGRAKLSALHLKHGRSTTAAKAEAKRRAQVGREIRAELRDIEREA IAGGWLAKTWKDQFE" gene complement(45158..46273) /locus_tag="SKA53_00220" CDS complement(45158..46273) /locus_tag="SKA53_00220" /note="COG1066 Predicted ATP-dependent serine protease" /codon_start=1 /transl_table=11 /product="RecA-family ATPase" /db_xref="CDD:27817" /translation="MTENSQLQELLAQAMPNQAPPPRNLFPFVVSATELMKRDMPPKQ MLLSTFMPRSSFGMVVAPRGIGKSWFSLALGVAISTGQGVFLGWKIHQQTRVLYVDGE MQTIDIRDRIKALSGGQELDSLDILPSEELYQEGRPVCLDDRTEQSQIEAMLNALEAE GRRPGLIILDNLSTLRRGVDENSNTETQSLVDFLVKLRHSTYAVLVVHHTNKAGKQRG ASIIEVPMDYVIELKKPEGGAIFHQGANFELSFSKIRGRAPENANFVAVLDEDADGKL AFSVDHAAFEVSDDIMVLRVVAESQKIPTQRAIAAKVGCSAGKANKVIQKLAKDGMIE KDARGTRLTDYGRYALHEAFPDRYDPPPNPERFQIPF" gene complement(46270..47052) /locus_tag="SKA53_00225" CDS complement(46270..47052) /locus_tag="SKA53_00225" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSDMTPLEVALMVAGTTGYRVFPSNQQKKPCVKDPFGRATNDKA GIEELFGNFPNAMTAIPTGPINGVTVVDLDVKGGVNGIETLRGLIDDLPPTMLVRTPS GGIHLYFRTGSEGLPSSVGKLGPGIDIRGSGANAISFGSTSQKGMYRWDHSVSGFTWR PAPMPADLKRLIYAATPSSGTQTTNGYTRSDVGERLTTPIVTGQRNSELASRIGYLLK VYSPQEVHDLAHHMNKTLMTEPLILKEVDEVFCSILKRELRK" gene complement(47049..47636) /locus_tag="SKA53_00230" CDS complement(47049..47636) /locus_tag="SKA53_00230" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMSKQTKAALIAAAQQAYDWSGAFPAACLPGVAPLSQGAPAQSE AQMVRDFKRHKKGLVGLRSSSKGLAILLRNVPVGVDRPSELARRFFDPDRYLVTRTKT VDLAAGRITLIDTVVIKSPFGFPLGMRTKDPSIVLVPDDSWALFSTAGETVIGFQRAS LAMSLQQLNGGTFTNRDIMELSPDDWATLLGRDAA" gene 47635..47823 /locus_tag="SKA53_00235" CDS 47635..47823 /locus_tag="SKA53_00235" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKTSDIGAPFLVGREPCFEITLAPADDAFADGDTRRHAALTVQI ADMPRAAAQKFGYLIDAK" gene complement(48343..48666) /locus_tag="SKA53_00240" CDS complement(48343..48666) /locus_tag="SKA53_00240" /note="COG2944 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family" /db_xref="CDD:12292" /translation="MGVYKTDGAAPAGRIDVSRVDATTEAEIKRHMLEDDLAALADAG DYARQIRRRLGLTQVQLATKLDVPIDTLRNWEQGKRYPTGPAKALLKILDRAPEAALA ALNGA" gene complement(48647..48922) /locus_tag="SKA53_00245" CDS complement(48647..48922) /locus_tag="SKA53_00245" /note="COG2929 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12278" /translation="MEFEWDDDKSEACLRQRGFDFAYATQVFFDPGRTVLPDDRMIYG EVRYQVYGTVTGRLFVVVFTQRGGRFRIISARKANQREVKRYGRLQN" gene complement(49080..50285) /locus_tag="SKA53_00250" CDS complement(49080..50285) /locus_tag="SKA53_00250" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Phage integrase" /db_xref="CDD:27722" /translation="MPAVELTSTLVATVVCPDSKRKEVFFDRRAKGLALEVRISGGRT YYLRYSDDRSKTRYIKLADAGDVTLPQARTLCERMRNKIAMGVDPLKERAGKKLVPTF EAFAWNSYMPFSQANKRSWKTDETLIRTHLIPAFGKKHLDEITTEDVLSMQQAGLKAG AAPGSVNRRLILLRYMFNTAWRDWKIAGVKENPTHGVRLLKENNKKERYVRADEMARL YAEICSSQNTMLKHVVAFLLLTGARRNEVLHATWQDINLTTGKWRIPDTKSGYARHLP LNDGAMAVLHQMQGVSRSQYIFGNPKTGKPYVHIYYAWDTARRRAGLPDVRMHDLRHT FASLLINNGRSIYEVQKLLGHTQIKTTQRYAHLTQETLLDASNIGTAAMAATLGMGSH GDVIEGRLC" gene 50343..50636 /locus_tag="SKA53_00255" CDS 50343..50636 /locus_tag="SKA53_00255" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:16530" /translation="MSSRTDEMKISIVLRAARSGLGISQADLASELGVSQSTITRCER GAGSFPANILLRAISFFRAHDIDITGVLEDNPTVVFRSQMFETLEKNRETSPD" gene 50923..52983 /locus_tag="SKA53_00260" CDS 50923..52983 /locus_tag="SKA53_00260" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSATLSGGLATSTITNVENLVLTDLAAGEVVFSTSSATYISGVQ SVKYVQSAGDITLTRIVDAASVTLENVVDDVTITFADTVLAGTNDTFTLNVSGFVLAG GDGFENIDVGSVSDTDGDIETLVINATGAASDFNDLDSAFVEVSTVTVTGSASVDFGA TAAFTSLATFNSSASTGGMTLLLGADGVSGTTNAKTLTFGAGADALDLGVLAPADIGV LTVDMGAGADTVDLDDYADTTMIISGGEGTDTLVSAAVITAANATTISGFETFELGAN AGTQVMSDLATGNTFTTLTAGAATTTFTNVGAAVTTFNLKGGVATTAATLTKLIDGSA DSLTVKATTADAGLTGDLSIDEIETVTFDSSAFNLVVAGDITSTDLTSVTLVGTNLIT LGANGTKEFSSTKIATLNATGVTGTEAVNVFAINNTVAMTVTGPASTGTFTLDTGSGA DIITAGSGILDVDAGAGDDTITGGALADVLEGEAGNDTITGGEGADYIGGGAGVDTIT LTETTVLADEVELSVGAANYDNIIGFDFGGTATDDNLSALDATFAWLGVGAATNNDGA VALSTGASIKAAEVADDNATVLTISTNVAGGTFAAFMAGTMTEATMEANVITALGLTG AMSTTDVIMVLVDDGTHTGVFKFTGADAATDDAVDAAEIEIMAVLNGVSDATSILAAD VLFA" gene 53212..54093 /locus_tag="SKA53_00265" CDS 53212..54093 /locus_tag="SKA53_00265" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MPRYEHITKNGFAAQAWRRHNSYAFAGTDAVTPLVVQELAKACM SLPIAFIQQNDAFIPHAVQGLEPGRNLFVVNGKWVAPYTPAVYRGYPFALAQGDDDQL HLCIDMDSGLVGAGEGFDQPFFDDAGEAAQPVKDVLNFLQQIYRNRAVTQRVCAALAA EDLFQPWPLKVQTPKGERRIDGLFRIDEARLNSLDPAALARVQKAGGLPVAYCQLLSM GNIQTLGLIARKLEELKTRMPEMTDQIDVDGILQRHKSSEPEQTLAPVENDNVVNIAA DTGDFDLSAFVNPKQND" gene 54165..54368 /locus_tag="SKA53_00270" CDS 54165..54368 /locus_tag="SKA53_00270" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDTKDAKITIDEQEYAVADLTEAARANIANIQFVDAQIQQLNN EWAVCDTARMAYEAAFKRELAKA" gene 54422..54619 /locus_tag="SKA53_00275" CDS 54422..54619 /locus_tag="SKA53_00275" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPKITVDGIDYDTENLSVNGKAQLASLQFLEVQMQKLKNEIAVY QTARAGYAAALQNELAKIEAK" gene 54624..54884 /locus_tag="SKA53_00280" CDS 54624..54884 /locus_tag="SKA53_00280" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILAVGMIGAAAMLSAYSPMAIAQTQPAPNSGTDALLT MPLLQDKGWFIHAHGGRVRACTADGASVAGDRPAPKCSEWST" gene complement(55120..56457) /locus_tag="SKA53_00285" CDS complement(55120..56457) /locus_tag="SKA53_00285" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Phage integrase" /db_xref="CDD:27722" /translation="MPVIDLTAQFVASAVCPSTKRKEVFFDRRVKGLVLEVRTSGGMT YYMRYTDDRSKTRYIKLANVGDITLPQARGLCRQHRNKLALGIDPLAERAVKRLVPTF GDFVRERYLPFAQANKRSWKTDETLARTHLTPQLGTMHMDEITIEDVLSLQQIGLKAG AAPASINRRLILLRYMFNLAWRDWKIAGVTGNPTHGVRLLKENNQKERYVRAEELALL YRAVKESQNKMLQHIVAFLLLTGTRRNEVLHATWEDVDLIKGMWRIPQTKSGFARHVP LNDGAYAVLQQMQGRSQSHYIFGNPKTGKPYVHVWYAWNSARVKAGLPDVRLHDLRHT FASLLINNGRSIYEVQKLLGHTQIKTTQRYAHLTQETLLDASNIGTAAVAATLGMVPQ RNVIEGDIYDAVELAPDRQAGNRRRAAISTGSEMPNAAIGQVLDPGSQMHPAG" gene complement(56653..56820) /locus_tag="SKA53_00290" CDS complement(56653..56820) /locus_tag="SKA53_00290" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILAVGMIEAAAMLSTYSPMAFAQTQPAPNSGTDAPLI MPLFTPKAANH" gene complement(56825..57022) /locus_tag="SKA53_00295" CDS complement(56825..57022) /locus_tag="SKA53_00295" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVKITLDGIKYDTESLSVNGKAQLASIQFLHVQMQHLKNEISAY QTARFGYATALKAELAKVEAK" gene complement(57070..57273) /locus_tag="SKA53_00300" CDS complement(57070..57273) /locus_tag="SKA53_00300" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIDTKDAKITIDDKQYMIADLSEAARAHIANIQFVDAQIQQLNN EWAVCDTARMAYTAAFSREMQNA" gene complement(57342..58223) /locus_tag="SKA53_00305" CDS complement(57342..58223) /locus_tag="SKA53_00305" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MPRYELITKSGFAAQAWRRHNSYAFAATDAVAPLVVTELAKACM CLPIAFMKQNDTFVPHAVQGLEPGRNLFVVNGTWVASYTPAAYRGYPFALAQGEVDQL HLCIDMDSGLVGAGEGFDQPFFDEAGEAAQPVKDALNFLQQIYRNRAVTQRVCAALAA EDLFQPWPLTVQGPDGERRVDGLFRIDEARLNSLDPEALARVQKAGGLPVAYCQLLSM GNIQTLGLIARKLDEVKNRMPEMSDQIDVDGILQRHKANDNLDSLETDNDRNLVNVVA DEGDFDLSSFVNSKHRD" gene complement(58452..60353) /locus_tag="SKA53_00310" CDS complement(58452..60353) /locus_tag="SKA53_00310" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="S-layer protein RsaA" /translation="MSLTAGLDTIVGGAGDDTVSGLVDAQTPASSTLNAADNINGAAG SDTLKITTQGTTAITDATNGAAITNVETVEIRAVSTAGVTLSGANLPGVTLINNNLST DALTLTNLADTTAIQVTGNGVATNGATTATYVAAATSGELTITGGVTAGAIAVDGTGL TSLSITSSGAANTTGAISTTGTPTAVTINASTALTTTGLTVGANAAAQTLTITGAGTV TLGTLDADFATVTASANTGGVVATLSTLVTGATTGSAGNDTFTTAAVLTTGSVNAGAG TDTLVVAASAQLASATLGAKYTNFETLNVADGVSVDLDNIAGITAVGITAGGAATGVT DLTATQAAAVTMIAGNATTTIGVKGATTVGQIDTVKITYSDGDSTLNEDINGAASNLT LAGVENLEVTSVDAAEIVQSAATSGSLTSVKLFGAGNHSFTTGNMATSNFTLDASGST GTNTLSAATFATNGVAITGGSGADTITGSGQADVIIGGAGNDTITGGDGTDTVTGGAG ADTFAFAAGDNAGADGAAVADIITDFVAGTDKLQFGNTDIVSAQQSAVQAAVTALAAG STDAQIATAMVAANTTVEGVSFAVFNGNTYVYVETTADALTHVEANGIFIQLTGVTTL PLFATDVIA" gene complement(60445..60699) /locus_tag="SKA53_00315" CDS complement(60445..60699) /locus_tag="SKA53_00315" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGISKSKLARAETAAGSISSGDLEYALSVFRSAGVMIDLTIEGD LRLTVPDNKLHLIEAAITAGMGADGSFDEVASDPKTSNPK" gene 60860..62065 /locus_tag="SKA53_00320" CDS 60860..62065 /locus_tag="SKA53_00320" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Phage integrase" /db_xref="CDD:27722" /translation="MPKARLDSQFVSHADCPEGKRKQTYFDTSTRGLCLEVRISGGRT YYLRYSDDRSKTRYIKLADAGDVTLPQARTLCERMRNKIAMGVDPLKERAGKKLVPTF EAFAWNSYMPFSQANKRSWKTDETLIRTHLIPTFGKKHLDEITTEDVLNMQQAGLKAG AAPGSVNRRLILLRYMFNTAWRDWKIAGVKENPTHGVRLLKENNKKERYVRADEMARL YAEICSSQNTMLKHIVAFLVLTGARRNEVLHATWHDINMTTGKWRIPDTKSGYARHLP LNDGAMAVLHQMRGVSRSHFIFGNPKTGKAYVHIWYAWNTARKKAGLPDVRMHDLRHT FASLLINNGRSIYEVQKLLGHTQIKTTQRYAHLTQETLLDASNIGTAAMAATLGMGPH GDVIEGRLC" gene complement(62141..62527) /locus_tag="SKA53_00325" CDS complement(62141..62527) /locus_tag="SKA53_00325" /note="COG3744 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13064" /translation="MKLLLDTHILLWAAYTPDRLSAKAQAMIADTGNSLYFSVASLWE VAIKASLGRDDFRVDVAELRLGLVANDYAELAIESAHVLRVPTLPPIHADPFDRILVA QAMAEGFVLVSNDAKLKAYGGPVWDV" gene complement(62524..62763) /locus_tag="SKA53_00330" CDS complement(62524..62763) /locus_tag="SKA53_00330" /note="COG4118 Antitoxin of toxin-antitoxin stability system" /codon_start=1 /transl_table=11 /product="Prevent-host-death protein" /db_xref="CDD:13400" /translation="MKTINIHEAKTHLSKLVEAAAKGEAFVIAKSGRPMVKVTMLEGQ LQKRLGFLAGKGTVPVDFDEMSADEIAQMFAGTEA" gene 62888..63523 /locus_tag="SKA53_00335" CDS 62888..63523 /locus_tag="SKA53_00335" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDLKMPKKVSPLNKRKGFVGIDPDQSLNEILELISDRPCPAVCS KFYPDRGHFYMLHRWLACLLLEEGLHERKATPELELAQEHLCHALLCLANNKQADYLS PDRKSGPRHHDDNVREATLCAAARFNYAQLIGLHKGVERWWATIVRKSDPLYKLPTNL GKLIGNVEQGNSIADKSTLLSFYACFIDATPNEAEQHSLLLKEHVERILLP" gene 63779..64693 /locus_tag="SKA53_00340" CDS 63779..64693 /locus_tag="SKA53_00340" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAHRADGGTVMEFEINMQLLSTPADLSLRDKKALAAASWVRMGI DIILVEHGIPIKDTRSRAERMSPVDTYFYVLEQPEQINIALRTGPKTGLVALSVYTDA PGVGLHTLEERGFFCPQDDPLIRHETITRGQSQGRFHTVLFYSGKDQFLETGLDDLPG VYVRSSGELILLPPHELNFDSEFGLVARSIYECDDILAPVAIPYLPDGLRKMIRAAER QALADKRKPKLRGGVLPELYTPVAEGGRNNALARRAGFLLGVRKLTEEQTLKELLDIN QRCCQPPLGLCEVRNIARSIAKKHHRHG" gene 64686..66596 /locus_tag="SKA53_00345" CDS 64686..66596 /locus_tag="SKA53_00345" /note="COG5519 Superfamily II helicase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="DNA primase domain protein" /translation="MDDRTSLVAQLRADSEAARQAAEVAEAALEAQRQYADFGGALHM LKVTREKQAIPVRLCNFTAEIEREVVKADGLTTARHFTVSGRMETGNPLPTIDVPASE FDRLEWLATEWGASPQIFVGSRYRDHVAAAIKERSDPELVQLCQHTGWAKFDDELLYL TASGGIGTEGLNEEARCELQGSLADFSLPAPADPRTLGLADLLGAFRDVQKDGVGLVL LGGVMRATLCHFMPATLSIYLQGTTGTFKSAFAGVLQGFWGIKFDGANLPANWSSTGN ALEKTAFLAKDALLIVDDFVARGTRHEVAKTHANAERLLRAQGNQAGRSRMTSKAELR NAFHPRGIILATGEDIPNGHSLQARLVIVNVARGAIDTTVLSGLQKLARDGVLAKVMA SFVQWLAMESKRNALHEFIGMALEIDRENIGASGHARTQDNLANLLMGLRVFLDFADD AGEISSQVTQGFMDIAKDAACTLADLQAAIDHEASDAQRFVDLMRAAVSSGKAHIERS SGGKPDNARALGWRDVDIGQSGIRTEAMGTRIGWVDGEELYLDPTASLSVIKALASGL DNHLGSSERAIAKSLREAGLLSRCDKSRNTTKVSVLGARRSVYVFRMADIFDLDSASA SPIGYDDADIPF" gene complement(66808..67176) /locus_tag="SKA53_00350" CDS complement(66808..67176) /locus_tag="SKA53_00350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGISFKEAAQMWQFGPDWPGQACGAKTRAGTPCKNPAVTGKARC RMHGGKSTGAKTPEGRARLSALHLKHGRSTTEAKAEAKRRAQVGREIRAELRDIEREA IAGGLLAKDWREMFEPKPDK" gene complement(68771..69040) /locus_tag="SKA53_00355" CDS complement(68771..69040) /locus_tag="SKA53_00355" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTITAAILASGMIGAAAMLSAYSPMAIAQTQPAPTPATGTDAL LTMPLLEDKLWFIHAYAGRVRACTADGSSVAGDRPAPKCSQWSAY" gene complement(69045..69242) /locus_tag="SKA53_00360" CDS complement(69045..69242) /locus_tag="SKA53_00360" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKITVNGIDYDTENLSVNGKAQLASLQFLEVQMQKLKNEIAVY QTARAGYAAALQNELAKIEAA" gene complement(69293..69496) /locus_tag="SKA53_00365" CDS complement(69293..69496) /locus_tag="SKA53_00365" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKKTKEPVITIDEKEYAIAGLSEAARAHIANIQFVDVQIQQINN ELAVCDTARMAYTAAFSRELAKA" gene complement(69568..70344) /locus_tag="SKA53_00370" CDS complement(69568..70344) /locus_tag="SKA53_00370" /codon_start=1 /transl_table=11 /product="SAPC family protein" /db_xref="CDD:27384" /translation="MTELAKACMCLPIAFIQQKDAFVPHAVQGLEQGRNLFVVNGKWV APYTPAVYRGYPFAVTEGEDDQLHLCIDMDSGLVGAGEGFDQPFFDDAGEAAQPVKDA LNFLQQIHRNRAVTKRVCAALAAEDLFQPWPLKVQTADGERNIEGLFRIDEARLNSLD PDALHRVHAAGGLPVAYCQLLSMSHVQTLGLIQRKLAEVKNRMPEMSDQIDVDGILQR HKSSEPEQTLEPIENDNVVNIAADEGDFDLSAFVNPKQND" gene complement(70529..73258) /locus_tag="SKA53_00375" CDS complement(70529..73258) /locus_tag="SKA53_00375" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNAGDSVTGGAGADVLAVFSSAAATLGGFVVTGVETISASSNSA TATDVLSLNLGSVTGETDLRVTGSSSSVTFTNTDNIANLTLSYNSAGNVIVAYNTSTI AGTADVQSLTTTDATNGVVTLAGIETVNIANSGVSTIATLTTAAATTVNVTGSGTLTL TDIDDVTTTLNMSAFTGTSVTGGYGAVNIAVTGGTGNDTFIVDMANITSLDTITGGTG TDTLRINDSMTTAADVAGITGIEVVELRNTGTGANDDTVDASIFATASINIRVADTND GTNAELVTVSNAGSTQSITMTDSTETEVNDANDGVSLTVTQKAGVGGSTDVLNLTLSG ETVLAVTANEYETINIATAGTVASSVATFSATTAQNIVITGSQALTLTAVDMEEQAAS PLATSKIDASAFTGALTLTVTNDEGDQIITGGSGNDTFTLGTSSLDSDDSIIGNGGTD TLVVTNFTGAAGEVNIDVERLTLELTTGAASSIDLRNATSLQRVTVDLDATDENITVS NIASSAAVILQDTTAADTDVVILSGITGDTDLTVTFSDEAGAADFNAALTANYDNLTL ATNDSADDITVAVLSATTLDNLTLTGAGDITISSATNTTSLDVLNASGVTGAITLTSL ARDGSAVITLGAGNDSINLVTTSHAGNTIAAGAGTDTLVISGASTSNIVINLASTTDQ ITNVSGAANSAAQTGFENVNASSVTVSGVNVTGSTVANTVVGTAQADTITAGTGALTV TGGAGDDVITLGSSVDTVVLTATAASASAGGADTIVGFTAGTGGDVMDISAFIGAAFT AANFDSATNATGDGALDDLHVERVEYAGNIAGLNFGTAGAANFDLVFGTAVYLSTDDN SAKTIIAVQGDDQTHIYTQTDPGGALIDAGDITLIAILSDVTNATDLVAANFA" gene 73819..75024 /locus_tag="SKA53_00380" CDS 73819..75024 /locus_tag="SKA53_00380" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="Site-specific recombinase XerD-like" /db_xref="CDD:27722" /translation="MPKATLDTQFVSDAFCPEGKRKETYFDTSMNGLCLEVRISGGRT FYLRYRDTRGKTRYAKLADAQHVTLHQARTLCGRMRNKIAMGINPSAEKSIKRQVPTF GDFAQDRYMPFSQANKRSWKTDETLIRTHLIPTFGKMHLDEISTEDVLNMQQAGLKAG AAPGSVNRRLILLRYMFNLAWRDWKIAGVTENPTHGVRLLKENNKKERYVRAEEMARL YDEVCGSQNIMLKHIVAFLVLTGARRNEVLHATWHDINMTTGKWRIPETKSGYARHVP LNDGAMAVLQQMQDVSRSQYIFGNPNTGKPYVHIYYAWDIARRRAGLPDVRMHDLRHT FASLLVNNGSSLYAVQMLLGHTQIKTTQRYAHLTQETLLDVSNIGTAAMAATLGRSLH SDIIKGRHC" gene complement(75036..75101) /locus_tag="SKA53_00385" CDS complement(75036..75101) /locus_tag="SKA53_00385" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFDREEGQTFLPGPLAAMVAL" gene complement(75825..75898) /locus_tag="SKA53_t00544" tRNA complement(75825..75898) /locus_tag="SKA53_t00544" /product="tRNA-Arg" gene complement(75959..77359) /locus_tag="SKA53_00390" CDS complement(75959..77359) /locus_tag="SKA53_00390" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /db_xref="CDD:10512" /translation="MVNSLSGRFLILTIIFVMIAEIFIFVPSVARFREDYLRARLERA QIASLAVEVDAMISPALEAELLENAEVYNVVLRRDEIRQLALSSKLPAPIAATYDMRA PSGVTLIADALGTLVQKEDRIIRVIGNPVRDGGQLIEITMDERPMQAAMREYGRNILI LSAFISVMTAGLLFLSVQILLVRPIKGVVAHMQSYAKAPEDARQIITPTARVRELRDA EVALQMMQTQLTGALRQKERLAQLGGAVAKVSHDLRNIMTSAQLFTDRIGGSDDPLVK RMAPKLVNSITRAVNLCETTLAFGRVDEPAPALTRVNLSRIVEDVIDSERLAAGDYPL SFAEDIPATMTLRADGEQLYRVIFNLVRNARQAIMATGEPGEIGLHADEDELIWRLTV RDTGPGMPQKAREHLFQPFQGGVRKGGAGLGLVIAADLIRGHGGRLELRDTGARGTTF VIQLPKADLALADTAQ" gene complement(77375..78793) /locus_tag="SKA53_00395" CDS complement(77375..78793) /locus_tag="SKA53_00395" /note="COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /codon_start=1 /transl_table=11 /product="mercuric reductase, putative" /db_xref="CDD:10966" /translation="MNRITTDICIIGAGSGGLSVAAGAVQMGARVVLIEGHKMGGDCL NYGCVPSKALIASAKQAHMMRHGAPYGIGAVAPTVDYAAAKDHVADVIATIAPVDSVE RFTGLGVHVIQDYGRFISKTQVQAGNTIITARRFVVATGSSPLVPPIPGLADVPYHTN ETIFDLREKPDHLIIIGGGPIGMELAQAHRRLGCDVTVVEGAKAFGKDDPETAAIVLD SLRAEGVVIMEDAQAEKISQKDGKITVQTAKGDVTGTHLLIAVGRKVNTDTLDLQKGG IAYDRQGLKVGPNLRSVSNRRVYAAGDVAGGLQFTHVAGYHASVLIRSLLFALPSRQR TDHIPWASYTDPELAQVGLTEAQARKKFGSRLEVVRFDFHHNDRLIAERKTKGLIKVM VVSGRPVGVSMAGHLAGELIGIWAMAIANRMKMSAIAQTVLPYPTVGEVNKRAAGAYF SPRLFQNPKVKRVVGLVQRWLP" gene 78856..79044 /locus_tag="SKA53_00400" CDS 78856..79044 /locus_tag="SKA53_00400" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAGRVTCVLLDGVFQGAGIATSRGIDAKQADVSVYDPESCAKLQ AGTASALTASHAPSKEQV" gene 79102..79236 /locus_tag="SKA53_00405" CDS 79102..79236 /locus_tag="SKA53_00405" /note="COG0230 Ribosomal protein L34" /codon_start=1 /transl_table=11 /product="ribosomal protein L34" /translation="MKRTFQPSNRVRKNRHGFRARMATKAGRKILNARRAKGRAKLSA " gene 79253..79645 /locus_tag="SKA53_00410" CDS 79253..79645 /locus_tag="SKA53_00410" /note="COG0594 RNase P protein component" /codon_start=1 /transl_table=11 /product="ribonuclease P protein component" /db_xref="CDD:10464" /translation="MSVLKPPAEPDTGAPAVCVCLTVLTKRADFVRASHALRQGTPGI HLQARERARGEAAGIRVGFTCSKKVGNAVARNRAKRRLREVARQVLPEQGRDGWDYVL VGRHDVTASLPFDALVADLRRALRKVHA" gene 79642..79863 /locus_tag="SKA53_00415" CDS 79642..79863 /locus_tag="SKA53_00415" /note="COG0759 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:2337" /translation="MTPFAYILSLPVRAYRLIFSPWVGFNCRYHPTCSAYALEALEKH GAIKGGWLAFRRILRCHPWGRSGIDNVPD" gene complement(79860..80399) /locus_tag="SKA53_00420" CDS complement(79860..80399) /locus_tag="SKA53_00420" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLITLATLMLLAACTGKPSFDDPALSDRQLNLEEFFDGDLVAH GQFQDILGTVRRSFVVTIAGDWDCERLRLVEDFTYEDGATEQRIWTLVKTGDDTWDGT APGVIGTATGLEQGDRFNWQYEIDLPVPSADGTAETLRVTFDDWMWLLADDRLLNLAY VKRFGFDIGTVTISFEKLD" gene 80487..81338 /locus_tag="SKA53_00425" CDS 80487..81338 /locus_tag="SKA53_00425" /note="COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9912" /translation="MLDETEIHPLFEGAPTTTEFKKLRKRIVRQTREAITQYGMIERR SDGTVPKWLVCLSGGKDSYTLLAVLYELKWRGLLPVDLLACNLDQGQPGFPATVLPEF LARMGVPHRIEYQDTYSIVMDKVPAGRTFCALCSRLRRGNLYRVAREEGCSAVVLGHH RDDILETFFMNLFHGGRLATMPPKLVNEEGDLFLYRPLAHVAEVDCEKFAQAMQYPII PCDLCGSQDGLQRQQVKQILDGWERNSPGRRQVMFRSLMNARPSHLLDPKLFDFAALT LDAPHKD" gene 81500..82408 /locus_tag="SKA53_00430" CDS 81500..82408 /locus_tag="SKA53_00430" /note="COG1940 Transcriptional regulator/sugar kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11648" /translation="MMALGVDLGGTKIEAQVFADDWHLHERRRVATPASYPALVHALV DLVGWADGLADGPVSVGIGAAGMINPRNGRVLAANLAAHDKPLPADLVAALGRPVRYL NDSHALALSEAVFGAGQPFASVFALVLGTGVGGGHVRDGRLQTGFSGTGGEVGHLPAP AHLVQAHGLPVVDCACGRRGCIETLISGAGLARMAHAMTGETLSAPQIIAARGDDPRM AQLWQVWCALTADLVQTLMRTLDPDCIVLGGGLSDIPVVVDDLTRAVGQAGFAGFDSP VILRAAGGAASGARGAAYAGWQVADG" gene 82401..83537 /locus_tag="SKA53_00435" CDS 82401..83537 /locus_tag="SKA53_00435" /note="COG1820 N-acetylglucosamine-6-phosphate deacetylase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11530" /translation="MAEGWIIPTQVFDNGTLQSGLAVQVVDGRTTDLRAVAAVPPDAP RQAVPGVLTPGFVDLQVNGGGGVLLNHTPTCAGLMRIATAHRAFGTVAVMPTFITDAP EGLAKAAQAVIALQALGGQGALHIEGPHIAAARRGTHAANHIRPLDDITWQILFKLRA AGVTVMITLAPEMVPVDQIAALVRLGVIVSLGHSDATAEQANAAFAAGARSVTHLYNA MSQMQGRAPGLVGAAINSNAYVGVICDGVHVRDDMVALACRARPVAGRMVLVSDAMPT VGGPDHFDLYGQRIQLRDGRLVNAEGNLAGAHSTMLWGLQRLVGQVGLGLEQALHMAI SAPAALLDKPHLGRITGRFAADLFALDDGLALQPLSENIGHDIA" gene 83610..84218 /locus_tag="SKA53_00440" CDS 83610..84218 /locus_tag="SKA53_00440" /note="COG2834 Outer membrane lipoprotein-sorting protein" /codon_start=1 /transl_table=11 /product="Putative outer membrane lipoprotein carrier protein" /db_xref="CDD:12187" /translation="MKTRIIPFLVAFAMSVHGVGVSAQQLSLPQISDYLNQLQTAQGG FTQVNGDGTLSTGQIYIKRPGRIRFEYNPPQESLVMAGGGQLAIFDPRSNTGPDRYPL SQTPLNVILQRNVDLTAARMVTGSVSDGTITTVTVQDPDNPQYGDIQLVFTANPVELR QWIITDDLGNQTTMVLNDLTTGAPIGDIMFNIAAEMRRRGFE" gene complement(84280..84837) /locus_tag="SKA53_00445" CDS complement(84280..84837) /locus_tag="SKA53_00445" /note="COG4764 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13902" /translation="MVFLGSCGGSGNFSAPRNLDDACSIARERPHYFRAFQAAERKYG VPVPTMMAMVYQESKFIGDIRPPHTYALGVIPIGRQSSALGYSQALDGTWREYQRDVG RSRAQRDDIRDATDFMGWYMTKTVEQTGVPLYDTRNQYLAYHDGRQGYLRGTWRSKGW LIRIASEVDSRAVMYDAQLRSCRRR" gene 85066..85392 /locus_tag="SKA53_00450" CDS 85066..85392 /locus_tag="SKA53_00450" /note="COG3785 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13105" /translation="MLKKQAKYHLGQIVRHRKHPFRGVIFDVDAMFANTDEWYNAIPE DSRPLKDQPYYHLLAENEQSFYVAYVSEQNLVADHSGEPVDHPDLDDMFGPFENGHYP HQLQLN" gene 85464..86234 /locus_tag="SKA53_00455" CDS 85464..86234 /locus_tag="SKA53_00455" /note="COG3022 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:8810" /translation="MLVVISPAKSLDMTPVQIPASAPAFQDDALRLAKTARGLSLGEL KSLMTISDDLARLNRDRFAAFAADPAPEAVKPAALAFNGDTYQGLEAKTLSIDDLHWA QDHLGILSGLYGLLRPLDAIQPYRLEMGSKLKTRRGASLYDYWGDTIAKALNARAADV GADTLVNCASQEYFGAVDRKALKLRVITPSFMEVKDDKPRIVSFFAKRARGAMARFIV ENRLTDAEAIKDFTSGGYAYDADLSDGDTWVFVRDYPA" gene complement(86231..87406) /locus_tag="SKA53_00460" CDS complement(86231..87406) /locus_tag="SKA53_00460" /note="COG0183 Acetyl-CoA acetyltransferase" /codon_start=1 /transl_table=11 /product="beta-ketothiolase" /db_xref="CDD:27979" /translation="MTDIVILGGARTAIGTFGGALAGTTPIDLGTVVAKAALQRSGVA AAQIGHVAFGHVINTEPKDMYLSRVAAMQAGIPDSVPAMNVNRLCGSGVQAIISVVQS LMLGDADFGLAGGAENMSRSPFIIPDQRWGAKMGDIRTQDMMLGALNCPFGTGHMGIT AENVAREHGISRAEQDAFALQSQDRVAAAIAAGYFDSQITPVQVRVKRDMVDFIRDEH PKATTPQALAALRPVFEKDGSVTAGNASGLNDGAAAIVLARADAAQAAGLTPRFRILG YAHAGVRPEVMGIGPVPAVRRLLEKTGLAAADFDVIESNEAFAAQALAVSKELGFDPA RVNPNGGAVALGHPVGATGAIITVKAMYELDRTGGKRALITMCIGGGQGIALAIERV" gene 87536..88195 /locus_tag="SKA53_00465" CDS 87536..88195 /locus_tag="SKA53_00465" /note="COG1136 ABC-type antimicrobial peptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATPase subunit" /db_xref="CDD:10856" /translation="MTLLIVDTLTKTYATADGPFPVLRGVSLTLEAGESLALTGESGS GKSTLLHLIGGLDRADAGRIMLDGQDIARLDDAGRAALRRGTVGVVFQQFNLIPSLKI ADNIAFQARLAGRHDAAWCATLADRMGLTDHLRKYPEQLSGGQQQRVAIARTLAARPK LVLADEPTGNLDETTAATVMDLMLALVAETGAGLLMVTHSLVLAARLQRRLHLRAGQV A" gene 88192..90573 /locus_tag="SKA53_00470" CDS 88192..90573 /locus_tag="SKA53_00470" /note="COG0577 ABC-type antimicrobial peptide transport system, permease component" /codon_start=1 /transl_table=11 /product="permease, putative" /db_xref="CDD:25940" /translation="MTRAAFAALLSHWVRNPVQLFTLLAGLALATGLWSGVQAINAEA RASYDAAASTLDEGRYDRLVARDGAAFGQDVFVMLRRAGWLVSPMLTGDLDGVRLIGI DALTAPAGMGPVNLGGDVDLAGFLTGGDQVFANAATAPRLGAVTVLITPDLADDTAVA DIGTVQRLLGRAGRIDSLLVLPDQPRNLPPLARIAPDLTLQPAQGSTDIAGLTDSFHL NLTAFGLLSFAVGIFIVHGAIGLAFEQRRGMVRTLRALGLPLNRLIGLMLAELLVFAL VAGVIGVALGYVIAALLLPDVAATLRGLYGADVSGNLQLRPSWWASGLGIAFAGTLLA GGSALWGIARMPLLAAAQPRALAMAAGRRASFQLGAALVLLAVAIVLGFNADGLVTGF ALLGTLLIGAALALPPVLNGMLAFASGRARSVTAQWFWADTRQQLPGLSLALMALMLA IVANIGVSTMVSSFRLTFTGFLDQRLASELYISTDSAEQTAALVAFAEGAGAAVLPIQ SADLQIAGQPAEVFGTRDHATYRDNWRFLQSTPDAWDTTFAGQAVVINEQLARRGALG LGDMVTIGSLTLPVEGIYGDYGNPIGQVVLALDAFAQEFPAVEPRRFGLRVAGDPADF VAGLTAATGIGAGQTIDQAEIKALSLAIFERTFTVTTALNILTLAVAGFAILMSLLTL AAMRVPQLAPAWAMGMTRAALGRLELLRAVMLAVLTAALALPLGLALAWVLLAVVNVA AFGWQLPMYLFPLDYARLGGFALLAAVLAAGWPAWRLARTPPGDLLKVFANER" gene 90563..91588 /locus_tag="SKA53_00475" CDS 90563..91588 /locus_tag="SKA53_00475" /note="COG5621 Predicted secreted hydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14705" /translation="MNAKALILCLLPVTSLAQGFAGLGTEVDGFSTPAPDPVFDFPAD HGAHPDYRIEWWYLTANLEDADGTPYGLQWTLFRSALAPYEADGWDSPQLWMGHAAVT TETAHFVAERLARGGIGQAGVVADPFSAWIDDSALEGDWRTLQMRATGSDFSYDMALS ATGPLVFHGDGGYSVKSAAGQASYYYSQPFFDISGTLNLPTGDVQVTGSAWLDREWSS QPLADNQTGWDWFSLSFDDGAKLMGFRLQQTDGMHYTSATWITAEGETTPYADGALQV EPLLTNAAGVPVHWRLTLPARGVDVTVQAVNDDAWMTTSVPYWEGPVTFAGTHQGRGY LEMTGYD" gene 91581..92138 /locus_tag="SKA53_00480" CDS 91581..92138 /locus_tag="SKA53_00480" /note="COG0259 Pyridoxamine-phosphate oxidase" /codon_start=1 /transl_table=11 /product="Pyridoxamine 5'-phosphate oxidase-related, FMN-binding" /db_xref="CDD:25718" /translation="MTDWFTTLDGLRTRAWGMLARGVADARHPCRLPTVCTTSPDGWP EARTMVLRSADQGAAVVTLHTDLQSGKLASLQVNPRVALHVWLRPQALQIRLQAEVTV QSGPDVRPLWDKIPDHAQQSYGVTPPPGAPIGAALEYVKQPDPATFAVLSCRVMQIDL VHLGDQHRRAAYSRSDDWAGQWLSP" gene 92163..94259 /locus_tag="SKA53_00485" CDS 92163..94259 /locus_tag="SKA53_00485" /note="COG1252 NADH dehydrogenase, FAD-containing subunit" /codon_start=1 /transl_table=11 /product="selenide,water dikinase, putative" /db_xref="CDD:10969" /translation="MDKYPFTRDLVLIGGGHTHALVLRKWGMNPLAGVRVSVINPGPT AAYSGMLPGFVAGHYSRDDLDIDLVKLARFAGARMINGAVTGIDRTARTVTVPGRPPI GYDVLSIDVGITSQMPALDGFAAYGTPAKPLGAFAQAWDDYRARAKAPKIAVIGGGVA GAELALAMAHALQGKSPKLHLIDRGRALAALGDKARQKMLVALAGYGVEIIENAEVTQ VFREGVLLRDGRLIHSDFTTGAAGAKPHDWIAGTELDLQDGFISVTAQLQTSDRAVFA VGDCAHMAASPRPKAGVYAVRQAPVLFDNLRAILSGGRLRDYKPQRDYLKLISLGQKS ALAEKFGTVWQGPLLWRLKDRIDAKFMARLDDLPVMPPPQLPKIAAIGLRAALGDKPM CGGCGAKVGRAALQQVLGDAFGDDAGLVQTGQVITTDHLRALVADPVLMTRIAAIHAL GDIWAMGATPQAATVQIILPRMESALQQRTMAEITATTTAVMSEAGARIAGGHSALGD ELTIGFTITGLVDRPITQAGARAGDALILTKPIGSGTIMAGDMAGQARGADVIACLDL MVQSQAKAAAILHAAHAMTDVTGFGLLGHLRGICDASGTGAVLDWAQVPVMAGAAVLS ARGVRSTLFADNQAGAGVVEGAVPDLAYDPQTAGGLLAAVAGHSADDLLGALTRAGYT AAIIGQITDGSAISLR" gene complement(94246..95298) /locus_tag="SKA53_00490" CDS complement(94246..95298) /locus_tag="SKA53_00490" /note="COG2603 Predicted ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27919" /translation="MPIAFATLDDLIKHGFDTVIDVRSPAEFALDHVPGAINLPALSN DERARVGTIYKQISPFEARKLGASLVARNVADHIAQAMADKDGSWRPLVYCWRGGQRS GSFASILGQIGWRTDTVQGGYQTFRRLVQGAVYDRPVPHRVILLDGNTGTAKTALLAR LAAKGVQVIDLEAMANHRGSLLGGAAQGQPSQRAFETQIALALYRLDPARPVLIEAES SKIGSLVIPPSLWAAMTAAQRITLHAPLAARASFLARAYADIAADPDDMARRLAPLRY IRGHQVVDGWMALLHAGDLTGFATALMDQHYDPAYAKSRKIAAHDMLADLHSDTLDDA GQDRLVAAILPLVNAG" gene complement(95355..96296) /locus_tag="SKA53_00495" CDS complement(95355..96296) /locus_tag="SKA53_00495" /note="COG2017 Galactose mutarotase and related enzymes" /codon_start=1 /transl_table=11 /product="putative aldose 1-epimerase protein" /db_xref="CDD:25723" /translation="MQIFGTTTRGETVHAIPLRAGDLTLTLLTYGARIQDLRLAGIDH GLTVGSDDLADYEGAMLYHGAIVGPVANRITTARVRLDGMMYELERNNGQAHLHSGSE GSHAQVWDVIETTAASATLSLDMPDGFAGLPGRRRVTAQFTLSAPATLTLTLTATSDG TTLMNFANHSYWNLDGSGTWQGHSLRIAADHYLPIDDAICPTGDVADVTGTGMDLRHG PVLDAQTPPLDHNFCLSDGEEPLRDVLWLTGQGGVRMVMATTLPGMQVFDGRPDHDAL AIEAQHWPDAPNHTHFPQIKLPAGATYQQITRWSFAR" gene complement(96296..98197) /locus_tag="SKA53_00500" CDS complement(96296..98197) /locus_tag="SKA53_00500" /note="COG1874 Beta-galactosidase" /codon_start=1 /transl_table=11 /product="putative beta-galactosidase protein" /db_xref="CDD:11583" /translation="MHRTLGICYYPEHWPQDQWTEDAAHMVAAGLSWVRIGEFAWARM EAVPGTLTWDWLDRAIDVLGTAGLKVVLGTPTATPPRWMLDKYPDMLAVDAQARARKF GSRRHYDFSHPGYRNECRRIARLMGERYGANPYVAAWQIDNEYDCHDTTLSYSDAARR GFQDWLAHRYQSPAALNRAWGNVFWSMDYDSFAQIDLPNLTVTEPNPAHVLAFRRYSS DQVVAFNKVQADELRRHTSAPLIHNYMGRITTFDHWKVGDDLDIASWDSYPIGFLSDR LEGTAKEKATFLRQGHPDMQAFHHDLYRAVGKGRLWVMEQQPGPVNWAPYNPAPLPGM ARLWAWEAFAHGAETVCYFRWRQAPFAQEQNHAGLLRPDSRPAPALAECRQVADEIAK LPDVGTATAQAALVFDYASAWAWDTQPQGADFDAFRLAFAAYRALRRAGLNIDILPPD CADLSGYKLVLAPGLMKISDPLRAALARFDGIALIGPRSDTKTDELSIPTPLGPDLPD TDLSVVLTESIPPDAKIKLQGGGIFRHWFEHLEGTAPVHLSTKSGQPAIMGGDHLRYL AGWPDDATFDAIIGGLCDALDLPSFQLAEGLRIRDTATHRFVFNYAPRAQAWGGTIVP AAGVHWEAL" gene complement(98238..99059) /locus_tag="SKA53_00505" CDS complement(98238..99059) /locus_tag="SKA53_00505" /note="COG3386 Gluconolactonase" /codon_start=1 /transl_table=11 /product="Smp-30/Cgr1 family protein" /db_xref="CDD:8713" /translation="MIFDDTQCALGEGPLWHPLRGELFWFDILGKRLQSKARQWQFDE YVSAAGWVNADILLIASQTALIRFDLRDGSQTPLCPLEADSPHTRSNDGRADPQGGFW IGTMGINAEPGAGAIYRYFKGELRQLFAPVTISNAICFAPDGKTAYFTDTPTQKIMRV ALDADGWPQGDPVLHIDLRATDLRPDGAVVDAQGNLWNAQWGAGRVAGYAPDGTFIDS YSFAATQTSCPAFGGDDLSTLFCTSAATGLDGPDQGRTYATPTPYKGQAEHQVLL" gene complement(99056..99661) /locus_tag="SKA53_00510" CDS complement(99056..99661) /locus_tag="SKA53_00510" /EC_number="4.1.2.14" /note="COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase" /codon_start=1 /transl_table=11 /product="keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase" /db_xref="CDD:10668" /translation="MHRPLIAILRGITPPEAEAVTAALIAAGITKIEVPLNSPEPFDS IGRMARAFGDDALIGAGTVLSTADVGRVAQAGGRLIVSPNCDPRVIVATKTAGLQSWP GVMTPTECFAALKAGADGLKIFPASLIGPDGIKAIRAVLPKDTQVYAVGGASTSNFAT WIAASADGFGIGTALYQPGLTPAEVSTRAHDIVAAYDKAAG" gene complement(99664..100566) /locus_tag="SKA53_00515" CDS complement(99664..100566) /locus_tag="SKA53_00515" /note="COG3734 2-keto-3-deoxy-galactonokinase" /codon_start=1 /transl_table=11 /product="putative 2-dehydro-3-deoxygalactonokinase" /db_xref="CDD:16330" /translation="MTATITPAWIGVDWGTSHVRAWAISASGTLLAQASSDRGMGRLD RAGFEPALLALVGPWLHGPTPVIACGMVGSRQGWVEAPYAATPCAPLGGPLAPACSDD PRLAVHVIPGIKQLHPADVMRGEETQIAGYLAQNKGWDGVICLPGTHTKWVHVSAGEI VSFQTFMTGELFATLTTQTVLRHSIATDGWDDAAFDTGLADAYGRPEKLAGRLFSLRA EGLLHDLPGATARARLSGLLIGAELAAAKPYWLGQQIAVIGAGALARLYVTALAQHGA PATQVNAEAATLAGLTAAYRQLKG" gene complement(100563..101321) /locus_tag="SKA53_00520" CDS complement(100563..101321) /locus_tag="SKA53_00520" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="Short-chain dehydrogenase/reductase SDR" /db_xref="CDD:25396" /translation="MTATFHDLTGASVFITGGGNGIGAALTDGFLTQGAKVAFVGRSD ASAFVDQMAAKHANRPLFIPCDITDTDALQDAIAKAADAHGPLKALVNNAANDARHEA ATITPAYWDEMQAVNLKAYFFACQKAATVMAPQGAMINFSSISYLFGAAGMIGYTTAN AGITGMTRSLAREWGPRGIRVNAIAPGWVFTEKQETMWATPKTKAAFLERQCLPEPIM PADMVGPVLFLASDASRMMTGQVMVVDAGVVTTG" gene complement(101318..103402) /locus_tag="SKA53_00525" CDS complement(101318..103402) /locus_tag="SKA53_00525" /note="COG3345 Alpha-galactosidase" /codon_start=1 /transl_table=11 /product="alpha-galactosidase" /db_xref="CDD:12679" /translation="MTHTYRIDTGRQTLVLAARNTRLPQVVYWGAPLPADEDLAMLHA AHAIDITGGMLDENPDLSLCPEASRSFPGQPGLILRDAGGAPVLAMFSLVDAVQTATD LRLTYRDADNGLDLICTFLSDPETHIITCQTALNAEYPVYLDWLAAPVLPAPQHSETM IDISGRWCGEFQLAHTPWSAGIRLRESRTGRSGHEHFPGLIVPCHGATNTQGEAYAFH YGWSGGHRMIAEELADGRRQIQWGHAAGSDTQAATHFSTAPLYINYSDSGLNGCAVAF QRHLRDRIVTWPKPDTPRPVHYNCWEAVYFDHKLPVLKDIATRAAALGAERFVLDDGW FGRRDDDTTSLSDWIVDARKYPQGLQPLIAHIHGLGMTFGLWFEPEMINEDSDTYRTH PGWVLGRADQTRGRQQLVLNMALPAVREYLYGRIAAILTDHPIDYIKWDHNRVLPMPD AAQTRGTYALLDRLRVDFPAVEIESCASGGGRIDFGILQRTQRVWLSDSNDALERLRI QHDAALFLPMAVTGSHVGPRICHTSGRTLDMSLRAWVAAQRHMGFEMDPRELTDHEAA VLSKVTGWWKQNRHWLHSADILRLDSADPAVIAEQQLARDKARFVVFAGKAATSTQIV PRPLRLTGLDGQARYRVTLVNRDEAPGLSRGAPLLKSGSLVASGTYLMQHGVTLPWSF PDRIWVLQGESL" gene complement(103410..104258) /locus_tag="SKA53_00530" CDS complement(103410..104258) /locus_tag="SKA53_00530" /note="COG0395 ABC-type sugar transport system, permease component" /codon_start=1 /transl_table=11 /product="putative ABC transporter system permease" /db_xref="CDD:10269" /translation="MFPTPVQKSSPTVRLSYQAFLPVALILWLLPLIAVMIFSIKPDV DFTSGNYWGWPSSFEGFTNYGLVFFESAMPRYLLNSVMITVPTVIGTVALACMTGFAL GVYKFKGNLLIFFMFIAGNFVPFQILMVPVRDLTVDMGLYNTKTGLVLFHIAFQTGFA TLFMRNFIRALPFALIEAARVEGVAEWRIFWYVVLPLMKPAIAAMAVLIFTFIWNDYF WAVVLTQGPESQPVTAGITSFNAQYRAAYHLMSAGSIVAALPPVLMFFLMQKHFIAGL TLGAVK" gene complement(104358..>105331) /locus_tag="SKA53_00535" CDS complement(104358..>105331) /locus_tag="SKA53_00535" /note="COG1175 ABC-type sugar transport systems, permease components" /codon_start=3 /transl_table=11 /product="ABC transporter, permease protein" /db_xref="CDD:10893" /translation="QTGRRMSISADSDRQPPRGWYKRNEIAITPWLFLAPGVLFFVVY VIAPIWQSFGMSLYDWNGLGDIDTNGTYVGLENYNKLFGLNGERADRNFQISLWNNLR WLVLYLLAIPLGLFIALFLNQNVRGIRLYKSLFFFPFVISQVVVGLVFSWFYLPNNGL FTIVTGWFGFEISGGVLGNPNTATYGIIVAGLWPQTAYCMILYLTGLNAVDPEQVEAA RLDGAKGRKMLWHVILPQLKPATFIAFVVTIIGALRSFDLVSIMTGGGPFGSTRVLSF YVFEKSLSERGLQYGYAAAVAVVLFLIMLVFISYFLWTMYQDEKEAR" gene <105432..105511 /locus_tag="SKA53_00544" CDS <105432..105511 /locus_tag="SKA53_00544" /codon_start=3 /transl_table=11 /product="hypothetical protein" /translation="YLLAIPLGLFIALFLNQNVRGMKAV" gene 105561..105704 /locus_tag="SKA53_00549" CDS 105561..105704 /locus_tag="SKA53_00549" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFSWFYLPNNGLFTIVTGWFGFEISGGVLGTNTGGMRITAHPLG EDQ" gene complement(105698..106957) /locus_tag="SKA53_00554" CDS complement(105698..106957) /locus_tag="SKA53_00554" /note="COG1653 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter, substrate-binding protein" /db_xref="CDD:11364" /translation="MRSILKTSFAAFVAAGIAASAMPANAQSLSGDLVIFSDMSNPAP RAVMEGMVARFGEMHPDLNIELTVIDREAYKTQIRNFLTANAPDVANWYAANRMLPYV EAGLFEDVSDIWDGSMSEELGSTKGALTVGDAQYGVPYTYYQWGVYYRKDIFDQFGLT EPTTWQEELANCQTLIDNGIKCYTIGTKFLWTAGGWFDYLNMRTNGYDFHARLTNGEE SWTSDEVRATFENWRTLIDMGAFIDDHQNYSWQEALPFMVNGEAASYLMGNFAVAPLR EAGLTDNQLDFYQFVEITPGIPKGEDAPTDTFHIPSAAQNKEAAREFLRFVVSAENQT LINNGANLGQLPVNALSSVDEDKFLQQGFQMLSSGAPGGIAQFFDRDAPAEMAAAGME GFQEFMVFPDNLDDILERLEATRQDVY" gene 107115..107909 /locus_tag="SKA53_00559" CDS 107115..107909 /locus_tag="SKA53_00559" /note="COG1414 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11129" /translation="MTSDGTVGKALEVLDQVAAYGRPVRFSELLAASPFPKPTLYRFL QTLTNQRMLAYDPDRQTYSPGVRLVRLAHAAWEQSTLAPIARPHIDALSAAVGETVHL AQLDHAQVLYIDKRNANKPVQMFSQAGKVGPAYCTGVGKVMLAFCDPAVIAAVIEQQS FHRFTAATLTTPAALRTELSAIRANGYGFDREEHEPGIICIAMPILSDGGRVLGALSV TSTTSRTNLAGLESYVPILQDTASKIARDAQSWSFPDHDAKEPTGR" gene 107913..108974 /locus_tag="SKA53_00564" CDS 107913..108974 /locus_tag="SKA53_00564" /note="COG3839 ABC-type sugar transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13156" /translation="MSGVTLKNVVKRYGDVQVIHGIDLAIGDGEFCVFVGPSGCGKST LLRMVAGLEETTEGSMSIGERDVTRLDPSQRGVAMVFQTYALYPHMTVRENMGFGLKM NGHPKKVIAEKVAEATRILKLEPYLDRKPAALSGGQRQRVSIGRAIVRGPEVFLFDEP LSNLDAELRVEMRVEIARLHREIGATMIYVTHDQVEAMTLADKIVVLRAGRIEQVGAP MELYRDPDNKFVAGFIGSPAMNFLGGTAKDGTVTVPGMKADFAGVIPASYSGAVTLGM RAEHLAVDPAGDTHTVDLTESLGGVSFVYLTSDTGERIVIEERGDDRSVEGARVGVTI DKSRLYLFDAQTEVRIRNG" gene 109005..110216 /locus_tag="SKA53_00569" CDS 109005..110216 /locus_tag="SKA53_00569" /EC_number="4.3.1.19" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="threonine dehydratase" /db_xref="CDD:10889" /translation="MTLTAALIAQTYAAIAPATIRTPLIRATRLSHLLGIDLYLKLEN LQHTNAFKARGALAKLLTLDAAARKAGVIACSAGNHAQGVAYHATRLGIPSTIVMPEG TPFNKVQRTADLGAEVVIHGAGFDDSVQFTLDLAAQKGMTFIHPFDDPVVAAGQGTVA LEMLEQMPDLDCIVVPVGGGGLIAGMAVAAKSVKSAITIIGAQAHLFDAAKAQIEGVA PHFAGATLAEGIAVRQPAPANIAVIRTHVASIDSASESEIESAVFDLLSHEKLVAEGA AGAGLAVIKANLARFAGQKVGLVICGGNIDSRLLSTLILRGLMRDGRITRLVFEIDDR PGQLAMISRIIGDAGANVIEVIHQRMMQSVSLKKAELEIVIEARDQRHVDDITGLLRD AGLSVRTAQDL" gene complement(110285..111157) /locus_tag="SKA53_00574" CDS complement(110285..111157) /locus_tag="SKA53_00574" /note="COG3302 DMSO reductase anchor subunit" /codon_start=1 /transl_table=11 /product="dimethyl sulfoxide reductase, C subunit, putative" /db_xref="CDD:16271" /translation="MHPASSVIIFTTFSGLGFGLLFWLGIGAITPTGLMALIWFAIAY LAAVGGLLASTFHLGRPERAIKAFSQWQTSWLSREGICAVATLLIMAAYGAGLVFFDT VLAPLGWLGAAGALATVFTTAMIYAQLKTVPRWRHWSTPALFLALSVGGGALLGGQVT EALVLLGLAAALQVYTWVTGDTRLARSGTDMASATGLGHIGTVRAFEPPHTGTNYLMR EFIHVVGRKHAQRLRIIAVALAFVLPIIFLLVPFSHIWGALALVSHIAGVLVLRWLFF AQAEHVVGLYYGKR" gene complement(111157..111918) /locus_tag="SKA53_00579" CDS complement(111157..111918) /locus_tag="SKA53_00579" /note="COG0437 Fe-S-cluster-containing hydrogenase components 1" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster-binding protein" /db_xref="CDD:10311" /translation="MTQLPASTAKKLGLVIDLDTCVGCHACVISCKGWNTENYGAPLS DQNAYGADPSGTFLNRVHSYEVQPEVGTAQLIHFPKSCLHCEDAPCVTVCPTGASYKR VEDGIVLVNEADCIGCSLCAWACPYGARELDAKAGVMKKCTLCVDRIYNENLPEEDRV PACVRTCPSGARHFGDLGDVDSDVSQLVAARGGFDLMPEQGTKPVNKYLPPRPKDVMP EYDVLAPFLEPVATDGKGFAHWLDKALSALPGGAK" gene complement(112017..112142) /locus_tag="SKA53_00584" CDS complement(112017..112142) /locus_tag="SKA53_00584" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDVAQMTKGQIILLIIAFVTITLGSFIWFIATWDPAMRVPV" gene complement(112124..114949) /locus_tag="SKA53_00589" CDS complement(112124..114949) /locus_tag="SKA53_00589" /note="COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing" /codon_start=1 /transl_table=11 /product="oxidoreductase, molybdopterin-binding" /db_xref="CDD:28633" /translation="MSLDQPQLDTSPHVSDELRKTTCYMCACRCGINVHMKDGKVAYI EGNRDHPVNKGVLCAKGSAGIMQHNAPSRLRAPLRRVGERGSGEFEEISWEEALQTAT DWLAPIRANHPEKLAFFTGRDQSQSFTSFWAQGFGTPNYAAHGGFCSVNMAAAGIYTM GGAFWEFGQPDWDHTKLFMLFGVAEDHDSNPIKMGIGKIKARGARIIGVNPIRTGYNA VADDWVGITPGTDGLFILALVHCLMSAGKVDLDYLAQFTNASVLVNEDPKSDQFGLFL RDAAGQPQVIDRRTGQLAPWNGQGVEPDLAATHRAAGITHRPVFHQMADRYLDPAYAP EAVADRCGISAQRIRALAADLARVAFDEPVILDRAWTDFRGKKHAQMVGRPVSFHAMR GISAHSNGFQTCRALHMLQIILGAVETPGGMRFKPPYPKPATAHPKPHGKVTAGAALD GPHLGYVQGPEDLLLHDDGTPIRIDKAFSWDNPMSAHGLMHMVISNAHAGDPYKIDTL FMYMANMSWNSSMNVGGVHKMLTDKDENGDYVIPRIIYSDAYSSEMVAYADLILPDTT YLERHDCISLLDRPICEADGVADAIRWPVVEPDRDVRGFQSVLCDLGARLGLPGFVND DGSAKYKDYADYITTHIRRPGIGPLAGFRGADGQDEGRGTANPDQLQSYIDNGGFWIS HVPENCAYYKPFSTEYQDWAVKMGFYDVVQPYIFQLYVEPLRKFQAAAEGRGHRQPPD HLRGQIKATMDPLPIWYPPFEDGHVDPAEYPIHALTQRPMAMYHSWGSQNAWLRQIHG HNPLYLPTKIWDQHGFQDGDWARVSSAHGAITVPVAHQAGLNENTIWTWNAIGKRKGA WALDETAPEATKGFLLNHLIHELLPPRGDGLRWANSDPVTGQAAWFDLRVKIEKSGLP NEAQPVMPALKSPVPPAPKNLAWMSRK" gene complement(114970..115158) /locus_tag="SKA53_00594" CDS complement(114970..115158) /locus_tag="SKA53_00594" /note="COG0282 Acetate kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10156" /translation="MKGAVQTGSAMATTGGIDENAGEIRSRIMDHLAFLDKVPLHVIP ADEEKQIARDALTLLAQY" gene complement(115155..115904) /locus_tag="SKA53_00599" CDS complement(115155..115904) /locus_tag="SKA53_00599" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIMPFDLGPGTAILLGFALLGAAFVRGYSGFGFSAIFIAFAALL TNPLPFIPVVFACEIMMTAFQARGIRAHVDWHRVGWLIVGAAIALPFSVSVMLSVGED TARIAISGVIVLMALLLLSGWTLQRRIGALGHGSVGVLSGMCNSAGIGGLPVAAFLSA QPVQAAGFRATMIVYLTALDLITLPLLWLGGLVTWDTVIAALMAFPILGLGVWLGGRR FLAASPAAFRQSAVLLLLMLSALGLIRAMVT" gene complement(115901..117367) /locus_tag="SKA53_00604" CDS complement(115901..117367) /locus_tag="SKA53_00604" /note="COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /db_xref="CDD:10886" /translation="MSISIETFFLDPSAVGTLQARIQQMVAQGILAGRFRPGERLPSS RMMAQHLGVSRITVTLAYTELVADDYLTARGRSGYYVSDNAPEPPAFAMQQTQTGTVD WTRAIGQRFTPALSIEKPTDWANYRYPFIYGQADRTLFDTANWRLCALRALGMRDFGA LTADYYDGDDPELVDFISRQTLPRRGILANPDEILITMGAQNALWLSAQVLLNSRRRA AIEDPCYPAMRNILMQSRCQLSIVPVDQDGLPPDALSDDIDVLFSTPSHQCPTAATMP LDRRKALIAKGEAQDFIIVEDDYEFEMSFLKPPSPSLKSLDPHGRVIYVGSFSKSLFP GLRLGYLVGPAPFIKEARALRATVLRHPPGHIQRTVSYYLSLGHYDALIRRMSRAYHD RRQVLDAALQDSGLVVAGQGQSGGSSVWVRTPDGTDTTPLAQSLRAKGVLVEPGARFF AGDAPPTEYMRLAYSSIPASRITEGVRLIAAALTKNAA" gene complement(117428..119014) /locus_tag="SKA53_00609" CDS complement(117428..119014) /locus_tag="SKA53_00609" /note="COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /codon_start=1 /transl_table=11 /product="taurine--pyruvate aminotransferase" /db_xref="CDD:10036" /translation="MISATCNGKPDFRIRTSPVYMRKSGIMFACHLALLIMVQDGSQW DAMHKPADRIRRPPKSFFKTEPPDMDTLNFANDPGHVIEADRAHVWHHISQHKAYETI DPRIIVEGRGLRVWDIKGKEHVDAVSGGVWTVNIGYGRERMGRAISDAVTKMCFFGGA LGTIPGAQFAEMLIEKMPGLDRVYYANSGSEANEKAFKMVRQISHKHYGGKKSKILYR ERDYHGTTIANLSAGGQDERNAQYGPFVPGFIRVPHCLEYRSQDGTLGEEYAANAAKA IEDVILAEGADTIGALCLEPITAGGGIIVPPSGYWQRVQELCRKYDILLHIDEVVCGL GRTGAWFGYQQFGVQPDIVTMAKGVASGYAAISCCVTTNAVFEMFKDDTDKLSYFRDI STFGGCTAGPAAAIENMRIIEEEDLLGNSVAMGAHLSGNLHALMDKHKWIGDVRGMGL FQGAELVADRTTKEPMDEKKVQAIVADCMAQGVIIGATNRSLPGFNNTLLFAPSLIAT KDDLNQITEAVDQAITRVLG" gene 119023..119541 /locus_tag="SKA53_00614" CDS 119023..119541 /locus_tag="SKA53_00614" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMTVSALLILLPALIGFVVLLARHRKPTRPAAVIARHAIVVDGS NVMHWGGAPSAKVLARVLGALQTKGYTPIVFFDASVGYRLADRYLDAGDLAGLIGLPA AQIHVVDKGVIADSAILEFSALHGLRIVSNDQYRDWRVQFPHLHRKGAVLRGRFQDGA VVWQQRLKLVRA" gene complement(119521..119982) /locus_tag="SKA53_00619" CDS complement(119521..119982) /locus_tag="SKA53_00619" /note="COG0748 Putative heme iron utilization protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10616" /translation="MKREPVNPTDDAARVLVRQLLGDMRHAALAVIHPDTGAPYVARV GLIWHGTTALTLVSTLSTHTQALLAHPACAVLVGEPGAKGDPLTHPRLTLSAQAAQVD KPAHKDIWLAAVPKAKLYYDFTDFVMFRLAPTGIDLNGGFGKAYRLRADEL" gene complement(119979..120404) /locus_tag="SKA53_00624" CDS complement(119979..120404) /locus_tag="SKA53_00624" /note="COG0326 Molecular chaperone, HSP90 family" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit B" /translation="MKHLTCALFVLVTPAAAWEFSPAPICTLTDADGLITVTYDAALP EYSVTLTLPDGTWPDDPTFAMNFAGNRPIFIQTDRHRVSPDRRSLTVTDSGFGNVLDG LQFNLRAYATSGDSTLGLSLDGIGPAMAAFRACPAANLA" gene complement(120450..122696) /locus_tag="SKA53_00629" CDS complement(120450..122696) /locus_tag="SKA53_00629" /note="COG0556 Helicase subunit of the DNA excision repair complex" /codon_start=1 /transl_table=11 /product="UvrABC system protein B" /db_xref="CDD:10427" /translation="MTKDNNYRSIKGIPAMAYAQTDKSPPVYLANPAPDVKSREKMEG GRRFVLKTEFEPAGDQPTAIAELSAGILAGERDQVLLGATGTGKTFTMAKMIEQTQRP AIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEAYVARSDTYIEKESQINE QIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYGAMTQDIHAGQSYDQRQIIAD LIAQQYRRNDQAFQRGTFRVRGDSLEVWPAHLDDRAWKLSFFGEELESITEFDPLTGT KTGTFDKVRIYANSHYVTPKPTMQQAVIGIKKELRMRLDQLVAEGKLLEAQRLEQRTN FDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGG MYKGDFRRKMTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWEMEQTGGV FTEQIIRPTGLIDPMIEIRPVETQVDDLLDEVRKVAAAGYRTLVTTLTKRMSEDLTEY MHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDA DKEGFLRSETSLVQTIGRAARNAEGRVIMYADRITGSMERAMGETERRRTKQLAYNEK HGITPTTVKKNVEDILAGLYKGDVDMNRVTAKIDKGRAGGNIKTVIDGIRTDMRKAAE NLEFEEAARLRDELKRLEAVELAIADDPLARQQAVDKAVDDAAKASGRSTGGRGGMRG GKSRYAKK" gene 122745..123977 /locus_tag="SKA53_00634" CDS 122745..123977 /locus_tag="SKA53_00634" /note="COG2309 Leucyl aminopeptidase (aminopeptidase T)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:2596" /translation="MTMIDPVKLDRLAEVAVRTGVNLQKGQDLVITAPLSAIELVRAI TVHAYKAGAGIVMPFFTDEAITLARYEHAEDASFDRAPGWFYEGLAAAYKGGAARMAI TGDDPMLLADQDPAKVARLSKATSIAAKPAMAPIVGFEVNWNIVAFPGAGWAARVFPD LPVEQAQGKLMDAIYTASRLDGDDPVANWAAHTTELQKRVKWLNDHDFAALKYTGPGT DLMLGLADGHIWKGGASPALNGVVCQPNIPTEEVFTCPHAYKVDGVVSATKPLAHQGN VIENIKVRFEAGRIVEATATKGEAVLQALLNTDDGACRIGEVALVPHSSPISQSGTLF YNTLFDENASCHIALGQCYADTIEGGSEYSAEELQQKGGNQSLIHVDWMMGSDAVDID GITKTGEVIPVMRKGEWA" gene 124034..124360 /locus_tag="SKA53_00639" CDS 124034..124360 /locus_tag="SKA53_00639" /codon_start=1 /transl_table=11 /product="NADH-ubiquinone oxidoreductase family protein" /db_xref="CDD:16096" /translation="MKGPKMRARIYKPARTAMSSGIAKTRSWVLEHVAEAARSIDPLM GWTSSSDTQAQVRLYFDSKEAALDYAHENGIEAVVQDPKLRKPNIRAGGYGENFATNR RGAWTH" gene 124414..124487 /locus_tag="SKA53_t01096" tRNA 124414..124487 /locus_tag="SKA53_t01096" /product="tRNA-Arg" gene complement(125113..125328) /locus_tag="SKA53_00644" CDS complement(125113..125328) /locus_tag="SKA53_00644" /note="COG1055 Na+/H+ antiporter NhaD and related arsenite permeases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDFRQEQAKLTSWREILMTGSFASIINVSGTSYFYGFEIQSASA YFIGDLGGLLACMVILMLGFRWLRRTQ" gene complement(125680..125928) /locus_tag="SKA53_00649" CDS complement(125680..125928) /locus_tag="SKA53_00649" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLWQMEVEVGLETLPQPQKDVYYAACLVADDKQLVHSDVVKHQP ILALMSRPTFYRALKSLVEKNLLVHAGPHQDGRYFVKR" gene complement(127553..127777) /locus_tag="SKA53_00654" CDS complement(127553..127777) /locus_tag="SKA53_00654" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVMELSLKLYSFLAIRVLEPSVTQRSSTLMETVFLISLHLQHHM GGMLTRLAATGMELKAMLSITIKVEQGFSA" gene 129350..129607 /locus_tag="SKA53_00659" CDS 129350..129607 /locus_tag="SKA53_00659" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKQTGRCTRHGGKSTGPRTEEGRARIAAAQTTHGRLTKEARAEA TRWAQVGREIRAELRDIEREAIAGGLLAKDWREMFEPKPDK" gene complement(129819..131729) /locus_tag="SKA53_00664" CDS complement(129819..131729) /locus_tag="SKA53_00664" /note="COG5519 Superfamily II helicase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="DNA primase domain protein" /translation="MDDRTSLVAQLLADSEAARQTAEVAEAAVEAQRQYADFGGALHM FKVVKDKQPIPVRLCNFTAEIEREVVKADGLTTARHFTVSGRMETGNPLPTIDVPASE FDRLEWLATEWGASPQIFVGSRYRDHVAAAIKERSDPELVQLCQHTGWAKFDDELLYL TASGGIGTEGLNEEARCELQGSLADFSLPAPADPRTLGLADLLGAFRDVQKDGVGLVL LGGVMRATLCHFMPATLSIYLQGTTGTFKSAFAGVLQGFWGIKFDGANLPANWSSTGN ALEKTAFLAKDALLIVDDFVARGTRHEVAKTHANAERLLRAQGNQAGRSRMTSKAELR NAFHPRGIILATGEDIPNGHSLQARLVIVNVARGAIDTTVLSGLQKLARDGVLAKVMA SFVQWLAMESKRNALHEFIGMALEIDRENIGASGHARTQDNLANLLMGLRVFLDFADD AGEISSQVTQGFMDIAKDAACALADLQSAIDHEASDAQRFVDLMRAAVSSGKAHIERS SGGKPDNARALGWRDVDLGQSGTRTEAMGTRIGWVDGEELYLDPTASLSVIKALASGL DNHLGSSERAIAKSLREAGLLSRCDKSRNTTKVSVLGARRSVYVFRMADIFDLDSASA SPIGHGDADIPF" gene complement(131722..132603) /locus_tag="SKA53_00669" CDS complement(131722..132603) /locus_tag="SKA53_00669" /note="COG0554 Glycerol kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDFKNNSPQPHMSSTLAPQEEVALAAANWVKMGFPVEVRRNGLP TVDPRSPEQRKDPVATYFILCEISGLGLAVKTGPKTGLLAITASTSDENSGLNALRNA GFYCPQCDSPIRYDAIMDGKFEGGFHTMLYYVGKETFLRTALSELDGVVVEGSGEVIT IPPGICDYGLALGVSTKATYEGPETLAPVGIPYLPDGLRKMIRAAERQTLADKRKPNS RRGVLPELYAPVAEGGRNNALARRAGFLLGVRKLTEEQTLKALLDINQRCCQPPLDIC DVQSVVRSIAKRHQRHG" gene complement(132603..132797) /locus_tag="SKA53_00674" CDS complement(132603..132797) /locus_tag="SKA53_00674" /note="COG3311 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24803" /translation="MSTITRFIGRRELLNELGVSKTTILRWTAERGFPQPLPRSGQVP IYDLAKIEAWLLGVAEEEVR" gene complement(132986..134146) /locus_tag="SKA53_00679" CDS complement(132986..134146) /locus_tag="SKA53_00679" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="possible phage-related integrase" /db_xref="CDD:27722" /translation="MPKLSTVRLTDTFIRSLRPKDQRYDVFDASQPGFGVRVATSGAL SWVLLTRENGRRKRITLGGYPAISLSKAREAARLALSEIQEGTFGRKNAPATFETAVE EWYAREQRAKKSFRQVEQAMRLHVLPFLGRHQLDQIKKADLMRVIDRVAERGKLTQAN RVRAFITRFFNFAIERDLLMSSPAAALPRPAVEISRDRVLSRDELCAVWETAEQMGFP FGRITQLLILTAQRRDEVAGMRWSELDLDRARWIISKERAKNGKAHIVHLSPQALALL STIPRQNGVDLIFTTTGRSAVSGFSKAKAALDARSHVSDWRFHDLRRSAATFMAEELR ITPVVVDRILNHVSGTVRGVTAVYLRGEHLADREAALAAWGQLVENLVNSNK" gene 134745..134867 /locus_tag="SKA53_00684" CDS 134745..134867 /locus_tag="SKA53_00684" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTHIYGDLAENARFVAAFKTALRRIWADGMSAAIQNYLSR" gene complement(134928..135635) /locus_tag="SKA53_00689" CDS complement(134928..135635) /locus_tag="SKA53_00689" /note="COG1814 Uncharacterized membrane protein" /codon_start=1 /transl_table=11 /product="similar to nodulin 21" /db_xref="CDD:28436" /translation="MNMPYEPAHEEVHYINRAGWLRAAVLGANDGIVSISSLIVGVAA ATPEPTAIFVAGAAGLAAGAMSMAAGEYVSVSSQSDVERADIAREQQALIDTPAAEEA ELASIYESRGLTKKTAALVARELSEKDALGAHVRDELGLSEVHTANPLQAAIASGFTF TVAAALPLAAAILAPSDKILPTVVIATLICLAGLGALGAHIGGAPKPRATARVLFWGA AAMAITACVGALFEVSI" gene 135917..138202 /locus_tag="SKA53_00694" CDS 135917..138202 /locus_tag="SKA53_00694" /note="COG2838 Monomeric isocitrate dehydrogenase" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase, NADP-dependent" /db_xref="CDD:15587" /translation="MDGKGLNSPDSHLKDRNSPMTNNATPDIIYTKVDEAPQLASVSL LPVIQSFAKAAGVSVGVKDISLAGRIIAAFPENLRPDQRQPDDLAELGQLVKSPNANV IKLPNISASVPQLVAAVKELQAKGYAIPDYPQDPANDAEKAIRARFDAIKGSAVNPIL REGNSDRRAAVAVKNYAMSNPHSMGAWAPDSKTIVSTMAGNDFFSNEKSVTLTAEQAG DARIELVGADGSITVLKDKVSYTAGTVVDATFMSAKALDAFLAEQITLTKDAGILFSI HLKATMMKVSDPIIFGHAVKVFLQPMFDTYGATLAAAGISPNSGLGALLDQVAALPQG AEILAAIDAVMAERPALYMVNSDKGITNLHVPSDVIIDASIPALIRAGGKGWGPDGKA ADTNCIIPDSSYAPIYDESVAYFKETGALDPRTAGTVQNVGLMAQKAEEYGSHPTTFE IPHAGTARIVFANGDIVLEHAVEAGDIWRSASTKQAPIEDWVKLAISRQKAEGCQAIF WLDAARAHDAELIKYVEPILAAAGVADKFQIMTPRAATRVSLETIRKGKNSIAISGNV LRDYLTDLFPILELGTSAKMLSIVKLMNGGGMFETGAGGSAPKHVQQLAEENHLRWDS LGEFCALGESLKFLAETKDNDKARILGNAVDRATQGVLDNNKSPQAKVGQTDNRASHY FFALYWAQALATQNEDSSLLATFAPIARALEENEAAILAELSTAEGKPADLGGYYLTD ADKTESVMRASPTLVKILSVL" gene complement(138269..139120) /locus_tag="SKA53_00699" CDS complement(138269..139120) /locus_tag="SKA53_00699" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, inner membrane subunit" /db_xref="CDD:10470" /translation="MSDANLNTDENVTPDTVWVEHTSFVDQIPRSILMLFVFAVFVGL WQIATSFNLVSSIVLPTPVETFNDMIFVGKNLLTGDYMLSALWITTKEVIYGFALAMA IGFSLGILVGETAFGERAIMPYLVALDTMPKVAFAPLFIAWLGFGIESKVALAAFIAT FPIVVGTAAGLHATDENSRMLFKTMGASRLQTLFKMKLPMGLPQIFTGLKIGAVGVMA GAITAEFLGGGKGFGELIRVAASQLNTPRVFSLILYLSILGLGLYALVTFAQRRIVFW HRDTVSK" gene complement(139117..139929) /locus_tag="SKA53_00704" CDS complement(139117..139929) /locus_tag="SKA53_00704" /note="COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATPase subunit" /db_xref="CDD:10838" /translation="MTTISAATSDVQPALGAPVYELTHVSKTYARNRVIALDDVSLTL RKGSFSSVIGSSGCGKSTLLKIMAGLIPPTKGRVVLQGKPVTGTRRDIGMMFQQATLF PWRTTIENIVLPIEIRDGRAAAEKAKEKARALLDIVGLNGFEDVFPNELSGGMAQRAS ICRMLITEPAVLLLDEPFSALDELSRDMMNMELQRICTEQNATAFLVTHSIQEAVILS DDIYVMKPRPGRLAEVVTVDLPRPRTLDMMTTPKFGETVNYIRGLLDKGEAM" gene complement(139929..140879) /locus_tag="SKA53_00709" CDS complement(139929..140879) /locus_tag="SKA53_00709" /note="COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic binding protein" /db_xref="CDD:10584" /translation="MAQDLRDVTFVQPSPSAINSFPVFVAIGEGYFAEEGLNVTVESI NGSSAVLQALAAGQAEFGRPGPGPVLAARARGEDAVFIYNVAARSNFGVVVRADSDIQ GPEGLRGKVIGTGTADGAEVGFARNVMAGSGLTEGTDYEFLTVGDGGPATVGFTTGAM DAYSASTADAAILNQRGMAVRDITPGEFARFFGNGIATMGNVIETDPELVAGFVRAFA RGHAFALDDANRDTVLAHLKDANPQEGEDVQFQSALFDAVRSKTIPVDMTNGLGYQPP EVWEEWQDSLVSGGDLAAPLPDLTAAYTNEFTAMAHEAMK" gene complement(141012..141926) /locus_tag="SKA53_00714" CDS complement(141012..141926) /locus_tag="SKA53_00714" /note="COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /codon_start=1 /transl_table=11 /product="putative enzyme" /db_xref="CDD:10054" /translation="MRLATLLIGGKPAAAAQLASGAWLNIAQAAAADPQTKVEADSLQ SLIQGGDAAMAGVAALVAQADSGQHAHAVVSDAVLMAPIPDPRKNIFCVGRNYAEHIA EGEKAQNIKVGVTEHPVFFTKPPTSVVAPGGDVLIFPTISQDIDYEVELAVIIGKPGR NIAKADAFDHVFGYTILNDITARDVQRRHGGQYFKGKGFDGSCPIGPWIVTKDAIKNP HDLSIRLSVNGQQRQNGKTADMIFDIPTLIASLSEGLTLEPGDIIATGTPSGVGYAMD PPQFLKAGDQVVCDVSQIGQLANTVRNA" gene 142096..142788 /locus_tag="SKA53_00719" CDS 142096..142788 /locus_tag="SKA53_00719" /note="COG2186 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11894" /translation="MSKTEILVQRVKQMIDSHGYAHSDRLPCEREMCQTLGVTRNQLR RALAELEGQGLIWRHVGRGTFLGARPVLNLEDVTYLRDRVKPAQVVSVRFTIEPELAR LAAIYGKKADHEEIQHCADRCRNAPDWRGYEAWDNKLHHAIARASQNQLHLYYFETLN VVRRSVVWGQPRKTIKPADGYSSFHEHDVIVQAILTHDADLAAHSMMDHLRSVYSRIL PSMNLDIPKEYA" gene complement(142853..143536) /locus_tag="SKA53_00724" CDS complement(142853..143536) /locus_tag="SKA53_00724" /note="COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /codon_start=1 /transl_table=11 /product="fumarylacetoacetate hydrolase family protein" /db_xref="CDD:10054" /translation="MSDFVIPLPAVTTIPVASGGSFPVRRVYCIGRNYAAHAIEMGHD PDREAPFFFQKNPNNLDSTGTFPYPPHTSDVHHEAELTVVLKAGGTNIAVENALDLVY GYALSLDMTRRDLQGEMKKAGRPWEIGKAFERSAPIGPIHIVSEVGHLDSGAITLKVN GELRQQGDLNQLIWKTSEMISYLSEYFELAAGDVIMTGTPSGVGPVVKGDVMEMEIAG LGSLTVTVT" gene complement(143852..144766) /locus_tag="SKA53_00729" CDS complement(143852..144766) /locus_tag="SKA53_00729" /note="COG1910 Periplasmic molybdate-binding protein/domain" /codon_start=1 /transl_table=11 /product="DNA-binding protein, excisionase family" /db_xref="CDD:11619" /translation="MQNYPDDESTRSGVPSLMTTTEVAEYLRVKQRTIYEMVTRQTIP FTRATGKLLFPRRLIDVWLEAQTEAPVTGAFRAAPIYAGSNDPLLEWALRQSGAGLAV LTHGSTHGLRELADGRAMLVGSHLLDAASGEYNLPAVQSFLPGGGFVMVHWARRTMGL LTGPGNPRAIKRLEDVVSQRLRFAARTEGAGSQQLLDVLLGRAGLTADDLQFAPRQAE THADLATMIEIGEADCGIGLQAVSGQLGFVPLVGNESFDLIMRRRDYFEPQVQALLAF ARTDAFAARAAHLSGYDVTELGKVRWNS" gene 144857..145552 /locus_tag="SKA53_00734" CDS 144857..145552 /locus_tag="SKA53_00734" /note="COG4662 ABC-type tungstate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="sulfate/tungstate uptake family ABC transporter, permease protein" /db_xref="CDD:13805" /translation="MDGPFLIALGLIASGDPALTDIIALSLKVTLTAVSIGCLIGLPL GAGLALAQFPCRGAIVVAFNALMGLPPVVAGLLVYLMLSRSGPLGDLALLFTPTAMVI AQAILILPIVISLTRSVVEDLWAEYREQLRSLGAGRLRAVPTLLWDGRVSLVTGILAG FGRASAEVGAVLIVGGNIAGHTRTMTTAITLETSRGSLGLAVALGIILLLITLSLNAA AWGLAQSARGRLG" gene 145513..146286 /locus_tag="SKA53_00739" CDS 145513..146286 /locus_tag="SKA53_00739" /note="COG1135 ABC-type metal ion transport system, ATPase component" /codon_start=1 /transl_table=11 /product="sulfate/tungstate uptake family ABC transporter, ATP-bindingprotein" /db_xref="CDD:10855" /translation="MGAGAIGTGTVGMKVDKVIAPAQSILPLQLRAVGYSVGKTRLLD GIDLTVRAGKRLVVMGPNGAGKSLLLRLCHGLIAPTSGSVSWQTQDPRPAAQAMVLQR PVVLRRSVRANLDYPLALAGYARAARDEMVQKTLARFGLIALAERPARLLSGGEQQRL ALARAWALRPQVLFLDEPSAALDPSATRAIEDLIGQFSAEGITIVMTSHDLFQARRLA QDIAFLHRGRLIEHGPAAQFFDAPQTPQARDFLGGALIW" gene 146294..147133 /locus_tag="SKA53_00744" CDS 146294..147133 /locus_tag="SKA53_00744" /note="COG2998 ABC-type tungstate transport system, permease component" /codon_start=1 /transl_table=11 /product="molybdate or tungstate transport" /db_xref="CDD:12341" /translation="MINKEKINMFSNTRAILLCAVSSLGSIVAVPAFAQDFITVASTT STENSGLFGHILPLFSEETGIEVRVVAQGTGQALETGRRGDVDVVFVHARSAEEQFVA EGYGVARFDVMYNDFVIVGPDSDPADTRAAQNAMEAMTAIAQAGAAFASRGDDSGTHK AEQALWSAAGIVPEGAWYLETGSGMGATLNTAVQVPAYALTDRGTWLSFANRGDLTIT YEGDPVLFNPYGVILVNPERHAHVKAQEGQAFIDWLVSDAGQQAIAAYQVGGNQLFFP NAQ" gene complement(147288..148856) /locus_tag="SKA53_00749" CDS complement(147288..148856) /locus_tag="SKA53_00749" /note="COG2268 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11974" /translation="MSALGWIIVIVIVAAIFIALAASFYQRATNEVALVRTGLGGRRV VIDGGALAIPFFHEINRVNMQTLRMDVARSGEASLITKDRLRVDVGAEFYASVTPNDN AVTRAAQTLGKRVFQPDQLKSLIDGMMIDALRSVAAQMTMDELHENRASFVKQVRDAL TDTLANYGLQLDSVSLTALDQTPFAALDENNAFNAVGMRKLAEVIAKSKKERAEIEGD SQVSVARAAMESERRKLEIDLEQRRAEIAQTQEVETLMAAQISEIAVRRANSERTAAQ ARIQMEQDIASADIAKELTLRRAEIAQALALEVAEQDRAISFAAKSQEESRAHADADT ARIDAVKASVAVQTARQMAEAERRKALTLLAAQEQAEAAAVRAKITAASDKATAADKT AAKREEAEALKAMKLAETEARLAQIQAENARSEAQVAMEVELARLQALPKILAEMVKP AEKITGISINQISGLDRKGGDGPTSPINQTVDAIMDMAVSLPALKKLGKNIGVEIDTN LLKTSPKPKNDHEG" gene complement(148870..149676) /locus_tag="SKA53_00754" CDS complement(148870..149676) /locus_tag="SKA53_00754" /EC_number="1.1.1.50" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-alpha-hydroxysteroid dehydrogenase" /db_xref="CDD:10756" /translation="MSWERAPLLKGKTIVVTGSASGIGQETARVCSAMGARVLGIDVT KRFDHVEEFYRADLSDGATIDALIDVLPKGIDGIANIAGLPPTAPADKVVAVNLFGLK HLTLGLIPKLNDGASIVNLASLAGFGWPDAVHAIRASEDVHVDDAARFAVDHQITNEG GRSYFFSKEALIAWTMQNRWTWRDRGIRMNAVSPGPVDTPILGDFLETLGARAEEDAR IMDRPGTPQDLAPIVAFLLSDMTTWIRGTNIPADGGMSSNILCEMHGLSS" gene complement(149678..151078) /locus_tag="SKA53_00759" CDS complement(149678..151078) /locus_tag="SKA53_00759" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="Aldehyde dehydrogenase" /db_xref="CDD:10741" /translation="MFDDINPSTGAVWAQVPDGGRTEARDAISAAQAAFPAWAALHFQ DRARILLKAADIWEARKMDFVAAAQAEGGGWFGKGMFEAGYVPEVFRAAAAMCYNAVG EMLPSQHGKISMVQRVPMGVVTVISPWNMPGILTSRGFAFPLAAGNTIVLKPSEDTPY AGGLFFAEIMEEAGIPKGVFNVVTCSRDRVAEMGDELVENPMVKGVSFTGSTPVGRQI AAKAGAHLKKACVELGGKDSLIVLEDADMDRATSAASFGSFMHQGQICMSVEKVLVHE NIYADFLRQFVARAAKLKTGDTADKSNVIGPLINDRQVERVKFQIEDALAKGAKAVLG GRVWDRFVEPTILINVTPDMAVWQDETFGPVAVVVPFRTDAEAIALNNDTEYGLSAGI ITADENRALEMSRKLETGMCHVNCSSVNDEPHVPFGGSKASGVGKHGGKWSMETFTET RWITLDRGGRPFPAVF" gene complement(151146..152291) /locus_tag="SKA53_00764" CDS complement(151146..152291) /locus_tag="SKA53_00764" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="putative branched-chain amino acid transporter ATP-binding protein" /db_xref="CDD:10284" /translation="MLELNNVTVSYGQHRALENASVKVSKGEIVVILGANGAGKSTLL KAASGICEGVVAGEIRLEGTDLLGLPANKIVDVGLALVPEGRGVFPDLSVRENLTLGA YSARAREDERVTLERVFTLFPKLSERTKQIVGTMSGGEQQMVAIGRAMMSNPTILTLD EPSLGLSPLLSKELFQNLARVKDLGIGVLMVEQNAKQSLAIADRGYLIENARVVHEDS AANLMRDPAVQAAYLGVGSSEPAAKVSATTTIPDTGSESFTIRPRSQKTQSADAILGR SVADLVAAASSQSVSANAQKRPSTSHQTKVVVPSDRLAAALAQIESGAINARKRPKPQ LLTHRQSIPPSLDRSPEAKPCPVIEVYRAPRVEVYRRQPDGNGFERK" gene complement(152284..153015) /locus_tag="SKA53_00769" CDS complement(152284..153015) /locus_tag="SKA53_00769" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="putative branched-chain amino acid transport system ATP-bindingprotein" /db_xref="CDD:10285" /translation="MTNHVLSLRGVTKRFGGLVAVNAMNFDVAEHEVVGLLGPNGSGK STTLNLISGALPLTAGNVSLWGSRISGLPAQTINRKGVSRTFQLVRLLPSMNVRDNVV VGAVFGHRRRWGHDANEHAEKLLERVGLGGKGDMSLGQLTYIDTKRVELARTLASDPK VLLLDEWLAGLNPTELQIGINLIKSLRDEGRTIILVEHVMDAIRSLCDRCVVMAAGTK IAEGTPTQVLSDKKVITAYLGDDDA" gene complement(153017..153952) /locus_tag="SKA53_00774" CDS complement(153017..153952) /locus_tag="SKA53_00774" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC-type transport system permease protein II (probable substratesbranched-chain/neutral amino acids) 2" /db_xref="CDD:13442" /translation="MSLTGTDTRNVLLATLGFGVCALLPFADTGYWLGLGVTIAMFTA LATSWALFSGPTHYISLATAAFFGVGTYVTGLGIETLPFWALVGLAGLIGAGLAALVG LATLRLSGVYFVIFTLGLAELVRQVITWVQNNTGQKGLYVLTDLDEAGIYWWLLGLCA AVFLTGWLIGRSRLGFALRIIGDDEIVAAHSGINTARAKILLFMVPGAVAAMTGAILA PRYVYIEPSLAFAPILSFQVVIMALLGGASRLWGPVVGVIPFTFLLETVSSNFPNQTT LVIGVAFLVIVYLLPNGFVGLLDKVLHRTKANEVT" gene complement(153949..154815) /locus_tag="SKA53_00779" CDS complement(153949..154815) /locus_tag="SKA53_00779" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="high-affinity branched-chain amino acid transport system permeaseprotein livh / high-affinity branched-chain amino acid" /db_xref="CDD:10430" /translation="MDILITGILLGGTYALIAMGLNLQYGVARIMNLANGEVLVAGGY FAFIAYTSTQLSPVLTIFVVAPIAFGLNWLIYVLMLQPLVSRAKNRGQLERDSILATF GLSFIGVGLMLSFFGGDYFSYSFLAVPVELLGNTYGANRVLSFVMAVVICGALYLWLN RSRAGLAIRAIATAPASARLVGIDVKNLSALAFALGGAVTAVGGALISTYLTLDASTG VVFTLKALIIVIMGGVGDVRGTIVAALLLGVLETVVASLLDPGLTLAAAYVMFLGILL FRPQGLFGKKVT" gene complement(154872..156071) /locus_tag="SKA53_00784" CDS complement(154872..156071) /locus_tag="SKA53_00784" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="Putative branched-chain amino acid transporter substrate-bindingprotein" /db_xref="CDD:10552" /translation="MNRRPFLKLVSALTIASALAANAANADTIRIGAVAPKTGPLAGG ATVTQWPSIYLWVEQVNAAGGLTVDGEKMLIELIEYDDQTNPGETIKAVQRLATQDDA HFIIAPYGTGLNLAAAPLFDRYGYPQIAVSAITDQQPELAAQFPNMFFTLGTTTALAA DVVAVLSDMRDAGQMGDKVAMVNVADAFGIELATAARPLFEAAGFEIVYETSYPLGTQ DLSPVIKGAAAAAPDAFVAWSYPPDTFGLTEQAMIENLDVKAFYTAVATPFPSYGARF GAAAEGVLGAGGVNPDSPAFMEYAAAHEAVTGAKPDYWASATTYASLEILAQSIEAVG LDRAAVTAHLKQSSFDTILGPISFDENNSNADFWTVGQWQGGVFKGVASRGRDGTSPV ILKDGWE" gene complement(156122..157507) /locus_tag="SKA53_00789" CDS complement(156122..157507) /locus_tag="SKA53_00789" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10741" /translation="MHRPAVRLDLISGANAAAFAVDAAVNAAASAFPEWSRWTTAERA KIMRNLMPALDAHRREFSALAAEEVGASRSWTEFNIDLAIGMLAHVASLGPALEDRLI IDPQSGKRSVIRRQPAGVALGMVPWNAPITLGVRAIAGALMCGNTVVMKGSERCPKTH QYLVDVLNASGLPKGVLNCVISSAEDAHDTMVQLIAHPCIRRINFTGSTRVGRDVAME AARHLKPVLLELSGKAPLIVLEDADLDAAVEAACFGAFFNQGQICMSTDWIIVVKAVA DTFVAKLEARTRQIVAADPVYEAATLGRMISAEAADRVNGLIEDAVSKGARLLVGGQI DGCVMQPALLDGIAANMRAYREETFGPLASIMRVHDADEAVSIANDSQFGLNAAVFSR DLDRAQAIADRLEYGVVQINGPTVHDDPSMPFGGMKQSGFGRFGGEQAINEFTELRWI ATHQDGRSPTL" gene 157649..158560 /locus_tag="SKA53_00794" CDS 157649..158560 /locus_tag="SKA53_00794" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /db_xref="CDD:14970" /translation="MKKVITGLATHQTTIHADVFHGGLGDRFLGGLVDFPGRTTRCLL VLSGSAVRLTPDSEETIVGPAINWGPKDLDTRIKAKAGSNGVIMTLGDTTLSDAIGHK PEVAALRLMSGREFTLNLREKPDIVQTLSTCFAAIFKELDAAQTGMETVIEAQIRIML VSLWRAGVNEMIEDQSYKTANLTLERFRHLVEAHLRDRWPVKRFAAELGVSPDRLHDI CTRTLGKPPQRLIRDRLTFEAQALLQRSHQTLDQIADHLGFSSTSQFSAFFSTELGMP PGAFRKANAEHAGSLQKMPVASYADWP" gene complement(158571..159620) /locus_tag="SKA53_00799" CDS complement(158571..159620) /locus_tag="SKA53_00799" /EC_number="5.5.1.2" /note="COG0015 Adenylosuccinate lyase" /codon_start=1 /transl_table=11 /product="3-carboxy-cis,cis-muconate cycloisomerase" /db_xref="CDD:9891" /translation="MTGFTDHPWLGGLLGDSETTAIWGPAQQMRHMLAFEAAFTAALG AVGRISADKAQQVARLIVEFQPDLDALKTATMRDGVVVPELVAQLKRAAGADAAAIHA GATSQDVIDTALALTIKASNALLADRLSALDASFENLANRFGDQIIMGRTRMQAAMPM RFAERLATWSQPVARHALRLDRLRPEIEVLSLGGAVGDRAALADDANAIAAEMAAGLG LYNPPKAQHAMRDHIADYANLLSLVTGSLGKMGQDICLMAQQGIEEISLQGGGGSSAM PHKHNPILAELLVSNARFNATQLAGIHHALIHEHERSGAAWVLEWMILPQMAAVTARS LSAAQDLCARITRIG" gene complement(159617..160396) /locus_tag="SKA53_00804" CDS complement(159617..160396) /locus_tag="SKA53_00804" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="beta-ketoadipate enol-lactone hydrolase" /db_xref="CDD:10466" /translation="MTFVSLNGATLHYRFRAGSGRPVVFLNSLGTDFRIWDAVIAALP AQTPVLCIDKRGHGLSDGTEITMHHLVGDVAALMDDLGLASALICGVSVGGLIAQGVT TTRPDLVSGLVLCCTAAKIGDAAMWNTRIDAVRTGGLAALATAILERWFSARFIAERQ VELSGYRNMLSRTPVDGYAGTCAALRDTDFTAATRTIRVPTHCIAGSEDLSTPPDLVR GLCALIPGATFQLIAGCGHLPCIEAPHLVAEAINLMHKSIR" gene complement(160422..161258) /locus_tag="SKA53_00809" CDS complement(160422..161258) /locus_tag="SKA53_00809" /note="COG3246 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24077" /translation="MTTPCIICVAITGSLPTKANNPAVPITITEQIESTQEAFEAGAS IAHCHVRDDAGKPTSDPARLARLKEGIEKHCPGMIVQLSTGGRSGAGKERGGMLSLAP DMASLSVGSNNFPTRIYENSPDLVDWLAAEMMTHNVKPEIEAFDLSHIVQATRMAADG RLKGPLYVQFVMGVKNAMPADEPIFDFYIETLKRLAPDAQWCAAGIGPAQLTVNEWAI SKGGHTRTGLEDNVRLDRDTLAPSNAALVRRAVELCAKYDRPVATWQHARNILGLQKS AA" gene complement(161265..161870) /locus_tag="SKA53_00814" CDS complement(161265..161870) /locus_tag="SKA53_00814" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="protocatechuate 3,4-dioxygenase alpha subunit" /db_xref="CDD:12813" /translation="MTMTQSLDYRKETASQTAGPYVHIGLAPGDAGFDIYAHELGHDI AGPNAKGQRIKVTGIVTDGTGAPVKDVLIEIWQANAAGIYPGQGDVEDGFRGWGRVIP DFESGEFTLETIKPGEVVGRDGRKTAPHLNLWLVARGINVGLNTRMYFDDAAAANDKD PVLTLIEQAHRRDTLIAKGDGETYRFDICLQGENETVFLDV" gene complement(161867..162586) /locus_tag="SKA53_00819" CDS complement(161867..162586) /locus_tag="SKA53_00819" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="protocatechuate 3,4-dioxygenase beta subunit" /db_xref="CDD:12813" /translation="MTSELYQRDREWHPPALAQNYKTSLARSPRNALLSIQGSASELT GPTFGHDEIDAIDNDLLRNYAKTGDPIGERIIVHGRVLDENRRPVPHTLVEIWQANAG GRYRHKKDSYLAAIDPNFGGCGRTLTDENGFYRFRTVKPGAYPWRNWINSWRPAHIHI SVFGTAFAQRLITQMYFEGDPLIAKCPIVQTIPDQRAIDQLVAALDLNATIPLDSIAY KFDIILRGSRSTFFENRPEGN" gene complement(162583..162966) /locus_tag="SKA53_00824" CDS complement(162583..162966) /locus_tag="SKA53_00824" /note="COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit" /codon_start=1 /transl_table=11 /product="4-carboxymuconolactone decarboxylase" /db_xref="CDD:10469" /translation="MVDRFDQGMTTRRAVLGNAHVDKAEAAKTDFDLPFQTLITEGAW GSVWASDAITQRERSMITLALLAATKNFEEIPMHIRATARTGASKQDVIEAFQHVAIY AGVPAANHAIKLAKQTYAEMEGEQT" gene complement(163009..164178) /locus_tag="SKA53_00829" CDS complement(163009..164178) /locus_tag="SKA53_00829" /EC_number="1.14.13.2" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="4-hydroxybenzoate 3-monooxygenase" /db_xref="CDD:10524" /translation="MKTQVAIIGGGPSGLLLAQLLHRHNIESVVLERKTKDYVLSRIR AGVLEQGLVKLMEEAGCADRLHAEGYEHDGTLLSYGDEMFRIDFTEHTGTPVIVYGQT EVTRDLYAAREKAGGLIEFNVDDVVIHGADSDAPYVTYRVDGEDRRLDCDFIAGCDGF HGVSRQTIPLDVRREYEKVYPFGWLGILSETPPVNHELIYANSPRGFALCSMRNENLS RYYIQCSLSDKPEDWTDEAFWQELKRRIPADQAARLVTGPSIEKSIAPLRSFVTEPMR WGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLYHGLTDYYARGSTEGIDRYSEKALAR VWKAERFSWWFSSMMHRYPDQSEFDLKMQVADLEFLRSNKAAQKAMAENYVGLPY" gene 164274..165185 /locus_tag="SKA53_00834" CDS 164274..165185 /locus_tag="SKA53_00834" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="pca operon transcriptional activator PcaQ" /db_xref="CDD:10453" /translation="MDRRIKFRHLNAFSTIARAGSLKRAAEQMNLTQPAISKALKELE EIIGVVLLARSRAGVQLTAEGEIFLQFAEQSISALRHGLRNVRATGLSAGKLRVGALP SVVSHLLPQAVSDFGETNPDTLLELHEGPHQDLVTRLRNGGLDLVVGRLGRPETMTGL EFLQLYTEQVVVVAHPDSPAVSVRQWQDLDRFRVLYPPQDSAIRSLIARLLISQGVPL FTNRIESASSAFGRAVTLADPQTVWVISYGVVAGELAEGRLVALDLDTSATTGAVGIM SRSQEVRSVEARAFISALLRAAPDAMA" gene complement(165188..166465) /locus_tag="SKA53_00839" CDS complement(165188..166465) /locus_tag="SKA53_00839" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10524" /translation="MTHPDVLIAGGGIGGLSLALTLHQIGVSCRVIETSPVMKPLGVG INIQPNAVRELFDLGFTEQDMNSVGVPAREWALVGLNGKEVYAEPRGLEAGYEWPQYA AHRGAFHMLLYRKVIERLGADAVLLGSRVTGWRQSDTGVTAVVTGSDGRTEDQTAQLL IGADGIHSAIRAQMHPDQPPIHWGGAVMWRGTVRAKPMRTGSSFVGLGTHEHRMVIYP ISAPDSEGYAQINWIAEVTRDNAGGWQEQGWFRPVEVADFAHHFDQFRYDWLNVPEML AQTDCAYENPMIDRDPIPTWVDGPVALMGDAAHAMYPTGSNGASQAIVDARVIGAKIL ELGVTPAALSAYDAQLCAPISALVLRNRGAGPFGLLNLLDERCGSVFEDIEDVIPAQE RSEFMATYKAAAGFAIERLNAAPATLPVGARVS" gene complement(166489..168009) /locus_tag="SKA53_00844" CDS complement(166489..168009) /locus_tag="SKA53_00844" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase family protein" /db_xref="CDD:27628" /translation="MTAFVAPTEDILFSLHHVAGAGALAAWDPELAGDILGHFAGFAE RVIAPLNAVGDRQHAQLVDGRVRMPDGFVAAYAQLAQDGWQGLTAPAAFGGMGASPLI AAGVSELFSGANHAMQMVCNLVPGAIATLMKYGTAAQQNAWIPKLASGAALSTMCLTE AQAGSDLSAIRCRAENTGDGWRITGEKIFISGGDQDMSAEILHLVLARSSAANAGMNG LSLYMCPAQPDVSVTRIEEKMGLHASPTCQLRFDGAKAELIGTEGQGLQAMFTLMNHA RIDVALQGVAHASRAADIAAAYAAQRIQGRQPHGSPALLNQHADVQRMLDDQRHLALG ARAMCHIALVAVETADSPALCDFLTPLCKVFCSEAGIRAADLGIQILGGYGYLNEYGL EQIWRDARICAIYEGANGIHERSIATRGLRAGGGADEFADLVTDLAHGSAPVLQRLAD WQILRSAMSQTSDPLPQAHAFAQQTANLFFAAAWARIDAVAENHNSPSELRRLHRR" gene complement(168018..169196) /locus_tag="SKA53_00849" CDS complement(168018..169196) /locus_tag="SKA53_00849" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="cytochrome P450" /db_xref="CDD:11832" /translation="MPNLAPLDEQITLDQLDRDPFPIYRRLRAQAPVLRVKSAGRTLL TKAVDTKYVKDNPEIFSSDDPNTPMKRAFRAHTLMRKDGDEHRRERMAMAPAFTAKVI QTDWMPKYEQIAREYVSRLPRGEIVDLFAILSGAYAARGLAILLGMEDASDEDMLEWS QALIEGAGNFGWRDEPFARSDRANDAIDALLDRIQDRHRAAPNNSAFSVMLNAEDPIP ISQIYANIKIAIGGGINEPRDALNTIIYGLLTNPDQLAEVKRREDWDKAFEEGVRWVA PISASSRLVTVDTEIRGYLIPKGDTVMTIQASANRDEDFFDNGEVFEVYRDKNPHQSF GNGPHFCQGTHVARRAVGKVMLPILFDRFPNMEIPDTDAVIWRGFGFRGAVQIPVLLK " gene complement(169224..170114) /locus_tag="SKA53_00854" CDS complement(169224..170114) /locus_tag="SKA53_00854" /note="COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11867" /translation="MVDFTKVKAIDFHTHAEEPCCDHRDDGYNEFQAGMAAYFKNPAG AQGMLPTVQDTANYYRERNIAAVIFPVDAERETGFRRYSNEEVAGICAENDDILIPFA SVDPHKGKAGAREVRRLVRDFGVRGFKFHPTMQGFYPNDRETAYTVLEACAEEGAITL FHTGQTGVGSGMRGGMGMRLKYSNPMYLDDVAVDFPDMPIVLAHPSFPWTEEGLAVAQ HKPNVYYDMSGWSPKYFPETFIRYANSILKKKMLFGSDWPAITPDRWLADFEAAAFKD EVRPLILKENALRILGEATS" gene 170211..170996 /locus_tag="SKA53_00859" CDS 170211..170996 /locus_tag="SKA53_00859" /EC_number="4.2.1.17" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /db_xref="CDD:10752" /translation="MMQSSARDTSVTRVEFDGDIATIIFNRPEKRNAMNDALVDALDA FFSNPPEGVSAVILRGEGGHFCSGLDLAEHESRKPIPGVYHSRNWHRVSELIEFGGLP VISVLTGAVIGGGLEIATSTHVRIAEPSVRFQLPEGRRGIFVGGGATVRVGRILGADR MREMMLTGRSYGAEDGLALGLTHYAVAEGEGVPLALKLARRIADNAPFSNYLMINAIS RIGDMSRSDGMFTESLAAAMSQSSAGAQEGLRAFLEKREPKFR" gene 171135..172118 /locus_tag="SKA53_00864" CDS 171135..172118 /locus_tag="SKA53_00864" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctP subunit" /db_xref="CDD:8627" /translation="MAFAQDATLRFHQFLPPVAPLPAFAFKPWGERLEAASGGRLRIQ HFDAMALGGRPPELLDQARDGVVDIAMSVVGYTPGRFPRTEVFELPFIMKNSIATSLA FQQMIEEDFGESEYGDFKVLAGWVHGAGLIHSEEPITKLEDMAGKTLRGPTRIINDLL SELGAEPVGMPLPAIPEALSKGVINGTVIPWEVTPSIRLAEMVSNHTEFGGPEALYTA TIIMVMNKDAYDALPDDLREILDAESGAAMAQAFSQVMLDYDAPGRQIALDAGNTITT LDEAEVARWKAAAQPVIDRWVADMDAQGIDGQALIARAKELIDEKSAMLGV" gene 172240..172716 /locus_tag="SKA53_00869" CDS 172240..172716 /locus_tag="SKA53_00869" /note="COG0531 Amino acid transporters" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MALAGGLLLLVIIVLTCVSIIGRALFSSGICCGPIRGIYDYTEI AVGAAIFAFLPWCQYQAGHAAVDLFKPAFPDGVNRLLNLVIDIAMLVLASLIAHRLWL GMLDKERFGETTLIAQVPVWIGYAACLVGAVGFVLVAAFCVLRALRGLIGLEPVVE" gene 172722..174053 /locus_tag="SKA53_00874" CDS 172722..174053 /locus_tag="SKA53_00874" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11306" /translation="MSDLALALWSFPVLLLLVFLRVPIALAMMSVGIGGAYLVYGTAL PVLNAFKNVTYGTFSNYSFSIIPLFLLMGQFATLSGMSAALFRAAESFLGHRRGGVAM SAIGACAGFGAICGSSLATAATMGQVALPELRRYGYPGSLATGALAAGGTLGILIPPS VILVIYAILAEQNIEKLFVAALIPGILAALGYILAISVWVRVSPNAAMVKDRVPWAER LVALAKVWPVLTIFVVVVGGIYVGVFTPTEAAAVGAAGTGLISVVSGQMTWPRLKQAI LATASASAMIYLIILGAGFYNSFLALSQLPQTAAAWVGGAGMSPWIVLVIVLFMYLVF GCVMDSLSMVLLTVPIIYPIMIVLDFGMSPQDFGLWFGILVLIVVEVGLITPPVGMNL FIINGMAKDTPIKETYKGALPFVVTDLIRVAILTMFPAITLWLVWFIDSLG" gene complement(174060..175847) /locus_tag="SKA53_00879" CDS complement(174060..175847) /locus_tag="SKA53_00879" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="feruloyl-CoA synthase" /db_xref="CDD:10192" /translation="MSQPIPSISGDFWAPTFAYEHRPDGTVVMRQEGQLPDYAPLLAD YMDKWADATPHMTWIARRKDGGEWRHITYAQGRAQAKAIGTALLDMGLGPQRPLLILS ENSLEHALLGMACAYVGVPYAPLSPAYSLVSTDHAKLRNIAALLKPGAIFADNGKAFA NAISAINNTDTTVINLDNPISGAVRFADLLDADPAPSQAARARLTPDTVVKYLFTSGS TGSPKAVINTNRMICAMQAIVRDCYRFLTHEPPVVLDWGPWNHTAAGNKVFYLVMTNG GSYYIDDGRPVLGKFDETLRNLRDISCTWYFNVPIGYDMLVDQLENDPALAATFFNKL GMMFYAGAGMAQRTWDRLRAAGRATTGHEVLLATGLGATETAPFALACTVPQEKSGNV GVPSLGLTIKLVPNGGKLEARIKGPTIFPGYYGDPAQTAQAFDDEGYYCMGDALRPAD PDDFSKGFFFDGRIAENFKLATGTWVAVGAMRAKLVDSMDELIRDAVIVGENEAELGA MVLLSQAAQTMDQAILHAALSEKLAAAAKDASGSATRVRRIIVLSEQPSFDRGEVTEK GSLNQRAMRSNRATSVAQLYSDDPAVIAV" gene complement(175864..176631) /locus_tag="SKA53_00884" CDS complement(175864..176631) /locus_tag="SKA53_00884" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="possible 3-hydroxyacyl-CoA dehydrogenase type II" /db_xref="CDD:25396" /translation="MQDWSGHGAIVTGAASGLGAATAERLAASGLKVTVFDMNDDAGR RQADKIGGCFAHVDVADPHSVADGITKAEAAHGPIRILVNCAGIGGASKTVSHGKAHD PAVFERVIRVNLMGSFNCASQAAARMVAQDPIDPDGARGVIINTASVAAYDGQIGQLA YAASKGGIVGMTLPMARDLAAKGIRVCTIAPGLFLTPLLHELPAEVQASLGAQVPFPS RLGDPREYGEMVDHITRNPMLNGEVIRLDGAIRMAPR" gene complement(176631..177113) /locus_tag="SKA53_00889" CDS complement(176631..177113) /locus_tag="SKA53_00889" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="bacterial regulatory protein, MarR" /db_xref="CDD:15281" /translation="MAPRALAKQTNAEMPDVVSDLEILIGYNMKRAYVAIQKDFRAAL GEGGLSPRTFSALSLVVAHPNISQSSLARLLGIERSGLVAIIDELERRNYLTRSHVPG DRRVQALVATHEGNAAYQATLATVQAHEERLLATLSATEKHTLMQILIKIRLTDKEDI " gene 177204..177668 /locus_tag="SKA53_00894" CDS 177204..177668 /locus_tag="SKA53_00894" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNLPEPKLEWVTDMIVELDPIRAMGQGRAGVRRIIPIVGGTMSG PKLQGKILNVGADWQTLFADGLAELDTRYALETHDGATIEICNYGFRHGPKDVIAAIG RGEDVAPDSYYMRTHARLETGDSRYAWVNHTLFVGVGARKEQSVLMRLYALM" gene complement(177871..178668) /locus_tag="SKA53_00899" CDS complement(177871..178668) /locus_tag="SKA53_00899" /EC_number="4.2.1.-" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="carnitinyl-CoA dehydratase" /db_xref="CDD:10752" /translation="MMQMRSDGPIHTRREGAVLEVTLDRPKANAIDLATSRIMGEVFR DFRDDDSLRVAILRAAGDKFFCPGWDLKAAADGDAVDADYGIGGFGGLQELPHLNKPV IAAVNGICCGGGLELALSCDLILASDTATFALPEIRSGTVADAASIKLPKRIPYHVAM DLLLTGRWFDAHEAMHWGLLREITTPADLLPKAWALARMLENGPPLVYAAIKEIVREA EAMRFQDALNRVTKRQFATVDQLYASDDQKEGARAFAQKRDPVWTGR" gene complement(178665..180575) /locus_tag="SKA53_00904" CDS complement(178665..180575) /locus_tag="SKA53_00904" /note="COG1042 Acyl-CoA synthetase (NDP forming)" /codon_start=1 /transl_table=11 /product="putative acyl-coa synthetase protein" /db_xref="CDD:10769" /translation="MGFDGPVWPVHPTRDQIAGVRCYPSLADLPGAPDATFIGVNRHA TLDVVTELAGMGAGGAICFASGWRETGDGDLQDRLVSRAGTMPILGPNCYGVINYLDG ALLWPDQHGGRRVARGVALISQSSNIVINLTMQARGLPIAYVACLGNAAQVGLAQLAR ALLADERVTALGLYIEGLGDAAGFATVAEAAQTAGKGIVAIKSGKTAAAQTAAASHTA SLAGGGAASSAYLRQIGVAEVNTPAELLETLKILHLHGPGLGRQLCAVACSGGEAGLV ADLAAPLALEFPPPGPAQVGHLAATLGPLVTIANPLDYQTFIWGDGPRTTEVFATMLA GYDAGLFIIDPPRPDRCDPASFAPALDAIVAAARATGKPAFPVASLPENFEEDRAIAL MDQGIAPLMGLETALAAVRAAQVTAGRAGWRNWTPIARTGPLTLLDEAAAKARLAAAG IAVPRGVTAPTITSLQSAAHDLTPPLALKGLGFAHKTEAGAVRLQLVTLDGQEQMPGA IGYLAEEMVTDAIAELLLGARRDPVYGATLTLGFGGVAAELLADTVTLVLPVTAPEIA DALRRLTLWPLLDGYRGRPRADLGAVIRTALTLQEMLATDRMLEEIEINPLMVGADFA VAADAVIWKDTP" gene complement(180922..182085) /locus_tag="SKA53_00909" CDS complement(180922..182085) /locus_tag="SKA53_00909" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase (EC 1.3.99.3)" /db_xref="CDD:27633" /translation="MHFAMTDEQRMIVDTTRAFVEAELYPHEALVERTGHLPMELIRE IQAKAMAAGLYAANMPEEVGGAGLDTLSWLLYERELGRANYALHWTCVARPSNILLAG TKAQREKYLFPCLRGETWDCLAMTEPGAGSDLRGMQANARQDGGDWVLNGTKHFISHA DIAGFTIAFMATGEEDTPRGPKKKITAFFVDKGTPGFTVREGYRNVSHRGYSNAILDF DDCRVPAENILGEIHKGFEVANDWLGATRLQVAATCLGRADRALDHAVHYAAERRQFG QQIGKFQGVSFKLADMAMELKAAELLTWEAGWKFDQGSVTEADMAMAKLKASEVLAMV ADEAIQIHGGMGLMDDLPLERIWRDARVERIWEGTSEIQRHIISRQLLRPHEG" gene complement(182085..183527) /locus_tag="SKA53_00914" CDS complement(182085..183527) /locus_tag="SKA53_00914" /EC_number="1.1.1.157" /note="COG1250 3-hydroxyacyl-CoA dehydrogenase" /codon_start=1 /transl_table=11 /product="3-hydroxybutyryl-CoA dehydrogenase" /db_xref="CDD:10967" /translation="MKAAIIGGGVIGGGWAARFLLNGWDVAVFDPDPDAPRKIAAVLD NAKLSLPALSDVPLPAMGQLSYAATLAEAVTGADYIQESVSERLDLKHRVYAEIQKAA PDTPLGSSTSGYKPSQLQEGAINPATIFVAHPFNPVYLLPLAEVVPSPATDAALIEGV KDTLRSIGMFPLHVRKEIDAHIADRFLEAVWREALWLVKDGIATTEEIDEAIRMGFGL RWGQMGLFETYRIAGGEAGMKHFLEQFGPCLTWPWTKLMDVPEFNDELVDLIAGQSDA QSGHHTIRELERIRDSNLVGFLRVLKDRDWGAGRVLKAHDAARRDVVQTPDADAPLVR LQVLPSWIDYNGHMTESRYLFAGSETSDTLLRLIGADMDYVAGGHSYYTAETHIRHLG EAKLGDHLTGSVQVLGADDKRLHIFITIAKDGDAVATLEQMLLHVDMAAGKTCPAAPT VLDRLFAIRDAHASLPRPAGAGRHIGQGKS" gene complement(183524..184363) /locus_tag="SKA53_00919" CDS complement(183524..184363) /locus_tag="SKA53_00919" /note="COG3246 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24077" /translation="MSPHVPRSPEQIATAAIDAAKAGAAIVHCHVRDPETGKPSRDPA LYREVTERIRDADTDVILNLTAGMGGDLVFDGTESMHRMSQTSDMAGAAERVQHVLDC RPEICTLDCGTMNFAEADYVMVNTPGMLRDMATRMVASGVRIEIEAFDTGHLWFAKQL VAEGIIPDPVLVQLCMGVPWGAPDDLNTFLAMVNNVPAHWHWSAFALGRHEMPYVAAA VLAGGNVRVGLEDNLYLSKGVLATNAQLVEKATTIIENMGARVIGPDAVRDRLHLTKR APL" gene 184476..185465 /locus_tag="SKA53_00924" CDS 184476..185465 /locus_tag="SKA53_00924" /note="COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /codon_start=1 /transl_table=11 /product="transcription regulator" /db_xref="CDD:14108" /translation="MAIYENVMTISESIFAPSTQPLDIAVLVLPRASILEVASVLDPL RNANRHLGQDRFRWRVVSPSGADVALTCGIALPAIGPLAAADGADALIVVAGYNQSEV ATRPLIADLRRVAGRFRAVGAVDAGPWVLARAGLLDGHRATVHWEDLEDFASAHTSVD VVPDRFVISRNRFTAGGAAPAADLMLHLIGARCGAGLAGQVAASFQYEPQSDGSRPQR PGLLPVVGDVRLAGALALMNAHLEDPLPLDTIARAQGVGLRRMEQLFRDNLGQGPGAA YLDLRLQMARRMVTDTRHDLRAIALRCGFVDPTSFSRAFRRRFGVPPSRIRSS" gene complement(185452..186999) /locus_tag="SKA53_00929" CDS complement(185452..186999) /locus_tag="SKA53_00929" /note="COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9904" /translation="MTTVAQSLVRWLQQMGTEVIFGIPGVHTIELYRALPDAGIRHVT PRHEAGAGFMADGYARVSGRFGVALVITGPGLTNILTPMAQARADSVPMLVISGVNRR DSLGKGLGHLHELPDQLALSATLGPAFHLDRADDLPAILDQIAGALTNGRGGPVHLQI PLDLMAAQAPDAPSRIADQAAAAVPDVSAANALLAQALRPVIVAGGGCRRAGAALQAL ADRLGAPVILTTNARGLMHAHPLVVPAAPSLAPVRELIASADQLLVLGSEIGPTDWDM YDDGGLPDLAGMIRVDIDAAQLARHPAALTLQGDLADILPLLHGATSADGAQRAAQAR NAAHAALPAGYAAEIALLNRLRDSCPDAIMVGDSTQVIYAGNLYYDHDRPCGWFNAAT GYGALGYAPGASVGAALAAPDARILCLIGDGGLMFSPAELLTAVEENLNITFIVFNNA GYGEIASAMKAAGAQVLGCTPRPPDFADLARACGLPFTRTTPDAIDATQSGPRMIEVT LPPVTTT" gene complement(186996..188177) /locus_tag="SKA53_00934" CDS complement(186996..188177) /locus_tag="SKA53_00934" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase, putative" /db_xref="CDD:10310" /translation="MMQYADVTTRLAGLGSDKWVLSAAANARIRAGEAIINLTIGEPD VPTPAALIDSAITAMGAGRTGYSNGRGEPSLLNALSGKYSALTGRSIGTDRFLCLPGT QTSLYLVLTALCDPGCEVILGDPMYATYEGLIRASGAVPVPVSLDPAHAFRLQAADVA AAITPATRVIMLNTPHNPTGAILRPADLDAICALAAQHDLWVVSDEVYGNLTHDGAVF TSALANPTYEDRVIVTASISKSHAAPGFRSGWVCGPAAFCTRALPLSETMLFGSQPFI ADMTAQAVAGAPDLATAMAARMARRAGIIHAALDGVAGLHVHKPEAGMFALLDIRALS RDSKAFALALLEAEAVAVMPGASFGKAFEGWLRLALNASDDATREACTRIKRFAMSWP R" gene complement(188178..188807) /locus_tag="SKA53_00939" CDS complement(188178..188807) /locus_tag="SKA53_00939" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /db_xref="CDD:7613" /translation="MTARRTFIRAGEEARRLALIDATLDCIAEGGPQAATVRAIALKA GVTPGLIKHYFDTKEDLVASAHETLMTRMTEASAAALDDLPADPVARLAGFITNAVTP PVVDPRAMALWAASMQLVPRDAAMRDVHEATYLAFRDRLERMIANALAAAGKPHDTAT TRALAIAGNALLDGLWIEASVLPDQFAQGEMRSIAIRAFARLLDLKLSE" gene complement(188804..189673) /locus_tag="SKA53_00944" CDS complement(188804..189673) /locus_tag="SKA53_00944" /note="COG1834 N-Dimethylarginine dimethylaminohydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11544" /translation="MQFGAEDRSKPLAAVIMRAPGPAMAKARPQDWHYGAGFDPARAE TQHAELARIVTASGAKVHWMPSADDSLSDAVFVQDPSFVTRHGAVILNMGKALRRAEP DMHAAFYDSIGVPVIGRLTGDATVESGDCFWLDPQTLAVGRGVRTNQAGIAALSDILR PYAINVQAYDLPYWTGPAACLHLMSLVSPLGPDIALIHAPLLPYALWSDMRARGWTLL HAPEDEFMASNGLSLNVLALRPRDVVMVDGFPQTRTLMEDAGCKVQVFDGDALCIACE GGPTCLTRPVLRA" gene 189722..190633 /locus_tag="SKA53_00949" CDS 189722..190633 /locus_tag="SKA53_00949" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="polar amino acid uptake family ABC transporter, periplasmicsubstrate-binding protein" /db_xref="CDD:25526" /translation="MARYNHKNVAVAALPVAAFANVASKPALRDHHKKRKSVLTFNKE RKIMKTLALLTTTALIAAAAGLAQAQEVRIGIAAEPYPPFASPDAAGNWVGWEVEIID AVCAAAALDCVLTPTAWDGIIPALVSGRIDTIMASMSITADRMQTIDFSDPYYNTPTV IVGQRNMQMDASPESLAGKVLGVQVSTIHQSYAQAYFEGATELRTYQTQDEANQDLAA GRIDATQADSLAMDDFLATAAGACCEVKGAVAADEAILGAGVGAGVRKGDDALREAIN TGIAAIIADGTYDAITAGYFATSILGN" gene 190759..191391 /locus_tag="SKA53_00954" CDS 190759..191391 /locus_tag="SKA53_00954" /note="COG4215 ABC-type arginine transport system, permease component" /codon_start=1 /transl_table=11 /product="polar amino acid uptake family ABC transporter, permease protein" /db_xref="CDD:13467" /translation="MQISLGAFALGLLIGTAGALGKLHGGPVTRDLLAVYTVVVRAVP ELILILILYYAGTDLLNQALRALGQRPVEISGVVAGIAVLGIVQGAYATEVLRGAIQS VPRGQHEAARAYGMGPVQIFRRVTIPAMLPLALPGLSNLWLIATKDTALLAIVGFSEL TLETRQAAGSTRAYFTFFLAAGALYLLMTLLSGRIFGWIEARYRRGQASQ" gene 191388..192179 /locus_tag="SKA53_00959" CDS 191388..192179 /locus_tag="SKA53_00959" /note="COG4160 ABC-type arginine/histidine transport system, permease component" /codon_start=1 /transl_table=11 /product="polar amino acid uptake family ABC transporter, permease protein" /db_xref="CDD:13431" /translation="MNRQRIAQEVFVPHRIIMVAAALGLVVWAALAMRWDWIARYHDL AVQGIWRTLWLLGLSCLIGFALAVPLGLAQAAGPRFLAAPARAFCTVIRGTPLLLQLW LIYFGVGSLFPQFPWIRESELWPYLRQAWPYALLALSLSFAGYEGEVMRGAFKSVAGG QLEAARSMGMGRFAIFRRIWFPQALQRALPTLGGETVLQLKATPLVATITVIEIYAVS SRVRQDTFIIYEPLLLLAVIYMVIAGLLALAFKLLEQRFNRGMLG" gene complement(192157..193263) /locus_tag="SKA53_00964" CDS complement(192157..193263) /locus_tag="SKA53_00964" /note="COG4148 ABC-type molybdate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="molybdate ABC transporter, ATP-binding protein" /db_xref="CDD:13425" /translation="MTLQIKVQHAFAGFDLDVDLDLPAGVSVLFGPSGSGKTTVINAV AGLLRPDQGRIAIGDWVLTDTASRHHSAPHRRRIGYIFQDARLFPHLSVRQNLAYGRW FAPREAKATSMDRTVEMLGIGHLLSRRPATLSGGEKQRVAIGRALLSGPRLILADEPL AALDEARKAEILPYFERLRDEVAVPILYVSHASAEVARLATTVVALRAGRVIACGPPG QVLGDVAVVGARGAASLLTVRVVAHHADGLTELATAAGTLWLPRIADATEATLRVRIM AQDVILSRDRPAGLSALNILQGTISDLRLGEGPGAMVTLAVGEDRLAARITRRSAEAL GLAPGQTCHAVIKSVAVAPDAIGTGLRVSPASRD" gene complement(193260..193970) /gene="modB" /locus_tag="SKA53_00969" CDS complement(193260..193970) /gene="modB" /locus_tag="SKA53_00969" /note="COG4149 ABC-type molybdate transport system, permease component" /codon_start=1 /transl_table=11 /product="molybdate transport permease protein" /db_xref="CDD:13426" /translation="MGGDWANWLGPAEWQAVRLSVRVAFWATVVSLPLGIFVAYALAR WNFWGKQLLNGIVHLPLILPPVVTGYLLLSTLGRRGPVGEVLDAWFGIVLSFRWTGAA VAAAIMAFPLMVRAIKLAIEAVDPKLEAAASTLGASRAWVFTTVTLPLILPGIIAGSI LAFAKAIGEFGATITFVSNIPGQTQTIPSAIYAFLQVPGGQEQATRLVIIAIVIAMAA LLLSEYLARRVAQRVAGS" gene complement(193970..194749) /locus_tag="SKA53_00974" CDS complement(193970..194749) /locus_tag="SKA53_00974" /note="COG0725 ABC-type molybdate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative molybdate-binding periplasmic abc transporter protein" /db_xref="CDD:10594" /translation="MPTAFARQQIVTAFAAAILIAAPMRGVAQDVTVFAAASLTGALD RVAEAWTAETGQTAVTSYAGSSTLAHQIQQGAPADIFISASVDWMDAVAASGDLQGGT RRDILGNTLVLIAHGQDAAPVTIDATLDLAGMLGDERLAMAMVDAVPAGIYGKAALTS LGLWDSVAPLVAQSDTPRTALAFVALNEAPFGIVYATDAAAQDNVRVIGTFPADSHAP IIYPAAITAQSDSANAAAFLDYLSSDNARAIWRAYGFSVVQ" gene 194926..195603 /locus_tag="SKA53_00979" CDS 194926..195603 /locus_tag="SKA53_00979" /note="COG2148 Sugar transferases involved in lipopolysaccharide synthesis" /codon_start=1 /transl_table=11 /product="putative glycosyltransferase" /db_xref="CDD:11856" /translation="MGAVVRGMSDVSRHDGRVGKQACGRAIRPDTGRPRLSKRVFDHV VALLLLGLLVPVGAVLLVLNPFANAGPLIYRQDRIGYRCRRFAAYKFRTMRCATGAAR GAFDALDADRITALGRVLRKSRLDELPQIINVLRGEMSLIGPRPDSYDHACVYLRDIA GYGARHNVRPGVSGLAQVELGYVDGIDGIRRKVALDLHYIAHASFRLDLWIAWRTIIV VLARKGA" gene complement(195600..196325) /locus_tag="SKA53_00984" CDS complement(195600..196325) /locus_tag="SKA53_00984" /note="COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases" /codon_start=1 /transl_table=11 /product="serine/threonine protein phosphatase" /db_xref="CDD:14907" /translation="MLLPDYLPPFGFDAAPPAPDRPFVAIGDVHGRADLLAPVLERAV ARALPVVLVGDYIDHGPDSAGVLRLLHDHAGRIDLTCLRGNHEDLLLRFLRQPRKMGR TWLRYGGRTTLASYGITDLPADITLADLSRARNALRAAMGATVSWMQSMPYWWQSGNV AVLHAGADPARPLANQLPKAMAWGHPDFGVVPRSDRVWCVHGHRIVPRLAIRDGVVSI DTGAWKTGKLCAALIGEGGVRPF" gene 196465..196722 /locus_tag="SKA53_00989" CDS 196465..196722 /locus_tag="SKA53_00989" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPDPFSADYVNLTSPAVAHYVVTPSDSADLPVRPRAIFVQSAGT AALQDKDGQVVTYDVAAGAVLSIRPVRVLASGTTAQLVAWY" gene 196726..198330 /locus_tag="SKA53_00994" CDS 196726..198330 /locus_tag="SKA53_00994" /note="COG3979 Uncharacterized protein contain chitin-binding domain type 3" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIGLELSPASTGHTAPDPLAAFFAIGRGAHVALGPGPQGGLSIW TETGPATAACLRLDGANAGTRLSWRETLSCALRKVYPVAAFGLSAGWSQLQSSGSGLS GSYTGNRAVSTTALTATISVTVDRAKPYDLWVCFTGRIAGGYCRVDIDGGQALVDAIG DPAGLGFKAFSTQTATDMQRRRSIRVATGLTGSHVVTLSHGGAATPGGTSLMIEAVAL SADLSDDGILPPVWQPATAYVMGDEVQWQGTFYAARATGVSGTTPPVHLSGISGDGAL DWRADNRPTYPLFQAVDYASEREYAARVRIAGTTTEIGGQTHGNEALVARSVTLDAQP FVPTTSGTGLSVGAEIATFENTTWQGATGGPIGTCQLIRRITPGAVRHDVQVTATGPD AVFDWLYLGMLPFVHWDGESGALAVQQVAGPAGLISIGDLAGTSPAQISLGATARLGL VGRALTGDLRYGCQVVATGIAGNLVGPVSTFLRPNIEASAAAGPLDWTAKAYFAADLP AGTVMQAGDVIGFSSHHILAVTPVQA" gene complement(198321..200177) /locus_tag="SKA53_00999" CDS complement(198321..200177) /locus_tag="SKA53_00999" /note="COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis" /codon_start=1 /transl_table=11 /product="protein-tyrosine kinase" /db_xref="CDD:12544" /translation="MSQPMPALVEVDQPVAVDIRHIFRVLWAGKWVVVLTTFLAVLMA GYYGFTIARPQHAAVTIIEIRTTQAFAIPGQTSTDVPPGTQVQILLATPILEQVIAKL DLQDDPAFNRYLTPVPPLSPRGLRTTLRNLLQGRSEPVPDDAAIASKLVQNLRAAIRV ETPRDSDLLRVTVTTGDPDRAMAIANTLAAVYLADQVARKQDATAASIALLGARSADL RSHQAAIEAAITDLVARAGLHDPTRPDRLGHDLQDTTTRLASAQAALARASDTANTQR LTAQIAALQTNRADLAAALQALTAASHARDRMQRDLDMAIAQQAGYQQELRALTLGAA QIAPDSRVLNAATEARYIGPQKLLMVQIAAMVGGLGGLMLVALRHSLRRGFTDAAALQ DATGLPVLAQLPLLPSRRPARLLAALDVSTASAATEGYRHLRTALMLHGTKPPQVILS TSAIPGEGKTTQAIGLAHALALLGKRVLLVDADLRRGSFRRYFALAGTDGLAAVILGH IGLGAATEPSPIPGVDLLAGGAQHAAGGETLFAPALADVIAQARAAYDVVIIDAPPVV PVADAVVLAAADKLAAAGVAVTGVTLTQIDIRKQAQRGGVGFAQYGRGYFHA" gene 200319..201551 /locus_tag="SKA53_01004" CDS 200319..201551 /locus_tag="SKA53_01004" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMAFLRYCLNQPVGIAMTVRAALVAGNVAVLFGLALWLGLDGFG GLIVLWGLALVAATCLGFGGPLILLARLGDGAGMHPRAVIGLCIGWPVLAACGAGLAL RLVWPELPWLAVLAVAVVVNLASCLASILRALGSVHLSMILRDGAPMVALGAAGLLLT EPAAILWGMATGLGVICLGAAVLVLSHPQRASVISGNRPGAGLAADLWATTVLGMGLA QVDIIVGGQFLTPEQIGVYALLRRVANLVALPLSVATWVSAGPISAAHTARDTAALQS ASDAGARIAFLPGLGLAMLSLLALPVLAIWVPDLPVPVLLVLLGGTLVQLAFAQGMSV ATLTGRGDLAAGARLAGVAGYVAAVAFFAPLDPLRNALAAALATSLCAGLLWLWVWRS MGIDTLARPMRRRAWQIS" gene 201536..202876 /locus_tag="SKA53_01009" CDS 201536..202876 /locus_tag="SKA53_01009" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MADILIIALAALCTLLPFWIAARHGLLGWVSPLHLLGYFCGLGF LAKAVAYAAAPDLAFYARFDPAPGAALVGAIYLGGFVALICLGYLLACKPQPAAAQII AARAVAAGVQPMGALVGIALAVSVVTVLLILQVRGAAPGEAGVIAALNRVKQINVNAD GVGATLAGIKTLFVIPKYVFVLCLAQTILHPRPALLGMTLALGAALLGIALVSGDRFE LVELAIYALATHAVLGGRIGWRQGALGLAGATAIVMLSAYMTELRLGAQGASLLRQII GSTYFLDINVAVMVTGHLEPAQMLLGQSYGWWVFGWVPRDIWPDKPAIDLGVYFKREV MGITTGGAFNVTGPGEAFINFGWAGLAVAPALGWAFRVGEAFLLDAQRTARTGAAFLY PILFYPFVQACLQSSFSAFIVGAAAQLVLIVMIRTYFVRPLHWRAVPIERLSHA" gene 202869..203255 /locus_tag="SKA53_01014" CDS 202869..203255 /locus_tag="SKA53_01014" /note="COG0110 Acetyltransferase (isoleucine patch superfamily)" /codon_start=1 /transl_table=11 /product="acetyltransferase, putative" /db_xref="CDD:10532" /translation="MHNNVLRVLRLPAQIHRRAGLILATLWHRATLAQVGAGSRFQPG VRFDDPSSVIIGAGCYFWRGVAVSAEIGRAGLRIGDGVQINRGVHLDTTGGLVIGDDT LISEAAVIYTHDHGLHPWASGSACVR" gene 203225..203395 /locus_tag="SKA53_01019" CDS 203225..203395 /locus_tag="SKA53_01019" /note="COG0110 Acetyltransferase (isoleucine patch superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9985" /translation="MGVWIGLRAVILPQCRRIGDHAVIGAGAVVTRDVPAGAVVAGNP ARIIGQRAKVAA" gene 203392..204525 /locus_tag="SKA53_01024" CDS 203392..204525 /locus_tag="SKA53_01024" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="Glycosyl transferase, group 1" /db_xref="CDD:10312" /translation="MKVLHVTPSFYPATFWGGPIFSTKAICDGIAAAPDFSLRVLTTD AAGPAVRDRLRRVPLPYRVDYTRRIAGHSIAPGLLARLPAAMLWADVVHLTGTYSFPT LPVLGLARALRKPVVWSPRGALQATQDWPAAPRLRAKQAFEQAANLLRPAQTILHVTA PIEAAASRARLPDIQVTVIPNCVTIPPVTKRPYRPQGALRLMYLGRLHPKKGVDLLIA AMAALPVHVTLDIYGTGIPAHEAGLRAAAAGDPRIRFHGDVQASAKARAFGRADLCVL PSHSENFGITVAEALAHRVPVLTTTDTPWRRLAMMAAGACIDPACDDLAEAILRLGAG DLAAMGARGRDWMIRDFAPDAMVAGFASLYRSLATGEPQMVNA" gene 204522..205067 /locus_tag="SKA53_01029" CDS 204522..205067 /locus_tag="SKA53_01029" /note="COG0110 Acetyltransferase (isoleucine patch superfamily)" /codon_start=1 /transl_table=11 /product="putative acetyltransferase" /db_xref="CDD:9985" /translation="MTMQVNITANRRRRNWSGQAQAGRVLWGLCHPLFRFSPRPFWAW RVWLLRLFGARIGREVHIHPTVRITIPWHLHIEDQAAVGDNAILYALGPIHIGPRATV SQHAHLCAGSHDWRDPARPLLRPAIVIGPDAWVCTDAFVGPGVVIRAGAILGARGVAL RDLPARHIGQGNPMVTRPMDD" gene 205060..205962 /locus_tag="SKA53_01034" CDS 205060..205962 /locus_tag="SKA53_01034" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="spsA-like protein" /db_xref="CDD:10336" /translation="MTDLTVIILTRDEALHLPRALVSVQGIATRVVVVDSGSTDATVQ IARDAGADVWQHPWTNHAQQFNGALDRLETGTGWVLRLDADEYVTPDLAAQIAVGLPD VAGITVGRSMWFQGQPVRYGGLFPARMLRLFRHGQGRVEPRWMDEHIVVNGPVAHLSG GIIDDNRKPLDWWIAKHNAYASREVVDILNQRHGFLPADVAPSGAAGVKRWIKQHLYA RLPGGLRAGVYFLYRYILRGGFRDGAQARAFHVLQGFWYRYLVDAKLAEVERFMAQND AGPAAAIHAVLEIDLFAQTRSEAA" gene 205959..206708 /locus_tag="SKA53_01039" CDS 205959..206708 /locus_tag="SKA53_01039" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="Glycosyl transferase, family 2" /db_xref="CDD:10336" /translation="MKISVVTAVRNGAATLPRMLDSLRAQTHDELEHVIQDGGSTDGT LDVLRAQGLDGMALVSAPDGGIYQAINAGIRRATGDVIGVLHADDVLADASVLARVAQ ALADPGIDGVYGDLHYVARADASRVIRHWQAGPFDPRALARGWMPPHPTLYLRRAVFD RAGLYDTSYRISGDYDAMLRFLTTGQVRLAYIAHVMVRMQMGGASNRGFAQMIRKSRE DYRAIRAHNVGGIGTLVAKNLSKLPQFWGQF" gene complement(206733..207221) /locus_tag="SKA53_01044" CDS complement(206733..207221) /locus_tag="SKA53_01044" /note="COG3773 Cell wall hydrolyses involved in spore germination" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13093" /translation="MALACLALLAACGGPSGSSLRAPSADIDCMARAMYFESIRSSRD GMIAVGSVVMNRVEADAFPNTVCGVVRQKNQFAPGVMSKRMDSRSAPMARAAAQAVLA GERHPDIAQAMFFHAASYRASFNNIHYVLTTGGNAFYERRNPQNVTTPRPLPPREGIT GR" gene complement(207257..208528) /locus_tag="SKA53_01049" CDS complement(207257..208528) /locus_tag="SKA53_01049" /note="COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily" /codon_start=1 /transl_table=11 /product="mandelate racemase/muconate lactonizing enzyme family protein" /db_xref="CDD:14081" /translation="MDHDPPYPPPESHTMKLADLDIIITAPPAPGWGGRYWIIPKITT DTGVVGYGECYASSVGPEAMKAVITDVFARHMAGENPENIELMFRRVYSSGFTQRPDL TVIGAWSGLEMACWDILGKDRDRPVHALIGGRTNDRIRAYTYLYPRPTHPLPDFWSNP DMAAEVALDMVEQGYTAVKFDPAGPYTIRGGHMPSMHDLSLSVAFCKQIREAVGDRAD LLFGTHGQFSTGGAIRLGQAIAPYSPLWYEEPIPPDNVAEMAKVAGAVPIPIATGERL TTKAEFATVLRSGAATILQPALGRSGGIWETKKIAAMAEVYNAQVAPHLYAGPVEWAA NIQLAASIPNILMAETIETPFHMALIKSSLSVEGGYIPVPTAPGLGIDFDEDLARAHP YTGDGLHLQMQQDAIGYHGVNSFEGGAPVKA" gene complement(208549..209652) /locus_tag="SKA53_01054" CDS complement(208549..209652) /locus_tag="SKA53_01054" /note="COG1062 Zn-dependent alcohol dehydrogenases, class III" /codon_start=1 /transl_table=11 /product="oxidoreductase, zinc-binding dehydrogenase family" /db_xref="CDD:10787" /translation="MNPLTGPNMPQIKAAVCHAFGAPLTIETVTLAAPEHGEVEVTLK ACAICHSDVTYMEGGWGGTLPAVYGHEAAGHVTALGAGVRGIALGDPVVVTLIRSCGT CPSCASGRPVACESDMASGPLTMPDGSPLHQAMHTGGFAERVVVNQSQVVKLSDTIAM EAASLLACGVITGIGAVVNAAQLRAGQDVVVIGTGGVGLNAIQGARIAGARRIVAVDM TPEKLVIAQEFGATDTVLATSDKPWRAAKKAMGRGADAVFVTVGAIPAYDQAPHYLAN GGKVIMVGMPHSGAMSTYEPVMLAATGQGMVGSKMGDVVIARDIPWMVDLYEQGRLKL DELISGRWRLDQINEAITDTKSGSAKRNVIVFN" gene complement(209701..210960) /locus_tag="SKA53_01059" CDS complement(209701..210960) /locus_tag="SKA53_01059" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="tetracycline resistance protein" /db_xref="CDD:12168" /translation="MTLAKPSEPPNAGRMDKRLPVTFILISVMLDAMGIGLILPVMPA LIQEIEGTGLGQAAVWGGVLATIFAAMQFLFGPTLGSLSDRYGRRPVLIISLVIMALI YVLMALAQMIWLLLVGRIIGGITAATQATSAAYMADISRPEEKAANFGLIGAAFGMGF IFGPLIGGVLAEYGTRAPFWAAAVLAAANSVFGYYVLPETVTDRIRRPFDWRRANPLG ALRNIGALPGLKRLLLISFVYTIAFFVYPGVWAYFGAERFGWGPGMIGLSLAVFGVGI AVVQGLLIRPIIARIGERRAVILGLGVDVAAFVALGFVSNGWIALALTPLTALGSIAG PALQGIMSRTAADNQQGELQGTISSINAVATIIAPLLVTQTFWFFTAPDAPVYLPGAP FLLSALLTVSCIAVFMQTPRPKRARGT" gene complement(210961..211665) /locus_tag="SKA53_01064" CDS complement(210961..211665) /locus_tag="SKA53_01064" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="esterase EstC, putative" /db_xref="CDD:23022" /translation="MSDFLLIHGSCHGAWCWDDLIPHLTAHGHTARAIDLPSHGQDST AAHKVTLDLYASAIVAAIDTPVILVGHSMAGYPITAAAGLAPDRISALVYLCAYVPMA GKSLADMRRMAPSQPLLDAIIVDDARVTFSVDRAKAAEKFYHDVPPARAAWAIGQLGP QPILPQETPLEPRHTLPRHYLRCTDDRTIPPAFQSTMTADWPAGTVSDLPTSHSPFLS DPALLAQHLDRIARAL" gene complement(211668..212453) /locus_tag="SKA53_01069" CDS complement(211668..212453) /locus_tag="SKA53_01069" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="3-oxoadipate enol-lactone hydrolase" /db_xref="CDD:10466" /translation="MQVIRDGVALDYDVTGPDDGPPVVFANALGTTRAIWDQVLAGLP AGLRIIRYDMRGHGASDVPDGPYSMGQLVSDAEVVCDAAGVRDAMFVGLSVGGMVAQG LAVKRPDLIRALVLSNTAAKIGNPKLWQDRIDTVRTKGLPALSDTVLQRWFARGFYGT PAMQPWRAMLESTPVAGYTGTCAAIAGTDFYTPTAGLRIPTLGIAGIDDGSTPPDLVR ETIDLVPGSQFVLMRRVGHLACVEDPQTYAAHLADFMKAVGHV" gene complement(212453..213415) /locus_tag="SKA53_01074" CDS complement(212453..213415) /locus_tag="SKA53_01074" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="Threonine dehydratase" /db_xref="CDD:10889" /translation="MNIEMIRAAAQRLAGHARRTPILTSPFLDAIAGRRVFVKAECLQ HTGSFKFRGGWSAVSALPAEALQKGVIAFSSGNHAQGVALAARSHGAPAVIIMPADAP AVKIANTRALGAEVVLYDRTTEDRDAIGDRLAAARGLTLIKPYDEPQVIAGQGSCGLE IAAEMTALGVTRADVMVCCGGGGLTSGIALALAADAPGLRTRPVEPEGFDDATRSLAS GRIERNARLSGSLCDAIITPQPGNLTFPIMQQHCGPGVVVSEDQALQAMALAFDRLKI VLEPGGAVALAAALFHPDASEGDAVIAVATGGNVDPAIFAKALA" gene complement(213412..214230) /locus_tag="SKA53_01079" CDS complement(213412..214230) /locus_tag="SKA53_01079" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="predicted hydrolases or acyltransferases" /db_xref="CDD:10466" /translation="MPRFTTPDGLSLHYTDTGNGLPVMALAGLTRNGADFDHVAPHLP VRLIRPDYRGRGQSDWADPATYTIAHEAADVLALMDHLGLDRAAVLGTSRGGLIAMLL AATAKDRLIGVALNDIGPEIAPAGLAVIKEYIGRNPPQKTYAAAAEARATLWTDFAQV PMDRWLAEVRAHYAQTPDGLVVRYDPRLRDAVLAAGAQPVPDLWPLFDAFQDLPLALI RGANSDLLTVQTANEMARRRPDMIRTDVPGRGHIPFLDEPQALSALHAWLEEMQ" gene complement(214230..214907) /locus_tag="SKA53_01084" CDS complement(214230..214907) /locus_tag="SKA53_01084" /note="COG1011 Predicted hydrolase (HAD superfamily)" /codon_start=1 /transl_table=11 /product="haloacid dehalogenase, type II" /db_xref="CDD:10740" /translation="MPITTCVFDAYGTLFDVNAAAAQAADDPDFPRLADLWPAVARDW RRKQLEYTWLRAVADRHCDFWQVTQDGLDWALAAQGLDDPALRARLLALYRQLPTYAE VPAMLAALKARGLTTAILSNGSPDMLNAAVASAGIAPQLDAILSVETVGVFKPHARVY DLVGAQFGCAKDEVLFVSSNGWDAAGAAGYGFRTIWVNRAGDPPDRLYADPHHTLGNL VSIPDLL" gene 215037..215471 /locus_tag="SKA53_01089" CDS 215037..215471 /locus_tag="SKA53_01089" /note="COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase, FKBP-type" /db_xref="CDD:10773" /translation="MTQAKAGDKVQIHYTGTLQDGVTFDSSAGRDPLEFVIGSGQIIP GLDAAIPGMSVGEKKTVQIPCEEAYGAHNPEALQAVPRDNIPADIPLDPGTQLQMQTP QGQVVPVTVADVTETEVTLDANHPLAGKDLTFAVEVVAIKAA" gene <215615..215851 /locus_tag="SKA53_01096" CDS <215615..215851 /locus_tag="SKA53_01096" /note="COG0517 FOG: CBS domain" /codon_start=1 /transl_table=11 /product="arabinose 5-phosphate isomerase" /db_xref="CDD:12254" /translation="GIVTDGDLRRHMQGLLDHTAGEVMSANPTTVSPHALAEEAVNIM NSRKITCLFALDPANPGKVTGILHIHDCLRAGIV" gene complement(216029..216820) /locus_tag="SKA53_01101" CDS complement(216029..216820) /locus_tag="SKA53_01101" /note="COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)" /codon_start=1 /transl_table=11 /product="enoyl-(acyl-carrier protein) reductase (NADH)" /db_xref="CDD:10493" /translation="MTITLQGKRGLIMGVANERSIAWGIAKAMADAGAELAFSYQGEA FGKRLEPLAQSVGSSMMVDVDVTDEASMDAAFAMIKDTWGTLDFVVHAIAFSDKNELA GRIIDTSRENFKNSLTISCYSFIDVAKRASALMPNGGTLLTLTYQGSNRVTPFYNVMG VAKAALESATRYLANDLGPQGIRVNAISPGPMKTLAGAAIGGARKTYKHTEQNTPLRA NATLEAVGGTAVYLASDAGACTTGEIIRVDGGFHVLGMPQPDHLV" gene complement(216825..218054) /locus_tag="SKA53_01106" CDS complement(216825..218054) /locus_tag="SKA53_01106" /note="COG0304 3-oxoacyl-(acyl-carrier-protein) synthase" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) synthase" /db_xref="CDD:10178" /translation="MRRVVITGLGIVSPIGNNTTEVTAALKAGTSGIVASAEMAEHGF RSRVAGTLKIDVADHVDKRTLRFMGPGAAYAHIAMGQAIADAGLTQDQIVNPMTGLIA GSGGPSTSAMFAAHNVVTETGATKRIGPFAVPKCMSSTISANLATAHQIKGMNFSITS ACSTSLHCIGMAAQQVALGTQDIMFAGGGEELDWTLSCLFDAMGAMSSKYNDTPERAS RAFDAGRDGFVIAGGGAIVVLESLEGALARGAKIYAEVTGFAATSDGADMVAPSGEGG ERAMRGALRTLPAGRKISYINAHGTSTPVGDVGEVEAVRRVFGRGSTPPISSTKSMTG HSQGATGAQEAIYCLLMLQDDFIAPSINVETLDPALDPAEIAMVRVDNAGLDTVMTNS FGFGGTNGSMLLSKYQG" gene complement(218219..218980) /locus_tag="SKA53_01111" CDS complement(218219..218980) /locus_tag="SKA53_01111" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDAVNRFFNSIENAAYQSQTSLIELFVYFLTVELGQDAASAKD VDQCFTACDLTPPRATASRLSEGLKTKPQKFVKSGSGYKLQRHMRDQLSRKLGVETTT SKTSATLRSLSQEMPAGNAKEFLAETLDCFEVGANRATIVMAWVLTVNHLIDYILVHK LFEFNAVLAKNTDKRVKVSTITVRDDFNDIPEGKFIEFCRSANIISNDVRKILEQKLG TRNSCAHPSGVKILRSKVVDFVEDLVENVVLKYVI" gene complement(218977..219558) /locus_tag="SKA53_01116" CDS complement(218977..219558) /locus_tag="SKA53_01116" /EC_number="4.2.1.60" /codon_start=1 /transl_table=11 /product="3-hydroxydecanoyl-ACP dehydratase" /translation="MQTKLHINLTQGIVDVEGDVEFVKAVYHDFKDRLTQHSRTAPEA RELVDAPSSKTASAGSAKSKRRGQSRKKAAISEAGETSVNPDAPKLDKTVDTSKLKAF YDQFEPNSAPEKILIFLKYLIDIENIPAPSTDQIYTCFRAIKEKVPSAYSQAFRDTAS KKGFIDYNSATDIKITIMGENHFEHSLKKKAAE" gene complement(219752..220261) /locus_tag="SKA53_01121" CDS complement(219752..220261) /locus_tag="SKA53_01121" /note="COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases" /codon_start=1 /transl_table=11 /product="beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA" /db_xref="CDD:10632" /translation="MADFPTSFDKEALLQCARGELFGPGNAQLPAPPMLMMDRITEIS GDGGLHGKGHVVAEFDITPDLWFFDCHFPGNPIMPGCLGLDGLWQLTGFNLGWRGWQG RGYALGVGEVKLTGMVRPDRKMLTYKVDFTKALQTRRLTMGVANGIVEADGEVIYQVT DMKVALSES" gene 220409..220825 /locus_tag="SKA53_01126" CDS 220409..220825 /locus_tag="SKA53_01126" /note="COG0735 Fe2+/Zn2+ uptake regulation proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, Fur family" /db_xref="CDD:10603" /translation="MKDMDNHRGTDWLAGAGLRPTRQRLTLADLLVGDGQNRHVTAES LFDAASAAGEKVSLATVYNTLRAFCEAGLMREITVDGSKSYFDTNMTDHPHFYWEDTA SLTDAPADQLEIRRLPHAPAGAEIASVDVVIRLRRK" gene 220939..221097 /locus_tag="SKA53_01131" CDS 220939..221097 /locus_tag="SKA53_01131" /note="COG1943 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQDQRSDLLTARIGLLRDAVRLCRKQSPFRIDAAVILPADDHIC LSTASACA" gene 221090..221356 /locus_tag="SKA53_01136" CDS 221090..221356 /locus_tag="SKA53_01136" /note="COG1943 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11651" /translation="MPDNLTAVHKRRGEKGIWQRRFWEHVIEDEGDFALHLHLITTAP VRAGLVRRATDWPYASWPHVKGATLKTIARVPSSPDRAVAAPAM" gene complement(221295..222206) /locus_tag="SKA53_01141" CDS complement(221295..222206) /locus_tag="SKA53_01141" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRRDLSQFARVFHGYPPHMHYTSLSALTADKTRALSKGPICLIL IEDQVAVEQTIRHHAAIGFSTLIAFCDPAIALPADIALHRVDHDVTQPEALPQIINTV SAAARGAWIYHCYNAEFLFFPFSADRTLREMLTFVTEERRHSVMTHVIDLYARDLTTH PDAVDLEEAWFDSAGYFAIPRRDAAGAVLDRQVDICGGLRWRFQDHVPPASRRLDRAA LFRAAKGVVLGPDHRLSDPEYNTYACPWHHSVTAAICSFRAAKALRRNPGSRDAIATF HWSKSVRFTWQAQQLLDLGMMEPGQWF" gene 222264..223574 /locus_tag="SKA53_01146" CDS 222264..223574 /locus_tag="SKA53_01146" /note="COG0621 2-methylthioadenine synthetase" /codon_start=1 /transl_table=11 /product="tRNA-i(6)A37 thiotransferase enzyme MiaB" /db_xref="CDD:10491" /translation="MTAPKKLFIKTYGCQMNVYDSERMAEALGGQGYVQTDHAEDADM ILLNTCHIREKAAEKVYSELGRMKVLKDAKPDLKIGVAGCVAQAEGAEIMRRQPMVDL VVGPQSYHRLPAMDAAVQGGAKALDTDFPEDDKFKTLKTRSKAKRGPTAFLTVQEGCD KFCAFCVVPYTRGAEVSRPADRILREARELVDAGVRELTLLGQNVNAYHGHERGLAGL IWALTEIDGLERIRFTTSHPNDMDQALIDAHGTCEKLMPYLHLPVQSGSDRILKAMNR KHTAESYLRLIDRIRAARPDILLSGDFIVGFPGETDQDFEDTLQLVRDVHYGQAYSFK YSTRPGTPAAEKPQLPDDVMNERLQRLQALLRDQQQQTQASMIGREVKVLFEKAGREA GQMIGKSEYLHAVYADAPATVLGQVRRVRIVQDSANSLKGELIG" gene 223698..224702 /locus_tag="SKA53_01151" CDS 223698..224702 /locus_tag="SKA53_01151" /note="COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase" /codon_start=1 /transl_table=11 /product="PhoH family protein" /db_xref="CDD:11413" /translation="MATGALTPPADDITESVLEFPDNFLLIDLCGEYDRNLTTIEDKL SVQILRRGNLLAVIGEQGPRHDALEVLKSLYQRLEQGRSLEAGDIDRELRMGPAGAPG PVDQIELFKGEIARVEVKTRKKLVEPRTEAQKAYVKALFDHEMAFGIGPAGTGKTYLA VAVGVNMLINGHVDKIILSRPAVEAGEKLGYLPGDMKDKVDPYMQPLYDALNDFLPGK QAAKMMEEKVIEIAPLAFMRGRTLSNAFVVLDEAQNATTMQMKMFLTRLGQGSRMVIT GDRTQIDLPRGVNSGLWDAERLLKHIPKISFNYFTSKDVVRHPLVAAIIEAYEADDPK " gene 224699..225193 /locus_tag="SKA53_01156" CDS 224699..225193 /locus_tag="SKA53_01156" /note="COG0319 Predicted metal-dependent hydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10193" /translation="MSVDVVVEDLRWAAVDIDALAQQASDAVFDRLGLEPSVFEIAVL ACDDARIAALNADFRGKPAPTNVLSWPSDERAPAVAGEMPLPPDPVMDTELGDIAIAY DTCLREAEAAGSQFIHHCLHLLVHGTLHLLGFDHERDLDATLMEGLEVEILGKMGVDN PYRD" gene 225190..226113 /locus_tag="SKA53_01161" CDS 225190..226113 /locus_tag="SKA53_01161" /note="COG1253 Hemolysins and related proteins containing CBS domains" /codon_start=1 /transl_table=11 /product="hemolysin, putative" /db_xref="CDD:10970" /translation="MNGANRPTDKDTMGDQGDGSSSAAQSAQQNHKDERPGLLARFGL GFKPKVMNGETGEIAQGVSTPEPTVLGMLNLRRKRVEDVAVPKTDIVAVPLTITKDDL VNTFRDSGMTRLPVYDTTLDTPVGIANLKDFALRYGFNGGTADLDLRDMLRPLLFVPP SMPLGVLLQKMQAERIHMALVIDEYGGTDGLLTIEDLIEQVVGEIEDEHDIAEAKSWI MEKPGVYLAQARTDLEDFEAEIGMNLTDHDDIDEEEIDTLGGLVTMLSGHLPARGEVI QHPDGPEFEVVDADPRRIKRLRVRLNTTRDA" gene 226106..227587 /locus_tag="SKA53_01166" CDS 226106..227587 /locus_tag="SKA53_01166" /note="COG0815 Apolipoprotein N-acyltransferase" /codon_start=1 /transl_table=11 /product="apolipoprotein N-acyltransferase" /db_xref="CDD:10682" /translation="MLDNLPRWARFGVLFALGVGAALGQAPLDLWPAAIAALALLLVL HRDVASPRIAAGRVWFFGLGYFAFALRWIVEPFLVDAARHGWMAPFALIFMACGAALF WAVAGWIASRIAPRSQLMLALLLVAAEMTRSLVLTGFPWALLGHIWVPTWMAQASAIG GPHLLTGVTLVAALAVARIARPAWRSGAAALLALLLVAILLRPGAAPQIAVDAPMVRL VQPNAPQHQKWDAVYRDQFVNRLLELSGQGDRPDLIVWPETAVPYLLNEVIDDLRPLD EAARGAPLVFGVQRVDDAGRFYNALVVMAQGGRITATYDKQHLVPFGEYIPFGDLLGR FGIRGLAVADGGGFAAGTLPGPIAIPGIGLAVPLICYEGIFAEEIVAGPDRPRLLLLI TNDGWFGQAAGPHQHLAQARLRAIEQGLPMVRVGNTGISAMIDAQGRITAALPLGVDG ALDAPLPAVRAAPVYTALGDWPVGLLLLLGIAICAINRKRDSD" gene 227677..228858 /locus_tag="SKA53_01171" CDS 227677..228858 /locus_tag="SKA53_01171" /EC_number="2.5.1.6" /note="COG0192 S-adenosylmethionine synthetase" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine synthetase" /db_xref="CDD:10067" /translation="MARQDYIFTSESVSEGHPDKVCDRISDAVLDAFLAEEPQARVAC ETFATTNRVVIGGEVGLTDKSRLTEFMGRIEGIARDAIKDIGYEQDAFHHATCEITNL LHGQSAHIAQGVDAAEGKDEGAGDQGIMFGYATTETDALMPAPIQYAHAILRRLAEVR KSGQEPTLRPDAKSQVSVRYEGGKPVEVTSIVLSTQHQFESQTSADIRAIVEPYIREV LPAGFITEATKWWVNPTGTFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPT KVDRSAAYAARYLAKNVVAAGMADRCTIQLSYAIGVAQPLSIYADTHGTGEVDPVAIE RAVAQVMDLTPRGIREHLQLNRPIYARTSAYGHFGRAPDADGGFSWEKTDLVEALRRA V" gene 228928..229641 /locus_tag="SKA53_01176" CDS 228928..229641 /locus_tag="SKA53_01176" /EC_number="2.1.1.33" /note="COG0220 Predicted S-adenosylmethionine-dependent methyltransferase" /codon_start=1 /transl_table=11 /product="tRNA (guanine-N(7)-)-methyltransferase" /db_xref="CDD:10095" /translation="MTKTQHPSGAPWRNFYGRFRGKTIRASQHDYLENDLDPLSPGPV SWDANPDRLALDLGALFAGKDVWLEIGFGGGEHLVHMAQSYPGIGIIGAEPFINGVAM LLGKIRKAGVDNLAVHPGDVRDLFDVLPAQSISRVFLNYPDPWPKKRHHRRRFVTPEH LAPLHRVMKPGAVLRVATDIPDYVRQTLEEVPCQGFDWLAETPADWRKPWADWISTRY EQKALREGRVPHYLTFVRV" gene 229682..231103 /locus_tag="SKA53_01181" CDS 229682..231103 /locus_tag="SKA53_01181" /note="COG0128 5-enolpyruvylshikimate-3-phosphate synthase" /codon_start=1 /transl_table=11 /product="3-phosphoshikimate 1-carboxyvinyltransferase" /db_xref="CDD:28219" /translation="MGARDGPFARTAVSGGANTKEPFMSSHATPIPMMSSACGPLQGQ AHVPGDKSISHRSLILGAMCIGETRITGLLEGDDVLDTAKAMRAFGAEVTDHGGGQWS VRGVGVGGFAEPDHVIDCGNSGTGVRLIMGAMATTPITVTFTGDASLNGRPMGRVTDP LALFGTRAVGRAGGRLPMTLVGAAGPVPVRYVVPVPSAQVKSAVLLAGLNAPGQTVVI EKEATRDHTERMLQGFGATLTVEDTDEGRVITLTGQPELQPQDIVVPRDPSSAAFPVC AALIVPGSDVLVPNIGLNPTRAGLFTTLQEMGADLTFENLRSEGGEPVADLRARFSPD LRGITVPADRAASMIDEYPVLSVVAAFAQGVTDMPGVKELRVKESDRIDAMAQGLRAA GVTVDEGPDWWRVTGVGHGHVPGGVTVQSRLDHRIAMAFLVMGMAAQNPVIVDDAAPI TTSFPIFEPLMNDLGAQIARISA" gene 231100..231720 /locus_tag="SKA53_01186" CDS 231100..231720 /locus_tag="SKA53_01186" /note="COG0283 Cytidylate kinase" /codon_start=1 /transl_table=11 /product="cytidylate kinase" /db_xref="CDD:10157" /translation="MSFTVAIDGPAAAGKGTISKAVAVHFGFAHLDTGLLYRAVGAKV LAGADPVAAARALDPADLDGDALRTAEVAQAASRVATDPAVRDALTAFQRGFAARPGG AVLDGRDIGTVICPGAQVKLFVTASAACRAERRWKELQAQGSDMTLETVLADVQARDA RDAGRATAPLAAAADAVLIDTSDMSIADAVARTIAVIAAAQKSLQG" gene 231923..233581 /locus_tag="SKA53_01191" CDS 231923..233581 /locus_tag="SKA53_01191" /note="COG0539 Ribosomal protein S1" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S1" /db_xref="CDD:10410" /translation="MDEFEALLNESFEMDTPAEGSVVKGKVIAIEAGQAIIDVGYKME GRIDLKEFANPGEAPDIKVGDTVEVFLRQVENARGEAVISREMARREEAWDRLEKAYA DEERVDGAIFGRVKGGFTVDLGGAVAFLPGSQVDVRPVRDAGPLMNMKQPFQILKMDR RRGNIVVSRRAILEESRAEQRAEVIGNLTEGQEVDGVVKNITEYGAFVDLGGVDGLLH VTDMAWRRVNHPSEILAIGETIKVQVIKINKETHRISLGMKQLQEDPWDAVEAKFSLG SVHQGRVTNITDYGAFVELEAGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVMVLEI DSAKRRVSLGLKQTQRNPWEVFAETHPEGTEVEGEVKNITEFGLFIGLEGDIDGMVHL SDLTWDGRGEDVIGDFRKGDMVKAKVAEVDVEKERISLSIKALDSDPFADAIGGVKRG SIITVEVTKIEDGGIEVEYEGMKSFIRRSDLSRDRAEQRPERFGAGDKVDVRVTNIDS KTRKLGLSIKAREIAEEKEAVEQFGSSDSGASLGDILGAALKRD" gene 233855..234136 /locus_tag="SKA53_01196" CDS 233855..234136 /locus_tag="SKA53_01196" /note="COG0776 Bacterial nucleoid DNA-binding protein" /codon_start=1 /transl_table=11 /product="integration host factor beta subunit" /db_xref="CDD:25448" /translation="MIRSELIQKIADENPHLYQRDVEKIVNTIFDRITDAMAQGNRVE LRGFGAFSVKKRDPRLGRNPRTGEAVEVDEKHVPFFKTGKLLRDRLNGL" gene 234146..234502 /locus_tag="SKA53_01201" CDS 234146..234502 /locus_tag="SKA53_01201" /note="COG1455 Phosphotransferase system cellobiose-specific component IIC" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKTIRYAFWAIVALCLILIGLANRDPVTVRAMPVWLSDLLGLSP DVTLPLFVVIFIGVGAGLAIGFLWEWLREYRIRADGRAKSREVAALRQELQQMRIASV GAKSEDDVLALLEKTR" gene 234502..235143 /locus_tag="SKA53_01206" CDS 234502..235143 /locus_tag="SKA53_01206" /EC_number="5.3.1.24" /note="COG0135 Phosphoribosylanthranilate isomerase" /codon_start=1 /transl_table=11 /product="N-(5'-phosphoribosyl)anthranilate isomerase" /db_xref="CDD:10010" /translation="MSLPTRVKICGLRDAAMLDAAVQAGAAYVGLVFFEKSPRNVTLA QAAALAAMVPAGVAKVALVVNADDAELDALLAQVPVDILQLHGSESLARVTALKARYG LPVMKAVGVAGPDDLAALDAYAQVADLLLVDAKPPKGADLPGGNGLSFDWRLIAGRRW PVPWMLAGGLTPANVAQAVALTGAGQVDVSSGVESAPGVKDAALIAAFCAALR" gene 235204..236430 /locus_tag="SKA53_01211" CDS 235204..236430 /locus_tag="SKA53_01211" /EC_number="4.2.1.20" /note="COG0133 Tryptophan synthase beta chain" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit beta" /db_xref="CDD:10008" /translation="MANDLFNSFMTGPDENGRFGQFGGRFVSETLMPLILELEEQYEH AKTDPTFWAEMHDLWTHYVGRPSPLYHAERLTAHLGGAKIYMKRDELNHTGAHKINNV LGQIILARRMGKSRIIAETGAGQHGVATATVCAKFGLKCVVYMGAHDVERQAPNVFRM KLLGAEVVPVTSGRGTLKDAMNDALRDWVTNVRDTFYCIGTVAGPHPYPAMVRDFQAI IGQETKAQMQEAEGRLPDTLIAAIGGGSNAMGLFYPFLDDKDVNIIGVEAGGKGVNDK MEHCASLTGGRPGVLHGNRTYLLQDDVGQILEGFSISAGLDYPGIGPEHAWLHDIGRA KYVSITDVEALEAFQLSCALEGIIPALEPSHALAHVMKIAPDLPKDHLLVMNMCGRGD KDIFTVAKHLGFDMKA" gene 236592..237044 /locus_tag="SKA53_01216" CDS 236592..237044 /locus_tag="SKA53_01216" /note="COG3212 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKKFLLSTTAAIALASNALYAQSITDQIVSQLQAQGYESIEIEN GQTQIKVEAILNGRKLEVVYDALTGVILKEEASTADDDDTLRRGVRISSSDDDDFLDD DEDDNDDDDNDDDEDEDDNDDDDDDTDSDRDDDDDNDEDDNDDDDNDD" gene 237092..237568 /locus_tag="SKA53_01221" CDS 237092..237568 /locus_tag="SKA53_01221" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMIKQLMICFLLIGSPQIVAAQSVQDQIIAQLQQQGFTQIEVSR TWLGRVRIVSLRDDLQRELVFNPQTGEILRDFWQTINGDGLASPRIVDPFRDSGSGGG QSSGGGSSEGGGSSGGDSGSGGDDDDDDDGDDDDGDDDGDDDDGDDDDGDESDDDD" gene 237676..238092 /locus_tag="SKA53_01226" CDS 237676..238092 /locus_tag="SKA53_01226" /note="COG2771 DNA-binding HTH domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LuxR family" /db_xref="CDD:25324" /translation="MQIAGSVLGFSPVGWRLYELIEIGAAVGLLLGIVSGILVLRTTM ARNLRVEDQLRIASGAFMEVMNERFNGWGLTPAERDVALFAIKGMSTQEIAGLRGVSE GTIKAQTNAIYRKAGISGRAQLLSLFIEDMVADLPE" gene complement(238105..238488) /locus_tag="SKA53_01231" CDS complement(238105..238488) /locus_tag="SKA53_01231" /note="COG3651 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12974" /translation="MEKDPSFNVLGSTLATCSTAPMTGFFRNGTCDTCAADNGSHTVC AVMTAEFLAFSKYVGNDLSTPRPEFGFPGLKAGDGWCLCAGRFLQAHEEGCAPQVNLH ATHVRALDIVPIDVLRQYALPGDLG" gene complement(238493..239536) /locus_tag="SKA53_01236" CDS complement(238493..239536) /locus_tag="SKA53_01236" /note="COG4427 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13647" /translation="MTAIRAAFTAQAAACASLGSPFMAQLMRLCATQDWPAGAVSTRI HDWTGDLGPSGQSVPLRLAGALHALHLQGHARLAPVYPPQASDDATLWAAVADVLVSE QAAILRWLDSPPQTNEVRRSAVLIALGHWLADRFALPLRCSELGASAGLNLQWDDYAL ALGRQVFGPATPALTLSPDWTGALPPNTRPQVTARSGVDLTPLDPHAPNDALRLRAYL WPDQPDRQMLTQAAITTARTIVAKGDAIDWLPGQLDHHAGQTHLIYTTIAWQYFPTAV QDRGAAMIRAAGQSARDDAPLAWFGMEPDGTGPGAALTLRLWPGDLTFALGRADFHGR WVQWTPVQIDKKD" gene complement(239539..240204) /locus_tag="SKA53_01241" CDS complement(239539..240204) /locus_tag="SKA53_01241" /EC_number="3.1.1.29" /note="COG0193 Peptidyl-tRNA hydrolase" /codon_start=1 /transl_table=11 /product="peptidyl-tRNA hydrolase" /db_xref="CDD:25707" /translation="MKLLIGLGNPGAKYAQNRHNIGFMAMDRIAGDHGFSPWRAKFQG QISEGRIGPDKVALLKPETFMNLSGQSVGEAMRYLKLTPADLIVFHDEIDLAPGKVRL KTGGGHAGHNGLRSIHAHIGPDYDRVRLGVGHPGHKDAVPGYVLHDFAKADLDWLDDE MRGISDGIAHLVTGDGARFLNAIALRTAPPRSSTSTPKPEKPPAAEPDNRTAMARLMD KFR" gene complement(240300..240914) /locus_tag="SKA53_01246" CDS complement(240300..240914) /locus_tag="SKA53_01246" /note="COG1825 Ribosomal protein L25 (general stress protein Ctc)" /codon_start=1 /transl_table=11 /product="Ribosomal protein L25" /db_xref="CDD:11535" /translation="MAGQIPDLNAKVRAGTGKGAARQARRDGEVPGIVYGGGIDPQSI NIPFNYLLTTLRKGRFMSTLFNLKVEGQDDVRVVCRGVQRDVVKDLPIHIDLMRLKRT SRVNLFIPVEFINGDTCPGIKKGGVLTVVRNEVEMDVLAGDIPDHLTVDLANAQMGDV IHISDVTLPEGAKPVIDRNFVIANISAPRGLLASADEDEATDAA" gene 241148..242320 /locus_tag="SKA53_01251" CDS 241148..242320 /locus_tag="SKA53_01251" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="Major facilitator superfamily (MFS) transporter" /translation="MSIRSALILSRRPAVAFVVVGIFWGCFAAHVPVIKAQLGASDAL FGTLLLGSATGLVSAMWLAPKLDRWLGAQSMQAAIAALAFAWLLPSLITHPLIFAASM ALVGLASGLLDVVMNARVSELEATHKRPLMNANHAMFSVAYACSALIAGVTREAGMPP APVFAGFAVFALCLIPFVRMDVTYVSAEEGYAGRYPLWPILLCGGIVLIAFMSEATVE AWSALHVERTLGGGAAEGALGPAMLGLTMAFGRFSGQAVAERLREVHVLIGASILSAS GAVIAALAPTPVWAYVGFGILGLGVSVIGPMGLALVGKLVPPHLRTEAISRAAVIGFS GFFFAPTLMGLMSQAFGLRVAFLVVALLLLATLPLALLVARQKAHVPQEAIAPNQG" gene complement(242459..242659) /locus_tag="SKA53_01256" CDS complement(242459..242659) /locus_tag="SKA53_01256" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRMTNVLATAAAVAALSTTAFAGGMSPEVMEAPVAVVEAAPAGS SANSTLIIVGVLAALLIAAAAD" gene complement(242828..243991) /locus_tag="SKA53_01261" CDS complement(242828..243991) /locus_tag="SKA53_01261" /note="COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases" /codon_start=1 /transl_table=11 /product="L-lactate dehydrogenase, putative" /db_xref="CDD:7893" /translation="MPVITTIADLKRLHKRRTPKMFYDYAESGSWTEQTFRENTSDFD LIRLRQRIAVDMTNRTTQSQMIGQDVAMPVALAPVGLTGMQSADGEIKAAKAAEKFGV PFTLSTMSICSIEDVAENTTKPFWFQVYTLKDDDFMQRLFDRARAAGCSAIVITLDLQ ILGQRHKDLKNGLSAPPKFTLASMADLATKWGWGIEMLQTKRRFFGNIVGHAKGVSDP SSLSSWTAEAFDHALDWDRVAQLMKMWGGKVILKGILDADDARKAAALGADAIIVSNH GGRQLDGAVSSIRALPAILDAVGDKVEVHFDSGIRSGQDVLKALALGAKGTYIGRAYI NGLGAMGEAGVTRALEVIHKELDTTMALCGRRDIRTVDRDILLVPKDFEGSWQ" gene complement(244049..244840) /gene="trpA" /locus_tag="SKA53_01266" CDS complement(244049..244840) /gene="trpA" /locus_tag="SKA53_01266" /EC_number="4.2.1.20" /note="COG0159 Tryptophan synthase alpha chain" /codon_start=1 /transl_table=11 /product="tryptophan synthase subunit alpha" /db_xref="CDD:10034" /translation="MSRIDAKFAQLRTEGRKAFVAYVMAGDPDYATGLEIVKGLPAAG VDIIELGMPFTDPMADGNTIQLAGQRALAAGQTLEKTLDYARALRETDNTTPIVMMGY YNPIYSRGVDAFLADAVAAGIDGLIIVDLPPEEDDELCIPAQKAGINFIRLATPTTDD KRLPKVLENTSGFVYYVSMTGITGTAAVQTTEVAPEVARIKAKTDLPVIVGFGIKTPQ AARAVAAVADGAVVGSAIVDRIARGDSVAEVLAFVAELAQGTHAA" gene 244969..246066 /locus_tag="SKA53_01271" CDS 244969..246066 /locus_tag="SKA53_01271" /note="COG0012 Predicted GTPase, probable translation factor" /codon_start=1 /transl_table=11 /product="GTP-binding protein YchF" /db_xref="CDD:9888" /translation="MGFKMGIVGLPNVGKSTLFNALTKTAAAQAANFPFCTIEPNVGD VAVPDARLDKLAAIAGSKQIIPTRMTFVDIAGLVKGASKGEGLGNQFLANIRECDAIA HVLRCFEDDDITHVEGRVDPVEDAATIETELMLADLESIEKRLANLMRKVKGGDKDAV QQVRLLEAAQAALEQGKPARTVAVDADDAKAWRLLQLLTIKPVLYVCNVEENSAGSGN SQSARVAEMAAAEGNSSVVISARIEEEISQLDAEEATMFLDEMGLEEPGLDRLIRAGY ALLHLQTYFTVGPKEARAWTIKAGTSAPQAAGVIHGDFERGFIRAETIAYDDFVGLGG EQPAKEAGKMRAEGKTYTVKDGDVLHFLFNT" gene complement(246071..247198) /locus_tag="SKA53_01276" CDS complement(246071..247198) /locus_tag="SKA53_01276" /note="COG3754 Lipopolysaccharide biosynthesis protein" /codon_start=1 /transl_table=11 /product="possible glycosyltransferase" /db_xref="CDD:16340" /translation="MKQIEGWKVGRELLRLRRQLVTLPQTLIGYLDLLFAPARRRQHQ ANFASRVQMHDGACPAGKQIAIYLVYQPQGLAPSSLALCRDLVDNGFAPFVVLNAPLS DADLSALQAHTWKIMQRPNFGYDFGGYQDALLTLRNLVPDANAAIIMNDSIWLNMDQA LIAMLQSAPTAVVGLVQESKLRTDHKNNLTVDLQNLQSYFYFIQKGFWQDPQFWRFWQ DYMMVSSKKRTITAGELGFTRHLVANDIPHQALISKMQFLDQIKTKNSKYLGFVLRYA VYTNPHLAAERDALMAWHDPSNTWQKAAQAHIRQTLIQEPLNGSFWVAACDMFGITVI KKNKDALPEQMRKAFLAAHQDGAIALSPDIAAEIAASLRRD" gene 247359..248333 /locus_tag="SKA53_01281" CDS 247359..248333 /locus_tag="SKA53_01281" /note="COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases" /codon_start=1 /transl_table=11 /product="Hypothetical protein of glycosyl transferase family" /db_xref="CDD:25768" /translation="MTIEIKAENRPQKFRQSVIFCADQSYLPFASLAIHTLLRNNPVR DYDICIASVDALVPPTELKDHDIRFCQIDVGNAFDGMPVSKRFSLAAYLRIALPEAFA GQYDRIFYLDADVFVVGDAIDAVFRLDMLSCPVGAVTDITKLKHPNKPTFDQKALGVD GPYFNSGVMLFDVERFITMRVRERCAEAAKFYQGEPIYFDQTLLNIVLQKEWAQLNLG WNWQWPFSRSLFECFIDVQIVHFIGDDKPWSDHKRRLPLKYRETARRFFQKFYPELAQ KIPAADAALRNGALYHYFFRHITKIHLFTKCFNRHCGDLSKVLPPDLR" gene complement(248330..249100) /locus_tag="SKA53_01286" CDS complement(248330..249100) /locus_tag="SKA53_01286" /note="COG3306 Glycosyltransferase involved in LPS biosynthesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25814" /translation="MAELTRADLGIWLINLDRDTSRLARMQQQLDAMGLDYTRFGAID GRARADELAPRVNAAAYARNMGQAVSPGHIGCYASHVAVWDQVAQATQPVALILEDDV VFHDDFLDSLDAALAGAAAWDTLRFNCIRAKWPVCQGYLGRYRLNAYIGPFTGNATYL VKRDVAGRLAPAFWPQTRAHDHEMNRFFHHDFRQFGLEPFSSHVDDGGVSTITGTGFD QVRKFAWYRRLPHYRLKAGNYLRRAWWLARNGCLWRRA" gene complement(249093..250124) /locus_tag="SKA53_01291" CDS complement(249093..250124) /locus_tag="SKA53_01291" /note="COG2089 Sialic acid synthase" /codon_start=1 /transl_table=11 /product="polysialic acid capsule biosynthesis protein SiaC" /db_xref="CDD:11797" /translation="MDIAGRKIGPEHPPLVIAEIGINHGGDLAVAKEMVRLAALSGCE MVKHQTHIIADEMTEEARQIFPPNADVSIWEVMEACALSLDEEAELKRYTESLGMIWI STPFSRAAADFLQDLDVPAFKIGSGEADNLPLIRHIARMGKPVIMSTGMQSIESIRAS VAILDGAGVDYALLECTNLYPSPPEIVSLQGVTDLKNAFPRAVIGFSDHSIGPNMALA SVALGACILERHYTDSRYRKGPDIINSMDPAELRYLIDRSREIHTALRNPKQRTAAEE PVYRFARASVVADRDLPAGHVITEADIWARRPGSGEIAGYDFDKVLGRTTTRALPRNT QLKWSDLDG" gene 250252..250959 /locus_tag="SKA53_01296" CDS 250252..250959 /locus_tag="SKA53_01296" /note="COG2365 Protein tyrosine/serine phosphatase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12037" /translation="MFRKLQQMLEQKEQAFRNSFGHDITDPAERRRSQWHLDWLDHGI LRRRWHNFDLVAPGVYRSNHPNHSRFAAYAQMGIKTVLNLRGAALQPHHLFEVESCAT LGLTLVNVQMAARRAPDRDELLALLDAFATMERPFLMHCKSGADRTGLAAAIYLLHYQ DAPIAQAKRQLSFRYVHIRRTSTGILDHFLDVYAARTAQSPIGIADWIKTEYDRAALT RSFAVKQAALWPWQGWR" gene complement(251081..251788) /locus_tag="SKA53_01301" CDS complement(251081..251788) /locus_tag="SKA53_01301" /note="COG1083 CMP-N-acetylneuraminic acid synthetase" /codon_start=1 /transl_table=11 /product="acylneuraminate cytidylyltransferase" /db_xref="CDD:10805" /translation="MIIGHIGARAGSKGVPGKNFRLLHGKPLIDWSLDQLFACDRIDQ VVVSTDCPDIYAHAIKRGCLDIGLRPAELATDTAAKWHVWQHALAAVEKQTGPATTFL DLDCTSPLRLPKDIEAGLDLFAAEHPDMVMSCVESRKNPYFNILETDASGALHVSKPL PGGVVARQQAPQVYDHVGLVYVLRPDYLRAAQSLFEGRVIPLVLPVERGLDVDSPFDW DIIDFLMGQQIAQGLRG" gene 251787..251978 /locus_tag="SKA53_01306" CDS 251787..251978 /locus_tag="SKA53_01306" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLVFLVVIAAKGPCWRRVAILPASALAYNPACTLQALRAAIPAG LEGVWKQSIGLTHFNHLFA" gene 252126..253619 /locus_tag="SKA53_01311" CDS 252126..253619 /locus_tag="SKA53_01311" /note="COG0226 ABC-type phosphate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="OmpA domain protein" /db_xref="CDD:12236" /translation="MAQDVTISSKDKAVTITGTLVSFDDETYLLDTEIGQLRLSRLAT DCLGAACPQTIVTLDLDVAVTEAQTASLLQALVNGFAGLRGLSGLSMPDNTGVVARID MLNIQTNSAAGVVNVAVQGADATFVQLVQNDIDLALTKVPVPAAIAQSVVVAGGTDLR DLSRERVVALDALVPIVHPANTLRSVSLAELALVASGRITNWAELGGDNAPIRMLLPA QGGSVDTAFGELVLDPNRARLRANAERVSDDSAVAAAVMADPNAIAIATLANAGDAEI LPIRQTCGPLAYATDFAIKAEEYPLSRRVFAYAGDAVMSGTQAAFIDFMTSPAAQPMI QAVGYVDQSVVAQPISLQGTRMTAAILSASTGATLAAVQNLSRDLATADRLSTTFRFA SGSANLDNKALEDVQRMVDFLNSPAARNREILIIGFTDDVGRFDLNERLALLRAGSVR NALVTALGGDVLAGRTSVASYGPLAPVGCNDTADGRESNRRVEIWLR" gene 253749..254129 /locus_tag="SKA53_01316" CDS 253749..254129 /locus_tag="SKA53_01316" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13806" /translation="MVVAGQPARAQAGLSLSLVTDRPDAARGLVARLAAVSGGTIALN VTQRPSTDAAAFLQLVSSGAADIYLSATEAFVGSNPAFGIFSAMPGGMSPSELEGWMS AGDGRFPAGPAGYGTRHKGLYDRR" gene 254116..254745 /locus_tag="SKA53_01321" CDS 254116..254745 /locus_tag="SKA53_01321" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13806" /translation="MIGDDGPLPLWSKAPLTGLDDLTGAAVGSVGLGVHAMRALGVGT VVDIRAEAVDLASLDVFEGLSVAQMESAGLLASFAHMTTPNAGRRTAALSVGINLRTW NALSDAQKAIVERCIMAEHGLNRTISMHQSALTLQAAGAAINRHAMPTDIWDAQIAAA NQVMSDIFAASTLDADVAGGYLFFISDVAGWSEIGEAAFVAARKGALGQ" gene 254742..255896 /locus_tag="SKA53_01326" CDS 254742..255896 /locus_tag="SKA53_01326" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical extracellular solute-binding protein, family 7" /db_xref="CDD:13806" /translation="MTDAAKDKTMLNAPSTAKAMSRRRALLGCGAALTGAAALAAPAI AQGAPRILRLASSWPAGLGGLADSATRLAEQINIVSDGRYHIELYWPGELVPAFGVHD AVGAGEVDLYHSAEYYFQNKHRGFNFFTTVPLGLTTPEQTAWTKFGGGQALWDELNAR YNVKAIACGGTGIQMGGWFNKEILTTDDFEGLIMRLPGLGAQVLAAMGATAVSLPADG IVSALFEGSIDATEWVGPYNDLQFGFQKLLTTYIYPGFHEPGTMASFGMNLDLWNSLD ARDRALFETICDAELTSHTADFYGNNGIALVQLLAESGVQPTRLPDDVWNELSRVSFD VTASVANDDDLGRRIVESYEAYRALVNGAGAISQTEYFARRGAVDLFADL" gene complement(255949..257661) /locus_tag="SKA53_01331" CDS complement(255949..257661) /locus_tag="SKA53_01331" /note="COG0143 Methionyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="methionyl-tRNA synthetase" /db_xref="CDD:10018" /translation="MARHLITSAIPYINGIKHLGNLVGSQLPADLYARYLRKRGHEVL FLCATDEHGTPAELAAAKAGKPVAAYCAEMHAVQARIADGFGLSFDHFGRSSSPQNHK LTQAMAGRLAEMGLIREVTEDQVYSVTDGRFLPDRYIEGTCPNCGFDSARGDQCDNCT KQLDPTDLINPRSTISGATDLEVRTTKHLYLRQSELKAALADWIDSKKDWPILTTSIA KKWLNDGDGLQDRGITRDLDWGIPVRKGDQDWPGMEGKVFYVWFDAPIEYIACAQEWQ DAGKGNDWERWWRTDKGAGDVRYTQFMGKDNVPFHTLSFPATIMGTQQPWKLVDYIKS FNYLNYDGGQFSTSRGRGVFMDQALDILPSDYWRWWLLSHAPETSDAEFTWDAFQQDV NKDLADVLGNFVSRITKFCRSKFSETIPAGGEHGAPEHALIAALTQRLTAYQGHMDAI EVRKAAAELRAIWVLGNEYLQANAPWTTIKTDPDMAAMQVRLGLNLIRLYAVLSAPFI PDASKLLLEAMQTDDADWPDDIGAALTALPAGHAFSVPDNLFRKITDDERADWAERFA GVRT" gene 257633..258262 /locus_tag="SKA53_01336" CDS 257633..258262 /locus_tag="SKA53_01336" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAEVIRWRAMRRPCKVSPLHNHVTQQTPDARHLLRRSILGFTQS SQTIFNKRLPSMRLLAAVVTALTLANPLHALEGYGAIGGDYALPHAGSSDMLISVLGG VTTADAPLAFGAEAEFGLALGASSDFNTRRLRGVARYDFGTVTAFGAAGVDQFVYDNV TDTGLSLGLGGEFELQGNMALRGEFIRSFIRDGDTENTTTTRLGLVYRF" gene 258277..259317 /locus_tag="SKA53_01341" CDS 258277..259317 /locus_tag="SKA53_01341" /note="COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="oxidoreductase, aldo/keto reductase family" /db_xref="CDD:10536" /translation="MQKIALGGSDIMVTDCCLGTMTFGNQTDRADAYAQIDMALDAGI NFLDTAEMYPVNPIRAETVGLSETIVGEWIAKTGRRSEVVIATKVSGNNPGWVREGYG YDGAVIRQTVDASLRRLQTDVIDLYQMHWPERGSYAFRQNWTYDPSGQDRQQTMDHML DVLSALDDCVKAGKIRAIGMSNESAWGMTKWIDQATAAGLPRMVSVQNEYSLLFRLYD TDMAEMAVNEDVTLLAYSPLACGLLTGKYQHDVPAGSRLSINGNLGGRMTPRTLPVTQ VYLDLARDHGVDPVHMAMAWQATRPFPVSAIFGATNTGQLAHILAGRDTMLTDELLAA IGAAHRAHPLPY" gene 259412..259942 /locus_tag="SKA53_01346" CDS 259412..259942 /locus_tag="SKA53_01346" /note="COG3040 Bacterial lipocalin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12379" /translation="MMAVLLAGCAGHPGEPRGALFEVYRDTSVPLSSKAVFEPARFLG TWYEVARYPVPFEAGCVGVTAEYGALPDGRISVRNTCRKPDGTVRSVIEGAADIVGPG RLKVRFASVPFVGADLWVLWADETYRTVVLGAPDGRSGWILNRDPVIPADRLAAARAM LAFNGYDLGRLMLVQP" gene complement(259899..260798) /locus_tag="SKA53_01351" CDS complement(259899..260798) /locus_tag="SKA53_01351" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA binding protein, putative" /db_xref="CDD:16530" /translation="MMRKIDKRDRARLFRDRLVAAMDRTGIKQAALARWTGVDRSTLS QLLKDQGARLPNAQLVAECSAALGVSADWLLGLSDFPEQAAALVAAAISMPEASRAMG DDQIFAWHQEAAGYKIRHVPSGLPDMLKTTDMLRWEYAPAVGKTIEQAIGASADRLGW MQQSKSDYEIALPLSELDSFARGQGYYAGLPVDVRQDQLRRFRDLHDQLYPALRLHLF DKRAVYSAPVTVFGPLLAVIYLGRNYIAFRDTERVTAITRHFDMLVRGSKIGQGDMAA HFDALIRLAATAEPASDGPDHSR" gene 260881..261759 /locus_tag="SKA53_01356" CDS 260881..261759 /locus_tag="SKA53_01356" /note="COG3239 Fatty acid desaturase" /codon_start=1 /transl_table=11 /product="fatty acid desaturase family protein" /translation="MKTRAFSRIAWPTLCLILGCYTVWGAALWLLPLPLGVIVAGLAI ALHSSLQHEAIHGHPFGVQWINDLLVWPPLTLVIPYARFAATHRAHHHDAVITDPYDD PESNYLDPAVWDRLPRILQVVLGWNNTLAGRLLLGPLLGTVGFGICEWRQGTAALGRA WLLHLLVMVAMLALVAASPMPVWAYLLAAYLGLSLLKLRTFLEHQAHARASGRSVIIE DRGPLAFLFLNNNLHVVHHMHPDVPWYALPGVYRARKDHYLRRNGGYLFRSYGQIFRL YLWRAKDPVPHPLWPR" gene complement(261756..262427) /locus_tag="SKA53_01361" CDS complement(261756..262427) /locus_tag="SKA53_01361" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family" /db_xref="CDD:25476" /translation="MTVLRDAATIIVLRDAATRPAVLMGQRGASMAFMPGKFVFPGGA VDPNDSRIPLPDLSPRDHARLQADSALAPDSLAAAAIRELWEETGQILGAPAQWPDPP QGWRGFAATGHRPNGAALQFFFRAVTPVGAPRRFDARFFLANAADLVTDPDDFTRAED ELANLQWVALDQARSFDLPFITQVVLAELMGHIRRGGDLADVPFFRNDDEAHLVSRLG GRSPL" gene complement(262424..262819) /locus_tag="SKA53_01366" CDS complement(262424..262819) /locus_tag="SKA53_01366" /note="COG1405 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDTSTTSYAAERPTKPAIMNGLRCRCPNCGQGKLFDHYLHVAD TCSQCGEDLSHHRADDGPAYLVILLVAHIIGFAIHFMWVAWRPDPWVMATVLSLGAVG LSLALLPPMKGMIVGIQWARRMHGFGLNS" gene 263004..263297 /locus_tag="SKA53_01371" CDS 263004..263297 /locus_tag="SKA53_01371" /EC_number="2.7.7.6" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma-70 factor" /translation="MKNGWIAAGLVATLALTAGGAFAQGHRAGPDFAAMDGDGDGAVT LAEFTAFTQDRAATRAERMFTRLDADGDGMVTQAEIEAAREAHGGRHGKSGRD" gene 263372..263965 /locus_tag="SKA53_01376" CDS 263372..263965 /locus_tag="SKA53_01376" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="sigma-24" /db_xref="CDD:11308" /translation="MMAVSDPFAHASDEDLLLAHASGDPRAAGALTQRVLPRVLAQAL RMLANRAEAEDVAQDAMLRLWRIAPDWRRGEAQVTTWLYRVVANLCTDRLRKRRHVAM DEIAEPLDSAPSVAAQMQTRARLRALSDALAQLPERQAQAVALRHLEGLSNPQIAEIM DISVASVESLTARGKRALSAIMAGRRAELGYDDDEPT" gene 263943..264290 /locus_tag="SKA53_01381" CDS 263943..264290 /locus_tag="SKA53_01381" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTMTNPPDDMLSDLFAQARKLTPMPDDALIARVLADAARPLPVR HPQPSVWAQLRAMIGGWPALGGLATATVAGIWIGIAPPPLVADYAAALLDEPVSLGLS PEEFMIAGEFSDG" gene 264283..264726 /locus_tag="SKA53_01386" CDS 264283..264726 /locus_tag="SKA53_01386" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MADLVQTRPSRIWRIVLVVSLALNLAVAGMIGGAVVSGRFGEHP SPRIDFGVGPVARAFSDDERRAIARALRADRSLRGDDFRGQMAAALRADPYDPAVTQA LIEDQAARLSQVQARARMVVLDRIAAMSPDRRRAFADRLDRDQRR" gene complement(264731..266059) /locus_tag="SKA53_01391" CDS complement(264731..266059) /locus_tag="SKA53_01391" /note="COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain" /codon_start=1 /transl_table=11 /product="two component diguanylate cyclase" /db_xref="CDD:13026" /translation="MLAAQFAVEACASSAEARAIIAKQCPDLILVNLSDPTEDRHGFC TALKADPDTSTIAIIAVGTADTSRARFAALDAGADDVLARPINDALLLARIRSLLRAR SVTEELLLRDSTSRALGFCENRDSLANTGRITVITPEAAPMPELIATLNAGLGHCVVV QTASAVLRHNDEVHCADLLIIPAANPRDEAVALFSLVSDLRSRVDTRLASLLVMVPNG NPEAAAMFLDLGADDVVMQNALPQEIILRAKALVRRKQLHDALRRNLLDGLQAAVTDP LTGLFNRRYADHHLARMSEQSAVAGSALAVMMIDIDHFKAINDTYGHAAGDRVLVALA ARLRDNLRAVDLVARIGGEEFLIAMPRTSARQAQGAADRLRRLVSQTPFDLGEAYAPI PVTVSVGVALSDEAGQTQPDTHLMCDLADAALYRAKSAGRDCVAMHLSAA" gene 266217..266495 /locus_tag="SKA53_01396" CDS 266217..266495 /locus_tag="SKA53_01396" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGPDQAQVIALQALGWMAGQDEICTTFLGASGASVDDLRDRAAE PAFQAAVLDFLTMDDNWVMAFCDAQGLAYDMPLRARYALPGAEQVHWT" gene 266486..267262 /locus_tag="SKA53_01401" CDS 266486..267262 /locus_tag="SKA53_01401" /note="COG0546 Predicted phosphatases" /codon_start=1 /transl_table=11 /product="putative phosphatase" /db_xref="CDD:10417" /translation="MDLTLDSRRAVRSGAGQTGKENTVIAGILFDKDGTLFDFNATWG AWTRAMLVAEAGDDPILCERLAAALGYDMENARFHQGSIVIASTVDVVADAIIGVLPG DVDKAALIGRMNAGSAQVAQVEAVPLRPFTSGLRQLGLTLGLVTNDAEAPALRHLDKA GIRSDFAFVAGYDSGFGAKPGPGQLIGFCRATGLAPDVCVMVGDSTHDLHAGRAAGML TVGVLTGPAPRAELAGLADIVLDSIADIPAWLRREKLIAD" gene 267344..268903 /locus_tag="SKA53_01406" CDS 267344..268903 /locus_tag="SKA53_01406" /note="COG5598 Trimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase family protein" /db_xref="CDD:25126" /translation="MQAEAKTKRRGGGRAGNAIRRGTASIDQMLWHLPVNTDRPTEPL TPEGVQAVHDGAMRILEDIGIEFLNQEALALFRQAGCIVNGTNVRMGRDWVMEMLAHA PARFDITPRNPERKITIGGNHILFGAVASPPNYHDLEIGRKVSGTRAQCANLLRLTQY FNCIHFSGGYPVEPVDVHASVRHLDVIYDKMILTDKVAHAYSLGRERIEDAMEMVRIA GGLTEDQFAAKPHMYTNINSTSPLKHDVPMIDGCLRCIRRGQAVIVTPFTLAGAMAPV TMAGAVTLSIAEALSTIALFQYVRPGAPCVIGTFTSNVDMKSGAPAFGTPEYMRATQM TGQMARFYDLPMRASGVCAANLADGQAMWETSNSLWSAVQSGTNLVYHAAGWLEGGLI ASPEKFIMDCEVVQMIQRYMDPMLTATGPDDIALDAIKDVGPGGHFFGTQHTQDRFEQ AFYQPFVSDWRNHEAWEAAGAIGTAERAHHLYKDILATFEAPPLDVAIKEELGDFVAR RKAEGGAPTDF" gene complement(268910..269917) /locus_tag="SKA53_01411" CDS complement(268910..269917) /locus_tag="SKA53_01411" /note="COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin" /codon_start=1 /transl_table=11 /product="zinc ABC transporter, periplasmic zinc-binding protein" /db_xref="CDD:27835" /translation="MIRFLSLCALAPTAVFAQVPQVMTDFAPVHSLTAQVMGDLGAPD VLLPAGADPHDYAMRPSDAAKLGAADLVFWTGPSLTPWLSDLLDTLAPSAAQVALLDV TGWDRLPIRDIQQFIMPAAEDDHGHDDHDDHKDDHDDHGHDDHGHDEHGHDDHGHDDH DHGDFDPHAWLDPTVAQVWLAAIADQLGTADPDNAATYTANADAAIARLTALDAELAA QLAPFAGLAYILPHDGYQYFEARYGLSAAGAIAGIDARTPGPAQVASLRDQMADSNIV CVLSDAEIGDRWATVVTEGTGARTAQIDGVGAGLDGGQALYEALLRRLADDFAACLGG A" gene 269987..270475 /locus_tag="SKA53_01416" CDS 269987..270475 /locus_tag="SKA53_01416" /note="COG0735 Fe2+/Zn2+ uptake regulation proteins" /codon_start=1 /transl_table=11 /product="Zinc-uptake regulator, Zur" /db_xref="CDD:10603" /translation="MSQDPMAFARHDHDSCISVALAAADTACAARKVRMTPVRRRVLE ILLESHSALGAYDVLARLDAEGLGSKPPVAYRALAFLVEQGFAHRIERLNAFIACMHP GAAHDPAFMICRKCGTVAEAQASSRSLTQAAAANGFQLEQTMIEAEGICPACQPDAAA CA" gene 270466..271212 /locus_tag="SKA53_01421" CDS 270466..271212 /locus_tag="SKA53_01421" /note="COG1121 ABC-type Mn/Zn transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="zinc ABC transporter, ATP-binding protein" /db_xref="CDD:10843" /translation="MRLIDARHIDFGHGGQKVLQNVSMSLDQGEIVTIVGPNGSGKST LLRLLIGALTPQKGSVTRAPGLRIGYVPQKLHIDPTLPITVARFLNLPKPVPAKAATE ALRTAGVAGLDHQQMSQLSGGQFQRVLLARAILANPHVLMLDEATQGLDQPGSAAFYR QIAAVRQDLGCAVLMVSHELHVVMSASDRVICLNGHICCEGTPEVVTAAPAYRELFGT GTGGALALYRHEHDHDHSHHHHHHHPEAAE" gene 271212..272009 /locus_tag="SKA53_01426" CDS 271212..272009 /locus_tag="SKA53_01426" /note="COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components" /codon_start=1 /transl_table=11 /product="zinc ABC transporter, permease protein" /db_xref="CDD:10830" /translation="MLDDFLLRAALAAVGTAVAAGLLGCFVVWRRMAYFGDATAHAAV LGVALALLFGTSITLGVGIVALCMAVLIHSLSGQAVAVDTILGVLAHGALALGLVAVT LVPGQRIDLDAYLFGDVLSVTRADLAVIWGGGVLLVGVLWWQWSAMLTATLNPDLAHA AGINPRRQQLILTVLVAAVVAVAIKVVGALLITALLIIPAASARSFASTPERMAFFAM AIGALSALGGLRLAVHFDTQVGPSIICVAVLIFAVSRVGKHLPRLPI" gene complement(272077..272514) /locus_tag="SKA53_01431" CDS complement(272077..272514) /locus_tag="SKA53_01431" /EC_number="3.1.-.-" /note="COG1490 D-Tyr-tRNAtyr deacylase" /codon_start=1 /transl_table=11 /product="D-tyrosyl-tRNA deacylase" /db_xref="CDD:25267" /translation="MRALVQRVSTASVSVDGAVIGQIGQGLLILVCAMAGDTPDASAS LAAKIAKLRIFKDADGKMNQSLLDTGGSALIVSQFTLAADTSRGNRPGFSAAASPDQG RALYDQFIADIGTLDIPTATGSFGADMAVALVNDGPVTIWLDV" gene complement(272511..273413) /locus_tag="SKA53_01436" CDS complement(272511..273413) /locus_tag="SKA53_01436" /note="COG0524 Sugar kinases, ribokinase family" /codon_start=1 /transl_table=11 /product="putative Fructokinase" /db_xref="CDD:28242" /translation="MILCCGEALIDMLPRQAGEEACFAPHAGGAVFNTAIALGRLGAP VQFFSGLSSDLFGTILRNQLHASGVDASPAAISDRPTTLAFVTLTNGHAAYAFYDENT AGRMLAPADLPDTRADAVFFGGISLVVEPCAAAYEALMLREAPRAVIMIDPNIRPGFI KDEPAYRARLDRMLARADIIKISDEDLAWITGNTDAVALRAATGAAVMLLTRGADGVT VITAAGSFDVPAVKADVVDTVGAGDTFSAGFLAYLDAQGLLTKSAIALADGDVLARAA AFGARVAAITVSRAGANPPWASEL" gene complement(273429..274523) /locus_tag="SKA53_01441" CDS complement(273429..274523) /locus_tag="SKA53_01441" /note="COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10916" /translation="MPPTTPVDHRFACDACGANMRFDPQTNQLVCQHCGTTQAMPQTN LTGSIKELDFKRALAQRLPQADLEITRIVACDSCGAQFEFDPDIHATQCPFCASPVVS DTGTHRHIKPAGLLPFALDESTAHKAMNDWLGRLWFAPNGLQDYARKGRQMTGIYVPY WTFDAATASRYTGQRGTHYYVTQTVMRNGKATQVRIRKTRWRAVSGQVARFFDDVLVL ASTSLPKRHTDGLEPWDLSAVEPYKPDYLAGFRAEGYQIALEDGFTQARGYMDRMIAR DVKYDIGGDDQRIGQIDTQISDVTFKHILLPIWLAAYKYRGQSYQFVVNGRTGRVQGE RPYSAWKIAFAVVIGVILAAGAGFVIANSQ" gene complement(274535..274957) /locus_tag="SKA53_01446" CDS complement(274535..274957) /locus_tag="SKA53_01446" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTQRRLTILLHWSMVMMLLAMIKGGSANEILRWAFVGAGTVWLA MTAMRGMLGKPGPKLQGTLRMAYPWMHRGLYGVMAASVAINAAALLGFASLDLAWNSL LVLLMVGTFHGLFHFWRHNVLYDNALRMMLPRFMHKIL" gene complement(274965..276056) /locus_tag="SKA53_01451" CDS complement(274965..276056) /locus_tag="SKA53_01451" /note="COG4260 Putative virion core protein (lumpy skin disease virus)" /codon_start=1 /transl_table=11 /product="Antifreeze protein, type I" /db_xref="CDD:13508" /translation="MSIFDFLSGQFIDVIHWTDNTRDTMVWRFERHGHEIKYGAKLTV REGQAAVFVHEGQLADVFTPGLYMLETNNMPVMTSLQHWDHGFKSPFKSEIYFVNTTR FSNLKWGTKNPIMLRDPEFGPTRLRAFGTYTVRVADPALFLREIVGTDGEFTMDEISY QIRNVIVQEFSRALAASGIPALDMAANTADLGKLVAGAIDPTLKNYGLSLPELYIENI SLPPAVEKALDARTSRGIAGNLDDHLKYKAAEAMATENAAAGQAMGMGMGAALGMQMA NPQTGPWGPVTPPPAPPPPVEHVWHIAEGGQVSGPYSKAAMGRKVTDGTLTRASMVWT QGQDGWMTAEDVTELAQLFTVMPPPPPGA" gene complement(276081..277034) /locus_tag="SKA53_01456" CDS complement(276081..277034) /locus_tag="SKA53_01456" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRTPARQSLALAIFAAVLAGCAAAPAPEPVTLPEPPIAGPDQPV LRDPSLTSRALMAHYANLQTQMLTQNLLRSDGGAADTPYTDTMLARNFAQIALATEYA DNSDFSVYRQGASTLRRWQQPIRMNVLFSDTVPLAQRDQDRTSVAAFAGRLSRLTGVP IRQSDDNPNFHVLFLDEDDRRAAAPLIRALVPNISGATLRGIINLPRDQLCLVAGVFP PGQSGYAQAVVVIRAEHPSLIRAACIHEELAQGMGLANDSDTARPSIFNDSEEFALLT RHDGLLLRILYDPRLAAGMPPATAAPIAADIARDLIAAGAS" gene complement(277038..278231) /locus_tag="SKA53_01461" CDS complement(277038..278231) /locus_tag="SKA53_01461" /note="COG3853 Uncharacterized protein involved in tellurite resistance" /codon_start=1 /transl_table=11 /product="tellurite resistance protein" /db_xref="CDD:24040" /translation="MSEFTREQAAKAVADVEKVTAVVLPDLPRDLIVLDSADAPTKTE ITRRMAEISIGDTNSIVSFGASAQTDLQAISQSMLAGVRNKDVGPAGDSLRNMVTTIR GFSVSELDVRRDRTWWEKLIGRAAPIAKFTARFEEVQGQIDKITDDLLRHEHVLLKDI ESLDMLYDKTLQFYTELGLYIAAGAAKLAELDATTIPAKEAEVAAAPEDAAMMKAQEL RDLRSARDDLERRVHDLKLTRQVTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWET QLAQAVTIQRSSEAAKAVRAANDLTNELLTANAQNLRDANKIIRTEMERGVFDINAVK AANANLIATINESLEIADEGKRKRAEAEAEMQKMEEELKQTLSAARARKTGGGDSIGI ATGRA" gene complement(278231..279124) /locus_tag="SKA53_01466" CDS complement(278231..279124) /locus_tag="SKA53_01466" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MARRFGGRFSPDAAAPQPRAAAVDPVRIKAAGSRGRLLYAPPIV LVVTSLGAGPAALVTALAGAGVLTLAAWLLQEGLRAQAAYDARKIARRPMLPRKILAS ALTGLGVALAALTGDSDIMGSALYGVAALALHVAAFGIDPLADKQVAGLDRFQQDRVA RVVDEAEAHLAQMTTTIASLNDRRLIARVAIFQQTARHMIATVEADPRDLTSVRRYLG VYLMGARDATAKFVALYRHTNDTTARAKYESLLTDLEQNFAARTEKILVDDHADMDIE INVLRDRLQREGVSLKTKGNE" gene complement(279124..279327) /locus_tag="SKA53_01471" CDS complement(279124..279327) /locus_tag="SKA53_01471" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLRLILLLSFVAVLALGFLAVLGAVRVMAGGAADKDPEPMPAPF RRISYIVLVVLMFGVTSGWLGSA" gene complement(279418..280236) /locus_tag="SKA53_01476" CDS complement(279418..280236) /locus_tag="SKA53_01476" /note="COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases" /codon_start=1 /transl_table=11 /product="RNA pseudouridylate synthase family protein" /db_xref="CDD:10905" /translation="MSNDTPQGDRIAKVLSRAGVASRRDAERMITEGRVSVNGKVITS PALNVTDADRIVVDGKAMRAPEAPRIWLYHKPAGLVTTERDEKDRPTVFASLPEDMPR VMSVGRLDLNSEGLLLLTNDGGVKRRLELPSTGWLRRYRVRINGSVSEARLEQLRAGI TVDGIRYQPMIVTFDRQQGANAWLTVSLREGKNREIRRAMEAIGVTVNRLIRVSYGPF QLGNLEAGAVEEVKGRVVRDQLGLSDKDLGKDSAKPTRVRKPVNRPVTGKKRQG" gene 280301..280747 /locus_tag="SKA53_01481" CDS 280301..280747 /locus_tag="SKA53_01481" /note="COG0590 Cytosine/adenosine deaminases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10460" /translation="MVFRSHMDIALTEARAAAARGEVPVGAVITQDGAIIAQAGNRTR ELNDPTAHAEMLAIRAACAALGQERLTGCDLYVTLEPCPMCAAAISNARIARLYYAAA DPKSGGVAQGPRIFTHPQCHHRPDVYDGISATAAEQLLRDFFAAKR" gene 280824..281477 /locus_tag="SKA53_01486" CDS 280824..281477 /locus_tag="SKA53_01486" /note="COG0628 Predicted permease" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MDWHSHIDAYCERIDPGFWSEPINALTNLAFLVAALWVWPRTAG LPLARALAAIVFAIGIGSLLFHTFATLWSALMDVVPIGAFILLYLFAVHRDVIGLGLW SALGATALFIPFAAIMVPLLGMLPFFGISAFYWTVPILLVIYALALRKTPQITRGFLT GAVLLALSISARSVDETLCNLLPFGTHFLWHVFNAVMLAWMILVYRRHMLAGAARDR" gene 281512..281799 /locus_tag="SKA53_01491" CDS 281512..281799 /locus_tag="SKA53_01491" /note="COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA(Gln) amidotransferase, C subunit" /db_xref="CDD:10590" /translation="MSIDTETARRVAKLARIEVAEEALPALASEFNAILGFIEQLNEV DVDGVEPMTSVTPQRLTRRADVVTDGNQQAAVLKNAPDAREGFFAVPKVVE" gene 281799..283280 /locus_tag="SKA53_01496" CDS 281799..283280 /locus_tag="SKA53_01496" /EC_number="6.3.5.-" /note="COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA amidotransferase subunit A" /db_xref="CDD:15348" /translation="MSDLTKLTIAGARDAMRKGDVTSAEITQACLTAIEGADALGAFV HKTPEIALAQAQAADARIKAGDAPAMCGIPLGIKDLFCTKGVPSQAASRILEGFKPEY ESTVTGKLFDAGAVMLGKLNMDEFAMGSSNETSVYGPAINPWKVDDRNLTPGGSSGGS ASAVAADLCLAATGTDTGGSIRQPAAFTGITGLKPTYGRVSRWGIVAFASSLDQAGPM TKDVRDCAIMLQAMCGHDARDSTSADLPVPDFEAALTGDIKGKTIGIPREYRMDGTPA EIEKLWSDGTAMLRDAGAKIVDISLPHTKYALPAYYVIAPAEASSNLARYDGVRFGHR AKLGAGDGITQMYEKTRAEGFGPEVQRRVMVGTYVLSAGFYDAYYNRARRVRTLIKRD FDDAFAAGVDAILTPATPSAAFGIGEMADADPIKMYLNDVFTVTVNLAGLPGIAVPTG RDAQGLPLGLQLIGRPWEEAELLNIAYRLETAAGFVAKPAKWW" gene 283306..284034 /locus_tag="SKA53_01501" CDS 283306..284034 /locus_tag="SKA53_01501" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGVDGMKTGLLILVGALVLSACAQQQFDRPRGVGFDDLSNFDTD RARREAALAGAVDPFAPPPAVQSTPIGPVGGVIAASDLAAAGIGQGGTGAPLASSPAQ PGLVPQIATNTGISDEQDFDAVAGRETIESDAQRRQAAIAAQEQIAPQPLPERPAATG PNVVEYALTAPNAKGQEWYSRSLLSGQARFQRNCAAYATADDAQRDFLARGGPERDRL GIDPDGDGFACGWDPEPFRRAVQN" gene 284094..284711 /locus_tag="SKA53_01506" CDS 284094..284711 /locus_tag="SKA53_01506" /note="COG3023 Negative regulator of beta-lactamase expression" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase, family 2" /db_xref="CDD:12364" /translation="MVVIHYTAMASAAAACDTLCNPATQVSAHYLIVQDGTLLSLVPE DLRAWHAGAGRWGAVSDVNSHSIGIELANDGASPFAAPLMDALEDLLRAIMPRWDIPP ARVIGHSDMAPQRKIDPGPRFDWRRLALQGLSVWPEAGQADPAGFAAGMRAFGYTATD DPDLLLQCFRLRFRPWARGPLDATDAGLIADLARRFPVDAGGQAA" gene complement(284708..284983) /locus_tag="SKA53_01511" CDS complement(284708..284983) /locus_tag="SKA53_01511" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MISFAGSTPRAVPIWHCSRWGLPCRSGCPSRGGLLPHRFTFSPL YEVVCSLWRFPWGYPRRALPGTVLCGVRTFLEPMTGPQPSSHPRSAS" gene complement(285317..285727) /locus_tag="SKA53_01516" CDS complement(285317..285727) /locus_tag="SKA53_01516" /codon_start=1 /transl_table=11 /product="possible activator of photopigment and puc with BLUF domain" /db_xref="CDD:16235" /translation="MSLFRAIYTSQPFGFDETILSSILMQARKANARDDITGALICRA DIYLQWLEGPQDKVRDAIRRISHDDRHLEVTVHVAEPTDARVFGEWAMLHDPAKTWIW SQSDIAAGALDRTTPDEITGFFLRLAETAAVDSQ" gene 285977..286144 /locus_tag="SKA53_01521" CDS 285977..286144 /locus_tag="SKA53_01521" /note="COG0267 Ribosomal protein L33" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L33" /db_xref="CDD:10142" /translation="MAKPTTIKIRLNSTAGTGHFYVTKKNARTMTEKMAIKKYDPVVR KHVEYKEGKIK" gene complement(286291..287082) /locus_tag="SKA53_01526" CDS complement(286291..287082) /locus_tag="SKA53_01526" /note="COG0670 Integral membrane protein, interacts with FtsH" /codon_start=1 /transl_table=11 /product="conserved hypothetical membrane protein" /db_xref="CDD:10539" /translation="MLTNDAAPGVAVFFLEGNMAQYDTIRTAGGVRTAAIDEGLRAHM SKVYGTMSVGMLITFAVAWAVGTAPALLGVFRDPITLQPNILGWIVMFAPLGMIFGFG AMINRFSAAAAQTFFYAFAAVMGLSIAWIFVAFTGMSIAQIFLITSIAFASLSLYGYT TKKDLSAWGTFLMMGVIGIVVAMIINLFLQSPAIMFAISILGVLIFAGLTAYDTQRIK TEYVAHAAHGDAEWLGKSAIMGALSLYLNFINMFMFLLQLFGNRE" gene complement(287180..287326) /locus_tag="SKA53_01531" CDS complement(287180..287326) /locus_tag="SKA53_01531" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQAAQLARQRRALAALDAHILCDIGITADDAQAEAGKPVWDVPR HWLA" gene 287325..287471 /locus_tag="SKA53_01536" CDS 287325..287471 /locus_tag="SKA53_01536" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIRDHKGGRRLVSMQIPACEKLAMTFPFLMNGVVYIVMLDMYWR TRYK" gene 287510..288379 /locus_tag="SKA53_01541" CDS 287510..288379 /locus_tag="SKA53_01541" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="Transcriptional regulator, LysR family" /db_xref="CDD:10453" /translation="MPRNLDLTALRSFVAVADTGGVTKAAGLLHLTQSAVSMQLKRLE ESLDAPLLDRAGRGIALTAQGEQLLSYARRMLVLNDEIYGRLTSNAYEGEVTLGVPHD IIYPVIPQVLRRFAAAYPRMRVQLSSSFTSTLLDEYRRGGIDMILTTEDSVGQDGETL TAIPLVWLGAPGGQIWKERPLRLAYEHRCIFRGFVQRQLDAAGISWEIAVESHSSRTI EATVSADLAVHTMLAGAEPRHFERIAHGGALPDLRDFNVNLYHADTDNPVIRDLAGFI RDGFYTLQAPAMA" gene complement(288369..289328) /locus_tag="SKA53_01546" CDS complement(288369..289328) /locus_tag="SKA53_01546" /note="COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="oxidoreductase, zinc-binding dehydrogenase family" /db_xref="CDD:10474" /translation="MRAFQVSSFTNPPALVDIAAPLPAPGEVLLDIAACGLNFADLLM AKGSYQDTPMPPFTLGMEVCGTVTALGDGVTTPAIGTRVAVFGGQGGMAEQGVFPANL CRPVPDSMSAEVAAGFMVAYGTSHLALTHRARLQQGETLLVLGAAGGVGLTAVEIGKA LGARVIAVARGADKLAVAQAAGADHVIDSDTQDIKAVVKALGGADVVYDPVGGDAFKA ALGACRPQARYVVIGFASGDVPQVPANILLVKNVDLIGFYWGGYLKFRPDLLSDSLAE LLGWLADSRLKPHISHVLPLAQAEKALDLMRSRASTGKVVITP" gene 289595..289966 /locus_tag="SKA53_01551" CDS 289595..289966 /locus_tag="SKA53_01551" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /db_xref="CDD:16530" /translation="MKHPVDVYVGKRIRHRRWMNGTTQQQLAENVGIKFQQIQKYETG MNRVSASRLWDISNVLGVPVSFFFEGYDAQPAVETRISDMPGDILTDKEALELLRSYY AIPENQRRRLFDLARVLSEAA" gene 290036..290833 /locus_tag="SKA53_01556" CDS 290036..290833 /locus_tag="SKA53_01556" /note="COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family" /codon_start=1 /transl_table=11 /product="Inositol monophosphatase family protein" /db_xref="CDD:27906" /translation="MDQATQADLIRVAHLLADTARPVTLAHFRTAALVADTKALSHFD PVTIADRAAEQAMRDVLARERPNDGIFGEEYGQTPGTSGLTWVLDPIDGTRGYISGTP TWGVLIAVGDADGPIYGIIDQPYIGERFAGGFGQADVTGPMGTAPLSTRAPRGLDQAI LLSTFPEIGTPAQMAAFQAVSRQVRLTRYGMDCYGYALLAAGQVDLVIEAGLNAYDVQ APIAVIEAAGGIVTDWCGAPVHAGGQVLAAANADIHAAALKILRSHP" gene complement(290866..292161) /locus_tag="SKA53_01561" CDS complement(290866..292161) /locus_tag="SKA53_01561" /note="COG0402 Cytosine deaminase and related metal-dependent hydrolases" /codon_start=1 /transl_table=11 /product="guanine deaminase" /db_xref="CDD:28164" /translation="MTKHLLLGQTLGFSGNPLAGDWADTVQYDPAGGVLIDAGRIVAM GDGAALRAAHPDARLVDYTGKLISAGFVDAHMHYPQTAIIASWGKQLIDWLNTYTFPQ EARLADPAYAAEIAMRTVDLAVAHGTTTLTSFCTIHPASVDAFFTAAAARDMAVVAGK TCMDRNAPDDLRDTAQAAYDDSAALIARWHGTGRASYAITPRFSPTSTPDQLAALGAL WAENPTCLMQTHLSEQLPEIAWVRDLFPQARDYLDTYEAFGLLGARGIYGHAIHLEPR EIARLAEVGAAVVHCPTSNTFIGSGLFDLMGLARAGLTIGLATDTGGGSSFSMLRVMA ATYEIGQLRGTALHPAQLMWLATEGSAQALHMTGQIGHLGVGAAADITVLDLASTPAI AQRSARADDIWDALFPTIMMGDDRAIADVWIAGVRQGVQ" gene 292261..293634 /locus_tag="SKA53_01566" CDS 292261..293634 /locus_tag="SKA53_01566" /note="COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)" /codon_start=1 /transl_table=11 /product="magnesium transporter" /db_xref="CDD:11945" /translation="MVDIDDDLDSEAFGITDRIVADVLNAVMQGDAAAIDALLDPLHP ADIAHLIEQIDSRERRDLLTLWQGGIDGDILSELDENLREEIIQQLRPDELATALRDL DSDDVVDLVEYLGEDQQEAVLDALDASDRVVVEQALSYPEESAGRHMQSELVRAPEHW TVGDAIDYLRADVVLPDQFYHIILVDPRLKAVGYVTLGRILSNARATPLRDLTEETFR TFHVAQGVEEVAQAINHYHLITAPVVDDDGRVVGVITIDDAMAFLEEEAEEDILRLAG VGEGSLSDNVFETTKQRFPWLAVNLLTAILASLVISLFEETIAGLVALAVLMPIVASM GGNAGTQSLTVAVRALATRDLTPSNVWRVIRREALVGMLNGLAFAAVMGVVGTIWFDA PMLGVVIAAAMVVNLLVAGLAGIGVPVVMDRFGIDPALASGTFVTTVTDVVGFFAFLG LASVMLL" gene 293631..294173 /locus_tag="SKA53_01571" CDS 293631..294173 /locus_tag="SKA53_01571" /note="COG0212 5-formyltetrahydrofolate cyclo-ligase" /codon_start=1 /transl_table=11 /product="5-formyltetrahydrofolate cyclo-ligase family protein" /db_xref="CDD:25825" /translation="MTFKSAARKAAFARRAAAHQPDAASAGHLSAVLAGYRGVPIAGY IAMRTEIDPTPAMAEASAHGPVGVPVITAKGQALRFRLWEPGCAMIAGDFGAQIPATG DWMIPQILIVPLVAFSRTGGRLGYGGGFYDRTLQQLRARGPVMAVGFAYGAQEDSDLP LEPTDQPLDMIVTEQGIITP" gene complement(294227..294976) /locus_tag="SKA53_01576" CDS complement(294227..294976) /locus_tag="SKA53_01576" /note="COG0217 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25808" /translation="MAGHSKWANIQHRKGRQDKLRSKLFSKLAKEITVAAKMGDPDPE KNPRLRLAVKEAKSNSCPKDVIDRAIKKSQGGDAENYDEIRYEGYGPGGIAVIVEAMT DNRNRTASTVRSTFTKNGGNLGETGSVAFMFDRMGEIVYPASVADADTVMMAAIEAGA EDVQSDDDNHVIYCADTDLAEVSGALEPALGESISTKLIWKPNMTTEVDAEGLTKLMK LLDTLEDDDDVQRVTANFEASDAVMAAFSES" gene complement(295038..296819) /locus_tag="SKA53_01581" CDS complement(295038..296819) /locus_tag="SKA53_01581" /note="COG0471 Di- and tricarboxylate transporters" /codon_start=1 /transl_table=11 /product="trkA domain protein" /db_xref="CDD:27800" /translation="MSDLITLTQSQQAWLTLAVLVGMFVLFLREIYPTEVVAMGGVSI LLVTGVLPYQAAVDTFSNPAPWTIAAMFIIVGALVRTGALDALTRLAERQARVSPARA IGGGLIFVALASAVMNNTPLVVVMIPVFIQLSRTLGVSASKLLIPLSYAAIVGGTLTL IGTSTNLLVDGVARASGMEPFGILEIMPVGVIVVIWTFIYMYFMAPRLLPDRHSMATM LSDRSKKKFFSEAVIPPESNLIGREVNGVQLFKRDGVRLIDVVRGDLSLRRDLANVTL QVGDRVILRTEMTELLSLQATKELRRVDQISAVETTTVEVLITPNCKMADRRLGSLRL RRRYAVYPLAVHRRDANVSQQIDDMVVRVGDTLLLEGAPADIQRLAEDMNLGDVSAPS QRAYRRGHAPVAIAVLLGIVVLAALNIAPILMLAMLGVTVVLMTGCIDADEAFSFIEG RLLALIFAMLGVGSALQSSGAVEMIANAASPYMMALPPFLVVLAVYVLASTLTEMVSN NAVAVVMTPIAIGLAAALGVDPRPLVVAVMIAASASFATPIGYQTNTLVFGPGGYKFT DFLRFGIPLNITLAPIVSFVIPLIWPL" gene complement(296812..297732) /locus_tag="SKA53_01586" CDS complement(296812..297732) /locus_tag="SKA53_01586" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNRDHGLLTLALVALGAGWGLTQPLTKITVTGGYEPFGIIFWQM LIGTLLLGGLRWRTLGRLPVTPRRLAFWLMIAALGTLIPNSSSYRAAFHLPAGVMSIV ISTIPLIAFPLALALGNDRFSWRRMAGLALGLIGVALIALPEASLPDRAMVAFLPLAL IAPFCYAVEGNIVAKWGTMGLDPVQVLFGASAIGVVIALPLALATDQLRVPAAPFILA DVTMLLGAVIHVVVYTGYIWLVRRGGAVFAGQISYLVTGFGVIWAMLLLRENYSLWVW AALAAMAVGLTLVRPRVAEAPVVGKALAHE" gene complement(297729..298544) /locus_tag="SKA53_01591" CDS complement(297729..298544) /locus_tag="SKA53_01591" /note="COG1692 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="Ser/Thr protein phosphatase family protein" /db_xref="CDD:11403" /translation="MKILFLGDVMGRSGRTAITTHLPRLRADWRLDFVVVNGENATSG MGLSAPHAKLLLEAGADVITLGDHAFDQKDMLAFAAQEPRIIRPLNFSKAAPGVGARV FNAMGGRKVLVAQALGQVFMKRPFDDPFSALDAVLRQYPMGGQVQASLIDIHCEATSE KMALGHFCDGRASIVVGTHTHVPTGDAMILGGGTAYQTDAGMCGDYNSVIGMDKAEPL RRFITGMPKDRFSPAEAEATLSGLYVETDDRTGKATRVVMVRQGGKLAPSGPA" gene 298629..299543 /locus_tag="SKA53_01596" CDS 298629..299543 /locus_tag="SKA53_01596" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:14136" /translation="MSDLQAARPLPNPVAGVLWMVLTGVMFVAVTAIVKHVGDDVPAA QAAFLRYVLGLVFLLPMIRPIMAARLTGRQIKMFAIRGVVHALAVILWFYAMARLPIA EVTAMNYLSPVYVSIGAALFLGEKLPPRRLIAVLLALVGAAIILRPGVKAVESGHIAM LGTAVLFAVGYLLAKRLSGEVSAAVVVGMLSITVTIGLAPFAYAVWVTPTIAQLGWLL LVAFFATAGHYTMTLAFAVAPLTVTQPVTFLQLVWAVVLGAVVFGEAVDGWVVVGGLV IMASVSFITWREAVARRHVTPVVTQTKV" gene complement(299620..300627) /locus_tag="SKA53_01601" CDS complement(299620..300627) /locus_tag="SKA53_01601" /note="COG4175 ABC-type proline/glycine betaine transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC glycine betaine/L-proline tranporter, ATPase subunit, ProV" /db_xref="CDD:13440" /translation="MNAVEFDNVSIVFGARPQTALPLMDEGLHRAEIMTRTDQVLGVH DCSLNVAQGEILVLMGLSGSGKSTLLRAVNGLNPVVRGAVRVNDGDHSYDVTHCNATD LRRLRQKSVSMVFQQFGLLPWRSVRDNVGLGLELAGLDKAKLRDRIDQELAMVGLSER ANAPVGELSGGMQQRVGLARAFATDAPILLMDEPFSALDPLIRTKLQDELLDLQKQRG RTIIFVSHDLDEAFKIGNRIAIMEGGRIVQCGTPRDIYTNPANGYVADFVAHMNPLGV LTARDVMIAGTADGPRIDVTTPVPSHLATNRHAAAASHENGQPVGQITQSSLITRLAP L" gene complement(300624..301457) /locus_tag="SKA53_01606" CDS complement(300624..301457) /locus_tag="SKA53_01606" /note="COG4176 ABC-type proline/glycine betaine transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC glycine betaine/L-proline transporter, inner membrane subunit" /db_xref="CDD:13441" /translation="MDWLTGTKIPVGAWAKSVFDAMNRNLGFVFDIISDAMEAMIDGI LWTLETPHPFIVIAVFAGLTWVMQRNWKTPLLIVLGFFFILNQGYWRETMQSLTLVLS ACVVCMGVGVPIGIAAAHRPKLYRAMVPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLI ATVIFVLPAPIRLTYLGVASTPTALLEAAQAFGATKRQILFKVELPSATPQIMAGLNQ TIMLSLSMVVIAALVGASGLGVPVVRALNTVNTSLGFESGFVIVVVAIMLDRMLRVKQ K" gene complement(301530..302453) /locus_tag="SKA53_01611" CDS complement(301530..302453) /locus_tag="SKA53_01611" /note="COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="putative glycine betaine-binding abc transporter protein" /db_xref="CDD:11821" /translation="MKLKSSLSALAIVAAMPAFAECDLVTFSDVGWTDITATTATTTV VLNALGYQTETKLLSVPVTYISLAEGDIDVFLGNWMPTMEADIAPYREAGTVDTVRAN LEGAKYTLAVNRAAADLGIATFADIVTHADALENKIYGIEPGNDGNRLIMDMIAADAF GLTGFEVVESSEQGMLAQVDRAAGRSEPVVFLGWEPHPMNANFDMVYLEGGDDWFGPN LGEATVYTNTTAGYAESCPNVGQLLNNLEFSLAMENEIMAAISDDGMAPDAAASAWLA ANPAVLDGWLNGVTTRDGGDGMAAVKTALGL" gene 302552..303121 /locus_tag="SKA53_01616" CDS 302552..303121 /locus_tag="SKA53_01616" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, BetI" /db_xref="CDD:7613" /translation="MEPIRRAALMQATIDEIGAVGNLDVTVSAIAKRAGMSSALAHHY FGGKEQIFLAAMRHVLRVYAAEVRAALRAVHGPHARIEAVIRAGFSSTNFQPDVIAAW LNFYVLAQTSQDANHLLRIYQRRLHSNLVHDLRPMIGDRAENAAMRIAGLIDGSYLRQ GLARGLGVASDATEQVLALLEMELKETVK" gene 303118..304626 /locus_tag="SKA53_01621" CDS 303118..304626 /locus_tag="SKA53_01621" /note="COG3119 Arylsulfatase A and related enzymes" /codon_start=1 /transl_table=11 /product="choline sulfatase" /db_xref="CDD:12458" /translation="MTKPNILIIMVDQLNGTLFPDGPADWLHAPNLKALAARSTRFAN SYTASPLCAPARAAFMSGQLPSRNGVYDNAAEFASSIPTYAHHLRRAGYQTCLSGKMH FVGPDQMHGFEERLTTDIYPADFGWTPDYRKPGERIDWWYHNMGSVTGSGVAEITNQM EYDDEVAYHATRKLYDLGRGHDARPWCLTVSFTHPHDPYVARRKYWDLYEDCAHLMPQ TGPIPYADQDPHSQRILDANDRDNFTISDDDIRRSRRAYFANISYLDDKIGEILQVLD DTRQEATILFVSDHGDMLGERGLWFKMCFYDGSSRVPLMIASPAMEPGLRKVPVSTID VTPTLCDLAGVDMSEVMPWTSGESLVPLGQGGTRDAPVAMEYAAEASQAPLVSLRYGK WKYNRCTLDPDQLFDMDADPHELTNLASHPAHQGTLTQLRAKAEARWDLARFDADVRQ SQACRWVVYEALRNGSYYPWDYQPLQKASERYMRTHMDLNVLEESQRFPRGE" gene 304670..306121 /locus_tag="SKA53_01626" CDS 304670..306121 /locus_tag="SKA53_01626" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="betaine aldehyde dehydrogenase" /db_xref="CDD:25427" /translation="MNTQPTASHFINGKYVEDTAGDLIEVIYPYTGQVIAKLHAATPA IVDQALDAARLAQQQWASWTGTERGRVLRRAADIMRERNHDLSMLETYDTGKPYSETS VADATSGADAFEYFGGLAGSITGAYIPLGDNFVYTRREPLGVCVGIGAWNYPTQIACW KGAPALACGNALVFKPSETTPLCALKVAEILIEAGVPAGVYNVIQGYGAVGAALVTDP RVDKVSLTGSVATGRKVYAAAAEGMRHVTMELGGKSPLVIFDDADLDAAVSGAILGNF YSSGQVCSNGTRVFVQKGIKPAFLARLSERLQGVVMGDPLDPATNYGPMVSAAQRDIV AGFIAKGQAEGARLVTGGTIPDGPGFFLPPTVFADVTDDMTIAREEIFGPVMSVLDFD TEQEVLARANDTPYGLAAGVFTADITRAHRMAAGFQAGTCYINTYNDAPVEAPFGGMK LSGVGRENSKAAIEHYSQIKSVYVRMDKCEAPF" gene 306121..307779 /locus_tag="SKA53_01631" CDS 306121..307779 /locus_tag="SKA53_01631" /EC_number="1.1.99.1" /note="COG2303 Choline dehydrogenase and related flavoproteins" /codon_start=1 /transl_table=11 /product="choline dehydrogenase" /db_xref="CDD:11983" /translation="MQADYVIVGAGSAGCAIAYRLAEAGKNVLIIEHGGSDRGPFIQM PAALSYPMNMKMYDWGLKSDPEPHLGGRQLVTPRGKVIGGSSSINGMIYVRGHARDFD HWADTGAQGWGYADVLPYFKRMEHWHDGGHGGDPAWRGTDGPLHITRGPRKNPLTRAF VAAGGQAGYQLTADYNGEQQEGFGPFDATIYKGHRWSAASAYLRPALTRPNCTLTRAL ARRVIIEDGRAVGVEVSRGKKVEVIRANVEVIIAASALNSPKLLMLSGIGPAAHLADH GIPVVADRPGVGQNLQDHLELYIQQAATKPVTLFAYWNLRGKARIGAEWLLWKTGLGS SNQFESAGFIRSRAGVDYPDIQFHFLPIAVSYDGKTAPEGHGFQAHVGPMRSASRGQV TLRSADPEANPRIQFNYMSDPQDWVDFRQCIRLTREIFAQPAFDDYRGHEIQPGDAAQ TDADLDAFIRDHAESAYHPCGTCKMGAVDDPMAVVDPQTRVIGVEGLRVADSSIFPRI TNGNLNAPSIMVGEKAADHILRRQPLPPANDQPWMHPDWQQSQR" gene 307852..308496 /locus_tag="SKA53_01636" CDS 307852..308496 /locus_tag="SKA53_01636" /note="COG1525 Micrococcal nuclease (thermonuclease) homologs" /codon_start=1 /transl_table=11 /product="nuclease (SNase-like)" /db_xref="CDD:7668" /translation="MLKVLILLGLVLAGAAHANPSGTLRVIDADTVDVGGLRVRLFGL DAPEIGQPCVLGGQTIDCGRWAGDLVRARFGGQDARCTTRDVDRYGRQVATCDVGGVD MGQVIVAEGWAVAYRRYSMIYDLDEKAAVLAARGLWAMTMDAPESFRAARNAAPAAPD LACNIKGNISGNGRIYHRPGNRDYDRTVIDEGRGERWFCSEADARAAGWRAARN" gene complement(308493..308942) /locus_tag="SKA53_01641" CDS complement(308493..308942) /locus_tag="SKA53_01641" /note="COG3427 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="carbon monoxide dehydrogenase operon G protein" /db_xref="CDD:25113" /translation="MELSGSRVIAADIDAVWAHLNNPDTLRACIPGCEELTGSPEEGF AATVKQKVGPVSATFKGEVTLENVIPGQSYTIVGEGKGGVAGFAKGSADVVLATVEGG TALTYNATAKVGGKLAQLGNRIIGGFAKKMADQFFERFQQTVEGTDA" gene complement(309110..310510) /locus_tag="SKA53_01646" CDS complement(309110..310510) /locus_tag="SKA53_01646" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /db_xref="CDD:13119" /translation="MAIQKLYAGAKLRELRGRLAMTQKAFADKLGVSLPYLNQMENNN RPVSTTVVLGLAQEFGFDVTELQSGDEARLVGDLREALADPVFTGSAPALADLRLVAA NAPALARAFLDLHRGYRQTHERLASLDEALGREDARLRPSPWEEVRDFFHYCDNYIDA VDRSAERMAGQCQPGESIAQAAIRILAATGIGVRYAASDTLRAFDPATNQLTLATAAH PATQTFQLLLQLALVTQAPLLDATLDLARFQSDEARSIAKVGLANYFAGAALMPYHAF LQAAQDNRHDLELLAARFGASLEQVAHRLSTLQRPGAKGIPFFFVRVDQAGTITKRHS ATTLQFARFGGACPLWNVHQAFELPGQFLRQLAETPDGARYFCLARDVSKSGGSYHAP TRRYAIGLGCEVRHAEAIVYADHMDITASDAYAPIGISCRICERRNCHQRSVPPLERH LRVDPNTRGLLPYQLD" gene complement(310562..311719) /locus_tag="SKA53_01651" CDS complement(310562..311719) /locus_tag="SKA53_01651" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="multidrug efflux pump, Major Facilitator Superfamily ( MFS)" /db_xref="CDD:12168" /translation="MTLILITGISALNMSIFLPSLAAMTAYFDTEYAVMQVSLSGYLA ATAVLQIFVGPLSDRFGRRPIVIGSLLIFVIATLGALFSTTVEAFLFFRILQAAVATC MVLGRAIVRDIVPDAQAASMIGYVTMGMALVPMVGPMIGGALEQAFDWHATFVFLVLA GIGTLALVYYDLGETLAKGGMGFRAQVRSYPELFRSPRFWGYVMCAAFASGAFFALLG GASFVGTTIFGLSPVWNGIALGAPAVGYAMGNFLSGRFSVRLGINKMALIGTGITIAG LGTSVLLTLAGLIHPLVFFGFCSFLGLGNGLILPNVMAGSISVRPHLAGTASGLGGAI MIGGGAALSQVAGSILTVESGTLPLQLIMLGTSMMAFLSVVFVVWREKQTA" gene 311980..313503 /locus_tag="SKA53_01656" CDS 311980..313503 /locus_tag="SKA53_01656" /note="COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)" /codon_start=1 /transl_table=11 /product="propionyl-CoA carboxylase, beta subunit" /db_xref="CDD:13933" /translation="MDILQELEDRRVDARLGGGEKRIAAQHAKGKLTARERIDLLLDE GSFEEFDMFVAHRCTDFGMEQDRPAGDGVVTGWGTINGRMVYVFSQDFTVMGGSVSET HGKKICKIMDLAMQNGAPVIGINDSGGARIQEGVASLAAYGDVFQRNITASGVVPQIS LIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVAKTVTNEIVTAEELGGASTHTR KSSVADGAFENDVEALAETRRLFDFLPLNNREQPPVRPFFDDVNRIEDSLDTLVPANP NTPYDMKELILKIADEGDFYEIQAEFAKNILTGFIRLEGSTVGVVANQPMVLAGCLDI DSSRKAARFVRFCDAFEIPVLTLVDVPGFLPGTSQEYGGVIKHGAKLLYAYGEATVPK VTVITRKAYGGAYVVMASKHLQADFNYAWPTSEIAVMGAKGATEIIHRGKSPEEIAAR TAEYEARFANPFVAAEKGFIDEVIMPHSTRKRICRAFASLRSKKTQMPWKKHDNIPL" gene 313520..313888 /locus_tag="SKA53_01661" CDS 313520..313888 /locus_tag="SKA53_01661" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MALPYMDKHRGFPGRLPGTDFQFVLRRANKDGATPLSQRIRYPD RRPADKRADAGFMQALWEAFGEDPFVRGNLDAGRLSWLFGREVIPAEDPFDPASYEAM LRIDVKVARQSFPDIPGLNE" gene 314214..314426 /locus_tag="SKA53_01666" CDS 314214..314426 /locus_tag="SKA53_01666" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQKKSIILAAFAAFALSGCLESDTERAVAGAGAGLVASELLGTD RAGTILAGAAAGVFCDDVGVCRPVRR" gene 314517..316514 /locus_tag="SKA53_01671" CDS 314517..316514 /locus_tag="SKA53_01671" /note="COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit" /codon_start=1 /transl_table=11 /product="propionyl-CoA carboxylase, alpha subunit" /db_xref="CDD:13908" /translation="MFKKILIANRGEIACRVIKTARKMGIQTVAIYSDADRHALHVKM ADEAVHIGPAPANQSYIVIDKVMAAIKATGAEAVHPGYGFLSENAKFAEALEAAGVAF IGPPKGAILAMGDKITSKKLAQEANVSTVPGYMGLIADADEAVKISNQVGYPVMIKAS AGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLADQH GNAVYLHERECSIQRRNQKVIEEAPSPFLDEATRKAMGEQSVALAQAVGYTSAGTVEF IVDGDRNFYFLEMNTRLQVEHPVTELITGIDLVEQMIRVAAGEHLPFVQSDLKINGWA MESRLYAEDPYRGFLPSIGRLTRYRPPVEEATPTRAVRNDTGVFEGGEISMFYDPMIA KLCTWGPDRASAIAEMRLALDAFEVEGIGHNLPFLAAVYDHEKFTSGTMTTAFIAEEF PDGFNGTTLPDDTCLQIAASAAAMHRVSEIRRARISGRMGNHERHVGEDWVVSMQGAH HRVHIAADKKGADVTIGANTMRVTSDWTPGQPLARLDVDGAPLVLKIGKISGGFRVRY RGADLKVHVRSPRQAELAALMPEKLPPDTSKVLLCPMPGLIVKIDVAVGDVVQEGQAL CTVEAMKMENILRAERKGVVAKINASAGDSLAVDDVIMAFE" gene complement(316519..316986) /locus_tag="SKA53_01676" CDS complement(316519..316986) /locus_tag="SKA53_01676" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKRLFFIALAALVAATSLPAAEPSVIARWQSDRTQVFDASEVSL PELQWIARAVVVFADSPNDPMFRQQMDLLLAEIDRLVERDVMLITDTDPAARNSVRLD LRPRGYALTVVGKDGRVLQRKPEPWSVRELTGSIDRTLLRQQEIEDRRGANIR" gene 317089..319215 /locus_tag="SKA53_01681" CDS 317089..319215 /locus_tag="SKA53_01681" /EC_number="5.4.99.2" /note="COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit" /codon_start=1 /transl_table=11 /product="methylmalonyl-CoA mutase" /db_xref="CDD:25799" /translation="MTDKKTWEKLATGELRGKPLDALTWHTLEGIPVQPLYTAEDTAD LPHLGGIPGQAPYTRGVKATMYAGRPWTIRQYAGFSTAEESNNFYRKALAAGQQGVSV AFDLATHRGYDSDHPRVEGDVGKAGVAIDSVEDMKILFDGIPLDKVSVSMTMNGAVIP ILANFIVAGEEQGHPRNVLSGTIQNDILKEFMVRNTYVYPPEPSMRIIADIIEYTTAE MPKFNSISISGYHMQEAGANLVQELAYTLADGREYVRAAIARGMDVDQFAGRLSFFFA IGMNFFMEVAKLRAARLLWSRIMAEFDPKDPKSSMLRTHCQTSGVSLQEQDPYNNVIR TAYEAMSAVLGGTQSLHTNALDEAIALPTEFSARIARNTQLILQEETGVTKVVDPLAG SYYVESLTHDLAEKAWELIEEVEQMGGMTKAVASGMPKLRIEETAAKRQAAIDRGTEV VVGVNKYRKDNEDPIDILDIDNEAVRLSQIARIDRTKAARDAAACEAALAELTRRAGD GGNLLEAAVVAARARATVGEISMAMEKVFGRHRAEVKTLAGVYGAAYEGDAGFAAIQA SVEAFAKEDGRRPRMLVVKMGQDGHDRGAKVIATAFADIGFDVDVGPLFQTPAEAAQD AIDNDVHVIGISSQAAGHKTLAPKLVQALKDAGADDIIVICGGVIPQQDYQFLYDSGV KAIFGPGTNIPKAAEDILHLIRAARG" gene 319281..319892 /locus_tag="SKA53_01686" CDS 319281..319892 /locus_tag="SKA53_01686" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLTLDHLAVVAEDLAAGTAWVEAALGVTMQPGGRHVRYGTHNTL LGLGDDLYLEVITKDPDAAPYDGPTWFGLDDFTGAPRLGNWICQTDDLDAMLCDAPSA VGVPRDLSRGDLAWRITVPDDGSKPYDGAYPTLIQWAQGTHHPARRLADSGCRLLQLS VTHPQADDLRAMLPLDDDRVVLRVGPAGFRAVFDTPQGRRSLG" gene 319911..320663 /locus_tag="SKA53_01691" CDS 319911..320663 /locus_tag="SKA53_01691" /note="COG1076 DnaJ-domain-containing proteins 1" /codon_start=1 /transl_table=11 /product="Putative heat shock protein DnaJ" /db_xref="CDD:10799" /translation="MQRKVATCAQVGFKIGHRFDQRTLMSIWTRIGEALAALANGEGL LAVFDRLRTPPDRSVAFTIAVIALGAKMAKADGLVTRTEVRAFREVFVIGPEEEDNAA RVFDLARQDVAGYDIYARRIKAMFGEHEGPLCDLLEGLFHIALADGSYHATEDAFLQE VAAIFGFDERRFQRIRAQFVPDAQRDPYAVLGVDPDAPMDRVRAAWGQLVRETHPDQM IARGVPPEAVKLAERRMVAINRAWEDIRAQRA" gene complement(320683..322230) /locus_tag="SKA53_01696" CDS complement(320683..322230) /locus_tag="SKA53_01696" /note="COG0248 Exopolyphosphatase" /codon_start=1 /transl_table=11 /product="phosphatase, Ppx/GppA family" /db_xref="CDD:10123" /translation="MNQQSEPDSIDWGPFGRPLFEDPAAQALARVGVVDVGSNSVRLV VFDGAARSPAYFYNEKIMCALGAGMSQTGHLNPEGRKRAVSAIRRFAALAKGMGIPPL TAVATAAVREATDGQDFRDEVLRETGVKLWVIDGREEARLSAQGVLLGWPGSYGLVCD IGGSSMELADLAEGKVGQRLTSALGPLKLREIKGGKKAIKAYVRATVQDLHRDMNFET GMRLFLVGGSWRAIARIDMERRSYPLTVLHEYRMSSRQISMTAEYIRTSDLTELRGRC HISDSRMSLVPLAAIVLKELMRTFKPKDVAVSSYGIREGMLYEQMPRALRERDPLIEA CRFAENKDARLPGFGRILYDFVKPLFPRANWQRKRIIKAACLLHDVSWRAHPDYRAEV TFDNATRANLGGLKHYERVLLGLALMNRYSSKTTSPRFDPLFAMLTPEQIKEAEILGK AMRLGAMLWLTADEQPGTLTWHRKAGALTLRLTEHARPLYGEVAEVRFNALANALNAT GTVKFGG" gene complement(322265..324433) /locus_tag="SKA53_01701" CDS complement(322265..324433) /locus_tag="SKA53_01701" /EC_number="2.7.4.1" /note="COG0855 Polyphosphate kinase" /codon_start=1 /transl_table=11 /product="polyphosphate kinase" /db_xref="CDD:4759" /translation="MNKANFLSSDFPAATALDMDVASSARFVNRELSWVGFNWRVLEE AENPRVPLLERLRFLSISATNLDEFYTVRVAGLRELAIAGNVTPALDGLTPAEQLVEI DREARALMTRQQVVYSALEAEMKDNGIAILSRMDVTKDDRDFLDNYFLDQVFPVLSPL AIDPAHPFPFLPNEGFALALQLERSADKRSLRALLPIPAQIARFISLPSATGHRFLPL EELLLLHIPRLFPGYQVKGNCGFKVLRDSDLELEEEAEDLVREFETALKRRRRGEVVR LKISANAPPALQTLIMSELHVSSDAVVEVDGLIGISDLGELVLDSRPDLLWPSFTPRV PERVQDHDGDMFAAIRQKDMLLHHPYETFDMVVRFLNQAAHDPDVVAIKQTLYRTSQK SPIVSALCEAAENGKSVTALVELKARFDEAANIRQSRRLERAGAHVVYGFVNYKTHAK ISTVVRREGDKLVTYTHFGTGNYHPITARIYTDLSFFTCDQDLGRDATKVFNYLSGYA QPEGLQNLSISPISLKQTLIDRIAAEGVNARAGKPAMIWAKMNSLVEPDVIDALYAAS QAGVKISLVIRGICGLRPGVKGLSDNIRVKSIVGRFLEHSRIVCFGNGAALPSKQAKV YISSADWMGRNLNRRVETLVDIRNPTVKAQIVSQIMAANMADVAQSWVMAPDGSFTRA TPTEGEFAFNCHRFFMENPSLSGRGSAGASDVPQLTHTDD" gene complement(324484..325146) /locus_tag="SKA53_01706" CDS complement(324484..325146) /locus_tag="SKA53_01706" /note="COG0593 ATPase involved in DNA replication initiation" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10463" /translation="MIARQLSFDWPNGVALGPDDFFVSTANATAFGMVTDPARWPLCK LVITGPAGCGKSHLARIFAAGQPTQIIAAADLTADFRPKAAALVVEDMDTLPSAAQEA MFHLHNHLHNNGGLLLLTARQTPRHWPITLPDLASRMQGSAVVQVADPDDALLQAVMM KLFADRQLLPPPDLAAYLAPRIERSFAAAAAIVAELDSMALATGHKISQRLAARLLDK PD" gene complement(325143..326246) /locus_tag="SKA53_01711" CDS complement(325143..326246) /locus_tag="SKA53_01711" /note="COG0628 Predicted permease" /codon_start=1 /transl_table=11 /product="Lipocalin-related protein and Bos/Can/Equ allergen" /db_xref="CDD:10498" /translation="MALPVKDQIKYWGIAMAVFLVVLWALGDVILPFVLGGAIAYLLD PVADRLQRAGLSRVLAVSIITLVAALVFILLILLVIPTLVKQTTALINTAPALFERLQ AGLTARFPDLIEPESTIRQQLQAIGETIQARGGELINGVLSSAMGLVNIIVLLVIVPV VAFYLLLDWDNMIAKIDSLLPRDHVATVRHLGSEIDRTLASFIRGQGTVCLILGTYYA LGLMLAGLNFGLIVGFIAGLITFIPYVGALVGGALALGLALFQFWGAVELADGDTVTY ATNWLRIGIVGAIFALGQFLEGNVLTPKLVGSSVGLHPVWLIFALSVFGSLFGFVGML VAVPVAAVIGVLIRYGLGQYRDSLLYQGQSKGR" gene 326405..327745 /locus_tag="SKA53_01716" CDS 326405..327745 /locus_tag="SKA53_01716" /EC_number="6.1.1.15" /note="COG0442 Prolyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="prolyl-tRNA synthetase" /db_xref="CDD:10316" /translation="MRLSRYFLPVLKETPREAQIVSHRYMLQAGMIKQASAGIYSWLP LGFKVLRKIENIVHQEQERAGHIAIQMPTIQSADLWRESGRYDAYGEEMLRIKDRGGR EMLFTPTAEELVTDIFRAHVTSYKDLPLTLYQIQWKFRDEVRPRFGVMRGREFYMKDG YNFDLTKEDALHAYNRHLVSYLRTYERMGLQAIPMRADSGPIGGDDTHEFLVLADTGE SEVFYDSQITDLKFGDRQIDYSDHAACAAVLDEFTSRYARTDETHDAALFNQVPEERR RTARGIEVGQIFYFGTKYSDAMGALVDDGKGGKVPVHMGSHGIGVSRLLGAIIEASHD DKGIIWPEGVTPFHCGIVNLKQGDAEADAACQALYDSLTALGLEPLYDDRDERAGTKF GTMDMIGLPWRITVGPRGLKNGVVELTSRRTGESEELPPADAIARIAAIYQGIA" gene 327848..328036 /locus_tag="SKA53_01721" CDS 327848..328036 /locus_tag="SKA53_01721" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLIWIALAIWIIWKVFVIVGDMAERRGQDRFLWQVTAVFINPIS AMLLLWIFCRVKPGWHNR" gene 328089..329345 /locus_tag="SKA53_01726" CDS 328089..329345 /locus_tag="SKA53_01726" /note="COG4591 ABC-type transport system, involved in lipoprotein release, permease component" /codon_start=1 /transl_table=11 /product="lipoprotein releasing system transmembrane protein LolE" /db_xref="CDD:13754" /translation="MTTTRPFAKFEWMIAWRYIRAKRAEGGVSVMTWISLIGVTLAVF ALIATLAVRSGFRAEFIDTIVGADAHVTVLRPREVIADYADMSDRIMALPGVASVAPL VRGQAMAGAFGQIALADIYGIHLDDLKASEAIVDSERTIGNIDDLQGGIALGSALAAN LGLGLGDRIEITTRSGAATPMGQSTRRNAFDVVYIFSTGRYQIDEVRAYLPFDVAQTI FNRDGVADELDVRLDDINKSEALKQDIANAAGPNIWAYSWQDRVGRFLRALTIEDNVM FIILSILVLVASMNIISGLIMLVKNKGRDVGILRTMGLTEGSILRIFFICGAGIGTIG TALGVILGCLFAIYIDQIFSLVNYVAGGGVWDPSIRGIYNVPAELHVSDVLKAVSLSL GLSWIITIFPARRAARMNPVEALRYE" gene 329338..330018 /locus_tag="SKA53_01731" CDS 329338..330018 /locus_tag="SKA53_01731" /note="COG1136 ABC-type antimicrobial peptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC lipoprotein efflux transporter, ATPase subunit, LolD" /db_xref="CDD:10856" /translation="MNDILSLHDLHKTYNAGKPNEVRVLQGVNLTVAAGEIVALVAPS GAGKSTLLHIAGLLDTPDSGTVSIAGTDMTRLSDRKRTGVRRGQVGFIYQFHHLLPEF SALENIVLPQLANGVTDRAAHARAMALLTRVGIAERAAHRPAALSGGEQQRVAFCRAL ANEPALLLADEPTGNLDPDTSNRVFETLIGLVRDTGLAAVIATHNLELAARMDRQLRL DAGVLVAL" gene complement(330015..330449) /locus_tag="SKA53_01736" CDS complement(330015..330449) /locus_tag="SKA53_01736" /note="COG3238 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12575" /translation="MFHYALIMLVAGLGIPVLAALNAGLGRQIGSPAMAATVLFVVAF SVALIAALLTQPQAATRLASAPKYLFLAGTLVAFYILSITWIAPVIGVGNAVFFVLLG QLISAAAIDHFGLFAAQVTPLTGTRAAGIALMAAGVLLTQKV" gene 330544..330930 /locus_tag="SKA53_01741" CDS 330544..330930 /locus_tag="SKA53_01741" /note="COG2010 Cytochrome c, mono- and diheme variants" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12594" /translation="MRIIILGAFLALAACGDEQPIDGRSVYLDNCAACHGADGTGNGP MARDLGVTAPDLTQISARNGGTFPRDAVMSTIDGYQAGQHLSGAMPEFGAGDLGDTVI VENDGLGTPVPWKLLVLTDYLESLQR" gene complement(330959..331675) /locus_tag="SKA53_01746" CDS complement(330959..331675) /locus_tag="SKA53_01746" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26816" /translation="MRHLILALFLASPALAQQIETDLELVLLADASGSIDADELLFQR QSYATAITDPAVVMAIQNTLYGSIAVTYVEWASNQATVVDWTIIADMDSATAFADALI GPPRQASGSNAIGAALLYGMDQIEGNDITGLRRVIDFSGDTMANTLGPAITTSRDRVV AAGITINALPILRNNDFRSNSGLVNLYKQNIIGGPNAFVMPAMDGPAFTDAIRRKLIL EIAGTVPNTAIATALLQQIP" gene complement(331763..333721) /locus_tag="SKA53_01751" CDS complement(331763..333721) /locus_tag="SKA53_01751" /note="COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit" /codon_start=1 /transl_table=11 /product="DNA topoisomerase IV subunit B" /db_xref="CDD:10062" /translation="MADDLLSTTGPDDYNASSIEVLEGLEPVRKRPGMYIGGTDERAL HHLVAEVLDNSMDEAVAGHANRIEVELHADHSVTIRDNGRGIPVDPHPKFPDKSALEV ILCTLHAGGKFSGKAYQTSGGLHGVGASVVNALSDSMVVQVARNKELFEQRFSRGLPL GPIQKLGPTQNRRGTTVTFHADEQIFGSQKFKPARLYKSIQSKAYLFSGVEIRWKTEI NDGETPLEATFHFPGGLADYLKETLGKSATYADKPFAGSVDFADKFNEPGKVEWAINW TPVRDGFIQSYCNTVPTPEGGTHVAGFWNAILKGIKGYGELANNKKAALITREDLMSG GCALVSCFIREPAFVGQTKDRLSSEIAARMTEGAVRDHFDNWLAADTKSAGAILDFLV LRAEERLKRRQEKETARKSATKKLRLPGKLTDCTSKDRKGTELFIVEGDSAGGSGKGA RNRVNQALLPLKGKILNVLGAASNKLTTNQEINDLCEALGVGMGTKFNVDDLRYEKII IMTDADVDGAHIASLLMTFFFTQMRPLIDHGHLYLACPPLYRLTQGARRVYVADDAEK EKMMAKGLGGKGKIDVQRFKGLGEMDAKDLKETTMDPATRKLIRVTVHDDVPGDTADL VERLMGKKPELRFQYIQENARFVEELDV" gene 333773..334507 /locus_tag="SKA53_01756" CDS 333773..334507 /locus_tag="SKA53_01756" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKDPADGVCLALGAVAGFAQTGGTMTDNLTTIKALPDWRYLLAE FYELYRAIPAGGSDRIRSHQRQVREAINRVIKAHAPVQLQPAAQKPVTAHLRRALDQG RSGIMASTIRALDTLRTDLSWQYGYEKVPSALADSYAYAEIAGPNGPVVTSEIILGVV LFAPSCTYPAHAHQGITESYVCLSGAVSENHQGVYVPGSMIFNPPDHLHRITVGDREP ALLAYAWLGKPADLAGQKMVFSRPRK" gene 334540..335424 /locus_tag="SKA53_01761" CDS 334540..335424 /locus_tag="SKA53_01761" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="probable UDP-glucose 4-epimerase" /db_xref="CDD:10325" /translation="MRIFFTGGSGKAGKHAIAYLQAQGHIVVNIDLVPSGLDVSELLV DLTDAGQVIGAMSQYTDFHELDTGTGVPRFDAVVHFAAVPRVMIGTDAECFRINTQST YNVIEAAVKLGVPKVIFASSETTYGVCFAHGEVKPDYVPVDEDHPTVPHDSYAMSKVC NEATARSFQVRTGIDIYGLRINNVIEPHEYATNFPAFIADPAARRRNIFAYIDARDLG QMVDCCLKTDGLGYQVFNVSNDDLSVGITARQVIARFYQGVEQRGTLSENETMYSNAK AKRMVGFAPQHSWRDVLG" gene 335568..336215 /locus_tag="SKA53_01766" CDS 335568..336215 /locus_tag="SKA53_01766" /note="COG3683 ABC-type uncharacterized transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25099" /translation="MLRKLSVFPLLLPAPALAHPHVFVQVEMAVVFDVQGGVGVRLDW VYDAYFSMLVTADLGIDMDGDLQLTPEEQALLDTQIAAWPADFDGDLEVVQGDTILPL APKRDHAMVYADGIMRETHLRPLAQVADRSAPLTILPYDPTYYVAYSLAGPVTVEGRG DCTVDIIPANLDAAYSLVDELLYGRPASDVGPDEDFPEVGRSFADSVVVTCAGLL" gene 336197..337081 /locus_tag="SKA53_01771" CDS 336197..337081 /locus_tag="SKA53_01771" /note="COG2215 ABC-type uncharacterized transport system, permease component" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:11922" /translation="MRRFAVILLAVIGAGAVWLWGFGGAEQIMRQAAASQMQVQNAMA GALRALQQGDLAAVLTLWGLCFAYGFVHAAGPGHGKLVIGGYGLGARVPVGRLAGLAL ASSLAQAATAVVLVYGAVWALGWGRAQMTGLADDVLEPVSYALIAGVGLWLVLRGARH LRGLRRPVQAPDDICASCGHAHGPSVEQAAEVRSWRDAAAIIAAIAVRPCTGAVFLLI LTWRFGLDWAGIIGAFVMGLGTASITVLVAFAAVGFRETALQLVSNRGTARMMASAEI AAGALVMLLALQLVQRSI" gene 337124..337291 /locus_tag="SKA53_01776" CDS 337124..337291 /locus_tag="SKA53_01776" /note="COG0534 Na+-driven multidrug efflux pump" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /db_xref="CDD:10405" /translation="MQQIATTYPEHARAIWKLGIPLILSNMAQFAIHMTDTLMLGWYD VTALAAATIAT" gene 337292..338488 /locus_tag="SKA53_01781" CDS 337292..338488 /locus_tag="SKA53_01781" /note="COG0534 Na+-driven multidrug efflux pump" /codon_start=1 /transl_table=11 /product="MATE efflux family protein" /db_xref="CDD:10405" /translation="MFFVVFIVGAGFAQAITPLVAAANEQNDQVQVRRVTRMGLWLSI LYGVIVMLPFFWAEDILIAIGQAPIVAAEAHLYLQIVIWGMIPTLLVMALKSFLVALE HTAFILWATVGTAVLNGLVNYALIFGNWGAPELGIEGAAIASVMVNLLSVALLVGYIR RKLPRYELFRNFHRPDSEIMRRVYLLGWPIGLTSLAEGGLFSASAIMMGWIGPIELAA HGIAIQLASLTFMVHIGFSQAATVRAGRALGRRDEQGLRRGGITAIGLSAIYAAVTSA IFLLIPGLLVSVFIDPAEPDRLRLIEIGVLLVMIAGLFQLVDGLQVVVLGLLRGVQDT TVPMVMAAFSYWGVGLPASYLLAFHWGLGGVGIWLGLVLGLLVAAMLLMSRFWGRSVR ITPAQG" gene complement(338485..339249) /locus_tag="SKA53_01786" CDS complement(338485..339249) /locus_tag="SKA53_01786" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPSRSNAAPAHPALHHADAALRPESEAGRSRLNRKYTITCLAGV HIIETSIMAPAIPAIEDAFGALGRGTILQTRHGPVAVEDLLPGDSLRLIDGSFAPLLW RGMMTITPSDAGSVRHGLTRITADALGIGRPLQDLVLGPAARLYHATSNVAKLTGKTA AYIPAHDFVDGNQFIALRPAAPVDVYQLGFAAHETLMVNGIGVESLHPGTAFSLGLRG PVLAQYLALFPHLRRLDDIGLFRHPRLRLRDLEMRA" gene complement(339657..340412) /locus_tag="SKA53_01791" CDS complement(339657..340412) /locus_tag="SKA53_01791" /note="COG1496 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11210" /translation="MTLEIITDTALGATRHGFFTRKGGASSGVFSGLNCGFGSSDQSD IVAINRDRVAGALDLTADRLVGVHQVHSADVVTVTTAGPLVQKADALVTRTKGIALSV LTADCQPVLFCDAQAGVIGAAHAGWKGALAGVLEQTVHAMEQLGAARRNITAVIGPAI SQRNYEVGGDFRDRFVAADPGYERFFAAGAQGRFQFDLPGFGLMRLRACGIGQAHWTR HCTYADPLRFFSYRRSVHLQEADYGRLIAAIRL" gene complement(340409..341467) /locus_tag="SKA53_01796" CDS complement(340409..341467) /locus_tag="SKA53_01796" /note="COG1565 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:17183" /translation="MTTLADLLLTRIARDGPISIASFMTDALMHPAHGYYATRDPFGA AGDFITAPEISQMFGELIGLSLAQAWLDQGAPDPVTLAELGPGRGTLMADILRATAAV PGFHAAVTVHFVETSPHLRALQAERVPQATWHDRIDTLPDAPLLLVANEFFDALPIRQ FVRAGAGWRERMVGAQDGTLCFGLSDAAALAVLTPRLDDTQDGDLVEHCPALPGIVAA IAGRIATNGGAALVIDYGDWQSLGDTFQALAGHAPTDPLAAPGAADLTAHVDFAAIAA HAAPARHSRLTPQGVFLERLGITARALKLASGLTGEALDAHVAAHRRLTHPAEMGDLF KVMALYPATAMPPPGLDP" gene complement(341464..342345) /locus_tag="SKA53_01801" CDS complement(341464..342345) /locus_tag="SKA53_01801" /note="COG0682 Prolipoprotein diacylglyceryltransferase" /codon_start=1 /transl_table=11 /product="prolipoprotein diacylglyceryl transferase" /db_xref="CDD:24591" /translation="MFAAIPFPDISPEIFSIDLFGMTLALRWYAMGYIVGIALGWMLI KAALRRPHLWRNGAPMDPARLEDLLTYIVLGVIGGGRLGYVFLYQPAAFLADPVSIIR IWEGGLSFHGGFAGVVIAVWLFSRRQSVPLPDLADIIAVAATPAILLVRIANFINAEL WGRPTNVPWGVIFPGDAAQSCATATAPCVRHPSQLYEAGLEGLVLGAVLLLLAFRFGG LKKPWLLSGLFFAGYGMSRFIVEFVRQPDAQFVSLGNPLGWAVQFGDYGLTMGQVLTL PMIVIGLVVILATLRRR" gene 342448..342696 /locus_tag="SKA53_01806" CDS 342448..342696 /locus_tag="SKA53_01806" /note="COG2960 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15678" /translation="MQNRNKIFDDLSQLMTNAMGVAQGARDEAQTAMKSMMDRWLADR DFVTREEFDAVRAMAQKAREENEALSARIAALEAKKTK" gene complement(342830..343990) /locus_tag="SKA53_01811" CDS complement(342830..343990) /locus_tag="SKA53_01811" /note="COG1363 Cellulase M and related proteins" /codon_start=1 /transl_table=11 /product="endoglucanase" /db_xref="CDD:11079" /translation="MWQDWPPVKQFLGDNPAVTNISRSTIAKQRHTAQIAIIKGACRM NLDLLKRLCETPGVPGHEHRVRDLITSEIKGMFDAVTTDPMGSLLCRRDAKKKDAPRI MLLCHMDEIGFLVSHISKDGFLYLQPVGGFDPRNLFSRRVLVCTDQGDFKGVMNPGGK PIHISSAEDRKKVPEVTEFFVDLGMGKAACDKVKIGDFVVMDEPFIEMGNKVVSKALD NRIACWLGIEAIRALAKKGRGAEIHVAFTCQEEVGLRGARTAAYAIKPDIGLGIDVTL ACDTPGIPEKDATTTQGAGFGLHVRDSSFIADKALVAQIEALAIRKKIPYQRTMLAAG GQDGAAAQQAAAGARAVGIVVGTRYIHTVTEMIDKGDLQAALDILVAYLSEF" gene 344093..344596 /locus_tag="SKA53_01816" CDS 344093..344596 /locus_tag="SKA53_01816" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14549" /translation="MALSEHYFEADDLHPIDLVEHIAETHDWEFDRIHDDQIAMAVEG QWRTYSITLAWSAYDETLRLICTFEMDPPAARKPALYEALNAINDRLWAGSLTWWDEQ NLMVYRYGLVLAGDQVAGPDQIDTMIGAAVNACEQYYPAIQLVTWAEQTPKQALEIAI AGAYGRA" gene 344672..345487 /locus_tag="SKA53_01821" CDS 344672..345487 /locus_tag="SKA53_01821" /EC_number="1.5.1.2" /note="COG0345 Pyrroline-5-carboxylate reductase" /codon_start=1 /transl_table=11 /product="pyrroline-5-carboxylate reductase" /db_xref="CDD:10219" /translation="MNMNEVAVRGLVLLGCGKMGSAMLAGWLRNGLPAASVWVIDPHP SDWLKQQGVHIGGTLPESPAIAVIAVKPQMMMTALPDVKSFGTGKTLIISIAAGTPIA TFEAVFGKDTPIIRAMPNTPAAIGRGITALIGNAKTADADLDLAEALLWAVGQTVRLE DESQMDAVTALSGSGPAYVFHMIEALAAAGVAQGLTPQMAMDLAKATVGGAGELAETA DEDPAQLRINVTSPNGTTQAALDVLMDKDKGLTDLMHRAVAAAANRARELASE" gene 345480..345818 /locus_tag="SKA53_01826" CDS 345480..345818 /locus_tag="SKA53_01826" /note="COG0073 EMAP domain" /codon_start=1 /transl_table=11 /product="chaperonin csaA" /db_xref="CDD:9948" /translation="MSEISFDDFLKVDVRVGIVTRAEPFPEARKPAIKLWIDFGPDIG EKKTSAQITVHYASETLVGKQVLAVVNFPPRQIGKFMSEVLVLGMPDAEGAIVLVGPD QDVPLGGRLH" gene 345815..346768 /locus_tag="SKA53_01831" CDS 345815..346768 /locus_tag="SKA53_01831" /note="COG1052 Lactate dehydrogenase and related dehydrogenases" /codon_start=1 /transl_table=11 /product="D-isomer specific 2-hydroxyacid dehydrogenase family protein" /db_xref="CDD:10777" /translation="MKKLLITRALPEATLAAARARFDVTLRPQTAGLTVAEAAAALRD YDAILPTLGDGFAAAAFTGEIRCGVLANFGVGYNHIDVAAARAAGVAVSNTPDAVTDA TADIGMTLILSACRRAGEGERLVRAGKWTGWQPTQMLGTHVTGKTVGIVGMGRIGQAV ARRCLYGFNMPVLYFNRSPKMVDMPARQVDSLHDLMGRADIIVVTVPGGGSNTGLIDA AALAAMKPTGIFVNIARGDVVDEDALIAALQKRQIAGAGLDVFAKEPIVPDALRALEN VVILPHLGTAALEVREAMGQMALDNVIAWDEGRALPQGLTS" gene complement(346904..348106) /locus_tag="SKA53_01836" CDS complement(346904..348106) /locus_tag="SKA53_01836" /EC_number="2.6.1.1" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aspartate aminotransferase" /db_xref="CDD:10310" /translation="MAFLSATLDRVKPSPTIAVTTKAAELKAAGRDIIGLGAGEPDFD TPDNIKAAAVAAIAAGKTKYTAVDGIPELKQAICAKFKRDNALDYTPAQVTVGTGGKQ VLYNAFMATLNAGDEVIIPAPYWVSYPDMVLLAGGTPVTIEATLAADFKITADQLEAA ITPATKWFLFNSPSNPTGAGYSWDELKALTDVLLRHPHVWVMTDDMYEHLAYGNFKFC TPAQVEPRLYDRTLTVNGVSKAYAMTGWRIGYAAGPEMLIKAMRKVQSQSTSNPCSVS QYAAVEALNGTQDFLAPNNALFERRRDLVVDMLNQAPGVVCPRPEGAFYVYPSIAGCI GKTSAAGVLIDNDETFAAALLEETGVAVVFGAAFGLSPNFRVSYATSDAALEEACKRI VGFCKSLN" gene 348187..348579 /locus_tag="SKA53_01841" CDS 348187..348579 /locus_tag="SKA53_01841" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family" /db_xref="CDD:16530" /translation="MTETDSDWYSPEAATFGDRLAGAREAAGLSQKDLAKSLGVKFAT LVSWENDTGEPRANRLQMLAGMLGVSLGWLMTGLGDGLAAPDDATEIPANVAVLMQEM RRLRAQMVQTLDKMGQVEKQLQTALRRT" gene 348576..348860 /locus_tag="SKA53_01846" CDS 348576..348860 /locus_tag="SKA53_01846" /note="COG2938 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="TPR repeat family protein" /db_xref="CDD:12286" /translation="MMTETTEHTRKRLHMRSMRRGIKEMDLILPAFAAEHLADMDEAE LALYDALLSENDHDLYGWVGGQFAVPDVYADMISRIAAGAHGVTRPAAAH" gene 348918..349439 /locus_tag="SKA53_01851" CDS 348918..349439 /locus_tag="SKA53_01851" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /db_xref="CDD:24258" /translation="MSVHTNLGKQDKSGLTDARSASFMASYLDVLTLVERLHRLLLDV IKDEFERVGILEINAVQALLLFNIAENEVTAGELKSRGYYQGSNVSYNLKKLVELGYM HHQRSEIDRRSVRVRLTEKGRNVRLIVAKLFATHADGLLDRQVLDHAGLDEISSALRR VERYWSDQIRYIY" gene complement(349462..350028) /locus_tag="SKA53_01856" CDS complement(349462..350028) /locus_tag="SKA53_01856" /note="COG0346 Lactoylglutathione lyase and related lyases" /codon_start=1 /transl_table=11 /product="probable lactoylglutathione lyase" /db_xref="CDD:25648" /translation="MALLAAACAGYPARGCGTYRLFDRFGCFAPCPAALGWREDDRRI ATMTLTYLHTMVRVKDLEASMAFYALLGLRETRRIDNDKGRFSLVFMAPPGQEDCPVE LTYNWDGDAGLPSDSRHFGHLAYRTSDIYALCQHLMDNGVTINRPPRDGHMAFVRSPD NISIELLQEGDNLPPAEPWASMDNTGHW" gene complement(350219..351979) /locus_tag="SKA53_01861" CDS complement(350219..351979) /locus_tag="SKA53_01861" /note="COG0608 Single-stranded DNA-specific exonuclease" /codon_start=1 /transl_table=11 /product="probable single-stranded DNA-specific exonuclease" /db_xref="CDD:10478" /translation="MNIPQDHAFLGVAASLTGRRWVGPNAQEDRAAEAMVQATNLPPA LCRTLARRGVPSQEAALFLAPTLRDLLPDPRSLRDMEKAATRFLQAVAGRERIAVFAD YDVDGGASAALLIVWLRQRGLRATLYIPDRIDEGYGPNEPAMAELAAAHDLIICVDCG TLSHGPIAAAVRADVIVLDHHLGGETLPAAYAVVNPNRQDESGDLAHLCAAGVVFLML VEANRQLRDAGKAGPDLMAMLDLVALATVADVAPLVGVNRAFVRQGLVVMARRARVGL TALADVSGLDAAPTAYHLGFLLGPRVNAGGRIGKADLGARLLASDDPAEARDLADMLD QLNTDRRAVEQAVRDVAIAQALARGTDGPLVWAAGEGWHPGVVGIVAARLKEATNRPA VVIGLEDGIGKGSGRSVSGIDLGAAIQRLASEGLLLKGGGHKMAAGLSVAQDRLEPAM ARLAELLDKQGASALGPADLRLDGILMPGAATVDLVTLLDDAGPFGAGAPAPRFAFPD CQILFAKQVGETHLKISFGDGLGARIDAICFGAMDGPLGPALLQHNGTRFHLAGRIEV NVWQGRQSVQLRLEDAAPAH" gene complement(352070..353035) /locus_tag="SKA53_01866" CDS complement(352070..353035) /locus_tag="SKA53_01866" /note="COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphatase, class II" /db_xref="CDD:27899" /translation="MPSPADFNDRNLSLGLARVSEAAAIACASLIGRGDEKAADQAAV DAMRNQLNKLDIAGVVVIGEGERDEAPMLFIGEEVGTGNGPGVDIALDPLEGTTLTAK DMPNALAVIAMGPRGSMLHAPDVYMDKLAIGPGFRTGVVTLDMSPAERVSALAAAKGC STKDITVCVLERPRHEDMIAEIRATGAAIRLITDGDVAGVMHCAEPDITGIDMYMGSG GAPEGVLAAAALKCMGGQIFGRLLFRNDDERARATKAGITNFDRVYTRDDLVTGDVIF AATGVTDGSLVPGIKREVGFVTAETILMRSKTGSVRRMIYRNPVR" gene complement(353106..354392) /locus_tag="SKA53_01871" CDS complement(353106..354392) /locus_tag="SKA53_01871" /note="COG0460 Homoserine dehydrogenase" /codon_start=1 /transl_table=11 /product="homoserine dehydrogenase" /db_xref="CDD:10333" /translation="MTHPLRLGIAGLGTVGVGVVRIVQKHADLLQARSGRAISISAVS ARSRDKDRGVDLSGYAWEDDPVALARRDDVDLFIEVMGGHDGPAKEATEAAIAAGKDV VSANKALLAVHGQAIAEAAEAAGRVVRFEAAVAGGIPVVKALTEGLAANDIIRIMGVM NGSCNYILTRMENAGLTYSEVFDEANALGYLEADPELDVGGIDAGHKLALLSAIAFGT QVDFDAVQLEGIGAVSIEDIRQAADMGFKIKLLGVAQMTGRGLEQRMSPCLVPDTSPL GQLQGGTNMIVLEGDSVGQIVLRGPGAGEGPTASAVMGDVMDIARGLRISTFGQPATS LRRARPALAAVPAPYYLRLQLLDKPGALAKVARALGDAGISIDRMRQYGHAEPTAPVL IVTHKTTRTALDEALAAFKDTGVVSGDPVAIRIEAV" gene complement(354447..354677) /locus_tag="SKA53_01876" CDS complement(354447..354677) /locus_tag="SKA53_01876" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRYALPFLLILAACADIPALDGTLSDTARLAPYPRLAPLEDLPA PVMTEADGMENRLAALQRRAATLRAIDPDALQ" gene 354757..355344 /locus_tag="SKA53_01881" CDS 354757..355344 /locus_tag="SKA53_01881" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /db_xref="CDD:7613" /translation="MARKQGSHSDITGPRVQDTALRLIARHGYAAVSMRQIAAEVGVQ AGALYNYTPDKQTLLFDLMRAHMQEVLDALAAADLRGDPPARLDGFTRFHIRFHLPRP DQVFVSYMELRNLAPENFAILESMRRDYETALEDILRDGVAAGVFAVPDTRIATMAII AMLTGLSHWYREGGRLGMDAIEEIYCNLVQKSVRR" gene 355360..355845 /locus_tag="SKA53_01886" CDS 355360..355845 /locus_tag="SKA53_01886" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFNPDHTGGYPTVHASEGRRYFACAVIYGLGGLLIYTAMAHPPD LIWLIFMLGFGAAMLWLGEMMRRATRLGIVLTDADLRDTDGMVLVRIDDIALVDRGAL ALKPANGFTLVLHKRQPPGWSPGMWWRIGKRVGIGGVTAAGPAKFIAEQIALRIKARS G" gene complement(355846..356454) /locus_tag="SKA53_01891" CDS complement(355846..356454) /locus_tag="SKA53_01891" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMTDLIKRLRDNEDGSAAIELVLVTPIITWALLSTLVYFDAFRA ETRSARAGLTIADMFSREASAPVAIGAGYVDAAQALLRTLVEFDPAPTLRVTSYAWDA GANRYVLRWSESRGMGQALTDADLALMTDRLPLLADGATSLLVETSAAYRAPFSLGIA PFTNNTLDPVQMTTFTVISPRFVPAICFDPTPSIPTNGDEIC" gene complement(356451..357026) /locus_tag="SKA53_01896" CDS complement(356451..357026) /locus_tag="SKA53_01896" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTSALRLRDLLRRFSANEDGVVTVEFVIIFPVFMTFFLMTYESG MISLRHFALERAVDVVVRDVRIGAIPNPTRASLRTNICNVARLLPDCENQLQLEMIRR DLRNWVDVPDTVQCIDRGAEVQPVTSFTSGGNNELIFLRVCVRLDPVLPTSLLGRTIV DANADSAAGGSYALVSTTAFVVEPFRNTPGS" gene complement(357023..358480) /locus_tag="SKA53_01901" CDS complement(357023..358480) /locus_tag="SKA53_01901" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14093" /translation="MQNSKLPLTSKAHNPRWRIRYLHAFGRDEDGSVIIMTILLLVTM LIMGGMAVDFMRYEARRATLQSVSDRAVLAAASLNQTLDSRDVVEDYFAKAGFPNALV GAPIVVDNGNSRTVTVRSALDVNTFYLRLAGMDRLTAPARSSATEGVGKVEISLVLDI SGSMRFSNRFVNMQAAAIAFAEEVLDPANGGTVSLTIIPYAGATNPGPEMFAFMGGVR YPDTLLAGDDGILGTEDDYFFPQVSSCVEMVGSDWSSAGLPGAGRAQVPHFQVWDIAR SVMDWGWCPQDRSSIQYAMATPAQARSFINGLRMHDGTGTHYAMKYALATLDPSSQPA FMHLSHPGRGLVPPQFANRPAAWDDPETKKIIVLMTDGDITQQERPRIAQQERDIDYI ISRSINGRDNRGQFVDAATNVGRFEAICTLANQPARSVDVYTVAFEVQPNSAADLQMR NCASDPSMFFRTSGAELIDVFSGIAERITDLRLNL" gene 358787..360274 /locus_tag="SKA53_01906" CDS 358787..360274 /locus_tag="SKA53_01906" /note="COG0334 Glutamate dehydrogenase/leucine dehydrogenase" /codon_start=1 /transl_table=11 /product="glutamate dehydrogenase" /db_xref="CDD:10208" /translation="MRPNRPGAAPGKEGMTMNAHDPAQEPSFRESVDLMFNRAVALMD LSPGLEEKIRVCNATYTVRFGVRLRGALHTFTGYRSVHSEHMEPVKGGIRYAINVHQD EVEALAALMTYKCALVEAPFGGSKGGLRINPADWNEHELELITRRFAYELIKRDLINP AQNVPAPDMGTGEREMAWIADQYRRMNTTDINAAACVTGKPTNAGGIAGRVEATGRGV QYALREFFRYPEDVAKANLSGSLDGKRVIVQGLGNVGYHAAKFLSEEDGALITTIIER DGALHDEAGLHVETVRAWITKNGGLANYPHAKHIPDGASMLEADCDILIPAALEAVIN LSNADRIKAPLIIEAANGPVTAGADEILRDKGCVIIPDMYANAGGVTVSYFEWVKNLS HIRFGRMQRRQEESRHQLVVDELERLSADKGLGWSLSPDFKDKYLRGADELELVRSGL DDTMRSAYQAMRAVWHGRADVHDLRTAAYLVSIRKVADSYRAKGL" gene 360379..361632 /locus_tag="SKA53_01911" CDS 360379..361632 /locus_tag="SKA53_01911" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, beta subunit family" /db_xref="CDD:10534" /translation="MGYSGFQIIKEGLFGQKGWKPLWRDPAPKARYDAIIIGGGGHGL ATAYYLAREHGLTNIAVLEKGHIGGGNIGRNTTIVRANYFLPGNQEFYSHSLKLWEGM EQDLNYNVMHSQRGLINLFHSDGQRDAFVRRGNAMINQGDDAILLDREGVRSHLPYLD FDNGRFPIYGGLYHPRGGTARHDAVAWGYARGADQRGVDLIQNCEVTGIDIENGVVTG VQTTRGAIRARKVGIVTAGRSGQVAAMAGMRLPIESHVLQAFVTEGLKPVIDHVVSFG MGHFYISQSDKGGLVFGGDLDFYASYAARGNLPMAEHVMEAAMTLMPMIGKARVLRSW GGIMDMTPDGSPIIDTTPTKGLFIDCGWCYGGFKAVPASGFAFAHLMATGQPHATAAK FRLDRFRTGVGLMDEEGTGSQHNLH" gene 361678..361941 /locus_tag="SKA53_01916" CDS 361678..361941 /locus_tag="SKA53_01916" /note="COG4311 Sarcosine oxidase delta subunit" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, delta subunit family" /db_xref="CDD:9826" /translation="MRINCPHCGERDRREFYYMGDAVAVTRPAPDAGPDAWDDYLHNR DNPAGDTRDLWYHEAGCGAWIVVARNTLTHAVHGATLAQKAAS" gene 361938..364835 /locus_tag="SKA53_01921" CDS 361938..364835 /locus_tag="SKA53_01921" /note="COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, alpha subunit family" /db_xref="CDD:10278" /translation="MRLRNPGQTVTFSFDGKPVQGVPGEPVAAALLASGIRLMGRSFK YHRPRGVLTAGSEEPNALVTVGRGAAQDPNQRATMVEVSEGLEVFSQNAWPSLRHDAL AVNDLLSPFLGAGFYYKTFMWPASFWERLYEPVIRRAAGLGRLSGKANADLYEKAFAF CDLLVIGAGPAGLMAALTAGRAGVDVILADEDSAMGGRLLREVEDVDGRPAALWVADV LAQLRALPNVRLMPRTTVTGAYDQGTYGALERIVGADAPGECFWRIVAKRSVLCAGAL ERSIAFPDNDRPGIMLAGAVRAYVTRWGVAPGRSVTVFGNNDDAHRTARDLAAAGIKI AGLIDARADLAVSADYPVFTGGSVTATAGRLGLTSITVTHQGGTRVIQTDCLAVSGGW NPSVHLTCHMNGRPQWREDIAAFVPTPDAIPGMAVAGACHGVFDTQGCLRDGAEVAAA IARDLGFAPEVTLPVAEARAYAIAPFWETPGKGRKWVDLQNDVTTKDIAISAQENMRS VEHMKRYTTQGMAPDQGKSSNVLALAVLADLTGRGIPETGTTTFRPPFVPVSIAAMGA GGQGKGFAPTRLMTSHHASVAARAPMIEAGLWYRPSYFPLEGDVSWRQSCDREVNYVR NVVGVCDVSTLGKIDVQGPDAAPLLDFVYTNRMSTLKVGRVRYGLMLREDGFVMDDGT AARLGPDHFVITTTTAAAGQVMRHLEFARQVLRPDLDARIVSVTDHWAQFAVAGPRAQ VLLNTVLDEQITDEDWPFMACGAVGIGGVAGRLFRISFSGETAYEIAVPARYGESLFR QLVAQARTLGGGPYGLEALNVLRIEKGLLTHAELHGRTTAYDLGLAGMVSVQKDCIGQ AAARRPGLVDPMRERLVGLRAVEEGRRLTAGAHLFAKDAKAVTANDQGYVTSACYSPT LDCYLGLAFVKNGPERYGEVIRMVDHLRGVDTLAEVCHPVFFDPEGGRARG" gene 364837..365370 /locus_tag="SKA53_01926" CDS 364837..365370 /locus_tag="SKA53_01926" /note="COG4583 Sarcosine oxidase gamma subunit" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, gamma subunit family" /db_xref="CDD:9827" /translation="MIALGAFGDLLPLQTGDVTCTEVMRETLFCVAPYRGQHKAVSAA LKAQLGLSLPAAGRRKIAGDAICQWIGHDAWVVSAPVMLDGLAAVSDQSDGYAALDVA GAGVEAVLARLIPLDLRSTTFKVNHTARSLLGHVPVSITRTGAQAFEVMVMRSMAASL VHDLQVAMSGLARRGSA" gene 365486..367450 /locus_tag="SKA53_01931" CDS 365486..367450 /locus_tag="SKA53_01931" /note="COG0358 DNA primase (bacterial type)" /codon_start=1 /transl_table=11 /product="DNA primase" /db_xref="CDD:10232" /translation="MSLPPGFLDELRNRLSLGQVVGRKVMWDARKSNPGKGDLWAPCP FHQEKSASFHVDDRKGYYYCFGCHAKGDAISFVRETENVDFMEAVKILAGEAGMPMPE RDPAAQQKADLRGQLVEVMEKVIKWHRLQLQTAAATEARDYLARRGLSPEAQARWDIG FAPAQGGALAHLSAQGVDAKLVIAAGIAAESDRGGAPYDRFRGRIIFPIRDARGRAIG MGGRAMDPNAPAKYYNSPETPLFDKGRSLFNHGPAREAAGKGKPLIVAEGYMDVIALA EAGFTATVAPLGTAITEDQLRLLWRIAPEPIIALDGDTAGLRAAMRLIDIALPLLESG QSLRFALMPPGLDPDDVIKTQGAGAMQKLLDAAIPMVQLLWQRETEGKNFDSPERKAA LDKALRDKIKLIADPSIRSHYGEAIKEMRWALFSTRRPAAPRAQGGTWSRNADPWKRA ISPVATARNSMLGAGAVSQEHLREAVILATMIVAPSVAVEFGDALERIDCRDPAHRDL QAAILRHLGNADLETIISADLGADALEKLLTQSHVAISPAVRRKGEAEVARLCLAEEF AKLTARRGHAREIEDAVEDLGGLADEGLTWRLAQASAAVDKAGRGDNEDRAEYAVGPN GARMKKDERSALDQLLDQINFAKGQDRPRS" gene 367580..369559 /locus_tag="SKA53_01936" CDS 367580..369559 /locus_tag="SKA53_01936" /note="COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /db_xref="CDD:10439" /translation="MAAKDTDDRKDNDQDGDISLDMSQAAVKRMIADARERGYITYDQ LNAVLPPEQVSSDQIEDVMSMLSEMGIQVTEEEESEESDDGAGGTDIATVSGSRDVTI GGAEAEKLDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRNTMILGLCESPLTF QAITIWRDELLSEDILLRDVIDLETTFGNQLGEEGEVETVVTAASVSDTKEDGGSELD ADGNPISKDDDDDDDDQANMSLAAMEAALKPRVLETLEIIARGFADLSDMQDARMSAT LNEDSSFSVKEEERYQTLRSEIVVLVNSLHLHNNRIEALIDQLYGINRRIMSIDSAMV KLADQARINRREFIDEYRGRELDPNWLEQMAEKSGRGWQALVEKSTDKIEELRNDMAQ VGQYVGVDITEFRRIVQQVQKGEKEARQAKKEMVEANLRLVISIAKKYTNRGLQFLDL IQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINK LVRTGRQMLHEIGREPTPEELAEKLQMPLEKVRKVMKIAKEPISLETPIGDEEDSQLG DFIEDKNAILPLDSAIQENLKETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQ QFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ" gene 369878..370348 /locus_tag="SKA53_01941" CDS 369878..370348 /locus_tag="SKA53_01941" /note="COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15551" /translation="MRCPFCGNVDTQVKDSRPAEDHVAIRRRRFCPACGGRFTTYERV QLRDLVVIKSNGRREDFDRQKLERSIRIALQKRPVEPERMDQMISGIVRRLESLGDTD IPSGTIGEIVMESLARIDTVAYVRFASVYKNFQAADDFDKFVSELRPHAAKEDE" gene 370345..371424 /locus_tag="SKA53_01946" CDS 370345..371424 /locus_tag="SKA53_01946" /note="COG0117 Pyrimidine deaminase" /codon_start=1 /transl_table=11 /product="riboflavin biosynthesis protein RibD" /db_xref="CDD:9992" /translation="MTDARYMALALQLGRRGMGRVWPNPAVGCVIVNHGRIVGRGWTQ DGGRPHAETVALAQAGPDACGATVYVTLEPCAHHGQTPPCAAALIAAGVARVVVALGD PDARVAGRGIALLEQAGIAVETGLLADQARADHAGFLSRITAARPFVTLKLAGTLDGR IATASGESQWITGTEARRAVHMMRARHDAVLVGAGTVRADDPALSVRGLGIPRQPVRI VVSRAVKLPLTSQLAQTARQSPVWICHGAEADVADWLALGAVSLPCAVRAGQVEPEAM MQALASAGITRVFCEGGGMLAASLLGAGLVDDLVVMTAGCAIGAEGTPALAAMGIGRL ADAPRFALHDLARLGDDVMTHWRRV" gene complement(371476..373470) /locus_tag="SKA53_01951" CDS complement(371476..373470) /locus_tag="SKA53_01951" /note="COG3563 Capsule polysaccharide export protein" /codon_start=1 /transl_table=11 /product="capsular polysaccharide export protein KpsC" /db_xref="CDD:12890" /translation="MPDEPRQNLYVYSGGFLTQPRIRRILTLAGFDIRLGAPGPQDNV GVWGQSPTAPRGEAVARHKGAGLIRVEDSFLRSVRPGRSGDLPIGLNIDRRGVHFDPA TPSDLEMILAHDPLDDTVLLNRAKAGISALQAEHLSKYSCFDPATPVPDAGYVLVIDQ TRMDASITASGADSNTFREMLFFAQTEHPSQRIVIKTHPETMTGDKAGYFTAADTSDR ISLCAAPVSPWALLAGAVAVYTVTSQLGFEAILAGHKPVVFGQPFYAGWGLSDDRKPL PRRQRRLTRAQLFAGAMILYPTWYDPYHDRLCSFEEATATQSALTRAWRDDHQGWVAA DMRLWKRSPLQQFFGQYAQVRFARGAKAAPQAEQTNRRLMRWASTDARDAVLVEDGFV RSRGLGADLVAPLSLVLDDLGIYYDATRPSRLEALIAGSTTLPATARDRAAALIKRIR AAGLSKYNLQGTPLPDLPKGRRILVPGQVEDDASIRLGAGAVRSNAALLQAVRAANPA AVIIYKPHPDVRANLRPGHISNARDWADLVLEDADPIAAIQACDCVWTMTSLLGFEAL LHDRPVSCLGMPFYAGWGLTDDRTMPLSRRNKTLDLTALVHAALIAYPRYRDPVSGLP CPVEVIVDRLTHGDIPPATRLNRATAKLQGLFASAAPLWR" gene complement(373480..373656) /locus_tag="SKA53_01956" CDS complement(373480..373656) /locus_tag="SKA53_01956" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQTSQVPGGFYSAKGRRNLIRHVVPMMLAEAGPYAAPCGNDQAH DLQTAALAKIQRVA" gene complement(373729..374778) /locus_tag="SKA53_01961" CDS complement(373729..374778) /locus_tag="SKA53_01961" /note="COG3562 Capsule polysaccharide export protein" /codon_start=1 /transl_table=11 /product="capsular polysaccharide export protein KpsS" /db_xref="CDD:26354" /translation="MSSQRRFLFLQGPHGPFFRQIAAALRTSGADVWRVGFNAGDAAF WWRSPGYLPFRDNPDAWPSALADTLRDKQITDIVLYGDTRPIHAEAVRQARATGLRIH VFEEGYLRPYWVTYERGGSNGHSQLRSLSIADMRAHLAQPGQDQPTPPSHWGDMRQHI FYGALYHWFVMFRNASYPQFRPHRALPVRTEAQLYTGRLLMMPIMALLRGLATLRIKA GGYPYHMALLQLEHDSSFQIHSPFRDMESFIDVVIAGFAKGAPAGHHLVFKTHPLENG RKPLRRLIRQAATAQGIAHRVHFVRGGKLARLLDSALSAVTVNSTAGQQVLWRGIPLR IFGAAVYDKPQFVSD" gene 374907..375503 /locus_tag="SKA53_01966" CDS 374907..375503 /locus_tag="SKA53_01966" /EC_number="2.5.1.9" /note="COG0307 Riboflavin synthase alpha chain" /codon_start=1 /transl_table=11 /product="riboflavin synthase subunit alpha" /db_xref="CDD:10181" /translation="MFTGIVTDIGRVLALDQQGDLRARIGTGYDVAGIDIGASIACNG VCLTVIALGRDPQNWFDVQISAETVGATNVSGWTVGKRLNLERALKVGDELGGHIVSG HVDGVAEVVAMRDEGDSTRVTFRAPEALARFIAPKGSVALDGTSLTVNEVAGRDFGIN FIPHTKTATTWGDVAVGDLINIEIDTMARYVARLQDYA" gene 375590..376762 /locus_tag="SKA53_01971" CDS 375590..376762 /locus_tag="SKA53_01971" /note="COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase" /codon_start=1 /transl_table=11 /product="Bifunctional GTP cyclohydrolaseII/3,4-dihydroxy-2butanone-4-phosphate synthase" /db_xref="CDD:4383" /translation="MLGYLAGNQAAGSHMSITFETPGPVEQDWSDAISKIEDIIDDAR NGRMFILVDHEDRENEGDLVIPAQMATPDAINFMAKHGRGLICLSLPGSRIDALGLPL MASNNSSRHETAFTVSIEAREGVSTGISAADRARTVSVAIDAAKGAADIATPGHVFPL RARDGGVLVRAGHTEAAVDISRLAGLNPSGVICEIMKEDGEMARLPDLVAFAQLHGLK IGTISDLIAYRRRHDNLVVLRDSQTITSEFGGDWEMRIFVDETQGAEHIALIKGDITT PDPVLVRMHALDPMLDVVGVGPKGRRNEFGDAMQLIADEGRGALVLLRDLQMKLDPSE EATPQTLRQYGLGAQILSALGLHDITLLTNSPKPRVVGLDAYGLEIVGTRKISEIG" gene 376762..377289 /locus_tag="SKA53_01976" CDS 376762..377289 /locus_tag="SKA53_01976" /note="COG0054 Riboflavin synthase beta-chain" /codon_start=1 /transl_table=11 /product="riboflavin synthase, beta subunit" /db_xref="CDD:7812" /translation="MAGPSHHILPLPEFDKPVKILIAASPYYKDISDHQIAGALAEIA KAGASHEIVHVPGALEIPTAIGIAARMSDFDGYVALGCVIRGETTHYDTVCNDSSRAL QLLGLQGLCIGNGILTVENYAQAVVRADAAQMNKGGGAAAAALHLVALARKWGKAEKG VGFTRDILMTGHTTA" gene 377286..377753 /locus_tag="SKA53_01981" CDS 377286..377753 /locus_tag="SKA53_01981" /note="COG0781 Transcription termination factor" /codon_start=1 /transl_table=11 /product="putative N utilization substance protein B" /db_xref="CDD:10649" /translation="MTISNNQRRKMKSAARFYAVQALFQMEATGQTVEGIVREFEDHR FGEIIDDVELVEGDVDTFRRMMDRAVDLQASIDQMTDRALVEKWPIARIDPTWRALFR AAGAELLDKDTPPKVVISEFVAVAEAFSHDGKEPKFVNAVLDHMARQAQPEAF" gene complement(377868..378302) /locus_tag="SKA53_01986" CDS complement(377868..378302) /locus_tag="SKA53_01986" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSIMQRRTGYLSRYTKATGAACAALIIAAAPVQADPTIGFGLSI SYGQQKVDTGVGVRVFSDNERDSNVASVGLDYMLISQSWRATIGAAHLDDDTYVGLDL GFDGDFDFGVSAGWLKEQTEQVFAQATGLQPIIPDQSLGQRR" gene 378541..378867 /locus_tag="SKA53_01991" CDS 378541..378867 /locus_tag="SKA53_01991" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGDDDMTHDDEPDLMRLYLRHCAVGFVVAAGFVALLLWHDVARL GTLVANSDIGWLAVFLLWFFHGTVFGSVQFAISIMLDAQDDDDDDQSGGQLIPIRVTA GSRRGR" gene complement(379080..379226) /locus_tag="SKA53_01996" CDS complement(379080..379226) /locus_tag="SKA53_01996" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSLIASVTFFEICMALLTIGLAERLLLGYAPASLVGRDGWLLRG DIEE" gene 379380..379838 /locus_tag="SKA53_02001" CDS 379380..379838 /locus_tag="SKA53_02001" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25191" /translation="MSSGFVSPALQPGQRLARGVCRHLRGHDFVSVEELVPIPGLRVD VMALGPKGEIWVIECKSSRADFQTDRKWQGYLDWCDRFFWAVDAAFPLDLLPDDTGLI IADSYDAEILRMGPDRPLPPARRKMLTQKFARHAAIRAQMARDPGFVSAF" gene complement(379825..380016) /locus_tag="SKA53_02006" CDS complement(379825..380016) /locus_tag="SKA53_02006" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGINSERDIEANMQIGPTELGMVRIFIEAGDTEIPMDFEPEEAE EIADEIRAAAQAARAVKKR" gene 380141..380214 /locus_tag="SKA53_t03223" tRNA 380141..380214 /locus_tag="SKA53_t03223" /product="tRNA-His" gene 380237..381286 /locus_tag="SKA53_02011" CDS 380237..381286 /locus_tag="SKA53_02011" /note="COG0564 Pseudouridylate synthases, 23S RNA-specific" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthase D" /db_xref="CDD:10435" /translation="MMTENLMGPTLITFTIAQNPPPRLDKALGRDVPNDAALSRSRLA RLIADGAVAVDGQVVTDPRFRIAEGAQVAVTVAVAVESHIEAQDITLDVVFEDDDLIV INKPAGMVVHPAPGTADGTLVNALIHHCGDSLSGVGGLKRPGIVHRIDKDTSGLLVVA KSDRAHHHLADQFADHTVERRYIAVCYGVPEANDPRLRGIKGTSFEPGNILKIQTQLG RHRTDRQRQAVSFTAGRHAVTRVRILAALGAMPVAALVECWLETGRTHQIRVHLAHCG HALIGDPTYGSRRKMSPKALGEAGVAAVAAFPRQALHAATLGFVHPVTEEFLEFSAPL PADMQALLAAMGAPV" gene 381432..382343 /locus_tag="SKA53_02016" CDS 381432..382343 /locus_tag="SKA53_02016" /note="COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /db_xref="CDD:10439" /translation="MEGTTVSDYKNLPAPTPEGGLNRYMQEIRKFPMLEPEEEYMLAK RWVDHEDTEAAHKMVTSHLRLAAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEK GFRLATYAMWWIRASIQEYILRSWSLVKMGTTSAQKKLFFNLRKAKNRIGALEEGDLR PENVKQIANDLGVTEDEVISMNRRLSGGDASLNAQIGSDGEGSMQWQDWLEDDSANTA ADYEEHDELDARRALLVEAMTLLNPREKDILVQRRLAEETVTLEDLSARYEVSRERIR QIEVRAFEKLQSRMTQLAREKGMLESA" gene 382469..383449 /locus_tag="SKA53_02021" CDS 382469..383449 /locus_tag="SKA53_02021" /note="COG0673 Predicted dehydrogenases and related proteins" /codon_start=1 /transl_table=11 /product="oxidoreductase, Gfo/Idh/MocA family" /db_xref="CDD:10542" /translation="MTMTPIRWGILGAADFARRFMGPAIHAAKGAELYALATSSPAKA AHFADFAPHVIVHDSYDALLADPAVDAVYIPLPNHLHVDWSLKALAAGKHVLCEKPMG LAAADYDRLIAARDAAGLLAAEAFMIVHHPQFARARALYAQGAIGKLMHVDATFTYNN ADDVTNIRNRPETAGGALRDIGVYTFGAARFVTGQEPDAITYADLRLENDVDVFAQIA ARFPDFTYSAIVSMRMHPRQQITFHGDKGILRLTCPFNANVFDMAQLTLETDGTSTIS ERWPGVNHYIVQVENFGHTLRGTARYPCALEFSRGTQAMMDMVFTAGARR" gene complement(383507..385312) /locus_tag="SKA53_02026" CDS complement(383507..385312) /locus_tag="SKA53_02026" /note="COG1164 Oligoendopeptidase F" /codon_start=1 /transl_table=11 /product="Oligoendopeptidase F" /db_xref="CDD:10883" /translation="MQNPVYDANTSGKNSFGDLPEWDLTDLYPSPDSPEITRDMAWLE TECAAFAADYEGKLASLDAAGLLGAVQRYEQIDVIAGRIMSFAGLRYYQITTDSDRAK FMADCQDRITRFTTPLVFYGLEFNRLDDTHLAGLLAANADLARYKPVFDRMRAMKPHQ LSDELEKFLHDQSTVGAAAWNRLFDETMAGLEFVVDGDVLSLEGTLNLLTDPDRAKRE AATHALTAVFRENIKIFARVHNTLAKEKEIHDRWRKMPSPQAARHLANHVEPEVVEAL RNAVVAAYPRLSHRYYALKAKWLGLDRMQVWDRNAPLPMDQTRVIGWEEARDTVLTAY AGFDPRMAEIAGRFFDKGWIDAATKPGKAPGAFAHPTVTPVHPYVMLNYLGKPRDVMT LAHELGHGVHQVLAAEQGELLSSTPLTLAETASVFGEMLTFRQLRDTAKTPQDRKVLL AGKVEDMINTVVRQIAFYDFECKLHAARAEGELTPEDINALWMSVQAESLGPVFDFAD GYETFWAYIPHFVHSPFYVYAYAFGDGLVNALYAVFEEGDADFRDKYFAMLRAGGSKH HKDLLAPFGLDASDPAFWDKGLALIESMIDELEAL" gene complement(385376..386965) /locus_tag="SKA53_02031" CDS complement(385376..386965) /locus_tag="SKA53_02031" /EC_number="6.5.1.1" /note="COG1793 ATP-dependent DNA ligase" /codon_start=1 /transl_table=11 /product="DNA ligase" /db_xref="CDD:11503" /translation="MKAFATLFSALDESTKTSAKVAALADYFRTAPDSDKLWTIALFT GRRPKRVITASKLRLWAAEVAGLPDWLFEESYSIVGDLAETIALVLPAPRATSDASLT DWIMHLRALGMQDDDARKAGIIAAWDRLPPAERFLFTKLLTGGLRIGVSAKLMTRALA QATGQPEPELTHKLMGNWTPDSVTWASLIEADDPGTDASRPYPFYLAYGLEDLATLGP PADWSAERKWDGIRGQFILRGGTHYLWSRGEDLMTDRFPELAQLCDALPDGTVIDGEV LAFADDAPLPFAALQKRIGRKTVPRKLLTEAPVILMAYDLLEHDGRDIRALPFADRRA ALARLVARVSTNAPLRLSPQVTFGTWDDLAAARSQSRDVGAEGLMLKRHDSPYLAGRK KGDWWKWKVDPLTIDAVMIYAQSGSGRRANLFTDYTFAVRDGDAMVPFTKAYSGLTDA EFRQITAWVRKNTLQKFGPVRQVPAVHVFEIAFEGINASPRHKSGVALRFPRMLRWRQ DKPVAEANTLDDLREMLRLYG" gene complement(386962..387972) /locus_tag="SKA53_02036" CDS complement(386962..387972) /locus_tag="SKA53_02036" /note="COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10954" /translation="MADVLTFTESGIYCPAGDFYIDPWRRVPRALITHAHSDHARWGM DSYLATPTTAAVMRHRLGDIAVQTIAYDSALRIGDAVVSLHPAGHVPGSAQIRVAVKG QVWVVSGDYKIVDDGLSEPFAPVPCHAFITECTFGLPIFNWTPQDVLRDQINRWWAES AAAGKTAILGAYALGKAQRLLRLLDPAIGPILTHGAVENTNDVLRGIAIPLPATTRVD TTMTAKSHPGALVLATPAALGTPWARRFGPSSTAFASGWMALRGVRRRRAADRGFIVS DHADWAGLNTAITATGAEKIFVTHGYTTAFQQWLREQGHDAHTVSTDYQGEGFDSGED AA" gene complement(388087..389025) /locus_tag="SKA53_02041" CDS complement(388087..389025) /locus_tag="SKA53_02041" /note="COG2267 Lysophospholipase" /codon_start=1 /transl_table=11 /product="hydrolase, alpha/beta fold family" /db_xref="CDD:11973" /translation="MAPAAPFFDDVANGPAGGAAHWLTTRDNRRIRAGHWPGDGAKGT VLIFPGRTEYIEKYGITAQALTAAGYSVLAVDWRGQGLADRLISDPNLGHIGDFADYQ HDVAALLDHAMVLGLPRPFFLIAHSMGGCIGLRSLMNGLDVKAVMFSAPMWGIQMPPA TRAFAWSLTTLSLSFKFDEKLVPGQSATSYPLIQPFAGNMLTDDPEIYAALRGQIAVH PALGLGGPSLRWLNRSLHEMRDLARLPAPATPCITFLGSKESIVDPAAIRTRMTRWRD GVLHDIKGGLHEMLMDKPAMRDSVNATTIAHFDAHR" gene complement(389025..389315) /locus_tag="SKA53_02046" CDS complement(389025..389315) /locus_tag="SKA53_02046" /note="COG3255 Putative sterol carrier protein" /codon_start=1 /transl_table=11 /product="sterol carrier family protein" /db_xref="CDD:4671" /translation="MSDVITEAVSQLNAKMGGNGFDGCAKFVIEDEGAIIIDQTGARA ADDDADVTLTASADVFKAILDDELNPTTAFMTGKLSVDGDMGVAMKLTSVLG" gene 389436..389951 /locus_tag="SKA53_02051" CDS 389436..389951 /locus_tag="SKA53_02051" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:5390" /translation="MLVLGFSLPAVAQTDRLDQLFAELSQTDEDGSLRIEQQIIAEWS KSGSASIDLLLQRGQDALDDGAAEAALDHFSALVDHAPDFAEGYFLRATSFYLLDEIG PAMADLGEALTRNPRHFEAMRGLAVMMEETGRPQAALELYDMILQIVPYSMQAREDRA RLHQQLDGQAI" gene 389977..392751 /locus_tag="SKA53_02056" CDS 389977..392751 /locus_tag="SKA53_02056" /note="COG0513 Superfamily II DNA and RNA helicases" /codon_start=1 /transl_table=11 /product="helicase, putative" /db_xref="CDD:13744" /translation="MQGSRITAVLGPTNTGKTHYAIQRMLSYRTGVIGLPLRLLAREV YDRIVAIKGPGVVALVTGEERIVPPRAAYWVCTVEAMPDGMGCDFLAVDEIQLCADPE RGHIFTDRLLHARGLHETLFLGAETMRGAIAALVPGAQFMVRDRMSELTYTGSKKISR MPARSAIVGFSVDNVYAIAELLRRTKGGAAVVMGALSPRTRNAQVEMYQNGDVDYLVA TDAIGMGLNLDISHVAFSSLTKYDGRRMRHLEPQELAQIAGRAGRHIENGTFGVTGEA PPLDDAVAEAICNHQFRPVAKLQWRNSRLQFGSVKRLIGSLEDRTDDPWLTRVRESDD LAALKTLAQDAEVAARATDGPSVKLLWDVCRIPDFRGISAGEHAGLLTQIYNDLHQLG HVSANWFALQVRRIDRTDGDIDTLSKRLAYIRTWTYVAQRKGWLVDDSHWRDETRAVE DRLSDALHGALTQRFVDRRTSILLRRLKQKESLLAEVNEKGEVTVEGEFVGRLEGFRF RMDKAGSPDEAKTLRQASQQAIAPHLHLRADRFYNAPDTEIDFTEQGGLMWGDQAVGK LVAGSDPLKPGVAVFVDDEAGPDVIAKVQRRLQHFIDRKIAAGFEPLLALKNDETLTG AAKGFAYRMAEHFGIIPRGDIADEVKALEQDARSALRKHGVRFGQFTIFQPLLLKPAP TRLRLVLWSLARDLQEFPQSPPPGLVTVPAAKDAVPGYYAMAGYRAAGERAIRIDMLE RLADLLRDKDSRAGFEVNPDMLSITGMTLDQFADLMAGLGYKAEKAERAKVKPARADV TGDPSVAKPADTPDHADNAAMPTADVPDATPQEMPQEMPAGASVETPDAPEMEVFYTF TWGGRAVRPARPTGGDRPRGNPKSKGKPKGKPTAQASKPDSYQAKPRYEKPIDPDNPF AAALAGFKKA" gene 392748..393137 /locus_tag="SKA53_02061" CDS 392748..393137 /locus_tag="SKA53_02061" /note="COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)" /codon_start=1 /transl_table=11 /product="S4 domain protein" /db_xref="CDD:10906" /translation="MTDAPRPTIRLDKWLWHARFFKSRSIAAGVVTGGKVRVGGNPVS KPARAVGPGDVLTFVQADVARVIRILACGTRRGPAPEAQALYEDLTPVTVPVPQTPGS DRKGRPTKKDRRDMMTQRGMDDPFTLE" gene 393185..393520 /locus_tag="SKA53_02066" CDS 393185..393520 /locus_tag="SKA53_02066" /note="COG1146 Ferredoxin" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster-binding protein" /db_xref="CDD:10866" /translation="MTYIVNDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCG VCEPECPADAIRPDTEPDMEKWVEFNRKYSEMWPVIITKKDPLPGAEEMDGKPGKLDL FSEAPGEGG" gene 393540..394217 /locus_tag="SKA53_02071" CDS 393540..394217 /locus_tag="SKA53_02071" /note="COG1329 Transcriptional regulators, similar to M. xanthus CarD" /codon_start=1 /transl_table=11 /product="putative CarD-like transcriptional regulator" /db_xref="CDD:17166" /translation="MRFVSYAGTLPKGAFLWYDSPNDANDVIPPIGMNPPVTLVTDGF LSPDVPDCHERTIMTKKKSEFSPDQFVVYPAHGVGKIVSVETQEVAGFELEMFVIAFE KDKMTLRVPTHKATDVGMRALATPDVVNHALKTLRGKAKVKKAMWSRRAQEYEQKINS GDLIAIAEVVRDLHRQDDQREQSYSERQLYEAALERLTREFAAVAGDDENAAAAQIGS VLVGRAA" gene complement(394270..395532) /locus_tag="SKA53_02076" CDS complement(394270..395532) /locus_tag="SKA53_02076" /note="COG0151 Phosphoribosylamine-glycine ligase" /codon_start=1 /transl_table=11 /product="phosphoribosylamine--glycine ligase" /db_xref="CDD:10026" /translation="MNILILGSGGREHSLAWAIKQNPKCDRLIVAPGNAGIAQIADCA DLNILDGDAVANFVEENTIDFVIIGPEGPLAAGVADRLRRTGTLVFGPSQAAAQLEAS KSFTKAICDAAGAPTAGYARFTEAAPARAYVQAQGAPIVIKADGLAAGKGVTVAMTVD EALDALDHMFDGSFGPAGTAVVIEEFMEGEEASFFVLCDGTTILPVGTAQDHKRAFDG DQGPNTGGMGAYSPAPVMTDEVTQKALREIIQPTMDEMARRGTPFQGVLFCGLMIENG QPRLVEYNVRFGDPECQVLMMRLGGQVLDLLQACAEQRLHEISVNWADDHALTIVMAA NGYPGDYAKGSVIGGLDSQPADSFHMVFHAGTKRFEGQYQAHGGRVLNITARGASLAE AHEQAYAMAQGVDWPGGFYRSDIGWRAL" gene 395659..397158 /locus_tag="SKA53_02081" CDS 395659..397158 /locus_tag="SKA53_02081" /note="COG1570 Exonuclease VII, large subunit" /codon_start=1 /transl_table=11 /product="Exonuclease VII, large subunit" /db_xref="CDD:11283" /translation="MMDLFEDGPTDKSADNTPEFSVSEISGAVKKTIEGGFAHIRVRG ELGRISRPSSGHIYLDLKDDRSVLSGIIWKGRATALTHRPEEGMEVIATGKLTTFPGQ SKYQMIIEDIQPAGAGALMAMLEKRRVMLAGEGLFDAARKKPLPYLPEIIGVVTSPSG AVIRDILHRLRDRFPRKVLVWPVAVQGQKCAAEVAAAIDGFNRLTPGGALPRPDLIIV ARGGGSLEDLWGFNEEIVVRAAAASDIPLISAVGHETDTTLIDFAADIRAPTPTAAAE LAVPVRIELLAFVDQQGARLVRALSNGVQTRRQRLRDLARALPRVDTLADGPRQRLDY LADRLPAALRQAAAQKRLQLSDAALRPAILQRRLAEDRRRLSALSDRLAPALQRRSRD AAVTLERAGRGLRCDLLQTRLDRQAERLSSVLARLSDRATRQQTERTARLAALDRLRE TLGYMETLKRGYAVVRAGDVLVTDTVAAAKADHLEIQFADGRIAVASRR" gene complement(397147..397614) /locus_tag="SKA53_02086" CDS complement(397147..397614) /locus_tag="SKA53_02086" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIDPTPPAQRQDCLHGCRSRIYRWAAGALRNVGLLLLLTTQANA QNKMTGEAFDAHVTGRTITFRTDTNPAYGIEAYLPGRRVMWSAFDGTCMYGTWYESKG NICFIYDDDPEPKCWATYLQKGTMWATFINVPDGTVIYETDADEPLICNNLSS" gene 397752..399437 /locus_tag="SKA53_02091" CDS 397752..399437 /locus_tag="SKA53_02091" /note="COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit" /codon_start=1 /transl_table=11 /product="formate dehydrogenase, beta subunit" /db_xref="CDD:11603" /translation="MAKDNQDGIWKSGKGKGRHTTKGRQLDDGAMAEILALLGDRPRR RDLLIEFLHLVQDANGHLSAAHLRALAEEMRLSQAEVYEVATFYAHFDVVKESETPPP ALTIRVCDSLSCELAGAQALKAALEDGLDPAQVRVLRAPCMGRCDTAPVLEIGHNHID HATPAKVQAAIVADDTHAHLPDYQTLASYCADGGYAVLEHLRAQGDWQAVQDKVLASG LRGLGGAGFPSGRKWGFVRAHAGPRYLAVNGDEGEPGTFKDRYYLERTPHVFLEGMLI AAWAVEAQTCFIYMRDEYPAVLAILRREIAALEQAGIVAPGFIDLRRGAGAYICGEES AMIESIEGKRGIPRHRPPFVAEVGLFGRPTLVHNVETLLWVARVCREGPDILSSVEKN GRKGLRSYSVSGRVAQPGMYVLPAGSTITDIIAAAGGMAAGHVFKAYQPGGPSSGLLP ATMADVPLDFDTLQPHDTFIGSAAVVVLSQQDRARDAALNMLRFFEDESCGQCTPCRV GCQKAVQLMQAPEWDRALLGDLCTAMADASICGLGQAAPNPIRLVMRHFSDEI" gene 399573..400544 /locus_tag="SKA53_02096" CDS 399573..400544 /locus_tag="SKA53_02096" /note="COG0552 Signal recognition particle GTPase" /codon_start=1 /transl_table=11 /product="Signal recognition particle-docking protein FtsY" /db_xref="CDD:10423" /translation="MAFFSKLKERMFKSSAKIDAGLDAIVAEPAPKPGLIGRLLAPTE AQRRALDDAMLEELEDLLIAADMGVETAQRVIANIAEGHLGKRVSVEEVKRLLMAEVV RIMEPVARPLPIYAKTPQVVLVVGVNGSGKTTTIGKLASQFRAAGKNVVIAAGDTFRA AAVEQLQVWGQRAGVPVLTAPEGSDPASLAYDAMTKAQADGADLLMIDTAGRLQNRAD LMEELSKIVRVIRKKDPDAPHNVLLVLDATTGQNAVQQVKVFQELAAVSGLVMTKLDG TAKGGVLVSLADRFGLPIHAIGVGEQIDDLAPFDPEEFAAALVGLDL" gene 400551..401462 /locus_tag="SKA53_02101" CDS 400551..401462 /locus_tag="SKA53_02101" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="possible transporter, DME family, DMT superfamily" /db_xref="CDD:11784" /translation="MDNLAAYLIAVAGTPEGARLATILALVSALAHAVFGALQKGRHD PWLTRGAIDLWLVVFSAPVALFVVPWPNAATALILVGAVGIHFAYKVAMASAYEKAAF TVVYPVVRGTGPLVTVIAASVFFGEHFTPLQWVGMGCLSGGILLLALRNLAEEKLDPA ALRAGLAWALMGGLLVAVYTTYDAYGIRQAPDAFTFLAWFFFVTALDFPVLALHRYRR MDNPPVLAPLMWRGVIGALVAWVSFGGVMLATMVGKVGEAAVLRETSTVFAALIGWFI LREKVGPRRLLLMTLVALGAVIVETGG" gene 401474..402082 /locus_tag="SKA53_02106" CDS 401474..402082 /locus_tag="SKA53_02106" /note="COG2917 Intracellular septation protein A" /codon_start=1 /transl_table=11 /product="intracellular septation protein A" /db_xref="CDD:12266" /translation="MTKTINPILKQVLELGPTLAFFLIYLRIKDDTYTFAGTDYSGFI VAALVFVPILLVAMTILWVLTGKLSRMQVFTAFMVIFFGGLTAYFNDERFFKMKTTIV YGAMAGLLGIGLLRGQSYLQFVMEEFLPMQRAGWMIFTKRLAFIFVVLAIANEIIWRT QSTETWVKLETFAFPAVLFLFLWVQIIGLQKYLIEDPQQSKD" gene 402251..403420 /locus_tag="SKA53_02111" CDS 402251..403420 /locus_tag="SKA53_02111" /note="COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases" /codon_start=1 /transl_table=11 /product="O-succinylhomoserine sulfhydrylase" /db_xref="CDD:10496" /translation="MMSDWNKRTKAVHHGIRRSQYGEVSEAIFMTQGFVYDSAEAAEA RFIKAGADEFIYARYGNPTVAMFEDRIAALEGTEDGFATASGMAAVHGALAAMLKAGD HVVSARALFGSCLYILQEVLTRFGVQVTFVDGTDLAAWQAAIRPDTKVVFFESISNPT LEVVDIKAVADLAHAHGATVIVDNVFSTPVFSDAVALGADVIIYSATKHIDGQGRALG GVILGTRDFIRGTVEPFMKHTGGSMSPFTAWLMLKGLETMELRVRAQAASAQHIAQAL AADGTLRVIYPGLADHPQHALTMAQMGAGGTVMAIDVGSKDAAFALLNRLEIFTISNN LGDAKSIVTHPATTTHQRLDAATKLELGITPGLIRCSIGLEDPDDLLADLRAAIG" gene 403487..404731 /locus_tag="SKA53_02116" CDS 403487..404731 /locus_tag="SKA53_02116" /note="COG1469 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:3156" /translation="MGVAFCGKGDVGMSDLRADLLQFCRIMSGHAPQLRHLRKADAPQ EGFDMNIHARDMDRQPTRSDAEAALALLRRWAGDVSPEEVATLDPLVSRLIPGQEVSN YPALARAYPEDFAVDEAYKASMPDLQNGPSSLIRGAKQQIQHVGISNFRLPIRFRTRD NGDLTLETSVTGTVSLEAEKKGINMSRIMRTFYKHAEETFSFEVIERALDAYKSDLDS FDARIQMRFSFPMKVQSLRSGLQGYQYYDIALELVESAGVRKKIVHLDYVYSSTCPCS LELSEHARQFRGQLATPHSQRSVARISVLVEDGPILWFEDLIERARAAVPTETQVMVK REDEQAFAELNAANPIFVEDAARLFTEQLQLEPRVSDFRVIASHQESLHSHDAVSVLT EGATFATESLDPRLFASLFHVG" gene 404873..405469 /locus_tag="SKA53_02121" CDS 404873..405469 /locus_tag="SKA53_02121" /note="COG0740 Protease subunit of ATP-dependent Clp proteases" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease, proteolytic subunit ClpP" /db_xref="CDD:10608" /translation="MNLVPMVVEQTARGERAYDIFSRLLKERIIFLNGPVHDGMSQLV VAQLLHLESENPKKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSL LLTAGHPGMRFSLPNSRVMVHQPSGGYQGQATDIMIHAAETQKLKTRLNEIYVKHTGQ PLKKVETALERDNFMSPEEAKEWGLIDEIVVNREKSSE" gene 405606..406871 /locus_tag="SKA53_02126" CDS 405606..406871 /locus_tag="SKA53_02126" /note="COG1219 ATP-dependent protease Clp, ATPase subunit" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit" /db_xref="CDD:10937" /translation="MATTTGNDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELC MDIIREETKASGLKSGEGVPTPSDICAVLDDYVIGQVHAKRVLSVAVHNHYKRLNHAD KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENII LKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVA SVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIARRSKGSGMGFGADVKDVDE RGIGEVFQDLEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALITILTKPKNALVKQYQ RLFELENTKLTFTDDALTAIAKRAIKRKTGARGLRSIMEGILLDTMFDLPGMDTVTEV VVNEEAVTSDVQPLMIHDDVKKKEPATAG" gene 407009..407392 /locus_tag="SKA53_02131" CDS 407009..407392 /locus_tag="SKA53_02131" /EC_number="1.6.5.3" /note="COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit" /codon_start=1 /transl_table=11 /product="NADH-ubiquinone oxidoreductase" /db_xref="CDD:26337" /translation="MGLGQSIKRIFTWWDGQTYGTQLWTSRKGVRVGQDAQGNIYYHN ADDSRRWVIYNGEIEGSRVSPEWHGWLHHTWDEPPTEAPLPRKSWEKPHQPNLTGTMA AYAPAGSIRHVAPATRKDYDAWTPE" gene 407397..407792 /locus_tag="SKA53_02136" CDS 407397..407792 /locus_tag="SKA53_02136" /note="COG4765 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKRLSAILACLLLAAPAPAQEMLSGIGADIRILDKLTGAVTDLE VSNGQTDNVGALSVTLGDCRYPAENVASEGYAALVIHYRAEVAPIFAGWMLASSPALN ALDHPRYDVWVLRCITSLGAGTAPVNRAD" gene complement(407720..408364) /locus_tag="SKA53_02141" CDS complement(407720..408364) /locus_tag="SKA53_02141" /note="COG2360 Leu/Phe-tRNA-protein transferase" /codon_start=1 /transl_table=11 /product="leucyl/phenylalanyl-tRNA--protein transferase" /db_xref="CDD:26113" /translation="MQNADLPLTPALVLQAYRLGVFPMSESRDDPDVFWVDPRRRGIF PLDRFHISHSLTRTIRRGGFRVSFDTAFADVVDGCADRAETWINPSIRNLSITLHDQG HAHAVEVWQDAQLVGGVYGIRIGAAFFGESMFSRATDASKVALAYLLHNLRSGGFTLF DTQFLTPHLASLGAVEITRAQYHRMLAAAVGQSARFTGAVPAPSDVIQRRTQTS" gene complement(408366..409712) /locus_tag="SKA53_02146" CDS complement(408366..409712) /locus_tag="SKA53_02146" /EC_number="6.4.1.2" /note="COG0439 Biotin carboxylase" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase" /db_xref="CDD:13908" /translation="MFEKILIANRGEIALRVVRACREMGVKSVAVHSTADSDAMHVRM ADEAICIGPPSSAQSYLSFPAIISACEITGAQAIHPGYGFLSENAAFVQAVEDHGLTF IGPTAEHIRIMGDKITAKDTMKALGVPCVPGSDGGVPTLKDAQRVGEEVGYPVIIKAT AGGGGRGMKVALTAADMEKAFHGARAEAKAAFGNDEVYIEKYLTTPRHIEIQVFGDGK GNAVHLGERDCSLQRRHQKVFEEAPGPVITPELRARIGKVCADAVAAINYIGAGTIEF LFENDEFYFIEMNTRLQVEHPVTEAIFGVDLVREQLRVASGLPMSFTQDDLRINGHAI EVRINAEKLPNFTPCPGTITQYHAPGGLGVRMDSALYDGYRIPPYYDSLIGKLIVHGR DRPEALARLGRALGELIVDGVDTTIPLFHALLAEPAVQSGDYNIHWLEHWLETHLS" gene complement(409721..410206) /locus_tag="SKA53_02151" CDS complement(409721..410206) /locus_tag="SKA53_02151" /note="COG0511 Biotin carboxyl carrier protein" /codon_start=1 /transl_table=11 /product="Biotin carboxyl carrier protein, AccB" /db_xref="CDD:10382" /translation="MSNKTSHDSDVSFIQALAELLRQNDLTELQVKRDYGENDSLNVR VSRHTQTMVQASAPAATAMTAAPAAAAAPAASTNVDPANHPGAVTSPMVGTVYMAPEP TAAPFVAIGQTVREGDTILIIEAMKTMNHIPAPRAGTVRRILVEDGGAVEYGAPLVII E" gene complement(410340..410612) /locus_tag="SKA53_02156" CDS complement(410340..410612) /locus_tag="SKA53_02156" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPYTAQQRQLPDTLVAPVRSAQGSATLPPERPFVAQAVAARLDS SFAEDPAEILPDDRILRPYGVPMLPADKPDDDIMAQPATQDRPQKL" gene 410783..412153 /locus_tag="SKA53_02161" CDS 410783..412153 /locus_tag="SKA53_02161" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, putative" /db_xref="CDD:13119" /translation="MRVVNLVKEILTFQIGAATAGQDQMTIERMTGTRIREKRMDIGL RQASLASAVGISPSYLNLIEHNRRRIGGKLLTDLARALGVDPSHLAGGADRDLLDQLH SAATLAGDMAEIARAEELAARFPGWAGLIALQARRLAVLDERIGALTDRMAHDPFLAT ALHDVISAVTAIRSTAAILVSQEQIDADWQRRFHENIHTDSLRLGKSSEALVAYLEAP ADAEQSPDTPMGQVDTFLAKNGYHLPMIEAETATPDEVVRLSGLTGAAAALLGGICRQ YAADARALPMAAFAQAAQACNYDPALLATRCGTDFATILRRLPCLPPDAGHPPIGLAV CDAAGALLYLKRVPGFAMPTAGGACPLWPLFGALSRPSQPLRAEAILPGATASHLLCY AIATPLAVHHFDLPPVLRSTMLVMPDMAQGSAAPVPVGIACRICPRADCPSRREPAII GTVTAL" gene 412233..412601 /locus_tag="SKA53_02166" CDS 412233..412601 /locus_tag="SKA53_02166" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="response regulator" /db_xref="CDD:5334" /translation="MGKRVLLIEDEPNIIEAIGFILSRDGWTVHTHQDGQTAMAKVLA LPPDMIILDVMLPGRSGFEILRELRSTDVTKDIPVMMLTARGQDKDRDLALRLGANHF MTKPFSNSDVRDYVRAMMDP" gene 412598..412867 /locus_tag="SKA53_02171" CDS 412598..412867 /locus_tag="SKA53_02171" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKPPAKPPVFLERASYRQRRLGDAAQFLPLLGAVLWFIPLLWAT DGPEAPSKSSMLTYIFVIWLVLIGLAALLSRLLPDTDEASDDMRR" gene 412867..415554 /locus_tag="SKA53_02176" CDS 412867..415554 /locus_tag="SKA53_02176" /note="COG0591 Na+/proline symporter" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /db_xref="CDD:10461" /translation="MVSFNILILVALSYVAVLFLVAFLAERRAAVGEANWLRSPVIYT LSLSIYCTAWTFYGAVGYAARSGLEFVTIYLGPSLVMVGWWWILRRLVRIGRAQRITS IADLISSRFGKSRWLGAIVTVIAVVAATPYIALQIQSVTLSLAVFAQSEGAAWSDGDF VRAAMWFAAGLAVFTILFGTRNLDANERHPGIVTAIAVEAVVKLFALIAVGVFVVWGL GGGPVQMMARIDASDLDLWDQDTNRWFGLIFVSAAAFICLPRMFQVMVVENDDEAQMR FASWAFPAYLLAMSLFVVPIAVVGLDLMPAGSNPDLFVLTIPLSQGANGLAMLSFLGG FSSATSMVIVATIALATMVSNHIVVPFWFSLQGDQRGAMSGDVRQLTLLARRLSIAGV LALGFIYYRLSGGGTALAAIGLISFVGSVQVLPALIGGIFWRGATRPAAAAGLLTGLV VWLWTMFLPSFGPGAVIPVAVFADGPFGIGWLRPEALFGIGGIDPLVHGILWSMLLNS AIFVAVSLITFPSPLERLQGAQFVNVFEHGTGARTWSRLVADAEDLLLMSQRIIGQTE AQRMFAREAASQGIPGQMPKATPDFVARLERELGGSVGAATAHAMIGQLTGGSGVSVE DLIAVADEAAQILEYSNRLEAKSAEQEATARALRDANAKLTALSIQKDAFLSQISHEL RTPMTSIRSFSEILRDDDLAIKDRNRYAGIILDESIRLSRLLDDLLDLSVLENGQVVL RPQTGPLSALLDRAIAAAGLHERNLTILRDRAAEDIEITADLDRLVQVFINLISNAAK YCDAKKPALTIRVSRTKGQHRIDFLDNGIGIAAQNQELIFEKFSRLADESKAGGAGLG LAICREIMHRLQGDITYLHGTSGTAFRVTLPVMSAPVVS" gene 415643..416575 /locus_tag="SKA53_02181" CDS 415643..416575 /locus_tag="SKA53_02181" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="possible flagellar switch protein FliM" /db_xref="CDD:11578" /translation="MAGQAVDTPPVSPLTTSRAVRLALVKAASDAGGLVLRVASTADD VGQLDDLLGGLETGLMLVGLDRRGALAGFVAVDMQLRAAMVEVQTTGRLLDQPADDRP ATGADKALCDPLLVAFLSALPPAVMGTAYEGWVDDVTVGGRLADSRLAGLLLEDGDYR VLRMNVELGTGDRQGEVMLVLPVQAAPMVPEEQAPVMDWETAFSAAVQDAPAMLTARL HQFKMPLGRAQALQVGQVVPLPGCTVNSVRLIAPDGRCVAQAKLGQSAGHRAVRIELA PGPEMADLVSTGVSLPEVGFSFDTAEEGEILEGV" gene complement(416723..417148) /locus_tag="SKA53_02186" CDS complement(416723..417148) /locus_tag="SKA53_02186" /note="COG3453 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12781" /translation="MDIRHITPVYAVSPQIDVADIAAIAAAGFTTIICNRPDAEVPPS HQADTIRAAAEAAGITFAVNPVTHQGLNMGMVDSQMAAADASSGPVLAYCASGTRSSI VWSLGQAGKMPTDAIIQATAQAGYDLGGMRGQLDMLAKG" gene complement(417159..417590) /locus_tag="SKA53_02191" CDS complement(417159..417590) /locus_tag="SKA53_02191" /note="COG2391 Predicted transporter component" /codon_start=1 /transl_table=11 /product="YeeE/YedE family protein" /db_xref="CDD:12061" /translation="MRAVVSFLTGGLFGLGLLISGMTDTTKVQGWLDVFGDWDPTLAF VMGGAIIPMAIAWRFTIGRKPVLAAAFPAPPEPRIGRNLVIGSTLFGAGWGLAGLCPG PALASLSYGGTGGLVFLAAMLAGMMLTPGLRVRFDRAVPAT" gene complement(417590..418015) /locus_tag="SKA53_02196" CDS complement(417590..418015) /locus_tag="SKA53_02196" /note="COG2391 Predicted transporter component" /codon_start=1 /transl_table=11 /product="YeeE/YedE family protein" /db_xref="CDD:26198" /translation="MQQDWIMGLIGGGLIGMAGAFFLLVNGRVMGASGIIGGLVDGSG RSDWQERAALIVGLVIVPAIAALAIGGSETNLTSNWMVIVAAGLLVGIGTRLANGCTS GHGVCGISRLSLRGIVSTAFYIGAGGLTMVLFKHVLGVI" gene complement(418039..418902) /locus_tag="SKA53_02201" CDS complement(418039..418902) /locus_tag="SKA53_02201" /note="COG0491 Zn-dependent hydrolases, including glyoxylases" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family protein" /db_xref="CDD:10362" /translation="MKPEVKAFFDEATNTISYVVREPQGNTCAIVDSVLDYDPAAGRT DTTSADAIIAWVKDQGLNVAWILESHVHADHLSAAPYLQEHLGGKIGIGSNITVVQNT FGKIFNEGTAFQRDGSQFDALFNEADTFHIGQLRADVLHTPGHTPACLTYVIGDAAFV GDTLFMPDFGTARCDFPGGSAEDLYNSIQKILALPDDTRIFVGHDYKAPGRDEFAWET TVGEQKAMNIHIGAGKPLEDFVSMRTTRDAQLGMPRLILPSLQTNMRAGNLPEPEDNG ARYFKVPINQL" gene 418045..418926 /locus_tag="SKA53_02206" CDS 418045..418926 /locus_tag="SKA53_02206" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVDRYFEIARAVVFGFGQVARAHVGLQRWQDQSGHAQLGIARGA HGHEIFQRFARADMDIHRLLFAHGGFPSEFIAAWGLVIVTHENPRVVGQGQDFLDRVI QILCRPAGEIAACGAEIGHEQRITHKGRIADHIGQAGGGVAGRVQHIRAQLADVECVC FIEQRIKLRSVALKSGPFVKDLAECVLHDGDVGPDPDLAAQMLLQIGGGGQVVGVDMA FEDPGNIQPLILDPGNNRIGRCRIGAACGGVVIQNAVNNRASVALWFAHNVGNRVGGF IEEGFDFGFHVDSPLWL" gene 418990..419307 /locus_tag="SKA53_02211" CDS 418990..419307 /locus_tag="SKA53_02211" /note="COG0640 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator SoxR" /db_xref="CDD:373" /translation="MSQATDFQLDPMDAAATEAADLLKALSNPGRLRILCALVPGEMS VGDLETALGASQSYVSGQLLRLRNEGLVSCTRDGRSIRYQLADPRVRPLLERIYEIFC PAV" gene complement(419280..420509) /locus_tag="SKA53_02216" CDS complement(419280..420509) /locus_tag="SKA53_02216" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /db_xref="CDD:27630" /translation="MDLGQTARLKPVLAAVKAMIADEIAPLDDEFLSQVDIGDRWQFT PRQAEILEGLKAKARERGLWNFWDTFRDGPSLNTVEYAYLAEEMGKSHLAAEVFNCNA PDTGNMEVFARYGTDAMKTRWLKPLMAGEIRSAYLMTEPDVASSDATNIAMSCVRDGD DYVLNGQKWWATGAGDPRCAVHIVMVRTSDDAPKHQRHSMIVVPADTPGIVKLRAMEV YGHDDAPHGHMHFRYDNVRVPADHLLLGEGRGFEIAQGRLGPGRIHHCMRAIGQAEKA LALMCERSVSRAAFGKPLAELGENYDLIATARMEIEQARLLCLKAAWMMDQGDKRAAA PWISQIKVVAPAVALKITDMAVQMFGAAGVSQDTPLARQWTHLRTLRLADGPDAVHRR QVARAELARYTAGQKIS" gene 420600..421643 /locus_tag="SKA53_02221" CDS 420600..421643 /locus_tag="SKA53_02221" /note="COG3173 Predicted aminoglycoside phosphotransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12511" /translation="MIDAAKDIGMSLATLDGTLSRVVPGFAGAQKVSKFGTGQSNPTY LITAASGRYVLRSKPLGALLPSAHAVEREFRVMQALAGSGVPVPRVLHLADAATSPSG RAFYVMDYLDGRIFWDPALPEVAQDARAAIYNAMNAALAGLHDVDVAAVGLSDFGKPG NYFARQLDRWGRQYLASVAAPSPDMARIMAWLEQAMPPDDGQVALVHGDWRLDNMIFA RGRPDILGVLDWELSTLGHPLADLAYQCMQWRLPNDGRMRGLGGIERAAHGLPTEAEY VAAYCARRGLPMIDNWAFYLVFAFFRLAAILAGVAARADSGNASNPDQARAYGQAVPV LAALALQVTRDGP" gene complement(421640..421855) /locus_tag="SKA53_02226" CDS complement(421640..421855) /locus_tag="SKA53_02226" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MEMVVWIGAALSVIGLIGIGYSVVMVTRAKRANLSDADMRARLA KVLPINLGALGVSVLGLMTVAVGIMLG" gene 421965..422225 /locus_tag="SKA53_02231" CDS 421965..422225 /locus_tag="SKA53_02231" /note="COG3750 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNDSVIDTTSSVAAEELRQFIERFERLEAEKKDIADAQKEVMAE AKGRGYDTKVLRKIIAIRKRDANDLAEEEAVMDLYMSALGMS" gene complement(422230..423111) /locus_tag="SKA53_02236" CDS complement(422230..423111) /locus_tag="SKA53_02236" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQIAFHIGAHCTDEDRLLKSILKNAQILSQQGIAVPGPGKYRSL IREAIQGLAGNDLHPDTRDILLDTITDTEDLRRLVLSNENFLCVPQRIYEHGVFYPQA ETKTRGLHRLFPDDEISLFLAIRNPAGFLQDTLRRIEQTSIDANLGLLEPEDIRWSDV IRRIKQAAPDTPLTVWCNEDSPLIWDQLIRRLSGIDAQSPIVGATDLLAAVLDPEGLS ILSDSLAKAPFDSDTDRHDMIAAIWAEHARPDAVEQDLDLPELDAATVDHLTTLYERD LDVIDAMPGVDLVLPFR" gene 423269..424849 /locus_tag="SKA53_02241" CDS 423269..424849 /locus_tag="SKA53_02241" /note="COG1178 ABC-type Fe3+ transport system, permease component" /codon_start=1 /transl_table=11 /product="putative iron(III) ABC transporter, fused inner membrane subunits" /db_xref="CDD:10896" /translation="MVIAAMVMMPILAVVWFALTPTENIWPHLINTTLPRYLSNTFVL MLSVGTITAVVGTATAWLVVMYRFPGRAVLQWALLMPLAVPAYVGAYALVDFLEYAGP VQTGLRDAFGWTSPRDYWFPAIRTREAAIVVLSAALYPYVYLLARAAFREQSGAAFEV ARALGAGAWGRFLRVGLPLARPAIAAAVAIVMMETVNDYGTVDYFAVQTLTTGIFSVW LQAGNLGGAAQLASTMLAVIVILVLAEKLSRRKIRFFGSARGARPVAPEPLAGWKAWA VTVLCLFPVLMGFVLPLAVITSHALNADMWLAPGLRRAVLHTVTVGGIAAVVTVVGGV FMVYGVRMSRYRLPALLMPVTAIGYAAPGAVLGLGILVPLAAFDNRLADGIVAAGFSD PGLIFTGSAAALVLAYVVRFFAIAQGAADAALGRVSPSLPMAARSLGRTAGGTLRAVH LPLVRASLGSALLLVFVDIVKELPATLLLRPFNYETLATRVHAKAVLENLSEAAPAAL MITLVGLAAVVLLARANR" gene 424951..425023 /locus_tag="SKA53_t03225" tRNA 424951..425023 /locus_tag="SKA53_t03225" /product="tRNA-Thr" gene 425193..426380 /locus_tag="SKA53_02246" CDS 425193..426380 /locus_tag="SKA53_02246" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="symbiosis island integrase" /db_xref="CDD:27722" /translation="MPLSDIQVRNLKPREKAYKVSDFEGLFVLVKPNGSKLWQFKYRM DGKERLLSIGVYPNISLAQARKTKDGARANVAAGIDPSEAKQQEKRQRREVNDQTFEK LGAEFFAKQRKEGKSAATLSKTEYHLQLASRDFGRKPIIEITAPMILKTLRKVEAKGH YETAHRLRSRIGSIFRYAVASGIAETDPTYALRDALIRPTRKHRAAIIDPQALGRLMN EIDVFEGQATTRIALKLLAMVAQRPGEIRHAKWSEIDFVKKVWSIPADRMKMRRDHIV PLPDQAIALLDQLRRMNGNGEYLFPSLRTWKRPMSENTLNAALRRMGYSGDEMTAHGF RASFSTLANESGLWNPDAIERALAHVEKNEVRRAYARGEHWEERVRLANWWAGYLENL QAM" gene 426462..427313 /locus_tag="SKA53_02251" CDS 426462..427313 /locus_tag="SKA53_02251" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDAGDVNLLSLGDHFAERILKIIVFKDLVEKEVGLLSEDRVARL VGGPDQELDDADQANMIRDDAKFRKLARTAPAELLNSRNQEFALWALGLRPEMFADFD YWGKFDKFSLDELVWLSTGLSPRSGSTEKELRRLAKAPAFPLAEIERRRALIIRAFPQ AQRNHVKAVEFCDWASRVGLKWHTGFHEMVEAAAIRVGQDRAGPTEMPPTGSSERAMQ PRQFRTAAKIITAIAIDAYGHVPNEVRSKTTKDILDACDKAGLTVSNDTILKFLRAGE PQMEDPS" gene 427450..427659 /locus_tag="SKA53_02256" CDS 427450..427659 /locus_tag="SKA53_02256" /note="COG3311 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12645" /translation="MSHQQKFPDTGFIRLSQILYPVGPIPVSKSTWWQGVKDGRFPQP QKLGPRTTVWKVEDIRALFESQMDG" gene 428130..429152 /locus_tag="SKA53_02261" CDS 428130..429152 /locus_tag="SKA53_02261" /note="COG4974 Site-specific recombinase XerD" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27719" /translation="MRKINEENERIKRRYLQYLKVAKRKDPSTVLKAAEGILRFEATT GYASFKRFRIEQAIKFQERLNSDVNKATGKPLSKSTIRSVLAANKGFIFWLADQQGYK SRIRHSDADYFNMDAKGARVASAVRETPYPSLEMARHAFSYMPVDTEIAQRNKALFAF LMLTGARDGAVASLRVKHINMIDGCVYQDAREVKTKNSKTITTYFLPVDAAYLECFTA WMTYLRTAALFGPDDPLFPPAKIKPVDGTFKVVGFSRKTYKNANAIRAVIKEAFTRAD LPQFTPHAFRKTLVKWADTVYPSREAFKAFSQNIGHTSVITTISAYCPISTEQQGVLI KSPRSG" gene 429211..429456 /locus_tag="SKA53_02266" CDS 429211..429456 /locus_tag="SKA53_02266" /codon_start=1 /transl_table=11 /product="DNA-methyltransferase, type I restriction-modification enzymesubunit M" /translation="MFESAFNNIDREHRNEKRLASNLEYAEQTSWILFFTYLEDIEQE RQDEADLGGRDYAFVLVKPNGSKLWWPLWLCGLLGRG" gene 429632..430672 /locus_tag="SKA53_02271" CDS 429632..430672 /locus_tag="SKA53_02271" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11588" /translation="MDFMARRPTIKDVAREAGVSATTVDRVINGRTLVREETMRKIAE AANRVGYHGKGIIQGKLKTSVPEVRLGFILLKKSQEFYKNFALQIEKEVSGRPDYRII VDIRFSSSQSPDEFAQLLQDLGRRCHAIACTAVNDKRLDPVVQRLRDEGVVVVSVLND FAQGIRKGYIGLNNMKIGRTAAWMITKTVHQPGKLAIFVGGNRWHGHDLREVGFRSLV REVDRGFTVLDTLVNLETRQVTYEATLDLLHRHPDLKGIYVAGGGMEGAIAALREVHD IPHVALVVNELTAESRSALIDGYAVMAIATPLPELCAALVDQMVESSSKGVEGASSQY FLEPKLILPEIL" gene 430849..431643 /locus_tag="SKA53_02276" CDS 430849..431643 /locus_tag="SKA53_02276" /note="COG4130 Predicted sugar epimerase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13412" /translation="MTTPNLSYVEFLDLAAQLGCVGVEVRNDITRTLFDGLDATSAGK MAADKGLRLVGLSQVYPFNSWDDAREAAVRALIDTAKAAGAETISLIPRNDGTGLGNG ERQAKVRVALKGILPMLKDADLVALIEPLGFGRSSLRSKSELVDVIDGIDGTAYFKLV HDTFHHTLADGGAIFPEYTGIVHISGVVDPSLGIDQMEDEHRVLVDADDRLGNVAQIQ ALLAAGYDGPVSYECFSPQTHALTDPYTAIKRSFEFIASQLKREAA" gene 431776..432666 /locus_tag="SKA53_02281" CDS 431776..432666 /locus_tag="SKA53_02281" /note="COG1879 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative rhizopine uptake ABC transporter periplasmicsolute-binding protein precursor" /db_xref="CDD:11588" /translation="MAENIGVSMALFDDNFLTVLRNGIQEMADGMDGVDVQIEDAQND VARQLDQINNFVASGVDAIIVNPVDTSATQAMTDAAAAAGVPLVFVNRQPVNVDTLPD NQAFVASNEIESGTLETFEICKMLRAQGLGGGAKAYVMMGELSNQAAVQRTKDVEDIL GIDMCNFIEVIDQQTANWSREQANSLMTNWLSSGEEFHAVIANNDEMALGAIQAMKAA GIDMADVVVGGVDATQDALAAMQAGDLDVTVFQNAAGQGSGALNAAIALANGEDVEQK VYIPFELVTPANIADYLSAN" gene 432762..433847 /locus_tag="SKA53_02286" CDS 432762..433847 /locus_tag="SKA53_02286" /note="COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /codon_start=1 /transl_table=11 /product="Sugar (ribose) ABC transporter (permease)" /db_xref="CDD:10890" /translation="MVDKLSHGIGGLTYDKTKRAWPNEANVFIALILIILAFEALGQI LPYMNGQSMLFDFNTSRDGTIMNIARIKIIILQVAIIGIIALGVTQVIISGGIDLSSG PLVGATAMIVMSFAQTELVNGQLNPKAVFGAWSFDLPVIVPIMVGLVFGAFIGGINGF LIAFTRIPPFIATLGMFLICRGISQWWTKGQPVSFPTDAFAAIGSGMMPVVWFAMLAI LLGLIMKFTVYGKHTYAIGSNEDAARMSGINVRRHKILVYMIASMFAAFAAIVLSSKN LTAQAGMGQFYELYAIAMAVIGGVSLKGGRGSMIGTVLGAMVFGVIQSGFTFIKLDAF YQLMAMGAIIIGAVVLDQYRQQRATAG" gene 433860..434642 /locus_tag="SKA53_02291" CDS 433860..434642 /locus_tag="SKA53_02291" /note="COG1129 ABC-type sugar transport system, ATPase component" /codon_start=1 /transl_table=11 /product="Sugar (ribose) ABC-transport system ATP binding protein" /db_xref="CDD:10850" /translation="MSNDYILETRNLTKHYGGVHALEGANFKLRKGEHIAIMGDNGAG KSTFVRQITGVEQRTRGDVIFDGKPVNFVGPLDAREAGIETVFQTLALADDLDVPDNL FLGRELTKWNFLGPFRLLDYKAMHQATMAGLEKTGVKIPNVRNPIRNMSGGQRQCVAI ARTATFHSKLTIMDEPTAALGVQETAQVENIIRTLKEAGEPLILVSHNMRQVFDLVDR VVVFRRGRICADLDIKNDDVTGEDVVGYITGAKTQAGFEDAA" gene 434639..435415 /locus_tag="SKA53_02296" CDS 434639..435415 /locus_tag="SKA53_02296" /EC_number="1.1.1.-" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase" /db_xref="CDD:25396" /translation="MKNGIHSDTAALVIGGTQGLGLAIAKRLVAEGCRRIVIAGRDPV RGEAAALQIGASFMAADLEDTDSILSLVDKAAHRMGRITALVNAGAMTARGSVLDTTP EAFDRMISANLRSPFFAIQRVSQLAIAAGEPAAILNILSMVTHCGQSFLAPYSASKAA LANVTKNAANALRNHRIRVNGINCGWMDTPGEDAVQKKFHNAGDDWLEKAEAQQPFKM LVKPDHVAGLASYILSDAAGVMTGSLVDFDQNVAGAYPEH" gene 435459..436451 /locus_tag="SKA53_02301" CDS 435459..436451 /locus_tag="SKA53_02301" /note="COG0673 Predicted dehydrogenases and related proteins" /codon_start=1 /transl_table=11 /product="hypothetical myo-inositol dehydrogenase protein" /db_xref="CDD:10542" /translation="MSIRFAVLGAGRIGQVHAKAVSSVNGATLVAIADPVAAAAHHIR DTYGCDIRSIDMILTSDDVDAVIICTPTDTHADLIERFIKAGKAVFCEKPVDLDVARA RKVVDTVVAENGLLMVGFQRRFDPDFMALKQAIDEGVIGEVEMVTLTSRDPGAPPVDY IKRSGGIFRDMTIHDFDVARWLLGEEVTSVQAAASVLTDPAIKELGDYDSVNVILMTA SGKQCTINNTRRATYGYDQRIEVHGSKGSVSAENHRESRIEIANGAGYTRPPLLNFFM SRYTAAYANEIASFVDAIANGTPTKTTGMDGLKALELADAALKSAQTGQAVSLA" gene 436566..437450 /locus_tag="SKA53_02306" CDS 436566..437450 /locus_tag="SKA53_02306" /EC_number="3.5.1.10" /note="COG0788 Formyltetrahydrofolate hydrolase" /codon_start=1 /transl_table=11 /product="formyltetrahydrofolate deformylase" /db_xref="CDD:10656" /translation="MNSFALRVQCTSRRGIVAAVSTYLAEAGCNIIDSAQFDDADTGN FFMRVSFRSEEGLPLEKLRSDFAPIADAFGMNAHFFDEAVKPKVVIMVSRFGHCLNDL LYRWRIGALPVDIVAVISNHMDYQKVVVSHDLPFRYINVTKANKPEAEAQIMQVVEET GTELIVLARYMQILSDALCRKMSGRIINIHHSFLPSFKGANPYKQALERGVKLIGATS HYVTADLDEGPIIEQDTIRVTHAQSADDYVSLGRDVEAQVLSRAIHAHVHGRVFINGD KTVVFPASPGSFASERMG" gene 437450..439381 /locus_tag="SKA53_02311" CDS 437450..439381 /locus_tag="SKA53_02311" /note="COG0524 Sugar kinases, ribokinase family" /codon_start=1 /transl_table=11 /product="5-DEHYDRO-2-DEOXYGLUCONOKINASE" /db_xref="CDD:13205" /translation="MTQDHKTTKPLDLITIGRSSVDLYGAQIGGRLEDMRSFEKYIGG SPTNIACGTARLGLKSALITGVGDEHMGRFIVEQLRAEGVNTDGVKIDPERLTALVLL GIRDSEQFPLIFYRENCADMGLTVDDIDEDFVRSARAVVATGTHLSHSRVAAATIKAL HIARADSMRTALDIDYRPNLWGVAGHGDGESRFVESAAVTEKLQDTLHLFDLIVGTEE EFHIAGGTTDTIAALRAVRAVTAATLVCKRGAAGAVAFTGAIPDTLDKGVAGPGFPVE VFNVLGAGDGFMSGLLKGWLDGADWTTALQYANACGAFAVSRHGCTPAYPSWDELQFF FGRGITRPDLRNDAELEQVHWATNRAHNWSSVKTFAFDHRLQLEEMEGYTLAKGGAFK ELCLDAALKVQGGMPGYGILCDNRIGRSALHRASGAGLWIGRPTEWPGSRPIELEPEL GADYGKLREWAAGNVVKTLVFCHPDDDAETRAKQEEVVKRVWAASRRNGLEFLLEVIP SKVAPIDDGTTPRLIQQFYDAGVFPDWWKLEPFRTEAAWSNAVAAIERNDPRTRGIVV LGLDAPEDELAASFALAAKQPLVKGFAVGRTIFGDAARAWMKGEMNDIDAVTQMAGRF ARLCHLWDQARVAAHAYAD" gene 439385..441226 /locus_tag="SKA53_02316" CDS 439385..441226 /locus_tag="SKA53_02316" /note="COG3962 Acetolactate synthase" /codon_start=1 /transl_table=11 /product="iold protein" /db_xref="CDD:13268" /translation="MTPMTKTIRLTAAQAMVRYVAAQMNGNGEQFIAGCWAIFGHGNV AGIGEALYHVKENLPTYRGHNEQTMAHAAIAYAKQLGRKRAMMVTSSIGPGATNMVTA AALAHVNRLPVLLVPGDVFANRGPDPVLQQIEDFNDGTISVNDVFKPVSRYFDRITRP EQLLTALPRAFRTMTDPADCGPVTLAFCQDVQAEAYDYPESFFAPKVWTTRRIRPDLE ELVALAEAIKDAQCPVIVAGGGVHYSGATDALRAFADAHNIPVTETQAGKSALAWDHP LNLGPIGVTGGTPANTVCAKADLVLGVGTRFQDFTTGSWGLFANPARRIACLNVAAYD AAKHDALPLLADAKVGLEALSEALGEHFAKTPVTGLKSDWFDKVDPLTDAPSDTHALP TDMQVVGAVQRAATDATVVMCAAGTMPGELHKLWKSARPMSYHMEYGFSCMGYEIAGA MGIKMAQPDRDVICFTGDGTYMMANAELATAAMMGIAFTVVVTDNRGYGCINRLQMAT GGAEFNNLLDHSVHAQPSAIDFAAHAASMGATSVKVSSIAELEVALASRSDMQGPYVV VIDTDPYPSTPHGGTWWDVGVPQVSQRAKVIAARADYESNKTKQRAD" gene 441226..442131 /locus_tag="SKA53_02321" CDS 441226..442131 /locus_tag="SKA53_02321" /note="COG1082 Sugar phosphate isomerases/epimerases" /codon_start=1 /transl_table=11 /product="similar to MocC (RHIZOPINE CATABOLISM) , also similar tomyo-inositol catabolism iolE" /db_xref="CDD:10804" /translation="MAVKIGISLIAWQNDDLPELTAAYTTEGAMEDAAKIGYQGVERG RRMPADTAGLRAYLDRYGVALCGGWCSGNLMVSSVAQEKEAVRQQVEQFAALNAPCIV YAECSNTIQGAIIRPVSQRPKLSRDEVMAYGAKLSELAKWSADKGCVLSYHHHMGAMV QDAEDIDWLMEGSTSDLTLLYDTGHLHFAGADPVSVLDKWGHRVHHVHFKDVRQPVLD WVHAGDRSFLDGVAAGVYSVPGDPEGCIDFQAITDKLKAMDYQGWIVVEAEQDPAKAP PFDYSKIGYDHIVKICGCSGLTIVH" gene 442185..442949 /locus_tag="SKA53_02326" CDS 442185..442949 /locus_tag="SKA53_02326" /note="COG3718 Uncharacterized enzyme involved in inositol metabolism" /codon_start=1 /transl_table=11 /product="Uncharacterized enzyme involved in inositol metabolism, IolB" /db_xref="CDD:13038" /translation="MHQITPESAGWRYVGFSLYRLIAGDTVAEVTGDREVILVMVEGK AAITGAGQDWGVLGERMNVFEKTPPHCLYLPNGTDWSATAETDCVLAVCTAPGKGGHQ ARRIGPDGITLTARGKGTNTRHINNIAMENEDYCDSLLVTEVFTPAGHWSSYPSHRHD EDDFPRITYLEETYYHRLNPASGFGIQRVYTDDGQLDETMAVSDGEVVCVPRGHHPCG APYGFEMYYLNVMAGPLRKWRFVPAPHVEWIMERDA" gene complement(442963..444075) /locus_tag="SKA53_02331" CDS complement(442963..444075) /locus_tag="SKA53_02331" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11588" /translation="MSRNDLYITSFYIIKFSCNDVNLSAEKMAQRPTIKDLAQAAGVG VATVDRALNSRSNVRQETLDRVLEAAERIGYPTRVLAARREDTTRPLVKFGFVLHKGG QEFYRNFAQELQKAVETRTDIRGRVIIRFAASQAPDDFAKEILEVSRSCDVIATSAIN HPSLSALAAKLIDEGIPVFALLNDFAQGVRQNYLGLNNVKVGRVAAWMIATQARTNGK LAVFVGGNRWHGHLLRETGFQSYIREYAPEFQMLDTVVNLETRQVTYEATLELLSRQP DLRGIYIAGGGMEGAIAALREARPPGKVALVVNELTEESRKGLVDRYITMVIATPLQH LSRDLIGLMINAVRDGPDSTSSQHFMTPQLYVPESF" gene 444122..445240 /locus_tag="SKA53_02336" CDS 444122..445240 /locus_tag="SKA53_02336" /note="COG3239 Fatty acid desaturase" /codon_start=1 /transl_table=11 /product="putative hydrocarbon oxygenase protein" /db_xref="CDD:12576" /translation="MAMTKRDYSLLGPDAALAVENGLAAADWYHTDIPRQQMKALMKR EDQPAIRDTLILFSAMFVFAAIGVALWPSWWSAPFWLAYGVLYGSAMDSRWHECGHGT PFRTAKYNDWVYQIASFCMVRNPVTWRWSHARHHTDTVIVGRDPEIVAMRPPALFRIF LNFFGILDAFHGWQRMIVNASGKLETEEVTYIPQSEHYKVIRVARIWVVIYAGVIAIA VVLQSILPLMIIGLPRLYGAWHHVMTGILQHAGLADNVIDHRLNSRTVYMNPVSRFIY WNMNYHVEHHMFPMVPYHRLAELHELIKQDAPAANPSILQAYKEVWPILLRQLRYHDE FLTRDLPPTARPYRTDLHEGALGDTGARTTTPQAVPAE" gene 445252..445563 /locus_tag="SKA53_02341" CDS 445252..445563 /locus_tag="SKA53_02341" /note="COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases" /codon_start=1 /transl_table=11 /product="putative Rieske-like ferredoxin MocE" /db_xref="CDD:11854" /translation="MANWIDACAAEDIDEEDVIRFDYDGRTFAIYRSPDNVYFCTDGL CTHEQIHLADGLVMDHTIECPKHNGQFDYRTGKAMRAPVCVNLGTYATKVEGDRVLIE I" gene 445751..446770 /locus_tag="SKA53_02346" CDS 445751..446770 /locus_tag="SKA53_02346" /note="COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="putative ferredoxin reductase MocF" /db_xref="CDD:10968" /translation="MLRDKAITLLDGLQAISLDREVRCVTLSTGVKLGYDKLLFATGA SARQLTCDGGERALSLRTVHDAARIYDIAQPGTKVVIVGAGLIGLELAAVLVARGVDV SVLEYAPVALGRNVPRPLAQRIVDRHVSEGSHIFCGVEVDSITAGHVVLADGRMLAAN LVVAAIGVAPRTGLAAVAGLAIENGVCVNDNLCTDDPHVFAAGDCASVQRGGIRQRFE TWQNAQIQGDIAGRNMAGGQHAFDGPVWFWSDQFDLGLQGVGQTNGAVFATRKVDNDA EVLFYVNEASQLVGAVGLGRGNAIAKDIKLAQKLIEAGVSIVAEHLNDPDINLKTLLK PATTA" gene 446780..447595 /locus_tag="SKA53_02351" CDS 446780..447595 /locus_tag="SKA53_02351" /note="COG0413 Ketopantoate hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /db_xref="CDD:10287" /translation="MTMGLYYKRPTVADIRALKGKRQLTMLYVDTPAEAAAAATAGID MLSIIDPVWNDEMREAAGDCFVQVGLLYGELVTQEDYQRAAHRAVKVGGDCVYCASSM GTIKAIADDGIPVVGHVGLIPSKATWTGGFKAVGKTAQSALHVFNHVKRLEEIGCFGA ELEVVPDRVAKEIAERTNLVLLGMGAGPYADAQYLFAEDVLGHTQGHKPRHAKTYRNF KAELDRLQLERIAAFREFKADVDGCAYPGPEHTVTITDAELERFVASLVAAAS" gene complement(448147..451614) /locus_tag="SKA53_02356" CDS complement(448147..451614) /locus_tag="SKA53_02356" /note="COG1002 Type II restriction enzyme, methylase subunits" /codon_start=1 /transl_table=11 /product="RNA-binding region" /db_xref="CDD:10731" /translation="MTIETFINRWKNSGGSERANFQTFANELCDALGVPRPAPATETA AANSYCFEHPVTFIHTGTQSRGFIDLYRAEHFVMEAKQGVGGDQPDTDSQPSLIPDLP NAVRKGHGTRGTRRWDDTMLRARNQADGYARAVSRKDGWPPFLLVVDVGHVIEVYADF SGQGQGYTQYPDGNRYRITMDDLRNEATQDRLRMIWTDPHALDPSKIAAEVTREVADR LAALGKSFEGQGHEPETVARFLMRCLFTMFAEDVDLIPHNSFSDLLTRLRGHPEHAAP ALKGLWETMNTGGFSQVLMVVLKRFNGGLFKDADALPLNAMQLSLLIDAANRDWREVE PAIFGTLLERALDKKQRHKLGAHYTPRAYVERLVVPTIMDPLRSDWRDVQAAALTLAA QGKEDEARAAVRAFHDQLCDIRVLDPACGSGNFLYVALELMKRLEGEVTALLAELGED QAALSLAGHTVDPHQFLGIELNPWAAAVAELVLWIGYLQWHFRTHGTASPSEPVLRDF RNIENRDAVLTCAGTKARLDDAGNPVTRWDGQTTTHPVTGEQVPDAAARIAVLDYLKP QPATWPDAQFIIGNPPFIGASRMRDALGDGYAEALWKAYPDMPQSADFVMFWWDKAAQ AARDWKPATDKAQAKGARRFGLITTNSLRQTFNRKVLEPHLADPKTPLSLTYAIPDHP WVDAGDGAAVRIAMTVAEKGRAMGRLLTVTEEAKGEAEAEGRLVSFDIQKGKIFGNLR IGADVAGASKLIANGLLSSQGVKLHGKGFLVSEAQARAFGYGTDEAIGTLIRPFSNGM DIARSHRSLLTIDVYDRNIDTVRVKHPDIYQWLYDNVKPQRDENSREHRKKFWWLYGD TFEDLRNAIDGLPRHIVTVRTSRYRYFVFKDFPHLPESGLVGIGLSDGWHMAVLSSKQ HLLFMLATCGWLGAGNDPTYNNSICFNKFPFPDPTEAQKTHLRSLGEQLDAHRKERQA THPKLTLTAMYNVLEKLRANERIEGKDKEIYSQGLVGILRDLHDQIDRAVAEAYGWPA DLSDDDILHRLVDLNRTRAAEEARGLVRWLRPEYQNPAGHAATVKADQGAMDLGPAVA TAKEPWPKTLPEQIKAVRAALTDMGEATPDQVARRFARARAGTVQPLLESLTALGQAR IVEGGRFAV" gene 451869..452090 /locus_tag="SKA53_02361" CDS 451869..452090 /locus_tag="SKA53_02361" /codon_start=1 /transl_table=11 /product="transposase" /translation="MSKTTDTFAPEVRERAVRVVFDNEGQHRSRWQAIMSIVAKIGCA PQTLNDWVNNRRLLGPIGNIPPVKAKANF" gene complement(452282..452545) /locus_tag="SKA53_02366" CDS complement(452282..452545) /locus_tag="SKA53_02366" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MERDLGLADLPEQETRLLYAVAIQTRAKPEVSLVELQEHPLMAD ISRSTFFRALKHLIKRGYLEKTGAEKRAGYKLINAPLGLVPLQ" gene 452871..453008 /locus_tag="SKA53_02371" CDS 452871..453008 /locus_tag="SKA53_02371" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTGEIATRRRCAHKASAAFAIAPQGQPHLTAQSQGVRQGFETGA V" gene complement(453189..454124) /locus_tag="SKA53_02376" CDS complement(453189..454124) /locus_tag="SKA53_02376" /note="COG2951 Membrane-bound lytic murein transglycosylase B" /codon_start=1 /transl_table=11 /product="peptidoglycan-binding protein, putative" /db_xref="CDD:12298" /translation="MTTDRRFIIAALGASVLAGCASRRDTSGTTPPDLLPQRNAGYDA WVAGFRRRALAQGVSSTTFDAAFQNVGFLPGVVTRDRNQTEFRRTLQEYLAIAASDER IAKGRAAYARHASVLNAIEARYGVNRYIVTAIWGLESFYGARQGNIPVIAATSTLAYE GRRGAFFEAQTLQALRILQAGDISPARMTGSWAGAMGHTQFIPTTYAEFAVDFTGDGR RDIWAVDPSDALASAANYLARSGWQTGIGWGRENPRGTLEPQRGGPRFTTTANFRAIK RYNNSDAYAIGVGHLADRIAGGAKLQMPFPPTVAG" gene complement(454388..456583) /locus_tag="SKA53_02381" CDS complement(454388..456583) /locus_tag="SKA53_02381" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="possible glycosyltransferase" /db_xref="CDD:11934" /translation="MCAKSDSSPLLQVESGSYSQKDLHMNLCQQCGTAYFTDDDPVDG YDTQDFAQDYWYNYVQNGAGISAMLEPIFALKSNPTGSLLDIGCGFGYVPHFWQTMGR GDAIGLEMSAYGRIGAEKLGITVVPEYYANAEAIKDRRFDYVYSSEVIEHVEDPFEFI KEISTALSDDGILILTTPSATILTPTSNKHVVLATLSPGFHYFVSSKSALSDLLTQSG FDHVKVHDCGHRLFAWASRKALPDIEIGFSAWDLYLDYLKILSDNADHHVAGGAVYRG MKDSYNLGKFDRADWFYECFKKVAKEGLDLDLADIKPALDLSRNRKQLDNHLVPSWMG CALLYAGLIEGRHGHSVSNRLRLISGSIEVMQKEIDLGAQFAGEPAFFIEVAKQEHQK LSYLDSEIGGDKTDIDYTITLRQPRPMKGRDVCIFAAYTSSDRISDATANYINELQNN KIDVILCLAMDNPAQALDLGNINNDTAIILRKNNGYDFGSWTSCLKHLADWHEANRVL LVNDSMFLLPDLLPTFLKKCGECTEDFIAATESYVRQHHAQTYFMILQNKALQSIAFR NFIENFPFLSNKSDVIQNYEISLLSSIKNEFNLSTRILFPMNDLFCNMPQETYAGVNV SHSYWDHLVSQGLPFIKVELIRDNPLNVGILNWKTVFLANGGSVSSAIDHMSIPRDGK VWTENQPRSHTNIDLDSSKKNRSEFLTILKELNRVRLNARARRRDRAKK" gene complement(456769..457680) /locus_tag="SKA53_02386" CDS complement(456769..457680) /locus_tag="SKA53_02386" /note="COG1209 dTDP-glucose pyrophosphorylase" /codon_start=1 /transl_table=11 /product="glucose-1-phosphate thymidylyltransferase" /db_xref="CDD:10927" /translation="MTQRKGIILAGGSGTRLYPITMAVSKQLLPVYDKPMIYYPLSVL MLAGIREIAIITTPEDQGQFQRMMGDGSQWGLAFTYIVQASPDGLAQAYLLAEDFLAG APSAMVLGDNIFFGHGLVDLLRDAAAQTTGGTVFGYQVSDPERYGVVGFDAAGKAVSI IEKPTTPASNYAVTGLYFLDGTAPAKARSVTPSHRGELEITSLLDIYLVQGTLSVQRM GRGYAWLDTGTHGSLLDAGNFVRTLEQRQGLQVGCPEEIAHAQGWIDSATLAKAAATY AKNEYGAYLRGITTNEYGAHQPAPHDK" gene complement(457677..458546) /locus_tag="SKA53_02391" CDS complement(457677..458546) /locus_tag="SKA53_02391" /note="COG1091 dTDP-4-dehydrorhamnose reductase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10813" /translation="MMHVLVFGQTGQVATALAQQTCADITITCLGRDRADLTDPAACA AIIAQTHADVVINAAAYTAVDRAESEPDLARAINATAPAAMARACAARKIPFLHISTD YVFGGSGSRPWQVDDPTGPLGIYGQTKLAGEDAVRAAAGAHVILRTSWVFSAHGANFV KTMLRLGAMRPDINVVADQHGGPTAADDIAAALISIARAFHTGRGISGTYHFSGSPNV SWAGFARTIFASAGIDCAVQDIPTSAYPTPAARPANSRLDCSALARDYAIAQPDWQGS LRHVLQSLQGERQ" gene complement(458543..459592) /locus_tag="SKA53_02396" CDS complement(458543..459592) /locus_tag="SKA53_02396" /note="COG1088 dTDP-D-glucose 4,6-dehydratase" /codon_start=1 /transl_table=11 /product="dTDP-glucose 4,6-dehydratase" /db_xref="CDD:10810" /translation="MKLLITGGAGFIGSAVVRLAIARGHSVVNLDALTYAACLDNVAS VASNPDYAFEQADIRDRAALDRIFAAHRPGAVMHLAAESHVDRSIDGPADFIATNITG TFNMLEAARAYWTATDKPATFRFHHISTDEVFGSLPADKAVKFTETTPYDPRSPYSAS KAGSDHLVRAWHETYGLPVVLTNCSNNYGPYHFPEKLVPVIILNALAGKALPIYGDGS NVRDWLYVEDHADALLLVLEKGVLGRSYNIGGENERSNLQLVRTLCAILDDLRPKASG SYADQITFVTDRPGHDARYAIDPSRIRDELGWRPSVTVEQGLRLTVQWYLDHAAWWQP LQARAGVGQRLGTKA" gene complement(459596..460198) /locus_tag="SKA53_02401" CDS complement(459596..460198) /locus_tag="SKA53_02401" /note="COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes" /codon_start=1 /transl_table=11 /product="dTDP-4-dehydrorhamnose 3,5-epimerase" /db_xref="CDD:4377" /translation="MACAKKRLEETLVQITTTKLAGVLILSPARFGDARGFFSESWNR KTLAAQGITLDFVQDNHSLSAQIGTIRGLHFQSPPHAQAKLVRCGRGCLFDVAVDIRR DSPTYGQWLGEELSDQNGRQLLIPAGFLHGFITRAPDTEIIYKCTDYYAPACDGAVRF DDPDIGIDWGLPAGVAPILSDKDAAAPLLRDLDTPFVFEG" gene 460197..460310 /locus_tag="SKA53_02406" CDS 460197..460310 /locus_tag="SKA53_02406" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMENIDQTLSSAAYFFLGGFSHNLGGLYEILIEEYYE" gene complement(460486..461121) /locus_tag="SKA53_02411" CDS complement(460486..461121) /locus_tag="SKA53_02411" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine-diacylgycerolhomoserine-N- methlytransferase" /db_xref="CDD:11933" /translation="MTDRSHAALMDDTYRYQRWVYDATRAYYLLGRDHLIANLAPPPQ GRVLEIACGTGRNLQHIAQRYPHTALYGLDISQQMLRSAGAKLGARATLAQGDACDFD PRAAFGVAQFDSIIFSYSLSMIPDWQAALHHALDQLTPKGRLHLVDFGQQHRLPAIAR RVLNGWLARFHVTPRHSLPMVLSDLATAQGLTLQMRDLYGSYAQHAVLTRT" gene complement(461125..462348) /locus_tag="SKA53_02416" CDS complement(461125..462348) /locus_tag="SKA53_02416" /note="COG5379 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyltransferase" /db_xref="CDD:14467" /translation="MTPVTDVAGQLDAAVSQNPRFHVTGIQERLFARLFAGLVYAQIW EDPVADMTALALPAGADMICIASGGCNAMSYLTADPASVTAVDLSPAHIALLRLKVAA AQHLDQAAFYDLFGRANLPGNPALVLDQLAPHLDAQTRDYWAGRHLGRKRAGMFARNL YRHGILGRFIGAVHLLARLARKDLRPLLSAQNLDAQRQFHAAVIDPLFDTRIVRVLAR QRTSLFGLGIPPAQYDKLAADGGGDVIDVLRERTRRLVCDFSVQDNYFVWQAFHRGYA DRPDAAVPPYLARQHFPDIAARADRVRALNQSLTDHLATREKAALDAYVLLDAQDWMN DAQLTALWTQITRTARPGARVLFRTGGHADILPGRVPADLLARWHYDAPASALAFAQD RSAIYGGVHLYRFAG" gene complement(462345..463178) /locus_tag="SKA53_02421" CDS complement(462345..463178) /locus_tag="SKA53_02421" /note="COG2908 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12257" /translation="MTIERLTFPPPSPQRTLFISDLHLGALSSRPDLVLRFLQQHRAD TYVLIGDILDLWHPLLPHWTAQDQAVIDHLQARARNGARLIYVRGNHDPDPSLIPPHA RLDADYVASHVHQSLQGKNYLIVHGDEADDRLIRAHMMTRLGSLIDHGLRRCDRLLRK LSRRQPHVRGLVDWLLIAANKMRYRGRIYEQRMVNLARAKGLDGVICGHFHIAALHDR FGLTYANCGDWVDSMTALEDPGDGTLRRLGGREHAFGLAPQISDRMDAATQLVQKAMT R" gene 463390..464541 /locus_tag="SKA53_02426" CDS 463390..464541 /locus_tag="SKA53_02426" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10312" /translation="MTIARPVNALPVPIRPVGQGRPAVPAQRILIVTDAWAPQVNGVV RSYENIIRELRLLGHDVAVISPRDFPTLPLPGYREIALAVFPYRRLARKIARYAPDRI HIAVEGPLGWAARRYCLRHRRPYSTAFHTNFPAYLALRAPGVVRAPLQKLTLWLLRRF HDRAAHTYVATPSITAQLRAWGFTGVVRPLSRGVDAGVFYPPPVPARNDVPVLLYVGR VAAEKNLDAFLGLTTAQTGPVRKVVVGDGPALGALQRAYPDVAFLGTLTGQALADTYR VADVFVFPSRTDTFGIVLIEALACGLPIAAFDVPGPCDIVTDPSLGALDDDLGAAISR ALIAPGTRESRSAHAYERYSWHAVAAAFLGCPGHDQDRPHGSVLHPAAG" gene complement(464626..465867) /locus_tag="SKA53_02431" CDS complement(464626..465867) /locus_tag="SKA53_02431" /note="COG1748 Saccharopine dehydrogenase and related proteins" /codon_start=1 /transl_table=11 /product="saccharopine dehydrogenase family" /db_xref="CDD:11459" /translation="MKRNVLIIGAGGVAQVVAHKCAQNNDVLGDLHIASRTRAKCDAI IASVHEKGAMKQAGVFESHDLDAMDSAAVAAMIGKTGAQIVINVGSPFVNMTVLEACI QTGAAYIDTAIHEDPRKICETPPWYGNYEWKRRDACAAAGVTAILGAGFDPGMVNAFA RFAVDEFMDDVTSIDIVDINAGNHGRYFSTNFDPEINFREFTGTVYSWQKGAWQENKM FEIGREWDLPVVGKQKAYMSGHDEVHSLAANYPQADIRFWMGFGDHYINVFTVLQNLG LLSEQPVTTAEGLEVVPLKLVKAVLPDPSSLAPDYTGKTCIGDLVKGTKNGEEVEVFV YNIADHKDAYTEVGSQGISYTAGVPPVAMAMLIADGTYDLGRMVNVEELDPKPLFTLL DRIGLPTRVQDAAGDRAWDQA" gene complement(465892..466986) /locus_tag="SKA53_02436" CDS complement(465892..466986) /locus_tag="SKA53_02436" /note="COG0019 Diaminopimelate decarboxylase" /codon_start=1 /transl_table=11 /product="NspC, carboxynorspermidine decarboxylase" /db_xref="CDD:9895" /translation="MQTPYYLIDKSCLLRNLEKISWLREASGVKCLLALKCFATWSVF DFMAEHMDGSTSSSLYEVRLGREKFPGETHAYSVAYADHEIAQVLAYSDKIIFNSIGQ LAKFNDASQGHVRGLRVNPGVSTSEFDLADPARPFSRLGEHDPAKIAAVADQISGLMF HNNCENDSFARFDEMLTLIEDRFGAIIHKMAWISLGGGIHFTGADYPLENLALRLKEF SQKFGVQVYLEPGEAAITGAATLEVTVLDTMHNGKNLAIVDSSIEAHLLDLLIYREPA KIAPNTGAHEWMICGKSCLAGDIFGEFLFDAPLKAGDRLSFQDTAGYTMVKKNWFNGV KMPSIAIRELDGTTRLVRDFDYDDFAAALS" gene complement(467115..467207) /locus_tag="SKA53_02441" CDS complement(467115..467207) /locus_tag="SKA53_02441" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLDGKAKHRFETGAPDCVVADILLRMVPAA" gene 467659..468708 /locus_tag="SKA53_02446" CDS 467659..468708 /locus_tag="SKA53_02446" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="efflux transporter, RND family, MFP subunit" /db_xref="CDD:10711" /translation="MFRFLAILFTTAGLSGTLALPLFAQDLLRPVKLMTVADQDHRMT RTFFGQVNGRQTVDLAFQVGGQIQDLPVIEGQFLPAGDMIAQLDMEPFALQLEQAQLQ KNEADRTVDRLRRLAGSAASQVSLEQAETQAQLAALALRDAANRHRHATLQAPFDALV ASRKIANFSTITAGTPVVRLHDMSELWIEINVPEVLFQRFDSEDDVRFHATFPSHATR YPLVVREFTAEASAVGQTFQVTLALQSTDGLHILPGSSATVTAEATGGLQGAVLPASA VGIDPDGSTYVLSFQPEPDGNGTLHRQSVIVQPADDGSFVAINGLEAGVEIVAAGLPV LENGQRVRRFSGFGN" gene 468720..471782 /locus_tag="SKA53_02451" CDS 468720..471782 /locus_tag="SKA53_02451" /note="COG0841 Cation/multidrug efflux pump" /codon_start=1 /transl_table=11 /product="transporter, AcrB/AcrD/AcrF family" /db_xref="CDD:10708" /translation="MNIARAAIDRALLTWILIIGCLLGGLWGFNSLGRLEDPAFTIKT AVIVTQYPGASAEQVAVEVSEPLETAIQRMAEVARISSVNQPGQSLIEVEIHATYDSD TLPAIWVKLRNRISDAARGLPQGVTAPVVNDSFGDVFGIYYAVVAEGLSNAEKHQLAS FLRRELLVVDGVADVEVRGLPREVIYVEPDMVRAVNMGVAPQAIAGAIANANSVVDAG AQDIGSARTLIQAPEGSDSVSAIAGLSLGVEGQVLSLFDMAHVYRGVEEHPAIIVHHN GEDAFTLGIAGASSENIVDVGSRVDQRLAELELDMPYGVTLHPIYQQHLVVQTASNDF LINLFLSVLIVVLVLALFMGCRAAVVVGTTLFLTVVGTLFFMAIFAIEMERISLGALI IAMGMLVDNAIVVAEGMQIAMQRGKSSRDAAEDVARKTQIPLLGATVIGIMAFAGIGL SPDATGEFLFSLFAVIGISLLLSWILAITATPLLGHYLFRQGAAGGADAYDGRLFRLY GSVLHAAIRARWLVVVALLVVTVACYAGFGQVKQQFFPDSNTPLFFAHYKLSQGTSIH TTSAHLDHLQQWLSKRDEVVSVTAFAGDGAARFMLTYAAERANASYGHLIIRTRTLDD IPALKADLDAFARETLPQGEFRTKRLAFGPGGGDPIQLRLSGSDPAVLRQLAETARAV MQDASPNLRDLRSDWREQELVLAPIYASDRAQAAGIDRDDIAQSLLFATEGTVGGVYR EDERLIPIVVRQAPSAGLALMDQVVYSSSANAFIPIEQAIDGLQFEVQNTLLHRRDRV LTLTLSADVAPGLTTATVQQEIRAAVAAMPVPNGYSVAWGGELESSMDAMTSLGQQLP VSVIVMVLISIVLFSALRQPLIIWLLVPMSVNGVVIGLLATGIPFSFTALLGLLSLSG MLIKNGIVLVEEIDLVRAEGIALREAIVIACVSRLRPVVLAAATTILGMAPLLGGCFL RVDVHHDHGRACLCLGADLDCRAGALRSVLFARRGRHACWCRRALIKA" gene 471637..471771 /locus_tag="SKA53_02456" CDS 471637..471771 /locus_tag="SKA53_02456" /note="COG0841 Cation/multidrug efflux pump" /codon_start=1 /transl_table=11 /product="transporter, AcrB/AcrD/AcrF family" /db_xref="CDD:10708" /translation="MSMSITIMGGLAFASVLTLIAVPVLYDLFFSRDEVGTPAGAGAR " gene complement(472016..472738) /locus_tag="SKA53_02461" CDS complement(472016..472738) /locus_tag="SKA53_02461" /note="COG3473 Maleate cis-trans isomerase" /codon_start=1 /transl_table=11 /product="Asp/Glu/Hydantoin racemase family protein" /db_xref="CDD:12801" /translation="MTAFPYDLQDDSLPRLGLIVLQVDETIEQDFRHLFAPDSVKLHI SRIPSGAELTPDSIAQMETALPTAAGPLPPGLDVVGYACTSGTTLIGAGRVRDLVMGA AQTRAVTDPLTAALAKCRVLGLTRIGIVSPYIASVATPIRAAFESAGITVPATLSFGE EVEAKVARIAPASIANAARALARQAELDGIFLSCTNLRTRDILAPLSVELGLPVLSSN QCLGWHMASLCGMPPPYGHGSV" gene complement(472735..473901) /locus_tag="SKA53_02466" CDS complement(472735..473901) /locus_tag="SKA53_02466" /note="COG0006 Xaa-Pro aminopeptidase" /codon_start=1 /transl_table=11 /product="metallopeptidase, family M24" /db_xref="CDD:9882" /translation="MAEPMMIFAAQEYRDRVAKLQMGMAAQGLDALLLTTPADVFYVT GFLTRFWASPARPWFVIVPVADDPVAVIPSIGAALMGQTWLHDIRTWDAPDPRDDGIS LLTGALADLVPAQGQIGVPMGLETHLRMPLADYDLLRAQLAPRQIVDATACIQRIREV KSEAEINKIRESCAIAGRAFARVPEFAAEGQPLSCVFRDFQIALLTEGADWVSYVAGG AGPDGYGDVISPAGPQPLRRGDILMLDTGAVKNGYFCDFDRNFAIGRASDTARRAHAA LWQATEDTLALLRPGWRACDVHAALCANLQKYGATPSGGRLGHGLGITLTEWPSFTPL DETPLREGMVLTLEPGCVTGDGRIMVHEENIVLRKDGAEVLSPRASHELPEITA" gene complement(473894..474973) /locus_tag="SKA53_02471" CDS complement(473894..474973) /locus_tag="SKA53_02471" /EC_number="4.3.1.15" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="diaminopropionate ammonia-lyase" /db_xref="CDD:10889" /translation="MHYSGPVRNGVFMGQNLKNPWRGSGLPGETLFPLADARDVGQLL ARCPAHAPTPLRQEPALAAHLGIGQLWLKDERGRMGLGSFKALGAAYAIARAAAATNA PDLRHALQGQVYVTASAGNHGLSVAAGAQLFGAAAVIYLSQAVPETFAARLQAKGATV VRDGADYEASMQAATRAADANGWTLLSDSSWPGYTALPLRVMEGYLQLAAEAAAQIDQ PPTHILLQAGVGGLAAAVAAHARHVWGDSPQIIVVEPDAAPALIESIRAGRLVDTTGP VSGMGRLDCKTASMIALHGLARDADDFVTISENTAQRAVDLLAEYQLPTTPSGAAGVA ALLAGLDLPREARVMAILSEGPEDG" gene 475110..475571 /locus_tag="SKA53_02476" CDS 475110..475571 /locus_tag="SKA53_02476" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11236" /translation="MDIFDARLLNALQSRARATAEELSALVGLSPDACRKRVARLRAS GLIEAEIAILDPARAGRGLMLIVEVTLQNERKRDLDRFKSAMQAAPEVMQCYYVTGNA DFILMISARDMAEYEAFTRRHFFAEDNVLRFRTSAVMDRVKTGFAIPVEGD" gene complement(475653..476882) /locus_tag="SKA53_02481" CDS complement(475653..476882) /locus_tag="SKA53_02481" /note="COG1940 Transcriptional regulator/sugar kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11648" /translation="MKGRYKCPKWQVKVCQMDDGLVRSLSMGLSQKGVRDHNERLLLS LLQRHGSLPAPDLARLSHLSPPTISAILRKLESDGLLTRGDPLRGKVGKPSVPMMLDK NGVYSIGIKIGRRSANFLLTDFTGGIRLHRQVTYTHPLPREVFGFVQAGLAAAASDLS HSELARICGIGIAAPFDLWNWHDLTGPNAAEFQSWKNIDFTAEMARFTDLPVFVINDA TAGCQAEHLYGRGKQFRDYAYFFVGAFVGGGIVLNNAVYEGRLGNAGALGSLRSVGPS GESRQLVDTASIHTLEARLRQAGHNPITLWNNPQSWTDLADHVTPWLDQTAIELAKAS LSTCAVIDFEAIIIDGAFPPVIREELVKKVRRAIETEDTRGLILPVIESGSIGSDARA LGAACSPVLSQFMLNNN" gene 477006..478025 /locus_tag="SKA53_02486" CDS 477006..478025 /locus_tag="SKA53_02486" /note="COG1879 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC sugar transporter, periplasmic sugar binding subunit" /db_xref="CDD:11588" /translation="MKKLLISTALVAITSVAATSVQAQGVSACLITKTDTNPFFVKMR EGAEAAAAQAGITLRSYAGRVDGDHETQVAAIETCIADGASGILITASDTSSIVGAVT QARDAGLLVIALDTPLEPIDAANATFATDNFLAGELIGQWAAASLGDAAGDARIAMLD LAVSQPSVDVLRNQGFLQGFGIDLGDANRIGDETDARIVGNDVTAGNEEGGRRAMENL LAIDPMINVVYTINEPAAAGAYEALRSIGRENDVLIVSVDGGCPGVQNVADGVIGATS QQYPLRMAALGIEAIAAFAADGTMPENTPGKDFFDTGVALVTDIPADGVDSINVAEGQ NLCWG" gene 478125..479213 /locus_tag="SKA53_02491" CDS 478125..479213 /locus_tag="SKA53_02491" /note="COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC sugar transporter, inner membrane subunit" /db_xref="CDD:10890" /translation="MSSQKDDFEAVVKTGAPGTVAAFAPARKGGLAQIQHMLHLQPAL VPLFVLAMSILTFGLLLGTKFFSPFALTLILQQVQIVGIVAAAQSLVILTAGIDLSVG AIAVLSSVIMGQFTFRYGLPVEVAVLCGLAFGTAIGTLNGWLVAVMKLPPFIVTLGMW QIVLAANFLYSRNETIRAQDIESQASLLQFLGTTFKVGANDAGQGGATFTYGVIAMVL IFVILAYMLRHTAWGRHIYAVGDDPDAAQLSGVNVRATIISVYALTGFVCAIAGWALI GRIGSVSPTSGQLLNIESITAVVIGGISLFGGRGSILGTFFGALIVGVFTLGLRLAGA DAQWTFLLIGVLIIAAVAVDQWIRKVSG" gene 479189..479980 /locus_tag="SKA53_02496" CDS 479189..479980 /locus_tag="SKA53_02496" /note="COG1129 ABC-type sugar transport system, ATPase component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10850" /translation="MDQKGIRLMEPILQGRGLVKRYGRVTALDHCDFDLYPGEILAVI GDNGAGKSSLIKAMSGAIIPDEGDVMLEGRKVRFTSPNDARREGIETVYQTLAMSPAL SIADNMFMGRELRKPGIMGKVFRQLDRPRMERLAREKLTELGLMTIQNINQAVETLSG GQRQGVAVARAAAFGSKVIILDEPTAALGVKESRKVLELILDVRARGIPIILISHNMP HVFEVADRIHIHRLGKRLCVINPGDYTMSDAVAFMTGAREPETAA" gene 480155..481723 /locus_tag="SKA53_02501" CDS 480155..481723 /locus_tag="SKA53_02501" /note="COG4651 Kef-type K+ transport system, predicted NAD-binding component" /codon_start=1 /transl_table=11 /product="glutathione-regulated potassium-efflux system protein KefC,putative" /db_xref="CDD:13795" /translation="MFEVICISFAFFFGLAVRQVGLPPLVGFLAAGFAINAVGPSLGV PEETGEILKYVAHLGVLLLLFAVGLKLRVEQVFQPQVLAGSLVHFAVTASVFTLGLAV FLQLDWNTALLLAIALSFSSTVFSAKILDAKRDLGSFYGRTAIGILIVQDVIALVVLG IWSGQTPTVWALGVFAIPLLRPALHRLLDFTGHDELLVLMGMLLALVVGGMGFESLGL SAEIGALVMGLLLSTHRRAKELSDALWALKEVFLVGFFLQIGMSGLPDLDDLVFAGVF ALVLPLKGVLFFFLFILFRMRARTSFMAAASLTAYSEFGLIVAAGVLTEWLVPLAVAV SLSFVVSAPLNRLSQRFFDRYEDRLQRFELSRVHVDELPTDLGNARILILGMGRIGTA AYDHLSPVCDRIVAIDADTYKTTAHRAAGRNVWFADVEDAGFWRGLDISLLKVVILAM DNVEAKECSARALRRNGFEGAIVSHALFEDHIDRLTSAGATHTYLTMNQAGMGLADHA ARAIALAVPGDDGA" gene 481751..481957 /locus_tag="SKA53_02506" CDS 481751..481957 /locus_tag="SKA53_02506" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLMNEKPKKVARHGDNIAVKTTQTGLVRLALVMEQMGIATPRRW RLIRMPVRNGRRSWLIAPQQPPTI" gene 482009..482956 /locus_tag="SKA53_02511" CDS 482009..482956 /locus_tag="SKA53_02511" /note="COG0042 tRNA-dihydrouridine synthase" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase A" /db_xref="CDD:9917" /translation="MMDWTDRHCRYLHRLMSRHVLVYSEMVTAPAVIHGDRDRLIGYG PAEHPVALQLGGSDPALLAQAARIAADMGYDEVNLNCGCPSDRVQSGFFGAVLMENAA LVAECVAAMIAAVDIPVTVKCRIGVDDQTPSDVLPDFIARVSAAGVDRFSIHARKAWL QGLSPKENRDIPPLDHDLVIAMKALFPHLHLSVNGGITSLDQAQDFLDRGLDGVMIGR AAYHTPCDILLDADARIYADPSGRSAEDVVHLMLPYIAEHLQNGGRLGQITRHMLGMF QGRPGAKAWRRHLSEHAHQDGAGPQTVLAALAHVTQAAA" gene 483018..483836 /locus_tag="SKA53_02516" CDS 483018..483836 /locus_tag="SKA53_02516" /note="COG0730 Predicted permeases" /codon_start=1 /transl_table=11 /product="membrane protein" /db_xref="CDD:10599" /translation="MPETMLLVQMALFLLVVGAFAGVLAGLLGVGGGIVLVPAFFYVF SVLGFDSPQLMQICLATSLATIIVTSVRSLLAHHRKGAVDWAILKSWAPGIAIGAVIG VMVAASLRSGTLQVVFATLAATVAIYITFGKSHWRLGPVMPGGILRAVLSPVIGFLSV LMGIGGGSFGVPIMTLFNVPIHRAVATAAGFGVIIATPSVAAFMLIDIAVAPPFTIGA VNLVAFVLVIAMTLITAPWGAALAHRTDPIRLKRVFGAFLILVALNMLRKAVGW" gene 483833..484594 /locus_tag="SKA53_02521" CDS 483833..484594 /locus_tag="SKA53_02521" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIQTLHDDGFAVLPHDPAVARWAVAANAACDQMLQRGPPLRHGG TWCVGVDALDNGPDGSVDGVPLAGAWRDLVPVPDHWHRAQLSVVFPGYPAQDAGDTDA AHAFRVNRCAAHVDGLHAEGTPQRRHLREAHTFILGLPLNPSMASPLVVWPGSHTVMR ATFAACFDGVPPTHWGDIDVAAAYQDARRRVFASCPQVAVTALPGQVVMLDRHLLHGV APWDASITDQCRKLAYFRPLGAVADWLSPSFRRAL" gene complement(484531..485229) /locus_tag="SKA53_02526" CDS complement(484531..485229) /locus_tag="SKA53_02526" /note="COG2378 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12050" /translation="MRRADRLMQLVQILRDGSLHRAQDLAAAVGVSLRSIYRDMETLA ASGVPISGERGIGYRVTAAITLPPLNLTLTEVEALHLGLSAVGAADDPDLAQAARQLL AKLDAVMPENPASAPAHGFAIYPFADAARGFQHLPRLRQAVRTRQKLALTLQGEDRTV RPLQLEYWGRLWTCVVWCEKRRDFDVIRVDQITALRVLPSLFVAEAGKSLNDYKARRK DGDSQSATAPSGRK" gene 485423..485641 /locus_tag="SKA53_02531" CDS 485423..485641 /locus_tag="SKA53_02531" /note="COG1826 Sec-independent protein secretion pathway components" /codon_start=1 /transl_table=11 /product="twin-arginine translocation protein, TatA/E family" /translation="MLNNIGLPGLILIAVVVLVLFGRGKISSLMGEVGKGITAFKRGV DDSKKELDDNLAEPRDVTPEDQKAKDKV" gene 485683..486114 /locus_tag="SKA53_02536" CDS 485683..486114 /locus_tag="SKA53_02536" /codon_start=1 /transl_table=11 /product="twin-arginine translocation system protein, TatB" /translation="MSEMVLIGIVALIVIGPKDLPGMFRALGQFTGKARGMAREFSRA MEAAADESGIKDVSKTIRAASDPKKFGVDALKDATSFTKGPATQELAAQRKAAKAKAD ELAKTTQENAARAAVKTAPAKTPAPKPEAPAAVADTPKDKA" gene 486111..486977 /locus_tag="SKA53_02541" CDS 486111..486977 /locus_tag="SKA53_02541" /note="COG0805 Sec-independent protein secretion pathway component TatC" /codon_start=1 /transl_table=11 /product="twin-arginine translocation system protein, TatC" /db_xref="CDD:16847" /translation="MSKSDEIEDSSAPLIEHLAELRTRLIRSVLAFIVGMIISFTVWN PLFNFLTLPLCDALAARDQSCDLQFIALEEGFFVAISISLLGGLIIGFPIISYQLWRF VAPGLYKSEQGAFFPFLVASPFMFFLGAAFAYYVITPLAFGFFLGFQQPGTVMSGTDG STQAAGILFQGSAKAYLSLTIKFIVAFGLCFQLPVLLTLMGKAGLVSARGLRGTRKYA VVGILIVAALATPPDVISQVILFVVVYGLYEVSIQLVARVERKREAKLRAEGLWDDDL HGDGAMDDEPKS" gene 487019..487816 /locus_tag="SKA53_02546" CDS 487019..487816 /locus_tag="SKA53_02546" /note="COG2607 Predicted ATPase (AAA+ superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12124" /translation="MHPAPQKAPDFAAASAFVWHTQPDRLEPVGRINRIDVSLLVGVN RSRDTLLANTQRFAAGMPANNALLWGARGMGKSSLVKAIHGAVQAEHPALKLVEVQRE DLPSITRCLNLLRSSDARFILFCDDLSFGHDDAHYKSLKAVLDGGIEGRPDNVVLYAT SNRRHLMPRDMIENERSSAISPSEAVEEKVSLSDRFGLWLGFHPCDQDDYLAMIRGYC DAFGVTIDDVTLRAEAIEWQATRGSRSGRVAWQYFTDLAGRQGVRLP" gene complement(487839..489041) /locus_tag="SKA53_02551" CDS complement(487839..489041) /locus_tag="SKA53_02551" /note="COG0739 Membrane proteins related to metalloendopeptidases" /codon_start=1 /transl_table=11 /product="Peptidoglycan-binding LysM (possible peptidase)" /db_xref="CDD:2090" /translation="MAQGQSTIRTLLLTSVALAALAACEGFDPDMRDLGNGFSTASAV QDLPKRPRPDDRGVISYPTYQVVVAQQDDTIRGIAIRLGLDANTLAQYNGIEPDTILR RDEIVALPSRLPDGAIAPDAPVAQQPFDVAAVATSALDRADAEGGQITATALPPADQA APPAAVAPATAAIGAEPIRHQVVRGETAFSISRLYNVPVTAIAEWNGLNSEFTIREGQ YLLIPQGGATPQRAPAAVVTAPGAGSETPVPPSAARPLPAATAPVAAPQTPDTGTPAP APAPAAASASRLAAPVQGSIIRAYAPGTNEGVDFGVPAGTDVRAADAGSVAAVTTDTS GGSIVVIRHADGLLTVYTQMDNLTVQKDASISRGQVIGKVRAGNPSFLHFEVRRGLQS VDPMDFLP" gene complement(489104..489745) /locus_tag="SKA53_02556" CDS complement(489104..489745) /locus_tag="SKA53_02556" /note="COG2518 Protein-L-isoaspartate carboxylmethyltransferase" /codon_start=1 /transl_table=11 /product="protein-L-isoaspartate O-methyltransferase" /db_xref="CDD:12113" /translation="MSFDADTKMQFLYALRSKGVTDTRVLTAMEQVDRAAFVRGIFAD RAYEDMPLPIACGQTISQPSVVGLMTQALQVNPRDKVLEIGTGSGYQAAILSKLARRV YTIDRYRSLAEKARQIFADQQIANIITFTADGSHGLPDQAPFDRILLTAAAEDPPGPL LAQLRVGGIMVLPVGQSDAVQSLIRVTRLDTGYEYDELRAVRFVPLLEGLGQE" gene complement(489742..490527) /locus_tag="SKA53_02561" CDS complement(489742..490527) /locus_tag="SKA53_02561" /note="COG0496 Predicted acid phosphatase" /codon_start=1 /transl_table=11 /product="Survival protein SurE" /db_xref="CDD:10367" /translation="MRILITNDDGINAPGLQVLTRIAQDIAGPTGEVWTVAPAFEQSG VGHCISYTHPTMIAELAPRRFAAEGSPADCVIAGLYDVMHDARPDLVLSGVNRGNNAA ENTLYSGTIGGAMEAALQGIPAIALSQYFGPDNRDLADPFDAAIQHGADVVRRLMARD LWDEADYRLFYNVNFPPVAGADVKGMRAAAQGFRRGTHFSAEAQTSPSGRRFLWVRGG TQDVPTDPGTDAAVNLDGYISVTPMRADLTDRAMLPLLQEALA" gene complement(490644..491288) /locus_tag="SKA53_02566" CDS complement(490644..491288) /locus_tag="SKA53_02566" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="oxidoreductase, short-chain dehydrogenase/reductase family" /db_xref="CDD:25396" /translation="MTQIVLITGASRGLGAALARQLAPTHHIIAVAKTVGALEELDDA VQAAGGAATLAPMDITVDAAMQQLCRGIFDRWGKLDMWLHTAVHAAPLAPAGHIGPKD LTKSMTFNVEATARLIAYVSPLLGQTGKAVFFDDPRGGQQFFGAYGATKAAQIALARS WQAETVKTGPRVQILTPAPMPTATRARFYPGEDRSTLTEPTAEAARLLPQILAD" gene complement(491341..492810) /locus_tag="SKA53_02571" CDS complement(491341..492810) /locus_tag="SKA53_02571" /EC_number="2.4.2.14" /note="COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase" /codon_start=1 /transl_table=11 /product="amidophosphoribosyltransferase" /db_xref="CDD:9909" /translation="MSCKDLPTHPFDDDKLREECGVFGVVGITDASNFVALGLHALQH RGQEAGGIVTHDPATGFNQARRMGLVRDNFTNQKVMETLPGTIGIGHVRYSTAGSKGQ TAIRDVQPFFGEFSMGGAAIAHNGNLTNARALRKELIERGSIFQSSSDSECIIHLMAR SMGRNIPDRMEEALRKVEGAFSIVAMTRTKLIGCRDPLGVRPLVLGQLGDGWVLSSET CALDIIGAEFIRDIAPGEMVVISDKGVQSHFPFRRAKSRFCIFEHVYFSRPDSILGDR SVYETRENIGRELAKEAPVDADLVCPVPDSGTPAAIGYSLQSGIPYAMGIIRNQYMGR TFIEPSEQIRNMGVRLKLNVNRALVRGKRIILVDDSVVRGTTSQKIKDMILDAGAAEV HFRIASPPTAWPCFYGVDTPQRDKLLAATMTEEEMRVHIGVDSLKFISLDGLYRAVGQ PNGRDPASPAYCDACFSGEYPVAPSDMIEDGFQTKTAAQ" gene complement(492972..493574) /locus_tag="SKA53_02576" CDS complement(492972..493574) /locus_tag="SKA53_02576" /note="COG1286 Uncharacterized membrane protein, required for colicin V production" /codon_start=1 /transl_table=11 /product="CvpA family protein" /db_xref="CDD:5491" /translation="MDGFTLVDAGVAIIILLSGVLAYSRGLVRETMAILGWIGAAVIA FTFAPQVEPLVRQIPIVGDFIGDSCELAIIAAFAAVFALALVIVSIFTPLFSSVVQRS AIGGIDQGLGFFFGVLRGILLVAVAFFVYDTIFATQQIAAIDNSRSADVFAQLTARIE AQNPEQALGWITQQYQDLVGNCGAPATEITPITAPAPVTE" gene complement(493602..494966) /locus_tag="SKA53_02581" CDS complement(493602..494966) /locus_tag="SKA53_02581" /note="COG1066 Predicted ATP-dependent serine protease" /codon_start=1 /transl_table=11 /product="DNA repair protein RadA" /db_xref="CDD:10790" /translation="MAKDLSFTCSECGAAYSKWSGQCDACQSWNTISENKALASGPKG KSLGALRGKPIPLIDLDTHEPEPPRTQAGVAELDRVLGGGLVKASALLVGGDPGIGKS TLLLQAAARFARNGLKVIYISGEESTAQVQMRARRLGLEKSPVRLAAETNLRDILTTL EAEKPDLAIIDSIQTMWADHVDSAPGSVSQVRASAHELTTFAKRNGMSVVMVGHVTKD GSIAGPRVVEHMVDTVLYFEGERGHQFRILRAVKNRFGPADEIGVFEMTGKGLAEVKN PSALFLSERGAPAPGSVVFAGIEGTRPMLCEIQALVAPSPHSQPRRSVVGWDGGRLAM ILAVLESRCGVPFTGLDVYLNVAGGLRISEPAADLAVAAALVSAREDAAVPSDAVIFG EISLSGALRPVVQTENRLKEAEKLGFTSAITPQQAKQVAVKGINLRQAHDLAAFVEDV FGAR" gene complement(494969..495436) /locus_tag="SKA53_02586" CDS complement(494969..495436) /locus_tag="SKA53_02586" /note="COG2995 Uncharacterized paraquat-inducible protein A" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12339" /translation="MRQALVIANLSLLILFPVAWFAPLMRAGLLPLFSLSEISVITGL QSLWGSDVVLALVVTALAVFLPYLKTILLALVHFGLLADRSLPMLGWLGKLAMADVFL IALYIVVFKSMGWGRVETAWGLYLFTACVLASILISGLTARDRLHASPDQAKS" gene complement(495437..496474) /locus_tag="SKA53_02591" CDS complement(495437..496474) /locus_tag="SKA53_02591" /note="COG0787 Alanine racemase" /codon_start=1 /transl_table=11 /product="alanine racemase" /db_xref="CDD:27994" /translation="MSTGRLTIDLDAVVANWRALDAMTNCKTAAVIKADGYGLGSVNI AKALFKAGVRQFFVAVAEEAAPIRAELGPRPEINVFSGHMKGDTAAIRDLNLTPMLNS VEQVTHHFETLPGHPFGIQLDTGMNRLGLEMQEWAAIAGLALDQNPTLVMSHLACADE PDHPMNPHQLANFHMMTDGISVPRSLSATGGILLGPDYHFDLTRPGIGLYGADPFSDG TPVIELEFPVVQIRDVAQGEVVGYGNSWQAERASRIATISGGYADGIIRSLSDRAIFY HGKTPCKLVGRVSMDLMTIDVTDLSEDPKALSLICAEQTVDDVARRAGTIGYELLTQL GGRYTRRIYGK" gene complement(496532..498025) /locus_tag="SKA53_02596" CDS complement(496532..498025) /locus_tag="SKA53_02596" /EC_number="3.6.1.-" /note="COG0305 Replicative DNA helicase" /codon_start=1 /transl_table=11 /product="replicative DNA helicase" /db_xref="CDD:10179" /translation="MNEIATFNASGTTDASVDLMPHSIEAEQQLLGAILTNNDIFDRV AAIIGPKHFYDPVHARIFETAATRISKNALASPVTLKTFLEDDEGLKELGGPAYLARL AGAAISAFAARDYAQMIYDLAVRRELIQVGRNIADKAAKVDVDSEPKDQIVEAEQALY ALAEQGTTDQGFQSFLRAVTDAVNMANAAYQRDGGMAGVSTGLIDLDKKLGGLHKSDL LILAGRPSMGKTSLATNIAFNIAKAYKKGILPDGTEGAVDGGVVGFYSLEMSAEQLAA RILSEAAEVPSEQIRRGDMTETEFRRFVDAAKSLEACPLFIDDTPALPIAQLAARARR LKRTHGLDVLMVDYLQLVRGTGRSENRVNEISEITMGLKAIAKELNIPVIALSQLSRQ VESREDKRPQLSDLRESGSIEQDADVVMFVFREEYYKEREKPGDHEMEKMAAWQEEME RLHGRAEVVIGKQRHGPIGTVELSFEGKFTRFGNLVKPWQQGGDQQF" gene complement(498224..498895) /gene="pyrE" /locus_tag="SKA53_02601" CDS complement(498224..498895) /gene="pyrE" /locus_tag="SKA53_02601" /EC_number="2.4.2.10" /note="COG0461 Orotate phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="orotate phosphoribosyltransferase" /db_xref="CDD:10334" /translation="MIPSCYPDKAEIARLSASMLLEIGAIAFNAREPFTHASGKKAPT YVDCRKLISFPRIRSTLMDFLSVTIMREAGFEAFDNIAGGETAGIPFAALVAERLALP MTYVRKKPKGYGRNARIEGVMTEGQRVLLVEDLTTDGGSKLSFVDAIRETGATCCATA VIFYYGIFDGVEQTLADHGVQLLHLCTWWDVLAEAKARGAYDPETLAAVEAYLHDPAG WQASA" gene complement(498952..500004) /locus_tag="SKA53_02606" CDS complement(498952..500004) /locus_tag="SKA53_02606" /EC_number="3.5.2.3" /note="COG0418 Dihydroorotase" /codon_start=1 /transl_table=11 /product="dihydroorotase" /db_xref="CDD:10292" /translation="MPDKNLTSLTIRRPDDWHLHLRDGAMLRAVLPETARDFARAIVM PNLVPPVVTGAQAAAYRDRIMAALPEGMDFTPLMTLYLTEATDPADVRAAHAAGIATA VKLYPAGATTNSASGVRDFEKVRPVLEAMAEIGMPLCVHGEVTNHDIDIFDREAVFID KILKPLRKKVPDLKVVMEHVTTQDAVDYVRDNPKNLAATITTHHLIINRNHILAGGIK PHFYCLPVAKRETHRIALVQAAVSGDKRFFLGTDSAPHTDDAKLQSCGCAGIFTATNT MSCLAEVFDVAGALRKLEAFTSLNGPMFYGLPPNEATITLTKGDPVPYPDRIETGDGP VTLFNPGFDLHWRVTG" gene complement(500056..501279) /locus_tag="SKA53_02611" CDS complement(500056..501279) /locus_tag="SKA53_02611" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="putative acyl-CoA dehydrogenase" /db_xref="CDD:27626" /translation="MTHNAAITATGFGPDLGPFDWADPLRLEDQLSEDERMLRDAARQ FAQDKLQPRVTAAYRDALVAPEIFTLMGEAGLLGLTIPEEYGGLGAGYVTYGLVAREI ERVDSGYRSMMSVQSSLVMYPIHAYGSDAQREKYLPGLAAGTLIGCFGLTEPDAGSDP AGMKTTAKKTAGGYVLNGSKMWISNAPIADVFVVWAKSEAHGGKIRGFVLDKGMKGLS APKVGGKLSLRASVTGEIVMDNVEVGEDALLPGVQGLKGPFGCLNRARYGIAWGVMGA AEACWHAARQYGLDRKQFGKPLAQTQLFQKKLADMQTEIALGTQAALQLGRLMETGRA APEMISLMKRNNCGKALDIARASRDMHGGNGISEDFQIMRHMVNLETVNTYEGTHDVH ALILGRAQTGLQAFF" gene 501389..502291 /locus_tag="SKA53_02616" CDS 501389..502291 /locus_tag="SKA53_02616" /note="COG0714 MoxR-like ATPases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10583" /translation="MAFDTIDAAQAALGDQGYICGRPLATVVFLALRLGRPLFLEGEA GTGKTEIAKALAAALGRRLIRLQCYEGLDASSAVYEWNFAEQMIAIRTAEATGGADRS TLKSELFTEDYLIERPLLQAMRPQPGGAPILLIDELDRTDAPFEAFLLEALSDFQVTI PELGTIKAAEPPIVILTSNRTREVHDALKRRCLYHWVDYPDFDREIAILHARAPEASA ALSAEVVAFVQRLRDEDLYKKPGVAETIDWAKCLLALDVVNLSPEVISDTLGALLKYQ DDIQKLQNAQAKRILDDARASLSP" gene 502351..503613 /locus_tag="SKA53_02621" CDS 502351..503613 /locus_tag="SKA53_02621" /note="COG3552 Protein containing von Willebrand factor type A (vWA) domain" /codon_start=1 /transl_table=11 /product="VWA domain containing CoxE-like family protein" /db_xref="CDD:12879" /translation="MKSPAYAPLALPDDPKLAGNITHFARALRKAGVKLGPGRVIEAI NAVQAVGFTERADFFWTLHACFVSKPEDSAIFAQLFRLYWRDPQYMEQMMSLLTPMVH GVQQDRVAEAAEKRAAQALLDGREPPAPEAQAREDEIEIDIDASQTASAEERLRQLDF EQMSTAEMAAATRMLAGLRLPVPPILTRRRQALPGPLADWQRTMRRAARQGGEIGKLA TARKRMRYPNLVVLCDISGSMSSYSRAVLHFVHAVANREGQGWAQVHAFTFGTRLTNI TRHMRRRDVDAALAAAGAQAQDWEGGTRIGACLHDFNRDWARRVAGQGAVVLLITDGL DRDATHDLGREMERMQLTFSQLIWLNPLLRWDGFAPLARGIAQMLPYCTSFRAAHNVA SLAGLAAALTRPDDGGEKRRMLAALHGS" gene 503610..504611 /locus_tag="SKA53_02626" CDS 503610..504611 /locus_tag="SKA53_02626" /note="COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family" /codon_start=1 /transl_table=11 /product="XdhC/CoxI family protein" /db_xref="CDD:11683" /translation="MTHATGGLSKGKTMTNDPAALALHWAQTGRKVALATVIATWGSA PRGVGSQLVIDADGAMEGSVSGGCVEGAVVLAAMDAITAGQHAILEFGVSDDAAFAVG LACGGQIKVLVQPVGDGLTIKTLQALAEARATARPIGLTTDLATGISRVITAADAPER FRLDRAGLDDDGTFITIQNPPLRMIIVGAVHIAQPLVGMARACGYAPVLIDPRGAFGS DARFPGETILEDWPDEALAALKPDARTAIVTLTHDPKLDDPAIMAALRSDVFYLGCLG STRTHAKRVARLQAAGFTDADIARIHAPVGLDIGGRQPAEIALSIMAQITQTLRHAR" gene 504608..505588 /locus_tag="SKA53_02631" CDS 504608..505588 /locus_tag="SKA53_02631" /note="COG0303 Molybdopterin biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="molybdopterin biosynthesis protein" /db_xref="CDD:10177" /translation="MKFGPVPVADALGAILAHAVPAGATLLRKGKLLEPADIAALQGA GVRQVTVAMLDPGDLDENAAAAKLARALVGAHVTVSAAATGRVNLFAQVAGILSLDAA AIGRFNALNPMITLATLPLHSRVAAGNMIATIKIISYAVPEADVDRAADMAAALAVLP PVYHRATLIETRLGEPQPIKGRTALAKRLARFDIALDERCIVSHEINDLAAALDAASG EVIFILTASATSDIDDVGPAALRAAGGKVSQFGMPVDPGNLLFLGDLRGKPVIGLPGC ARSPALNGADWVLERVVCGRMPTPADIAAMGVGGLLKEIPDRPQPRRQIG" gene 505677..506162 /locus_tag="SKA53_02636" CDS 505677..506162 /locus_tag="SKA53_02636" /note="COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /codon_start=1 /transl_table=11 /product="carbon-monoxide dehydrogenase, small subunit" /db_xref="CDD:11788" /translation="MASVAMVVNGKSITREVEGHTLLVDFLRDDLRLTGTHVGCDTSQ CGACVVHVNGQSVKACAMFAIEADGADVATIEGQANKDGSLNVIQQAFQDHHGLQCGF CTPGMVMTAAALLKENPKPTEAEVRSYLEGNICRCTGYHNIVKAIMAASGQDVTAIAA E" gene 506225..508594 /locus_tag="SKA53_02641" CDS 506225..508594 /locus_tag="SKA53_02641" /note="COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /codon_start=1 /transl_table=11 /product="Putative carbon monoxide dehydrogenase large chain" /db_xref="CDD:11243" /translation="MPKDTGIGASDKRREDIRFLTGAGHYTDDIKHYGATTAIFCRST VANGIIKSIDTSAAEAMPGVLAIFTGADFADVGGNPAGWLINSRDGTPMKEPKRPVLA HGKVRHVGDAYAAVIAETELQARNAAEAIVAEIEELPAIVDMAAALAGDAFVHDEIGT NQCFDWGWIEDNRAATDAAIKAAPHVTTLELVNNRLVPNAMEPRCSIGSYDAGNDSYI LQTTSQNPHLTRLLISAFVMGIPENKLTVIAPDVGGGFGSKIYHYGEEALVLAAARKI GRPVKWTADRTEAFLTDAHGRDHVTKIELACEKDGTFIAFRTETMANVGAYLSNFSTA TPTFLHGTLMAGNYTVPNVYVNVKAVFTNTAPVDAYRGAGRPEATYSIERVIDKAARE LGIDPIAIRRKNFVKPDQYPFTSAAGLEYDSGNYDALMDTLEKHIDRDGFAVRRKASE ARGMLRGLGLNAYIEACGIAPSNLVGVLGSRVGLYDAATVRVNATGNLSVMVGAHSHG QGHETVFPQIVGEMLGIDPASIDIVHGDTSKIPFGMGTYGSRSLAVCGSAMVRATEKI IAKAKKIAAHMLEASADDVDFKDGQFTVKGTDKSVSFGEVALKAYIPHNFPIEDIEPG LEETAFYDPANFTYPSGAYACEVEVDPDTGKVRVDRFVAVDDFGNIMNPMIVTGQVHG GLGQGIGQALLEGARYDDDGQLLSASYMDYTMPRADDLPFYTVDHANGTPCTHNPLGV KGCGEAGAIGSPPTIVNAVVDALQSAGKNVTHIDMPLTPLRVWDAMQNA" gene 508607..509398 /locus_tag="SKA53_02646" CDS 508607..509398 /locus_tag="SKA53_02646" /note="COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs" /codon_start=1 /transl_table=11 /product="putative carbon monoxide dehydrogenase medium chain" /db_xref="CDD:13774" /translation="MYAFEIERPGTIADAVKALQSDGAQALGGGQTLIPTLKARLAAP DVLVSLSAIGEMQGVCLSDDGALCIGAATTHATVARDAAAHFAGLAHLASHIGDPAVR NRGTIGGSLANNDPAACYPAAVLGTGAVIITNTRQIAADDYFQGMFTTALDEGEVITE VRFPIPQKSHYMKFVQPASRFALVGVFVAKYADGVRVAVTGASEEGVFRWHEAEAALS ADFSPKALDALSVDADGMIGDLHGTPAYRAHLVKVMTGRAVTAAT" gene complement(509624..510034) /locus_tag="SKA53_02651" CDS complement(509624..510034) /locus_tag="SKA53_02651" /note="COG0290 Translation initiation factor 3 (IF-3)" /codon_start=1 /transl_table=11 /product="translation initiation factor" /db_xref="CDD:10164" /translation="MQMAEEAGLDLVEISPNAVPPVCKIMDFGKFKYETQKKEAEARK KQKIIEIKEIKFRPNTDSHDYEVKMRSVFKFLENGDKVKITLRFRGREMAHQELGRQL LERVAEDTKETGKVENFPKMEGRQMVMLIGPLSK" gene complement(510474..511340) /locus_tag="SKA53_02656" CDS complement(510474..511340) /locus_tag="SKA53_02656" /note="COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1" /codon_start=1 /transl_table=11 /product="ferredoxin--NADP reductase" /db_xref="CDD:10746" /translation="MGHDEHMTEQSPVNHASAKIVPQLPDMQTVTEVKHYTDRLFSFR VTRPASLRFRSGEFVMIGLMGDEDPETGKRKPIMRAYSIASPSWDEELEFYSIKVQDG PLTSKLQHIQPGDGLILRPKPVGTLVHDALLPGKRLWFFATGTGFAPFASLLREPQTY EDYDEIIITHTCRELGELTYGRDLIEGLKTDELLNEVIGDGFWKKIKYYPTTTREDSP KMGRITDLMRSGEAFSDLGVPVLSPGTDRAMICGNLAFNLELKEMLESYGLNEGANSN PQQYVVEKAFLD" gene complement(511387..511797) /locus_tag="SKA53_02661" CDS complement(511387..511797) /locus_tag="SKA53_02661" /note="COG3749 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24946" /translation="MSIIVTDTGFAADDWTGPFRDAAQTIANDCAYAVDIASDTDPAT LARLTNAPMIRIDFPSFADGRGFTLAAMLRRAGYQGRLRARGHVIADQYAMARRAGFD EVEIDDTMAARQPQSQWLARADWQQNHYQARLRS" gene complement(511794..512513) /locus_tag="SKA53_02666" CDS complement(511794..512513) /locus_tag="SKA53_02666" /EC_number="1.8.4.8" /note="COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes" /codon_start=1 /transl_table=11 /product="phosphoadenosine phosphosulfate reductase" /db_xref="CDD:10050" /translation="MPLDDLADHRNALHRDSDALAVLRAALNDTQIGPVALVSSFGAE SVVLLHLAAQIDTAVPVIFLDTEMLFPESLAYQRDVAKALGLSDVRIITPDRNAILRE DVDGLLHQADTDACCDLRKARPLEQALQGFGGWITGRKQFQNGQRASLPLFEPDGARI KINPLAHWSSDDLRAYMTDHSLPRHPLVAQGYPSIGCMPCTTRVGAGEDPRAGRWRGS EKTECGIHFENGRMVREGKAA" gene complement(512503..514203) /locus_tag="SKA53_02671" CDS complement(512503..514203) /locus_tag="SKA53_02671" /note="COG0155 Sulfite reductase, beta subunit (hemoprotein)" /codon_start=1 /transl_table=11 /product="Sulfite/nitrite reductase hemoprotein subunit" /db_xref="CDD:10030" /translation="MIRDGDRTKQMYVYNDFDETFVRTRVAQFRGQVERRIDGSLTED EFKPLRLMNGLYLQLHAYMLRVAVPYGTLNPAQMRQLAMIADRWDKGYGHFTTRQNIQ YNWPKLGDVPDMLEALADVGMHAIQTSGNTIRNVTADHFAGAAADEIEDPRAIAELLR QWSTDHPEFQFLPRKFKIAVTGAAADRAVTRAHDIGLVVVRNDAGEVGYQVIVGGGLG RTPMVGKVLRDFVSKADLLPYVEAIVSVYNLLGRRDNKYKARIKITLHENGIETIRDL VEDRFNAIRAGFGGYDQTLLAEIEKSFAPPAFVTKATDGYEAARLANPAFRSWTDTNL SAHKAAGYAIVSISIKKHGATPGDATSDQMRVMAELADRYGHGELRISHEQNVILPHV HQSDLPAVYAALRKADLATANIGLASDIIACPGMDYCALATARSIPIAQQIATRFDEL KIEHDVGPLKIKISGCINACGHHHVGHIGILGLDRAGVENYQITLGGDGSEMTTIGER AGPGFSADDIVPAIERLVTGYLDLRRDPSETFLQTYRRLGLAPFKTLLYPSEDKADAA " gene complement(514200..514511) /locus_tag="SKA53_02676" CDS complement(514200..514511) /locus_tag="SKA53_02676" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPPRFTPKVVTANALLDGDAVWLTEDDHWSPLMSRAELITDEAH ADLRLLQAKARASEIAGAYLADARLGADGPEPVHFREAFRTRGPSNYPHGKQVETPPQ T" gene complement(514511..515902) /locus_tag="SKA53_02681" CDS complement(514511..515902) /locus_tag="SKA53_02681" /note="COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)" /codon_start=1 /transl_table=11 /product="siroheme synthetase [Rhizobium leguminosarum" /db_xref="CDD:9883" /translation="MQHFPIFLAVAGRRIVLSGGGDAAMAKLRLLMKTTAHLTVIAPD VTPEISAWAAAGKLRIINRAMEPGDTLCAALFYAANEDDAEDARVAAIAHADGALVNI VDNLADSQFITPAIVDRDPVVVAIGTEGAAPVLARAIKADIEERLPVSLGVLARIGKT FRHAVDVLPMGRKRRDFWADFYFQHGPKAMGTAGEAGIIPALETLLDNHITARSKAGH VDLVGAGPGDPELLTLKARNALDKADVVIHDNLVTAEILELARREAIIIDAGKQGFGR AMPQDQINALIVQHALDGHHVVRLKAGDPTVFGRLDEEISAIIDAGVSYTIVPGITAA SAAVAGIGQSLTQRGRNSAVRFITGHDTRGYADHDWRALAAPGEVAAIYMGKRAARFI QGRLLMHGADPATPVTIIENASRANQRVIATCLVELEPTLTRAALTGPVITFYGLAPR DAAAAAIKIKEFA" gene 515982..516500 /locus_tag="SKA53_02686" CDS 515982..516500 /locus_tag="SKA53_02686" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family" /db_xref="CDD:1588" /translation="MFQVAPKTDHASLNDRKTGMALRIDATDRKILAALQADAAQSLD DIAKTVGSSKTPVWNRIRKLREAGVIGQQTVILDAEKLGFEACFFVLIRTSEHDKDWQ ARFLAALKSRPEVQEAHRLAGDIDYILKVRVKNARAYDTFYQALISEVKVHNVTALLS MEEIKSTVALPL" gene complement(516578..517795) /locus_tag="SKA53_02691" CDS complement(516578..517795) /locus_tag="SKA53_02691" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="Cytochrome P450 hydroxylase" /db_xref="CDD:11832" /translation="MCSAPIAKIAAARQSCAMQHLTQSPTDPAFVQNPYPFYDRARQT GDFFWWDDYAMPCAVSHKAVHAVLRDRRMGRECPPELARAIPDALRPFYDIEAHSMLE LEPPRHTRLRALVLRAFTSRTIAALAPQITQLCHDLIDRFPDEPFDLLTAYAQPVPVI TIARLLGVPEDRADDLLAWSNAMVAMYQARRTPEIEAAAITASTDFSDFMRGYVATRR KTPADDLISTLIAAEEQGEKLTTEELITTCILLLNAGHEATVHTLGNGTKTLLEHNIR GITDACVEEVIRHDPPLHMFTRWVYEDVQIGDQRFKRGDQIACLLGAANRDPAVYPDP ARFDPTRSGPQNTSFGGGIHFCVGAPLARLELKIALDVLFTRCPDLRLTAPPSYGDVY HFHGLTGLMVATR" gene 517923..518759 /locus_tag="SKA53_02696" CDS 517923..518759 /locus_tag="SKA53_02696" /note="COG5012 Predicted cobalamin binding protein" /codon_start=1 /transl_table=11 /product="Coenzyme B12-binding" /translation="MFMAKTSLDDGVFDRSAYQNAKRQLRLVETELPQNAVSSLAREV VRRLAFRMPRHENAADLPTQSEIDLLCAALLSADDTAADQFILAARRDGVDVGAISRG YVAGAARKLGQMWDDDRISFIDVTLACGKLYGIIRGLRHVLAPQIIQGRETRPALFAL VPGETHTLGIEIATDHFRRDGWDVDMLMGLDHDAMVSEADLRHYEAIVLVANSDRMLE PLTRLSLALRITQPLAHIIVAGGILDHHPDILHLVGAEAVMADLDTAIATLRDVLGPA KT" gene complement(518756..519484) /locus_tag="SKA53_02701" CDS complement(518756..519484) /locus_tag="SKA53_02701" /note="COG0149 Triosephosphate isomerase" /codon_start=1 /transl_table=11 /product="Triosephosphate isomerase" /db_xref="CDD:10024" /translation="MRRKLAAGNWKMNGLRADLTQLATLAEQRGYDVDVLICLPATLI GSCAGLPIAIGAQDCHTATHGAHTGDISAAMLADVGATHVITGHSERRTDHHETDAIV AAKSRAAHDAGLITIICIGETLVQREAGTTLDVIDAQLAGSVPDCATADNTVIAYEPI WAIGTGKVPTTDQIAQVHAHIHARLTARFADGAGFGILYGGSVKGDNAAAIFAVPHVT GALVGGASLKAVDFTPIIAALAAS" gene complement(519505..519867) /locus_tag="SKA53_02706" CDS complement(519505..519867) /locus_tag="SKA53_02706" /note="COG0316 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster assembly accessory protein" /db_xref="CDD:10190" /translation="MFGIPGKQAVTITEKAATQIARLMAKDGHQGLRIGVKKGGCAGM EYTMAYVTDIDPLDEVVEQQGARVMIAPMAQMFLFGTEIDYETSLLESGFKFRNPNVV DACGCGESIKFAENIASR" gene complement(519943..521148) /locus_tag="SKA53_02711" CDS complement(519943..521148) /locus_tag="SKA53_02711" /note="COG0584 Glycerophosphoryl diester phosphodiesterase" /codon_start=1 /transl_table=11 /product="Glycerophosphoryl diester phosphodiesterase" /db_xref="CDD:26006" /translation="MTRLSLTLLATLAGTTAIAETALTYGPRPAYLVSQMTDSPLKEQ LLACADQTPMRSDFSIGHRGAPLMFPEHTVESNVAAAQMGAGILECDVTFTADLELVC RHAQNDLHTTTNILVTPLADKCTAGFSPANGDTRASAECRTSDLTLAEFQTLDPKMDA ANTAATTAADYLNGTANWRTDLYATNATLMTHAESIALFRDLGAKFTPELKSPSVEMP FNGFSQEDYAQKLVDEYKAAGIPASDVWLQSFNLDDVLYWIKNEPAFGAQAVYLMDEY ETVDGYTPHDPATWPNTMEELKAMGVNIIAPPTWMLVTLQDGKIVPSALATAAKAADL QIITWTLERSGPLHTGGGWYFQGVNDAITNDGAYFEVLDVLAQDVGVIGVFSDWPATT TYYANCMGL" gene complement(521234..521596) /locus_tag="SKA53_02716" CDS complement(521234..521596) /locus_tag="SKA53_02716" /note="COG2151 Predicted metal-sulfur cluster biosynthetic enzyme" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:17065" /translation="MIDANAQLEGAPLIAPSTTDHPLYDDVVQACRSVYDPEIPVNIY DLGLIYTIDIKDDNAVNIVMTLTAPGCPVAGEMPGWVADAIEPLPGVKQVDVEMTFEP QWGMDMMSDEARLELGFM" gene 521727..522857 /locus_tag="SKA53_02721" CDS 521727..522857 /locus_tag="SKA53_02721" /note="COG0343 Queuine/archaeosine tRNA-ribosyltransferase" /codon_start=1 /transl_table=11 /product="queuine tRNA-ribosyltransferase" /db_xref="CDD:10217" /translation="MTQRFSFDLHATDGKARTGAISTPRGVIRTPAFMPVGTAATVKA MLPESVAATGADILLGNTYHLMLRPTAERIARLGGLHKFMNWDKPILTDSGGFQVMSL AGLRKLTEEGVTFKSHIDGSRHHLSPERSMEIQALLGSDIVMCFDECPALPADRDRIK SSMDLSMRWAQRSRDAFGDRPGHALFGIQQGGLEQDLREESAQALQAIGFDGYAVGGL AVGEGQEAMFGVLDYAPDQLPVDKPRYLMGVGKPDDIVGAVKRGIDMMDCVLPSRSGR TGQAFTRHGVVNIKNARHQDDPRPLDEACTCPACRGYSRAYLHHVFRANEMISGMLLT WHNLHYFQQIMAGMRDAISAGTFAAWEADFHALRAQGDIDPL" gene 522972..525380 /locus_tag="SKA53_02726" CDS 522972..525380 /locus_tag="SKA53_02726" /note="COG0466 ATP-dependent Lon protease, bacterial type" /codon_start=1 /transl_table=11 /product="Probable ATP-dependent protease La protein" /db_xref="CDD:10339" /translation="MQEPLSSSYPVLPLRDIVVFPHMIVPLFVGRDKSVRALEEVMQD DKQILLSSQIDPGQDDPDQDGIYKSGVLANVLQLLKLPDGTVKVLVEGRSRVRITGFL PNDSFFEASAEYLTEESGDPTEVEALVRNVAAEFERYAKVKKNIPEEAMAAVSDATEP AKLADLVAGHLGIEVAQKQGLLETLSVAERLEKVYGMMQGEMSVLQVERKIKTRVKSQ MERTQREYYLNEQMKAIQKELGDGEDGQNEVAELEARIHDTKLSKEAREKVDAELKKL KSMSPMSAEATVVRNYMDWILGLPWNVKSRTKKDLHKAQAVLDADHYGLEKVKERIVE YLAVQQRSAKLKGPIMCLVGPPGVGKTSLGKSVAKATGREFIRISLGGVRDESEIRGH RRTYIGSMPGKIIQALKKAKTTNPLILLDEIDKMGNDFRGDPASAMLEVLDPEQNATF VDHYLEVEYDLSNVMFLTTANSYNMPGPLLDRMEIITLSGYTEDEKVEIAKQHLLPKV MQNHGLKAREFSVSDDALLAMVRVYTREAGVRNLERELAKLARKAVTRIVKKEAEAIT ITAANLTDFLGVEKHRFGLAEEKDQIGVVTGLAWTSVGGELLNIEALRLPGKGRMKTT GKLGDVMKESIDAASSYVRSIAPEIGVKPPKFDTIDIHVHVPDGATPKDGPSAGLAMV TSIVSVLTQIPVRRDIAMTGEVSLRGNAMPIGGLKEKLLAALRGGITTVLIPQDNAKD LPDIPDNVKEGLTIIPVTHVSQVLEHALVRKPEPIEWDEAAEEAAAAAAIKSGTAPEA ARTH" gene 525411..525818 /locus_tag="SKA53_02731" CDS 525411..525818 /locus_tag="SKA53_02731" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQKARLSPAKALAPRAKPAKLPLIATGQTMARADSSASETAAPM PLKKPDLLDQLATRSGLKKRDAKLALDATLALIGEALARGDDLLLPPLGRVRVVKAKD LGAGAQLLTLKLRSGKDASQSGKTGLATAVEDV" gene 525832..525903 /locus_tag="SKA53_t03227" tRNA 525832..525903 /locus_tag="SKA53_t03227" /product="tRNA-Val" gene 525969..526532 /locus_tag="SKA53_02736" CDS 525969..526532 /locus_tag="SKA53_02736" /note="COG0406 Fructose-2,6-bisphosphatase" /codon_start=1 /transl_table=11 /product="phosphoglycerate mutase" /db_xref="CDD:16692" /translation="MTFPEIYILRHGQTEWNAENRMQGALNSPLTAQGAADAARQGAI LAQRDLTGFQFWCSPQGRAVQTAGIALARIAAHIHTDHRLREIGVGDWAGLLRDTLPM PDGPDPVAAQYAMAPNGEGFAALETRCRSFLADLNAPAVLVTHGITSRVLRRILAGDA AIAVSTAHGGQGRVYHIKDGIQHLLEA" gene 526647..526719 /locus_tag="SKA53_t03229" tRNA 526647..526719 /locus_tag="SKA53_t03229" /product="tRNA-Val" gene 526813..526920 /locus_tag="SKA53_02741" CDS 526813..526920 /locus_tag="SKA53_02741" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSPVAVGSVAPPILVNQKLMAARGMMDLVNLCGGR" gene 527188..527261 /locus_tag="SKA53_t03231" tRNA 527188..527261 /locus_tag="SKA53_t03231" /product="tRNA-Asp" gene 527374..527447 /locus_tag="SKA53_t03233" tRNA 527374..527447 /locus_tag="SKA53_t03233" /product="tRNA-Asp" gene complement(527492..528871) /locus_tag="SKA53_02746" CDS complement(527492..528871) /locus_tag="SKA53_02746" /note="COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /codon_start=1 /transl_table=11 /product="ArgE/DapE/Acy1 family protein" /db_xref="CDD:10494" /translation="MSLDPVLDRIDADLPQAVERLKELLRIPSISTDPAYKADCDMAA DWLVADLVAMGFAASKRPTPGHPMVVAHAAGDGPHVLFYGHYDVQPVDPLHLWNRDPF DPQVEDTPKGKVIRGRGTSDDKGQLMTFVEACRAWIAVHGSLPAKMTLFFEGEEESGS PSLVPFMQDNAKELTADIALICDTGLYGDSTPAIITQLRGLLGEEITITGPDKDLHSG MYGGLAMNPARVLARVIAALHDEDGRITVPGFYDGVPDLSNELAAAWDDLRFDEAAFL GDVGLSIPAGEKGRRPLEMIWSRPTCEVNGMWSGYTGDGFKTVLPSQAHAKISFRLVG TQDPLAIRAAFRKMVQDMIPADCSVTFAAHGASAAGQMTTTHPAFAQARRALSDEWPQ AAAYVGSGGSIPIAAYFKQILDMDAMLIGFGKNDDQIHSPNEKYDLSSFHKGIRSWAR ILHAMTQTA" gene 529144..530370 /locus_tag="SKA53_02751" CDS 529144..530370 /locus_tag="SKA53_02751" /EC_number="2.3.1.37" /note="COG0156 7-keto-8-aminopelargonate synthetase and related enzymes" /codon_start=1 /transl_table=11 /product="5-aminolevulinate synthase" /db_xref="CDD:10031" /translation="MVDYNAQLDTAINRLHDEGRYRTFIDIERKRGQFPHATWVKPDG SEMPVTVWCGNDYLGMGQHPVVLAAMHEAIEATGAGSGGTRNISGTTVYHKRLEAELA DLHGKGAALLFTSAYIANDATLSTLPKLFPGLIIYSDMLNHASMIEGVRRNGGAKRIF RHNDVAHLRELLAADDPAAPKLIAFESIYSMDGDFGPIAAFCDLAEEFGALTYCDEVH AVGMYGPRGAGVAERDGVMHRIDIINGTLAKAYGVMGGYIAASPKMCDAVRSYAPGFI FTTSLPPAVAAAAAASVAHLKKDQALRDSHQMQAKILKLRLKGLGLPIIDHGSHIVPL IVGDPKHTKKLSDMLLSEFGIYVQPINFPTVPRGTERLRFTPSPVHGSREMTALVGAL DGLWSHCALNRAELAG" gene 530486..531691 /locus_tag="SKA53_02756" CDS 530486..531691 /locus_tag="SKA53_02756" /note="COG1426 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11140" /translation="MGKTFRRASVAQDVQTRGFDDYALRLGDIMRGERATLGKSLLDI QRELKIKAAYIAAIENADPSAFDTPGFIAGYVRSYARYLGMDPDAAFATFCKESGFAT AHGMSEQASSLKNRVADTSRVSAGKDIFLSSRTPFVPARESVFAQLELRAIGSVLVLI TMIAGLGYGGWTVLQEVQRVQFAPVEQAPVVVSELDPLAGGGNGFNVPGDALADVTLP SPDALDRLYRPQALDVPVMVARDTPIATLTPRMIGALASGQDDSAVAMVAADLPIAQP DTLPTPSIQVVEPPAPQVQLVAARPAWVRVQAADGVVLFEGIMEPGQNFVLPATEDPA ILRVGESGAMYFAVNGQHYGPVGQRGVVTSNVVLSVDNLTASYALADLASDADLAEII RVAEAVTDQ" gene 531761..532888 /locus_tag="SKA53_02761" CDS 531761..532888 /locus_tag="SKA53_02761" /EC_number="1.17.4.3" /note="COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis" /codon_start=1 /transl_table=11 /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase" /db_xref="CDD:26268" /translation="MMSLNHIRPWRNIYRRKSRQIMVGNVPVGGDAPISVQTMTNTLT TDIKGTIAQVQAAADAGADIVRISVPDEASSKALREIVRNVSVPIVADIHFHYKRGIE AAEAGAACLRINPGNIGDEKRVKEVIRAARDNNCSIRIGVNAGSLEKHLLDKYGEPCP DAMVESGLDHIKILQDNDFHEFKISCKASDVFMAAAAYQQLADATDAPIHLGITEAGG LISGTVKSAIGMGNLLWMGIGDTIRVSLSADPVEEVKMGFEILKSLGLRHRGVNIISC PSCARQGFDVIKTVEALEKRLEHIKTPMSLSIIGCVVNGPGEALMTDVGFTGGGAGSG MVYLAGKQSHKQSNADMIEHIVEQVEKKAAEIEAKGDLAAE" gene 532934..534079 /locus_tag="SKA53_02766" CDS 532934..534079 /locus_tag="SKA53_02766" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="aminotransferase, classes I and II" /db_xref="CDD:10310" /translation="MRHATRGDVDPFIVMDVMEAARQAEAAGRHIIHMEVGQPGTGAP KAACDQLIADMANPLGYTVGLGLPDLRARIARHYGDWYGLDLDPARVVITSGASGAFL LAFSALFDNGERVGLGTPCYPSYRQILRAVGLTPVDIPTSLVDRFQPQPQHVAAHDLA GLIVASPANPTGTMLDAPQLAALAEACAARDAALISDEIYHGIDYDLRPVSALSVTDE VYVINSFSKYFSMTGWRVGWMVVPDDHVRRIERLAQNMFICAPHAAQRLALHAMNCAP ELDANKAVYAANRALMMDGLRAAGLGAFAPPDGAFYIYVDVSAYTDDARAFAAEILDQ AGVAVTPGLDFDAARGHHWLRFSYARGTADIIEGLDRIARFMQARRA" gene 534076..535236 /locus_tag="SKA53_02771" CDS 534076..535236 /locus_tag="SKA53_02771" /note="COG0860 N-acetylmuramoyl-L-alanine amidase" /codon_start=1 /transl_table=11 /product="N-acetylmuramoyl-L-alanine amidase, family 3" /db_xref="CDD:10726" /translation="MIRWIVLCCLLATSAGAQARFDPERSDIRDGWRSVQIVLGLSDI VPYRIFTLDDPRRLVLDFQGLDTGGASASPINSARRVTDIRFGPYRPGWTRMVLDLSE PLTLAKAEMTRDAQGAQLTLRLARTTADDFAAAAGAPPDPGWDALSEAALRGLEQRQS GAFIVVLDPGHGGVDPGAERNGITEAHLMLEFAAEIAGQLRAQDGVAVVMTREADVFV PLFTRMSIARRARADLFISLHADALEHDDAWGASVYTLSEDSDDIAMELLVERHERGD LLAGVDLSVTDDRVTGVLMDLARQTTSPRAASFADHVIAQMQAQGVRLNAKPRRTGRF SVLLAADFPSVLIEAGFLSNTQDRQTLTDPQSRARLVAAITQAVAQYRSDMP" gene 535299..537878 /locus_tag="SKA53_02776" CDS 535299..537878 /locus_tag="SKA53_02776" /note="COG5009 Membrane carboxypeptidase/penicillin-binding protein" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 1A" /db_xref="CDD:14139" /translation="MTPTQAARISTRNPERNDRPVLRFIFSFFGGIFTFLTMGLVMAA LGLGGVIFLYGRDLPSYETLSQYTPKTISRIYSREGRIIDEFAVERRLFTPAEDIPDL VKQAFISAEDKNFYTHQGFDATSMLSAVIDAVQSRGEDLRGASTITQQVMKNFLLDGS RSVERKIKEIILAVRIEQAMSKERILELYLNEIFLGQNSFGVTAAALTYFNKPLTDLT AGEAAYLASLPKSPSNRHPVRDQEAAIFWRDNTLRLMHQNGYIDDITLAVETGSPLRT VQGGDYADFRTTLPDRDYFTDEIRRQLSQDFGQEEFFSGGLSIRATVDPELQKVAAQS LQQALEDFDRARGVWRGTGLTIAPEALADEAAWRAALRATDLPRDVMLGGQWHPAVVL AVAENSLRIGIEGLPASEAEPHVVPRRDIEWMRGNFFDNFTPGDVVHVRRIVQDSDGS FLRWSLRQVPEVQGAFMAMDVNTGRVIAMQGGFSYQASVFNRATQAQRQPGSSFKPFV YATALDSGYSPATIVVDAPIEIMTPQGLWRPTNASNQFYGPTPLRTGIERSRNLMTVR LAQEVGIDRIAEYAERFGVYDRMNPVLAASLGSDETTLFKMVAAYAMFANGGERVAPT LVDRVQDRFGNTVYLHDDRQCPDCANLTLPAGQAPLILSNRTRVMNEVTAYQLTSMMQ GVVERGTAAGSVNLPAQIAGKTGTTNDSKDVWFVGFSSNIVAGCYIGYDNPRSLGSGA SGGGMCGPVFNRFMTEAIDVFGAPPFRVPDQCQFIKIDRFSGARLPDDALGDNVVAEC FRAGEEPVFGIMYDGGFAMAADLPLYDEVPRSQREVTTSTGDTATVGERATFGTLSTG GLY" gene 537942..539066 /locus_tag="SKA53_02781" CDS 537942..539066 /locus_tag="SKA53_02781" /note="COG1186 Protein chain release factor B" /codon_start=1 /transl_table=11 /product="peptide chain release factor 2" /db_xref="CDD:10904" /translation="MRAETQNNVDAIQKSLNLLAQRMDYETARYRLEEFDARVEDPTL WDDPDAAQKLMRDRQVLVDTLTMHDTIKQELADNIELIEMGEMEGDADIITEAEEALK SLREKAAQKELEALLDGEADANDTFLEVNAGAGGTESCDWANMLSRMYVRWAEKKGYK VELQSMQSGDEAGIKSVTYKIMGHNAYGWLKSESGVHRLVRISPFDSAAKRHTSFTSV KVYPVVDDNIEIEVNPSDIRLDTYRSSGAGGQHVNTTDSAVRITHFPTGIVVTSSEKS QHQNRDIAMKALKSRLYQMELDKRSALVNEAHENAGDAGWGNQIRSYVLQPYQMVKDL RTGFETSDTKGVLDGDLDGLMGATLALDMSGKGRDAANAD" gene 539112..539915 /locus_tag="SKA53_02786" CDS 539112..539915 /locus_tag="SKA53_02786" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14557" /translation="MTQTGMISHSATPQVRDLALADLRAALLAGIKDFRRTPQFGLFF SAVYVLGGFGMLSLGAGHVTWTLATSLGFPLIAPFAAAGLYEVSRRIETGQPLSWRAV LAIVWQERTRQLPWLGAIIVIYFLFWTFLAHMIFALFMGLSTMTNVSQSWEVFLTPTG LTMIAVELAVGAVLAFLLFALTVVSLPLVLEREVDFVTAMLISLAVVRQNPSVMLCWA GLIAALTLLALLPWFVGLIVVLPVLGHATWHLYRRALDFDEKGRHKGRP" gene complement(539940..540440) /locus_tag="SKA53_02791" CDS complement(539940..540440) /locus_tag="SKA53_02791" /note="COG1664 Integral membrane protein CcmA involved in cell shape determination" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15816" /translation="MFSKSKINEPGPKVADSPAATTVDASKTGSPVPDFKTSPPKAKP PASMLSSDLLITGNLKTTGDIQIEGQVDGDIRAHLLTVGESATVKGEIIADDVVVNGR VIGRVRGLKVRLTSTARVEGDIIHKTIAIESGAHFEGSVQRQDDPLSSGGQKMPVLPT AEGDKA" gene complement(540430..541722) /locus_tag="SKA53_02796" CDS complement(540430..541722) /locus_tag="SKA53_02796" /note="COG0739 Membrane proteins related to metalloendopeptidases" /codon_start=1 /transl_table=11 /product="peptidase, M23/M37 family" /db_xref="CDD:10607" /translation="MKPIHATLERWFPEKRLFLRSDTETRFIRLSSETQLVAWAGSTI VVGWTIVATAILLMDSIGAGNFRAQAQRDQMTYEQRLNILSSDRDNRAAEAASAHARF EMALEQISIMQSELLATEEKRRELETGLEVVQTTLRTTMKAREEARQQVAMLTATGDD GTPLSMPDEAVGTVNLLASALAETAAERDQIADDAGMAIEQAAEMQLELRLLQERNDQ IFRQLEEAMLVSVEPLDNVFRAAGMNPDTLIEQVRRGYSGTGGPLAPIEFTAATGEPD PDSLRANAILASMDRINLYRIAADKLPIAMPVRSNYRLTSGFGQRWGRLHAGTDFAGP VGTPIHAAADGVVVKAGWESSYGRLITIRHDFGLETRYAHLNTIDVRVGQRVSRGDRI GAMGNSGRSTGPHLHYEVRVNGNPVNPMTYIRAGQNVF" gene complement(541948..542415) /locus_tag="SKA53_02801" CDS complement(541948..542415) /locus_tag="SKA53_02801" /note="COG1225 Peroxiredoxin" /codon_start=1 /transl_table=11 /product="AhpC/TSA family protein" /db_xref="CDD:10943" /translation="MTHPAIGDTAPAISLPRDGGDIVNLSDFAGKTVVLYFYPKDDTP GCTTEAIGFTQSVDDFAAAGAVVLGVSKDSVAKHAKFVAKHDLKIALLSDEAGDVCER YGTWVEKSMYGKTYMGIERATFLIGPDGKIAQVWPKVKVSGHVDAVLAAVKAL" gene 542493..545825 /locus_tag="SKA53_02806" CDS 542493..545825 /locus_tag="SKA53_02806" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGGESLPDPIPEPVPDQPQPADPVRALWPLSRVRLVLRGVLLVC LMPLVFALVAGVMIIDREITAPSWITAQVQDRGTEVLDGGRLRFAAISVRIGRDLHPT IRLIDTQLIDRNGALVTRIPVVEADLSPRGVILQRAVLVQQVRIIGAQINLRRARDGS LGLALGAGNQLRTRSLPEWLDEIDLFLDRPVFDALRTAQVSGLIVNYDDARARRNWTV DGGQVDLDMRGGQLTVQAELALLSGRADVTTALLSYASPRDSRAADLAVTINNIAASD IAAQSPALNWLRDVAAPLSATLRTTLDETGALGALRASLDIGAGVLQPTPASDPVGFS AARAELTYDPTLDLIRFSDIAVQSEWGSLQASGDAYLRDFADGLPRALLAQFQLRDVA LNPPGLFDVPPLIDGASVDLRLSLDPFVVDIGQAIVRDGASRVMAQGRIAATDAGWQV AVDAVIDALAPDRLRAVWPNGFRPGTRDWFDRNMLAGQLSDLHFGLRLEPGQPPIIAG HFSFADAAVRVMPALPPVTQARGTGHLIGHRFVIVVDNGMMIAPHGGPIQLDGTSFAI ADLRQKPGLATLDLQAQSRLPDLLSVINQPPFSFLDKAGLPVTIAQANAQAQGSVNWP LLKRTPREMVRFDIGVDLTDMRSDLLVPGRVLTAAGMQVTVDETGLSITGPVQLDGVA ADAQWTRSFARHAPRGSQLQAELMISDAALRAFGVALPPGMISGAAAARLQVTLQPDA PPQFVLTSDLDGLRLALPPIGWAKAAATKGDLRIEGRLGPVPEITRLSISGGGLQAEG RITMAAGGGLAQAAFSRLRIGNWLDAPVTLNGRGADQAPAIVVQGGMIDLRRARFGAG GGVQGGAGGSPVQIALDRLVVTEGLVLTGFRGDFTSVAGFIGQFSARINDSAAVTGTI APRAGRSAIRLRSDDAGNVLLASGLFRSAIGGTLDLTLLPAADAGTFDGVLAVRSVRV RDAPTIAALLDAISVVGLLQQMDGQGLSFDEVDVQFRLTPDEVIVSQASAVGPGLGIA VNGIYTLAAKGFDLQGVVSPFYLVNSIGAFLTRKGEGLVGFNFTIAGTPDAPRVSVNP LSALTPGLFREIFRRPPPELIQ" gene 545822..546877 /locus_tag="SKA53_02811" CDS 545822..546877 /locus_tag="SKA53_02811" /note="COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)" /codon_start=1 /transl_table=11 /product="S-adenosylmethionine:tRNA ribosyltransferase-isomerase" /db_xref="CDD:25921" /translation="MKLSDFDFDLPEALIATRPARPRSSARLLLAQGDRIADQIVTDL VDILQPGDRLVLNDTKVIPARLNGTRARSGEAGDTSARIEVTLLEPRADGSWSALVKP LKKLRDGEVVVFSADLSATMTGRGDGQAYLQFNLTGDDFDAALNAVGAMPLPPYIAAK RAADAADMDDYQTYWAKHAGAVAAPTASLHFDGPLLQALAARGVTMSYVTLHVGAGTF LPVKVDDVSEHKMHAEWGEVTATAAAQINATKAAGKRVIPVGTTALRLIESAAKGGQL QPWTGPTDIFITPGFTFQIADGLMTNFHLPKSTLMMLVSALMGMDRIKAIYAHAIAER YRFFSYGDASLLLPDRA" gene 546997..548220 /locus_tag="SKA53_02816" CDS 546997..548220 /locus_tag="SKA53_02816" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:11976" /translation="MFLLMVGNGLQGTLLGLRGEMEGFSTLALSVVMSAYFLGFLFSS RFTPELIRRVGHVRVFAAMGSMISAVLILYPTLVDPIAWTVGRVIMGFCFCGVYITAE SWLNDASSNANRGKALSLYMIVQMAGIVFAQYVVSIGDVSGYVIFIIPSVLVSLAFAP VLLSARPMPAFSATKPMKIKDLIKTSPLGCAGMFLLGGVFAAQFGMSAVYGSRVGLSV GEISFFISAIYVAALVLQYPIGWLSDRMDRRRLIIWIAMLGGLGSLIAFIVPGSFLLI ILSGAIVGGTSNPLYALLIAYTNDYLEKEDMAAASGGLLFINGLGAIMGPLIVGLMMD VIGDNGFWLFTAVLMLGVGIFGMVRATQRDRGALDLDQVPYAPVSAGSSAVAVGVAQE VYLDAASDEIAARTD" gene 548320..548901 /locus_tag="SKA53_02821" CDS 548320..548901 /locus_tag="SKA53_02821" /note="COG3803 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24914" /translation="MTREDEVLAFWLDECSPADWYKSDPDFDALIRDRFEQTWRDATE GSLGLWLTHATGTLAYIILTDQFPRNMFRDTAKAFSTDFLGLAAAKMAIDRNWDMKIA EPARQFFYLPLMHSETLSDQDRAVRLIHSRMPETGDNNRDHARAHRRIIRDFGRFPYR NAALGRRTSPAEQTFLDAGGYGFALRALQEKPA" gene 549002..550396 /locus_tag="SKA53_02826" CDS 549002..550396 /locus_tag="SKA53_02826" /EC_number="1.8.1.4" /note="COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /codon_start=1 /transl_table=11 /product="dihydrolipoamide dehydrogenase" /db_xref="CDD:10966" /translation="MAAKNFDLIVIGAGPGGYVAAIRAAQLGMNVVVVERENLGGICL NWGCIPTKAMLRSSEVFHLMHRAKEFGLSVEKVSYDLDAVVKRSRGVAKQMEGGVKHL LKKNKVTVIMGEATIPAKGKVSVKTEAGTEELTAKNIVLATGARARNLPGLEADGARV WSYRHALVPPHMPKKLLVIGSGAIGIEFASFYNTLGAETTVVEVMDRVLPVEDAEISA FAKKQFVKQGMVIMEKATVKQLDRAKDKVTAHIESGGKVETREFDTVISAVGIVGNTE GLGLEALGVTIDRTHVVTDEYCRTGVEGLYAIGDIAGAPWLAHKASHEGVMVAELIAG KHAHPVKPESIAGCTYCHPQVASVGYTEAKAKELGYTVKVGKFPFIGNGKAVALGEPE GLIKTVFDAKTGELLGAHMVGAEVTELIQGYVIGRQLETTEEDLMNTVFPHPTLSEMM HESVLDAYDRVIHM" gene 550574..553438 /locus_tag="SKA53_02831" CDS 550574..553438 /locus_tag="SKA53_02831" /note="COG0178 Excinuclease ATPase subunit" /codon_start=1 /transl_table=11 /product="excinuclease ABC subunit A" /db_xref="CDD:10053" /translation="MAELKYIAVRGAREHNLKNIDVDIPRDQLVVITGLSGSGKSSLA FDTIYAEGQRRYVESLSAYARQFLDMMEKPDVDHISGLSPAISIEQKTTSKNPRSTVG TITEIYDYLRLLFARAGTPYSPATGLPIEAQQVQDMVDRVMALPEGTRGYLLAPIIRD RKGEYRKEFLDLRKQGFQRVKVDGQFYELDEPPTLDKKFRHDIDVVVDRIVVRAGLET RLADSFRTALDLADGITVLETAPAEGEGAPERITFSEKFACPVSGFTIPEIEPRLFSF NAPFGACPDCDGLGVELFFDEQLVVPDVTLKISDGALAPWRKGKSPYFLQTIESIAKH YGFNKNARWKDLDPKVHNVFLRGSGSEEIKFRYDEGGRVYQVERPFEGVIPNMERRYR ETDSNWIREEFEAYQNNRSCGTCGGYRLRAEALAVKIGGQHVGQVVQMSIKEAYDWCL TVPDSLSKQKNEIAVAILKEIRERLGFLNNVGLDYLTLARNSGTLSGGESQRIRLASQ IGSGLQGVLYVLDEPSIGLHQRDNDRLLTTLKNLRDQGNTVIVVEHDEEAIREADYVF DIGPGAGVHGGQVVAQGTPAEIMANENSITGLYLTGKREIAVPKTRRKGKGKKITVVK ASGNNLHDVTADFPLGMFVCVTGVSGGGKSTLTIETLFKNASQKLNGARQTPAPCETI KGFEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKARGYKPGRFSFN VKGGRCEACQGDGVIKIEMHFLSDVYVTCETCKGARYNRETLEIKFKGKSIADVLDMT VEEAQGFFTAVPSIREKMDALMRVGLSYIKVGQQATTLSGGEAQRVKLSKELARRSTG RTLYILDEPTTGLHFEDVRKLLEVLHELVDQGNSVVVIEHNLDVVKTADHVIDIGPEG GDGGGRIVAVGTPEQVAEVAESHTGRYLKPMLTPRKVAAE" gene complement(553503..554369) /locus_tag="SKA53_02836" CDS complement(553503..554369) /locus_tag="SKA53_02836" /note="COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases" /codon_start=1 /transl_table=11 /product="3-hydroxyisobutyrate dehydrogenase" /db_xref="CDD:11792" /translation="MKIGFIGLGNMGAPMAANLARDHEVTGFDPVAQPTGLTLAPSAA AAAQDADVVITMLPDGNILRTVAAELHPAMKQGAIHLDCSTVDVDSARTVAAQAIAHG LYAIDAPVSGGIGGATNGTLTFMAGGPLPAFETVAPLFAIMGQKAVHCGAAGNGQAAK ICNNMILGVTMIATCEAFALADKLGLDRQAMFDVVSTSSGASWSMTSYCPAPGIGPVS PADNGYQPGFAAELMLKDLRLSQQAAEAAQADTPLGQAATALYARFVETEDGRGKDFS AMLPRFETRQRP" gene complement(554366..555388) /locus_tag="SKA53_02841" CDS complement(554366..555388) /locus_tag="SKA53_02841" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /db_xref="CDD:10752" /translation="MSDIIIRKDGRAGLITLNRPKALNALTWDMCLAIEAALDDWRTD HLVDLILIDGAGDRAFCSGGDIADMYASAQRRDFGYGQRFWRDEYRLNRKIHHYPKPI VTFLHGFTMGGGVGIGCHASHRIVCDDSRIAMPECSIGLVPDVGGSLILARAEGYLGT YLGLTGDRMDAGDAIHAGFADHYIAAPSWEALKSVLITTGNVAAIQPSPPPPSRLKDW QKAIDAAFGTPDLTDIRTKLAAQGGTLADHALPLLDYNAPLAMAVAARIIGAVRRDPR IETALDHEFRYTFRCAAQGDFIEGIRAAIIDRDRSPRWQNYTDDDITAMTAPLGKDAL IWEDAT" gene complement(555385..556521) /locus_tag="SKA53_02846" CDS complement(555385..556521) /locus_tag="SKA53_02846" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /db_xref="CDD:27637" /translation="MDFALTEEQSAIFDMALAFGQEHIAPFARDWDSDGTIPKALWPK LAELGFGGLYVSEDSGGAGLSRLDATLVFEALSYSCASVAAFLSIHNMCARMIDSYGS DDLKARILPRALSMDLILSYCLTEPGSGSDAAALKTRATCNNETYLLTGTKAFISGGG YSDAYIVMARTGDAGPKGISAILIEGDAPGLSFGGLEDKMGWRSQPTRQVQLDDCATP LGNLLGVEGQGFSYAMAGLDGGRLNIAACSIGAAQCALDQTLAYMKDRKAFGQSLDQF QGLQFRLADAEIALQSARTFLRQAAWKLDTGAPDATKFCAMAKKLCTETGSMVADQCL QLHGGYGYLADYGIEKIVRDLRVHQILEGTNEIMRLITARQMIR" gene complement(556614..558113) /locus_tag="SKA53_02851" CDS complement(556614..558113) /locus_tag="SKA53_02851" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="methylmalonate-semialdehyde dehydrogenase" /db_xref="CDD:25427" /translation="MQELTHYIGGAHVKGTSGRFADVYNPATGEVQARVPLANAAEMD KAVQIAAEAQPKWAKVNPQRRARVMMAFVGLLNRDMDKLAEALSREHGKTIPDAKGDV VRGLEVVEYCIGAPQLLKGEFTDSAGPGIDMYSMKQALGVTAGITPFNFPAMIPMWMF APAIACGNAFILKPSERDPSVPLMLAELMEEAGLPKGILQVVNGDKEAVDAILDHDVI QSIGFVGSTPIAEYIYGRGCANGKRVQCFGGAKNHMIIMPDADMDQAADALIGAGYGA AGERCMAISVAVPVGEETADRLIEKLVPRIEALKVGPYTSGNDVDYGPVVTAAAKANI LKLIESGVAQGADLVVDGRDFKLQGYEDGFFVGPHLFDRVTKDMDIYTKEIFGPVLSV VRAQNYEEALGLAMDHEYGNGTAIFTRDGDAARDFANRINIGMVGINVPIPVPLAYHT FGGWKKSMFGDLNQHGPDAFKFYTRTKTITSRWPSGIKDGSAFSIPLME" gene 558209..559111 /locus_tag="SKA53_02856" CDS 558209..559111 /locus_tag="SKA53_02856" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /db_xref="CDD:10453" /translation="MDNWDDMRVFLAVARMESLSAAAPLTKMDPATLGRRITRLERSL GAALFVKSPQGYALTDLGERLRDRAADAETQFALAIEETRGGATALTGQIRIGAPDGV ANFLLPQVCAALQRDNPDLEMQVLALPRVVNLSRREADMAITVSPPAAGQLIVQKITD YQLHLAMRADAPPAETLDDLRGRPVVGYIPDMIFDKELDYLGALGAGGVQLASNSVAV QLQMIRAAGVGIVHDFALPFAPELRRILTDKVSLTRTLHLVRHKSARQSDRLTRVASA LSAGLLAEVARLERIACLTDAPAV" gene 559150..559584 /locus_tag="SKA53_02861" CDS 559150..559584 /locus_tag="SKA53_02861" /note="COG0517 FOG: CBS domain" /codon_start=1 /transl_table=11 /product="Protein containing a CBS domain" /db_xref="CDD:12254" /translation="MIVGQILKTKADMGVVSVKPTDMVTDAVTLLSQNRIGTVVVSGD GVTLDGILSERDIVRELGKRGVSCLSAPVSEIMTAKLTTCTTADSADLVLQMMTEGRF RHLPVMDNGTMIGLISIGDVVKARLSELSMEKDALEGMIMGH" gene 559681..560175 /locus_tag="SKA53_02866" CDS 559681..560175 /locus_tag="SKA53_02866" /note="COG0669 Phosphopantetheine adenylyltransferase" /codon_start=1 /transl_table=11 /product="pantetheine-phosphate adenylyltransferase" /db_xref="CDD:10538" /translation="MRVGLYPGTFDPVTLGHLDIVRRAASLVDRLVIGVAINRDKGPM FTLEERVAMVEAECVPLGRDVGCEIIVHPFENLLITCAHDVGANVIIRGLRAVADFEY EYQMVGMNRILDDSIETVFLMAEAEHQAIASKLVKEIARLGGDVSKFVTPAVNDALIA RLRG" gene complement(560233..561234) /locus_tag="SKA53_02871" CDS complement(560233..561234) /locus_tag="SKA53_02871" /EC_number="1.2.1.12" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase" /db_xref="CDD:9932" /translation="MAVKVAINGFGRIGRNILRAIIESGRTDITVVAINDLGPVETNA HLLRFDSVHGRFPGTVTTTETSIDAGRGPIAVTAIRNPADLPWGDVDVVLECTGIFTS KQSCQAHLSTGAKRVLISAPGTDADKTIVFGVNHQSLTKDDIIVSNASCTTNCLSPVA KVLNDAVGITKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLV LPELNGKLDGVAIRVPTPNVSVVDLTFEASRATTAEEINNAIIAAADGPLKGILGYTA LPMVSSDFNHDPHSSIFHLDQTKVLDGNMVRILSWYDNEWGFSNRMADTAVAMGKLL" gene complement(561314..561457) /locus_tag="SKA53_02876" CDS complement(561314..561457) /locus_tag="SKA53_02876" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTNGIAVFLLVLIGAALAYDGLANDWQAFTFSLRKFVDLTEYLA FWR" gene complement(561483..562484) /locus_tag="SKA53_02881" CDS complement(561483..562484) /locus_tag="SKA53_02881" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase, type I" /db_xref="CDD:9932" /translation="MTITIGINGFGRIGRCTLAHITEAGRNDVQVVKINATGPIATNA HLLKYDSVHGRFGHPVSVKGNTLDLGRGPIDVMSSYDPATLDWDGVDVVLECTGKFND GHKAAVHLDRGARKVLISAPATNVDRTVVYGVNHRDLLATERLVSNGSCTTNCLAPLA KVLNDAIGIERGIMTTIHSYTGDQPTLDRRHDDLYRARAAAMAMIPTSTGAAKALGEV LPELAGKLDGTAMRVPTPNVSAVDLTFEAGKSVTVAEVNAIVAEAAGGYMGMVLAYDD EAKVSIDFNHTTQSCIFAPDQTKVVGGRTVRVLAWYDNEWGFSARMADVAATMGRLQ" gene complement(562663..564681) /locus_tag="SKA53_02886" CDS complement(562663..564681) /locus_tag="SKA53_02886" /EC_number="2.2.1.1" /note="COG0021 Transketolase" /codon_start=1 /transl_table=11 /product="transketolase" /db_xref="CDD:9897" /translation="MDIAALRSAHPDHWKKATAIRTLTLDAVAAANSGHSGMPMGMAD VATVLFQNHLKFDPKSPAWPDRDRFILSAGHGSMLLYALMYLTGYEDITLQQIKDFRQ WGAKTAGHPEYGHARGIETTTGPLGQGIANSVGFAIAEEIQRAHWGAKIVDHHTYVIA GDGCLMEGVSQEAIGLAGMQKLGHLVVFWDNNNITIDGTVDIADITDQPARFAASGWH VQEIDGHDPVAIDAAIVAAKADPRPSMIACKTHIALGHAAQDTSKGHGALTNADQLAA AKTAYGAPMGAFEVADDVLDAWKAIGARGAATRAAWDARFAALSAARQAEFTRAYAGD APKKLSATIRALKKQISESAPSVATRKSSEMTLEVINPIMPETIGGSADLTGSNNTKT GDLGVFHPDTRKGRYIYYGIREHGMAAAMNGMALHGGARAYGGTFMCFTDYARGAMRL SALMGVPVTYVMTHDSIGLGEDGPTHQPIEHLAMLRATPNMHVFRPADTIETAEAWEI ALTSKTTPSVLALSRQNLPTVRKTHTNKNLTAQGGYVLTDADGKRQAIIMATGSEVEI ALAARDLLQAQGIGTRVVSMPCWELFEEQDASYRRRVLPAGPVRVAVEAGIRFGWDRW LFGEGGKREKSGFVGMHGFGASAPAERLYAEFGITAQGVADKVKSLIK" gene complement(564694..564936) /locus_tag="SKA53_02891" CDS complement(564694..564936) /locus_tag="SKA53_02891" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDLSHSATPDCPDQGQTFTPVSTPVSGAYPESFRHFQILCDQP QRGKRADGIDQNRLAVALDLGGDPVMTLFIEFNPFG" gene 564936..565481 /locus_tag="SKA53_02896" CDS 564936..565481 /locus_tag="SKA53_02896" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSDVLELGHRITVALDRIRRGMEAQDKADAAESSLFDALRAEQA QTGALRDQIQQLQAALETQDAQAAQAALDAQIADQAALHAKDAQVAALTVRLETQAAQ LQTMDAHLQGLRAATQQLRDLNGQLRQALTVGLAPGMIDTALAAEIDALQALRATDAA EIDMILAELKPLIEDAAHAAG" gene 565468..565860 /locus_tag="SKA53_02901" CDS 565468..565860 /locus_tag="SKA53_02901" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPQVEIFIGGRTFEVACQEGEEHFLHSAAAMLDAEAATLAEQIG RLPEARMLLMAGLLLADKTAGLEDKLREAQVEAVALRAKLDDAQAQPAPAPQRIEVPV VPVDVVDTLAELAARAEALADQVDAKLA" gene complement(565861..566250) /locus_tag="SKA53_02906" CDS complement(565861..566250) /locus_tag="SKA53_02906" /note="COG0278 Glutaredoxin-related protein" /codon_start=1 /transl_table=11 /product="glutaredoxin-related protein" /db_xref="CDD:10152" /translation="MKHDLTKDRHMTAKDQIQETITSNDVVLFMKGTKSMPQCGFSSR VAGVLNFMNVDFADVNVLADEEIRQGVKDFSDWPTIPQLYVKGEFVGGCDIITEMTLS GELDTLFAEKGVSFDKDAAEKIREANA" gene complement(566247..566483) /locus_tag="SKA53_02911" CDS complement(566247..566483) /locus_tag="SKA53_02911" /note="COG0271 Stress-induced morphogen (activity unknown)" /codon_start=1 /transl_table=11 /product="BolA-like protein" /db_xref="CDD:14137" /translation="MPITAHEIETLLRESFPQARISVQGDDGAHFAAEVIDESFRGLN RVQQQRAVYAALKGRMDGSQGELHALALTTKAPD" gene complement(566584..568743) /locus_tag="SKA53_02916" CDS complement(566584..568743) /locus_tag="SKA53_02916" /EC_number="6.3.5.3" /note="COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase subunit II" /db_xref="CDD:9921" /translation="MTEPAITPDLIAAHGLKPDEYQRILDIIGRTPSFTELGIFSAMW NEHCSYKSSKKWLRTLPTTGPQVICGPGENAGVVDIGDGQAVVFKMESHNHPSYIEPY QGAATGVGGILRDVFTMGARPIAAMNALSFGEPSHPKTRQLVNGVVAGVGGYGNAFGV PTVGGEVRFHAAYNGNCLVNAFAAGLADADKIFYSAASGVGMPVVYLGAKTGRDGVGG ATMASAEFDDSIEEKRPTVQVGDPFTEKRLMEATLELMATGAVISIQDMGAAGLTCSA VEMGDKGGLGIRLNLDAVPQRETGMTAYEMMLSESQERMLMVLRPELESQARAVFVKW DLDFAIVGETIPEDRFIVVHKGVVMADLPLATLSGSAPEYDRPWVPTPAQPPLGDVVG VNPIDGLRALISSPNYAAKQWVYEQYDAQVMGDTARIPGLGAGIVRVHGTDKSLAFTS DVTPRYVMADPVEGGKQAVAEAYRNLTAVGAKPLATTDNMNFGNPEKPEIMGQFVGAI QGIGAAVTALDMPIVSGNVSLYNETDGKGILPTPTIGAVGIITHPDQIISGQLRDGHV LLVVGDTTGHLGQSALLAEVYHRAEGPPPPVDLDAERRHGDFIRANHTLITACTDLGD GGLALAVFELAESAGVGITLDAGDTPTLFGEDQARYLIGCNFDQAEALMVAAGQAGVP VTTVGKAGGDQITFGSDSAPLADLALIYRTSFEKALA" gene complement(569070..569975) /locus_tag="SKA53_02921" CDS complement(569070..569975) /locus_tag="SKA53_02921" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /db_xref="CDD:10453" /translation="MDWDKLRIFHAVADAGSLTHAGDTLHLSQSAVSRQIRALEETLN TTLFHRHARGLILTEQGELLFDATKSMNKRLETASARIRDSEEEVFGDLRVTTTTGFG TLWLAPRLPKLFEAYPDLKIDLMLEERVLDLPMREADVAIRMKEPSQADLIRKRLMSV RMRLYASPTYLETNGTPESLLDLSDHRLVCQSLNSIQVAAGATLVQHLLTSDIQHLFT VNNYFGVLQGVLNNIGIGVLPDYVTEDFPDLVRVLPDLESGEVPVFLAYPEELRQSKR IAAFRDFVQEEIFAHRRKIREAAPQ" gene 570129..573542 /locus_tag="SKA53_02926" CDS 570129..573542 /locus_tag="SKA53_02926" /EC_number="1.2.7.8" /note="COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits" /codon_start=1 /transl_table=11 /product="indolepyruvate ferredoxin oxidoreductase" /db_xref="CDD:13481" /translation="MGRHEITLDDRYDLHKSPVLLNGTQALVRLMLMQKARDTRAGLH TAGYVTGYRGSPLGAVDMQMARAKNVLEPADITFQPGLNEDLAATALWGSQQAELRGE GKFDGVFGLWYGKGPGVDRSGDVMRHANMAGTSPHGGVIMAMGDDHTGESSTTLHQSD WAMVDAYMPIVSPAGVQEILDYGLYAWALSRYAGVWVGLKTMKDTVEVTSVVDADPFR ADFVTPDMALPDGGLNIRLVDTPQLQEARMIDHKRFAAEAFSRANKMDQRKWGKAGAK IGFVAAGKNWLDLQHALALLNISEGDAERLGITTYKVGQVWPLDMASFHDWAAGLDLV IVVEEKRKLIEVQVKEALFDDSRTRVYGWHKGDEHSEGRREEIFPTRAALDPIWIAEK IGGILIEEGCGSDGISAGMTALAEARRADNAPELAARLPYFCSGCPHNSSTKVPEGSR AYAGIGCHYMVQWMDRDTVGFTQMGGEGANWVGEAPFSTRDHVFQNLGDGTYNHSGVQ AIRFALMAGTNITYKILYNDAVAMTGGQGNDGGLTPDQICRELQAMGVRNIALVHDAK EDLDLSVFPAGLDINERADFEAVQKKFSKYKGVSAIVYVQTCAAEKRRRRKRGQFPDP DKRVFINTDICEGCGDCGVQSNCVSIVPVETELGRKRAIDQSSCNKDFSCVKGFCPSF VTIEGAQIRKDATAAVDLPDMPDPVLPAIHGTHNTVITGVGGTGVVTIGAVMAMAAHI DGKGAGMMEMAGLAQKGGAVHIHCRIAEKPGDISAIRVATGECDTLIGGDLVVSAGAK TLGLMRAGRTRGVVNSHEIITGDFTRDTAFTLPTDALRLSLQARLGENVMLFDASDLA RALLGDSIYSNMMIFGAVWQMGAIPLTRQAIIDAIDLNGAAVKRNIAAFDYGRWAYLH PADAAAILAPDVVVLPQTLDDKIAFRMTHLTQYQSARLARRYRTFVDQFRDEPLREAV ALGYHKLLSYKDEYEVARLLTQTRAKAAATFDGDLKLTYHLAPPIMSKTGSDARPVKR EFGARMAWAFPKLAQFKFLRGTLLDPFGRNPERRMERALIAQYEADMAQVLRILRPDT HDAAVALARLPLDIRGFGPVKDAAARKAAKRREELLTSLHAAPMQQAAE" gene 573622..574530 /locus_tag="SKA53_02931" CDS 573622..574530 /locus_tag="SKA53_02931" /note="COG3176 Putative hemolysin" /codon_start=1 /transl_table=11 /product="acyltransferase domain protein" /db_xref="CDD:12514" /translation="MMRKDRQVARDITYATSAKGRGGRALIRVMENATGRLRLIKKAR GYDRDVAQGADFWQVITARYGLDLQIAGGSLDDIPSSGPLIVVSNHPYGILDGLMMGL ILSQRRGGDFKVLAHRIFRASPDLEKVILPISFDETKEAAKLNLETRAEAVRYLAAGG AIGIFPGGTVSTSAKPFSPPMDPSWRNFTAKMIAKSDAVVVPIFFEGRNSRLFQLASH LHVTLRMGLLIREFKARINKPVRVVIGKPIAADALAGLKKDPKACMDFLRKATYELSL DPLDPTMIGHEFEDKYKVRDGRRDIR" gene 574508..575320 /locus_tag="SKA53_02936" CDS 574508..575320 /locus_tag="SKA53_02936" /note="COG0796 Glutamate racemase" /codon_start=1 /transl_table=11 /product="Glutamate racemase" /db_xref="CDD:10664" /translation="MAVGIFDSGLGGLTVLDAVAKRLPDVPLVYLGDSAHAPYGVRTP DDIYNLTTAATQRLFDAGCDLVILACNTASAAALRRMQESWVPQGKRVLGVFVPLIEA LTERQWGDNSPPREVAIKHVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDA IEDGDMILAEALVRSHVDALRRKMPNPDAAVLGCTHYPLMEKVFQDALGPQAKVFSQA NLVAESLADYLSRRPEMVGTGRDSAFLTTGDPARVSARATQFLRRQITFTAA" gene 575333..576361 /locus_tag="SKA53_02941" CDS 575333..576361 /locus_tag="SKA53_02941" /note="COG0002 Acetylglutamate semialdehyde dehydrogenase" /codon_start=1 /transl_table=11 /product="N-acetyl-gamma-glutamyl-phosphate reductase" /db_xref="CDD:9878" /translation="MTYNIAILGASGYTGAELVRLIATHPHLRIAALSADRKAGQQMA DVFAHLRHLDLPALVKMEDIDFSGIDLVFAALPHRLSQALVRDLPQAVKVVDLGADFR LRDPADYEKWYGAPHVAPELQKTAVYGLTEFYRDEIKSARLVAGTGCNAATVQFALRP LIAGGLIDLDDIICDLKNGISGAGRSLKENMLFTERSTDVLGYSQGGKHRHLGEFDQE FSALAGRKVEIQFTPHLVPISRGILASCYLRGDAQAIHAALSVAYADEPFIHVLPFGQ CPGTGHVMGSNFCHIGVTSDRISGRALVVATLDNLCKGSSGQAVQNANLMLGLNETDG LMLVPVFP" gene 576358..576825 /locus_tag="SKA53_02946" CDS 576358..576825 /locus_tag="SKA53_02946" /note="COG2332 Cytochrome c-type biogenesis protein CcmE" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmE" /db_xref="CDD:12008" /translation="MSGLKNLKKRRRVQVISIAGACVAFVLVLLWFLPSDSFQFFRSP SEVAEATPMPNERFRLGGLVETGTLVRGQGQEISFAVTDGGASIPVVYAGILPDLFSE GEGVVAQGNMINGRFEAVEILAKHDETYMPTEVLDALKAQGVYVDPNGARITN" gene 576870..577481 /locus_tag="SKA53_02951" CDS 576870..577481 /locus_tag="SKA53_02951" /note="COG3926 Putative secretion activating protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24062" /translation="MQSITDIAAEIVAREGGYVNDPDDPGGPTKYGVTIHTMRRLGLD LTGDGTIDASDVQRLDHTQAVTIFVEHYYHRPRIDRLPQVIQASVFDMYVNAGVNAVR ILQRLLVDMRLPVAVDGVIGPQTITAASRAAEAAPDHLADAYGIARRNYYYDLADRRP ASRKYARRRDGGKGGWITRAEEFISSHYHLTAAQHQQRTATWA" gene 577493..577963 /locus_tag="SKA53_02956" CDS 577493..577963 /locus_tag="SKA53_02956" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGLLFGNSRNVLVDTAQVFRPNAERSAIRDADAKSESLQQFAAE FVHARQGLFDRAVDALNRLPRPMLALGTIWLFVMAMLDPDGFAAGMAGLALVPEPLWW LMGAIVSFYFGARHQAKEQDFQRVLAAAVVARQPGPAPDDTNPALRDWQASHGN" gene 577953..578156 /locus_tag="SKA53_02961" CDS 577953..578156 /locus_tag="SKA53_02961" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="METSVLDRFESRLRQLETRNAVDAVHRDNVATRLGAIEDTLKWL VRLIIGGMLMAAVSYVVQGGFTL" gene 578231..580207 /locus_tag="SKA53_02966" CDS 578231..580207 /locus_tag="SKA53_02966" /note="COG1138 Cytochrome c biogenesis factor" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CcmF" /db_xref="CDD:10858" /translation="MLNELAHFALILAFGVAIVQMIIPLIGAERGNVGWMSLAEPAAT IQFLLTGFAFAALTWAFVVSDFSLQLVYLNSHTDKPLIYKITGVWGNHEGSMLLWVLI LALFGACAGWFGGNLPMRLRARVLAVQGAISVAFLAFVIFTSNPFTRLEFPPLNGRDL NPLLQDPGLAFHPPFLYLGYVGLSMAFSFAVAALIEGRVDAAWGRWVRPWTLAAWMFL TVGIALGSWWAYYELGWGGFWFWDPVENASLMPWLISAALLHSAIVVEKREALKSWTI LLAILAFGFSLLGAFIVRSGVLISVHAFAVDPERGVLLLIILGIFLGGSLTLFAFRAS AMQSKGVFSTVSRESALVLNNILLAVSCFVVFIGTMWPLVAEMLFDRTLSVGPPFFDA AFTPFMVGLAIALPLGSMLAWKRGTLDRMSKAMVGWLALAVALAALAYAVQSGGSALG PVGVALGVWVVGGALADLWLRAGRDDLRTRLRRIRNLPRADWGKATAHIGMGVTVFGV AAMLAWQKEDIRIADIGDRWDMGAFQVQLDAVNQIEGPNYVTTMADMSIWRGDRELYT LQPEKRFYPVANMPTTEAAISNGIIRDVYVVVGDPQVNGGWAVRTYDKPFANWIWGGC MLMALGGLLSLSDRRLRVGAAAPKPERPGAVPAE" gene 580204..580644 /locus_tag="SKA53_02971" CDS 580204..580644 /locus_tag="SKA53_02971" /note="COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes" /codon_start=1 /transl_table=11 /product="cytochrome c biogenesis family protein" /db_xref="CDD:12427" /translation="MIRLIAIFLLVASAAFAVQPDEVLDDPVLEKRARDLSQGLRCPV CRNESIDESNAELSRELRILLRERLVDGDSDEQAVDFLVARYGEFVLLRPDTSGVNVV LWYAAPVMLLIALGIGWSVIRRPAVAPPELSDAEKAELQKILRS" gene 580695..581492 /locus_tag="SKA53_02976" CDS 580695..581492 /locus_tag="SKA53_02976" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /db_xref="CDD:10752" /translation="MSNKDRIMDYQAVTLTIRDAVATLMLNRPTVMNALNTQMRAEIA HAVKAAEKDARVLVMTGAGKAFCSGQDLGDGGSAASIDLERTLRDEYVPMLKAIFDCR IPTIAAVNGAAAGAGANLALACDVVIAADSAYFVQAFTRIGLIPDAGGTYWLPRQVGA AKAMGAALFADKISAQQASDWGMIYEVVSDAGFADHIAARAAHLAQGPTVAYRQLKKA IRGSFENTLDDQLALEARLQGRCGQTRDFQEGVVAFLEKRKPVYEGR" gene complement(581544..582839) /locus_tag="SKA53_02981" CDS complement(581544..582839) /locus_tag="SKA53_02981" /note="COG0372 Citrate synthase" /codon_start=1 /transl_table=11 /product="citrate synthase I" /db_xref="CDD:22965" /translation="MAETTDTAKLTIKGKTYDLPVYSPTTGPDVLDIRKLYAQADVFT YDPGFTSTAACDSTITFIDGDKGELLHRGYPIDQLASQSHYLEVCYLLLYGELPSAAE LEKFESLVTNHTMIHEQMHNFFRGFRRDAHPMATMVGVVGAMSAFYHDSTDINDEHQR EVASIRLIAKMPTIAAMAYKYSIGQPFVYPRNDLDYAANFLHMCFAVPAETYHVNPIL ARAMDRIFTLHADHEQNASTSTVRLASSSGANPFACIAAGIACLWGPAHGGANQACLE MLKEIGTPDRIPEFIARAKDKNDPYRLMGFGHRVYKNFDPRATVMKQSADEVLDLLGV ENNPVLQVAKELERQALADPYFAEKKLFPNVDFYSGIILEAMGFPTSMFTPVFALART VGWISQWKEQLADPQLKIGRPRQLYLGSTARDYVDIENR" gene complement(582929..584329) /locus_tag="SKA53_02986" CDS complement(582929..584329) /locus_tag="SKA53_02986" /note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /db_xref="CDD:9884" /translation="MSRPVVTRFAPSPTGALHIGGARTALFNWLYARGRGGKFLLRIE DTDRARSTPENAQAILDGLTWLGLDWDGDPVSQFDSAARHAQVAHDLLAAGKAYKCFS TQDEIEAFREQAREQKTSTLFRSPWRDVPAADHPDLPFVIRIKAAREGTTTLHDEVQG DVTWSNDQLDDMILLRSDGSPVYMLAVVVDDHDMGVTHVIRGDDHLANAFRQNLIYDA MGWPKPVLAHIPLIYGPDGKKLSKRHGATGAAEYQALGYPAAGMRNYLARLGWSHGDA EFFSDAQARDWFDLHGIGKSPARFDTAKLEHLCGQHIAVADDAALLHELQGYLAATGA APLGDAQKDGLLRGMYCLKERAKTFPELVEKAHFILTSRPIVPDEKSAAQLTDVSRGI LSELTPQLQNASWTRDTLESIVATIAQAHDTKLGKLAGPLRTALAGRSVSPSVFDMML VLGQSETIGRLSDASK" gene 584422..586488 /locus_tag="SKA53_02991" CDS 584422..586488 /locus_tag="SKA53_02991" /note="COG0658 Predicted membrane metal-binding protein" /codon_start=1 /transl_table=11 /product="competence protein" /db_xref="CDD:26138" /translation="MVEDALLAQRGGLLCWVPVWLGLGIGWYFAQRQEPGDAGLAIGG AVAFALLLALPRIGVAYRPVVLAIIIAMIGAGIAKYRSEAVGAPVLNFRYYGTIEGRV VNIDRSASDALRLTLDRVVLDRIAPHRTPARVRVSVHGDQPFSDYRPGTVLMMTGHLS PPAGPAEPGGFDFQRHAWFLGLGAVGYTRNPVLRLAAPAAPDAMMRIFALRMAISRAV QEAMPGEAGAFAAALMTGDRSGMGQDGLAALRAANLAHLLAISGLHMGLLTGFVFAVV RYGLALVPAVALRLPTKKIAAVIALIVGAFYLALSGGNVATERAFVMVAVMLVAVLLG RRALTLRGVAIAAIIVLVWQPEALTGPGFQMSFAATIALVAVFRALRGAKLHRLPRWT RPVMSVFVSSLVAGLATAPYAAAHFNIMSHYGLIANLISVPLMGVLVMPAAVLAACLW PLGLAWIGLAVMEPGLRWILFVAQTTAAQPNAVSHVIAPPGAVLPILTLALLWLILWQ GRARFAGLAFAALAFVIWQQGTRPALLVADDGGLIGVLGPEGRSLSKPTGGSFSAGIW LENDGAPVAQDIAAARGGVQRDGRVVTAMLGEWRIVQVSGKTALAALQGCGGADVLIV NQVDEVARPCHVYDLTGLRRTGALAMDLTATGDLRIETSRARAGNRPWNGRTGPPEAA LLLSRQ" gene complement(586482..587165) /locus_tag="SKA53_02996" CDS complement(586482..587165) /locus_tag="SKA53_02996" /EC_number="3.4.21.88" /note="COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)" /codon_start=1 /transl_table=11 /product="LexA repressor" /db_xref="CDD:11682" /translation="MLTKKQLDLLAFIHTRVQRDGVPPSFDEMKEALDLRSKSGIHRL ITALEERGFIRRLAHRARALEILKLPDSMMGSGFQPRVIAGDKPASIPTAALPVEGGS MSLPVMGRIAAGVPIEAISEVSHHVHVPQSMLGKGEHYALEVKGDSMIEAGINDGDVV VIRETSVANNGDIVVALVEGQEATLKRFRRTGSAIALEAANPAYETRVFRDDQVKVQG RLVGLIRTY" gene complement(587277..588449) /locus_tag="SKA53_03001" CDS complement(587277..588449) /locus_tag="SKA53_03001" /note="COG0303 Molybdopterin biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein A" /db_xref="CDD:10177" /translation="MISVAEALQDLFALVTPLPAQDVPLRDAAQRVLARDVTARRDQP PFAASAMDGYAIHAADHRQGASLTVIGEAAAGHGWHGTLAQGQALRIFTGAPVPAGAS RVIIQENVTRDGEKITITDAQDSGSNIRPLGGDFAQGTSLPAPRHLSPNDIALLAAMN IASVPVTRKPVVAIIATGDELVQPGDSPGPDQIIASNSYGLAALVAAAGATARLLPIA RDSIASLEQTFALAQGADLIITIGGASVGDHDLVGQVAQSLGMQRSFYKIAMRPGKPL MAGRLGSAAMIGLPGNPVSAMVCGHVFVLPVIRKMLGLGAHPAATQTALLAHDISANG PRAHYMRAHATAAGVTIFERQDSSLLSVLTQANCLALRPPHDPARQAGESVQIVPL" gene complement(588446..588922) /locus_tag="SKA53_03006" CDS complement(588446..588922) /locus_tag="SKA53_03006" /note="COG0315 Molybdenum cofactor biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein C" /db_xref="CDD:27778" /translation="MTGLTHFDAEGQAHMVDVSDKAVTDRIAVAEAHIVMADATLALI TQGRAKKGDVLGIARIAGIMAAKKTADLIPLCHPLPITKVSIDLTPDATLPGIRISAT VKTSGQTGVEMEALTAASTAALTVYDMVKAVQKDMVIGGLRVTLKDGGKSGRFENP" gene complement(588919..589728) /locus_tag="SKA53_03011" CDS complement(588919..589728) /locus_tag="SKA53_03011" /note="COG0134 Indole-3-glycerol phosphate synthase" /codon_start=1 /transl_table=11 /product="indole-3-glycerol phosphate synthase" /db_xref="CDD:25449" /translation="MTDILAKIKDYKLADVAARKIALPLAEAEALARAASPVRGFAAA LAGASREGYGLIAEIKKASPSKGLIRADFDPAALAQAYAQGGATCLSVLTDAPSFQGD DSYLVAARDACALPALRKDFLYDPWQVAESRALGADCILIIMASVSDAQAQELEQAAI DWQMDVLIEVHDQAELDRAVLLKSPLIGINNRNLKTFDVTLDTTRILSKRVPEDRQIV CESGLFTPEDLADMARYGARAFLIGESLMRQDDVAAATARLLANPSTGAMR" gene complement(589725..590366) /locus_tag="SKA53_03016" CDS complement(589725..590366) /locus_tag="SKA53_03016" /EC_number="3.2.2.-" /note="COG0692 Uracil DNA glycosylase" /codon_start=1 /transl_table=11 /product="uracil-DNA glycosylase" /db_xref="CDD:10561" /translation="MFDLSRLGDWADLPFFRDDLPILAGRIGADILPPPALTFTALAR CQPAATRVVILGQDPYHTPDKADGLAFSINPAFTGNLASLGNIFKEIQSDTGQSRNKT NLHDWADQGVLLLNTALSVAPGRAGAHGKIGWSRLVHQVLARLNDHPRAFILWGAQAQ AYAARLPAHHLLLTSAHPSPLSAHRGFFGSRPFSKVNQWLMDRGDIPINWAAP" gene complement(590366..591379) /locus_tag="SKA53_03021" CDS complement(590366..591379) /locus_tag="SKA53_03021" /note="COG0547 Anthranilate phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="anthranilate phosphoribosyltransferase" /db_xref="CDD:10418" /translation="MTEAMKPLIYAASEGPLSRAQAEEAFGYLFAGQATPAQIGGLLM ALRARGEAVSEYAAAAAVMRAHCVPVTAPDGAMDIVGTGGDGKHTLNISTATAFVVAG AGVPVAKHGNRNLSSKSGTADVQSALGINVNVTPDVVERAIAQAGIGFMMAPLHHPAM RHVGPVRLELGCKTIFNILGPLTNPAGVKRQLTGAFAIDLIFPMAETLQQLGTEKAWL VHGSDGTDEITICGPTSVAVLDGGKITSRQIHPEDAGLPEHAFRDIIGGSPQDNAQAL RALLDGAPGAYRDAVLFNAAAALVVADKAANLPDGVQIARDSIDSGKAKAALDALVRV TNA" gene complement(591376..591957) /locus_tag="SKA53_03026" CDS complement(591376..591957) /locus_tag="SKA53_03026" /note="COG0512 Anthranilate/para-aminobenzoate synthases component II" /codon_start=1 /transl_table=11 /product="anthranilate synthase component II" /db_xref="CDD:10383" /translation="MLLLIDNYDSFTYNLVHYLGELGAEVVVRRNDALDVQQAMAMRP SAIVLSPGPCDPAQAGICLPLVHAAAETGMPLLGVCLGHQAIGEAFGGHVVRCHDIVH GKMGQMRHQGQGLFAGLPSPFAATRYHSLVVDRATLPDCLKITADLEDGTIMGLQHKT LPIHGVQFHPESIRSEHGHALLQNFLDIAKVLA" gene 592100..593428 /locus_tag="SKA53_03031" CDS 592100..593428 /locus_tag="SKA53_03031" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:16045" /translation="MRAFLAGGGWAVLVGGGLLGLVSVSVGPETPVVSQPPAATAQPA AVPAAPATAPVLDTPVMTTPQVVLPDTAPAVPEIVPEPAPEPLPAIVPETVPELAPQT AADAPPLAAAIEAAVPPPAAMTPPAPTVMPDAPITPPQAPAQPAPEQDLPVVTLPAPV PPALQDTPAEPLPAPQVRPQTSPSASLPQSTADVRVNRPRTAPAAGPEEPALDGDLAS PLLRYAADFDYAADLPMIAVVLMDNALILDAPDVLSGLPFVPTIVLNAAAADVTARMR AYRAAGIEVLLQADLPQGALPSDVETTYVGAFGLVPEAIAIFSDGTGPEAQDRMLADQ ALRLIGDEGRGFVTLPRGMGGALRNITADGVPVAQITRDIDGAGETRDAIERSLQQAA LRARQSGHVVLLGRTTPETLAAIRNWAERSDPSQISLAPVSAILLEQLAQ" gene complement(593431..594939) /locus_tag="SKA53_03036" CDS complement(593431..594939) /locus_tag="SKA53_03036" /EC_number="4.1.3.27" /note="COG0147 Anthranilate/para-aminobenzoate synthases component I" /codon_start=1 /transl_table=11 /product="anthranilate synthase component I" /db_xref="CDD:10022" /translation="MALLPDYDSFARSYDAGENQVVYTRIAADLDTPVSLMLKLSEAG TNAFMLESVTGGEIRGRYSIIGMNPDLIWDCRGTTARVNRSARFDADAFEVMPAAPLD ALRAILAESRINLPASLPAAAAGLFGYLGYDMIRLVEHLPDVNPDPLGLPDAIMLRPS VVAVLDGVKGDVILVAPAYVRPDLSAKAAYAQAAERVMDAQRALDRSLPQHSRALADP APVAPPVSNFTHEGYLQAVEKAKDYIRAGDIFQVVPSQRWTQEFREPPFALYRSLRRT NPSPFMFFFNFGGFQVIGASPEILVRVFGNEVTIRPIAGTRPRGATPAEDDANEADLL ADQKELAEHLMLLDLGRNDTGKVSKIGSVRPTEQFIVERYSHVMHIVSNVVGELADDQ DALSAFFAGMPAGTVSGAPKVRAMQIIDELEPEKRGVYGGGCGYFSAGGDMDMCIALR TAVLQDEKLYIQAGGGVVYDSDPEAEYQETVHKSNAIRKAAADARMFKGGGN" gene complement(594947..596788) /locus_tag="SKA53_03041" CDS complement(594947..596788) /locus_tag="SKA53_03041" /note="COG0760 Parvulin-like peptidyl-prolyl isomerase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAQKKKTKIGAWIIVGVVLVGLAGFGTGGLTGNIRTLGTVGDKD ITVAAYQRNLDQQIRALSAQFGTQISFQQAQAFGIDRQALSQVVQTRTLDNEAARMGI SAGDLAVFDRISAIGAFQSAGGFNRDTYRLVLQQSGQSESEFEAEIREDLARTLLQAA IVSGVPGAAASADALVRYVAEARDVTVLRVSADMLTAPVPGATDADITAFYEANGDEF LLPEAREITYAWMTPAMIQDQMEVTDLAIETLYQDRIADFVQPERRLVERLNYADPAA AQLAGGRLASGDATFDALVTERGLTLADVDMGDLGRDELPANTADAVFTATPGDVVGP FPTSLGAALFRVNAVLNAQEVTLDEASDDLRAELAAEAARSVINDDFDRITDLLAGGA TLEDLAERTDLVLGQISWTPDVTDGIAAYDNFRAAAEALSEGAFPALEVLSDGGVFAL RLDSVTPARVPPLQDIRADVAARWQLQAQQDALLARAAEIAADLTADTDLAALGMTPR VESNLTRRSFVEGMPEGFNDAVFALAPGEARVEDAGNGALIVRLDAITDADPTATDQA AQRASISDSIAAGIAQDLFDAYVQAVQQATRITINQATVDAVNAQLQ" gene complement(596849..598024) /locus_tag="SKA53_03046" CDS complement(596849..598024) /locus_tag="SKA53_03046" /note="COG0436 Aspartate/tyrosine/aromatic aminotransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10310" /translation="MPKSRTAATFTPPVMAARRWLDGVTHPADRPLINVSQAAPVMAP PLALREAVARIMMQDTDAHLYGPVLGLPALRDEIAAQWSAAYGGRINAGQVGITSGCN QAFAAAIAALCGEGDQVIVPVPYYFNHRMWLDMAGVTTVPLVCGADMVPTADAVAALI TDRTRAIVLVSPNNPCGVEYPAATLRAFMDLARAQGIALIVDETYRDFDSRTGAAHDL FSDPAWDDTLIQLYSFSKAYRLTGHRIGAVLTNPVRMAEIEKFLDTVAICPNQIGQRA ALWGMQNLSDWLAGERAEILDRRAAITDHFPQLAAKGWSLLGVGAYFAYLAHPFALSS TDLAQRLVADAGILLLPGTMFMPDDMPAGERQLRIAFANIDRAGIATLFDRLAKVTV" gene complement(598100..598603) /locus_tag="SKA53_03051" CDS complement(598100..598603) /locus_tag="SKA53_03051" /EC_number="2.4.2.22" /note="COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins" /codon_start=1 /transl_table=11 /product="xanthine phosphoribosyltransferase" /db_xref="CDD:11942" /translation="MTDRLPHEKGFHISWDQIHRDSRALAWRLDGQGPDDGAWRAVVA ITRGGMAPAMIVARELDIRTVDTISVKSYDHQNQSEARVLKAPDAALMGDGTGILVVD DLVDSGKTLELVRALFPKAHFATVYAKPKGRPQVQTFITEVSQDTWIFFPWDMALQYV EPYRGKD" gene complement(598608..599414) /locus_tag="SKA53_03056" CDS complement(598608..599414) /locus_tag="SKA53_03056" /EC_number="1.3.1.10" /note="COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)" /codon_start=1 /transl_table=11 /product="enoyl-(acyl carrier protein) reductase" /db_xref="CDD:10493" /translation="MTSQLMQGKRGLIMGLANDKSIAWGIAKACADAGAELAFSYQGE ALKKRVDPLAQSVGSDTVLPCDVGDEASIDALFAALEAKWGKLDFVVHAIGFSDKNEL RGRYVDTSRSNFLMSMDISVYSFTAVVQRAEKMMTDGGSCLTLTYYGAEKVMPHYNVM GVAKAALEASVRYLAEDLGKKNIRVNAISAGTIKTLAASGIGDFRYIMKWNEYNSPLR RTVTQDEVGKSSLYLLSDLASAVTGEVLHVDAGYHVVGMKAVDAPDITKD" gene 599567..600172 /locus_tag="SKA53_03061" CDS 599567..600172 /locus_tag="SKA53_03061" /note="COG0259 Pyridoxamine-phosphate oxidase" /codon_start=1 /transl_table=11 /product="pyridoxamine 5''-phosphate oxidase, putative" /db_xref="CDD:10134" /translation="MSDRAGIFAGEDPFVIAQQWLASAAQTEPSDPNAIALATVDAAG LPNVRMVLLKEIEPEAFVFYTNYEGRKAVEIDASGKAAFVMHWKSLARQVRVRGLVTR EDGPVADAYYATRSLPSRIGAWASRQSQPLETRGALMAEVARKTLQLGPNPARPPYWG GFRITPLEIEFWADGAFRLHDRFRWSRETKDDNWKITRLSP" gene 600288..600815 /locus_tag="SKA53_03066" CDS 600288..600815 /locus_tag="SKA53_03066" /note="COG1278 Cold shock proteins" /codon_start=1 /transl_table=11 /product="cold shock DNA-binding domain protein" /db_xref="CDD:16696" /translation="METLETAYLRRVQGQVKWFDPTKGFGFVIAELGGPDILLHANVL RNFGQGSVVDGSRIDLMVQDTQRGLQAVEVISITPPHADAALPLRDMSDFTPEDIAKR PIEPARVKWFDKAKGFGFANVFGSSDDVFIHIEVLRRSGLSDLQSGEAIGLRLVDGER GRMAIDIVGWEAAAK" gene 600812..601288 /locus_tag="SKA53_03071" CDS 600812..601288 /locus_tag="SKA53_03071" /note="COG1430 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11144" /translation="MKSLILALVLGMAAPLAAAACAEDRVTIRGDWGQATFTVEIADT PATRAQGLMHVETMPRMAGMLFVYERPQAVSFWMKNTLIPLDMIFASPQGEILRVHEN AVPGDLTPIPGGDGVQMVLEINGGLAARLGIAAGDIMQHPAFGADAILACREKTDS" gene 601332..601405 /locus_tag="SKA53_t03235" tRNA 601332..601405 /locus_tag="SKA53_t03235" /product="tRNA-Pro" gene 601923..605531 /locus_tag="SKA53_03076" CDS 601923..605531 /locus_tag="SKA53_03076" /EC_number="1.17.4.1" /note="COG0209 Ribonucleotide reductase, alpha subunit" /codon_start=1 /transl_table=11 /product="ribonucleotide-diphosphate reductase alpha subunit" /db_xref="CDD:28497" /translation="MKIERNFTTEGADAYAALAFKTTTSEIRNPDGTIVFKLDDCEIP ASWSQVASDVIAQKYFRKAGVPSATTKVKEKGVPEFLWKSVPAKNATFGGEISAKQVF DRLAGAWTYWGWKGGYFTTEQDARAYFDEMRHMLASQRAAPNSPQWFNTGLHWAYGID GPAQGHYYVDYQTGELTKSTSSYEHPQPHACFIQSVADDLVNEGGIMDLWVREARLFK YGSGTGTNFSSLRGEGEKLSGGGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVIVD ADHPDIEEFINWKVIEEQKVASIVAGSKMHERYLNAIFAAIESWDGEEIAAYDPKTNE TLAAAVKDAKRSAIPETYIKRVLDYAKQGHTSIEFPTYDTDWDSEAYSSVSGQNSNNS IRVTDAFLKAVENDEMWKLINRKNGEVAKIIKARDLWEQVGHAAWACADPGIQYHDTV NAWHTCPEDGAIRGSNPCSEYMFLDDTACNLASMNLLTFYKDGQFQVEDYMHATRLWT VTLEISVMMAQFPSKEIAQRSYDFRTLGLGYANIGGLLMNMGFGYDSAEGRAMGAALT AIMTGVSYATSAEMAGELGAFPGYAKNEKHMLRVIRNHRNAAYGKTDGYEALDVKPVP LDHANCPDDRLVKLAVESWDEALRLGEAHGYRNAQVSVIAPTGTIGLVMDCDTTGIEP DFALVKFKKLAGGGYFKIINQSVPAALEKLGYGSAQIEEIIAYAVGHGSMGQAPAINH TSLIGHGFGQAELDKVEGALRSAFDIRFVFNQWTLGADFCTKTLGIPEAKLNDPTFDL LRHLGYTKQDIEAANDHVCGTMTLEGAPFLREDHYSVFDCANPCGKKGKRYLSVDSHI YMMAAAQSFISGAISKTINMPNDATIEDCQKAYELSWSLGVKANALYRDGSKLSQPLA SALVEDDDDAREVLESGNHHEKAAVLAEKIVEKIIVREIRNREREKMPQRRKGYTQKA IVGGHKVYLRTGEYEGGKLGEIFIDMHKEGAGFRAMMNNFAIAVSVGLQYGVPLEEFV DAFTFTKFEPAGMVQGNDSIKNATSILDYIFRELAVSYLDRTDLAHVKPEGASFDDIG RGEAEGVANVRTPSENAASRSLEVLKQISSTGYLRKRMPQDLMALQTGVSSAALVSGT ATMTAVVAETATLSARDKAKMQGYEGEACGECGNYTLVRNGTCMKCNTCGGTSGCS" gene complement(605625..606053) /locus_tag="SKA53_03081" CDS complement(605625..606053) /locus_tag="SKA53_03081" /note="COG3542 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25045" /translation="MTADDIIAHLQLAPHPEGGFYRQTWVAQNAGRPVGTCIYFLLKA GAGSHWHRVDAVEIWHYYAGAPLVLSLSPDDAGPAVDHVLGPDLIAGQLPQIIVPDQH WQAARSTGDWTLVGCTVSPGFDFAGFTLADPGFDIPRGRA" gene complement(606064..606702) /locus_tag="SKA53_03086" CDS complement(606064..606702) /locus_tag="SKA53_03086" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTARAAFLRAVGPRLLHCTARSNLAGIHLNGLMPPALLAQKARR DPATLALRRDRVLLTLPDSTSARLNHQLPILQGLAAANSIIDGHDATSWARQLDGRVF FWPAHKGRAFVDSIRRDNEIALIWFDSDALFDALGPALWLSPINSGNFRQGGARARRG DWLYCRATDGITAFRRNRRDRGLVTGTDRVSEISLTSAISARLLYDLAPDIQ" gene complement(606736..608010) /locus_tag="SKA53_03091" CDS complement(606736..608010) /locus_tag="SKA53_03091" /note="COG0148 Enolase" /codon_start=1 /transl_table=11 /product="enolase" /db_xref="CDD:10023" /translation="MTTIIDIHAREILDSRGNPTVEVDVILEDGTMGRAAVPSGASTG AHEAVERRDGDKSRYLGKGVLEAVAAVNGEIAEAILGFDATEQVGIDMSMIELDGTPN KSRLGANAILGVSMAVAKAAADFTSQPLYRYIGGTSARMLPVPMMNIINGGEHADNPI DIQEFMIMPVAASNIREAVRMGSEVFHTLKKELSAAGFSTSIGDEGGFAPAIGSTREA LDFIMKAIEKAGYAPGADIYLALDCAATEYYKGGKYEMAGEGASLSSEQNATYLAKLA ADYPIISIEDGMAEDDWDGWKLLTDMIGDKVQLVGDDLFVTNPARLAEGIKRGCANSM LVKVNQIGTLTETLQAVDMAHRARYTNVMSHRSGETEDVTIADLAVATNCGQIKTGSL SRSDRLAKYNQLIRIEEALGETATYAGRSILR" gene complement(608052..608942) /locus_tag="SKA53_03096" CDS complement(608052..608942) /locus_tag="SKA53_03096" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MENLRGAAFMVLAMFCFALLDTTIKVLSQSMSVGQALALISIGI LALLLGWSLVQRIPLWQTDYRNPRVILRSLCEVVGTCLISLALSLVPLTTVSAVIQAT PLVVAMGAGLFLGQSIGWRRWIAIIVGFGGVLLIIRPGLDGFNPATLLAVAGMLALAS RDLLTRALHVTLSGVQLGIHAFAFVLPASLVLMIAPGEPLVQPDAGTWALVLAGVFIG VMSYLSIIAATRFGNAGVISSFRYSRMIFALAIGFVVLGERPDAATLAGAAIIITSGI FTLWREARMRRASLVAEATI" gene complement(608946..609365) /locus_tag="SKA53_03101" CDS complement(608946..609365) /locus_tag="SKA53_03101" /note="COG0735 Fe2+/Zn2+ uptake regulation proteins" /codon_start=1 /transl_table=11 /product="Ferric-uptake regulator" /db_xref="CDD:23216" /translation="MTDTILSRCEAQGLRLTDQRRVIAGVLESADDHPDVEELYNRAV AVDPRISLATVYRTVKLFEESGILEKHEFGDGRARYEAADRDHHDHLIDMHTGEVIEF VDPEIEALQERIAAKLGYRLMGHRLELYGLPVKKKDH" gene complement(609436..610242) /locus_tag="SKA53_03106" CDS complement(609436..610242) /locus_tag="SKA53_03106" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKSRPYPLQQHPRFAAALSALGVVTRSMALPQGGSLQIVQRWGI RFASRGPVFDLDTSPQQRIAALRQARLHLLNAEMPDPALRQAGFQQTHSAASVAEMPL DGDILARLHPKWRATWRKAGDLTLTTAPFCARAHGWLLQAEHAQQRRARYRALPHALI AAFAATGRDAAVVYTAAQAGAPIAAMLFLRHAPVITYHLGWTSDAGRQCGAHHKILIA AACDHATKGYCRLDLGLVDTHNSPGLARFKIGTGAVIRQLGGTWIKVPWL" gene 610288..610437 /locus_tag="SKA53_03111" CDS 610288..610437 /locus_tag="SKA53_03111" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTNENRKTRAVHGVTAPPVRPTVLGAALVAGAVSLPVGITIQLI SLLVL" gene complement(610552..611802) /locus_tag="SKA53_03116" CDS complement(610552..611802) /locus_tag="SKA53_03116" /note="COG0162 Tyrosyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="tyrosyl-tRNA synthetase" /db_xref="CDD:10037" /translation="MTYHPKSDFMSVMMERGFLADCTDYQGLDDALSRGVVTTYIGYD ATAKSLHVGHLLNIMMLRWLQKTGHQPITLMGGGTTKVGDPSFRADERPLLTADQIDA NIAGMQQVFAKYLTYGDGPTDALMLNNAEWLDQLNYLDFLRDIGRHFSVNRMLAFESV KSRLDREQSLSFLEFNYMILQAYDFLELNRRYGCLLQMGGSDQWGNIINGIDLTRRVL DHEIYGLTSPLLTTSDGRKMGKSAGGAVWLNADMLSPYEFWQFWRNTTDADTGRFLKL YTELPLDECNRLGALQGSDINAAKIILANEVTALLHGAEAATTAEATAREVFEKGGVG DDLPTLTLGAAELGDGMSIAQIIVRAGLAATGKEAKRLIAENGARLNDEPLTDAGLMV DATMLAQPIKLSAGKKRHALVQLG" gene 611864..612973 /locus_tag="SKA53_03121" CDS 611864..612973 /locus_tag="SKA53_03121" /note="COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12049" /translation="MLEGIAVTALGTMSGTSLDGVDAAVVETDGVRIFGFGPVAYRAY SGAEQDVLRAALGLWPDQDVTAAARIVEDAHIAVMAGFRDVAVAGFHGQTLAHDPRGR GTHQCGDGDRLAAALNYPVVWDFRSADVAAGGQGAPLAPFYHFALAKWIGARAPVAFL NLGGVGNLTWVDPACADPADPGALLAFDTGPANAPINDAMRARLGRGYDDNGQVAAAG VPDVASLAAFCADPYFALPPPKSLDRDHFRALGPATAHLGDADAIATLTQAVVWSVAS AMAQCPRPPARLLVTGGGRRNATLMAGLAAICGLPVDPVEAVGLDGDMLEAQAFGYLA VRVLRGLPISAPGTTGVPRPARGGRVSVPRGRTQT" gene 613236..613853 /locus_tag="SKA53_03126" CDS 613236..613853 /locus_tag="SKA53_03126" /note="COG1915 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="possible outer membrane protein" /db_xref="CDD:28188" /translation="MTTTFKFVRTAMLAAPFAVAAGMSAAGGMAQPVETVAPTPVAPA PMMASTDWTGFYAGGQLGYADVTGSGTTADVDGAIYGVHGGYMYDLGSVVLGGEVDYD LSSIDNVAGTADLDDIMRVKARVGYDAGAFLPYVTGGVVRANTSGPDLEVDGDFYGLG VAYKYADNIVFGGEVLQHKFYEGDAATLTDTLRATTATARVSYQF" gene 614071..615504 /locus_tag="SKA53_03131" CDS 614071..615504 /locus_tag="SKA53_03131" /note="COG0215 Cysteinyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="cysteinyl-tRNA synthetase" /db_xref="CDD:10090" /translation="MTTIRLHNTKSRKREDFVPIDARNVRMYLCGPTVYDRAHLGNAR PSLVFDVLFRLLRQIYGAKHVTYVRNFTDVDDKINARAAAAGRAIGDITAETIGWYHA DLDALGALRPTHEPRATQYIAQMIAMITDLIAKNHAYEAEGHVLFAVESYAEYGALSG RSIDDMIAGARVEIAPYKRNPMDFVLWKPSGDGVPGWDSPWGYGRPGWHIECSAMAHD LLGDSFDIHGGGNDLQFPHHENEIAQSACAHPHGEFARYWIHNEMLQVEGKKMSKSLG NFFTIRDLLDQGIPGEVIRLVMLGTHYGKTMDWTEARRSEADLTLRRWYGILHGHGFG PDLIRALKADGKWQADAEFLGVLANDLNTPGAIARLHVLAKGKTPTALAGFAHGLDML GLVRDWAAIPLLDGAEAGPDVTPAVAARVDALLAARAAARAAKDWAQADDVRDILTSA GVQVTDVGGQATWSPGPDFDASKLGGL" gene 615504..617123 /locus_tag="SKA53_03136" CDS 615504..617123 /locus_tag="SKA53_03136" /EC_number="2.3.3.13" /note="COG0119 Isopropylmalate/homocitrate/citramalate synthases" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /db_xref="CDD:9994" /translation="MARDRLYLYDTTLRDGAQTQGVQFSAKEKNQIAAVLDGLGLDYI EGGWPGANPTDTEFFASPPVIRARFTAFGMTKRQGRSADNDDVLAAVLNAGTAAVCLV GKAHDFHVTTALGIGLDDNVANIRDSFAHLATLGREALFDAEHFFDGYKANPTYALEV IHAAFGAGARWIVLCDTNGGTLPDDIARIVTAVIASGIPGDHLGIHTHNDTETAVAGS LAAVMAGVRQVQGTLNGLGERCGNANLTTLIPTLLLKDPYASRFDIGVSHDALRGLRR ASRLLDDILNRVPTKQAAYVGASAFAHKSGLHASAIAKDPTTYEHIDPAAVGNSRIVP MSNQAGQSNLRARLADAGITVAADNPALARIVERIKEREAQGYAYDTAQASFELLARA ELGLLPNFFEVKRYRVTVERRRNKRNQMVSLSEAVVVTKVQGQKFLNVSESLGPDGSD RGPVNALARALAKDLGPYQAMIDDIELVDFKVRITGGGTEAVTRVIIDSEDGQGNRWS TVGVSANIVDASFDALIDAINWKLVRDGAQA" gene 617120..617887 /locus_tag="SKA53_03141" CDS 617120..617887 /locus_tag="SKA53_03141" /note="COG1562 Phytoene/squalene synthetase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11275" /translation="MSFDACAALVEKADPERFRAIMAAPVAARRLLFPVYAFNVEIIR APWLTKEPMIAEMRLQWWRDALEEIKAGGRVRKHEVVDALAAVLDAQGADLLDATIAA RRWDIYTDPFADWDDFDAYIHATSGAPMITTARLLGNKNAALVSDFAYATGVANLLRA LPVLLDRQRQPLPDPSAAAIAALAQRALARLDAARIARRDLPHHASAPLLLGHAAKPI LTQAAKHPAAALHGNLELTPLRQSMRLAHIALRGWWV" gene complement(617958..619178) /locus_tag="SKA53_03146" CDS complement(617958..619178) /locus_tag="SKA53_03146" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="transporter, putative" /db_xref="CDD:7243" /translation="MDMIDDSRAKRNVTVLVLAQAILGAQLPMMFVIGGLAGGQLASN PCFATLPISMIVFGSMTTAPWISPLMQRNGRRFGFMIGAFAGAMGAAVSAYGLYTGSF FLLLAGSYLSGIYMSAQGFYRFAATDTASEAFRPKAISFVMAGGLLSAVIGPQLNKLA QDAFVVPFLGSYMAIILLNLVGVGLFYWLDLPKGSRSEPKVLNPIKGRSRRELLRDPR IVVAIVCAMVSYALMNLVMTSTPLAVVGCGFTTNNANDIVSLHVIAMFAPSFFTGHLI ARFGVEKIIATGLVILAMAGGVAIAGVELANFFVALALLGMGWNFGFIGATTMLAGAH RPEERGQVQGLNDMLVFGMVTVASLAGGGLLNCAGGTTVEGWNAVNLAMIPFLVLAGA SLIWLSRQRRVVAP" gene complement(619189..620463) /locus_tag="SKA53_03151" CDS complement(619189..620463) /locus_tag="SKA53_03151" /note="COG1797 Cobyrinic acid a,c-diamide synthase" /codon_start=1 /transl_table=11 /product="cobyrinic acid a,c-diamide synthase" /db_xref="CDD:11507" /translation="MSFLISAPASGSGKTTVTLGLLRAFSRINPVRSAKSGPDYIDPA FHAAASGGPCVNLDAWAMTQDRIRALAAGSGPLIVEGAMGLFDGAPPAGKGSSADLAK ILHLPVVLVIDAGRMAGSVGALAQGFIRYDPDLRVAGVILNNVGSPRHEGMLRAALQD ITVFGALPRDAALHLGSRHLGLVQAQERPDLEAFLDHAADLVTQHLDLTALQKLNTPR PCAGASHHLAPPAQRIAIARDAAFAFAYPHLLNDWRAGGAELQFFSPLADDPVPDADF IYLPGGYPELHAGRIAANARFMDSLRHSKALIYGECGGYMVLGDGLVDGGGTRHAMAG LLRLETSFAQRKLHLGYRHLHAAQGPFAGHWAGHEFHYASTLRADGTPLFTASDATGA ALPPMGLIAGRVAGSFAHLIDAFAIVSPETAA" gene complement(619790..619926) /locus_tag="SKA53_t03239" tRNA complement(0..619851) /locus_tag="SKA53_t03239" /product="tRNA-Ser" gene complement(620519..621478) /locus_tag="SKA53_03156" CDS complement(620519..621478) /locus_tag="SKA53_03156" /note="COG0007 Uroporphyrinogen-III methylase" /codon_start=1 /transl_table=11 /product="CobA, uroporphyrin-III C-methyltransferase" /db_xref="CDD:9883" /translation="MRVIGATIGSSADDGNRQSQVATPLSLRHKSRHNGCMDNAPPLP GHDWPIMQPGWVWLCGAGPGDPGLLTLHALNALRQADVVIYDALVQEAILDWAPQAEL IYAGKRGGKPSAKQRDISLRLVDLARAGKRVLRLKGGDPFVFGRGGEEAQTLVQHGVP IRIIPGISAGIGGLAYAGIPVTHRDVNQSVTFVTGHDQSGNTPGNLDWASISKGSQVI VIYMGMKHIAQIAGHLIAAGRSLHEPVAVVTTATTQDQHVLETTLGTIVDDIAAAKLE PPAIICVGQSVLMRQVLDWQGMAAGAPARNLDPLGRGRAAESA" gene 621468..622511 /locus_tag="SKA53_03161" CDS 621468..622511 /locus_tag="SKA53_03161" /note="COG1903 Cobalamin biosynthesis protein CbiD" /codon_start=1 /transl_table=11 /product="cobalt-precorrin-6A synthase" /db_xref="CDD:2414" /translation="MTRKPQTELRRGWTTGACATAATKAALVRLWGGVFPRDVTITLP KGEMPSFPLALAEAGAGWASVGITKDAGDDPDVTHGALIVVRVSASAGGVVFKAGDGV GMVTKAGLPIAVGEPAINPVPRQMMTDVVAEMALLYGQSPDVVIEISVPGGAEIALKT WNPRLGIAGGLSILGTTGIVRPFSCAAWIASIHRGIDVARADGLVHVAGCTGATSETV VQAIYGLPDHAMLDMGDFAGGMLKYLAKHPVPRVTIGGGIGKITKLAQGAMDLHSARS QVDFGGLARMMDNPRLADANTALEAYQIAGPPLAQAVADAALAQVTARFAGIAFDIVV IDRAGAVLARAGI" gene 622508..623230 /locus_tag="SKA53_03166" CDS 622508..623230 /locus_tag="SKA53_03166" /EC_number="1.3.1.54" /note="COG2099 Precorrin-6x reductase" /codon_start=1 /transl_table=11 /product="precorrin-6x reductase" /db_xref="CDD:11807" /translation="MTLLLLAGTAEARALATALQGQDVIASLAGATRDPAPLPVPVHG GGFGGVEGFAAFLAQHEIHAVLDATHPYAARITQRSAMVCADMGVPFCQLLRPPWVAG PGDDWTEIASEDKAAEHIPQGATVFLGTGRQTLDGFANLTGRRVICRQIDAPEGPFPF DGGEFLVGRPPFSVADEIALFRRLGVDWLVVKNAGGQASATKLVAARDLRIPVLMIAR PALGAWSQVASVEAALAWVARL" gene 623212..623856 /locus_tag="SKA53_03171" CDS 623212..623856 /locus_tag="SKA53_03171" /note="COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase" /codon_start=1 /transl_table=11 /product="DNA-3-methyladenine glycosylase II, putative" /db_xref="CDD:9997" /translation="MGGALVIVRVITSDTCIREGAEHLARIEPRFAAIIPDLQPLPLR LKPDGFAALLGAIVSQQVSVASANAIMGRLVAAGMDDPRAIALASAEDLRALGLSAQK ARYAKALALADLDYPGLHALPNDAVIAQLTQVTGIGVWTAEIYAMFSLGRADVFAPGD LALQEAARVIFDLPDRPRDTALRAMAQAWAPWRSVAARVMWAYYAIIKDREGIR" gene 623853..624521 /locus_tag="SKA53_03176" CDS 623853..624521 /locus_tag="SKA53_03176" /note="COG0400 Predicted esterase" /codon_start=1 /transl_table=11 /product="phospholipase/carboxylesterase family protein" /db_xref="CDD:10274" /translation="MTRALQAQRREPLSGETQSCVIFLHGYGANGADLIGLADPLAEH LPDTLFLAPDAPEGCAGAPMGYQWFPIPWIDGSSEEESQAGLQRAADDLDAFLDGVMV DEDLLPEQVIVLGFSQGTMMALHVVPRREDPVAGLVAFSGRLLLADLLADEAQCRPPV LLIHGDQDDVVPPQSLPMAAEALQQAGWTEVYAHVMKGTAHGIAPDGLQVALAFMRDR LGME" gene 624661..625254 /locus_tag="SKA53_03181" CDS 624661..625254 /locus_tag="SKA53_03181" /note="COG1403 Restriction endonuclease" /codon_start=1 /transl_table=11 /product="HNH endonuclease family protein" /db_xref="CDD:11118" /translation="MTMAQTEFRTDFVRSSGALKHFPALVLNADYRPLSYYPLSLWPW QEAVKAAWLDRVVIVSEYAETVRSPSTEIRIPSVVVLKEYVTPQRQVAFTRFNLFLRD EFCCQYCGAKGDLTFDHVVPRAAGGVTSWENVVAACSGCNLRKGSKSLRQSGMSLRKP PRRPAASQLHNVGRKFPPNHLHHSWLDYLYWDAELDA" gene 625429..626883 /locus_tag="SKA53_03186" CDS 625429..626883 /locus_tag="SKA53_03186" /EC_number="1.1.1.49" /note="COG0364 Glucose-6-phosphate 1-dehydrogenase" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate 1-dehydrogenase" /db_xref="CDD:8373" /translation="MVSRVIPVETFDLVIFGGTGDLARRKILPGLFRRFRSGQTPEGS RIIGAARSEIDSDGYRVMIAEAIAEFGGDEASDSDSLAAFLATLDYVAIDAKGDGGWA DLAQKVRSDVVQAFYFSVAPSLFGDLAERLHSHKIATPDSRIVVEKPFGRDLDTARAL NAVLSTHFNEDQIYRIDHYLGKETVQNLMAVRFGNVLFEPLWNNHYVDHIQITVAETV SVAGRGSYYDKSGAMRDMVQNHLMQLLCLIAMEPPSRFGADEVRDEKLKVIRALQPVA PHHIVRGQYDAGPDGPSYRNDAENPRSFTESFVALKCHIANWRWAGVPFYLRTGKRMK ARSSEITVVFKDLGHTIFEGDTARHRNILSIRLQPNEGMDLQVTIKEPGPGGMRLIDV PLDMTFADALGADAEEVTDAYERLIMDVIRGNQTLFMRGDEVEAAWRWTDPIIQGWEA RNDVPKLYDAGSTGPEDAMMLLHRDGRKWREVKG" gene 626888..627559 /locus_tag="SKA53_03191" CDS 626888..627559 /locus_tag="SKA53_03191" /note="COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase" /codon_start=1 /transl_table=11 /product="6-phosphogluconolactonase" /db_xref="CDD:10237" /translation="MDLIEYPDAELMMMRLADVLASQIKQALLTQDRASLAVPGGTTP GPIFDTLCAVDLDWSRVDVLLTDERWVPETSDRSNTALLRRRLLVNRAAAARLIPLYA DAQAPEDRLADLAAGLEPVLPLSVVLLGMGADMHTASLFAGADQLELALTGDAPLVAM RAPGAPEPRITLSAAVLNAAMRRHIVIVGAEKRAALDQAQGLDPQDAPVAAVLKDTTV HWAEA" gene 627560..629161 /locus_tag="SKA53_03196" CDS 627560..629161 /locus_tag="SKA53_03196" /EC_number="5.3.1.9" /note="COG0166 Glucose-6-phosphate isomerase" /codon_start=1 /transl_table=11 /product="glucose-6-phosphate isomerase" /db_xref="CDD:16703" /translation="MVWDTLRAHHAATAERRFETLLDTARAADFSATAGDMVLDYAKT NIDAAARDLLFALLDQTGVAAKREAMFTGAAINETEGRAVLHTALRNLDGGPVMVDGA DVMPDVLATLARMADFAGSVRDGSIRGQGGAITDVVNIGIGGSDLGPAMAVKALAPYH DGPRCHFVSNVDPADIAAVLRQCDPATTLVIVASKTFTTIETMTNARTAQAWMAQSVS DTGAQFAALSTAADKTAAFGIDPSRVFGFADWVGGRYSLWGPIGLSLMIAIGPEAFRA FLRGAQAMDVHFRAADWHENLPALLAVVGIWHNQICGYPTRAVLPYDNNLNRLPAYLQ QLEMESNGKGVAMDGTDLPRASGPVVWGEPGTNGQHAFYQLIHQGTGVVPCEFLVAAR GHEDDLHHQHQLLVANCLAQSEALMRGRNLDEALASIADKFTGDELDRQARHRVFTGN RPSVTIAYPQLTPFVLGQIIALYEHRVFVEGVVLGLNSYDQWGVELGKELATALQPVV EGRAGLDGKDASTAALVGFLQRNGV" gene 629190..629645 /locus_tag="SKA53_03201" CDS 629190..629645 /locus_tag="SKA53_03201" /note="COG1338 Flagellar biosynthesis pathway, component FliP" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAAYAPFLMSLILIAAMVIEMRDGRLPNLLTMLPFVVFMALIVT APDPAVFAGRLVGAAMVFVVGLVLFAVAGFGAGAVKLLTGLALFIPPEDALATFAIFI VTMFAGTFIILQLHKRFAAQGSKWVILNKRVLPMSLPIGIAGLCAFWLI" gene complement(629649..629999) /locus_tag="SKA53_03206" CDS complement(629649..629999) /locus_tag="SKA53_03206" /note="COG0251 Putative translation initiation inhibitor, yjgF family" /codon_start=1 /transl_table=11 /product="endoribonuclease L-PSP family protein" /db_xref="CDD:10126" /translation="MSDITRHHTNARMSQLVTHNGIAYLAGQVGTPGATVAEQTAAIL SQIDALLAEAGTDKTKVLTAQIWLSDISTQFAAMNAVWDAWVPEGHGPARWTGEAKLA TPDYDVEIIVTAAI" gene complement(630031..630101) /locus_tag="SKA53_t03237" tRNA complement(630031..630101) /locus_tag="SKA53_t03237" /product="tRNA-Gly" gene complement(630148..632178) /locus_tag="SKA53_03211" CDS complement(630148..632178) /locus_tag="SKA53_03211" /note="COG3894 Uncharacterized metal-binding protein" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster-binding protein" /db_xref="CDD:13207" /translation="MTTDPLVIFTPSGKRGHFPVGTPVLTAARQLGVDLDSVCGGRGI CSKCQITPSYGEFSKHGVTVAPDALSEWNSVEERYDNIRGLKQGRRLGCQAQIRADVV IDVPAESQVHKQVVRKRAEVREITMNPSTRLYYVEVEEPDMHDPSGDLERLVIALRRD WALPALEADLGVLRNLQKALRKGAWRVTVAVHLGDAVFSPRIVAIWPGFYEGTIYGLA VDLGSTTIAAHLCDLRSGEVVASSGIMNPQIRFGEDLMSRVSYGMMNPTGSDEMTRAV REGMNALFVQIASEAQIDRDLIMDAVFVCNPVMHHLFLGIDAYELGQAPFALATSDAL SLRALELDLNLHPAARVYILPCIAGHVGADAAAVALSEAPDKSEDLVLIVDVGTNAEI LLGNREKVLACSSPTGPAFEGAQISSGQRAAPGAIEHVEIDPVTKLPRFKVIGSDIWS DEDGFGDTIAQTGVTGICGSGIIEVIAEMRMTGIVDGPGLIGSADQTGSPNCFADGRT NSYLLYDGTAAGGPLITVTNTDVRQIQMAKAALYSGARLLMDKFGVDKVDRVVLAGAF GAHISPKHAMVLGMIPDAPLDKVTSAGNAAGTGARIALLNTDARREIETIVRQIHKIE TAIEPRFQEHFVNASAIPNAVEPFPILNSIVTIPQINHNQGGDRGPRRRGRR" gene 632306..>632656 /locus_tag="SKA53_03216" CDS 632306..>632656 /locus_tag="SKA53_03216" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MCEGPISRVGRIWADGVEIAPDDLNMRVYTGSADQFPDPKMEAV EGAGHVPAYRGTAYVVIEDLDLGGFGNRIPQLTFEVIRAGLDGGLAAVVQGVALIPGT GEYGLATQPVYLSPR" gene complement(632764..633450) /locus_tag="SKA53_03239" CDS complement(632764..633450) /locus_tag="SKA53_03239" /note="COG2252 Permeases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIDQHPCPDLPRPAYLVRLGLRFCAVLAVVGLAVLGFDWLQTQI VRLEQDAALRAMSGLMVAVLILYAIVLATPFVPGVEIGVALLIIQGAKAAPFVYLATV CGLSLAFVIGQYVSLLWLIGLLRGLRLHRLAGWLDRVDGLARADRLRLLQQKMPAWLA PVFLRFRYVTVALAINTPGNIAVGGGGGIMLVAGLSRLFGTTATLLVIALATAPVPLA VWLWGVDVVR" gene 633562..635010 /locus_tag="SKA53_03244" CDS 633562..635010 /locus_tag="SKA53_03244" /note="COG0516 IMP dehydrogenase/GMP reductase" /codon_start=1 /transl_table=11 /product="inosine-5'-monophosphate dehydrogenase" /db_xref="CDD:25520" /translation="MEIREALTFDDVLLVPAASSVLPSTADTRTRVTGSIAMNIPLLS SAMDTVTEARMAIAMAQAGGIGVVHKNLDIAQQANEIRRVKRFVSGTVYNPITLRPDQ TLADAKDLMDRYRVTGFPVVGPDGRVIGIVTNRDMRFAQDDKTPVSVMMTTENLAILH EPADLDEARSLMQARRIEKLLITDHAGKLTGLLTLKDSEQAVLNPMACKDALGRLRVA AASGVGDAGFERSQALIDAGVDMIVIDTAHGHSEGVARAVERVKALSNEVQIVAGNIA TGEAARALIGVGADAVKVGIGPGSICTTRMVAGVGVPQLTAIMDCAQAAGDVPVIADG GIKFSGDFAKAIAAGASCAMVGSMIAGTDESPGEVILYQGRSFKAYRGMGSLGAMASG SADRYFQKEAASDKLVPEGIEGQVPYKGSAHAVVHQLVGGLRAAMGYTGCATVEEMRK NCTFVRITGAGLKESHVHDVQITRESPNYRVG" gene complement(634113..634622) /locus_tag="SKA53_03249" CDS complement(634113..634622) /locus_tag="SKA53_03249" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAQDAPAAIALAKSPENLMPPSAITGTSPAACAQSMIAVNCGTP TPATMRVVQIDPGPIPTLTASAPTPIRARAASPVAILPATIWTSFDSALTRSTARATP SEWPCAVSITIMSTPASISACDRSNPASPTPDAAATRSRPSASLQAIGFSTACSLSLS VKRPVSLPA" gene 635010..636179 /locus_tag="SKA53_03254" CDS 635010..636179 /locus_tag="SKA53_03254" /note="COG0144 tRNA and rRNA cytosine-C5-methylases" /codon_start=1 /transl_table=11 /product="possible NOL1/NOP2/sun family protein" /db_xref="CDD:10019" /translation="MTPGARVAAAITVLDQIGGGAFAEQALTGWARASRFAGAKDRAA VRDHVFDVLRCRRSLGESDGRLLMARLLQRDNVDLSHIFNGLDHAPDVLSETEAAALA LPLALSDAAACDLPDWLWPVWQASLGADALQAAQAQQARADVFLRVNQRRITLAAAMA ALAQDGVTAQAHDTVDGCLRVLDNPRRIRTAAAYLTGLVELQDAASQRAVQMVPVAAG ARVLDYCAGGGGKALAFADRHVADIFAHDIAPARMADLPDRAARAGVVITRLAPDQVA DHAPFDVVFCDAPCSGSGTWRRSPDAKWRLTRDRLDALCAIQNDVIGRAATFVAPQGL LAYATCSVLQDENDAVITRFLHCNPAWSVMLRDQRLPGPDGDGFFLSVLAQNNIS" gene 636349..638595 /locus_tag="SKA53_03259" CDS 636349..638595 /locus_tag="SKA53_03259" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensory box sensor histidine kianse/response regulator" /db_xref="CDD:13451" /translation="MVLIEAQMTEEGMLRIGLMTAGGLLLVLATVLAGRVAFGYWRSK QLETTAIRLMQDDLDCAFLTDAVGQVRYANTAAVMRFGNCAGWRLADLFGSFLANPHP FLQRLSHSAHLTGGSKEDVITRSGHFRLSVVVIGPALRLWRMDDLGDQAVAAARQHEN LPLPMMTLGPNNAVLHINVALRSLLGRSVANIDDLFDDLPLAPGQRHMLKTAQGPQPV IVAVAEGWGGARDIYLLADQRGDGPRFFTAGWHAIEDLPIPLLKIARSGEILGTNRES RQLLRIVNTDGLKLTDLLEGLGRPINDWLREAFEGRSGRSPQFLQGRGQSQDTFVQVT LNAAGGTTDPHLIAVLDDVTELKSLEAQFVQSQKMQAIGQLAGGVAHDFNNLLTAISG HCDLLLLRHDEGDQNYSDLIQIHQNANRAASLVGQLLAFSRKQTLQPEVIDLRETLSD LTHLLNRLVGEKVTLTLDHDPDLLPIRADKRQLEQVLMNLVVNARDAMQGAGDIRVTT QNLRLRDPMVKDRAVVPLGDYVQVKVIDHGHGISPDKLHKIFEPFYTTKRPGEGTGLG LSTAYGIVKQTGGYIFADSEVGKGTEFTLLFPRDNRPDEPVVVPEPTRREPVDGPATG VVLLVEDEAPVRAFASRALRLRGYSVLEADCAETALAMLEDSALHVDLFVTDVIMPGM DGPTWVRQAREARPDTKVVFISGYAEDAFSDSQPQVANAIFLPKPFSLITLTQTVQDQ LAETLPAA" gene complement(638592..639593) /locus_tag="SKA53_03264" CDS complement(638592..639593) /locus_tag="SKA53_03264" /note="COG0837 Glucokinase" /codon_start=1 /transl_table=11 /product="putative glucokinase" /db_xref="CDD:10704" /translation="MSHPANSYALVADIGGTNTRVALADGRRIITSTIRRYANADFPG LESVLRRYIADEGGVDPVAACVAVAGPVRDGRATMTNLDWTIDKTTLQRATKAETVAI LNDLQAQGHALGYLDAANIRTILPGPDTGAQAAKLVIGIGTGFNAAPVFDLPAGRIVT PSESGHANLPIRNEMELRLCQFVSTAHGFPAVEDVLSGRGLERVYAFLGNEDSDPREA AAQDIMAACADDSDPRAVAAARLFTRILGTVCGNLSLIQLPFGGVYLVGGVARAFAPH LTRFGFAEAFRDKGRFAGFMGNFAVHVIEDDYAALTGSAAHLVALGATGSLAAQSSS" gene complement(639602..640924) /locus_tag="SKA53_03269" CDS complement(639602..640924) /locus_tag="SKA53_03269" /note="COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase" /codon_start=1 /transl_table=11 /product="Putative Beta-glucosidase A" /db_xref="CDD:25453" /translation="MQFKRSDFPEGFLFGAATAAYQIEGHQFGGAGPTHWDTFAATPG NVLRAENGALACDHYHRFAEDLDLLRDAGMDAYRFSTSWARVMPDGRTVNPAGLDFYD RLVDAILERGLKPFQTLYHWELPSALADQGGWTNRDTCAAFADFTDVITDRIGDRVHA IATINEPWCVAYLSHFLGHHAPGLRDIRATARAMHHINLAHGMAMTRLRAKGMQNCGV VLNFDHTAPLDDSAGAAQAVATWDAIMNRWFIEAIAKGTYPAEALAGFAAHMPAGWRD DMAEISQPVDFLGVNYYTRHQVTTDLAQPWPHLASHEGPGAKTQMGWEIYPDGLQSFL TRLADDYVGDLPLFVTENGIAWDDHVVDGAVDDPERIQFIAEHIAATSRAIAAGANVQ GFFYWSLLDNYEWAFGYEKRFGMVHVDFDTLKRTPKASYHAFKSAIAR" gene complement(640926..642029) /locus_tag="SKA53_03274" CDS complement(640926..642029) /locus_tag="SKA53_03274" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="putative transcription regulator protein" /db_xref="CDD:11322" /translation="MARWQIVLLKLHRQFESALKDTDRMNLKQLSQKLGLSQTTVSRA LNGYPEVNEATRMRVERAAAQYHYRPSTRAKGLATGKALAIGHVIPISSKHEMVNPIF GDFIAGAGETYARHGYEMILCTADDGQEEQVYRGLKARRAVDGVVVHGPRLDDSRIRL LHDIGLPFVVHGRSSGATLPYAWLDVNNRHAFQRATDFLLDLGHLRIGLINGMEFMDF AHRRRDGYTIALLARGVPVDPSIMRSSEMTEDFGYQSTRDMLALGDPPTALLCASLIS ALGARRAVEEAGLIMGRDVSIITHDDDLSYLKNGGDIPIFTATRSSVRAAGARLAEIL LGGIADPELLHQNVLLEAELMVGRSTGPAPRKD" gene 642243..643508 /locus_tag="SKA53_03279" CDS 642243..643508 /locus_tag="SKA53_03279" /note="COG1653 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC alpha-glucoside transporter, perplasmic substrate-bindingprotein" /db_xref="CDD:11364" /translation="MKFKLYASVAAVALGSAAQAEQITVFGPWLGPDQANVEQVLAAF AAASGHDVRYSGSDSFEQQIVIDAEAGSAPNVAVFPQPGLAADMARRGFLTPLPAGTG DWLLENYAAGQSWVDLGTYTGPEGNPDLYGFFYKVDVKSLVWYSPENFEDAGYDVPET MEQLIALSEQIVADGGTPWCIGLGSGGATGWPATDWVEDMMLRTQPPAVYDAWVSNEL PFDAPEVVNAIEQFGLFARNDAFVAGGAGAVATTDFRDSPKGLFDSPPQCYMHRQASF IPAFFPEGTEVGADADFFYFPAYESEDLGSPVLGAGTLWAITNPSDAANDLIEFLKTP EAHEIWMGLGGFLTPHTGVDNAAFGDPTLSNMNDILLGATTFRFDASDLMPGAVGAGS FWTGMVDYAGGADAAEVAAGIQASWDAIK" gene 643615..644814 /locus_tag="SKA53_03284" CDS 643615..644814 /locus_tag="SKA53_03284" /note="COG1175 ABC-type sugar transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC alpha-glucoside transporter, inner membrane subunit AglF" /db_xref="CDD:10893" /translation="MTIIIGVGGCVAYFYFSNQFLDKVLLPAKGANAGRNINRANLIR PWLFLFPAIVALGLYLAYPVVATLWYSVTDRNQGGAFVGFANYQRMMAEPKFWEALRN NMLWLIIVPAASTAFGLLAAQLTDRIKWGAFAKSLIFMPMAISFVGASVIFKLIYDTR PVDQNQIGALNALWLQFDGGIGSFLILRLLPGALMIFAAALALFMAYTNAQAIRDKGF SANAALRAVLIAILGYVVYATLGLAYGAFTNVHPYGEPQTWMTIPGWNSFLLMVVLIW IQTGFAMVILSAALRGIPEETIEAAIVDGANPFQVFFKIKMPQIAGTIVVVWTTITLV VLKVFDIVFAMTNGQWETQVLANYMFDKLFRASDWGVGSASAMVIMLLVSPILVWNVY NARKEMR" gene 644814..645968 /locus_tag="SKA53_03289" CDS 644814..645968 /locus_tag="SKA53_03289" /note="COG0395 ABC-type sugar transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC alpha-glucoside transporter, inner membrane subunit AglG" /db_xref="CDD:10269" /translation="MDGIAGRTSALNWIVQISVVALVALWVFPTLGLLVSSFRTADQI SGSGWWGAMTASEQNLTLRTANPGDDGVQMLVDGVYIVQGQLFDKGSEAAIGVWGTSS LAISEFAPGDTAELSDGETLTVQADGVYIWTSPTQMTGRGQRVFVTATTPPEFTLQNY ERVLFSGDSTDGMSQAFFNTLTVTIPATIIPIVIAAFAAYALAWMDFPGRALLIAAVV GLLVVPLQLALIPLLRLHLEIGIGKGYLGTWLAHTGFGLPLAIYLLRNYMVGLPRDII ENAKVDGATDFQIFTKIILPLSFPALASFAIFQFLWTWNDLLVAKVFLIDATGETTVM TNQIVELLGTRGGNWEILATAAFVSIAVPLAVFFAMQRYLVRGLLAGSVK" gene 646054..647670 /locus_tag="SKA53_03294" CDS 646054..647670 /locus_tag="SKA53_03294" /note="COG0366 Glycosidases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24317" /translation="MAVNKDWWRGAVIYQIYPRSYQDSNGDGIGDLMGIVQRLPYIAS LGVDAIWISPFFTSPMKDFGYDVSDYCDVDPMFGSLADFDAVVETAHRLGIRVMIDLV LSHTSDQHPWFAESRANRNSDKSDWYVWADPKPDGTPPNNWLSIFGGSAWQWDARREQ YYLHNFLVSQPDLNFHSPAVQDALLDVALFWLNRGCDGFRLDTINFYMHDAELRDNPP LPKEMRNANIAPSVNPYNHQDHIHDKNHPDNVKFLARLRAIMEPYGAAAVGEVGDAQR GLEIMGQYTAGTDLMQMCYAFEFLAKDKPTAARIVDVMRQVDEVAGDGWACWAFSNHD VVRHATRWDLPAGGQRMFVSLLMALRGSACIYQGEELGLPEADVAFEDLQDPYGIQFW PEFKGRDGCRTPMVWDRDNHHGGFSAVRPWLPVPSEHLGLSVAAQEDEPGALLHHYRR AIAFRHSHPALSVGSHDKMQAQGDVIYFTRTSGDQTILCAFNVSETPSDFNPPAGDWV PIGAELGSAHISADGKLHFGPWQVCFALKR" gene 647694..648785 /locus_tag="SKA53_03299" CDS 647694..648785 /locus_tag="SKA53_03299" /note="COG3839 ABC-type sugar transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="ABC alpha-glucoside transporter, ATPase subunit AglK" /db_xref="CDD:13156" /translation="MAELKLTGVAKTYGGTVDVLKDINLDIKTGELIVFVGPSGCGKS TLLRMIAGLEKITGGELQIDGQVVNDVPPAQRGIAMVFQSYALYPHMTVRENMSFALK LAKKSKADIETAVARAAKILQLEDYLDRLPKALSGGQRQRVAIGRSIVRDPKVYLFDE PLSNLDAALRVATRIEIAQLKESMPESTMIYVTHDQVEAMTLATRIVVLANKGIAQVG TPLELYERPENEFVAQFIGSPAMNLLAGEIVGTGPVTKVKLHGGGIVTSAAPTRDSDM GLQVNVGIRPEDMIATDGEDYAFEGKVNITEALGEVTLLYFDKLGDNAAVIGKLPGIH TGLRGTSVRMAASPDKVQVFVNGQSLYYR" gene 648843..649619 /locus_tag="SKA53_03304" CDS 648843..649619 /locus_tag="SKA53_03304" /note="COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13153" /translation="MMQTPENRLKTALAAGQVQYGIWLSTGSAQLAEMAGLAGFDWCL IDAEHGPNAPTGLIAQLQALAATGASPVVRIASAEVWMVKQVLDQGCQNVLVPMVDDA ATAALMARAMRYPPDGIRGMGASSARASGYGSIPDYARTANAQVCLLVQAESRAALEN IDAIAITDGVDGVFVGPADLSADMGYPGQPDHPEVLAAIDHIIARTRAAGKIAGIITF DEGRVADYVSKGVNFMGVLTDVTLLNTALRGLAGRIKRSS" gene complement(649677..650741) /locus_tag="SKA53_03309" CDS complement(649677..650741) /locus_tag="SKA53_03309" /note="COG1410 Methionine synthase I, cobalamin-binding domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11125" /translation="MTRTIVESKTKTAIIGFDQPFCVIGERINPTGRKILAEELERGD FSRVEADAIAQVAAGATVLDINSGAVFSNKMAEDPRYADNNFVEPPLMAELIRRVQAV VDVPLCIDSSVPGALENGLAAAEGRPLLNSVTGEEERMELVLPLVKKYNVPVVAISND DSGISEDPDVRFAVAKKIVERAADYGIPAHDIVVDPLVMPIGAMGTAGLQVFTLVRRL REELGVNTTCGASNISFGLPNRHGINNAFLPMAMAAGMTSAIMNPVALPIGPLKIAEK RAEALAAGIILPEDLDDETFVTLFGLGSTFPRPGKEMEAIRAANFLTNNDPSGAEWIR FNRAPVKDGEGRARTGRRRK" gene complement(650751..651719) /locus_tag="SKA53_03314" CDS complement(650751..651719) /locus_tag="SKA53_03314" /note="COG0685 5,10-methylenetetrahydrofolate reductase" /codon_start=1 /transl_table=11 /product="metFprotein, homolog" /db_xref="CDD:28024" /translation="MTAGPDPARRLKETLMSLLPFFKSREPQTSAINPEIEALLRDYS IEVMPRTAEKVENFRDLLPAGTRVYIAHIDGTPIDDMVATARRLAHDGYKVMPHFPAR IIKDRATLADWIARYQGEAGVDQALLLAGGVAQPQGDFDSSMQLMESGLFRDFKRLHV AGHPEGNRDIDHDGSDTNVMAALRWKQRFSDTSDAQMAMATQFAFEAGPIIAWADALR DAGITIPIHIGIAGPAKLQTLIKFAIACGVGPSLKVLQKRAMDVTKLLLPYEPTEVVT QLAAHKAANPDFNITHVHFFPLGGIKTNAQWAIDNGGASALPASQI" gene complement(651703..652167) /locus_tag="SKA53_03319" CDS complement(651703..652167) /locus_tag="SKA53_03319" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLPMITRQAQDPATGVLRENTAGHRGPSRTARVMSKTDPACRRA MLEPLKRLRGNHMPDVTIVYWRDMPAQVIVGRGRRGTKLPLPERFEQAIDRAAMKSGA AESDDYMSGFRKADPYVTDGTDAEAAEAAVARIVAEYDQDRIKALIANDGWA" gene 652203..653315 /locus_tag="SKA53_03324" CDS 652203..653315 /locus_tag="SKA53_03324" /note="COG0248 Exopolyphosphatase" /codon_start=1 /transl_table=11 /product="phosphatase, Ppx/GppA family" /db_xref="CDD:10123" /translation="MTPKRPKGAGAFPKAVDSPAPQLADPATLYAALDLGTNSCRMLI AQPKGSQFHVVDSFSKSVQLGQGLESTGRLSRASMNRTISAMRICREKLHRHGVKRMR LVATEACRRALNGQHFVAQVRRETGLNLEIIRPEEEARLAVISCAPLVSVNTEQLLVV DIGGGSTELVWIDLTNVPKRERPRAIMRLHAGFKSDPGPFAAAKVVDWISVPLGVATL RDQFGDVEDDAARFALMSWFFEENLEAFAPSASAQSRKGFQIIGTSGTVTTVAASYLG LKRYDRTKVDGLRMTSDQIDAVIRDYLTLGPDGRRADPRIGRDRQALIMSGAAILQTL MRLWPTDRLSVADRGLREGLLYAQMSADGVLEDAPF" gene 653330..654061 /locus_tag="SKA53_03329" CDS 653330..654061 /locus_tag="SKA53_03329" /note="COG0293 23S rRNA methylase" /codon_start=1 /transl_table=11 /product="ribosomal RNA large subunit methyltransferase J" /db_xref="CDD:10167" /translation="MAKKPTTKNTSGRGQRDLHVKVKTARGRKLSSTQWLQRQLNDPY VKRAKADGYRGRAAYKILELDDKYRFLVPGARIVDLGCAPGGWLQVAVKRANALGERT SKAQGYVLGIDLQEVDPIPGAEIYQLDFMADDADVQVRDWLGGNADVVMSDMAASASG HKQTDHNRIIALCEAAAHFAFDVLNEGGTFVAKVLAGGAEGDLQKLLKARFEKVANVK PPASRSDSSEKFVVATGFKGRDTAG" gene complement(654111..654713) /locus_tag="SKA53_03334" CDS complement(654111..654713) /locus_tag="SKA53_03334" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQMLVFWDQNLVLLAVPKTGSTALEGALAPRASMVLRDPPHLKH APCYRYKRFLRPFFVQAGGKTPELMAIVRHPVSWLGSWYRYRNRDDLVGHQNSTRGIS FDDFVVEYCKGDPAPFAAVGSQDKFLRINDGEIGVQHLFRYEAWDQVTAFLEHRLSLT LTLKQINVSPDMDLTLSDDVRAQLHHKRAAEFDIWQAGQG" gene 654896..655975 /gene="recA" /locus_tag="SKA53_03339" CDS 654896..655975 /gene="recA" /locus_tag="SKA53_03339" /note="COG0468 RecA/RadA recombinase" /codon_start=1 /transl_table=11 /product="recombinase A" /db_xref="CDD:25418" /translation="MATADLLKMMDKKTADKEKALESALAQIERQFGKGSIMKLGGQN QMPEIEATSTGSLGLDIALGIGGLPKGRVIEIYGPESSGKTTLTLHSIAEEQKKGGIC AFVDAEHALDPQYAKKLGVNLDELLISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAA LTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSINRSGCMVIFINQIRMKIGVMFGSP ETTTGGNALKFYASVRLDIRRIGAIKDRDEVVGNATRVKVVKNKVAPPFKQVEFDIMY GEGISKTGELLDLGVKAGVVEKSGAWFSYGDERIGQGRENSKLFLKENPKIANEIEDK IRAAHGLEFAMSDSDGPADDDIVEM" gene 656125..658779 /locus_tag="SKA53_03344" CDS 656125..658779 /locus_tag="SKA53_03344" /EC_number="6.1.1.7" /note="COG0013 Alanyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="alanyl-tRNA synthetase" /db_xref="CDD:9889" /translation="MTSLADIRSTFLNYFEKQGHRVVPSSPLVPRNDPTLMFTNSGMV QFKNLFTGVETRDYSRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYF KSDAIPFAWELLTRDFGIDKSRLLTTVYHTDDEAFDLWKKIGVPEDRIIRIPTDDNFW RMGPTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNVVFMQNEQFEDGSMRP LDMQSIDTGMGLERIGALLQGKHDNYDTDVMRALIEASANATSSDPDGPGNTHHRVIA DHLRSTSFLIAEGVLPSNEGRGYVLRRIMRRAMRHAHLLGAKDPVMHRLVSALVQQMG AAYPELGQGQRLIEETLMNEEIRFKQTLDRGLKLLDDELAGLPEDAALPGEAAFKLYD TYGFPLDLTQDALREKGRAVDTDGFDAAMAAQKAKARAAWSGTGEAADSAIWFDVADL AGPTDFLGYDSLDVEGQIKALVADGAMVQQAGGAVQIVLNQTSFYAESGGQVGDAGIL QTDTGTAQITDTKKVAGVFIHFATVTNGTIAVGQGAALRVDAGRRAAVQANHSATHLL NEALRETLGDHIAQRGSLNAPDRLRFDFSHTKPVSADELAQIERDVNALIRQNTRVET RIMAPDDARALGAQALFGEKYGDEVRVVSMGRKDGSGKGAAGNTYSLELCGGTHVRQL GEIGAFVALGDAASSAGVRRIEALTGQAALDYLRAQDQRLADVAAALKAPASDVADRV KALMDERRTLANEVAQLRRELAMGGGAQGASPALQVNGIAFHAQVLSGVTGKDLPSLI DQIKTDLGSGVVLLIADTGDKAAIAVGVTADLTTRVSAVDILRAVTPELGGKGGGGRP DMAQGGGASTQNAEAAITQAKSILEKLS" gene 658776..659063 /locus_tag="SKA53_03349" CDS 658776..659063 /locus_tag="SKA53_03349" /note="COG5470 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27152" /translation="MTALWIAHVKVTDDAAYGEYARRATSAIADHGGVFLARGGAYEQ LEGPDRPRNVVARFPSLQAAHDCYYSTAYQDALSHAKGASQRELCIVEEIA" gene complement(659172..660989) /locus_tag="SKA53_03354" CDS complement(659172..660989) /locus_tag="SKA53_03354" /note="COG1217 Predicted membrane GTPase involved in stress response" /codon_start=1 /transl_table=11 /product="EF-Tu; elongation factor Tu" /db_xref="CDD:10935" /translation="MDIRNIAIIAHVDHGKTTLVDELLKQSGVYRENEATTERAMDSN DIERERGITILAKCTSVEWKGTRINIVDTPGHADFGGEVERILSMVDGVVLLVDAAEG PMPQTKFVTSKALALGLRPIVVVNKVDKADGEPDQAVDDVFDLFAALEASDEQLDFPV MYASGRAGWCDEQLDGPRKDLSALFDKVLEHVPMPAQISRREEPFQMLATTLSADPFI GRILTGRVEAGTLRAGETVKALSRNGDKLEQFRVSKILAFRGLSQQPIDVAEAGDIVT LAGMTKATVADTICDLSIDTAIPAQPIDPPTITVTFGINDSPLAGRDGKKVQSRVIRE RLMRESEVNVAIKVADTAMGDAFEVSGRGELQMGVLIENMRREGFELSISRPQVIFKD IDGVRHEPIEEATIDVDDEYTGAVVEKLTGPRKGELVEMKPAGAGKTRIIAHVPSRGL IGYHGEFLTDTRGSGILNRLFHGWAPYKGKIDGRRQGVLISMENGVSVSYALWKLEDR GKFFIGAQEAVYTGMIIGEHSRDNDLEVNPLKGKQLTNVRASGTDEAVRLTTPVTMSL EQAIAYIDDDELVEVTPNAIRLRKRFLDPHERKKNSRSA" gene complement(661068..661403) /locus_tag="SKA53_03359" CDS complement(661068..661403) /locus_tag="SKA53_03359" /note="COG2076 Membrane transporters of cations and cationic drugs" /codon_start=1 /transl_table=11 /product="multidrug resistance efflux protein, SMR family" /db_xref="CDD:11784" /translation="MPLHYIFLIFAIIAETIGTTALQASHQFTRFWPSVLVVIAYGLS FYLLAQTLRVMPVGVVYAMWSGLGIVMIAAIGYLVFGQRLDLPAVVGIGMILCGILVI HLFSHTSPH" gene complement(661406..662020) /locus_tag="SKA53_03364" CDS complement(661406..662020) /locus_tag="SKA53_03364" /note="COG1284 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11000" /translation="MSQTATTPAPHTRIEDAQAFALGTAMCALGVTMLTHLGLITGQT AGLAVLVSYGTGLSFGLVFFCVNLPFYWLAWLRMGPRFTLKSFLCVGLVSLMAESFPK LIVFEALDPLLGAVLVGAVTGLGLIVLFRHGASLGGIGILALFIQDRTGFRAGYTQLI FDLCLFAAAFAVIAPGLVLYSLAGAVVANLIIATNHRPDRYTGR" gene 662349..663200 /locus_tag="SKA53_03369" CDS 662349..663200 /locus_tag="SKA53_03369" /EC_number="1.1.1.41" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase" /translation="MDVVGTGAVNGTNGLPFASGVVTGGGALSTAVTGRTASTSSVSF AAGSGTGNFQESTFAVQGLTPDSIRITYNGATSDLARLGTGENYRVTTGTVDEYLTRV MRPGTAVSAYTYARLDFTNLQDSRIIRFVIGNDTNPANLSGTASYAVQLDGTGTQLAN GRVRSLNIDGDGTINANFATNAVNGTLTVRTRTSGVDNDTATQSARNDGFSLTGTRSG AGFTANATRTDCLFAEACVSKSTLSGNFYGQTGGEIAGIGVIDETATSATGLVETKGN FAFIGAQ" gene complement(663266..>664158) /locus_tag="SKA53_03374" CDS complement(663266..>664158) /locus_tag="SKA53_03374" /note="COG0538 Isocitrate dehydrogenases" /codon_start=3 /transl_table=11 /product="Isocitrate dehydrogenase" /db_xref="CDD:10409" /translation="CVFAHDHLQERAALVPGWTDPIVIGRHAFGDQYKATDFLMPGKG QLTMKFVGDDGTVIEKVVYDSPGAGVAMGMYNLDESIIDFARASLHYGLNLGWPVYLS TKNTILKAYDGRFKDLFQKVFEEEFADKFKAAGITYEHRLIDDMVASAMKWSGKFVWA CKNYDGDVQSDTVAQGFGSLGLMTSALMTPDGKIIEAEAAHGTVTRHYRQHQAGKATS TNSIASIFAWTGGLKHRAKLDDNAQLMSFATTLEKVVVDTVESGFMTKDLALLVGPDQ KWLTTEGFLEKVDQNLNAAM" gene complement(<664415..664515) /locus_tag="SKA53_03379" CDS complement(<664415..664515) /locus_tag="SKA53_03379" /EC_number="1.1.1.41" /note="COG0538 Isocitrate dehydrogenases" /codon_start=1 /transl_table=11 /product="isocitrate dehydrogenase" /db_xref="CDD:10409" /translation="MTKIKVESPVVELDGDEMTRIIWDFIKKKLILP" gene 664784..665518 /locus_tag="SKA53_03384" CDS 664784..665518 /locus_tag="SKA53_03384" /note="COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases" /codon_start=1 /transl_table=11 /product="ribosomal small subunit pseudouridine synthase A" /db_xref="CDD:28673" /translation="MTKTATARIDQLLGSLGYGSRGDIARMAKSGWITLDDARIWDAT TRIAVTPDLPARMVVSREPLDPLAGMVILLHKPLGMTCSHKEDGPLVYDILPDRWKRR QPVISTVGRLDKQTSGLLLLTDDGPLLHRIISPKQHIKKTYRATLARPLEGNEAAIFA AGDLVLQGEDKPLAPAELRVISPTEAVLTVTEGRYHQVRRMFAATGNHVTALHRDALG GLVLPDDLMPGQWRIIDGAQIATIFA" gene complement(665750..665823) /locus_tag="SKA53_t03938" tRNA complement(665750..665823) /locus_tag="SKA53_t03938" /product="tRNA-Met" gene 666002..667042 /locus_tag="SKA53_03389" CDS 666002..667042 /locus_tag="SKA53_03389" /EC_number="6.3.3.1" /note="COG0150 Phosphoribosylaminoimidazole (AIR) synthetase" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole synthetase" /db_xref="CDD:10025" /translation="MSKNGLTYADAGVDIDAGNSLVERIKPAAKRTARSGVMSGLGGF GALFDLKAAGFVDPVLVAATDGVGTKLRIAIDTGHVDTIGIDLVAMCVNDLVCQGAEP LFFLDYFATGKLELDQATRIINGIAAGCEASGCALIGGETAEMPGMYHKGDFDLAGFA VGAMERGADLPRDVVAGDVLLGLASDGVHSNGYSLVRRIVDLSGLGWADDAPFADGSL GEVLLTPTRLYVQSALAAVRAGGVHALAHITGGGLTENLPRVLPDDLGADIDLGSWAL PPVFGWLVQTGGMAQAELLKTFNAGIGMVLVVDAGRAEALAAVLAAAGETVHRIGTVT EGAGIRYTGALV" gene 667105..667635 /locus_tag="SKA53_03394" CDS 667105..667635 /locus_tag="SKA53_03394" /note="COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN" /codon_start=1 /transl_table=11 /product="phosphoribosylglycinamide formyltransferase" /db_xref="CDD:23019" /translation="MTADHAARPVLVLANDPAAGGLAKAAGLGVPHAVVDHRAYAKDR AAFEAALHAVLLEVRPDIICLAGFMRILGAEFIRQWEGRILNIHPSLLPKYRGLHTHA RALEAGDTHHGCSVHEVTAALDDGPVLGQARMPVLPGDTPETLAARLLPLEHALYPAV LRRFAAGDLRPVMLGG" gene 667693..668850 /locus_tag="SKA53_03399" CDS 667693..668850 /locus_tag="SKA53_03399" /note="COG0349 Ribonuclease D" /codon_start=1 /transl_table=11 /product="ribonuclease D" /db_xref="CDD:10223" /translation="MKIISTTADLAAFCTQAAKRAYVTVDTEFLRERTYYSKLCLVQM AYRDAAGEDAVLVDPLAEGISLDPLYDLFRDPGVVKVFHAARQDLEIFHVDAGVIPAP LFDTQVAAMVCGFGEQAGYETLVRKIAKAEVDKSSRFTDWSRRPLTDAQAEYALADVT HLRDVYEYLANRLAKSGRTKWVAEEMAVLNDPATYQSNPDEAWMRVKTRTTSGRFLAI VRELARFRETYAQTRDIPRSRVYKDDALVELASTKPLNENDLNRSRLLLREARKGEIA DGILASIKAGLAAKPGDLPEPDLSRAKLQVNPALADMLRVLLKAVTDDAGVAPKLIAS SADLDAMAAGMRDVSALNGWRREVFGDVALQLCEGKVGLAVKGQKVVTVPL" gene 668883..669293 /locus_tag="SKA53_03404" CDS 668883..669293 /locus_tag="SKA53_03404" /note="COG2166 SufE protein probably involved in Fe-S center assembly" /codon_start=1 /transl_table=11 /product="Fe-S metabolism associated family protein" /db_xref="CDD:11874" /translation="MTNAAFEELVATFEFLDDWEDRYRHVIDMGRAMDPLEDALRVPA TKVDGCASQVWLVPQIKDDVFTFRGESDAMIVRGLIAVLRTLYDDQPVSEVVKIDASA ALGRLGLNDHLSAQRSNGLRAMVDRIRQTAAAAL" gene complement(669265..669912) /locus_tag="SKA53_03409" CDS complement(669265..669912) /locus_tag="SKA53_03409" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MISDAELSHDGLPPAGQGQILLIACGALAREILALKAANSWAHM DLHCLPAILHNHPDRIIPALRAAVAKHGADYHDIFVVYADCGTGGLLQAACDDMGLRM VAGPHCYAFFEGVDAFAARDEMTAFYLTDFLVRQFDAFVWEPLGLHKHPALRDMYFGN YEKLVYQAQTDDAALTEKAQDCAARLGLAFERRFTGYGDLATTLASVTAPPPPSA" gene complement(669902..670081) /locus_tag="SKA53_03414" CDS complement(669902..670081) /locus_tag="SKA53_03414" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPLEKLAIILAAVIAASGVTIALGAWVAGAAGLAPMLGLAVISI AVLLASVLLRRHRDQ" gene complement(670134..670841) /locus_tag="SKA53_03419" CDS complement(670134..670841) /locus_tag="SKA53_03419" /note="COG5012 Predicted cobalamin binding protein" /codon_start=1 /transl_table=11 /product="Putative dimethylamine corrinoid protein" /db_xref="CDD:14142" /translation="MSDQDDEIILSELSDEDLVAQMYDDLYDGMKEEIEEGVNILIAR GWTPYRVLTEALVGGMTIVGHDFRDGILFVPEVLLAANAMKGGMFILKPLLIATGAPR VGKMVIGTVKGDIHDIGKNLVGMMMEGAGFEVIDLGINNSVESYMGALESEQPDILGM SALLTTTMPYMKVVIDTLVEKGVRDDYIVLVGGAPLNEEFGRAIGADAYCRDAAVAVE TAKTLVARKHNQGAVHA" gene complement(671112..672131) /locus_tag="SKA53_03424" CDS complement(671112..672131) /locus_tag="SKA53_03424" /note="COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain" /codon_start=1 /transl_table=11 /product="methionine synthase I" /db_xref="CDD:10516" /translation="MTNALSKLLETRDWLMADGATGTNLFNMGLMSGDAPEMWNIDEP AKIRALYKGAADAGSDIFLTNSFGGNASRMKLHGAEGQVHELNKVAAALGRDIADASG RTIVVAGSVGPTGEIMSPMGTLTHERAVEMFHEQAEGLKAGGADVLWVETISAAEEFA AAAEAFALAGMPWCGTMSFDTAGRTMMGLTSADMVKKVGKLAHQPLAFGANCGTGASD LLRTVLGFAAAGPTLPLIAKGNAGIPKYHDGHIHYDGTPELMADYAVLARDSGATIIG GCCGTTPDHLRAMRHALETRPKGTAPTLDAITAALGGFSSASDGTDGAGPEAAPRRGR RAKRD" gene complement(672149..672463) /locus_tag="SKA53_03429" CDS complement(672149..672463) /locus_tag="SKA53_03429" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSTFDDRQQAFEAKFAHDAQMQFKAEARRNKLLGLWAAALLGKT GEDAAAYAIDVVKSDLEETGEEDVFRKLSGDLGDLADAATIRAKMAALMAEAKAQLMT EL" gene 672596..673357 /locus_tag="SKA53_03434" CDS 672596..673357 /locus_tag="SKA53_03434" /note="COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole-succinocarboxamide synthase" /db_xref="CDD:27785" /translation="MARRKKIYEGKAKILYEGPEPGTLVQYFKDDATAFNAEKRAVIE GKGVLNNRLSEFFMTGLGQIGIPTHFIRRLNMREQLIRQVEIIPLEIIVRNVAAGSMA KRLGIEEGTQLPRPIVEFSYKDDALGDPLVPEEYIIAFGWASQQDMDDIVSLALRVND WMSGVMYGVGIKLVDFKIEVGRVWDNEFPRLLLADEISPDSCRLWDIETGQKLDKDVF RRDLGNLTDAYTEVAKRLGVMPSNVTHRPKPTLIN" gene 673398..673628 /locus_tag="SKA53_03439" CDS 673398..673628 /locus_tag="SKA53_03439" /note="COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase, PurS protein" /db_xref="CDD:11538" /translation="MKARVYVMLKTGVLDPQGEAVRHALGSLGFDGVQGVRQGKLIEL DLADGTDEAVIAQMCDKLLANTVIESYRIEVL" gene 673629..674297 /locus_tag="SKA53_03444" CDS 673629..674297 /locus_tag="SKA53_03444" /note="COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain" /codon_start=1 /transl_table=11 /product="phosphoribosylformylglycinamidine synthase I" /db_xref="CDD:9922" /translation="MRAAVVVFPGSNCDRDMAVALRAAGADVTMVWHKDASLPDGVDL VAIPGGFSFGDYLRCGAIAAQSPICRAVVAHAGRGGYVLGVCNGFQVLAETGLLPGAL MRNSGLKFICKTVDLIVQTSDTAFTAGYQAGQAIRLPVAHHDGNYTVDPDMLARLQGD DRIAFRYAQPLNGSVEGIAGLVSDNRRVLGMMPHPERAVDVGHGGTDGQALFRELVAQ VVAA" gene 674343..676097 /locus_tag="SKA53_03449" CDS 674343..676097 /locus_tag="SKA53_03449" /note="COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transport sensor protein DctB, putative" /db_xref="CDD:13451" /translation="MNDTVPQGSKRAARRWYRRIALGLFTLFAASVMYVTNELTTQRY TETISNRSELRLALYSANLMSELQRNSVVPQLLARDPELISALNSQDYSRSTARLMSF VDEIGAAALTLLDSEGRAVAATNRNELGVNHSDRPYFVDALRSNRTVYSTFRMDTGAY AFIFSRKIESNGQVLGTIMVEVDVGRMERGWAGVTDAVFVTDAQGKIIMSTEPLWRGL QERDALARQPASSAIERALRATQSWAMAPAEAYLRGEAVLRREARVPHQGWQIVNFTT YDSVREKVNGILALQVMGFAIILAVSFWVMSRQTASRLVLFQRESAELRALNRRLQRE IAERERVEKTLQVAEQTIAQSSKLAALGEMSAAVSHELNQPLAAMKTYLAGARLLLQR QRPDEALSSFQRIDDLLERMGAITRQLKSYARKGSDAFEPVDTRAAVSTALAMMEPQL KTRSVNIVRTLPTEPVMIMGDRLRLEQVIINLLRNALDATKTSDNPTIEILLAVGDTV SLQIRDNGEGIENLDELFEPFYTTKQPGDGVGLGLAISSGIVNDLGGRLTARNAADGG AIFEVQLPAYMLGQAAAE" gene 676107..677438 /locus_tag="SKA53_03454" CDS 676107..677438 /locus_tag="SKA53_03454" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="C4-dicarboxylate transport transcriptional regulatory protein DctD" /db_xref="CDD:11911" /translation="MSKAMKIAIVDDEKDMRQSISQWLALSGFDTETFASAEDALKGL GSDYPGIVVSDIKMPGMDGMQFLRKLKGVDSTLPVIMITGHGDVPMAVEAMRIGAFDF LEKPFNPDRMTELAKKAANARRLTLDNRALRRELSDGSLLMKKLIGQSPSMERLKEDI LDLGQADGHVLIEGETGTGKTLIAHALHAVGARANRKFVLLSCSAYDEDTLTRIIFGP GHDDEPIPAIEEARGGTLVLEDIETLSHALQSRLLTAINDQGTPAETRIVAICNLQEQ DKTCESVLRPDLFYRLAALRITVPPLRQRGEDILTLFTRLGEQFADEYGCDAPQVSAQ EAAQLLQAPWPGNVRQLINVAERAVLQNRRGSGSIASLLMTETEDSQSAMTTEGKPLK EFVEAFERMLIDNTMRRHRGSIVAVMDELCLPRRTLNEKMAKYSLQRSDYL" gene 677860..680457 /locus_tag="SKA53_03459" CDS 677860..680457 /locus_tag="SKA53_03459" /note="COG1530 Ribonucleases G and E" /codon_start=1 /transl_table=11 /product="Ribonuclease E" /db_xref="CDD:11244" /translation="MDKMPKKMLIDATHAEETRVVVVDGNKVEEFDFESQFKRQLAGN IYLAKVTRVEPSLQAAFVDYGGNRHGFLAFAEIHPDYYQIPVADREALMAEERAYAES LKAEEDEEDAPKQPRRRTRSKSRAAPVEGSDAVVTSGDDPVGLETIDLDDDLEGSSPM ELVGETPVETPAADEDIDDATADDAIESVAETDDIDDMRPVRKPRPRRYKIQEVIKVR QILLIQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITNAVDRKKLKEI ASEMTVPDGAGLIIRTAGSQRTKAEIKRDYEYLQRMWEQIRELTLKSIAPARIYEEGD LIKRSIRDLYSKDIDEVIVAGEAGYRSAKDFMRMIMPSHAKNVKFYAEPMPIYARYQV ETYLAGMFNPTVQLPSGGYIVIGITEALVAIDVNSGRATKEGSIEQTALKTNLEAADE VARQLRLRDLAGLIVIDFIDMDERKNNAAVEKRFKDKLKTDRARIQVGRISGFGLMEM SRQRLRPGMLEATTQMCSHCHGTGLLRSDDNVALSILRQLEEEGVRARSKEVLVRAPI AIANFLMNGKRENIAEIEACYGMSVRVECDPVLISPDFVVEKFKTATRIVPEAAPIVA SALLMDDDEDDDLIIETPDEDEEDAVAPTPKAAAAVLDAPEADGEDRPKRKRRRRRRR RTGAGDAPQAEGAEPSDAEDEALPLSEPATASATEDKPKRRRTRTRKSADAAPQEVVE TVAEAVMDTPVAAQAAQEPAQDATPAKRIRSRRKPAVAQDAAPEPVATAEIAVTEDVP APAKRRSRAKPKPTEPAPAAVPDPVAEAPTDSAPAAEPAPTPQPLPDSAPEPAADKPR RKGWWSLGK" gene complement(680589..680816) /locus_tag="SKA53_03464" CDS complement(680589..680816) /locus_tag="SKA53_03464" /note="COG0425 Predicted redox protein, regulator of disulfide bond formation" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10299" /translation="MTYDAELDARGLLCPLPVLKARKRLGALASGQVLRMTADDPAAI VDVPHFCAEAGHKMLDCQDTDGAQVYLIRKG" gene 680835..681665 /locus_tag="SKA53_03469" CDS 680835..681665 /locus_tag="SKA53_03469" /note="COG0785 Cytochrome c biogenesis protein" /codon_start=1 /transl_table=11 /product="putative cytochrome c-type biogenesis protein CcdA" /db_xref="CDD:3190" /translation="MFHFVHQDVTQQGVTLRDCWSRNVVMLDTGLIFDAGLLPAMIVA LAAGVLSFLSPCVLPVVPPYLAYMGGVSVTEMEKASTARRRVFIAALFFVMGLSTVFL LLGIAFSTMGRMLIGVQEYFVIGAGLVVMVLGAHFVGVFRIGFLDREMRLDAGDKGGS AFGAYLLGLAFAFGWTPCLGPVLGAILSLAASEADVGRGTVLLGAYAVGLGIPFLLVA AFFPRLKGVMGWMKRHMRQIEATSGLLLWTVGLMMLTGQFAAFSFWLLERFPFLASVG " gene 681695..682963 /locus_tag="SKA53_03474" CDS 681695..682963 /locus_tag="SKA53_03474" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTSDLKPVSLRRVFHIPGYDPIHPRRYRELYRSESATQAHISGY DITVQGGSAGDIFHWFVQARIAGQAVQARIDVLVWADIVRASMAQSVGATYLQLVQTA LIYLGTGTLRRLMWLRKGPIIAAFYPVGMLLGQLLLAVLAGWWLGGLVQAGLGAALGA AGWGGGAVATDVIWLVRLGVLACVALFLLRWFKARDNRVFAHYLMHDYAFSAQHLGAT PPALDDRLAQFTGQIARALQDPVDEVLVVGHSSGAHLAISVVADLIRAGHVPAGGPRL ALLTLGQVVPMVSFLPQARQLRADLAYLATQDALTWVDVTAPGDGCCFALCDPVAVSG VTPPGKRWPLVISAAFTQSLSPARWKALRWRFFRLHFQYLCAFDRPKDYDYFQITAGP LTLADRFRDRAPSASRIDVAASKYTSMALP" gene 682960..684315 /locus_tag="SKA53_03479" CDS 682960..684315 /locus_tag="SKA53_03479" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="cytochrome P450 family protein" /db_xref="CDD:25378" /translation="MTLPPKPVARPDKVSLWRYMRLFRRDILSAQPARLYRAWMAEFR TPFFRSFLINDPALLREVLKDNPDSYPKSDRIGAGLRPLLGKSVFLTNGAQWRAQRRI IDPAFEGGRLRDTFPGIVAAGQAGCGRFAAMADDTPRAIDAAASHIAADVIFRTLFSL PIEDETAGEVYHRFQAYQQAQPILNLAAFLPLLRWMPAFFRPGVRGQARAIRRLIADL TQARLDQIAAGTAPDDLATKIMTTPDPETGKTFSKAEMVDQVAIFFLAGHETSASALA WALYLLATHPDWQDKVAAEAATFDAVFSDLSRLSATRDVFREALRLYPPVPMMVRQAS KATIFRSRRVPAGAQIVLSPWHLHRHERIWDAPDAFDPARWQDGATKTAQRDGYLPFS AGPRMCSGAGFAMIEGVVLLAQLVGRFRFAPVAGQVPVPTAHLTVRARDGIMLRITPR D" gene 684373..684495 /locus_tag="SKA53_03484" CDS 684373..684495 /locus_tag="SKA53_03484" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKQSRDTLPEKRITPATLNDSEHQDIARLSSLRGALYAKD" gene complement(684480..684713) /locus_tag="SKA53_03489" CDS complement(684480..684713) /locus_tag="SKA53_03489" /note="COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13568" /translation="MNHRRPAKHSLTLRGHRTSVTLEDIFWTAFCDIARRDAKTINGL AAEIDAERGDIGLASAIRIYVLERSLAQGQSLA" gene complement(684714..684890) /locus_tag="SKA53_03494" CDS complement(684714..684890) /locus_tag="SKA53_03494" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKPVNLNQARKERDRAAAKAKADENAIRFGRTKAERLLDAARAQ KAHDHLSQLKFEED" gene complement(684887..686278) /locus_tag="SKA53_03499" CDS complement(684887..686278) /locus_tag="SKA53_03499" /note="COG0114 Fumarase" /codon_start=1 /transl_table=11 /product="Fumarate lyase" /db_xref="CDD:9989" /translation="MTATRIETDSFGPLEVQADRYWGAQTQRSILNFPIGWEKQPVAI VRGLGVIKQACAIANKDRGALDSKLADAIIAAAAEVVAGKLDDHFPLVVWQTGSGTQS NMNANEVISNRAIEMLGGVIGSKTPVHPNDHVNMGQSSNDTFPTAMHIAIATTARDVL LPGLEKLHAALAAKQEDFNDIIKIGRTHTMDATPLTLGQEFSGYTHQVAMGIRRIKGA LPAIYELAQGGTAVGTGLNSPVGWGETVAAHMAQITGLPFVTAPNKFEALAAHDALVE MSGSLKTVAASLYKIACDIRMLGSGPRCGLGELMLPENEPGSSIMPGKVNPTQVEAIT QVCAHVMGNDAAVGFAGSQGHFELNVMKPMMAYNVLQSMQLIGDACGAFTDNCVVGIQ ADRTRIEKLMRESLMLVTALAPTIGYDNATTVAKTAHKNGTTLKEEAIKLGFVDEATF DRVVRPEDMIGPK" gene complement(686344..686841) /locus_tag="SKA53_03504" CDS complement(686344..686841) /locus_tag="SKA53_03504" /note="COG3814 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLVKNDRSSAVPNTIDYGNLMHRAMRGLIQQVLENVAKTGLPGN HHFFVTFDTMHPDVEIADWLSDRYPGEMTVVIQHWFANLDVTDEGFTITLNFGDNPET LYIPYDAIKTFVDPSVEFGLRFETQDEPTAITEAPMHEMAEPDDTKPAARKEAEVVSL DKFRK" gene complement(686872..688122) /locus_tag="SKA53_03509" CDS complement(686872..688122) /locus_tag="SKA53_03509" /note="COG2059 Chromate transport protein ChrA" /codon_start=1 /transl_table=11 /product="chromate transporter" /db_xref="CDD:11767" /translation="MKELFTVFGRIGLLSFGGPAAQIALMHRELVDKRSWLTEAQFLR ALSFCMLLPGPEAMQLATYAGWKRGGVIGGLVGGGLFVLPGAMVIAALALLYGAYGNL PVVQALFLGVKATVIVIVIAALIKIAGRALVSRAHMLIAGAAFVALFFFAVPFPVVVL MAGIAGAVMPHDRTTTAPPPGGYLRSAGRVLLIGAALWAAPVVIVALSGSAFLLDVAS FFSLMAVVTFGGAYAVLAYMTQEVVFSYGWLTTPQMMDALGLAETTPGPLILVTQFVA MVAGLAQGGTALALAAGALTLWVTFVPCFIWIFAGAPLIDWLDGRPRLRAALAGITAA VVGVIANLSLWFALHVMFSSVTRLQSGVISMVIPDPASLQPLVIGLAGLAAILLLRQK WPLALVLPLVAITALGLTFALGGV" gene complement(688134..688781) /locus_tag="SKA53_03514" CDS complement(688134..688781) /locus_tag="SKA53_03514" /note="COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26816" /translation="MRCLVPFFFALSVTPAVACETALLLTIDVSNSVDAAEYRLQTDG LADALRDPAIVDIMLRDRVAVAVVQWSGVADQVVAIPWERISHAGQLDQLSRRARTME RAFVLSGTATAEALLFSLAQFDAVADCKRKVIDISTDGTANAGGDVRLVRGRAERAGV TINGIGIESMGRTITNFLQSAVITRDGFVMTARMHQDYPAAIRAKILREISKVVG" gene complement(689213..689569) /locus_tag="SKA53_03519" CDS complement(689213..689569) /locus_tag="SKA53_03519" /note="COG0591 Na+/proline symporter" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /translation="MDIINIIFALASIGLGFFGWLAPRYTLETLDLQAGPSGMGPSEI RASAGALFVGMGVGALMIGGPEAYAMLGFCWLGAAVGRATSLALDGTSRKKWTFFGIE AVVGLGALALNLPLAL" gene complement(689618..690967) /locus_tag="SKA53_03524" CDS complement(689618..690967) /locus_tag="SKA53_03524" /note="COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases" /codon_start=1 /transl_table=11 /product="Coproporphyrinogen III oxidase, oxygen-independent (HemN)" /db_xref="CDD:10505" /translation="MDHIANLRRMGLFDARVPRYTSYPPATAFTAGVGADFQRASLAA LDPAVPVSVYIHIPFCERLCWFCACATQGTSTLKPVENYLRVVQLELALLARALPAGI RMGQMHWGGGTPTILPPAMIRDLAQAVKAVIPPSDHFSFSVEIDPTLVDDAKIAMLAK MGMTRASIGIQDFAPDVQAAIGREQSFAATKTCVDSLRAAGITSLNADLVYGLPHQTQ PKLADTIAQVRSLDPDRIALFGYAHVPTFSKRQKLIPDAALPKEEDRYALAQQAARAF TDAGYLPIGIDHFGKPADSLTQAMQAGRLRRNFQGYTDDTCPSLIGIGASSISHYAGG YVQNAAATAAYIAQIAAGDLAGHRGYAMGPQDRLRAQAISMLMCDFQIDLTVLHQHPE AAILAPVHDAVLDQFAGMVVRDGDTIRILPQGRPLTRIIANAYDGSGAMAARYSQAS" gene complement(691028..691633) /locus_tag="SKA53_03529" CDS complement(691028..691633) /locus_tag="SKA53_03529" /note="COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems" /codon_start=1 /transl_table=11 /product="regulatory protein SenC" /db_xref="CDD:3137" /translation="MKSVIIGSGVLAVAVGLGVYTWQTTNAVPDPCGNTTVAGAAIGG PFELVSETGATVTDTDVITKPTLVYFGYTFCPDVCPLDSMRNAIAADILADQGVDIGT VFISVDPARDTPQVVGDFTDNFHADMIGLTGSPDQVRAASQAYKTYYRAVEGDPEYYL VDHSTQTYLMFPDTGFATFFRRDTPAEQVAEITACFAGQLG" gene complement(691694..692146) /locus_tag="SKA53_03534" CDS complement(691694..692146) /locus_tag="SKA53_03534" /note="COG2847 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12200" /translation="MKTTFLASLALLAIATTATADSAISVSDARAFETAPSAMAGGGF FAITNTGTSDDTLIAVLADFPRVQLHTTEFENDIARMVHVDTIPVPAGETVTLEPGGL HVMFMGLQGNPLMAGATIDATLVFEQAGEIPVTFAIVKRDMAGHGKTH" gene complement(692196..692594) /locus_tag="SKA53_03539" CDS complement(692196..692594) /locus_tag="SKA53_03539" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQPQRHTTATARHPRLIWRMVLASVLSMALVLVGFGHRPAQAEP QAIAYLLAGGDWADLCAQDDLPHRAGDHCAACILAKAMTLPAPVLTPRATVTAQPMVW TMQATARPELKIANAYPARAPPFADHSTSL" gene complement(692711..693733) /locus_tag="SKA53_03544" CDS complement(692711..693733) /locus_tag="SKA53_03544" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="ABC polyamine transporter, periplasmic substrate-binding protein" /db_xref="CDD:10556" /translation="MGATCVMALATTAFAQDAELLVFDYSGFEMPEYHQGYIEKHGAS PTFTFFGDEDEAFQKLRSGFRADVSHVCAPSVTRWTESGILEPWDTARITAYDDLNAS LTGEEIGAGQTYFIPTDFGSTAIAYNPDEVPAADVASLQVFTNPAYAGRMTLPDNVDD AFALAYLATGVTNWQEVTDEQFEAAANWLRAVHPNLRTYWTDPAELAQLLSSGEILVS WAWNETYPTMVEEDRPIAFQRQATEGSSLWLCGYVKLAEGQGSVDKAYDYLNAFLAES SVLPLLEAGYGSANAAALNALVTEEDLVASGLEDIDVPILAQLPTSNDDRERMAETFE LIKAGF" gene 693901..694635 /locus_tag="SKA53_03549" CDS 693901..694635 /locus_tag="SKA53_03549" /note="COG5486 Predicted metal-binding integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14570" /translation="MGTAHWLLVFGLILVAWSALFVLAVPADLRSAARFYGADFWDTL CMVTLDGAGYANAALMWALMAAAMMLPSALPAFATHDDLGRQTGVPFLPLVLGYGCVW IGFALTAAALQLGLYRFGLISAIGDSLSVWLTAGLLLGAGLYQFSPVKEACLAKCRRP LTFFMQHWDEGPWRNGVRLGLVCLGCCWALMLLAFVGGVMNLAFMGVATLIMVGEKMD IVGRYITRPLGVILIFGAFLVLLRTV" gene 694649..695290 /locus_tag="SKA53_03554" CDS 694649..695290 /locus_tag="SKA53_03554" /note="COG5588 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27147" /translation="MALDQNALVGTVPWAIKGELILNCNCTVFCPCVVSLGKHAPTEG YCQAWAGIRIDDGHYGDEDLGGLNVGLVLEIPGLMARGNWKAAAYIDDRASAAAYDGL LNIFTGKARGTTGLFKVLVSEFLGAERAPVVFETEGKARRLMVGKAIQGEIVPVVGKD PDTDIVVTNTGYWMGPDITVATATKGRVRAFGRVWDFDGRSAEICQIDWHGPQ" gene 695354..696337 /locus_tag="SKA53_03559" CDS 695354..696337 /locus_tag="SKA53_03559" /note="COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="oxidoreductase, zinc-binding dehydrogenase family" /db_xref="CDD:10474" /translation="MFKALIVDKDDTGKTHAAVQDITLDRLPAGDVTVAVDYSTVNYK DGLCIGPGGGLVRHYPHIPGIDFAGTVEASDDPRYAPGDKVVLTGWRVGEAHWGGYAQ KARVKADWLVPLPDGLTTRAAMAVGTAGFTAMLAVMALEDHGIKSGPVLVTGAAGGVG SVATAILAHLGYQVAAVTGRPETADYLTSLGATQIVAREDLAETVKRPLEGETWGGCV DAVGGAMLARVLGQMEYGASVAAVGLAGGANLPATVIPFLLRGVNLLGIDSVMQPYDN RLRAWARIARDLPMDKLDAMIQPATLAELPQLGADILAGRVKGRVVVDVNA" gene 696330..697544 /locus_tag="SKA53_03564" CDS 696330..697544 /locus_tag="SKA53_03564" /note="COG0520 Selenocysteine lyase" /codon_start=1 /transl_table=11 /product="aminotransferase, class V" /db_xref="CDD:10391" /translation="MLDLAWVRAQFPAFSEPGLQGQAFFGNAGGSYACQQVIDRLHRF YTQRKVQPYSAYEASRLGGAEMDEARTRLAAMLGVARHELSFGPSTTQNTYVLAQAVR RWIKPGQKIIVTSQDHEANSGPWRRLAEDGVRVVEWQLDPATGLLNPDDLAQLLGDDT ALVCFPHCSNVVGAINDVAAITQVAKSAGARVCVDGVSYAPHGFADVGALGCDVYLFS AYKTYGPHQGIMVIREDFGFELPNQGHHFNGDVLYKRFTPAGPDHAQIAASAGMADYF DAMSQHHGGGTGASAARLSHDLMRAQEIALLTPLLDYVSAKNSVRLIGPADAKTRAPT VAMALQGNAADVAARLVPFGIMAEGGDFYAQRPLQAMGVDLDKGVLRVSFTHYTSMAE VDQLMAALDQVL" gene 697541..698956 /locus_tag="SKA53_03569" CDS 697541..698956 /locus_tag="SKA53_03569" /note="COG0415 Deoxyribodipyrimidine photolyase" /codon_start=1 /transl_table=11 /product="deoxyribodipyrimidine photolyase" /db_xref="CDD:10289" /translation="MTQTPIIVWVRRDLRLADHPALTAACESGQPVIAVYIHDDQVAS LGGAQKLRLDLALAQFGKTLADRGSRLILRKGPALGVLRDLIRETGAGAVYWSRLYHA TANDRDAAVKSALKADGIVARSFTGHLLFEPWTVATKTGGFYKVYTPMWNAVRGNEVA EPLPCPAKITAPAVWPASDALADWQLRRAMQRGGDILARHCTVGEDAARDRLGAFIAD RVANYVKGRDLPAIKGTSNLSENLTFGEISPRMCWHAGQRALRDGKADAEVFLKELVW REFAYHLAHHTPRILTDNWKEDWDAFPWNTQITPEVAAWQQGRTGIPFVDAAMREMYV TGTMHNRGRMIVASYLTKHLLTHWKVGLDWFADHLIDWDPASNAMGWQWSAGSGPDAT PYFRVFNPVTQLDKFDKDRAYVKRWIAERYRSPQDSALTYFEMIPQSWQMRPDAAYPD PVVTPEQGRTRALDAYGNRGF" gene 699058..700266 /locus_tag="SKA53_03574" CDS 699058..700266 /locus_tag="SKA53_03574" /note="COG2230 Cyclopropane fatty acid synthase and related methyltransferases" /codon_start=1 /transl_table=11 /product="Cyclopropane-fatty-acyl-phospholipid synthase CfaS" /db_xref="CDD:11936" /translation="MILTTTHGQTGLPRYFSNVFDTLKSMKRGRLDIILPDGRHFRAD GAEPGYVAEVHVHNTDVFARTVREGDLGFCESYMDGWWSTPDLMAFMDLMHDDMEHIY DGFPGQFLVRFYERVRFWLQNNSKKQARKNISYHYDLGNEFYGLWLDDTMTYSSAKFV TGQESMEAGQIEKYKSMVDQMGVQPGDHVLEIGCGWGGFAEYAAKERGLRVTGLTISQ AQHDYAVERMQKAGLSDKVTIKMQDYRDEKGIYDGIASIEMFEAVGEKYWPVYFETLH DRLKPGKNATLQIITVEHRRWHVYKRGVDFIQKYIFPGGMLPSPVVLRQEIEKAGLQV AQSIEFGESYSQTLRRWHDTFNARWDQVQALGFDDRFRRMWNFYLTSCAGTFHSGNCD VTQITVTRAS" gene 700347..700787 /locus_tag="SKA53_03579" CDS 700347..700787 /locus_tag="SKA53_03579" /codon_start=1 /transl_table=11 /product="Tellurite resistance protein" /translation="MPTAARLAGAILFGLWGFYHAALAAPFFLEGRPPRSFLPASVII GLYLGWRYVGRRAGNGYGAAIGAGVTAGFAFGFLSLLVIAFSQMIRHSLHNRYQGLSD AILDIFDLMISESSRFTDINLFISLFGGAVLCAWVTEYVGQKYR" gene 700911..701945 /locus_tag="SKA53_03584" CDS 700911..701945 /locus_tag="SKA53_03584" /note="COG0031 Cysteine synthase" /codon_start=1 /transl_table=11 /product="O-acetylserine (Thiol)-lyase, cysteine synthase" /db_xref="CDD:9907" /translation="MMQIRNDFAEAIGNTPLIKLRAASQATGCTILGKAEFLNPGQSV KDRAALYMIKDAIARGDLRPGGTIVEGTAGNTGIGLALLGSSMGFKTVIVIPETQSQE KKDMLRLAGAKLVEVPAAPYSNPNNYVRYSERLAIALRETEPNGVIWANQFDNTANRQ AHVETTAPEIWAQTDGKVDGFICAVGSGGTLAGVALALQPKGVKIGLADPEGSALYNF YEHGALKSEGGSVSEGIGQGRITANLEGLTPDYAYRIPDAEALPLIYDLMQHEGLCMG GSTAINMAGAIRMARDMGPGHVIVTILCDVGSRYQSKIYNPAFMREKGLPVPAWLEEK ADVPSVRAAV" gene 701942..704254 /locus_tag="SKA53_03589" CDS 701942..704254 /locus_tag="SKA53_03589" /note="COG0471 Di- and tricarboxylate transporters" /codon_start=1 /transl_table=11 /product="mechanosensitive ion channel family protein" /db_xref="CDD:12600" /translation="MTARSLVFRLLVCLLWPMAALAQDAAPLPGGPYDDTAVWSALAE RAETLVMRDTSSQFAIMRLRAELAGWRDHFLSQSNVNANRLATVNAQLSALGAMPDSG AEPAQVADRRAALQAQRDALLAPRALAQEAFARANGLISELDMKVLQQQTAQLFQRGP SPLNPALWPAAASATWQVFRTVGAETLAGLQVQSGNRRLLANLPRAALFIGLAVLLVG YTRWWLVQWRARLSHRDTFLLPIWLFLLSLMQILVSLVGLVALAQGLDTLAIFGLRGQ AVIAAIPAAGMTVVLGWWLGRQVFSDGTLPAHLGYGKDTRANARRITLALAWVLAFGA VFEAAAGSVDLAAGVAATMGLPVIGVAGALFWQLGRLIKTPPIASDTAPVSQGRMRIQ VGRFCTIVAVASPALAAVGYSAAGQGILTSSILSLALLGAILVLQRIVHDITLRHASA DEAKGLMALLPVLASLAIYLGSLPVLALIWGARTDDILEIWNRFREGFAIGETRISPT DFLTFAIIFSLGYALTRFIQATLRRTVLPRTRLDLGGQNAIAVGFGYVGILLAALIAI TSAGIDLSSLAIVAGALSVGIGFGLQNIVSNFVSGIILLIERPISEGDWIEVGGQMGY VRAISVRSTRIETFDRTDVIVPNADLVSGQVTNWTRGNLVGRVIVPVGVAYGTDTAVV EKILSEIAQAHPMVIVTPPPAVLFIGFGASSLDFEIRAILRDVNFVLRVKSEMNHEIA RRFAAEGIEIPFPQQDLWLRNPETLKGDPA" gene 704251..704967 /locus_tag="SKA53_03594" CDS 704251..704967 /locus_tag="SKA53_03594" /note="COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12224" /translation="MTTPLFRDDAYARQAEGRVLDITSEGGIVLDACLFYPTAGGQPG DSGSLSWQGTTLDIATAVKGEGDSIILLPAEPAPLPSVGQSLLQKLNWDRRYRHMRVH TALHLLSVVIPLPVSGGAIATDKGRLDFDMPDAPEDKEALEDALNRLIACNMAVTEEW ITEADLDAQPDLVKTMSVQPPRGSGRIRLVRIGIGAETADLQPCGGTHVANTSEIGPV RIGKIEKKGRQNRRVYLHLD" gene 704971..705597 /locus_tag="SKA53_03599" CDS 704971..705597 /locus_tag="SKA53_03599" /codon_start=1 /transl_table=11 /product="probable protease precursor" /db_xref="CDD:2624" /translation="MRVILVVLCLLGAQSAIAQNVVHCSPAQDVIVRAALDHAKSLAI TAASAVGDTPDYARWFGTYSDRNAETARATLKSVVRAIRAGGVSLQCDTLRDQGCGND EYAWVYADKPYHIYLCPSFFDMPVLASLRPGTRASDNGTREGTLIHELSHFRSAGGTE DHCYTRRDCMGMALQEPDLAIENADSYQYFTEDVIYYASQPVIGKASP" gene complement(705594..706748) /locus_tag="SKA53_03604" CDS complement(705594..706748) /locus_tag="SKA53_03604" /note="COG0628 Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10498" /translation="MLHDPPKPTSPEKRIDTARLQTGALMIIAFAVVLFLLVQARFIL ISLATAIILFSLTSDVINFIARQRIGPLRIPNAIASIAAMVLIATALLILTSVLLAQV NTVLVTTLAYTERAPSAIASMFGWLSEDNQAAIFNAVRSIDATSYLRSAAGQASGITQ ATVLIILFVGFLFAERIWFDTKLESLIGDKAQALRVRKIIQSIIHRVNYYLLVKTVIS GITGAMVYALALAFQLELATALGVITFVLNFIPNIGSILATGLIALVTHVQFGAPNTT LAIFVIATGIQFLNGNVIDPMLMGRALRLSSFGIILSLAFWGAVWGVPGMFLSVPIMV MLLVVCSHVPHLRPFAILLSREGLPDTEQMLNETAKRDVFQKPPKPSGGI" gene 706875..706961 /locus_tag="SKA53_t03936" tRNA 706875..706961 /locus_tag="SKA53_t03936" /product="tRNA-Ser" gene complement(707527..707955) /locus_tag="SKA53_03609" CDS complement(707527..707955) /locus_tag="SKA53_03609" /note="COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA" /codon_start=1 /transl_table=11 /product="SEC-C motif" /db_xref="CDD:12652" /translation="MSLSLWIEPIYEIDTNSDEIRWEPWVDGYTRALGLRPDAWEKLL DRADEETRSTMIFLLALQDIYTGKSKFSEEEIDEIDLEAPDLIPNCVATILHQSRPEL AGTVAANLPGKPHKAEPRPGRNDPCSCGSDRKYKQCCGRN" gene complement(708216..709967) /locus_tag="SKA53_03614" CDS complement(708216..709967) /locus_tag="SKA53_03614" /note="COG0659 Sulfate permease and related transporters (MFS superfamily)" /codon_start=1 /transl_table=11 /product="probable high affinity sulfate transporter (SulP)" /db_xref="CDD:10529" /translation="MKRLSLFPAGRWLRGVSSSAIRADLFAGLTGAAIVLPQGVAFAT IAGLPPEFGLYTAMVTAIVAALFGSSMVMVSGPTTAISALVFVTLQGIAPAGSARYIE LALLLTLLVGLFQILAGVARLGGLVSFVSHSVIVAFTAAAALLIAVSQLAGMLGVSIA GGGNVIERVHRVAAMAGDVNLFAVMIALVTLVTVAICQAFAPRLPGFLIALGVGAGVA VATDAANRGVEMLGAIPAALPSLSSPQIQWSDIALLAPGAAAVALVGLLEAISIGRTF AIRRKEPFAPNQEMIAQGLSNAVGSFFSCYAGSGSFTRSGVNEQSGARTPLAAIFSSL FLAAILLALGSYITVIPKPAMAGLIIYVAWRLIDKKEILHIVQTSRPETLILGLTLGA GLLLELDFAIYVGVIASFSVFIYESAHPSLRVSAPVISASGRRKFRNADLHGVPECLQ LVSVRLDGPLYFGSVEHIEAQWQALRAKRPKQIHVIFYLKGVGKIDLSGADFLVHAIR EIRAQGGTFRIVALFPPLLECLRRFHVLEELDTDCLYISKGDAIGATVRHLDQSICAG CIKRVFTECAEQPHHQT" gene complement(709969..711633) /locus_tag="SKA53_03619" CDS complement(709969..711633) /locus_tag="SKA53_03619" /note="COG3119 Arylsulfatase A and related enzymes" /codon_start=1 /transl_table=11 /product="sulfatase family protein" /db_xref="CDD:12458" /translation="MGKPKNILFIMFDQLRWDYLSCAGHPHLQTPHIDALAAEGVRFT RAYVQSPVCGASRMSFYTGRYVHSHGATWNRVPLKVGERTIGDHLRDAGMDCWLVGKT HMKADDEGMAWLGIDRESVIGARVEQCGFDVWERDDGMRPEGPDGLYDEKYGAAVYND WLRENGYHSANPWHDFANSGRKDDDPQEMASGWFLKNARKAAAIREDDSETPYMTSRA IAFMQQAGDTPWCLHLSYIKPHWPYIAPAPYNDMYGPEHVLAVARHKRELTEAHPVFK AFMDGRIGKAFSRDEVREAVIPAYMGLIKQCDDQMGRLFAWLRDTGRWDDTLIVLTSD HGDYLGDHWMGEKDLFHEPSVKVPLIIRDPSPQADVTRGSTCDALVEAIDLAPTFLEV AGGAERPHILEGRSLMPWLHGQTPDWRDYVVSEYDYSMNPAVSKLAKDPSSARLFMIA DARWKFMHAEGMRPQLFDLQNDPLEYVDLGESAAHRDIIAQMNDRLAIWARRLSQRTT RTDAQIITERGRSPMRGITLGVYDEADLPQEMTQFYRGRPRPDQPS" gene complement(711633..713819) /locus_tag="SKA53_03624" CDS complement(711633..713819) /locus_tag="SKA53_03624" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="cytochrome P450" /db_xref="CDD:11832" /translation="MNKIDQATKAIPVSAIDFYSDASISDPYPVYEELRALGPVVYLE KHDLYALPNYREVSEVLRQPLRYSNARGVSPLQKVNDILIGSTLNSDPPAHDRTRAIT SEPLLPGALKEVEGRIQNAADGLVDTLCQRREFDAIADFARFLPVTIVAELVGLPPVV DSAQMLKWASATFNLFGADNARTKEAFEDLKDLRDFLIEYGRPEKLMDGGWAKRIFEV GPERGISFETCAQLMRDYINPSLDTTISVSGQLIRLFAENPDQWQKLRDTPELIANAI EESMRIAAPVRGWTRYVAEDSKLAGHLLPQGCRVLVMFASANRDPNKYPDPARFDITR DVHDHVGFGQGVHMCMGMHLARLEMQSLVRALRRRVARFELTAAPQIALNNSIRGYAT MPVRVHLGDQVLHDADRIDAASPWLDVTIATRTAAATDIISLELHSPDGSPLPAYDAG AHVDVYVKSGLIRQYSLTGDPADRMKYRLGILLDPNSRGGSAAIHAKFQQGAKIRIGR PRNSFPLIADAGHTILFAGGIGITPMLGMAYALERSGASWEMHYCGRTLDRLAFRNEL ARFGGKVHLHTDDGTKDQQLDINAVLSNAAHDHHLYVCGPNGFMDFIVRSADAHGWTK DTIHLEHFGAEVNTDGAPFTVVAKKSGKTFVVQPGETIAHKLAENSIAVQVSCQSGVC GTCLTRVLEGMPDHRDMVQTDLEKASNAQITVCCSRSKTKTLVLDV" gene complement(713816..714628) /locus_tag="SKA53_03629" CDS complement(713816..714628) /locus_tag="SKA53_03629" /EC_number="1.1.1.50" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-alpha-hydroxysteroid dehydrogenase" /db_xref="CDD:10756" /translation="MQQLTYAVTGVASGIGAELARILTAQGHRVIGFDIQHTVENIDR FIPLDLNDADSIQQAAQAISEPLDGLCNNAGLPPRDGLEETILQVNFLGTRALTYAVL PLLRPDASIINMASRAGHGWRDGVEQVKRLGRLKRRDQLAQFIVDEKLDATRCYNLTK EAVILWTLAEAETIVNRGFRINSLSPGGIATGILGDFQRAFGAKMARNVARAGRPGRP DEIAKIAAFLLSPASNWIKGTDIAIDGGMGAFNQADLMDLHGLRLPEKEMAE" gene 714686..715621 /locus_tag="SKA53_03634" CDS 714686..715621 /locus_tag="SKA53_03634" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="LysR-family transcriptional regulator" /db_xref="CDD:10453" /translation="MKKRYVFDLLITMKVQHIQILVAIAEHGSLRGAAKALGKSQPAM TQALRQAEDDLGVSIFARTSRGVELTEVGERVLVRARTITSEINRLDEEVTQLRGEQA GAVHVCVSPLAAVRIMPRALTLFRKTHPKIDVRLTSGLFPGALKPLREGRTDIVIGPA PPAGMLREIAIEHLVDTPIQVITAANSPLLSARSLGDLAEAQWIMIGAPTGPGDIFRQ PFLDHGFAPPHATTTSESYFGALALVESLGAVCTFPQLLLDDVQKTWRIAPIPIQETI TPLKISLMTRAGHPLTPAADALANCIRRRASSILR" gene 715739..716773 /locus_tag="SKA53_03639" CDS 715739..716773 /locus_tag="SKA53_03639" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding protein" /db_xref="CDD:11350" /translation="MITRKSLFASLLAASALAGPAASQTELTFNIFFPQTHFAWPVFQ AWAQDISAATNGQVSIAFPPQSVAPPPGIVDAVRNGVADGGFIFNGFIGQQYPGTMLT QMPFIDLGNSEAMSVAFWETYQEHFLGVEDVRGVKMLSGFHLGPTYLCSTTDAPITTI ADLQARRVWALPGTIADTLAAMDLAITASPAVQLQELTSRNTVDAHLGVTMETIVAFG AAPYTKSCVEMAPALQSASFSIFFNQRSWDRLSDEHRDAITQLSGSALAARLGAATDV ADDEARTQLEAMGVSFAPIDANLLAEMQAASSSVALSWSEALNAAYDLDGMELIAKTR DRVAQVSANE" gene 716885..717316 /locus_tag="SKA53_03644" CDS 716885..717316 /locus_tag="SKA53_03644" /note="COG3090 TRAP-type C4-dicarboxylate transport system, small permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12429" /translation="MTVLTCAEVVMRYAFHSPIFGSAEMIQMLLGILVFSGMFAVTRD RGHVNVSLFEPFLLRHFRRLYRSIFDVMTLVGVVAIFGILGWRTWDLTHYPETSVVLR LEMIWIIGAMAALAGLAIVAALAAMADERRNTPPHSPQDYE" gene 717328..718623 /locus_tag="SKA53_03649" CDS 717328..718623 /locus_tag="SKA53_03649" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctM subunit" /db_xref="CDD:11306" /translation="MELALLGFAILLFLAFIGVPLAFATLAVGFFGLMYLRGFDAALS VSSQWIVDTSINYHLSIIPLFVLMGAFIHRSGISKDLFDASYAWFGRFRGGLALSGIL SCAGFAAVCGSSLATAATMTRVAVPPMRAFKYNDGFSAGTIAAGGTLGIMIPPSVPLA IYGIVAGQDIGLLFIAGILPGILLICLFMLAAYIVTAIRPDFGPAGKAMGLRETLRAS TATWPVIILFGIVLGGIYTGIFTPTEAAGVGCAGAFLFGLARGHFMDRQSLWAVFSET VTTTAMIFAIVFSALVLAQFVNLTGMPYDLQALILGWELGPIGLVLMICGICVLLGMV FESIGILLLIIPVFLPSLDALGVDLIWFGILVIIVIELGLISPPIGMNVFTVKSVAPE IPLGSIFLGVSPYIVAMVIGGVLIILFPQIATLLPQAMR" gene 718637..720112 /locus_tag="SKA53_03654" CDS 718637..720112 /locus_tag="SKA53_03654" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase family protein" /db_xref="CDD:10741" /translation="MTDIVETQLYINGAPCAASDRGFYDIFNPARPAELVGRAAAGTP QDVDRAVKAAHAAFPAWAALSYAERADILRKVAAAITQDMAEVETRARLFTREHGKIL RETHLEISRLGERFIQSANYAARLAEDEIIRAAPNDTIITRQPRGVAALVVPWNWPLA ILGAKLPQALMAGNTVVVKPSANSALAPTMTLHKIAALLPPGVVNILTGSASRIGDAI IGHPLVRYVNFTGSVDVGRHVMKVAAENITPVTLELGGNDAGLILHDADLSGDAFDRL YRAAFMSTGQICYALKRLYVHRSRFEQVVAGLSAVLDAQIVGDGLLPETTMGPMNNAK QLKVVTDMIAEARAKGQSVVELGQIADPDLYAQGHFQRPTLVIDADPRLSVVRHEQFG PVLPILPFDDEQTAINMANDDQFGLASSVWSADVDRAIKLARGIEAGYSFINAHGPSA QDGNGPFGGFKQSGIGRNFGYEGVIQFQGYHSIAGAPGTLV" gene 720244..721299 /locus_tag="SKA53_03659" CDS 720244..721299 /locus_tag="SKA53_03659" /EC_number="5.5.1.2" /note="COG0015 Adenylosuccinate lyase" /codon_start=1 /transl_table=11 /product="3-carboxy-cis,cis-muconate cycloisomerase" /db_xref="CDD:9891" /translation="MTNAFTTSGLFGGLLCDPAIAQEFDAPAFTARMLAFEAAWTQAL GTCGVVPADDAETALTAIKAFSNHTLGQGSDRDGLPVPDLVAALKSDLSSSAARAVHT GATSQDVIDTAMVLTCLAVMDRLTDRLHRVIAALESVLARFGDAPLTARTRMQAALPA TIALRVAAWRRPLADHLARAVDVRAQLAFVQIGGPIGTREMPQIHVAECAGRVAATLG LSLGPVWHTDRSRIIALGHWLALVAGSLGKIGQDVALMAQQGVDEISLSGGGVSSAMA HKQNPIGAEMMVALARYVAGQQGILGQAMIHEQERSGAAWALEWLTLPAMAEATGATL NHAESLIASIERIGIPD" gene complement(721324..721950) /locus_tag="SKA53_03664" CDS complement(721324..721950) /locus_tag="SKA53_03664" /note="COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit" /codon_start=1 /transl_table=11 /product="3-oxoadipate CoA-transferase, beta subunit" /db_xref="CDD:11765" /translation="MPWDRNQMAARAAKELQDGWYVNLGIGIPTLVSNYIPEGIEVTL QSENGMLGMGPFPIAGTEDADLINAGKQTITELPQTAYFDSATSFGMIRGGKIAMAIL GAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVVVVMDHTNKHGESKVLKSCTL PLTGQCVVDRIITNLGVLDVVEGGLRIVETAEGVTEEELRAATEGNIV" gene complement(721950..722183) /locus_tag="SKA53_03669" CDS complement(721950..722183) /locus_tag="SKA53_03669" /note="COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit" /codon_start=1 /transl_table=11 /product="3-ketoacid CoA transferase alpha subunit" /db_xref="CDD:11499" /translation="MKAWKADETGNLVFRKTARNFNPPAAMCGKVCVVEVEEIVPTGS LDPDSIHLPGIYVHRIVQGEHEKRIEQRTVRVA" gene complement(722180..722644) /locus_tag="SKA53_03674" CDS complement(722180..722644) /locus_tag="SKA53_03674" /note="COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit" /codon_start=1 /transl_table=11 /product="3-oxoadipate CoA-succinyl transferase, alpha subunit" /db_xref="CDD:11499" /translation="MKKIYPNAAAALDGLLHDGMFIAAGGFGLCGIPELLLSAIRDAG TRDLTFASNNAGVDDFGIGILLQTRQVKKMISSYVGENAEFMRQYLSGELELEFNPQG TLAERMRAAAAVSLVSIQRQALVPSSPRAKNTRISTARPIFWRKVSSPICRS" gene complement(722641..723477) /locus_tag="SKA53_03679" CDS complement(722641..723477) /locus_tag="SKA53_03679" /note="COG3246 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24077" /translation="MTNPCIICVAITGSLPTKANNPAVPITISEQIESTQEAFEAGAT IAHCHVRDDDGKPTSDPERFARLKEGIEKHCPGMIVQLSTGGRSGSGRERGGMLPLSP DMASLSVGSNNFPTRVYENSPDLVDWLASEMIAHDVKPEIEAFDLGHIVQATRMAADG RLKTPLYVQFVMGVKNSMPADEVIFDFYIETLKRLAPDAQWCAAGIGPAQLTINEWAI AKGGHTRTGLEDNVRLDRNTLAPSNAALVRRAVDLCEKYERPVATWQQARDILGLKKV AA" gene complement(723485..724102) /locus_tag="SKA53_03684" CDS complement(723485..724102) /locus_tag="SKA53_03684" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN" /db_xref="CDD:12813" /translation="MVQKLHDYLRESPSQTAGPYVHIGCTPNFTGIDIYGGDLGTSMK TGPVQGTEITIKGTVFDGMGAPLRDAMIEIWQPDAAGLFPSANETRGTPDPNFTGWGR SPGDMETGEFTFDTVKPGAVPYPDGRMQAPHITAWIVARGINIGLHTRIYFDDEQVAN AADPVLSRIEHQNRVPTLLAKKEAAGLYRFDIHLQGPAETIFFDI" gene complement(724105..724851) /locus_tag="SKA53_03689" CDS complement(724105..724851) /locus_tag="SKA53_03689" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="protocatechuate 3,4-dioxygenase beta chain" /db_xref="CDD:12813" /translation="MSLVNLPPKPGGFIPRDRTWQPDGLTPTYKTSVRRSPQAPLLSF PSTLSEETSPVFGHHLIGPLDNDLILNYAQPGQSAIGPRIIVHGRVLDELGRGVAGAL VEFWQANAGGRYRHKKESYQAALDPNFGGCGRTITGADGSYEFRTIQPGPYPWPNGMN DWRPAHIHFSLFGHGFAQRLITQMYFEGDPLIKRCPIVGVLKSQEAVDALTAPLDMHQ SVPMDCLAYKFDMVLRGQRQTYFENRKEGL" gene complement(724848..725228) /locus_tag="SKA53_03694" CDS complement(724848..725228) /locus_tag="SKA53_03694" /note="COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit" /codon_start=1 /transl_table=11 /product="4-carboxymuconolactone decarboxylase" /db_xref="CDD:10469" /translation="MPDRFAQGMATRRYVLGDAHVDHAEATKSSFDTPFQTMITEGAW GTLWSDDTISKRERSMLTLSLLAATGNFEEIPMHIRATANTGASPQDVLQAFMHVAIY AGVPKANHAIKLAKQTYKEMGVEL" gene complement(725221..726009) /locus_tag="SKA53_03699" CDS complement(725221..726009) /locus_tag="SKA53_03699" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="3-oxoadipate enol-lactone hydrolase" /db_xref="CDD:10466" /translation="MRVVDANGVALHVREDGDPDGTPVLFANSLGTDLRLWDALIPLL PQGLRLIRYDNRGHGLSGCPAGPYTMDNLTTDAAALIVAMDLGPVIFVGLSIGGMIGQ NLAATHSDLVRALVLSNTAAKMGEPETWADRIAAINANGIAAMEAAILDRWFGPAFRA NPRAALWGAMLSRTPQEGYIGCCAAIAATDLTQRTRRLSLPTLAIGGSHDGASPPDQV AATAALINGAQYHIIDGAGHLPCVENPAAYAAILNPFLKEHADA" gene complement(726009..727178) /locus_tag="SKA53_03704" CDS complement(726009..727178) /locus_tag="SKA53_03704" /EC_number="1.14.13.2" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="4-hydroxybenzoate 3-monooxygenase" /db_xref="CDD:10524" /translation="MKTQVAIIGGGPSGLLLAQLLHTRGIDSVVLERKTKDYVLSRIR AGVLEQGLIKLMQEAGCATRLHAEGIPHDGTLISYGDEMFRIDFTEHTGTPVMVYGQT EVTRDLYEAREKTGGKIEFNVEDVVIHGADTDTPHVYYTVDGTAHRLDCDFVAGCDGF HGVSRQTIPLDVRKEYEKIYPFGWLGILSETPPVNHELIYANSPRGFALCSMRNENLS RYYIQCSLSDKPEDWTDEAFWQELKRRIPADQAANLVTGPSIEKSIAPLRSFVTEPMR WGRLFLCGDAAHIVPPTGAKGLNTAASDVHYLYNGLRDFYENNSTEGIDTYSQKALAR VWKAERFSWWFSSLMHTYPDQSEFDLKMQVAEIEFLRSNKAAQKSMAENYIGLPY" gene 727267..728193 /locus_tag="SKA53_03709" CDS 727267..728193 /locus_tag="SKA53_03709" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="pca operon transcriptional activator PcaQ" /db_xref="CDD:10453" /translation="MNMDRRIKFRHLDAFSAIARARSFKIAAELLNLTQPAISKTLKE LEDILGVVVLERSRSGVALTPQGEVFLQFAEQSTAALRHGLRSIQGDDSAGGQLKLGA LPSVASSILPAAVLEFAAKSPTTLVEIHEGPHLDLTTRLRSGGLDLVVGRLGKPDTMV GLTFQQLYSEKVVVVASPQSRAIDIRNPAELAAFRVLYPPKDSAIRPLVARLLIAQGV PLFGNRIETASPAFARAVILADPDTVWIISKGVVADDIAQGRLKALEIDLASTQGAVG IMSRAEEVPSVATRTFAKLLNRLCKDGPSGNG" gene 728186..729658 /locus_tag="SKA53_03714" CDS 728186..729658 /locus_tag="SKA53_03714" /note="COG3947 Response regulator containing CheY-like receiver and SARP domains" /codon_start=1 /transl_table=11 /product="possible response regulator" /db_xref="CDD:12953" /translation="MDDRSEQIDTAENNAGQSCALNISVIYDDADGGFLTDALAQITA ASGALVVTNAAQFLTDLQGQARMDFTQAGLDHVPIKLADVSSRLQDAAKRQAARCIIV DMRWGAGTVAAAANFERWGGLCDKLVADTQVSVISVYARSLMIEDQLMAAVRGHSHFL APSGLYENPFWLPPAYQNGATISQQIGFVLGRLVPDYAGIVDQDDGEASGANPQWITV PRRLRPRVGRDDIWKIRCFGRLRIYLSDGSQIKWDIPGSAPKKTKTLFAYLLQRGEKG APTDLLAELLWYDEPDEIKKRKRLHHAITMLRKTLGRSDYVRRNGDYYTLVPPDGTWI DLATFEQLCNRSKVLAKTGKPDEAITLLDAADRLYSGELFEDLPSAYFENEIENWVLP KRTWFKDMALKVLRDKAAILRQQGQFRDALQSCQKALRMDPVCAIAHAEAMRIFHAQK RADAVLRQYRQFLTAMDAMELVPETDDLEVLKSKLMNSLS" gene 729745..730983 /locus_tag="SKA53_03719" CDS 729745..730983 /locus_tag="SKA53_03719" /note="COG2124 Cytochrome P450" /codon_start=1 /transl_table=11 /product="CYTOCHROME P450" /db_xref="CDD:11832" /translation="MRVQAQYQTEDYNIFDLGAPHPKWKQLREQKPVFHDPESGYWII TRHADIKAVFDDWKTFSSENAQAPMRPMCDAGKQIMKDGGFTVYSGLSARVPPDHTRI RKLAQSAFGPRRFKAIQPQIEAIIDRHLTKIAAAGECDFFRDVAYDVPALVLFALMGI PDADVPKVKDWAASRALLTWGNLSDEDQLPLAHKMVAYWSYCRALVAARKETPGDDFP TDMVRTQAEGGDITDEEIAGLMYSVLFAGHETTTTLMSNAVITLMSNRGAWNAICADP GLIPAATEELLRFEPSIVSWRRKAKMGAKIGGIAIPEGADILLVMGSGNRDAAAFENA EAFDIERHNSRNHLSFGYGIHFCIGFQLAKMELGIMLRELTARFPNMTLKPDQQIDYL HNISFRVPNQVMVDLGLEKT" gene 730983..732044 /locus_tag="SKA53_03724" CDS 730983..732044 /locus_tag="SKA53_03724" /note="COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10444" /translation="MTEFTLPFDKIGIKDHARVGGKCASLGEMTQAGVAVPTGFAVTT DAYLAMLDHTGLRREIEAQLASTNLNDVLSLDRSAQAIQIRFRSHKLPAAVEAAIRAD YSAMGDDLPVAVRSSATAEDLPDASFAGQQDTYLWVVGADAVIEHVRDCWASLFTARA MKYRADHALGQIDVLMSVAVQKMVNAQTAGVAMTIDPLTGDRTRIVIDASYGLGELVV SGIVTPDNFTVEKVLMEIIDRKISDKHVELVPDVAAATTVEREVDEGRRNRQCLTDAQ VIAVAQLAKALERRNKCPQDVEWAFDADLPEGENLVALQSRPETVWSQKPAAPATTGF AMGMMGMVGALNNPVGSKK" gene 732091..733884 /locus_tag="SKA53_03729" CDS 732091..733884 /locus_tag="SKA53_03729" /note="COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:16716" /translation="MFPSAYDLKAPVGAEGWEDLYPYYLKFQPALREKEDQKFWFCDS QHWPNPFKPFDTMTVEFAVKCLGQYNTRHYLVPPANGVDYRIHNGYVYMSPIGVPAED IEARIPQFMERAGHYFQNWPTLLENWHKKVKANIDEMESISFEKLPAVVPLEWIKDGV GLDNTTALTENYDRMIQLIYRTWQYHFEFLNLGYAAYLDFFGFMKGQFPTIPDQAIAK MVQGHNSDLFRPDDEIKKLARLAVELGIADALKTGSVDAALAAVGAQENGSKWIAAWE AAKDPWFNYTTGNGFYSTDKYWNEHLEIPLGYLRDYIVRVQAGETIERPMDALHAERD RIASEYEEMMSPEAAEAFQGKLGLARTVYPYVEDHNFYIEHWSMGVFWKKMRSLSKLL HEEGFWPTEDGMFYLDRNEVRDVIFDYGNAWATGGDWAGPTYWPDEIERRKRIIDALA TQAPQPALNNPPELITEPFTIMLWGITSESIKNWIGGDEDSDDLVGMAASPGAVEGIA RVIRSPDQLDEIQQGEILVAPVTAPSWAPVFGKIQATVTDIGGMMSHAAIVCREYGLP AVTGTGSASSRIKTGDKIRVDGNTGKVTILS" gene 733939..734544 /locus_tag="SKA53_03734" CDS 733939..734544 /locus_tag="SKA53_03734" /note="COG1418 Predicted HD superfamily hydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25853" /translation="MLDTTQDFARYDPVWRKAEPYMRARKNDIHIPLSFAWAVRLLND YSDADRDVCLLAILLHDIGWYAIDMDDIIEKGFSGPNMLQSDVRYLHEAESVKIGTQV LQATGWNADIISQVCEIIDGHDTRFYPRHLNDRIVRDADKLWRFDVTGIAVACDWFKL TPHAYADRLEDQKDKLETEVGREYAAQTLAASRKTLMLHVI" gene 734555..735994 /locus_tag="SKA53_03739" CDS 734555..735994 /locus_tag="SKA53_03739" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="succinate-semialdehyde dehydrogenase" /db_xref="CDD:10741" /translation="MDMFIDGAWRPATAGARQDVTAPATGEVFDTVPTGDATDADIAI QAAARAFESWKKVPMVERARIQKACAQAMRDNAETVGAILNKELGRPLHACVAEISRS ADLLDVYAEEGLRLTATMSLASGAGEKTIVTRDPLGVVVAITPFNYPVTLLIFKLGAA VIAGCTMVAKPAEDTPLSTLMLAEIFHKAGLPAGVFNVVTGRGRGIGSAMIEHPIPRK IAFTGGTAAGKAIAAAATGTMKRVTLELGGQSAAIVCADADLETATTAIVRHGFANSG QFCYRVNRVYVERPVYEDFLARLTEKAGKLTLAPAGGDGDLGPLVNEKIYSNSEVQVA DALAKGARIVLGGDRKTGQGFDAGFYFPPTIIADATHNMLVLTEETFGPVIGICAFDS VSEALRLANDNRYGLAGFVFAGDLAKGLTLCEGMEAGSVWLNDIHRSSHYVPFGGMKE SGVGREKGRYGVESYLEYKTMYLSYEVPA" gene 735991..736602 /locus_tag="SKA53_03744" CDS 735991..736602 /locus_tag="SKA53_03744" /note="COG1418 Predicted HD superfamily hydrolase" /codon_start=1 /transl_table=11 /product="metal dependent phosphohydrolase" /db_xref="CDD:25853" /translation="MSADTLLSRDILLWHAAKAFLDVRSNDVHTLISYRLARALLAEH PGVDEAIVLPAILLHDVGWKMIDPALLSDAVGPNATRPELVRDHEIYGVEIAGDILRR HQPEDVDSDAVLAIIDRHDTLKEASSPEDAVVKDADKAWRFSPHGVATISGWFDYEAD ETLAMLEDFVLPTMLTDAGRVMARAMLAAGRAQAQADYYFKGN" gene 736604..737365 /locus_tag="SKA53_03749" CDS 736604..737365 /locus_tag="SKA53_03749" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="PROBABLE SHORT-CHAIN DEHYDROGENASE, secreted" /db_xref="CDD:25396" /translation="MSQLGLKDKRVLVTGAAGGLGRAFAEGFAAAGARVIVADLNELG AQETVRAIKAAGGQAHAAKVDVTNAQSCAALADFAQKTLGGLDVLINNAAIYAGLERK TFTDIDEAVWDKVMAVNVKGVWQMTRAVTPLMKTAGAGAIVNVASATVFSGSPQWMHY VASKGAVIAMTRALARELGDDNIRANVIAPGFTLTEASLDLIADAENYGVTRGALKRS ADAKDMVGTALYLASDLAGFVTGQTLIVDGGRQFN" gene 737376..737690 /locus_tag="SKA53_03754" CDS 737376..737690 /locus_tag="SKA53_03754" /note="COG0633 Ferredoxin" /codon_start=1 /transl_table=11 /product="ferredoxin" /db_xref="CDD:10503" /translation="MTRLVFIEPSGNRCEIDAADGESVMQAATAKGIAGIDAECGGSC MCATCHCLVVDAVNPLPDMQSAEADTLEFTAHQMHDNSRLTCQLTVTPTMDGTVFQVI GR" gene 737694..738923 /locus_tag="SKA53_03759" CDS 737694..738923 /locus_tag="SKA53_03759" /note="COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="rubredoxin reductase" /db_xref="CDD:10968" /translation="MSGIVIIGAGHAGVQLAASLRENGYRDTIRLLSGDPDFPYHKPP LSKSFMATEDAALQPLRGEAFYAQNAIDLRLGVDVARIDRNGKSVICADGATIDYDKL VLATGTRARNITVPGADLPQVFALRTATDARRMRDALPAMRHVVVIGGGFIGLEAAAM LSARGVQVDVIELAPRLLGRATSGAVASAIADHLTSTGVRLHLNQSISAIVAQDGAVL GVQLGDTTLPADHVLVGVGAIAMDNLAQEAGLSTDSGIVVDGFLATDDPDIFAIGDSV SFPQIHLGRQARLESVQNATDQARALARTLTGQPDRYTALPWFWSDIGTLKLQIAGLS EQPDQFIQTHDTHGMLKSVYHLKRGELIACETLNSAGEHMLSRRMIAEGLTPGLAELA TGDLTQIKLAYQRLSDV" gene complement(739402..739833) /locus_tag="SKA53_03764" CDS complement(739402..739833) /locus_tag="SKA53_03764" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIVTAKDLARTAGFESVARFANEMHRHSLPFGNGTRVGNTKRYD TVALAKAVIISRLRAFKIPVAQHKALIKVIDDAALASALDQFKAGKCECVIVGIPSWG ELDDYSGMFVTRDAALDALAAADFILVDVGEAIQAHLNGVI" gene complement(740094..740369) /locus_tag="SKA53_03769" CDS complement(740094..740369) /locus_tag="SKA53_03769" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDTPAARRHIPSNETAMKYTTDTRDRRGVERAVEGILDKWATG DTAAQTSIYVTKLRLTAEDLRQETQAIEQLADQEAQLAGPVGEHTGG" gene complement(740366..743236) /locus_tag="SKA53_03774" CDS complement(740366..743236) /locus_tag="SKA53_03774" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNTATLSIITAIKPTRLSKGFSLSAGGDLLKQAGGNLSQGMVET RELSTLADLGAILQSLTPAQALVYGVPNNAATKVMTRKAFADSGKPQGTTTRTNDAFV WPQGAGVMMLDYDPAANGDPLDRDSLVHAIGKAAPGLVDAGLLWWPSASSCIWQGEKE LRGVKGQRLYMLVQDAADIPRAGQVLVDRLWLAGYGHIEISRSGAMLERTLVDASVWQ QSRLDFAGGAACGAGLDQRRGDPFLINAEALPTDTRDAFYDLTAQERDQLNAIKSEAK SAAKPDAEEVKEVWVAERVKEITALTDQSDKEAIERAEKNARRALETSNLAGDFVVQV ERDGRLISVTVGDLLNNRNKYHGCITLDPIEPDYDGGRTVGRLYLMQACPSLHSFAHG GKTYRLQRAPARVELVKGHTSEAATATIELMRRDPVTYDFGGQLALAEDGRLHALCEA GLAHHLGNTTQFWKYVQQGDIVVPVDIDPPPGLLKQVIAQGERRKLKPIEGVITAPTI RRDGSALTSPGYDAETRLLFDPLGDDVPDVPINPTLDDASRAVKTLLYPFATFPFVDA SARGALLAAILTAVTRPVLPTAPAIAFDAPIQGSGKTLLANCVGALIEGRAPDVWPHT QGRDDEETRKRLFTALRTGGKALIWDNVIGIFDSASMAAFITADAMIDRVLGKSEAIR IPNRALLILTGNNLSLAGDLPRRVIICRIDPETDQPFARQFDMDPLQWVLDHRVEMVA PACVLIRARFTHAQKRAPGRLASFEAWDDLVRQTVCWADSVLRPHEFGDPMDLVREAQ AADPEADALFALLDALRDQFDTAEFTAKEVQSVAKGIMIDTPIETALLDLAGDRALKS VRSLGRILKFREGRIVHGLRLTGRADASSGSRVYRVQAGEASTEQQNGFNGYNGFLPS HTEKAETPSVYREEETNPLNPLNPSNPLASPLDDIFDPDSWL" gene complement(743620..743994) /locus_tag="SKA53_03779" CDS complement(743620..743994) /locus_tag="SKA53_03779" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDEELFRHLWTSYLSTIDGRQTNGDIELLAEAAERMEWPGAPE MGSTIASVLRAQVVKDKTGKASKHYKLVRDRQIFDLAQIHADQGMTQKDSHECIALIF NIEPGAVTKAVTKIKKERGLEK" gene complement(743991..745244) /locus_tag="SKA53_03784" CDS complement(743991..745244) /locus_tag="SKA53_03784" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="putative phage integrase" /db_xref="CDD:27722" /translation="MMTLATDLAIRRWKPTKDGEAIGTGGRTGLYVRGWKTGTKAFYF RAKTWIKLGDYPDTTLALARELSTVAKRLAREGFGVEALSRGFANATTATELEAVVRG EVLAGFADLGATSAPTYHELWTEWHEGRKHKLQDGPSRRRPEAIHLHHIKSVLGDRPI TEIRRREIFNLLEPLFREKPITAGHALGHIQAVFDRATNKELIEADPTPRKTAFADAV ARREVKHHGTLAHDRLPELWQWLGTTDASDTAKLAILTAMTTGHRIGVIVNAEWAHID DASGVWTVPARTDRTTQGRMKSGRKYALRLPEPLLGRLQSLRKGPDQQHVFESPTTTG PISPNAIRKTLKRFDADLTAHGFRNAIKGWCRSAVPPVPDHIADAFCDHSLRGLDAAY RRGDTSTERADLAARLYDFVTGADA" gene complement(745865..748042) /locus_tag="SKA53_03789" CDS complement(745865..748042) /locus_tag="SKA53_03789" /note="COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /codon_start=1 /transl_table=11 /product="isoquinoline 1-oxidoreductase, beta subunit, putative" /db_xref="CDD:11243" /translation="MAFGAYFVTRQTPNPLLEGLAEGEAALTPFVKITPQGITLIVPR ADVGQGIASTQAMLIAEELDIDPATATLDPGQPHQAYFNGTVAAESLPFPAWENGFVA STVRELMGNVARLTSSQFTGGSSSVADLHETLRMAGATARETLKAAAAFRTGVPRADL RTENGQVILPDGTGIPYTDLAAQAAAIKPVTDVTLRPASEWTRLGKPYQRLDIVAKST GTQDFGIDVVLPGMLHATVRANPGRGGGMAGYNADAALTMQGVRSVVEVNEGLAVIAD NTWFAFQAAQALEVDWLPPEYPASSAEMWQALINARTDAFRNSRLRDDGDVEAALADA TVIEAEYRSPFLAHAALEPLSATVLVEAERVQIWTATQIPAVVRDAAVELTGVDPSRV TVHALPAGGSFGRRLDHDYVVHAIQIAATMPGTPIKTTWSREEDMTHDFPRPLHLAVG RGAVGNGRVLAYDLDSISPSLVSSWFGRIFIVPPGPDTLLVWGAFDQPYAIPNYRVTG YAAPPMMPIGSWRSPGACSNSFFHESFLSELIHAAGADPLEERLRLIADADSRRVLEA VGEMSNWNGADIGPGRGRGIAFAHTHGVPVAEVIDVTMTDRGIRIDEVWIAADCGTVF DPVNAEAQLTGAAIFGLGHAMNCELTYENHAVQQTNFHTFEGMRLHQTPLFHTRLLER SEQVRGLGEPATAPAAPALADAIFAATGQRLREMPFSRSVEFA" gene complement(748112..748570) /locus_tag="SKA53_03794" CDS complement(748112..748570) /locus_tag="SKA53_03794" /note="COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /codon_start=1 /transl_table=11 /product="isoquinoline 1-oxidoreductase, alpha subunit" /db_xref="CDD:11788" /translation="MNLTINGTDHTVDLPDDMPLLWALRDGLNMTSVKYGCGIAQCGA CTVHIGGEAVRSCQVALADVWGEITTIEGLGTPDALHTIQAAWIEHQVAQCGYCQSGQ ILQASDLLARNPQPTDEDIDAAMSGNLCRCGTYPRIRAAVHAAASAMREV" gene 748784..749776 /locus_tag="SKA53_03799" CDS 748784..749776 /locus_tag="SKA53_03799" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /db_xref="CDD:14970" /translation="MATEVACRILGVDPQVMLETAGLGELTPGRSEARVTAQQYFDCW NTMEVLSPRPDYVPYLGVAISRGPVIPVFFTLSCAPDMETGLRRLAQFKSLLGPTVMR VFRDGDLLRLEYESVDARVPMPPSLGALQLVVAVENIRGATAHLVCPVAAGFDGSDEE RHMIAGHLGIMPERSQAAYVAFAPEDAKRRFISENATLWADVEADLKLQLAAQNDRLP IADRVRGALVDLMPAGRTGAEDVGLALGISRSTLQRRLREEGTSYQEVLDAMRRDLAI RYLTKTSLRADEIANALAYRDANSFSRSFRKWTGLSPLAFRQADNESSVSGESG" gene complement(749805..750218) /locus_tag="SKA53_03804" CDS complement(749805..750218) /locus_tag="SKA53_03804" /note="COG3686 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="inner membrane protein" /db_xref="CDD:13008" /translation="MTLETLSILIYGLLIFGAVVVQGTYAGLTAGLAFGFSNREGVQP GMGAVGRRIDMTLANLKEGAIMYMPLALLAVSLGVSNEWTSGAALLTIISRLVYVPVF YLGIPVARTLVWLPSFFAIPALAIGILVEVPGALP" gene complement(750340..750753) /locus_tag="SKA53_03809" CDS complement(750340..750753) /locus_tag="SKA53_03809" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTPTIKWAITRLMGATIFRAQTILFLPELQMFGGIAPDGWFGPW LSDTIIGFALPVMLYLFWTRRSVAIWGALVAYNAVGAFDYSQGLITQMISPMPVEMAS AATVYVGIGLFMGFQLVALALLFRRDVIAEFKGRV" gene complement(750844..751338) /locus_tag="SKA53_03814" CDS complement(750844..751338) /locus_tag="SKA53_03814" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSLSPSRNLLVMNVQISISLVSTIILCRWLFPDIVRADFAVAAL PVAVLHMFRFIGATVVMPGQLDAGISHKAKVQIAVGDLLVSLTEVLLTFAILEGFSET TVRTLAWIFVITCLIDMSVIQRFFIKEQFWNKKMGVVWLFQVLLSAPMVLGEVFVLYR LVTG" gene complement(751382..752161) /locus_tag="SKA53_03819" CDS complement(751382..752161) /locus_tag="SKA53_03819" /note="COG3967 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)" /codon_start=1 /transl_table=11 /product="oxidoreductase, short-chain dehydrogenase/reductase family" /db_xref="CDD:13273" /translation="MMTLSQGDPDLDLTSKIILITGGGSGIGLELTRQFVARGNTVII CGRDAGRLSEAARLTGAQAIAGDVTVAEDQERILSDIQAQHGRLDLLINNAGIFLAYD FKNDPDTLQKIENEIAINATAPLTLIRRALPLLEKSAQPAVLFIGSGIAFVASPGTPV YSGTKALIHHCAQTLRHQLQPHGITVFEAMPPVVDTDMAKVLKSNNFKKMKPADLVRD ILNGLHRNQTVMLLGQSRQIKLMSRIAPAFLFRQFAKTEFH" gene 752309..753322 /locus_tag="SKA53_03824" CDS 752309..753322 /locus_tag="SKA53_03824" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="virulence regulating protein" /db_xref="CDD:14970" /translation="MQSHERSPIYTSAILSGPICGMLGIRWEEVLTRAGIIATERNDR AFLVSAEEYLRLWAAIMELSGQQDVSKLLGLRMAGGPAIPVLFALSTAPDFETGIMRM AKFKSLFGPMQFVLSRSASEFTVRVTPDVATAPLPGTFSSPQIIYLHAQANALARHPI RPLSVCLPLPQDERERLADVFGQVPQHGDAMLTYARADARMIFISANTELWEATEADL QAQAMIQSKGLPLSERVRATMLEAFSITEPNIAHVCGRLKLSRSTLLRRLADEGATFQ MLLDETRKDLAIRYLLKSDMNNQQIAHLVGYRDPNAFQRAFRKWTGTTPQAFRTVITQ LDA" gene complement(753456..753845) /locus_tag="SKA53_03829" CDS complement(753456..753845) /locus_tag="SKA53_03829" /note="COG1475 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAAPGTIQIFVPLKVRKKNGRPKILPPDDYLPSEDHTQDPHILR AIGRAWAWRRRMEAGEFGTVRDLAIAVNLAERHVSRQLRLAYLAPEVLKRLVFGREVS AVTVMQLSECAGLPWPDQAGVVFGARN" gene complement(753845..754777) /locus_tag="SKA53_03834" CDS complement(753845..754777) /locus_tag="SKA53_03834" /note="COG1961 Site-specific recombinases, DNA invertase Pin homologs" /codon_start=1 /transl_table=11 /product="resolvase" /db_xref="CDD:11669" /translation="MGRLTLNILLSFAQFEREVTAERIRDKVKASRMKGIWMGGNIPL GYDVRDRKLVVNTQEATTVVHIFTRFVEVGSATVLARDLRKERVLSKKGTLIDKGYLY RLLNNRVYRGEAVHKGTAYPGEHDAIIDARLWDQVHDILGESPRMRANNSRTQTPALL KGILFTATGAAMTPSSTKKGTRRYSYYVSMDLLKNREAPKDGIPQRLPADTVEGAVVN EIQRILRTPETTAQVIAKLDRDDITEAEAIAALRQFPELWAHLFPAEQARILQLLVRR VTVTAEGLIIDLRTDAIAGVMRDIMTPRRLEAAV" gene 754819..755094 /locus_tag="SKA53_03839" CDS 754819..755094 /locus_tag="SKA53_03839" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MANESWPLPDRLLHHETLYLSQSENFGRRNHPRFRSIMGSAGVL IWISGFASDGLVWEFAPARPLPGSNHLMWFLSVILDSAAGADAGRAS" gene 755158..755550 /locus_tag="SKA53_03844" CDS 755158..755550 /locus_tag="SKA53_03844" /note="COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAALPFNDNRIEELVLRFNALMAKEATDISNLGSNASDDAVAAS LQETGGDLRRDEITQEIESMNDEQQDALVALFWIGRGDREPAEWGVVKTLARQQHKGL VSRYLLGQPEVGEFLTAGLEKMLEYGVD" gene 755641..756879 /locus_tag="SKA53_03849" CDS 755641..756879 /locus_tag="SKA53_03849" /note="COG0025 NhaP-type Na+/H+ and K+/H+ antiporters" /codon_start=1 /transl_table=11 /product="Na+/H+ antiporter NhaP" /db_xref="CDD:9901" /translation="MSQFELVAMLLILTATFSWVNVKLAVMPHTIGLLVMGLSASLIV IGAEAVMPGLFNYEGLSVLLRQVDFQQTVLEGMLAFLLFAGALHVDVVSLRSRALTIG TMASLGVVASTAIIGSVVWAASDLLGVTISLPWALVFGALISPTDPVAVLATLKAVKV PKGLKIVMTGETLFNDGVGVVLFAVLVHAATGDEFGAFQVAEMFVVEAFGGAALGAVT GYVAYRAMRAIDDYSIEVLISLALVVGTYAIASRLIVSGPLAVVVAGLLVGSRGPRDA LSEETQRYLFGFWTLVDEMLNSVLFLLIGLEVLVLRFEPAFGWLMALAVPLVLVARLI AVSGPVLLLGMFRKFESGTIPVLTWGGLRGGISVALALSLPEGAEKSALLAATYGVVL FSLIVQGLSLRVVIQRVLLK" gene complement(757214..758125) /locus_tag="SKA53_03854" CDS complement(757214..758125) /locus_tag="SKA53_03854" /note="COG3509 Poly(3-hydroxybutyrate) depolymerase" /codon_start=1 /transl_table=11 /product="polyhydroxybutyrate depolymerase" /db_xref="CDD:12837" /translation="MSTSSFASERLCVLENFGTDPGLLSADTYIPESFPKNGPLVVVL HGSTQSPESYDIGTGWSTLADECAIALLFPGQRRANNLIGSFNWFETGDSQRGVGEPL SIRHMIKQVVDGHAIDPSRIFITGMSSGGAMTSVMLATYPEVFAGGAIIAGLPYHSAT NIMEALVRMNGYGSPSDRQLDALVRDATTFTGPWPTISVWHGDSDTTVDNSNASSIVR QWQKIHKVEGPPTHVEMVDGYPREVWCDADGRVVIEYYIIGDMGHGTPISADGDKGLG KEGKYMLEVGISSTRLIADFWGLTQSA" gene complement(758341..759024) /locus_tag="SKA53_03859" CDS complement(758341..759024) /locus_tag="SKA53_03859" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAQENVQVITDWSYDSLYADGWSVEDMFDTTQIIGASGEDIGDV ENVIFSNDGKVLGIIAQVGGFWDIGDTHVHVPWDEVDIGETIQQAQVPVTEENVDNYD VFGDYGDSEQVITQADTATTGVVDDDLVAGPGIFKATDLIGRYAYLSDGVRYGYVSDI IVENGVISAIVADTAAYGRQGYYAYPYSYRGTTPMANNSRYDVPYSGTEIDTIENFDY EQLQSRGME" gene complement(759690..759926) /locus_tag="SKA53_03864" CDS complement(759690..759926) /locus_tag="SKA53_03864" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSDYSTTSGVAALSICEALLLALNDAKVLPENEILGVLKDAATA HANAEGSEKEIMEHNAVAALINRIITGGNSVRRP" gene 760042..760803 /locus_tag="SKA53_03869" CDS 760042..760803 /locus_tag="SKA53_03869" /note="COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /codon_start=1 /transl_table=11 /product="transcriptional regulator, Crp-Fnr family" /db_xref="CDD:10533" /translation="MVRVVYFEKEPIIDTRPLARKLGAFVTLSTAELDVLERLYKRKR TFLAGHDLVHQGQEDQACYILLSGWACSYKLLHDGQRQIVDFQIPGDFLGLRSVVLHV SDHSIEPVTDIEVTEVYAFDLLDVFAKTPRLATAVLWTASRDEAMVVEHLVGIGRRGA AERIAHFLLELCARLTLVGMGSKAGYACPLNQYLIADAIGLSAVHVNRVLRQLREHGM VTFRNGYVTFDNYDRTVAFADFEVSYLDQSMPLLK" gene complement(761241..761858) /locus_tag="SKA53_03874" CDS complement(761241..761858) /locus_tag="SKA53_03874" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MELLQAFTYAVIDQCALPSNQIATLLGYLHIVFQPFFINMLSMY FIPNFVREKIQWPVYAVCFVSAIIMLLQLYPFEWAGSCPLGEVMCAERMCSVSGDWHI AWEVPTNGMLNFITVDSWASFLTAYPSYFVAAFLMPLLYGSWRLTLYHFVVGPRLAML LTSNPNEVAAIWCLLSIGILLLVVKTPIRQYMFVKSWFLWPKQIV" gene complement(762198..762356) /locus_tag="SKA53_03879" CDS complement(762198..762356) /locus_tag="SKA53_03879" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSTILIIIILLLLFGGGGGYYGYNRYGTRGLGGVLGLVIVIFIV LWLLGVLI" gene complement(762480..762554) /locus_tag="SKA53_03884" CDS complement(762480..762554) /locus_tag="SKA53_03884" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNQIVYIVGLVVIVLVILGFFGLR" gene 762834..763613 /locus_tag="SKA53_03889" CDS 762834..763613 /locus_tag="SKA53_03889" /note="COG3861 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26367" /translation="MLIEASTLKGFKISATDGSVGTVTDFLFDDQSWTLRWVVVETGS WLSGRKVLLPVSVLGHPDTSANSFPVRLTTKSVKDSPDIDTHNPVSRQHEERMYRHYN MSPYWGNGFYMGGYGGWTAGMSETHYADSMLRQDALDAKRNQQRHQSDEPHLRSINAM TGYNLHATDGAIGHVEGFVIDDTDWTIHFLTVNTKNWWPGKHVVISPRSAKNVSWADS VVNLDVDRQTVMNSPTYDPSVPMDAAFETRMARHYIPDATK" gene complement(763824..764225) /locus_tag="SKA53_03894" CDS complement(763824..764225) /locus_tag="SKA53_03894" /note="COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit" /codon_start=1 /transl_table=11 /product="pH adaption potassium efflux system protein PhaG" /db_xref="CDD:11036" /translation="MDMELWQEIIVAAFLVIAGVFGFVGSYGLIKLPDPMTRLHAPTK TTTLGVGGVLIASMIYFLFSDAKFSFHELMITLFLFLTAPITAHFIAKANLHTSVKRE DVSPTGSDRPWAGFESDEDRRIAEAKSDIDE" gene complement(764234..764506) /locus_tag="SKA53_03899" CDS complement(764234..764506) /locus_tag="SKA53_03899" /note="COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit" /codon_start=1 /transl_table=11 /product="pH adaptation potassium efflux system protein PhaF" /db_xref="CDD:11919" /translation="MILPYALIFATGCFCVALLMNLWCVIMSSGVPERILALDTMVIN FIAILVLYGIIEGTAVFFEVSILIAMVGFISTVAYARFMLRGNIIE" gene complement(764503..764994) /locus_tag="SKA53_03904" CDS complement(764503..764994) /locus_tag="SKA53_03904" /note="COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit" /codon_start=1 /transl_table=11 /product="pH adaption potassium efflux system protein PhaE" /db_xref="CDD:11573" /translation="MIARLLPHPLLTLLLVAVWQMLVNYVSLGTLVFGLILGILIPLL TAPYWPDRPRLKNPAMIVEFILVVLWDIVVANVSVAKIILFKRNKDMRPTWITIPLDL RSPEAITVLAGTITMTPGTVSADVAADGSSLLVHCLDATDPDAVRDDIKQRYERRLRE IFE" gene complement(764991..766547) /locus_tag="SKA53_03909" CDS complement(764991..766547) /locus_tag="SKA53_03909" /note="COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit" /codon_start=1 /transl_table=11 /product="pH adaption potassium efflux system protein PhaD" /db_xref="CDD:10521" /translation="MNHWIIAPVLLPALVAAIIILVLRYQVTTQRVFSVASTVALIGI GIGLLVHSMSGQIDVYELGNWPAPFGIVLVLDRLSAMMVLLTAVLALAVVLYAIGSGW DKRGHHFHALFQFQLMGIFGAFLTGDAFNLFVFFEVLLIASYGLMIHGGGAVRLRAGV QYVIYNLLGSTLFLFALGTIYAVTGTLNMADLAVRVADLPASDTAMIRVAAVLLLLVF AVKAALIPLHFWLPATYAEAPAPVAALFAVMTKIGAYAIIRIYTLVFGTDVAATADII GPWLLAGAIVTLVVGMIGVLGASHLGRLAAFAAIGSMGTLLIAIALFTPQAITAALYY MIHSTLAGAALFLVVDMVRARRVAEDDAIAPRPAIVQNGLVAAYFFAAAIAMAGMPPL SGFLGKLLVLDAVRDHELVWLIWATILITSLVAVVGFARAGSLVFWNVTPEVDQNAPP HIQTALTFVATGGLLAAIVMLTVFAGPVTTFLSDTSAQVFDKQSYIAAVLETARAIEV ENLPLEGSQK" gene complement(766544..766897) /locus_tag="SKA53_03914" CDS complement(766544..766897) /locus_tag="SKA53_03914" /note="COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit" /codon_start=1 /transl_table=11 /product="pH adaption potassium efflux system protein" /db_xref="CDD:10735" /translation="MEYLLASAIGALTAAGIYLTLRLRTFPVILGISMLTYAVNLFLF ASGRIAINLPPVLLNNTPTYTDPLPQALVLTAIVISFGMTAVVVLIALGAYLSSNDDH VNLSDGPVDAQEPSK" gene complement(766897..769755) /locus_tag="SKA53_03919" CDS complement(766897..769755) /locus_tag="SKA53_03919" /note="COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit" /codon_start=1 /transl_table=11 /product="pH adaption potassium efflux system protein PhaA" /db_xref="CDD:10738" /translation="MSLIIIAALPFLGALLPGLMIRAGRDACAWTTASVTLTALVGLL VHAPAVMRGEVIQYQLEWMPLLGLNANFFLDGLGLLFAGLILGIGLLIIIYARFYLAR QDPMGQFYTYLLLFQGAMVGIVLSDNILLLLIFWELTSLSSFLLIGYWKHLPEGRQGA RMALAVTGMGGLALIGGMLILGNIVGSYDLTVILENKELVQASPHYLPALILILLGCF TKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGLFLMARLWPVLAGTPEWFYIVAT TGLITMVLGAVIALFKDDLKALLAFSTVSHLGLITMLLGFGTPFAAVVAVFHIINHAT FKAALFMSAGIVDHETHTRDIKRLGGLRHLMPVTFIIVTVAALSMAGIPLFNGFLSKE MMLDAATNTVWNGNPWILPALATLGALFSVAYSFRLIVHTFLGPKRTDYPAKPHDPGF GMWASPALLAVLVVLIGIMPALMVGPLVAVASGAVIGGDLPYYSLKIWHGVNLPLYLS ITAVVGGLILLALHRPLDAAWTKARRPEAKVIFDAIVGAITRGAHGLTDGLHNGAMTR YTAVFIVSVTALGAAAWFGGTAPGPTRAAIDIGVVPLIGWFLLVGATACMVAFHHNRL LALVLMGIVGLIVSIAFVYMSAPDLALTQISVEVVTVILLLLALNFLPKTTPTESSKA RQWRDGTIAVIGGLAVGGLALAVLLSDFSQDSISAFHLANSKPGGGGTNVVNVILVDF RGFDTFGEIIVLGIAALVIFAMTESVLTSPVGARLRQRPINPDQAGDRHPLMMVIATR VMMPIALMVGVFIFLRGHNEPGGGFIAGLVVAIALLMQHMASGFDWASARQRFPYHTI IALGIFAAALTGIGSWLAGRPFLTSNYGYFQIPPMNKFELATAMAFDVGVFLCVVGAV MLALESLSRFAHRAGERPSPYPMDIDPSRDSAQMAKDA" gene complement(769909..770295) /locus_tag="SKA53_03924" CDS complement(769909..770295) /locus_tag="SKA53_03924" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMGLIAALTIKICPVPFAPRKVHVVFCADCFPSGPRHAGHGQHH NTVALRMLALAWQRMITTQGCVNLRCLLAVFYCAFDIGNTHPPLPKSAPVNGMIGQLH ARITDLWQSDRRVETDQNQAMPHDHM" gene complement(770428..770859) /locus_tag="SKA53_03929" CDS complement(770428..770859) /locus_tag="SKA53_03929" /note="COG3108 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24824" /translation="MYNGRTGETLDTIYWIEGEYIAEAVREINLHMRDWRTGEAVQMD LRTIDIMSGALRLMETSEPYLLLSGYRSPATNAMLRSRSSGVARDSLHMRGQAADLRL RSRSITQMAQAATAFNAGGVGRYGRSNFVHMDCGPVRTWRG" gene <771472..772410 /locus_tag="SKA53_03938" CDS <771472..772410 /locus_tag="SKA53_03938" /note="COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase" /codon_start=1 /transl_table=11 /product="UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase" /db_xref="CDD:10771" /translation="TPAYGAALQTGAARAAIVWPDADWQALGLQAAIIAPRARLAMAR LTQLMDQTPAQTGISAQALVDPTAMVAADASIGAFCVVGAGAVIGAGTWIADQVSIAP GVVIGAGCRIYAGVRLQAGVRLGDRVILQPNVVIGGDGFSFVTAEPSNVEIARETLGD AALQAPDDPTWHRIHSLGGVLIGDDVEIGASSTVDAGTIRATQVGQGTKVDNLVQIGH NVIVGAHCLLCAQAGVAGSTVIGDRVVVGGKAGIADNLKIGNDVVLGGGSVVLSHVPA GRVMMGYPATKMQLHIDSYKALRRLPRLLRDIATRQ" gene 772475..772735 /locus_tag="SKA53_03943" CDS 772475..772735 /locus_tag="SKA53_03943" /note="COG0236 Acyl carrier protein" /codon_start=1 /transl_table=11 /product="Acyl carrier protein, AcpP" /db_xref="CDD:10111" /translation="MTTDDRIIAIIAEQAMLEPGDVTLDASLADLGIDSLGLVECIFA IEEGFDITVPFNANDPTASDFDISSVGAIIAAVKQLQTDQAG" gene 772735..773946 /locus_tag="SKA53_03948" CDS 772735..773946 /locus_tag="SKA53_03948" /note="COG0304 3-oxoacyl-(acyl-carrier-protein) synthase" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) synthase" /db_xref="CDD:27989" /translation="MARVVITGAGTINPIGGDVPSTFAAMREGRCGIGPLDIPDVERL AIQIGGQIKGYAETDHFNRQQIALYDRFTQFTLLAARQAVGQSGLKFTGALADQSGVI FGTSGGGLNTQDENYRAVYEEGKNRVHPFIVPKLMNNAAASHVSMEWNLRGPTFTVAT ACASSNHAMGQAFNMIRCGMTKVMVTGGSEAMLCFGGIKAWEGLRVMSKDGCRPFSAT RNGMVQGEGAGVFVFEDYDHARARGADILCEVIGFAMTSDASDIVMPSKQGAARAIAG AVRDAGVPLDAVGYINAHGTGTAANDKTECAAVADVFGAHADKLMISSTKSMHGHLIG GTGAVELLACIMALRDGVIAPTIGYEEPDPECALDVVPNVARDATIDVALSNAFAFGG LNAVIALRRFA" gene complement(773943..774527) /locus_tag="SKA53_03953" CDS complement(773943..774527) /locus_tag="SKA53_03953" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRRTTTALTLVALLAIGTQATAQDDTTAPAAADALDLGEPVGPQ VGEVYVADTQGDWQVRCIRAPEGQDDRCNLYQLLTNAEGAPVAEFNLFRLPEGGQAVA GANVVAPLETLLTQQLTLSVDAGEPRRYPFSFCNDAGCVARIGLTQTDIDAFKTGSTA TLRLVPAATPDEEFLLSMSLAGFTAGFDTLAVIP" gene complement(774941..776242) /locus_tag="SKA53_03958" CDS complement(774941..776242) /locus_tag="SKA53_03958" /note="COG4536 Putative Mg2+ and Co2+ transporter CorB" /codon_start=1 /transl_table=11 /product="CBS domain protein" /db_xref="CDD:13708" /translation="MEPSTLDATFWATAAAIVVLLILSGFFSGSETALTAASRGKLRS AADKGSKGAQRALKVTEDNERLIGSVLLGNNVVNILATSLATAILTKVFGQNGVAAAT LIMTLLVLIFAEVLPKTFAITNPEKVASAVARPIGVIVLVFAPAVTAVRFLVRGVLYL FGVRTDPDSNILAVREEIAGALHLGHAEGWVEKEDRDRILGALDLNERTVEEVMLHRS GIEMVDAALPAQDILAQILQSQHTRLPLYRDNPENIVGVIHAKDLLRAMHKLLSGGEV DGQGLAVFDVMKVAMPPYFVPETTTLGDQMRNFLKRKTHFALVVDEYGGLEGLITLED ILEEIVGEIADEFDEYEPDQIAATADGAYIVDGGITIRDLNRAHDWQLPDDEANTVAG LVIHEAQMIPVVGQVFSFHGFRFEVLTKEENRLATLKIRKL" gene complement(776293..777213) /locus_tag="SKA53_03963" CDS complement(776293..777213) /locus_tag="SKA53_03963" /note="COG4974 Site-specific recombinase XerD" /codon_start=1 /transl_table=11 /product="tyrosine recombinase XerD" /db_xref="CDD:14105" /translation="MARWVQTFLQAQAAELDAATNTQLAYARDLQGFAEWLASRGLHF MQVTQDQIESYLIDCAADGLAKSTRARRLSAIKQLFRFAYDEGWRADNPALQIKGPGR AQRLPKTLDLAEVDRLLDAARASPRDGLRNGCLMELLYATGMRVSELVSLPVSAARGD PRMLLVRGKGGKERLVPLSPPARAAMAAWLAARDAAQEVAQKAGKPASKFLFPSHGKA GHLTRHAFFGLIKGFAVTAGLSPERVTPHVLRHAFATHLLAGGADLRSIQTMLGHADI ATTEIYTHVLDQRLTDLVLQHHPLAKPTKS" gene complement(777231..778754) /locus_tag="SKA53_03968" CDS complement(777231..778754) /locus_tag="SKA53_03968" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTQTSAVLALAVLTTGPAAARDPLSSIDWLSQEAVNAVNPDEPP VVQSALPPDIAVMPLDRLSKDPVGLLPSDVTGLPHNIWSASNEQDIVALLRADRRDSL PAIVAFVKVLMQARADPPLGAGPDGALFLARVDRLVELGAVEQAKSLIELATPDTPPV FQRWFDLSLLTGTEDAACRVMNARPDLSPTNAARIFCLARSGQWPVAVLSLNTHRVLG DITLSEADMLARFLDPELFEGAPPLAAPSNVTPLTFRLFEAFGEPLITRGLPLAFAHA DLRGNNAWKAQLEAAERLARHGAVPENVLQNFYTARRPAASGGIWDRAAAIIRLDAAI SAGDPQAVSQHLPAAWDAMKQARTEVPFAKLYSAALQNMELRGEADDIANRAGLLSEQ YRTVAEKLAAAGGDSFDPFLIAIALGRPQDVPTSAPRALAIQAAFAGAPAPVELQNLV ANGKTGEAMLRAITLFNEGFAGEARSLTDALALFLLLDLDDVARRTSLELMILDRAT" gene complement(778741..778893) /locus_tag="SKA53_03973" CDS complement(778741..778893) /locus_tag="SKA53_03973" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MWRFLKLLIFLIILLAVGFVGYAYIGPVVFPSDFAAPAQEVTRP VTLDAN" gene 779044..779601 /locus_tag="SKA53_03978" CDS 779044..779601 /locus_tag="SKA53_03978" /note="COG0703 Shikimate kinase" /codon_start=1 /transl_table=11 /product="Putative shikimate kinase" /db_xref="CDD:10572" /translation="MASAAAYRLKRSVVLVGMMGSGKTAIGRSLASTLHVPFVDSDTA IEEAAALSIAEIFARDGEAFFRRRETEVLRRLLAGGAQIISTGGGAFLAAENRDMIAR DAIAVWLDADLNTLWERVRHKDTRPLLRTPDPKGTLTRLLDQRRDVYALAGLRLPVGI HASIDDTTQDALRLLATRPDFLETI" gene 779601..780713 /locus_tag="SKA53_03983" CDS 779601..780713 /locus_tag="SKA53_03983" /note="COG0337 3-dehydroquinate synthetase" /codon_start=1 /transl_table=11 /product="3-dehydroquinate synthase" /db_xref="CDD:10211" /translation="MQTKVHVDLPGRAYDIHIGPGLIADAGAHIAAFGGRRHICIVTD ENVASLHLPALQGALAAAGLTSDALVLPAGEATKCWAQLERVVEWLLAQKVERRDCII AFGGGVIGDLAGFAAAILRRGVRFVQMPTSLLAQVDSSVGGKTGINSPHGKNLVGAFH QPALVLADTDLLGTLPRRDFLAGYGEVVKYGLLGDADFFDWLEQAAPGMAAGDMAARV RAVTRSCEMKAGIVQRDETEQGERALLNLGHTFCHALEQATGYSDRLLHGEGVAIGCV LAFELSARLGLCSQEDPSRVRAHLRDMGMKVDIADIKGDLPDADALLDLMAQDKKVQD GQLRFILARGIGQAFITSDVPRDKVRALLQDALSPR" gene complement(780768..781079) /locus_tag="SKA53_03988" CDS complement(780768..781079) /locus_tag="SKA53_03988" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQFAPETQILILNAAILGVAYLGIFPSLREKTLARIMTVDLVLS VLAVGVAGALFWGRGLSFDMLVFSANWAVFSIVTLLIMEAPLFYVFAKKHGISLTGED R" gene complement(781086..781583) /locus_tag="SKA53_03993" CDS complement(781086..781583) /locus_tag="SKA53_03993" /note="COG0629 Single-stranded DNA-binding protein" /codon_start=1 /transl_table=11 /product="single-strand binding protein" /db_xref="CDD:10499" /translation="MAGSVNKVILIGNLGADPEIRSFQNGGKVANLRIATSETWKDKN TGERREKTEWHTVALFSEGLVRVAEQYLKKGSKVYIEGKLQTRKWQDQSGADRYSTEV VVQMGGTLTMLDGRSDGGGNTGGGDYGSGSSGGGGGGRSSYNDGGYGGGAPSGGSDMD DEIPF" gene complement(781665..783746) /locus_tag="SKA53_03998" CDS complement(781665..783746) /locus_tag="SKA53_03998" /note="COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter, ATP-binding protein" /db_xref="CDD:10318" /translation="MANLTTAEPILEIDRLSISFFTRLREIPAVMDFSATIMPGEALG LVGESGCGKSTVALGVMQDLGANGRIVGGSIKFKGEEMNTMSPARLREIRGSKIAMIY QEPMASLNPAMKIGKQLMEVPLIHDKVSEKEAYARALEVVTDVKLPDPKRILNSYPHQ LSGGQQQRIVIAMALMSKPSLLILDEPTTALDVTVEAAVVQLVKDLGHKYGTSMLFIS HNLGLVLETCDRICVMYSGEAVERGSIGDVFDDMQHPYTQALFRSIPLPGADKNDRPL VAIPGNFPLPHERPKGCNFGPRCDYFQPGRCDQEMIPMVRVAGDDRHQTRCLRNREID WNAPVTAAATKVKHAPGQVVLKMENLKKYYEVAANALFGGDRKVVKANETLSFEAREG ETLAIVGESGCGKSTFAKLLMGLETATDGQILLDNISIGDVPIEKRSTKNVADIQMVF QNPFDTLNPSMSVGRQIIRALEIFGIGTNDTERRARMLELLDLVKLPRAFADRMPRQL SGGQKQRVGIARAFAGDARIVVADEPVSALDVSVQAAVTDLLMDIQREHNTTLLFISH DLSIVRYLADRVMVMYLGHVVELGTTDQVFSPPYHPYTEALLSAVPIADTRVTKKHIV LEGEIPSAMNPPPGCPFQTRCGWKSQVPGGLCDTQVPPVRLLAPGHQIKCHLDDATLA AMEPVIQIAAE" gene complement(783835..785280) /locus_tag="SKA53_04003" CDS complement(783835..785280) /locus_tag="SKA53_04003" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, permease protein" /db_xref="CDD:10891" /translation="MDPLSWTGGLGAFLNPALAITAALCGIVLVVQTGLRMGSAAVTL QSNPDGTLQGRGGVLGALDTALIYLVWALVALLLAYVTVPLVMPYGSAGILGEITRRL LPVWIALVATFALSIRFKRRLGLYGKLFDSTVGMIGLALVLFWVYVAVFVGIFDMIVT HDYLRQVSGLKNALPGVVAPDGTEGAIPHYLLGGDNLARDIFSRVMAGSVFVIAIAPL ATIFAFMVGITLGLPAGYYGGKFDTALSFAANLILAFPVILLFYLLVTPEIVQTGIPS YMAAFLFAFPLIFIGVLVNTRYYTQPAKRNAIMLPVLGSLGWLYLSAINASGTVIDFL PAWADLFDISVLVVFVSVVFVNAPTVFRIVRGLTLDLRTRDYVAAAQTRGEGAWYIML WEILPNARGPLIVDFCLRIGYTTILLGTLGFFGLGLSSESPDWGTTINEGRKLLLIYI HPALPPAMALLSLVLGLNLLADGLREESLKD" gene complement(785293..786339) /locus_tag="SKA53_04008" CDS complement(785293..786339) /locus_tag="SKA53_04008" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, permease protein" /db_xref="CDD:10471" /translation="MVSFILRRIGIMVLTALCLTFIVFWLTNLFPNLEKLAKTQGNFR MSDDAVLSYLGNNGYLQPLPVKYGQWLGVLPGYVIAGTDGQMRARCATGGQDIVDAAR FCGILQGNWGYSTVFREDAGSIIATRLGLTGKLMFWVMLVMVPGALIIGVMAGMNEGS RTDRSLSTVSILSTATPEYVSGVVFISVFGTATFGMQWFKGTATAAMDDANFENFFLP VLTIALYGMGYIARMTRASMTEVMTAQYIRTARLKGVAFSQIVLRHALRNALIAPFTV IMLQFPFLLNGVVIVETLFNYKGFGWTLVQAASNNDIELLLGVSIVSVFVVLTTQLIS DIGYVFLNPRIRIA" gene complement(786420..788078) /locus_tag="SKA53_04013" CDS complement(786420..788078) /locus_tag="SKA53_04013" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide ABC transporter, periplasmicsubstrate-binding protein" /db_xref="CDD:10615" /translation="MTKHDQSLHPIALQYAQDEKAGKLSRREFMARTTAIGVSVTAAY GLLGLAAPARANAHMQQGGTVRMQMEVRAVKEPRAFDWPQITYVTAGWLEYLVEYNND GTFQPMLLESWDVNDNATTYVLNVRQGVTWNDGTPFTAQDVARNIAGWCDTTVEGNSM AARFSAIINPETGQALDGAIEVIDDHTVQLNLPAPDITLIAGMSDYPAAITPAGFNPD TMLENPVGTGPYLPETVEVGIKATLVRNENHDWWGYAAGKGAYLDRIEYIDYGTDPSA WVAAAAADEVDIIYETVGDFVDIFNSIGFEESSVASSSTICIRPNQRAEIDGVRPYAD KRVRQAIAMAVDNAVCLELGYAGRGEVARNQHVGPMHPAWADVPAMPHDPARALELLQ EAGMADFEMDLISIDDDWRKNTTDAVAAQLRDAGFNVKRTVIPGATFWGDWTEYPFSS TDWNHRPIDTQTLGLAYRSGEAWNESGFANAEFDALLAEANAIPDADSRRVVMQRLQE IMTDEGVTLQPYWRTIYRHAKPGFVGWDMNIAYLPHIYKIGIAA" gene complement(788108..788182) /locus_tag="SKA53_04018" CDS complement(788108..788182) /locus_tag="SKA53_04018" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRRYGANPPYWGLHKAGTVHAGAN" gene complement(788288..789103) /locus_tag="SKA53_04023" CDS complement(788288..789103) /locus_tag="SKA53_04023" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="Helix-turn-helix, AraC type:Arac protein,arabinose-binding/dimerisation" /db_xref="CDD:14970" /translation="MSLMQNVPSALALTSLSHAGPAMRWRTEAMRSHPTARLILITKG QGRVTVAGLTNGYGPNNLIYLPPQTMYGIEVGPTVHGHVLTLPDTANWPADPVHLRLL DVWLQKEAAQYFDQIERELQPAGHPRAAALWLGLLAIFVDRQARAQVATPNDSRRDSA AAKLVARYTQLIARDFQLDRGVGSYAAELGVTPTHLARCCQQVAGRSALALLHDRIHY EACVLLRDTQIPINQIAETLGFHSAAYFTRSFQEKSGQTPTDFRRANERSMAR" gene complement(789167..790096) /locus_tag="SKA53_04028" CDS complement(789167..790096) /locus_tag="SKA53_04028" /note="COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase" /codon_start=1 /transl_table=11 /product="tRNA delta(2)-isopentenylpyrophosphate transferase" /db_xref="CDD:10198" /translation="MALVASGRYRMQMITIAPDTPVLIAGPTASGKSALALQIATQQG GVIINADALQVFAGWQVLTARPSADDLARAPHALYGHVPFDAPYSVGHWLRDLAPLLQ GALRPIIVGGTGLNFHALTCGLADIPATPDVIRAEADQIALPDLIAALDDATRDRIDL QNRARVQRAWEVWRATGRSLADWQDATPAPLLALDRTVAITLDAPKDWLDARIARRFD AMLDTGALDEARAMLAHWNPAHQSAKAIGAPDLIAHLQGQISLPQARDAAIIASRQYA KRQRTWFRARHKAWHHLDADHADIFATVKLSQS" gene 790154..790879 /locus_tag="SKA53_04033" CDS 790154..790879 /locus_tag="SKA53_04033" /note="COG0528 Uridylate kinase" /codon_start=1 /transl_table=11 /product="Uridylate kinase" /db_xref="CDD:10399" /translation="MTDTPKTTYKRVMLKISGEALMGDTAFGLHPPTVQRIAREVKSV HDLGVEICMVIGGGNIFRGLQGSAQGMERTTADYMGMIATVMNALAMQSALEELGIHT RVISAITMNEVAEPYIRRRAVRHLEKKRVCIFAAGTGNPYFTTDTAATLRANEMNCEA IFKGTKVDGVYDKDPVKHADAVRYDVVSYDEVLQKHLGVMDASAIALARDNNLPIIVF SLDEPGGFKGILAGEGTYTTVRD" gene 790955..791518 /locus_tag="SKA53_04038" CDS 790955..791518 /locus_tag="SKA53_04038" /note="COG0233 Ribosome recycling factor" /codon_start=1 /transl_table=11 /product="ribosome recycling factor" /db_xref="CDD:24166" /translation="MSDDFELDTDDLARRMDGAIANLRVELASLRTGRASGSMLEPIM VDAYGSPTPINQVGTVNVPEPRMVTINVWDKALVGKVEKAIRDSGLGINPQLNGTIIM LPIPELNEERRRELTKVAGNYAEQARVSIRNLRRDGMDQIKKAKSDGLSEDDQKFWET TVQEITDAHTKLVDETLETKQAEIMQV" gene 791541..792272 /locus_tag="SKA53_04043" CDS 791541..792272 /locus_tag="SKA53_04043" /note="COG0020 Undecaprenyl pyrophosphate synthase" /codon_start=1 /transl_table=11 /product="undecaprenyl diphosphate synthase" /db_xref="CDD:9896" /translation="MRHDMDQTTKTGPAHVAIIMDGNGRWAQQRGRPRLFGHHAGARR VREVLQSCPEHGVKYLTLFVFSTENWKRTQTEVAGLMLMFRKYIQREARALVDNGVRV RFIGDRIRLDDKLVSLMDELELLTAGNDLIHLTIALNYGGRDEVTRAAKRLAYEIEMG RLSHKDVDAETLSRFLDTHVLPDPDLVIRTSGEARISNFLLWQSAYAEYEFVDTLWPD FTAAEFGRVLARYGQRERRFGAVQA" gene 792275..793078 /locus_tag="SKA53_04048" CDS 792275..793078 /locus_tag="SKA53_04048" /note="COG0575 CDP-diglyceride synthetase" /codon_start=1 /transl_table=11 /product="phosphatidate cytidylyltransferase" /db_xref="CDD:25698" /translation="MTGQPPNPTKWDDLSIRIASSVAMTFIGAIGVILGDVWFQMLVV FVSAVMVWELWMMIRPTEPTTGMLLAALVASVMSGHLAYDSQWGLLLFLVAPLIGATQ LRTEIKTFFVFALGIQLAGWGLVHFRADYGFIWLLWLMSVVIVTDVFGYFAGKAFGGP KFWPRYSPKKTWSGTAAGWIGAALVGAVFMIFTDVGLVIVPISMALSFAGQMGDIAES ALKRRMGVKDSSTLIPGHGGLFDRFDALLGGALFMLLVADVFDIPGVAF" gene 793075..794244 /locus_tag="SKA53_04053" CDS 793075..794244 /locus_tag="SKA53_04053" /EC_number="1.1.1.267" /note="COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose 5-phosphate reductoisomerase" /db_xref="CDD:3177" /translation="MRRITLFGATGSVGQSAVDLIARDLDAYQVVALTGGRNIQKLAS DAIALRAELAVTCHDDCYAALKDALAGTGIAVAAGDAAIKQAAMRPVDWALSAIIGSA GLVPGMIALDHGTTLALANKESLVTAGPVLMARARAAGATILPVDSEHSAVFQALVGE DMAAVERIIITASGGAFRDWPKDKLASATLAQASSHPNWDMGQRITIDSASMFNKAME LIETKEFFGVPSSMIEVLVHRESLIHALVGFNDGALMAHVGPPDMRHAIGYALHWPDR RHLPVERLDLAKIGSLSFQAPDEDRYPALALARQVMDTGGLAGAVFNAAKERALDAFI AGQIGFLQMSAVVSGTLDKMSSGGGLQIQEMTLDDVLEADRLARIYAGEITTQIG" gene 794249..795583 /locus_tag="SKA53_04058" CDS 794249..795583 /locus_tag="SKA53_04058" /note="COG0750 Predicted membrane-associated Zn-dependent proteases 1" /codon_start=1 /transl_table=11 /product="membrane-associated zinc metalloprotease, putative" /db_xref="CDD:10618" /translation="MDLTQFMPVFGNFAFMIMAFVVALSVIVAIHEYGHYIVARWCGI HADVFSLGFGPVIYSRTDARGTVWQIAALPLGGYVKFLGDTNAASVGSDGSVDAADAR RSMAGAPLWARTLTVAAGPVFNFILAIAIFTGSIMYQGRVADPFTIGDIRPLPAQFQS DLRAGDVLLSVANVAFSVPERQMSLLDLLPVQERLTYQITREGRALAVEGPYPMPPLI SALAPRSAADNAGLRIGDVITAVDGDPIFGFPQLQDKVISAQGAPLNLTIWRGGQDLD VTLSPRITDEPQPDGSFTQSYRIGIVGDLMFTPQTESVGLIAAGRLGVEGLWNTATTS LSALRHIIIGQISTCNLSGPVGIAETSGSMARQGTQSFIWFIGALSAAVGLINLFPIP VLDGGHLMFYAYEAVTRRKPSDRAVQVFMFIGLALILTMMSFTILNDTILCR" gene 795674..797995 /locus_tag="SKA53_04063" CDS 795674..797995 /locus_tag="SKA53_04063" /note="COG4775 Outer membrane protein/protective antigen OMA87" /codon_start=1 /transl_table=11 /product="putative outer membrane protein" /db_xref="CDD:13913" /translation="MSGQADEMQGFGERRMAQGAATIRMVATVTGLAVLSAGAAGAQD FAFNVVTIEGNQRVADGTILSFAGISAGATLSAADLNTAAQQIRESGLFETVDVVPQG GTLVIRVVEFPTINRISIEGNTRIRDAQLLPLLQSEPRRAFNPVQAEADTNAITQVYA SEGRINAVVTPRIIRLAENRVDLVFEVAESGVTEIERISFLGNRTYSEGRLRRVLDTK QAGLLRALVARDTFSPDRVAQDRQLLTDFYMSRGYADFEVLNVDVTLTSERDAYLVTY NIREGQQFNFGTVTVSSTIPGVDPAVFQDAIRTRDGAVYSPVTIETDITRLERLAVQR NVNFVRVEPRITRNERALTLDLEYVLVEGPRVFVERIDIQGNGTTLDRVIRNQVGVVE GDPFNPREIRDSARRIRALGFFENATVDTRQGSSANQVIVDVGVTEGPTGTLSFGANY NTDTGVGLLASYGQSNFQGRGQQLDFDLSTAETNQRLSFRFAEPQLLGRDLRGGLEFS YRQTNNENASYDTQNGRFSPSLAFPVSDNGRLSVFYAFNYADLTNVATTSSQILRDEE TIGAVATNSLGYAYSWDSRRAGIDPNTGYILRFGQEFGFGDSQFIQTTAFAGAETKVL NEELTLRATVEGGYLDYTDGQSRVTDRFFLGSRLMRGFDAGGIGPRARDGDDAIGGNA FAVARLEAEFPLGLPSEYGISGGLFYDYGSVWDSGYAGQVDYDDFTARSVIGAAIFWT TPIGPLRFNFTEPLDVQARDKTRAFDVTISTNF" gene 797995..798516 /locus_tag="SKA53_04068" CDS 797995..798516 /locus_tag="SKA53_04068" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12178" /translation="MRLWSAIAVWLLLALPLAAQQSGPQVLIVDSDRLFLETQYGRQI ASDLAARTAAVQAENDAIVAALTEEERSLTQRRPGMDPAAFRIEAAAFDSKVQEVRRA RDAMNGELAAEAAKARDMFEERAQAVIANLMLERGATLVMEQRNVILSVRTANITDQA ITRIDQVLGQGTP" gene 798597..799058 /locus_tag="SKA53_04073" CDS 798597..799058 /locus_tag="SKA53_04073" /note="COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases" /codon_start=1 /transl_table=11 /product="beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ" /db_xref="CDD:10632" /translation="MSDPITTADIQLIQKILPHRYPFLLVDKVHSIDGTSSAVGIKNV TMNEPHFQGHFPGNPIMPGVTIIEAMAQTSAVMVGASLGLINGDLLVYFMAIDGCKFR RKVVPGDVLEMRVETTRGKPGGKVWRFKGVATVDGELAAEAEFTAMMDLQG" gene 799058..799840 /locus_tag="SKA53_04078" CDS 799058..799840 /locus_tag="SKA53_04078" /EC_number="2.3.1.129" /note="COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine acyltransferase" /db_xref="CDD:10770" /translation="MAGIHPSAVIADGAQIGADCSIGPFCVIGADVVLGDGVTLKSHV VVDGDTQIGAGTVVFPFSVIGEIPQDLKFAGEKTQLRIGARNRIREHVTINTGTAQGG GITRVGDDGLFMAGCHIAHDAQIGNRVIIVNSSAVAGHCVIEDDVIIGGLCGVHQWVR IGQGAIIGAVTMVTADVVPHGLVQGPRGVLDGLNLVGLKRKGVDRADITALRAAFQML KDGEGNFQDRARKLGDETDSAYVQDMVRFILGPSDRNFLTPG" gene 799840..800718 /locus_tag="SKA53_04083" CDS 799840..800718 /locus_tag="SKA53_04083" /note="COG3494 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12822" /translation="MLALIAGTGDLPPALLVRLPERPLVCALQGFAPQITPDITFRLE HLGSFLADLAARGVTRICMAGAVKRPAIDPAQIDAATLPLVAGLQAALAKGDDGTLRG VIAILENAGFAVVAAHDLAPDLLPAAGVLAGRVTPQLRLDAVLGEQTIAAMGQADIGQ ACLVRLGHVIAREDQAGTDAMIARFAPAGDPLWGSVDLVGDLLGTAAEWLSGADGVPV DARGAVLFKAPKPAQDRRADLPVIGPDTARGAVAAGLSAIVVEAGGVIVLDLPQVIAT LDRAGVCFWVRPKGGA" gene 800715..801845 /locus_tag="SKA53_04088" CDS 800715..801845 /locus_tag="SKA53_04088" /note="COG0763 Lipid A disaccharide synthetase" /codon_start=1 /transl_table=11 /product="lipid-A-disaccharide synthase" /db_xref="CDD:10631" /translation="MRVFVIAGEASGDKLGAALMAGLRQLRPDVTFDGVGGPLMQAEG LVSRFPMDELSVMGLAEILPKYRALKRRIAQMAEAVVHTQPDVLITIDSPDFCLRVAK LVKARSTIRTVHYVAPTVWAWRPKRAGHMAHHIDHVLALFPFEPPLMQAAGMACDFVG HPVVTDPIANADDAAALGDGTVVLVLPGSRKGEVSRLAPRFGQAVARIAAQVPDARFV IPTTANVHDLVQAQVAGWPVPVTVLPPASPDKPAWFRRADVALAASGTVSLELAANGT PMVIAYDMAWLSRIIISRMLLVDTVTLVNLVSDTRVVPEFIGQACQPAPIADAVLAVL ANPTAQQAAMDLTMDRLGRGGGAPGLRAARAVLDRMATTRAK" gene complement(801894..802943) /locus_tag="SKA53_04093" CDS complement(801894..802943) /locus_tag="SKA53_04093" /note="COG2067 Long-chain fatty acid transport protein" /codon_start=1 /transl_table=11 /product="outer membrane transporter, OMPP1/FadL/TodX family" /db_xref="CDD:11775" /translation="MKQALTVGAALLLTTSMAQAAGLDRSGQGIGVIFEDGNSVELSF GSVRPSVSGSVALGATTQQSGNMAPDYTQFGFGVKMQVNDQISLALISDQPFGADVNY DTTPYPVVGSKAIVDSQGFTALVRYELDPIYSVHVGLRNVSAEGSVALVLPTAYASTY SSGSGSGYVAGVAYERENIALRVALTYSSEIDLALDGTAGNLTTTLPESYNLDFQTGI AADTLLFGSVRWVGWNGFALTDSLAGNLVSYTDDVYTYNIGIGRRLSDQFSASVSIGH EVSTGEVVSNLGPTDGYTSVQIGGAYDMGNGVEVSGGVRYVNVGDATTAIGSFSPEFT DNSVVAVGLKLAYSF" gene complement(803098..803964) /locus_tag="SKA53_04098" CDS complement(803098..803964) /locus_tag="SKA53_04098" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MSNTTQAAVWMIGAIIAFTTMAIAGRSVSVELDTFEIMLFRSLI GIIIVLAIAAYTGAIRQIRFRKLRLHLMRNICHFTGQNLWFYAIITIPLAQVFALEFT TPIWVLLLSPLILQERLTGIGLIAALIGFAGILIVARPDPGNMSPGLLAAAGCAVFFA LTAIFTRKLTRTEGITSILFFLTLTQAIFGLLSAGYDGDIAVPSALTLPWVVVISIAG LVAHFCLTKALSIAPASTVMPLDFVRLPAIAVVGMILYDEPLELLVFAGAALIFLGNF INIRHAGAVAQK" gene 804023..804181 /locus_tag="SKA53_04103" CDS 804023..804181 /locus_tag="SKA53_04103" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MILQAHALCETARCRGGDGFEPSGAPVSRDHDLPGWLLSLDGCH VLHDISAA" gene 804245..806602 /locus_tag="SKA53_04108" CDS 804245..806602 /locus_tag="SKA53_04108" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein McpC" /db_xref="CDD:24241" /translation="MRKLSSIPLSRKLPVIIAGIGLSAAIAVSALSYFDFRDTMLRSA KANFEVLADERGLAVESWLGEVRRNMLSYARTPMVVDTLPALSSSFGMMGTADDLQAS YIANNPNPVGQKSLLDRAPEVVPYNFQHGVLHPFFRNVVSSAGYSDVYLLNTEGDVVY SYAKNPDFATSVETGPYRNTGLGQVFRAARDGNAGQVYFTDYTAYGPGGGVVAAFMAT PVQNSDGVTVGVYASQLLTANLDEIVNREVGLGATGQIYIVGPDMKTRSTSRFAGGHR PLSDVSGLDQVAAGAAGAAEVFSGVTGINGRPVIAKVVNIEILGTPWRVIGELDMAEV LIPVNDIRAQMGILAVVVMVLAALLGYLTARSVLNPLSRLRDGMGRVAQRQYDFVVAD TGRSDELGVLATALVEFRDKLQAFDAADEERKKIQAEQARVVQELSKAMVALAEGDLT AVIHMPFDESYEQLRLDYNRTVTNLSTTVGSVVTSAVGIRERSLEMSSASDDLSRRTE NQAATLEQTAAALDELTASVRSAADGAREVESIVGNAQDDAIASEPVVQKAVAAMTAI EKSSDEISQIVGVIDDIAFQTNLLALNAGVEAARAGDAGRGFAVVASEVRALAQRSSE AAKQIKTLIAGSSDQVANGVSLVGEAGEVLTRIAKHISHISGLISEIAAGAVEQSTGL AEINIGVTQLDKVTQQNAAMVEQATASSHALNAEAGNLGELVARFQLDNNSSHSAAPM PHPAENVMMFQSPRSQQKSAKAVPAAMNGTHGRTNSMGPDDWQDF" gene 806875..807123 /locus_tag="SKA53_04113" CDS 806875..807123 /locus_tag="SKA53_04113" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSAGTIGLIAGRGVTFGGLVHVFCRAVNRPTATVPPAANKVCYS NLCHRRLCNSARFHCAHENAAAHKIEPWPRWICHANHC" gene 807271..808248 /locus_tag="SKA53_04118" CDS 807271..808248 /locus_tag="SKA53_04118" /note="COG2358 TRAP-type uncharacterized transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12030" /translation="MIKSILGTSAIALVAALPALAQEVDRTDWPTSFTVGTASQGGTF FVYGSGYANLISEELGVTGGAEVTGGPMQNMALVHTGEAAMGMTTMGPAQVSIQGKSP LAPGLEMTNVCAHFPMYETPFHAVALSSSGITALSEIPAGSRIGFGPAGSTGDTYFPE MMTALGIEYERRNGGWNDLGGQLQDGLIDVIGFAAGVPIPQVAELEASNDVNIIEFTA EEQALMTSLFPVSNFDIPAGTYASLTEPARAVSMWNFAIVNCDLPESFVYEATRVIME DNARMMQIHSSAATTVFENWDKNTVIPWHPGAARWFTENGATISADMIK" gene 808352..810607 /locus_tag="SKA53_04123" CDS 808352..810607 /locus_tag="SKA53_04123" /note="COG3833 ABC-type maltose transport systems, permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13809" /translation="MAKADISKFDDDTGPLVAEGADEEVIEYNRRLYEGWVRWAMAAA LAIYAFFHIAALNGLSIRDMTGGVVNLPFLPRLPMESWTYRTVHIAGATALGFLMFSG TSFSERTGTGRDRLFSYLAYALMIPALFSLGVTFWFQSLIAAGTSWNGMDPTIQFNER WLFGIPLIGATFGAIALSWVHQRPRTRVNPADLVLVVAALAVASYLVTIYNTPIRATT GTSFAPLGISLAGIAGTALILELTRRVTGLALPIIAGIFLIYVWLGHLAPGVLNSPQI ALQRFFSQVYTDVGILGQTTSVSSTYIILFIIFAAFLQASKVGEYFINFAFALTGRQR GGPAKVAIFASGLMGMINGTSAGNVVATGSLTIPLMHKVGYDKKTSGAIEAAASTGGQ IMPPIMGAGAFIMAEITGIPYQEIAIAAIIPSILYFASVYFMVDLSAARIGMTGMRAE ELPKVKAMMKQVFLFLPIIILIAALFAGYSVIRAGTYATAAAAVVSWLTPYRMGVRSV AYAFQIAGSMSIQIIAVCACAGIIVGVISLTGVGARFSNLLLGLAGVSQLLAMFFAMV IAILLGMGMPTTAAYAVAASVVAPGLIRLGIDPLTAHFFVFYFAVVSAITPPVALASY AAAGISGADPMATSFASFKIGLAAFIVPFMFFYNGALLMNAPWLEILQALTTALVGVY FLAAAVQAWLWGKAAGPLTRVGLLVASLFMISGGLLTDILGLGIAVGLILINRTFGPD SKTPLVQGRAD" gene complement(810723..812126) /locus_tag="SKA53_04128" CDS complement(810723..812126) /locus_tag="SKA53_04128" /note="COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit" /codon_start=1 /transl_table=11 /product="3-ketosteroid dehydrogenase, putative" /db_xref="CDD:10778" /translation="MAHPDIAAPLAEYDIDVGTLVIGAGAAGMIAALRAHEAGQDVLV IEADALPSGSTALSAGLIPAAGTQLQQQAGIADDARLFAQDIQKKAHGENAQALVDVL TQNAASVIDWLCHTHGLPFSVVTDFDYPGHARRRMHGLPSRSGEELVNALRGRIEHLG IPLICERRAVTLYAQGARMSGAQVMRPDGATETIGAQRIILACNGFGGNRAMVSRYMP EIDKGLWFGHDGNNGDAILWGEQLGAATQHLGAYQGHGNVAHPHGILITWAVITEGGF QVNKTGQRFWNEAQGYSEAARAVLGQDGGYAWSIFDARIANIARQFADFKNAESQGAV IWADTLDALDAKCGFAKGSLAHANATRPAQGQDTFGRTWSGQTLCGPFCAVKVTGALF HTQGGLDIDPETARVKTTSGALFENLYATGGAAVGVSGTSDSGYLSGNGLLAASVLGS IAGAGNSASVAICGQIP" gene complement(812113..812973) /locus_tag="SKA53_04133" CDS complement(812113..812973) /locus_tag="SKA53_04133" /note="COG2513 PEP phosphonomutase and related enzymes" /codon_start=1 /transl_table=11 /product="isocitrate lyase family protein" /db_xref="CDD:12108" /translation="MTLRARLSQPDILIAPGVYDGLTAAIATDAGFEALYLSGAAVAY TRLGRPDIGLSTASEMADTMALIADRTDLPVIMDADTGFGNALNARRTILTYERAGAA AVQVEDQTYPKRCGHLSDKSLISAAEMAGKIAAMADARRHDTLIIARTDAIAVEGIDA AIDRAGRYIDAGADVLFIEAPRNHAELGHIATTFKGQVPLLANMVEGGATPISSAQAL QDLGFDIVIFPGGIVRSLARTAHDYYRSLKDAGSNTPFADRMYDFDGLNAVLGTPDML AMGKRFDGTS" gene complement(812970..813572) /locus_tag="SKA53_04138" CDS complement(812970..813572) /locus_tag="SKA53_04138" /note="COG1335 Amidases related to nicotinamidase" /codon_start=1 /transl_table=11 /product="isochorismatase family protein" /db_xref="CDD:27793" /translation="MNPQRTALLTIDLQNDFLHPKGAYGRAGQTAEAITALPARIAPL RDALVAAGGIYISAQFTLVPGRDGAPLISAHLQKLRPFLTKGDFTPGSFGHDLVETLK PADFTIEKVAYSAFYQTRLEYILRAMQIETLIVGGIVTNGGVASTLRDAHLRDIHTVM LSDGCAAFNSDVHDATLVSLGTVTRILTCAQATAEIGAPQ" gene complement(813569..815641) /locus_tag="SKA53_04143" CDS complement(813569..815641) /locus_tag="SKA53_04143" /note="COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit" /codon_start=1 /transl_table=11 /product="hydantoin utilization protein A" /db_xref="CDD:10020" /translation="MTKTPTHKMIGVDVGGTFTDIFVLDEASGLAEVAKVPTSRPDQS AGFLSGIGARVDDLATVSVVVHGTTAGTNALLERKGAKIGVITTTGLRDVLEMRRRDR PRTWGLRGDFTPIVDRAHRLEVPERTLADGTIRVPVDLDAVRAAAQQLLDDGCIAVAV LFANAYANPENETLAVAAVRDIWPNAHVSCSSEILPEIREFERFSTTALNAYLQPEVS GYLARLETALKSSGFAGEFLIVQSNGGVMDVDTATRLPVRTALSGPAAGVVAAGYIAQ AAGFPDVITGDMGGTSFDVSLIAQGQSMLSQQTAIDFGMVVRSPMIEITTIGAGGGSI AWVDKGGLLNIGPESAGSTPGPVAYGQGNTRPTVTDANVVLGRIDPDNPIGGKLTRLD VDAAKAAIAEHVGKPLGLDALTAAEAILRVANSRMAGALRLVSVERGFDPKHFAFMPF GGGGALHAGAMLHEVGLARAIVPRYPGVTSAMGCVIADMRQDFVQTLNAMLDGIDIAA VTAHMQRHVTDGLAMLDASRTTFQARETSFTLDMAYLGQTHTVSVPLAVTVQDGVVIA STQAAIGDAFDAAYRATYGRLLAGGVRRVINLRSAVTGKRPRFDLSTLAPKDGSVAEA LRGTRQVYFGGQWHETQIYARLALPIGAVISGPAILEQPDTTVLIEPDLTGTVDQFGN TLIERKTP" gene complement(815638..817335) /locus_tag="SKA53_04148" CDS complement(815638..817335) /locus_tag="SKA53_04148" /note="COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit" /codon_start=1 /transl_table=11 /product="hydantoin utilization protein B, putative" /db_xref="CDD:3047" /translation="MTTDIDPITLAVLAGRMEQIADEMDATLFRAAFNPIIAEAHDAS HGLYHAVSGDTLVQGKSGLPIFVGVMSFAVKAVIDKAAENGDLADGDIYIFNDAHLGG THLSDMRLVRPYYYDGKLFCYLASVGHWHDVGGAVPGNYNPAATDAFQEAFILPPVRL AKAGVVQTDIIDILMRNTRLPQSAQGDLNGQLGALDLGVRRMDELLAEYGAATVRAAL DALQNSAETLMRAELTALPDGRWTATDYLDNDGITDTPLPITVTLEISGDTMTLDFEG TAPRCAGPVNIALPTAVATAYVAIKHIFPALPANAGVMRPITVKIPQGSLLSAPFPAP VGGYTETILRMIDVIFTAAAGAAPDRVVANAYGTINALSISGTRDNGKPWVMFSFYGG GHGGSLDGDGLNHGNAPISTATIPPMEILEAAYPVMFKQWALRPDSAGVGTHRGGLGA IYEIEVLEGNGAKAFLFGERGRHAPAGVAGGGDAALNVFHYEQDDGWHSPPMASKMVG IQLKKGQSVRLETPGGGGYGPASQRTPAAVARDVAAGLVSAEKADAAYGTAWREVTQ" gene complement(817332..817901) /locus_tag="SKA53_04153" CDS complement(817332..817901) /locus_tag="SKA53_04153" /note="COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog" /codon_start=1 /transl_table=11 /product="tautomerase, putative" /db_xref="CDD:15338" /translation="MPIIELHILEGYSDDDKTRLGQALTDAVRIVVPATPDAVTVMIH EMPRADYMRGRTHRTPAPAQPDQISIVRQFLTAMEMRDLDAARGFLGVDFTMTFPGNK QMHKLEDLVAWAAPRYRFVTKTYAGFEALQSADAHAVVYCHGTLSGEWPDGTAFAGIR FIDRFEVTNGLLTRQDVWNDISEHKAKTT" gene 818042..818857 /locus_tag="SKA53_04158" CDS 818042..818857 /locus_tag="SKA53_04158" /note="COG2188 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /db_xref="CDD:11896" /translation="MCAKPVDTAAKSLPEGGKARRVYLQLLDGITRGTYPDGAALPAE QRLCVELGVSRVTLRRALDALEAEGLIDRRAGAGTRVRTPQQKPKMSADFSTLMPQLV QMGHETTARLLSFSYGVPPAAVANAMRISPTALVQTATRLRLIDGQPFSHLTTYVPEH IARNYSESELATSPLFRLLERSGVEVETADQSVSATLAGPEVAGHLGLSVGAPLLTLN RVVRDAEGRGVEYLAALYRPDMFKLQMTLSRVGAGDARHWEPVVNPTRAEAAE" gene 818854..820236 /locus_tag="SKA53_04163" CDS 818854..820236 /locus_tag="SKA53_04163" /EC_number="4.2.1.33" /note="COG0065 3-isopropylmalate dehydratase large subunit" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase large subunit" /db_xref="CDD:28196" /translation="MTLARSLMDKLWDAHEVLRRADGTSLLWVDRHLVHEGSHHGFAK LAARNMALAAPELTFGVVDHYAPTRAGDVAPDIRRMIQTLGDNARAAGIRLFDLHDPE QGIVHVIGPEQGLTLPGLLINCGDSHTSTHGAFGALAFGVGATEVTHILATQTVWQKR PKTLQITFDGALGAGVTAKDMALHWIAALGADGAQGFAVEYAGAAVRALSMEGRMTLC NLSIEGGARMGMIAPDDVTFAYLKGRPFAPVGAAWDAAVADWRQLHSDGDAVFDRHVS IDASTIAPTVTWGTSPEDALPITGHVPRADGGKDIGATLDYMGLDAGMALTQIAIDQV FIGSCTNGRIEDLRMAAKVLAGRQAVVPGLVSPGSALVKKQAEDEGLAQIFVQAGLEW AGAGCSMCVGMNGDLVDAGKRCASSTNRNFKGRQGRGARTHLMSPAMVAAAALTGHLT DVRPLLEGRI" gene 820233..820820 /locus_tag="SKA53_04168" CDS 820233..820820 /locus_tag="SKA53_04168" /note="COG0066 3-isopropylmalate dehydratase small subunit" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase, small subunit" /db_xref="CDD:9941" /translation="MSGWQTLTGSAITLPEANIDTDQLIPARFMSQPRSAGYGGFLLY DARQANPDHPLDRYAAKVLVAGRNFGSGSSREAAVYALVDYGIRAVFAPSFGDIFAGN AVNNGLLTAQIDDDVAAFLVATMAGNAAAAQIDLGTGRATIAGQDIGFDLDPVRRQKL INGWDDIDMTAQYSDQITTFRAAHFAAHPWAMPAT" gene 820869..821867 /locus_tag="SKA53_04173" CDS 820869..821867 /locus_tag="SKA53_04173" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctP subunit, putative" /db_xref="CDD:8627" /translation="MKHTLFGGIFAATALASSVYAQETITAVHAFPESLIYTQSFLEF VEKLNVAGEGVIQIEVRGGPEAIGMFQQPDAVRSGVVDMVYTPGSFYAGALPEKDALV TSNRVASEVRENGGIALIDEIHQEKMGVKYLGWFDSGVCYNLWTREAPTLDAGGNLDV SGLKLRGNAVYNAFFTDYLGAQVIDLPTTEVYSALERGVVDATGWTQIGLIDLKWNEF LNYRIEPCFFSTDLGVIVNLEKWNSLSDEARTILQDVAIAHEAESAAKLGALRDSDFA ALDAAGMQVVTLEGEAAEAYLAAAVSSTWDRMKTLMAESPQGADNFDRLIELFYAN" gene 821922..822428 /locus_tag="SKA53_04178" CDS 821922..822428 /locus_tag="SKA53_04178" /note="COG3090 TRAP-type C4-dicarboxylate transport system, small permease component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctQ subunit, putative" /db_xref="CDD:9849" /translation="MNTVNKLYLWVLYTMAGIAGAMLVWLMISVVTSVVMRNLALQPF AWLFTSSEYAILYMTMLGAPWLVREKGHVHIELVTAALPAPTRRIVSRSVAAACVAVC ALLAWKGGELMLTNIAQNDLDVRAYYFPKWILTAAFPISFGLMAIEFGRFVFGTELMH SGEAGIHE" gene 822428..823735 /locus_tag="SKA53_04183" CDS 822428..823735 /locus_tag="SKA53_04183" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctM subunit" /db_xref="CDD:13807" /translation="MEWFEALGLLIGSILVLMAIGMPVALAFLAANIIGAWLFMGGAR GVTLMLNNGFGSLTNFALVPIPLFLLMGEIFFHTGLGARMFNAIDKLLGRLSGRLSYV TVLGGTAFSTLSGSSMGSTALLGSLMVPEMTARGYKKKMSIGPILGTGGLAIIIPPSA LAVLLATLARVDVGALLIAGIIPGLILACFYIATIYIQTKLDPDAAPAYDVETYSLGQ KLGLLFKDILPMLSVMVLIVFGMVGGLITPSEAAAFGALGVLLLAVVFRCLTWVALKR SIIGALRVSLMAYLIVFGSATFSQLLAFSGASSGLVRWATSFDLAPIAMLLVMFGVLL LLGMFMEQISMMLLTVPIFFPLALTLGFDPVWFALIILLALEISFTTPPFGLLLFVMK GVAPKDTTMREIYAAAFPYIGCSMLLVFLLILFPQLALWLPSL" gene complement(823745..824644) /locus_tag="SKA53_04188" CDS complement(823745..824644) /locus_tag="SKA53_04188" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="probable transcription regulator protein" /db_xref="CDD:10453" /translation="MANRSNHTPSIQELRALVYCSDLGSVSQAADALNLTQSAVSRSI RTLEDRLGVLLFHRVRKRLILSDAGRALVHDARDILAVLERSAKMAMAFGKGGDVLRL AVLPTFAATWLIPRLPSFLDAHPDVSIDLASTLHPIDFTDSPFDGAIQRAALARKDTD VAHLLDEQLIMVAAPRLVASGTILSTADLATYPLIQLATRPELWNDWFIGADATPIER TQGPRVQHFDMVISAAQAGLGIALLPTIFAEQALANGTLHKVHPRILQSNAYYALIRP KARAQSATMDAFATWLQALVQTT" gene 824738..825946 /locus_tag="SKA53_04193" CDS 824738..825946 /locus_tag="SKA53_04193" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="putative acyl-CoA dehydrogenase" /db_xref="CDD:27626" /translation="MSLKAKDAPDLNRFNWEDPFSFDAQLSEEERMMRDAAKAYAQDK LQPRVIAAYRDEQTDADIFREMGAMGLLGVTIPEEYGGLGGSYVSYGLVAREVERVDS GYRSMMSVQSSLVMYPIYAYGSEEQRQKYLPKLASGEWIGCFGLTEPDAGSDPSAMKT TAKKTATGYMISGAKMWISNSPIADVFVVWAKSEAHGGKIRGFVLEKGMKGLSAPKVG GKLSLRASITGEIVMDGVEVGEDALLPNVEGLKGPFGCLNRARYGISWGVLGAAEFCM HAARQYGLDRKQFGKPLAQTQLQQVKLANMLTEISLGLQASLRVGRLLDEAQAAPEMI SIIKRNNCGKALDIARMSRDMHGGNGISEEYQIMRHMVNLETVNTYEGTHDVHALIIG RAITGLQAFF" gene 825968..827065 /locus_tag="SKA53_04198" CDS 825968..827065 /locus_tag="SKA53_04198" /note="COG1804 Predicted acyl-CoA transferases/carnitine dehydratase" /codon_start=1 /transl_table=11 /product="Predicted acyl-CoA transferases/carnitine dehydratase" /db_xref="CDD:11514" /translation="MMSPLHGLKVVELARILAGPWIGQTLADLGAEVTKVESPGGDDT RTWGPPFVDQNGQQTAAYFYSCNRGKIGLRADLKTPEGIAAVKALVMDADIFIENFKV GGLAQYGLDYASLCALNPRLIYCSVTGFGQTGPLAHLPGYDFLLQGMSGLMSVTGAPD GPPQKVGVAVTDIVTGLYGTIGILAAVEQRHTTGKGQHIDMSLLDCATALLANQNMNY LVSGQSPTRMGNAHPNICPYDVFETADGHIILAVGNDGQFRRCCDVLGLGAIGQDPRF VTNQLRVKHRDDLLPILAKAALARQSGDLLTAFSAQNVPAGPINSVGDNLSSAHAKAR GLVVDPQGVKGVRTPIVFSDATLTLDRSVPE" gene complement(827162..830392) /locus_tag="SKA53_04203" CDS complement(827162..830392) /locus_tag="SKA53_04203" /note="COG2931 RTX toxins and related Ca2+-binding proteins" /codon_start=1 /transl_table=11 /product="VCBS" /translation="MRNDAKIYVTDTAISKAKVANNASAQARVHAVLKSNVVKKTAKG SSLAVSTLLLAACGEDDDASAQSGGASLIISRADGVYSATSVDGFVLPSAAVATLSVA DAANNAYSILLDADGAGILEFKFTDANDVVTLQAGSTIDDFGTLKVTSGTLDATLASI TGVTRVEVASGVKLTLVQVREIPVLVSNDVTGRIEIVVNSIAEATELATLVQNQTIQF FGAAGNITVTAAAGASVTTDQITAQMSIVTSNVRPASEAPAASSGETDTGAGVAAGAR PATDTGDAGSGAASGGGTGVTDGGGTADPGFRLIAQSSQVFKLAEGYGDVAMTMQDGV LRFTTAASNSVTAVNTDVSGIQVDGLTLTASADVLSSMAVTGAGHLIMTGLAEDTVVT GLGVTGVTTLAGVACADQIAQIAAGNANGTIVGTDLTAINGTAANVVQALAAFNTAPA AFTAELRDADGVAVTVTDLSAIGAATTGTVTVANAVVITGSESQVTAALVTDGTKVTA QAATIAVTGTTTAHGLNAIAAATSGVVTATITGTAAALNAADGGLTTLVTDAITITLD AGVAAATDLTGLAAKTRIAVDANEVTAISGTGAELVAVIAANIASESTLAINGNYTVT LTAGGAAATLAQLIAINNATSGMITLGANTTAGALSGSASDLTAALAGFAANTLSGDL DITGDAISIADFTLIGPATSGVVTYTLADGQQALGAQNLADVAGFVAIVAGSANFGST DVTVSLSDTAMTIAQITALVGTGLTLGNLSYTLADGQQALGAQDLADVAGLVAIVAGS ANFGSTDVTVSLSGTATTIAQITALVGTGLTLGNLSYTLAAGNVEQSVNGTFTGGAAS YIVTADAGNDTITGGSGTNIILAGAGNDTITSGTGDDIIMGGAGNDTITAGAGNDTIM GGADDDTITAGAGNDIITSGSGADTVTPGTGLDTIVYTDVANEARDIITNFTTIADGA AFGAGTDKLQFSAADLASVAGFVAYSAGGVSLDIDGDAAGSVLVAFVSGTGAQSATAA QAAFLFNQTTGDLSFDADGTGDGAAIVIATLTGVVDLATADFTFIA" gene 831326..831949 /locus_tag="SKA53_04208" CDS 831326..831949 /locus_tag="SKA53_04208" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTSASEQRNSVSDIVNISLAMVDDNQLKETLSKIAAATGEFIYY VPNTLPDALKTDEIFSFEDHANPKSDNRTYIEKIRLMISPTLNGVILISEETLLDLIH LRGIYAGLSKKVSDQQMNSLVDACHEQFPSWQIKVFSHRDFRVSPCFLIGNSFLVQEF FKYNIQIESVPTILGVQASLNTIHRLATDFLHWVEQNTLPQTDIQKV" gene complement(832725..832796) /locus_tag="SKA53_t05600" tRNA complement(832725..832796) /locus_tag="SKA53_t05600" /product="tRNA-Asn" gene complement(832855..833796) /locus_tag="SKA53_04213" CDS complement(832855..833796) /locus_tag="SKA53_04213" /note="COG0491 Zn-dependent hydrolases, including glyoxylases" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family protein" /db_xref="CDD:10362" /translation="MTQTAAEFAPQPGAVLALRDDLALVLAPNPSAMTGPGTNTYLLG HDRIVVIDPGPAIPAHLDAVLQAIGGRVVDHILVTHSHLDHSALAPALAAATGAAICG FGGPAAGRSAVMSMLAARGLTGGGEGIDPDFAPDRTLADGDGLHGDWGRITAIHTPGH IGNHLCFAWGDVLFSGDHVMGWASSLVSPPDGDLTDFMASCLKLQGVPATCLYPGHGA PVLDPQARLAWLIGHRLQREAQILAALAAGPATARDVTAFVYEDLSPLLAKAAERNVL AHLIDLHGKSIVAATPGICEGAVFHLHPGGLPPVTGI" gene 833838..835157 /locus_tag="SKA53_04218" CDS 833838..835157 /locus_tag="SKA53_04218" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="sensor histidine kinase" /db_xref="CDD:10512" /translation="MTFRWIKNAMPRGIYARAALILVFPVLFLQLLVSVVFIQRHFDG VTRLMTSAVNIDLQFLIDTANEAETAQQARAALAPLGLALQIRTALPATPPPDADINP FVDLTGATVIDTLRSGIDDLQVASLEDRGRVVLWVGTRHGLLEMDLSRRRMSASNPHQ LLVIMVVMGALMTVVAYIFLRNQLRPIKRMAQAAADYGKGRITPFTPTGAVEVRAAGM AFLDMRNRLERQTQSRTMMLSGVSHDLRTPLTRLRLGLSMLDEAEAADLLRDVDDMQK LLDAFLDFARDDAADNLEQVVPAAILREVLHDAARMGQNVGLAAIEGPERAINLRPLA IRRALDNLVGNALRYGNHALVGVSVTERAVRFWVEDDGPGIPPELHEDAVNPFVRLDP ARNQDKGSGVGLGLAIVSDVARSHGGVLRLGKSTVLGGLKAELVISR" gene 835254..836678 /locus_tag="SKA53_04223" CDS 835254..836678 /locus_tag="SKA53_04223" /note="COG2308 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11987" /translation="MDNDQAHFDEMLGATGARPPYAGYDAWFNAQDRARLAKKAAEAE AFFRRTGITFNVYGQSDAEERLIPFDLVPRIVSSSEWARLSRGIEQRVRAINAFLYDI YNRQEILKAGIVPIDLIAKNAAFLPQMMDFNPPGGVYTHIVGTDIVRTGENDFYVLED NARTPSGVSYMLENRETMLQMFPELFSKIKVKPVSDYPKSLRRSLEASAPSTCEGRPC VAVLTPGIHNSAYFEHSFLADQMGVELVEGHDLRVIDGHIAMRTTRGYRQIDVLYRRV DDDFLDPMTFNPSSMLGVPGIMDVYRAGNITIANAPGTGVADDKAIYSYMPEIVEFYT GERAILKNVETHRCSEPDALKYVLENLADLVVKEVHGSGGYGMLVGPAASKKEIMAFA AKLKSNPGNYIAQPTLSLSTVPIFTKKGLAPRHVDLRPFALVSPGGVNITPGGLTRVA LKAGSLVVNSSQGGGTKDTWILED" gene 836680..837621 /locus_tag="SKA53_04228" CDS 836680..837621 /locus_tag="SKA53_04228" /note="COG2307 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9727" /translation="MLGKTAGGLYWMFRFLERAENTARLIEAGFRIALTRSNDAESEW KSVIITSAAQQAFEARHDKYSSANVVNFLLRDPEHPSSVLSVTKSARDNARLVRTALT TEVWAAVNETWMVLTETLKRPIPETELPAVLATIRQQSALVRGALVGTMLRNDIFDFC RLGTFVERIDSTARIIDVKYYALLPAPSFVGSRMDNVQWETILRSVSAHRSFRWAVED DFTAPAIADFLILDDRMPRSLSHCAAQLVNNLGHLAKDYGEAMPSHALADRMNARLKD RDIGSIFDEGLHEFVGSILRENAAIGMQIEIDYRFNY" gene 837621..838418 /locus_tag="SKA53_04233" CDS 837621..838418 /locus_tag="SKA53_04233" /note="COG1305 Transglutaminase-like enzymes, putative cysteine proteases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11021" /translation="MQLTITHKTSYAYDMPVDFALQKLRLRPLSNPMQQVDDWQIDIS GGRIEASYLDHYGNHTDLVSVTPGATAVDITARGQVTTHDKAGVLGMVYGRAPLWHFA QPTPLTASGAGVRDFARSLGKMKDPLTSLHDLSNAIRDALPYRTGVTGADTSAEQAIK IGAGVCQDHAQIFIAALRTRGVAARYVSGYLMINDITDQDAAHAWAEAHVDGLGWVGF DISNGVAPDEKYVRVAIGPDASCAAPVKGMRKGPSSETLIVSLQVQQ" gene 838471..839181 /locus_tag="SKA53_04238" CDS 838471..839181 /locus_tag="SKA53_04238" /note="COG3484 Predicted proteasome-type protease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12812" /translation="MQLDHGLVFMSDTRTNAGVDNFSTSKKMFHWHVPGERMITIMTA GNLATTQAMVSLLRERSITTQDRDPSILREATMFQIARLVGATLKEVIAESSLSGQSA EQFAASAIVGGQIKGGLPTIFLIYPQGNFIEITPDTPFFQIGETKYGKPILVRAYDPA MSFEDAVKLLLVSFDSTVKSNLSVGLPFDLQIYEKDTFAQGRVIRIDEHDTVYQAISS GWGDALKEAFQHLPSYKV" gene complement(839207..841252) /locus_tag="SKA53_04243" CDS complement(839207..841252) /locus_tag="SKA53_04243" /note="COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family" /codon_start=1 /transl_table=11 /product="N-methylproline demethylase, putative" /db_xref="CDD:11611" /translation="MSTDPLLQPYQLKHLTLRNRIMTTSHEPAYPEDGMPKARYAAYH AERAKAGVALTMTAGSAAVSRDSPPVFNNILAYKDEVVPWIKNLTDACHDHGCAVMIQ LTHLGRRTGWAKGDWLPSVSSSRHREPAHRAFPKLAEDWDIARIITDFADAAERMQAG GMDGIELQVYGHLLDQFWSPLTNDLDGPYGGQSLDTRMQMLRDVLTACRKRVGDDFII GLRYTADEAAAGGITPEEGITISKRLAETGMVDFLNVIKGRIHTDPAMTDVIPVQGMK SAPHLDFAGAVKQATGLPTFHAARIPDVATARHAIQAGLLDMVGMTRAHMADPHILRK IMEGREDDIRPCVGATYCLDRIYQAGEALCIHNAATGRELTMPHDIAPAPVARKVVII GAGPAGLEAARVAAARGHAVTVFEAQPDPGGQIRLTAQNPRRREMIGIIDWRMAQCAA RDVTFHFNSWAEAEDVTALAPDVVIVATGGLPNTQLFEQKHDNPLVVSAWDIISGDVK PGQDVLIYDESGDHPGLMAAEVAANAGASVEVMTPDRTFAPDIMGMNLVPYMRALQDK DVTFTVTRRLLDVTRDGNRLRAVIGTDYSDFTKQKTYDQIVVNYGTMPLDDLYFALKP LSRNLGAVDQDALIAGRIQAVATNPDGAFQLFRIGDAVSARNIHAAIYDALRLVKDL" gene 841912..842838 /locus_tag="SKA53_04248" CDS 841912..842838 /locus_tag="SKA53_04248" /note="COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKLFIVGNGFDLNFGLPTKLADFGEYLQSNDQDVFYTLRDLHGL SAENGDASDLRQWNHLETRMANFDKKFIIDEAKYSFDRQEDYPPPSDDFWAYAPDHFE DMVNPIIHELPRLVREWACNIDISDTSGKSIEAYEKFGRRHQAAAFLTFNYTRVLEDI CQSKHIHHVHGEADAGDVVVGHSTEFVRHVVKPGDIDEVSDLYPGFETYNNHFRKRQD ELFKGVSDFASRLELDRRVDEVIVCGHSIGEADREYFLRVANLIPAATWTFTPHDGSG GQDHENIVRLTSNPNFLSSDYRLRSLTGVIGE" gene complement(843081..843632) /locus_tag="SKA53_04253" CDS complement(843081..843632) /locus_tag="SKA53_04253" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLGLGCKDSDGKQVRIEHRGKYTRASRSSGVDLRAEKKLGPINA TANTSEGIRLSSRVAQRTRVALHNGKFRLIGRWNAGPLGFNLSKTGVSASVKNSAGTF NFIKPKYSSFKIAGVQLRGKKAAQIQLVYMSMMAAVFLAAFGVRLLVFLAWMLWLPFA FVIDFLVGFFRGISSSQQVSKLS" gene complement(844265..846394) /locus_tag="SKA53_04258" CDS complement(844265..846394) /locus_tag="SKA53_04258" /note="COG1479 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12800" /translation="MNNQPKPDSKTYDDLIADVKKGIIKVPKFQRDFVWDLKATAKLL DSILKGYPIGTFILWETDQRINDIKNIGGFDLPETPLGRNVQYVLDGQQRITSLFAAY LGEKIRKSGEKKFTDYNDIVVNLEENLEEKEKDIVTVRDEAEIYIPLHDVLNFNWDMG EKLKEQGFSGGNISKINNYSSAFKTYAFSTVTLRQNDIESAIEVFTRINTGGKVLTLF EIMSAKTYDEANNFDMQARWEQFQKKLNDSKYENISPSVILQILSLIISETKECKRKT ILGLEKADILEKWDDAISAIEKTIDYFRTVLRIPVSQLLPYDTLIVPFAYFFLKTGKS PSGQQRKYLEELFWRSSLSLRYSSATESKLAADIKKVDLIIEGQRPPYQEFKLYINSP EDLRTTDFSTGNAICKSILCILAYHEPKDFDSNGKVLLDNSYLKIASSKNYHHFFPRA YVRKNGSDAETPYANSIVNITLVSAELNKKRIGAKAPSVYLEDFADENSELKHALKSH LIDLDDASIIQNDFTAFLKKRSEALHAEILKRIEPSEASTKIDPVHEMILQGEGQLVE FKSTLRYDMRTGEVNKKLEHVIAKTVAAFMNSEGGSLFIGVDDHGNAVGLDLDYGTLK KADRDGLQLHLGNILDSYLGKDVMKLWRLDWPLYDDKQLCHVQVTRASKPVYVTHEGK DEFFVRKEGSSQPLSRAEEYEWNKGRF" gene complement(846413..851827) /locus_tag="SKA53_04263" CDS complement(846413..851827) /locus_tag="SKA53_04263" /note="COG1112 Superfamily I DNA and RNA helicases and helicase subunits" /codon_start=1 /transl_table=11 /product="DNA helicase related protein" /db_xref="CDD:10834" /translation="MRRKLQDTSRRNPLINNVLNAKSASFLRIVDEKPQSIFDHVVVN ERKMVLAPLPPVDIDPPDEDTTEFKNAFFNAQSTDEAYLKVIEKIDFEYDEKALDKQE DADRALKDRVREALEMPPRPKSEQFSDLINHAESHGINPSSTLPLPSAASGDGRFDDN ELQTLLLPKTFQSRLSRILSKARMYQEERGLDVVYIVLGYLKWTLPNAEKLDEFKSPI LLLPVTLTKQKSSEGEIYSVTKLSDPLLNPSLDHKLTVEAKLDLARVKALVDTDHINV EELFEAIADLKPKNMQWVVQREASFGIYPFQGIELYHDLDTQRADFSEFPIVSELMVG KGQEPGTGTSGFSEEDVESQVGQSLVPHIVLDADSSQFISLLKVANNENVALEGPPGS GKSQTIVNAIANAIYSGKKVLFVAQKVTALEVVLSRLQSLGLHQFVLPLMGGHSSTDE FYEAVEERLAMQSSSSSRDLDNLKSQYENHRDTLSDYIDILTRPVTGTGMTVHQVLGV AVANSEVIRKLPLELQSIRIYPDRLVKDFGPSNIDAMASQVADWCARLEKSRISNSSP WADAPAETLDTDLVNKAMVDTGRASIEIQTALSKLDTLSKKLFEDFLNNPLNTIKNQI ECLAEDEDLIRAHDLSTDMGKDEAGRVLYDLVETNNKLTDLQSQLGLTAEKLPIVGKN KSKFVLLKDFVSEFKIQKINAGTIIATKDDLSERKSRLQKLQSFKAEIIDQISPGITI QQILAYEPLLKYREDLQTAKSHLREMGIEGARNELRKTKQLLRNRTQIFSVDELPSSR ELTGWQTAIQNAGIFYFMSSTYKSAMQEAGRILVTAKTKPAILSKLDEAQSFIKDWTS LELSNHVNIAAPSLSDNLSGLLSILDELEVINSRSGATLFSALQLLTLENLEDLIGLI RELEATSLSWSDISTDALSTNAQITKIQNSLNALTEAESVFVSLGNVSPIKLMVLISN SETIEKLLDKRAELIAELDPEFEDNGVAKKILEAHLDYAELSESVVSVLFNEEGELAF DTLAKLLPSFEKIQQSFHSLMHVKGKHVVAQSIGLRKSLEVLEQHRADQTGLNNLIAR RSVFAEAEKAGLENLVEKMEEAGVSEDYKGVAKGALAASLQDQIQHEFGSVLMQFDGT SLSAARSRIQSLDRKIIEISRYEIANNAIARAKPPYGNAYGKKSEYTELALLAHELQK QRRTPPRKILKRAQNALMELFPCWMMVPSAVAQHLPKNTDFDLVIIDEASQMTPENSI SALMRAKNAFIAGDTNQLPPTSFFKGLSVDEDEDEDVTTTEESILELANVQFHPKHRL RWHYRSKHEDLIAFSNHYVYDRQLVIFPSPTPTVHGMGISLVEVNGTFQRGVNPAEAQ VMLDAIVQFMKDTPNRSLGVAVMNQSQMEQLEALVLREADSNKTVSKYLDHWATARQG LERFFVKNLENVQGDERDVIFVGTVYGRDPLGKFYQRFGPINGPAGKRRLNVLFTRAK EQIVTFSSIPLGEFNPTPSNEGATLLRRWLEFSATKRLGEVAHNHDRAGHTDSPFEDH VIEAVRSLGYEAVPQVGVSSYFIDIGVKHPKYPLGYICGIECDGAAYHSSKSARDRDR LREEVLNRLGWELYRIWSTDWFRDPLGCREVLRGYLDDRLETVVKNMPKIVQPKPVEP RRIELPPRQPERRPVIGTAPNGSAPTATATITAPTRTEVRRAAPAPQTEADGIRIGTK LSIRYLNGPRAGVVAKFWFQKTTNDRKFEVNGYKSVGTDSPLGEALEGAQVDDIVTFA LRDEDIRVQVIEMTNASDNN" gene complement(851955..852518) /locus_tag="SKA53_04268" CDS complement(851955..852518) /locus_tag="SKA53_04268" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSEQITREVHEIVGQFFLDMGRTEYAMDEFVWMASRTHPEIMES FHYKHGEKRSSRPPMNAAERLDIACHFFKNITELSKLHDASGKIDVDEWFENLKRTKD FRNDLVHGNIDLTYTNDAGTFLRVHKYETPRSGVKGKIRRKVIALDSIRDAIEHIRYD RSAFRTALSEIESIEKSLISSQVNTYE" gene complement(852523..853275) /locus_tag="SKA53_04273" CDS complement(852523..853275) /locus_tag="SKA53_04273" /note="COG3440 Predicted restriction endonuclease" /codon_start=1 /transl_table=11 /product="Putative restriction endonuclease" /db_xref="CDD:12770" /translation="MMDLSLRNRLEKSALDQGFSISLGESDGWLVFQAHAVPTRLVLS GSDDGVFMVGTSHPGVGSELAEELEIAPQNHGGFDCFIAPSSGELFRIIGRIWALARS LPNEPLAEFERLMREAPSTTEVERLRKERIGQNVFRSALMTYWEKSCAVTGVQNPTLL RASHIIPWATCESDEERLNVHNGLLLVATLDAAFDAGLITFEDDGRILISGKLSEGDQ ISSGISSHMHLTRMNDEVRKRLAWHRMHLFEG" gene complement(853275..857621) /locus_tag="SKA53_04278" CDS complement(853275..857621) /locus_tag="SKA53_04278" /note="COG1002 Type II restriction enzyme, methylase subunits" /codon_start=1 /transl_table=11 /product="Putative type II DNA modification enzyme" /translation="MTKRRKQSRRSARLDFAAIEVVGGLLPSEVIAQIAAGDASEQSD ESYGVPKGLKLRDEIARYYQIAHAHWESFEVSRGSNASAPIGFVQSLLSECFGFKTLS KSSGKVISERQFPINFSAENGRIPLIIAPSSPAESRKPGIDEALSQFGDDTRKRSATQ LLQEYLNADEDALWGITCDGSILRILRDNASLTRPAWIEINLEKIFSEGLFPDFSALW LLLHASRFGGDGTSPSDCPLERWKERSRLDGAAAKDNLRLGVEAALIELGRGFIQHPN NTNLREKFQTGELKRQAFYEELLRLVYRLIFLFAAEDRDLLHAPNTPDNARKAYIGGY SLHRLRERCVRNGSLDKNIDAWEGMKSLFNALADGQSALGLVALGGLFEPEKLSNLTA CKVENKRFLKAIWHIAWFRPEGQPMTKVNWRDMQTEELGSVYESLLELTPELNLEARD FTFAEGDATKGNARKVSGSYYTPDSLVKLLLDTTLDPVLDAAESRNPNDPAAELLKLS IIDPACGSGHFLLGAARRAAARIAQHRMPGAISKEVFQHALREVVSSCIFGSDRNPMA VELCKVALWIEALEPGKPLSFLDARIKCGDSLIGIFDYEMLKAGIPDDAYSVMSGDDK AVAKAFERLNKDERDGKAASGFIRSLAAPAEIVDGARRIAAMPEETLQEVKSKARAFA RYEASDQWQRLKLACDMYVAAFFTPKVGEAPTARTLVDMPVPTTGAMWEAVSGKIRSD ILQENATTISEANSALHWPLAFPAVMARGGFDAVLGNPPWEVSQLNETEFFAAKDAAI AALPGDKRKRAITRLEAENPALWNEFQMSKRGFEANNTFIRASKRFEKTAVGKLNTYS LFAEHFSKLARRGTPLEKSPQSSLLQAIADTGGVREAPAGRAGMIVPTGIATDSSNSG FFGDLVSTKRLRAIIDFENREKLFPAVDSRMKFSILAIGPSDKADFAFFLQNTTMYEE KERRFTLSPDQIAAINPNTKTAPVFRSRADAELTAKLYSKAPVLIEERSDNPEGDINP WGISFQQGLFNMTTASDQFKNVEELEKIGFSRKGTDWEHPDSRLYVPLYEAKMIHHYD HRWATYEGEDEEQGVRDVTLEEKQDPNFEPTPRYWVPEDEVDMRASRVPTRLKTAFKK DDAEGCLKILAEWVLGSTPGLYPLNPVSSLRDIQEHLSNTLGSQATSSNVIGRSLQNW LSASAPRGMDMQRYTPLDHDDLAFIKDYGGRWLELAGDLIDRKKPRWLMGFRDISNST NERTMISSILPLSAVGHKLPLIFLPEGVQRTKVLLAGFSCLTFDFITRQKLGGTSMTY TYVKQFAFVQPYDFDVFDFDFIDPRILELTYTSHSMRPWAEDLGYTGAPFAFDPDRRA QLRAELDAFFAKKYGLTRDELRYVLDPHDIKGVDYPSETFRGLKNKEINQFGEYRTQR LVLEAFDKLTGH" gene complement(857641..860112) /locus_tag="SKA53_04283" CDS complement(857641..860112) /locus_tag="SKA53_04283" /note="COG0553 Superfamily II DNA/RNA helicases, SNF2 family" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase HepA" /db_xref="CDD:14813" /translation="MMALRQDVIRLLIADDVGIGKTIEAGLILREMLDRGEIDRFTVL CPPHLVEQWTGELESKFSIPATPVTASEAARLERNLPNTVSIFEAYPFTVVSMDFIKS ERRFFDFKRACPNMVVVDEAHSAVSAGRGRQRRYELVRSLADDPERNLLLLTATPHSG DETAFHNLLGLLDRDFAALQDASGDKQRQLRERLASHFIQRRRRDIDAWKEPGLFPQH ESSELKYRLTGEYEEFYGRILDYCAEVIESVEGETRKRLAFWGTLALMRCVGSSPAAA ARALKTRAQLDPTSVSESELTAQTLDDEELSENDLEPGIGIEDASLKSLIETADRLSG EVEKDPKFKALISALKDLLAKGHAPVIFCRYIATAEQIGAALQKFATKHTVEVITGSI PSEEREIRVEELGGHENRILVATDCLSEGINLQGWFDAVIHYDLSWNPTRHQQREGRI DRFGQKAPVVRSILMYGENNPVDGAVLEVIIRKAEAIAKQTGVRVPMPDDQGSLTKAL LSAVMLRARGHAQMTLDLDFSTSEEARQIEMAWVNASEQEKKTRTIFAQNSLKPEEVA VEWEATQTALGGYEDTERFVFQAMKRLGQPLEQLKSGAYKASLHLVPDHIKERFISES LIEDADIKPLKVGFSARPPIGTISVHRAHALPSVLAETFLEQALDEFADENALSTLPR LGAWETDAVEEVTWLALLRVRHRIDSRGKLGPKFAMAEESSAIAFSASSKQPLLWNVE AFALLDRDGENLDEASRRSQIERAINSLDSLQPALSQFARDRSEILARDHIRVRQALG SKGQVKVTAITPVDIIGFYVLMPGL" gene complement(860443..865716) /locus_tag="SKA53_04288" CDS complement(860443..865716) /locus_tag="SKA53_04288" /note="COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster" /codon_start=1 /transl_table=11 /product="Probable ATP-dependent helicase Lhr" /db_xref="CDD:10923" /translation="MDVFNLDHFVIEQYKAFSRSFTKIRSPEIASKVDALYDDKRFWP EPLLQINPHYASGGSIRDFVKGGILEPECLDIFTDKWGPANQEDPTLKLRKHQEQAIS FAKDRQSYVVTTGTGSGKSLCFFIPIIDAAIRAKKAGGGAKTRAIIVYPMNALANSQA KELEGYLGSATGGLVTYARYTGQESAEDRELIKANPPDILLTNFMMLELLMTRQSDLD RKVLQNCEGLQFIVLDELHTYRGRQGADVAMLMRRLRSRIGDPQNPPLCIGTSATMAS EGAQHEKNEAVARIAGQIFGADIGPDAVVTETLKRVTNPIKIGSSGLPGLKEAVQQAA QGEVAIGLKNSDFFDDPLAIWVETKIGLKNVETKPERAKPISLEDAANSLSQDSGLPA ELCASALRETLIGYSIPEKDRVAGSQEHSPLFAFKLHQFVAGAGRLYMTLRPEGHRDV TFSGQIFNPINDEERLYPTHFCRSCGQEFHPVTLRNYDGMEVFEKREIDDIPVDGDED DEGADWGFLMPQPNDDEFTFSGKDEDYPDAWLDEKPNGEKRLKPTYRKKRAQQYSVRP DGTAHSGMRQAWFLPGKYRFCPSCRDVNISSARDMNKLASLSAESRSSATTILLSTVL RWMNSPDSTIQKHSRKLLAFTDNRQDAALQAGHFNDFVFVTMLRGAIINALRQAPGGV LEEANIGQEVQRSLQFLAASEFSNRADEWLVNTGVKGERRNDAEAILRQNLQHLFWVD QRRGWRYTNPNLEQLGLLVARYKYLDDIASDEGEFVASPILSNASPEERKRALKAVYD HMRKGLAVDSGALNRLKLEELSGKNHNLIKSPWNIEEDRIVTSTIFMTDPPKRKEMKN KDEDKLLRGSPTSTIGRKIRDMTFAGRRIELKEVPEVMEGLLKASENYGSVVKEAGPF GGMGWRLAGSTVQFALDEAHENAELQNEYFVGVYLKIAEMLEAGGETLFGFEGREHTA QVEGDLRELREMRFRYGSDDRKSLIEAEEKLKNFKEDSRFLPTLFCSPTMELGVDISA MNVVYLRNAPPTAANYAQRSGRAGRSGQAALILTYCAAQSPHDQYFFERKTDLVDGVV VPPSIDLKNRDLVESHLNAEWLASLGMELKTDSIELDKNIKSNLDLTDPAKALLPEIR DVASAKRTAERASPLIDGVLKALEKDYAGDYPRWFKTRQQVTQNIVAQAPARFNETFN RWRDLLKAAERSIELADQALKDYTISPPERKAAEERRRMGEFQRSILLSNQSNKDNDF YLYRYLATEGFLPGYNFPRLPLMAYVQGGNDGRNQRYIQRARFLAISEFGPQSLVYHE GRAFRVDRALLKEAGDRDDGYLSTKARALCPSCGASHDGEHPERCHVCNTALSKSVPL TNLYKIENVGTRPAERITSNDEERKRQGFEIQTTFAFDASSYTASMAVTDDDGDIITV DYAQAAYISRINKGLRRRKDKSQIGFFINPKTGVWVGQPKDDGSDEERPDKLTQLIVP LVEDRKNALLIRFDEEWFAELGKESDKTLTTLQHALARGIEAVFQLEEGEILVEPTPS RQDRRALLFYEAAEGGAGALGQMISEKDSIALVARKALEIMHFEASSFDAAKKDVSAL VQKPQVECVAGCYRCVLSYFNQPDHEHIERRDEDMQKMLLRLAFSTTSPPQETRRDPA PMDGVSVTSAIMVPDDFVLPQGDNDPLIIAGQSIKLVWRKKRIVALDDEHITDELQSA LTAKGVTLFSLPPDPNQRAVVMDQLKAALKE" gene complement(865716..866594) /locus_tag="SKA53_04293" CDS complement(865716..866594) /locus_tag="SKA53_04293" /note="COG2378 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12050" /translation="MVGTRAASRRKTNWTVEQRYQFIEFRLYWSGHINRSDLMEVFGI SKQQASNDLASYIEGRKSNLSYDKSLRTYVRGKNFRPRFMQPDASEFFAQLQAVDQGL LEASRSWILPLPGYGAPPTPVRGVKPDVLRDVVLAIREHHGIHVLYQSFSRPDPALRW IEPHSLAFDGFRWHARAFCLNDNVFKDFLLSRILEVTGTQEPVSSPTDDSDWNTEVTL KIGPHPELSATQKYVIALDYGMNDGMSEITLRRAMLFYALKRLGLDTDPAARRPQDQQ IVLLNRDEVLGTKERI" gene 866718..867902 /locus_tag="SKA53_04298" CDS 866718..867902 /locus_tag="SKA53_04298" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGQQVKRLVAGTTQDLPITIHPLTAPLQLGFFLILVLLVSVFWS VPVRAQMPKDMQSDRASRCFLKIDGVIYDTGSCAMNDEDEGVIRFGQLDESPQSGYWV HIQKNDDGSFDASWNAEYGARHAHVSIGEVTYSKQGTADCWSNTHAMLCRNVLEHEPL YDIGYYPEREPSRVLLAYVDGVEHEIVHPAWDVLYPLQLAERLQLDGHEGMEQIVLLT HGGNCCPPSLSVVSYRGDGFFSFLDPEPIDGGWDGYDILLEGGRTVIRVKHSPYGYGN DQTQRSQDDYVVVDGALRLVTERIETSRAASVARLNLVDVIQAEGKRDTLAFDINNDG TTDTVACTYWERWGVLNCEAQISGVSEPISMQCKDVSISRFVSGLNRQHQLLCDREIV EY" gene complement(867912..868190) /locus_tag="SKA53_04303" CDS complement(867912..868190) /locus_tag="SKA53_04303" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAAPAVRDKLKMNTILASSALDDSLKSLDHLVAKSSDEPSASKV TVSLAGLRHIVLSGLLMKDHANEDQIGKMVIAGMVRGRDMFKNTKTAI" gene complement(868584..869225) /locus_tag="SKA53_04308" CDS complement(868584..869225) /locus_tag="SKA53_04308" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIDFIEPTAMPNDNDQHNDQRSGSSPANCQACEVEFTPKRSNQL YCSRCCQMNASRGNRSAANRKRTQKHYERASRLKQMIYSAPPNERLGVMKEILDAIPH DAGLRNILTDPELLREPPRPDNRMNLAKAAHAYVRKFFGLSIQPYIKAVMADGEPEGI PLHPRKAKSAKPPASGASNAWPTPVATNSIPAPRPGWFTLGYTPSVLWTPMRG" gene complement(869650..870231) /locus_tag="SKA53_04313" CDS complement(869650..870231) /locus_tag="SKA53_04313" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MEGWLMYGAALNEGREMFTGDREFGEWLAHNQLGFADQSNERAA AMWASGNLSEYRETRQAHPRVRTVRGLHAKFKDNDKAPKPVLEPTEDDLKTIGKLQTL AERGSTEGERESAKAKLEAYSSAFGDQKEEVIERAAEAAEREREEAPNDTQVQQIRTA LMRKGSDFLAEWLLKAMVKDHDLFKSVMVGLYK" gene complement(870366..870878) /locus_tag="SKA53_04318" CDS complement(870366..870878) /locus_tag="SKA53_04318" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNLKDMPLEQLGANAYGHYKAGQKAEGKAAEQYTSSGLYLKEAK EQLNTLQNPRAPMNFAEFLLNHCPIGKSRAYDIIAIADGRKSPVEEAERHRSYREERE EPRNSARAETQSETASPQPQPKPRAPCVVKEAEDINAKYLGVHLRVIRLHLNSATEDQ LKQIRNILNV" gene complement(871190..871921) /locus_tag="SKA53_04323" CDS complement(871190..871921) /locus_tag="SKA53_04323" /note="COG1961 Site-specific recombinases, DNA invertase Pin homologs" /codon_start=1 /transl_table=11 /product="RECOMBINASE" /db_xref="CDD:11669" /translation="MGSDMTSKATSSASSPATSNHQTKTILYARVSTTEQTIGHQEAQ ARAAGFNIDLVVSDAGVSGVAVPLAERPQGKRLFDLLRRGDTLLVRWVDRLGRNYQDV TDTIREFMRRGVIIKTVINGLTFDGATTDAMSEAVRDALIGFMAAMAQAQAEATREAQ RAGIEHAKADQAKYRGRKPSFTRDQLEATECLLAREMGASAIAREIGLSRATVIRIKS DLPAAYATLERWSAGQGRMATQVGS" gene complement(873304..873897) /locus_tag="SKA53_04328" CDS complement(873304..873897) /locus_tag="SKA53_04328" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNNMEKRKELTQKRNWSGIFELNGVKIDSFGTKKELSVLGDYLQ KDEVVFALVSGVMSQSVTSNDFDFGANTWIAALTSERVLCLDHAMMSSSVDTQSIRLN RIQGVSASQGWIFGKVTIDIGARLIVIDNCEKSHVKIFADLANQLIRQKDDEAASPSV SNLSIADEISKLNDLYIKGVFTADEFSKAKAKLIDKL" gene complement(874151..875512) /locus_tag="SKA53_04333" CDS complement(874151..875512) /locus_tag="SKA53_04333" /note="COG4974 Site-specific recombinase XerD" /codon_start=1 /transl_table=11 /product="putative integrase/resolvase recombinase protein" /db_xref="CDD:27725" /translation="MSEYPATTLSMNKGKWYVYLTIPQDLRVHFGDRKQLKRSTGTSD ERDAKRRQHGIATELYGQLDACKPDIRDIISHLLGYIGEADEVQRMEDEGHLEGLIQY NKNLEYVEDPENDLATDVVNEQGAKALEVYREWKAKTAKGHVAADAVLLSVAVREYLE THPYGPAKTTRDCELSLSQFQDFTGDMVLTDLTAVLIHQYADHLGATKSRKTIAKKIS YVKRLFDHAVRKGWVPQNVFVGIVLDKKVGRAKESYRPFTSSELEAIFKQSMPDHQRK LLTILITTGMRLDEAALLDWEDIKEEQGVVYYDLSDKLVKNKGSQRRVPVHSSLSWVT SGRTSEATTGKVGQMFPEFTRDKDGKAQASASKALMPLIRRVTDDKAKVVHSLRGNFK DMLRDAGVSKEVNDFITGHASGDVAGNYGSGPSLKVRKDALESLSFSHINLANCPLGD VEQ" gene complement(875592..875678) /locus_tag="SKA53_t05598" tRNA complement(875592..875678) /locus_tag="SKA53_t05598" /product="tRNA-Ser" gene 875696..876661 /locus_tag="SKA53_04338" CDS 875696..876661 /locus_tag="SKA53_04338" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MCHAAQRKGQNALTKNCVGFAAKIVFVGADTFHALKGPAMFRRL FLSLVAALGFTGAITGAITGAALAQTSDADALFDLVGLPQIVAIMRDEGLDYGETIAR DMFPAGMTPRWAAQLDRIYATDTMVAQMRRAFVAALDGQDVSGALDFYGSDLGRRIVT LEIAARAAMLDPTIDATSKEFAVEQAQADTPRYRLISDFIVANDLIEANVVGGLNSNF AFIDALVSGGATLPGVTADSLLADVWAQEDAIRASTAEWITAFLLLAYAPLEDAEIAE LTSFSQTPAGRIMTQAVFTAFDEIFVLVARDLGSAASGFIISQDL" gene 876726..877133 /locus_tag="SKA53_04343" CDS 876726..877133 /locus_tag="SKA53_04343" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQIKLIAACILGLLAGCAGQGVLVSGDPSLPTGDPRQERLVFSE CAIYFAAVQTLRADGRRPSGNPTRGCPAKAAARPADINPMVSVPSVSPGFPQELYSRM IARGVPSDLADDIARSKAFWDLVALRDSVISGF" gene complement(877130..877465) /locus_tag="SKA53_04348" CDS complement(877130..877465) /locus_tag="SKA53_04348" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRPALILPLLLAACTTDPTNPGQPVFAPLAALSDPAQAQNRGQV EIIVKSNYDAIRRDIIAGGGPALIAAMDAAGVPYQDRPTRMIQLQSNSRLYAANPSAL ITALLIYGS" gene 877644..878282 /locus_tag="SKA53_04353" CDS 877644..878282 /locus_tag="SKA53_04353" /note="COG0261 Ribosomal protein L21" /codon_start=1 /transl_table=11 /product="ribosomal protein L21" /db_xref="CDD:25629" /translation="MFAVLKTGGKQYKVASGDVLRVEKLAAKAGDKIQFNEILMVGST VGAPLVAGAGVQADVIDQIKGEKTINYVKRRRKHGSQRKKGHRQQLTLVRIADILETG ADTSGVMAAVSGAGIKMVITPRVNPKGIAKPKAGAAPKAAAAATGGDDLKKLSGVGPA LEKKLHAAGVTSYAQIAAWSEDDVAAFDEKLSFKGRIAREGWVAQAAELSKA" gene 878405..878563 /locus_tag="SKA53_04358" CDS 878405..878563 /locus_tag="SKA53_04358" /note="COG0211 Ribosomal protein L27" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L27" /db_xref="CDD:7866" /translation="MRQRGTKMWPGMGVGMGKDHTIFATAEGAVKFHKGLKGRTFISV LPVAEAAE" gene 878689..879231 /locus_tag="SKA53_04363" CDS 878689..879231 /locus_tag="SKA53_04363" /note="COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins" /codon_start=1 /transl_table=11 /product="Putative acetyltransferase" /db_xref="CDD:11381" /translation="MIHEEITVQQTIQSDRFLLRPCRKSDAGLIAMYASDDRVARGTR SVPHPLPPGTVEAMIERALLSDRTEDVWIIDGSANAHAEALGLISLERMDRAQSEIFY WIAPAFWNTGYASEAVRALIAANPHQSERIFAEVFQDNPGSARVLTNCGFDYLGDAEA FSVSRGATVPTWTYTLKTGA" gene 879305..880348 /locus_tag="SKA53_04368" CDS 879305..880348 /locus_tag="SKA53_04368" /note="COG0536 Predicted GTPase" /codon_start=1 /transl_table=11 /product="GTP-binding protein, GTP1/OBG family" /db_xref="CDD:10407" /translation="MKFLDLAKVYIRSGAGGAGCISFRREKFIEYGGPDGGDGGDGGD VIVEAVDGLNTLIDFRYQQHFFAGSGQHGMGSQRTGKDGEDKILRVPVGTEIIDEDEE TVIADLTEIGQRVIIAKGGNGGWGNLHFKTATNQAPRRANPGQEAIERTIWLRLKLIA DVGLLGMPNAGKSTFLAATSNARPKVADYPFTTLVPNLGVVGVDDVEFVVADIPGLIA GASEGRGLGDMFLGHVERCAVLLHLIDGTSGDPAGDLVTIIHELEQYGGELADKPRIT VLNKIDALDAEERAFLRDELAEVATGPVMLMSGVSREGITEVLRALRGEIDDNRLRHR VAEAATDDPEWRP" gene 880336..881442 /locus_tag="SKA53_04373" CDS 880336..881442 /locus_tag="SKA53_04373" /EC_number="2.7.2.11" /note="COG0263 Glutamate 5-kinase" /codon_start=1 /transl_table=11 /product="gamma-glutamyl kinase" /db_xref="CDD:10138" /translation="MAALNDAKRLVVKIGSALLVDAATGALRQDWLTSLAADVAQIKA RGADVILVSSGSIALGRGVLGLPQAALALEQSQAAAAVGQIRLARAYEQALAPHGIIA GQVLVTLEDSQDRRRYLNSRATMETMLGFGVVPIVNENDTIATDEIRYGDNDRLAAQV AVTIGADQLVLLSDVDGLYTGNPKIDSAAQHLVIVDKITPEIENMAGDVGSTLSKGGM ITKIMAAKIATDGGCAMAIALGTGLHPLAALAQGARSTWFTAQVDPQAARKRWIAAMK PRGTVTVDDGAGKALLSGKSLLPAGVTGIIGSFGRGEVITISDAAGAPLGQGLTRYTS AEARQIMGRRSTEIAAILGYEGRAALVHRDDMVL" gene 881452..882708 /locus_tag="SKA53_04378" CDS 881452..882708 /locus_tag="SKA53_04378" /note="COG0014 Gamma-glutamyl phosphate reductase" /codon_start=1 /transl_table=11 /product="Gamma-glutamyl phosphate reductase GPR" /db_xref="CDD:9890" /translation="MTDIQTLMAKIGVDARAAAIVLATTGSERKHAALIGAADAICAN VMQILDANAEDQVYGAQKGLSPAMMDRLVLTEPRIRAMAEGLRNVAAQHDPVGAVIAE WDMPSGLHIRRVRTPLGVVGVIYESRPNVTADAGALCLQSGNAVILRGGSESFHSSTA IHKCLQTGLQQAGLPATAIQLVPTRDRAAVSAMLTATDHIDVIVPRGGKGLVGLVQRE ARVPVFAHLEGICHIYVGAHADPAMALEIVLNAKTRRTGICGAMECLLIDWRFYTQHG SLLIDALIKAGVEVRADGDLAKIKGTTIAQPDDFGHEFLDMICAAKLVDGVDAAIAHI REFGSNHTDAIITEDAQAAAHFFAQLDSAILMHNASTQFADGGEFGMGAEIGIATGKM HARGPVGAEQLTSFKYLVSGNGAVRG" gene complement(882806..883396) /locus_tag="SKA53_04383" CDS complement(882806..883396) /locus_tag="SKA53_04383" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14472" /translation="MRPDLATLVGSRICHDLISPIGAIGNGLELLALTDGNPGAEMNL IADSVQNANARIRFYRIAYGAASTEQMLGSADVLSFISVLARGGRFTYFWQVAEDRPR REVRCALLLLQCFEAAMPVGGDIHVSVIDGRWVLSAECLRFNIDPCLWDRLATGDTAF TYSAAQVQFALLPCMLQEAGRALKVKMSSDRIVVSF" gene 883426..883608 /locus_tag="SKA53_04388" CDS 883426..883608 /locus_tag="SKA53_04388" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTGINAILEPGMLVRHPAQPDWGIGQVQSNIAGRITVNFREAGK IVIEGHHISLEIVTDN" gene 883701..884516 /locus_tag="SKA53_04393" CDS 883701..884516 /locus_tag="SKA53_04393" /note="COG3176 Putative hemolysin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12514" /translation="MNEMQDPPPDLETGHRMPPHFAVSIAQNICDVQAAQRLRYLVFV SELGGDGPLVDHDAQLEQDRFDAHAVHLLLRDTTRAENDQVVGVYRLLTEKAAVAAGR FYCESEYDLSRLKTSGLRLLELGRSCLHPDYRGGMAMMHLWQALAAYVQAQKIDVLFG VASFHGTDLKHLGGPLSLLFHRHLAPEPFLVQAKGAGAVDFAPLPADQIDRVAAMRDT PPLIKAYLRIGGVVGQGVYVDHAFNTTDVCLILPTACISTRQKQIYSRPLSDG" gene 884509..885327 /locus_tag="SKA53_04398" CDS 884509..885327 /locus_tag="SKA53_04398" /note="COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase" /codon_start=1 /transl_table=11 /product="acyltransferase, putative" /db_xref="CDD:10079" /translation="MVETWQGTPPPDHPPLGLRDWMRVLRRGAPLALLVFGGLLVLVL IRLVEKPFFGQRRPVTPFVTQAVCRAAFVLLGIGYHTQGTPMRGPGAVVANHVSWLDI FALNARKRIYFVSKSEVARWPGIGWLARATGTVFIRRDRRDALSQIALFRNRLQAGHK LLFFPEGTSTDGLQVLPFKPTLFAAFLDPALRADLQMQPVTLRYCAPTGADARFYGWW GDMGFGPHLLRTLAAKQQGRVRVIYHLPVQVRDYTDRKMLARALEDRVRAGLAG" gene complement(885387..886013) /locus_tag="SKA53_04403" CDS complement(885387..886013) /locus_tag="SKA53_04403" /note="COG0352 Thiamine monophosphate synthase" /codon_start=1 /transl_table=11 /product="putative thiamine-phosphate pyrophosphorylase" /db_xref="CDD:10226" /translation="MSDAADTPQIYLITPSDFDLTSFPDRLAACLDSNDIGCVRLALA TKDDSKIARAADALRAVTHARDVALVIESHVLMVDRLGLDGVHLLDAARSVNKIRKDL GDDAIIGAFCGNSRHDGMTAGELGADYVSFGPVGASALGDGRTADLELFTWWSEMIEV PVVAEGALDAALIRLLTPHTDFFGFGDEIWREDDAAAALGTLLKAMTS" gene 886140..886880 /locus_tag="SKA53_04408" CDS 886140..886880 /locus_tag="SKA53_04408" /note="COG0565 rRNA methylase" /codon_start=1 /transl_table=11 /product="RNA methyltransferase, TrmH family, group 1" /db_xref="CDD:10436" /translation="MPMTNPQPAFVLIRPQMGENIGAAARGMWNFGLDRMRVIAPRDG WPNQRAVAMASGAGRLLDEAQLFEDTAAAIADCDFVYATTARPRGLTKPVLSPEAAMQ DAYARIAAGGKVAVMFGPERAGMENDDIARANAIISVPVNPDFPSLNLAQCVLLLGYE WRRVTGEVVALRHDAPGDWATQLEVEKLADHYQDRLDEAGFFFPDHKAANMQMNLRNL WSRLPLTRADVQMLHGILRQMVRWKERG" gene 886959..888095 /locus_tag="SKA53_04413" CDS 886959..888095 /locus_tag="SKA53_04413" /note="COG1612 Uncharacterized protein required for cytochrome oxidase assembly" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase assembly protein" /db_xref="CDD:11325" /translation="MSTKRSIFQEVGDSPKQAVTPGGIARAGQGARLAIRAWLMALFA LVVIMIAVGGLTRLTDSGLSITEWAPVTGALPPLSAQAWEAEFDKYRQIPQYQLMNRG MSMDEFKFIYYWEWGHRQLGRFIGLVWALGFVYFLLRRQIPAGWTGRLLLLGALGGLQ GAIGWWMVASGLQEGMLSVASYRLATHLGLAFVIFGFISWYVYLLGRPAADLLQARRS GDARLVKWGGVLVGLAFVQILLGALVAGIDAGRAFPDWPLMAGGFFPPEPFGLDPVWR NFFEDAGLVQFMHRMAGYVLFAGALVIWWIARASANRAIRAAFNMMMAVMALQVVLGI TTVIYSAPVHLAISHQFLAVILWATILRARFMARYPKPQSVRTA" gene 888095..889564 /locus_tag="SKA53_04418" CDS 888095..889564 /locus_tag="SKA53_04418" /note="COG2317 Zn-dependent carboxypeptidase" /codon_start=1 /transl_table=11 /product="thermostable carboxypeptidase" /db_xref="CDD:11996" /translation="MAAYTDLMAFQRDTEALAQVAGRLGWDQETMMPGGAGPQRAEEH GAMASILHARRTDPRVGDWLEAAEAGDDVAAANLRHIRRSFDRATKVPARLATELAQA TSRAHRIWAKARAEEDVAAFLPMLQQVLDLRREEAAAIAGNADPYDALLDDYEPGATG ASLSAMFAALRPRLVALRAAVLDRPKPATLSGLFDEAGQLALSTKLALAFGYDLQTGR IDKAVHPFSSGSGLDVRITTRTNPADPFNCFYSTIHEVGHAAYEQGIDRAHLLTPLGA GASMGVHESQSRIYENQLGRSRAFTGWLYGQMRDTFGDFGIADEEAFYACVNRVSDGF IRTEADELQYNLHVLLRFDLERALVAGDLAVSDLEAAWNDRFVADFGFAVDLPSNGVL QDVHWSEGLFGYFPTYTLGNVYAGCLHQALRAAVPDLDDDLARGDTSRATGWLRANLQ QFGGLRTPVETITHAAGFAPHEGPLLEYLETKFSGIYGL" gene complement(889630..890430) /locus_tag="SKA53_04423" CDS complement(889630..890430) /locus_tag="SKA53_04423" /EC_number="4.2.1.17" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /db_xref="CDD:10752" /translation="MTKDKPMDILLRQDRDHIAHLTLNAPDRLNALSDAMLAALQGAL DQIADDTAIRAVIIAGNGKAFCAGHDLREMQAGRQAGDGGAAYFADLFARCAAVMQRI QSMPQPVIAQVHGIATAAGCQLVATCDLAIAADDTRFGVNGVNIGLFCSTPMVALTRN IPRKAAFEMLTTGRFIHTDEATRLGLINRAVPATDLADETHNLAQTIAAKLPVAVKIG KSAFYDQAQLSTAEAYAYTSAVMVENMMVRDTDEGISAFLEKRAPDWS" gene 890473..890892 /locus_tag="SKA53_04428" CDS 890473..890892 /locus_tag="SKA53_04428" /note="COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism" /codon_start=1 /transl_table=11 /product="thioesterase family protein" /db_xref="CDD:11758" /translation="MTLKMDAIALHGFLDKEFAQVRGDFIIADLAPDRISVQMQVADR HLRPGGTVSGPAMFALADVTAYLIVLANIGPKALAVTTNCSIDFMRKPAAGQMLVCEA RLLKLGRALAVVDALIYSAGQAAPVARASLTYAIPPT" gene complement(890940..891167) /locus_tag="SKA53_04433" CDS complement(890940..891167) /locus_tag="SKA53_04433" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSYTIQPMQIAVLTNQSHVPVLAGLALRFAVMVTTWDLRRRTRA HLRDLPPHLLPDIGLDHPAAMAEVSKPFWRA" gene 891255..892679 /locus_tag="SKA53_04438" CDS 891255..892679 /locus_tag="SKA53_04438" /note="COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /db_xref="CDD:10886" /translation="MIVSDTIFKSPLGLAGKSKFKALAQAIREAILSGQLAPEAKLPP VRDLAYQIGVTPGTVARAYQLLTEEGRLIAAVGRGTFVAPAQRSLRPASPAILAADDR LSHAADVAHLLSPKMPDMGQGQMIRDALHHLAETMPTEHLLRYPDRQTDLAARRAVAA YLGVERVGAFTVDDIVTAHGGQSAVVMILQTILHGARPVVAVDALSYGGFRYAAAMCR ADVVGVPWDAEGPDPAAFEALIKAQSVQVFCTSSEVCNPTVRHTTPARRTQIARIAQR YGVHVLDDDCCRLMRSAHIGPSYRALLPDLGWHVVSPAKSISAALRIGFALPPQGWTS ALVRTATFSSFGVTRLMTDLYAHILAQPGIDAVLDAVRDRIAQDIRAAVNVLGMYKLS WSEDVPFVWLELPLGWRSGEFLQAADAAGVLIKSADDFALRDGRSVHAVRIAVNGLVP HQTFVDAMHVLRDLLAHPPQRISV" gene 892831..893292 /locus_tag="SKA53_04443" CDS 892831..893292 /locus_tag="SKA53_04443" /note="COG0102 Ribosomal protein L13" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L13" /db_xref="CDD:24440" /translation="MKTFTATPADIDKKWILIDAEGVVLGRLASIIAMRLRGKHKPSF TPHMDMGDNVIVINAEKIQMTGNKRDERYYWHTGHPGGIKSKTKAEILEGKHPERVIE KAVQRMLPGGKLSRQQMTHLRIFAGAEHGMEAQKPEVLDVKSMNPKNTRTA" gene 893292..893783 /locus_tag="SKA53_04448" CDS 893292..893783 /locus_tag="SKA53_04448" /note="COG0103 Ribosomal protein S9" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S9" /db_xref="CDD:24415" /translation="MADQVNSLEELGQVAEGVEAVVAPVAAPREPVRDALGRSYATGK RKDAVARVWIRPGSGKVTVNGKEMKTYFARPVLQMILAQPFSIAGVAGQFDVVATVKG GGLSGQAGAVKHGVSKALQLYDPSLRPALKAAGFLTRDSRVVERKKYGKAKARKSFQF SKR" gene 894058..895425 /locus_tag="SKA53_04453" CDS 894058..895425 /locus_tag="SKA53_04453" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="site-specific recombinase, phage integrase family" /db_xref="CDD:27723" /translation="MRLKIGGRKGYVTRSTKLTIYEDAYEYAKSELLRLQQAAKLGHS LDEYTFEQHWQNWFERNVKNGTWTASRQYWHDKYAARYFKQYFKNKDGTSMLLNDITP SVASGYWDWRIGFWDSAEGKALQKFNPKRRDAKTRGTNNVRKAPATKTLMMEQSALNQ IFFDAFERGRLQQVFKMRAPAKNRTPARRAGFDAEEYGTLTRYLRSYRDCVGVFADKR LNTWHKIQRQQMYYFVLFLANSGLRVGEAREMLWSDIKFDVAVDGSDSVIAEVRVSKD TKKGEARFVQTQPNANNLLTRWRDATPYNKHNDLVWFGQVDAETREVNKFVDLNRGFQ IFLRRVPYNERVDGLLYDRDGDKRSLYSLRHTYATLRLEKGDVSIYDLAMNMGCKVAQ IENHYSHVLTQQRRHEITKTKRKTAAVVEDVVDAENGFALEALKRFRRGELSEAALFE IMKLP" gene 895656..896333 /locus_tag="SKA53_04458" CDS 895656..896333 /locus_tag="SKA53_04458" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MERDTDKYKRNFERLYDKWNEIKAKDVKSQRAYSEIITSKYRSF LDFDEIGTKAHVLYADAFSWKSDEELWELYESIRLYDALSCELDDEWRLHGTGIYKNE LEHLHTYCKKLSDTKLIAHLYKAREQFDLLRKFNVEENNEGEWRYQTQDYKFKRVADF TESRWGVYVKNMDRYGMWGLFVDEQRAYTSFYAADKDFNEGYLDCLHMRIYVDAREYR GVEKETF" gene complement(896376..896636) /locus_tag="SKA53_04463" CDS complement(896376..896636) /locus_tag="SKA53_04463" /note="COG0609 ABC-type Fe3+-siderophore transport system, permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQNSWQTLLSWCKLNYYAAEQNMNIDEIFALFFMAFIWLIAPSI IIHYKGRRWWAWLPIALFLPGAFLIIAIFMHGANKDGKNTIS" gene complement(897463..898014) /locus_tag="SKA53_04468" CDS complement(897463..898014) /locus_tag="SKA53_04468" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRNYNANDIQTFFDAHAHLAQFYIVAHTNICPARLSAQTLHTRV QTAKQDLRHTLNVLATTLHPNQPNCVRRKPHLYRPLALTTIEAVNTAQAAALTTHFNI ILGNIPKHFRQAETIDGIFRNTWTNCRQSEDVQTQAITGSSKGLNFYVLKEAHYDKQK IVGDISTWDIDNTFIPHAAVYAD" gene 898091..898420 /locus_tag="SKA53_04473" CDS 898091..898420 /locus_tag="SKA53_04473" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTKTVLDEIKNALMATNAVQGEQEFCVAWLGKNASYMRVLRFQQ LQPSADALAVCASKLNYYTQRLERSSDSKHKQWAQRFAVLHSKCTTALNEQARTKWQA AERMGAV" gene 899375..899569 /locus_tag="SKA53_04478" CDS 899375..899569 /locus_tag="SKA53_04478" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MATMIADEARDIDGVKVKTVQPKRAKQLPTLPILNSANTPKPTQ TAPTQQDFEPIQAIKPIAPK" gene 900440..901312 /locus_tag="SKA53_04483" CDS 900440..901312 /locus_tag="SKA53_04483" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="ABC spermidine/putrescine transporter, inner membrane subunit" /db_xref="CDD:10894" /translation="MFNKLTSSEGGRGLLLISPPFFYALLLMAFPLGAIILFSFWTQD FMDVDTTFTLNNYRQIIEQPIYGALLQRSLFVSAVVTMVTVLLAFPIAYFVSFHVRPD RKSLWLFLITIPFWTSYLIRVFLWKVILGYNGVINTGLLNIGLIDEPLTFILYNINAV IITLAHAFAPFAILPIFVALEKIDRSLLEASRDLGENKVMTFFRVTLPLAMPGVVAAV LIVFIPTIGDYVTPELMGGAGGKLIANMIQTQFLALNNAPLGAALAVVAMLSVTAISL VFILLNRRWLRGRS" gene 901309..902109 /locus_tag="SKA53_04488" CDS 901309..902109 /locus_tag="SKA53_04488" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=1 /transl_table=11 /product="ABC spermidine/putrescine transporter, inner membrane subunit" /db_xref="CDD:10895" /translation="MSLRIYAIAYLVFLYAPIVLLPIFAFNDATIIAFPLSGFTTDWF GELMTNRSLHTAVKNSLFIAVMTAVLSTLLGICAARAGAMYHFPVKAGIMGFIMLPLV LPEIIVAVSLLVVVVQIFDMGLSNWTIIAAHVLICTPFCIAILNGAFQNLDPSLEEAA MDLGESRFSAFRLVTLPLVMPGIISSMLIAFTISLDEFIIAFFLSGTSQTMPVYIWGL MRFPASLPVVMALGTIMVALSIILLTIAELLRRRGMARAGVKDKGGFL" gene 902115..903191 /locus_tag="SKA53_04493" CDS 902115..903191 /locus_tag="SKA53_04493" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="ABC spermidine/putrescine transporter, ATPase subunit" /db_xref="CDD:13158" /translation="MITLKGVNKYYGDYHALRDIDLTINTGEFFSLLGPSGCGKTTLL RTIAGLEDVSDGVVMIGGKDMRGVSANLRPTNMVFQSYAIFPHLSVAENVAFGLRKRT DLNKDDKAKMVEDALAMVGLSGYGKRASHALSGGQRQRVALARALILKPKVLLLDEPL SALDKKMREQMQVELIRLQRHVGITFILVTHDQEEALVMSDRIAVMFEGEIGQLADPE TLYRRPNSRRVAEFIGKMNFLRADVLQVGDTIDVDVAGLGRVSVNAEQAPMALHKGAA VAGVRPETLAILFAGETTERKLIDGVVDEVVYYGDMTYYDVRIAGVDQPLNIAMKNLI GRPVLDVGTRTKVVWDERSLVILA" gene complement(903267..903782) /locus_tag="SKA53_04498" CDS complement(903267..903782) /locus_tag="SKA53_04498" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDGTFAIIFFITGLTDTYLNECPTGCYQLQEAPARAALQISDVV FQDDSISEEIYVTYDLARRYGVFQPVIGASATSDGSLWVGAGAKWTTQKVIDGPFFVE ASFMPGLYAQGDGPDLGLPLEFRSALGVGYSFDNGATLSVLADHRSNGDLKDLNPGLE TLGLRFAMVLD" gene complement(903792..904409) /locus_tag="SKA53_04503" CDS complement(903792..904409) /locus_tag="SKA53_04503" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /db_xref="CDD:11025" /translation="MTKRGYHHGNLRAALIDGCLRLIEIRGPTGFTLSEAAREAGVTP AAVYRHFAGREDLIAAAAQEGYAIFADLMDHAFADGQPSALAAFGATGRAYLAFARRY PGHYIAMFESGVSINHSPELHAVATRAMGVLEKAAAALSQHIPADKRPPAQMFSAHVW AMSHGVVELFARGNPGRTSPFPPDDLLETGIGIYLRGLGLLDPDT" gene complement(904402..905271) /locus_tag="SKA53_04508" CDS complement(904402..905271) /locus_tag="SKA53_04508" /note="COG2326 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="polyphosphate kinase 2, putative" /db_xref="CDD:8903" /translation="MERPFDGAISRYFNQDAPQAIRDLIKGRAKDGILNPHFPYDSRY DKDDYTDAMNRLQVELVRMQAWVRDTGQRVVVVFEGRDASGKGGTIKRFRENLNPRGA RLVALPKPSDHEAAQWYFQRYVAHLPAKGEITLFDRSWYNRGVVEHVFGFCTPEQRAC WFAQLPQFEHMLANEGIILFKIWLNIGRATQLQRFLDREQDPLKQWKLSRIDVDGLAL WDAYSDAIRETLDRTHLTFAPWTVVRGDDKLRARINVIRSILHQLDYKRKDVDALGVM DPKIAGGPDLWHD" gene complement(905318..906307) /locus_tag="SKA53_04513" CDS complement(905318..906307) /locus_tag="SKA53_04513" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="Predicted hydrolases or acyltransferases (alpha/beta hydrolase)" /db_xref="CDD:10466" /translation="MALKAITLGAFALGLGAVLTTGIAALRADRITAAFPPVGNFVEV TGGRVHYVQAGQGPDVILLHGAGGNLRDFTFSLMDHLTDRYRVTAFDRPGMGYTDRVP GIATGAFVTEGDSPAAQVAMLREAAGALGITAPIVVGHSFGGIVALAWATTGLDRVDP TNASAVVSYGGVAMPWPGDLGSYYMVNGSALGGVVIPLISAFTPKSKVDDVVATTFAP QAPPAGYIAHLGGELALRPGAFRANVRQVNTLRPFVVEMAELYPQITIPIEIIHGTAD TVVPIHVHAEELIKIAPTANLVRLEGIGHQPHHSRQPEAIAAIDRAAARAGLR" gene complement(906297..907214) /locus_tag="SKA53_04518" CDS complement(906297..907214) /locus_tag="SKA53_04518" /EC_number="2.3.1.46" /note="COG1897 Homoserine trans-succinylase" /codon_start=1 /transl_table=11 /product="homoserine O-succinyltransferase" /db_xref="CDD:11606" /translation="MPIKLPSALPAYDVLSKEGVMVLDEVTAARQDIRPLRIALLNLM PKKIQTENQFARLIGATPLQIEFSLIRMSEHQTRNTAAEHMEEFYKPFSDVRDEKFDG LIITGAPIEHLPFHDVTYWDELTQVFDWTQTHVHSTFGVCWGGMAMINYFHGVEKHLL DQKLFGCLHHHTTAAGSPYLRGFSDDCVIPVSRWTEMRQDEIDAVAGLKTLITSAEAG PALVEDAAHRALYIFNHFEYDTTTLKQEYDRDIANGTPINVPVNYYPGDDPLQAPQNR WRSHAHLLYGNWINEIYQTTYFDLDKIGT" gene complement(907251..908114) /locus_tag="SKA53_04523" CDS complement(907251..908114) /locus_tag="SKA53_04523" /note="COG1223 Predicted ATPase (AAA+ superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIYTSASDWRAAPQKRVLFFAMSGLGKTYLSSMLRQTGDWFHYS IDYRIGTRYMGEYIADNAKREAMKVPFLRDLLRSDSIYIGSNISFNDLRPMSSYLGKP GDPAKGGLPWDEYTRRQDQFQRAEVAALHDTGHFITRSHDLYQYPHFVCDTGGSICEW VDVTDPNDPIMTDLASKTLMVWIEGTDAHTAELIRRFDREPKPMSYDPVFLLATWTAY LAEFNAAPDDVDPDDFIRWAFAKALAHRQPRYKAMADRWGITVAQDDVAQVKDAAGFI DMIAQALEKRG" gene 908239..908586 /locus_tag="SKA53_04528" CDS 908239..908586 /locus_tag="SKA53_04528" /note="COG0607 Rhodanese-related sulfurtransferase" /codon_start=1 /transl_table=11 /product="rhodanese domain protein" /db_xref="CDD:27909" /translation="MQYTSKFQAMADAARAQTDEVPASAVDSLIAAGAVALDIRDKEE HDVDHIAGSVHVSRGKLEMNIETVLPDLETTILCYCNANNRGALSAASLKAMGYKNAK FIAGGLKAYRGAR" gene complement(908678..909817) /locus_tag="SKA53_04533" CDS complement(908678..909817) /locus_tag="SKA53_04533" /note="COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain" /codon_start=1 /transl_table=11 /product="tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase" /db_xref="CDD:28422" /translation="MPLESPINSLGFAKAPADTRVVVAMSGGVDSSVVAAKLAEEGYD VVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAEEMGFPHYVLDYENTFREAVMDEF ADSYLGGATPVPCIRCNERVKFKDLLQTARDLDADCMATGHYIQRKMGVQGAELHSAA DAAKDQSYFLFSTTQDQLDYLRFPLGHHKSKDETRALAAKYGLSVADKPDSQDICFVP NGDYAAVIEKLRPGAASPGTIVDINGQVLGQHNGVIHYTVGQRRGLGIGGLADPLYVV RLDVDKKQVIVGPKDMLATRRVPLREINWIGGGKLTDIAERQIAVRVRSTRPPTDAIL RPISDTEAEVELLVAEQGVSPGQACVFYDTDSTRVLGGGWIWRGQ" gene 909947..910225 /locus_tag="SKA53_04538" CDS 909947..910225 /locus_tag="SKA53_04538" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MYLRKIEGRRAVTLPDGSTMTRADLPDKTTSRWVASRKAAVVRA VMHGLITRTEALETYDLSEEEMAAWEAAVTAHGEVALKATALQRYRQP" gene 910313..911026 /locus_tag="SKA53_04543" CDS 910313..911026 /locus_tag="SKA53_04543" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator CtrA" /db_xref="CDD:10613" /translation="MRVLLVEDDPTTAKSIELMLTHANLNVYTTDLGEEGIDLAKLYD YDLILLDLNLPDINGHEVLRQLRLSRIDTPILILTGDDGTESKLKSFGFGADDYLTKP FHREELVARIHAIIRRSKGHAQSIIRTGQIAVNLDAKTVEVAGNTVHLTGKEYQMLEL LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLSEAADGENNIETVWGRG YVLRDPESVKPAAKLAIGA" gene 911111..913279 /locus_tag="SKA53_04548" CDS 911111..913279 /locus_tag="SKA53_04548" /note="COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)" /codon_start=1 /transl_table=11 /product="DNA ligase" /db_xref="CDD:10147" /translation="MTRVKWGQVVSTSKQDHDTATIAVADLTRAEAMVELARLAQTLA QANTAYHRNDTPEISDAAYDALKQRNAAIEARFRELKRADSPSDQVGAVVADGFGKVQ HAVRMLSLGNAFSDDDVTDFDERLRKYLGLTADQPLRYTAEPKIDGLSLSLRYEDGVL VQAATRGDGAVGENVTANACTIADIPQRLTGAPAVLEVRGEVYMSHDDFAALNARQAD KGAKTFANPRNAAAGSLRQLDAGITAARPLRFFAYAWGALSAPLAATQSGAIARLAEL GFATNPLTATCDSPADLIAIYSGIEAQRASLGYDIDGVVYKVDDLALQQRLGFRSTTP RWAIAHKFPAELAWTVLDAIDIQVGRTGALSPVARLVPVTVGGVVVSNATLHNEDYIA GRGGDGQPIRQGRDIRVGDWVQVYRAGDVIPKIKDVDSARRPAGATPYIFPDTCPECG SPAIRDPGDAVRRCTGGMICPAQAVERLKHFVSRAAFDIEGLGAKQVEQFHADGWITT PVDIFTLRARYGQGLQQLKNREGWGAKSADNLFAAIDDKRAIALNRLIYALGIRHVGE SSAALLANHYGSWAGFATAMQAAHIGQGPAWDALTSIDGVGAVMATSLITTLQNPSEA ASIAALVAQLDVQDAPKIASDSPVSGLTVVFTGTLEKMTRAEAKARAESLGAKVAGSV SAKTDILVAGPGAGSKAAKAEALGIRTMDEDGWLALIGSA" gene 913276..915366 /locus_tag="SKA53_04553" CDS 913276..915366 /locus_tag="SKA53_04553" /note="COG1200 RecG-like helicase" /codon_start=1 /transl_table=11 /product="Haem peroxidase" /db_xref="CDD:10918" /translation="MTGRPEALFPLFGTLTRLDGVGAKTAQVMSDAGIAKPADLLLTL PVSGVDRRRRASIREVIAPCIVTVEVTVGLHLPPKTKGKPYRITVQDAETSFQLVFFH LRGDYLQKLLPTGQRRVVSGKLELFDGIAQIVHPDHVLPPLDADTIPAFEPVYPLHAG LTQKVMWKATRSALALLPDLADWIDPAQKAREGWPDWAQALHLAHNPQSPVDLSPHHP ARARLAYDELMAHQITLALARANARRAKGVASAGDGQLQKRVLGALPYSPTGAQTRAI AEIGADLAAPLRMNRLLQGDVGSGKTLVAMMALLQVVESDGQGVMMAPTEILARQHYA GLEPLAAAAGVRLDVLTGRDKGRDRAAKLAALAQGDIQILVGTHAVFQKDVHFHDLRL AVIDEQHRFGVAQRMELGAKGRAVDVLVMTATPIPRSLALAQYGDMDVSVLDEKPPGR KPVQTALVSAARMDEIVAKLRAAVADGRQAYWVCPLVEESEIIEMTAAEDRFKRLRAA LGDTVVGLVHGQMPVTEKDAAMARFVSGDTRVLVATTVIEVGVNVPNASIMMIEGAES FGLAQLHQLRGRVGRGAAASTCLLIYQPPLSENGRKRLEILRETEDGFRISEEDLAMR GAGDVIGTAQSGLPRFRIADLERQAGLMAVAQSDARKLLHDDPDLQTPRGQAARALLW LLEQDRAIRLISIG" gene 915480..915602 /locus_tag="SKA53_04558" CDS 915480..915602 /locus_tag="SKA53_04558" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKEITTILIRSRHTLIGDALGIVALMVLLFVGLALPGPI" gene complement(915757..916203) /locus_tag="SKA53_04563" CDS complement(915757..916203) /locus_tag="SKA53_04563" /note="COG0822 NifU homolog involved in Fe-S cluster formation" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10689" /translation="MSAETDMIKLYSARILALAADMPRNARLSAPTASAKKRAPLCGS NVTVDIVLQDGVITDFGQDVKACALGQAAAAVVGGAIVGLTEQQVQAGRDALQAMLTS GGPVPPAPFDGLEVLEPARDYKNRHASIMLAFDATLDALQTAKART" gene 916271..916648 /locus_tag="SKA53_04568" CDS 916271..916648 /locus_tag="SKA53_04568" /note="COG0139 Phosphoribosyl-AMP cyclohydrolase" /codon_start=1 /transl_table=11 /product="phosphoribosyl-AMP cyclohydrolase" /db_xref="CDD:16978" /translation="MPFDLTTLKYNDAGLIPAIAQDAASGEVLMMAWMNAESVARTLD TGRVTYWSRSRQAFWVKGDTSGHVQELVDFRVDCDCDCVLVTVNQTGPACHTGRRSCF YTAVRAGDAVELMQPMGSTPPSA" gene complement(916620..917477) /locus_tag="SKA53_04573" CDS complement(916620..917477) /locus_tag="SKA53_04573" /note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases" /codon_start=1 /transl_table=11 /product="glutamyl-/ glutaminyl-tRNA synthetase" /db_xref="CDD:9884" /translation="MITRFAPSPTGPLHLGHAYSAILAHDMARAVGGTFLLRIEDIDQ TRARPAWEVQIYDDLAWLGLTWDGPVLRQSDRMGVYDNVIDGLWQRGHLYVCTCTRRD IQAALSAPQEGCNVGPDGLIYPGTCKAQRRLRREYWQQSESGMPARDAVLRFDLDTLS SDLIMFENNGLNVEVTRQDLQRDVGDFVIGRKESGTSYHLSVVIDDAVQGVTDVVRGA DLAEATQIHAALQALLGLPTPRYHHHDLIRDAAGKRLAKRDDAKAIATFRAEGASPAD IRRMVGLIP" gene complement(917474..918835) /locus_tag="SKA53_04578" CDS complement(917474..918835) /locus_tag="SKA53_04578" /note="COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation" /codon_start=1 /transl_table=11 /product="glucose-inhibited division protein A" /db_xref="CDD:10924" /translation="MAMEQHLHIIGGGMAGSEAAWQAANAGIKVVIHEMRPKVGTFAH RTGNLGEMVCSNSFRSDDHEQNAVGLLHWEMRAAGGLIMDMAEKHRLPAGGALAVDRD PFAESVTAALTAHPNISVSYDEITTLPKDGHWIIATGPLTSGALAAAIAAETGTEALA FFDAIAPIVYHETVNMDVAWMQSRYDKGETVEEQTAYLNCPMTKAQYEDFIDALLAAD KTEFKEGETAGYFDGCLPIEVMAERGRETLRFGPMKPVGLTNAHDPGNKPYAVVQLRR DNALGTLYNIVGFQTKMKYGAQKTVFAMIPGLETAEFARLGGIHRNTFINSPSLLDDQ MRLRSRPNIRFAGQITGVEGYVESAAMGLLAGRMAAAELQGRSLSPVPVTTAMGALVS HITGGAEAKTFQPMNVNFGLFPPLDGVKGGRRGRKDRYKAYTDRAKADWQDWLVPQAL AAE" gene complement(918915..921641) /locus_tag="SKA53_04583" CDS complement(918915..921641) /locus_tag="SKA53_04583" /note="COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit A" /db_xref="CDD:10063" /translation="MNDTPETPENDDDLPVTRMAHAGPSVTIEHELKTSYLDYAMSVI VSRAIPDLRDGLKPVHRRILYGMYEAGNTHDKSYRKSARSVGDVMGKYHPHGDSAIYD ALVRMAQDFSMSLPLLDGQGNFGSMDGDRAAAMRYTEVRMDKPAAYMLMDIDKDTVDF QDNYDGKDREPTVLPARFPNMLVNGAGGIAVGMATNIPPHNLGEVIDATLALIDNPDL TSEEMIEFIPAPDFPTGGLILGRSGARKAYLEGRGSVIVRAKTVVEEIRKDRYAIVIN EIPYQVNKSVMIDRIAEAARDKRIEGIAHVQDESDRNGVRVVVELKRDATAEVVLNQL FRFTPMQTYFGCNMLALNGGKPEQLTLRAFLVAFVDFREEVIARRTAFELRKARERAH ILCGLAVAVTNIDEVVATIRGSADAADARHTLMTRRWPAAAILEYIKLIDDPTHTAND DGTYNLSEAQARAILELRLQRLTQIGVKEVTDELQELAGKIREYLEILGSRDRILQII RDELTEVRDQFAVPRRTQIVDWSGDMDDEDLIEQEDMVVTVTSGGYIKRTALADFRAQ RRGGKGLSSMATKEEDVVTTLFVANTHTQLLFFTTDGMAYKLKTWRLPLGSRTAKGKA IVNILPIPQGVSVAAIMPVDRPEAEWDDLQIVFATSAGDVRRNALSDFTNVKSNGKIA MKLPDEHTLLVNARICSPDDDVMLITDSGRAIRFPTTDVRVFKGRDSTGVRGIRLQGD DKVVSMSIIRHFEAEAEERAAYLKMRRAMAGLADDAEVEDEEAAPGQISPERYAAMSA AENLILTISAKGSGKLSSSHDYPVRGRGGMGVAAMDKAMRGGPLVTSFPVEMSDQIML VTSTGQSIRVPVEGISFRSRSAGGVKVFDTGKGETVVSVAWIADQGDDEDDA" gene complement(921744..922787) /locus_tag="SKA53_04588" CDS complement(921744..922787) /locus_tag="SKA53_04588" /EC_number="4.3.1.12" /note="COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog" /codon_start=1 /transl_table=11 /product="ornithine cyclodeaminase" /db_xref="CDD:8296" /translation="MLKASSRALVPFVSVDNMMRLVHHIGVETFIADLARNITEDFAK WDQFDKTPRVGSHSDVGVIELMPTSDGVLYGFKYVNGHPKNMGEGLQTVTAFGVLSDV YSGYPRLLTEMTLLTALRTAAMTAVATKHLAAPGASTMAMIGNGAQSEFQCLAVKAVC GISHVRLYDLDPAATAKCARNLEGLGLQVTQCTTPEEAIEGAQVITTATADKDMQTIL TDNMVGAGVHINAIGGDCPGKTELHRDIVARSSIFVEYPPQTRIEGEIQQMPADHPVT ELWQVITGQTQGRKSAAEVTLFDGVGFAIEDFSALRYVHDRIKDTPYYVDLDLIADPD DPRDLFGMLKRAR" gene complement(922787..923716) /locus_tag="SKA53_04593" CDS complement(922787..923716) /locus_tag="SKA53_04593" /note="COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family" /codon_start=1 /transl_table=11 /product="arginase" /db_xref="CDD:24430" /translation="MTQKHCILIGAPVDCGKRRRGCLMGPDAYRTAGLAEAITALGHS VHDWGNLAPAQVEVAEARNPLVWKLAENVGWTQTLMEAAQKAAPQGFPIFMGGDHALA AGTVAGMAAHAQAAGRPFFALWLDAHSDIHTPDTTDSGNLHGTPVGYVTGRRGFDAFP PLPVRVEPANICMIGLRSVDTAEHEILARGDVELVDMRRIDEEGISAPLQAFLDRVAA VDGMLHVSLDVDFLDPSVAPAVGTTVPGGATVREGHLVMEMLSDSGLVTSLDLVELNP FLDDRGKTANLMVDLTASLLGRRVFDRPTRSYK" gene 923802..924221 /locus_tag="SKA53_04598" CDS 923802..924221 /locus_tag="SKA53_04598" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family" /db_xref="CDD:11236" /translation="MDETDSAIIRALRQNGRASLSELASIVGVTRTTLRTRLDRLIAG GEIAGFTVLTRSDVRPDAVRGLMMLEIAGRAGEKVMKRLTAMSEVIVVHSTNGTWDLI AEIGTKSLEDFDQALFAIRRMDGVTRSETSLLLSSRR" gene complement(924178..924309) /locus_tag="SKA53_04603" CDS complement(924178..924309) /locus_tag="SKA53_04603" /note="COG1495 Disulfide bond formation protein DsbB" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MCDQVTWELLSLSMASWNAVLSFGLMAIWISAVMIAKGSSRTA" gene 924227..924301 /locus_tag="SKA53_04608" CDS 924227..924301 /locus_tag="SKA53_04608" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAIRPKDSTAFQLAIDSDSNSHVT" gene complement(924651..925229) /locus_tag="SKA53_04613" CDS complement(924651..925229) /locus_tag="SKA53_04613" /note="COG1238 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="DedA family protein" /db_xref="CDD:10956" /translation="MLRGLYDGTVALARTRYALWALGLVAFVESSFFPIPPDVLMIPM IIARPSRAFVIAAVATLCSVLGGLFGYYIGFALYETIGVQILQFYSKEAYFTEFAVTY NSYGAWAVLVAGVTPFPYKVITIASGVTQLSLPMFIAASIVARALRFFLMAALLWKYG APIRDFIERRLGLMFALFCGLLIGGFAVLGVM" gene 925338..925420 /locus_tag="SKA53_t05590" tRNA 925338..925420 /locus_tag="SKA53_t05590" /product="tRNA-Leu" gene 925570..926394 /locus_tag="SKA53_04618" CDS 925570..926394 /locus_tag="SKA53_04618" /codon_start=1 /transl_table=11 /product="type I secretion target repeat protein" /db_xref="CDD:25308" /translation="MVLCNQAHVAPHGKEREIVAGFLTVPSEHANRYGRCDLLNLTGP QVKKIAFKPKNPDASRVTYGCGTTLTYAQIAQVIPCFTPGTRIATPKGEKLVENLKIG DRVVTRDNGIRHITWAGQKTMQMQDLQISATMRPVLIRAGALGQGLPERDMIVSPNHR VLVVSDMAKRHFAESEVLIAAKHLTQMKGITPIDLPKATYIHFMCETHEIVLSDGAWT ESFQPGDDTLQGIDADQREELFLLFPELATKEGLRRYRAARKTLQQTEAGLITATG" gene complement(926391..926981) /locus_tag="SKA53_04623" CDS complement(926391..926981) /locus_tag="SKA53_04623" /note="COG2068 Uncharacterized MobA-related protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11776" /translation="MIPILILAAGASRRMRGQDKLLQVVDGMPLLRRQVVMAQATGHP VCVVLPAADHPRAAVINDLDAPLLVAQNAAQGMSASMRDAVAQLPDCAAFMILLGDLV ALSTADLQQVLTARQLHPDYLIWRGATADGKPGHPVIFDARLRGQFADLAGDGGAETI VQAHQGQTCMVPLPDQRARLDLDTPEQWDAWRRSAL" gene complement(926978..929386) /locus_tag="SKA53_04628" CDS complement(926978..929386) /locus_tag="SKA53_04628" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="aminomethyl transferase family protein" /db_xref="CDD:10278" /translation="MKTTTRAVIIGGGVVGCSVLYHLTKLGWSDVMLLERSELTSGST WHAAGGFHTLNGDTNMAALQGYTIRLYRELEAITGMSCGLHHVGGVTLADNQDRFDML VAERAKHRYMGLDTEIIGPAEIAKIAPITNLDGIIGGLYDPLDGHLDPSGTTHAYARA AKMGGATIELHCKVIATTPRPDGTWDVVTDKGTIHAEHVVNAAGLWAREVAAMAGSYV PLHPMEHQYIVTDDLPEIYERDSEHPHVMDPAGESYLRQEGRGLCIGFYEQPCKPWAV DGTPWDFGHELLPDNLDKIEESIAFAYSRFPVLERAGVKSVIHGPFTFAPDGNPLVGP VPGLRNYWSACGVMAGFSQGGGVGLMLAQWMITGECERDVSALDIARYGRWITPGYTR PKVVENYQNRFSVSYPNQELPAARPHRTTPMYDIFTDLGAVWGHQFGLEVANYFARAG DPPYETPTFRRSDAFAATAREVAAVRGGVGINELQNFGKFSVTGSGARAWLDRIMAGR IPQPGRMSLTPMLSPKGRLWGDFTVSCLAEDDFQLTASYGAQDIHHRWFMQNESPDAR VENISDTRTGFQIAGPKARDVLAACTRDDVAGIRFMDVRRITVGQVACIVQRVSYTGD LGYEIYCDPTDQRQLWWTLWQAGQPYGIAPFGMRAMMSLRLDRFFGSWGREFSPDYTA AETGMDRFISFKKTSDFIGRALAEAERATPPDRMLVTFVVDADDADVVAYEPVFIAGQ VQGFCTSGGYAHHTGTSIAFALVPRAAATDDTVVEIEIMGQRRPARRITTPLFDPDGQ VMRG" gene complement(929471..929989) /locus_tag="SKA53_04633" CDS complement(929471..929989) /locus_tag="SKA53_04633" /note="COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component" /codon_start=1 /transl_table=11 /product="twin-arginine translocation pathway signal sequence domain protein,putative" /db_xref="CDD:12279" /translation="MAAGSLAACNNGIGSSAGATIDARVDATLEQMYTEFPGTRDLAS RASGLLVMPLVTNAGFGFGGSFGRGALRVGQSTVDYYSATTGSAGLQIGAQQFSSVLF FMTPDALLEFRQAPGWAAGASIDYAFSNQSDMLRAETTTSLSPVIAVVFGQTGLRVGA TLEGSKYTRIIP" gene complement(930176..931174) /locus_tag="SKA53_04638" CDS complement(930176..931174) /locus_tag="SKA53_04638" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24241" /translation="MRDATGAVAIVIKVSTDVTQRNDAFIEIAKGLDALSGGDLTYRL PHFGLSDVDDIGTAFNKASIRLADILRNVSQIAQQVRTITGDLEHASSELSSRTTAQA ATLEQTAAALEELTTTVRSSTKRLTDAEDLATQTAAGARKSDAVVQRAIDAMSQIANS SSEISKIIAVIDDIAFQTNLLALNAGVEAARAGDAGRGFAVVASEVRGLAHRAQDAAG EIKSLISRSATQVTNGVDLVNNTGDELKNIVKSIGTISETMGAISESARQQSNALAEL NVGVGHLDVVTQQNAGMVDQLAQSNTSLVGNVGALIDQMSQLNASESDKTPMRRAG" gene complement(931190..931441) /locus_tag="SKA53_04643" CDS complement(931190..931441) /locus_tag="SKA53_04643" /note="COG2202 FOG: PAS/PAC domain" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein McpD" /db_xref="CDD:5369" /translation="MIDQTQAVIRFGLDGTIISANENFCKTLEYPLAEIQGKHHRMFV DPSYAKSAEYRDFWDRLGRGEPFTDRFQRRCKSGRMIWI" gene complement(931563..932561) /locus_tag="SKA53_04648" CDS complement(931563..932561) /locus_tag="SKA53_04648" /EC_number="4.2.1.24" /note="COG0113 Delta-aminolevulinic acid dehydratase" /codon_start=1 /transl_table=11 /product="delta-aminolevulinic acid dehydratase" /db_xref="CDD:25525" /translation="MTPITPAFPITRLRRMRRTPALRALARQHTLTVDDLIWPVFVME GRDDETPVTSMPGVMRRTVDRIAKAAVEAQALGIPAICIFPYTGMEARTTDCAMAWDA NNLTNQAIRAIKDAAPDIAVMTDIALDPYNINGHDGFVENGEIVNDRTVDALVKMALA QADAGADILGPSDMMDGRIGAIRAALESEGHSHVTILSYAAKYASAFYGPFRDAVGAS SALTGDKKTYQMDPGNSDEALRLVARDLSEGADMVMVKPGMPYLDICRRVKDTFGVPT YAYQVSGEYAMMQAAIQNGWLDGERVMMESLLAFKRSGCDGVLTYFAMDAAKALQG" gene 932681..933202 /locus_tag="SKA53_04653" CDS 932681..933202 /locus_tag="SKA53_04653" /note="COG1079 Uncharacterized ABC-type transport system, permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTLIDIITSLIDFRTFSSIWYWLAVLVTWAVATHWVIGVPFDMV VRARRQGGQAAQDLEIMVAINLRRLMTISGTPAVILVGMGAFVVTAAAMLGFVYGLEL AQGLFCLAFPLVFVGLLTQRSCLQFAQDQPTGPALILAMVRLRFWIQLIAITALFCTA LLGIYVLLSQRFG" gene 933244..936690 /locus_tag="SKA53_04658" CDS 933244..936690 /locus_tag="SKA53_04658" /note="COG1197 Transcription-repair coupling factor (superfamily II helicase)" /codon_start=1 /transl_table=11 /product="transcription-repair coupling factor" /db_xref="CDD:10915" /translation="MSDHTHITVSGAPEGFDAKLILAELAKGQPVCHIARDDKRLAAM QSALAFFAPGVPVFVFPAWDCLPYDRVSPNTDISAARMATLAALVHGMPGQFILLTTL SAATQRVPARNTLREAAFTATVGKRLDEGALRAFLVRMGFTQSPNVMEPGDYAVRGGI IDIFPPGQSGPVRLDLFGDVLDAARRFDPATQRTVEKLTEVELAPVSEVILDEAAITR FRQNYRIEFGAAGTDDPLYEAVSAGRKHAGVEHWLGFFQDDLETLFDYLPKATITLDD QIGPQRVARWESIADQYGTRMHALTQKGRMDSVYKPAPPQLLYLDDAAWARAVAERRV LQFSPHKQATGPGVIDAGGRMGRSFAPERQQENLSLFGALAAHIKARSAKGPVIVASY SDGARERLEGLIEDEGVGETIAISDFSRIGKTGVYLAVWPLDQGFESPGLTVISEQDV LGDRLIRQTKRKRRAENFLSEANSLAPGDLVVHVDHGVGRFEGMEVVTALGAAHECLL IAYAEETKLYLPVENIELLSKYGHEAGLLDKLGGGAWQAKKARLKERIRQIAERLIRV AAERALRKAPVLEPESGLWDQFLARFPYAETDDQLSAIDDVLSDLGSGQPMDRLICGD VGFGKTEVAIRAAFVAAMAGVQVAIVAPTTLLARQHYQSFAERFRGFPVNVRPLSRFV SPRDAALTRDGIAKGTVDIVIGTHALLAKAVNFKNLGLLIIDEEQKFGVQHKERLKQL RTDVHVLTLTATPIPRTLQLSLSGVRDLSVIGTPPIDRLAIRTYVSEFDTITVREALL REHYRGGQSFIVVPRITDMDEMEAFLREEVPEVTFISATGQMAAGELDDRMNAFYDGK YDVLLATTIVESGLDIPTANTMIVWRADMFGLSQLYQIRGRVGRSKTRAYAYLTTKPR QKLTTTAQKRLRVLGSIDSLGAGFTLASQDLDIRGAGNLLGEEQSGQMREVGYELYQQ MLEDQINAIRSGAAEGIIDDGQWAPQINLGVPVLIPEDYVPDLDVRLGLYRRLSNLTT KVELEGFAAELIDRFGPLPREVNTLLLVVRIKAMCKKAGISQLDAGPKGATIRFHNDK FASPAGLVDFINDQRGQAKVKDNKIVVLRDWDKERDKIQGAFNIARDLAAKLAEETKK AG" gene complement(936768..937976) /locus_tag="SKA53_04663" CDS complement(936768..937976) /locus_tag="SKA53_04663" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="multidrug (bicyclomycin) efflux pump, Major facilitator superfamily(MFS)" /db_xref="CDD:12168" /translation="MISPRQRLGQTEFIALMAMVVATVAFSIDAMLPALPQIGAALSP DNLNNAQLIITSFVLGMGIGTLFTGPLSDAYGRKPVMIAGAVVYVVGCGLAWAAQSLE LMLAARVLMGLGASGPRVVAMALVRDIYQGRDMARIMSFVMAVFALVPALAPTLGHFI ILGFGWRAIFAAFMLFSVITLLWLLIRQPETLMPENRRALSIRALYTATVEMFAHRTA RLSIAVQTLVFGILFIVLSSTQQVFDVTFGQGAYFHYWFGGIAILAASASLLNARLVM RLGMRAIIKAMLIVQIGITLAMIAITAVDGPYWLAFGTYVIWVTGNFFQAGLTIGNLN ALAMEDMGHMAGLAASIIAAISTIGAVMIAAPIALMFDGTPLPMAVGALVAASIALWL TTKITRPGDA" gene complement(937973..938617) /locus_tag="SKA53_04668" CDS complement(937973..938617) /locus_tag="SKA53_04668" /note="COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis" /codon_start=1 /transl_table=11 /product="DSBA-like thioredoxin family protein" /db_xref="CDD:12152" /translation="MVKLDIISDPICPWCYIGKANLDAALAQFVDHPFTIEWHPFQLN PDMPAGGMDRKTYLETKFGGKAAAAKAYAPVVAHAEKAGLTINFEAMQVTPNTIDAHR LIHWAGIEARQLLVVDLLFKAYFVEGRDIGSHEVLADIADMAEMDAALITRLLASDAD TADIRARDAHSRDMGISAVPTFVVANQHAVPGAQPTDLWVKIISDIIAQIGDEA" gene 938714..939337 /locus_tag="SKA53_04673" CDS 938714..939337 /locus_tag="SKA53_04673" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /db_xref="CDD:16530" /translation="MTEIDPRNLIRIAHENGSASVAQPLDLGARVRELRKARDWTLEQ AARQAGLARSTLSKIENGQMSPTYDALKKLAVGLDISVPQLFTPPAKGQVNGRMAVTR GGQEAVQITTTYEHALLAESLSTKKMLPYRARVRARSMEEFDGWVRHDGEEFLYVLTG QVRLYTEFYEPIALKRGDSAYYDAAMGHNVVSISAEDATILWVTSLS" gene complement(939417..941249) /locus_tag="SKA53_04678" CDS complement(939417..941249) /locus_tag="SKA53_04678" /note="COG4166 ABC-type oligopeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic substrate-binding protein" /db_xref="CDD:13433" /translation="MGNITKMAFHFGRLIAAWRMGAAMIAMAGIAFAEPQHGIAMYGD PALPPDFVSLPYANPDAPKGGRIVTSEVGGFDSLNPFILKGSVSWQLRYFVGESLMAR SLDEPFTLYGLLAESVQTSPDRDWVEFTLRPEARFSDGSPVTVADVIWSFETLGTIGH PRYLGFWTRVASIAQTGDRSVRLTFNVADRELALLAGLRPILKKAQWEGVDFAQSTLD VVPITSAPYVIDDFEAGRFISLRRNPDYWGVNVPFQRGLHNFDEVRIEFFGDETAAFE AFKTLEVTTNREFNVARWDGQYDFPAVQSGDVTLSVLGHERPSGMTGFVMNTRRAQFA DWRVRDALIHAFNFEFINDAMTGGAQPRITSYWSNSPLGMHHGPATGRVAEFLAPFAA DLIPGTLEGYNLPIGDGTERNRAGTAAALDLMAQAGWTVQDGVLRNAAGTPFTFEILL QQGGSENQSIVDMYVQSLGRIGISPRVSLADGAQYKERVDAYDFDMTYYRVGLSLSPG NEQFNYFGAAAADQPGGRNVMGLKSPAVDAMINRLLTSQSQDDFVAAVQALDRILTAG RYVIPIYQWNISRIAHARELRYPENLPIFGDWPGWQPDVWWYED" gene 941502..942275 /locus_tag="SKA53_04683" CDS 941502..942275 /locus_tag="SKA53_04683" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="D-beta-hydroxybutyrate dehydrogenase" /db_xref="CDD:25396" /translation="MNLQGKTAIITGSTSGIGLGIARALAQAGVDVVLNSFTDTEDDH ACAADIASSTGVTARYIQADMSKGAECRRLIADAGGCDILVNNAGIQHVAPIQDFDPA KWDAIIAINLSSAFHTTAAAVTGMRDRGWGRIINVASAHGLTASPYKSAYVAAKHGII GLTKTVGLETARDPITCNAICPGYVLTPLVEAQIPATMKEYGMSRDEVIEKVMLARQP SKQFATVEELGGTAVFLCSDTAAQITGTAISVDGGWTAQ" gene 942272..943303 /locus_tag="SKA53_04688" CDS 942272..943303 /locus_tag="SKA53_04688" /note="COG1752 Predicted esterase of the alpha-beta hydrolase superfamily" /codon_start=1 /transl_table=11 /product="phospholipase, patatin-like family" /db_xref="CDD:11463" /translation="MKRINLALQGGGAHGAFTWGVLDRLLQDDGIEIAAISATSAGAL NAAALKSGWVRDGRGGARENLDWLWGQVGAVTDARLTDWVSSMAPAAHVVAQAMKYSP AYAALDMTSRMMSPYVTGPLMRNPLEKIVKQFRYDAVCGQVGPALHICTTNVRSGKIR VFSGDEISSDVIMASACLPTLFQAVEFTDPRTGKSEAFWDGGYSGNPALFPLFAKDLP DDILVVNINPLYRAELPTDVQAIQNRINEISFNSSLLRELRAIAFVKRLLADGSMTHG TMKDVIVHMIADDALMNELNVATKTIPQPVILARLKEAGQAAADAFLKNHKSDLNVKS TVDVDMMFN" gene complement(943296..943898) /locus_tag="SKA53_04693" CDS complement(943296..943898) /locus_tag="SKA53_04693" /note="COG1279 Lysine efflux permease" /codon_start=1 /transl_table=11 /product="L-lysine exporter, putative" /db_xref="CDD:10995" /translation="MLAAGVTGFATGFALILAIGAQNAFVLRQGLARQHVFWLCLLCA TSDAVLITAGVMGFGYLVTLYPAFPQIMAWGGAAFLAVYGALRLLAAYQGDYAMQVAG VSASLWRVLATGAAFTWLNPHVYLDTLGLVGAVSTQFTETALKAAFGAGAVLASYTFF FTLGYGARLLAPVMQSARAWRRLDLLIGLVMWALAVKLVS" gene complement(943903..944631) /locus_tag="SKA53_04698" CDS complement(943903..944631) /locus_tag="SKA53_04698" /note="COG2928 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12277" /translation="MADPLNLDPKRRASRGVIARLRGNFLAGLIIIAPIGLTLWLIWT VVGWVDSWVWPFVPNYYHPEPMINRLLGRGVENQIMVNVRGVGVVIFLIFTIIVGWLG KGLIGRSFIGIGERFVDRMPVVRSIYNAAKQIAETVFSQRETSFDKACLVEYPRKGIW AIAFISTDAKGEINAKLVHGEVIVTVFLPTTPNPTSGFLLFLPRRDIIELEMSVEDAA KLVISAGLVYPNNKAVADLPDAAE" gene complement(944714..945622) /locus_tag="SKA53_04703" CDS complement(944714..945622) /locus_tag="SKA53_04703" /note="COG2313 Uncharacterized enzyme involved in pigment biosynthesis" /codon_start=1 /transl_table=11 /product="indigoidine synthase A family protein" /db_xref="CDD:17462" /translation="MTFPMTYCAEVAAALADGRAIVALESTIITHGMPFPQNVQTARL VEQDVRDAGAVPATIAVMEGRLHIGLEASELDALGQAQHVAKLSRADLAACIATGGTG ATTVAATMIAAHLAGIQVFATGGIGGVHRGAETSFDISADLQELALTPVTVVAAGAKA ILDLPKTFEVLETLGVPVIVYGQDSIPAFWSATSDMAAPLRMDDAAQIAASHKMRAAM GLAGGQLVTNPIPAGDEIPAATLAPIIAQALAQADAQKISAKAVTPFLLDQIFALTDG RSLSANIALVRNNARLAAEIALALLK" gene complement(945619..946509) /locus_tag="SKA53_04708" CDS complement(945619..946509) /locus_tag="SKA53_04708" /note="COG0524 Sugar kinases, ribokinase family" /codon_start=1 /transl_table=11 /product="kinase, pfkB family" /db_xref="CDD:28254" /translation="MMQQPDILCIGSVLWDVIGRAPNPMRLGSDVPGRITRLPGGVAM NIAMTLRRFAMVPALLSNVGRDTEGDDLIGAAQRMGLICDHVYRSDDLPTDIYMAIEG ANGLIAAIADAHSLEAAGDKILRPLANGALGSVTAPWAGPVALDGNLTVDLLRDIATS PLFRNADLRVAPASPGKAERLLALLGHPSATLYVNLEEAGLLCQTTFASSADAAAGLI ARGARRVLVTDGGQSASEATGNDIITRVPPAVMVTRVTGAGDTFMAAHIASEAQGMAR DAALDRACQAAATYVSGEIA" gene complement(946548..947429) /locus_tag="SKA53_04713" CDS complement(946548..947429) /locus_tag="SKA53_04713" /note="COG5266 ABC-type Co2+ transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14388" /translation="MLSNVTSSALDNARRRDTLEETNKEPIMRALSVIFCLLAVPATA HEFWIAPLDYQVSPDSKLQANLVNGEGFAGVTIPFLPRGILNALQFSGDQTAAITGRP GDTPALQMDPIGDGLAILGYQSAPASIEYANWEKFQAFVDHKDLGNLRAMHDARGLPD AGFTETYMRFSKSLVSVGSGAGADRRVGLETELVALTNPYTANLADGIAVQLFYRNDP RADAQIEVFARSPEGEVTTSYIRTDADGIARVAVLPAHEYMLDAVLIREPSAVLQDAT GAVWQTLWANLTFAVPQ" gene 947428..948687 /locus_tag="SKA53_04718" CDS 947428..948687 /locus_tag="SKA53_04718" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MSAASAHEVIPTIADMRVDGDRIVFDLRANLESFVAGVDLSETT DTDLSAEAASYDSLRALDPDALAAQFGAFWPQMAAAITLRAGDVVLVPELDSVTVPPI GNPELLRTSDIRFSAALPAGATSIEFGWTGALGAIVLRQMDVPEPFDGYLDNGATSGP VALTGGDRATGWQTFANYIPVGFDHILPKGLDHILFVLGLFFLAAQVGPLVLQISLFT LAHTITLALAALGYVSIPGEIVEPLIAASIVFVAVENIYTRQVSRWRPYVIFGFGLLH GLGFASVLGEFGLPQETFVAALIGFNVGVEVGQLAVIAVMFLCVWQAIRIDRGANEVA QGFALYGVLFAAALALIALNPPMLVELMENPVWVFAAPLAAIFALSGLSIALRDQIDA YRRIVTIPASAAIAAVGAFWVVERVFL" gene 948838..949668 /locus_tag="SKA53_04723" CDS 948838..949668 /locus_tag="SKA53_04723" /note="COG0052 Ribosomal protein S2" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S2" /db_xref="CDD:4174" /translation="MPDPLLRLKPEKETTMALPEFSMRQLLEAGVHFGHQTARWNPKM GQYIYGSRNGIHIMDLTQTVPMLDRALQVIRDTVAKGGRVLFVGTKRQAQTPVMEAAE KSAQFFMNHRWLGGTLTNWQTVSQSISRLKAIDEASANGFAGLTKKERLGMEREQGKL QASLGGIREMGGVPDLLFVIDVNKEALAIAEANKLGIPVVAVVDTNCSPAGIDYVIPG NDDAARAIALYTDLAARAALDGMTAQLGAAGVDMGAMENYAEETLAQEAADAAEAANA " gene 949739..950611 /gene="tsf" /locus_tag="SKA53_04728" CDS 949739..950611 /gene="tsf" /locus_tag="SKA53_04728" /note="COG0264 Translation elongation factor Ts" /codon_start=1 /transl_table=11 /product="elongation factor Ts" /db_xref="CDD:25645" /translation="MAITAAMVKELRDSTGAGMMDAKKALTETDGNMEAAVDWLRTKG LAKAAKKAGRTAAEGLVAVAVEGGKGIAVEVNSETDFVAKNSDFQKMVQGIADVALTV DDVDALKAADMGGKTVEQTVTDTVAVIGENMSVRRMAVLTGGQVVTYVHNAAAPGMGN IGVLVAMTGDNEAFGRQVAMHIAAANPSALSEADLDPAMVEKEKQVQIDIARESGKPD AVIEKMIVGRMQKYMAEVTLLSQQFVVNPDLTVAAAATEAGVTITGYVRLEVGDGIEV EKEDFAAEVAKLNS" gene complement(950705..951151) /locus_tag="SKA53_04733" CDS complement(950705..951151) /locus_tag="SKA53_04733" /EC_number="4.2.1.10" /note="COG0757 3-dehydroquinate dehydratase II" /codon_start=1 /transl_table=11 /product="3-dehydroquinate dehydratase" /db_xref="CDD:10625" /translation="MQHAILILNGPNLNLLGTRQPEVYGPTTLQDIEAICAAKAISLG VTVEFVQSNHEGVLIDRLHAARGVFDGIILNAGAYTHTSIALMDAVSSIMLPVVELHL SNIHAREAFRHQSYIAPVAIGQICGFGAAGYPLAMEALTGYLGTHG" gene 951333..952391 /locus_tag="SKA53_04738" CDS 951333..952391 /locus_tag="SKA53_04738" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25539" /translation="MTHAKVIITTMKNEAPYILEWVAHHLVIGFDHIVVLTNDCTDTT NAILTRLDALGYVTFQPNKKGPGGVHRTAIRRAQRLDVVRKAEWLYVTDADEFLNIHC GDHSVDALIAASGGDGVDVISVPWRIFSYNKRVILRDSPVTVQFTDAEPAYADGGAGR RFVKSLFRNKDVYHRIGLHNPHVRAEHGTDLTWALPGGLQASRLQAGNHAQPPFGEEF AQINHYAVRSAQAYLLKRYRGRANHQSHVLDTGYWDRWNRGGCEDTTIHRYAALTQAL LDMFKADPVLARMHRKGFRWHKAKLAELLQDDAYADLYAKISASDPVSVVKKDRDIRE SRDSVSEQQDHIDDTPCA" gene 952372..953220 /locus_tag="SKA53_04743" CDS 952372..953220 /locus_tag="SKA53_04743" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIRPALKGIGTLWIGGPLSFLEQMCLLSFVAQGHKVTLFHYGEI AHVPQDIEVIDAREIHDPAMIIYNKQFGTPVVQSDIFRLHMLRQTNLILADSDVLCLR PFDLPTDHVFGYFRRRELCNAIIGLPQDSPGLNAYLDYVQDEYPIPPNLPPEDHDRML ALKAAGQIKHASEQAHSVYGPGVFTTFMEQSGEISHATPPSVFYPLPFRQAGQISDIH VREFRAAYIKDDTLGVHLWGRRIRWWVHGRGIARYSLMDRTLRHLGIDPKAAPIQLPS RIPTSA" gene 953305..953952 /locus_tag="SKA53_04748" CDS 953305..953952 /locus_tag="SKA53_04748" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTSKVIGVLPGISTEEQPKKARRMSKDSVRRKFLEKLPKGGIAV EIGVWQGEFSPTIIELIAPEKLVLIDPWAHIEDDSHAEAFVGRTGKTKMDRIFDGVVK KFETEIAAGQVALIRDFSVPALAQFTDQSISFAYVDGDHSYEGVSADLASLFPKMKRG GIMAFDDYHRRGWWGDGVIRAINEFLGAHPRDLRIRAVVGAQIAIEVLDPSDQTA" gene 953989..955875 /locus_tag="SKA53_04753" CDS 953989..955875 /locus_tag="SKA53_04753" /codon_start=1 /transl_table=11 /product="glycosyl transferase, group 2 family protein" /db_xref="CDD:25539" /translation="MRLIVSTMKDEGPFILEWIAHYLALGFDHFIINSNDCSDGTDLI LQRLQDMGIVTHIANQGPWEGGPQRAAYDNAMAHPKYAEAEWVLVCDADEFLDIKVGD GTLDALFAAAPKATAFTFIWQLFGHNNIVTFHDRLITTQFTRCAAPQQIHPMQSRAIK TLFCNNGQYRLISTHRPKGILPRRVKHAYWVDGNGDRLTGFEHQGWAFLGTGHGYGDR LARMNHYAVRSLESYMMKRLRGDVNTTSFHGKMEESGETYWRLHCWNTVENQSLAQRS AAISAGMDRLKSDALLHKLHQQSVNYHQNRIASLRSTPQFTAFVEKYSDFMGDRPHLL KDNVLTDLNKAYDTQTFDVTTLLSDFQITRYKEMRTRRVVRKWPWFAGMDALETSTDP EIFNRIGTSGPMPRMTAGALPALPEALTQGITAAVSAHHAKAPHQPVTARFLAQASAL KCKSWLLIGGRDRALIDDILTRNEVESLIVIDPWGLRDSHLAPGSVVPDADRLALDHA FFQTIVIYADAIKSGRLRFVRSTPASALKLIEDRSLDVVMIAGTKPADRALRLMERAA HKLRKNGRLLFNGYRVRTKKGREMIGAIHKFVAASPGRRRFLAAHGHHVAVELLPVLR KRDY" gene complement(955938..956645) /locus_tag="SKA53_04758" CDS complement(955938..956645) /locus_tag="SKA53_04758" /note="COG0704 Phosphate uptake regulator" /codon_start=1 /transl_table=11 /product="phosphate transport system regulatory protein PhoU" /db_xref="CDD:10573" /translation="MNDHISSAYDRDLEVITTLIVKMGGLVEDAITNAARSLGDRDVE LAEVVRKADKVIDALEEQINEEAARTIALRAPVSKDLRAILTVLRLAASLERIGDYAK NIAKRTSVLVEMAPVSGSDAALRRMAREVESMLKDTLDAYVRGDAQLAEEVRQRDQEV DQMYNALFREFLTFMMEDPRNITACMHLHFMAKNIERMGDLTTNMAEQVIYLVTGVMP EEARPKGDRTSYVSDAR" gene complement(956720..957769) /locus_tag="SKA53_04763" CDS complement(956720..957769) /locus_tag="SKA53_04763" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="Probable two-component sensor histidine kinase" /db_xref="CDD:14132" /translation="MKGPVLTETTLSLIAAIPMPVLVIGQDERIRATNPALDLILGRD LTGKHHITALRQPGVIDAIARVRGSGRAASVRFVFRDRDKDTPYLVHITAAGQDIVLC FEDQSAAEDVGKMRRDFVANVSHELRTPLTALLGFIETLGGAARDDATARARFLGIMA HEAERMTRLVDDLLSLSRVEEDERVRPRELVDLCGLLASVIKGLEPQAAAADVTVRLD LARDVMRVPSDAGQLTQVFANLIENGIKYGGSGKELVVTLHEPTNHLRLRGQGVQISV TDKGDGIASHHIARLTERFYRVDTHRSREVGGTGLGLAIVKHIVNRHRGHLLIESELG QGTRVSIFLPVESLS" gene 957933..958304 /locus_tag="SKA53_04768" CDS 957933..958304 /locus_tag="SKA53_04768" /note="COG0496 Predicted acid phosphatase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMMMKVADAACVQGITILVIGDLDQWQASGRLRGVPAGCVYLGI DQLNPFTLRRHAPDLILSPLLSDGFDAVDVAEKLNATQFRGMYRVVADNLPDPEIIRG DIRAAAPDLDFDLLVLPRETP" gene complement(958301..958822) /locus_tag="SKA53_04773" CDS complement(958301..958822) /locus_tag="SKA53_04773" /note="COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily" /codon_start=1 /transl_table=11 /product="Predicted ferripyochelin binding protein" /db_xref="CDD:10532" /translation="MSLYALGDLAPVVADDAWVAPGCFVIGRVELAAGSSVWFGSTLR GDNETIHIGAGTNIQENCVLHTDMGHPLVIGAGCTVGHKAMLHGCTIGANSLIGMGAT VLNGAVIGDNCLIGAGALVTEGKVIPDGSLVMGAPGKVVRALDAAAIARLQASALQYQ KNAARFRQDLRAI" gene complement(958819..959457) /locus_tag="SKA53_04778" CDS complement(958819..959457) /locus_tag="SKA53_04778" /note="COG0194 Guanylate kinase" /codon_start=1 /transl_table=11 /product="guanylate kinase" /db_xref="CDD:10069" /translation="MQRRGLLIILSSPSGAGKSTLAGRLRQWDGSLRFSVSATTRPAR AGELDGREYFFVTKDAFQAQVAAGDMLEHALVFGNYYGSPKAPVQTAIEDGRDVLFDI DWQGAQQISNSSLSPHVLSIFILPPSIPELHRRLVTRGQDSPEVIEKRMQKSWDEISH WDGYDYVLVNDDIDATEQALKTIISAERLRRSQQPQLVDHVRSLQTQFGELT" gene complement(959461..959607) /locus_tag="SKA53_04783" CDS complement(959461..959607) /locus_tag="SKA53_04783" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIRSMTIFASQPDDLVAGSWVCDRPTGRKLVALVHVIDQMRQQI QTME" gene 959794..960447 /locus_tag="SKA53_04788" CDS 959794..960447 /locus_tag="SKA53_04788" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSIHHNNPGPGHHGLPGANSPILRNLEIYWQSLRHARHIPARND IAPQGIDAALPYAFILQRVGPGVARMRVAGQKIHELLRMDARGMPVSVLFAPDSREQL RALVETAFTQPAIVAASLIAPAQRFRTALSGTILMLPLRDENDQTSRVLGALVSDGAT DDRPRRFDLAPGRAVRIDTLAITLASSQPVPPPADVAPQTQRPDVVRPALRLVIDNG" gene complement(960448..961818) /locus_tag="SKA53_04793" CDS complement(960448..961818) /locus_tag="SKA53_04793" /note="COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase" /codon_start=1 /transl_table=11 /product="3-deoxy-7-phosphoheptulonate synthase" /db_xref="CDD:6466" /translation="MTDWQKTDWRKKPRVQMPDYTDAAALAAVEARLASYPPLVFAGE ARKLKKQLAAVSRGEAFLLQGGDCAESFAEFSANGIRDTFKVLLQMAMVLTYGAKVPV VKVGRMAGQMAKPRSAPTEVVGGVELPSYRGDIINGFDFTPEARNPDPDRMLQAYLQA AATLNLLRAFSTGGFANVHEVHKWTLGFTDANEVKKYSDMASRISDTLDFMQAAGLST ETNHELQTVDFYTSHEALLLEYEEALCRLDSTSGKMLAGSGHMIWIGDRTRQPDGAHV EFCKGVMNPIGLKCGPSMTSGHLKALMASLNPQNEAGRLTLIARFGAGQVGDHLPRLV RAVQEEGANVVWTCDAMHGNTIKSSSGYKTRPFESVLREVKEFFGIHNAEGTIPGGVH FEMTGADVTECTGGVRAVTDEDLSDRYHTACDPRLNASQSLELAFLVAEELSARRNNL AQAKAS" gene 961980..962981 /locus_tag="SKA53_04798" CDS 961980..962981 /locus_tag="SKA53_04798" /note="COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /db_xref="CDD:14108" /translation="MSQAPQIIDVGPISKPRRFVFVLMDQFTMLCFACAVESLRIANR TAGKQIYDWTIIGDGGDIASCSNGCAFKLESDLIELERDDTIMLCGGIDVQKATTKRV LNWLRREARRGVTVAGLCTAGYAMAKAGLLDGKRATIHWENQDSFIEEFEEVELTKSV FVVDGNRITTAGGTASIDLMLKLIADHHGEELANAVADILIYSAIRTDQDTQRLSIPT RIGVRHPKLSRVIQLMEGNIEEPISPAVLARDVGMSTRQLERLFRRYLSRSPKRYYME LRLQKARNLLMQTDMTVINVALACGFASPSHFSKCYRSHYDTTPYRERGSHAARLSV" gene 962996..964516 /locus_tag="SKA53_04803" CDS 962996..964516 /locus_tag="SKA53_04803" /note="COG3878 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13192" /translation="MARRLVQMSLTPARMSGIGAAIYGGAVGQLGFLLGGVGFAGIAV WLLRRVPAPPPPPREPVLPPAPDQVYLDIAAAHDLGTGAAFAARINAIAPKAKLPMLG LADLARLGDVIDARQRKQDQFRLSPAIAVIRQARRGIDITRDGSSWLGGLPHLGDTPW PRSAQDVPLHHLAQIALEDLPDHALPPELPRAGNLCFFVDSATGHKVLHIAPHSMGPT ALPADLPPIAAGPEHDDQTTMPPVFARWPVGFHPLPAQDSATAMALSFGDDKGGTPDA DSYAVTAPALARPWLWDTAHRVIHALMQAEHDIPRTIAAARARVADHGDRYAAELAFL IENETAFRRYVQAAAKWVAGRDRFTPMDPEDIALLETLFGQISTRPNRQPGFALFYRY ARGQITRLRDARNATLMVLARGEPAVYALLPEPVKADLDAHHRLPSQGRWHQMFGAAS DGQAQTGMHAHDHMLLQLHADALVGWGDMGVIRFWISTDDLAARRWDAVAVTRQST" gene 964667..965851 /locus_tag="SKA53_04808" CDS 964667..965851 /locus_tag="SKA53_04808" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, periplasmicsubstrate-binding protein" /db_xref="CDD:10552" /translation="MKKLMMATTAMTLIAGGAFAQDVKIGVVLGFTGPLESITPAMAA GAELAMAEVTESGLLLDGATVTSVRADSTCIDASAATAAAERVVTSDGVTAIMGADCS GVTGAILQNVARPNGIVMISPSATSPGLSTAEDDGLFFRTAPSDARQGVIITNILQDR GFNNVAVTYTNNDYGKGLADAFQAEFEAAGGTVTISAAHEDGKADYSAEVGALASAGG DVLVVAGYVDQGGSGVIRAALDTGAFDTFYLPDGMVGSVLNDRFGAELNGTFGAYPGT DSPGAALFVTMAEGAGFDGTSAFAPESYDAAALIMLAMAKAGSSNSADFKDHVFDVAN EPGEVIYPGELAKALELIAAGQDVNYEGASAVELIGPGESAGNYQEIEFKDGVYSTIG FR" gene 965947..966732 /locus_tag="SKA53_04813" CDS 965947..966732 /locus_tag="SKA53_04813" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, ATP-binding protein" /db_xref="CDD:10285" /translation="MIVVENLVKTFGGFRAVDGASLRIEQGSITGLIGPNGAGKTTLF NVIAGVLQPTSGRVTMMGEDITGLPPHALFHKGLLRTFQIAHEFSSMTVRENLMMVPA GQSGETLWNAWFGRKRIADEERALCAKADEVIEFLTIEHLKEERAGNLSGGQKKLLEL GRTMMVDAKIVFLDEVGAGVNRTLLNTIGDAIIRLNKERNYTFVVIEHDMDFIGRLCD PVICMAEGRVLAQGTLAEIKANEQVIEAYLGTGLKNKDKVAVV" gene 966770..967483 /locus_tag="SKA53_04818" CDS 966770..967483 /locus_tag="SKA53_04818" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, ATP-binding protein" /db_xref="CDD:10284" /translation="MTEPFLIGDTMTGGYGKGPDILHGCTIAVERGEIAVIVGPNGAG KSTAMKAVFGMLNVNSGAVRLDGEDITHLTPQERVVKGMGFVPQTSNIFTSMTVEENL EMGAFIRRDDFSDTMAQVYDLFPILKEKRHQAAGELSGGQRQQVAVGRALMTKPKVLM LDEPTAGVSPIVMDELFDRIIEVARTGIPILMVEQNARQALEIADKAYVLVQGRNAHT GTGKQLLADPEVRRSFLGG" gene 967487..968497 /locus_tag="SKA53_04823" CDS 967487..968497 /locus_tag="SKA53_04823" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="ABC branched-chain amino acid transporter family, inner membranesubunit" /db_xref="CDD:10430" /translation="MDVINALVVLANFVIVPGLAYGAQLALGALGVTLIYGILRFSNF AHGDTMAFGTAITIIGTNALIAAGITFGPLPTALIALPLGIAATCLLVLGTDWTVYKF YRTKKAAPVILVIVSMGVMFIMNGIVRFIIGVGDINFADGERFVVTARGFREATGLAE GLAIRTTQVITVIVALIAMALLFWFLNKTRTGKSMRAFSDNEDLALLSGINPDWVVKV TWMIVAALATTAGVLYGLDKSFKAFTYFQLLLPIFAAAIVGGLGSPLGAIAGGFVIAF SEVTVTYAWKRVLGYILPENLAPEALVQLMSTDYKFAVSFAILIVVLLFKPTGLFKGK SV" gene 968494..969798 /locus_tag="SKA53_04828" CDS 968494..969798 /locus_tag="SKA53_04828" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, permease protein" /db_xref="CDD:13442" /translation="MNPAIRAPLLFGFVAVLMIGTGIVQGWNSALLILNMGLISAIMA LGVNLQWGFAGLFNIGVMGFVALGGLAAVLISTPPTEGAWAAGGWNIVIGLLLGGMTV IGAILAQHRMALGRIRTLTTLAILIAGFFIYRAVFDPGVTAIEAINPSVSGNIGGLNL PVLLSWPVGGLLAAGAAWIIGKTALGLRSDYLAIATLGIAEIIIAVLKNEDWLSRGVK NVIGLDRPVPFEIELQQDPTFVARAVGLGLDPVTASGIYTKLAYSALFAVVLLILLWM AQMALKSPWGRMMRAIRDNETAARAMGKDVTARHLQIFILGSAICGVAGAMMTTLDGQ LTPGSYQPLRFTFLVWVMVIVGGSGNNFGAVLGGILIWWLWVQVEPMGLALMQILSSG LEDGSALQTRMIDAAAHMRLLTMGLLMLIVLRFSPRGLIPER" gene 969854..972325 /locus_tag="SKA53_04833" CDS 969854..972325 /locus_tag="SKA53_04833" /note="COG2366 Protein related to penicillin acylase" /codon_start=1 /transl_table=11 /product="penicillin amidase family protein" /db_xref="CDD:25823" /translation="MFTLFRWAVRLTTTLIVLMVAGVVLAWYFATRSLPDYDATAQVA GISAPVEIVRDNANVPHIFGATDEDVFFGLGYAHAQDRLWQMTMLRRTVQGRLSELYG ARTFDIDQVLRRYDLYNAATASVVAQDASTLAALTAYADGVNTWLDEVNKGALGRGAP EMWLFNHPIARWQPADSIAILKLMALQLTSSLENEVLRARVSLIVSPARLSDVLPDDP GSGVAALPSYAALVPDVVPNQPSTRMAYDPLMPVPPRALAGASNAWAANATRSATGST LLANDPHLGLTAPSIWFLARLELEGGGVIGGTIPGVPLILTGRSANLGWGLTTANVDD QDVFLEEVNPNNSEEYRGLDGWQSFVSRDSIITIKDAPSVTIRLRWTENGPVIPDDLF DLGTITPPGHVTAIGWTALSQTDTSMSAAMALMRARNVDQAIAAGELHVAPAQNLTLA DRNRVAMQTIGAIPMRDANHQSQGRYPSFGYLPENRWQGVSAYVDNPRFVDPDGGIVG NTNNKMIDRPFPRHVSFDWGDTQRVIRWRRLMQAREVHTRDSFIEAQLDSVSFTARTL LTFMGADLWFTGDAAPDGTPERRRQIALELLAAWNGEMNEHLPEPLIYAAWARAFQAR VIRDELGPLAAEFTHLDPVFLERIFRDVDGASIWCDVIQSAPVETCADIARQALDEAL IWIAENHGTAIEAVRWGDAHEATHDHPVLGATPILGWIVNIRQSTSGGDNTLMRGRTR GTGPAPFQNVHAAGYRAVYDFADPDSSVFISSTGQSGHPFSRYYDNLGEMWRRGEYIP MSLDPDLARAAAVGVTTLVPVESSE" gene complement(972393..973667) /locus_tag="SKA53_04838" CDS complement(972393..973667) /locus_tag="SKA53_04838" /note="COG2262 GTPases" /codon_start=1 /transl_table=11 /product="GTP-binding protein HflX" /db_xref="CDD:11968" /translation="MLEHDKPVTRAWVLHPELKSDHSRRAPVPALAEAVALAAALPDL DVLGADIVRLPKLHAGKLFGKGKIEELRIIFAEAEVELVLVDGSVTPVQQRNLEKAWG VKLLDRTGLILEIFSDRARTSEGVLQVEMAALSYQRTRLVRAWTHLERQRGGLGFVGG PGETQIEADRRAIDDQLVRLRRQLEKVGKTRALHRASRAKVPFPIVALVGYTNAGKST LFNMLTGADVLAKDMLFATLDPTMRKITLPTGDEVIMSDTVGFISDLPTELVAAFRAT LEEVLDADLILHIRDISHDQTEEQACDVMAILHKLGVAENAPLIEVWNKVDLLQGEAF EGRVNQAARTEDLFAVSALTGEGMAALLAAIPEKLKDPRSEALLTLSFAEGRKRAWLF EAGIVTDDQQTDEGYCMTVVWTALQQERFSRL" gene complement(973670..973903) /locus_tag="SKA53_04843" CDS complement(973670..973903) /locus_tag="SKA53_04843" /note="COG1923 Uncharacterized host factor I protein" /codon_start=1 /transl_table=11 /product="RNA-binding protein Hfq" /db_xref="CDD:11631" /translation="MAADKANLQDAFLNHVRKTKVPVTIFLVNGVKLQGVITWFDSFC VLLRRDGQSQLVYKSAISTIMPAQPISLYEGEE" gene complement(974030..975550) /locus_tag="SKA53_04848" CDS complement(974030..975550) /locus_tag="SKA53_04848" /note="COG0168 Trk-type K+ transport systems, membrane components" /codon_start=1 /transl_table=11 /product="Trk system potassium uptake protein TrkH" /db_xref="CDD:10043" /translation="MQWITRLPFFVVLMGLGAIAMLLPAAHGAVVEDFATMRVFFYGF VLFSVLTLLIALTMSGYVPANIARSQLIGLLAAFSVLPLMFAVPFYEAVGNTSFLDAW FEMVSSFTTTGATVYAGGADLTPSQHLWRSTVGWLGGLLVWITAVSIFAPMNLGGFEV RATAAVGRGATGSFTQIGGVADPSERLVRYTMALTPVYAGLTAVLWIGLVMLGERPYI ALAHAMAVLSTSGITPVGGLYFAASGFLGEVLIFAFFVFALSRLTFSRGLSGERNQWL WRDPEFTTALVLIGLATVALFLRHFVGTTEAQAPFSPRDVVTALWGTLFTVTSFLTTT GFESQFWGAATDWSRLSTPGLVLIGLALIGGGVATTAGGVKLLRIYALFRHLEREQER LLLPSSVGGGGRDARRIRRQGAYISWVFFMLFAISIAAVMVLLSLTGVPFETAMVLTV AALSTTGPLAVVAAETPIFYADLPEAAKIILAGAMVLGRLETLAIIALFNPEIWQR" gene complement(975550..976926) /locus_tag="SKA53_04853" CDS complement(975550..976926) /locus_tag="SKA53_04853" /note="COG0569 K+ transport systems, NAD-binding component" /codon_start=1 /transl_table=11 /product="Trk system potassium uptake protein TrkA" /db_xref="CDD:10440" /translation="MKVIICGAGQVGWQIARHLSGEKNDVTVVDNNPELVRRATDTLD VQGVTGFASHPDVLERAGARDADMVIAATYSDEVNMVTCQVAHSVFAVQRKIARLRAQ TYLDPAYGDLYRKDHLPIDVVISPEREVAEAALQRLAAPAAFDTESFLDGRAQLLGIT IADDCPVINTPLRQLTDLFSTLRAIVVGIRREGTLFVPSAEDQIFAGDDCYLFTHTED LNRTLEIFGKTQSKQERIVIIGGGNVGLGVALALEARTERIRVKVIEKDRAAAERAAD ALDRTIVLHGDGLDTALLDEAGIMNADAVLVVTDDDKTNLLAAVRAKEMGCAMAICLV NDPTLVPLMGPLDIDAYINPRATTVSSILRHIRHGRVRNVYSIGDAEAEVIEAQVLST SPIAGQKIKDIDFPEGTLIGGMMKEGKVIRPTADTRIEEGDVIAIFAMTADVPEVERL LQVSIDFF" gene complement(976923..978326) /locus_tag="SKA53_04858" CDS complement(976923..978326) /locus_tag="SKA53_04858" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="nitrogen assimilation regulatory protein NtrX" /db_xref="CDD:11911" /translation="MGDILITDDERDIRELISDILRDEGFSTRLAGTSDECMAQIAAE VPALMILDIWLKDSNMDGIDILKTVKRDHPEVPIVIISGHGNIEIAVAAIKQGAYDFI EKPFNIDQLLVVIRRAMETSRLRRENSELKRGEIAQAEMIGESAAFRMLKSQLDKVTK SNGRVMLTGPAGAGKEIAARYIHANSARANAPFVTVSSATIAPDRMEEVLFGREGAGR GVEPGLLEEANGGVIYFDEVADMPLGTQSKILRVLVDQRFQRVGGNDKVQVDLRVISS TNRDLSAAILAGVFREELFHRLNVVPIAVPSLEERREDIPVLADHFITLFNTVQGLPL RRLADDARALLQTMHWPGNVRQLKNVIERALILGESRGDISARELPATEDNTDDSGRI VLAGGLATLPLREARELFEREYLLTQINRFGGNISRTASFVGMERSALHRKLKSLGVV TTSKSGGRVAYIDGDVG" gene complement(978334..980562) /locus_tag="SKA53_04863" CDS complement(978334..980562) /locus_tag="SKA53_04863" /note="COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation" /codon_start=1 /transl_table=11 /product="nitrogen regulation protein ntrY" /db_xref="CDD:14130" /translation="MDFTRLVRWFRQRHVQNALTLTLLFCAPVLAGLTYWVVGPLGQG TSSRTLQVMLLIDLVFILIVMALVMRLVARMIAARRAKSAGSRLHLRLTSVFAVFALI PTVLVAVFSVLLLSVALDGLFSEPVGNVLRTSLTTAQAYEEEHIQDLTRDAQGLAAYL NRERQRDLFMDDGDLRLALGEVQGQIDRGLSEAFVIDSAGVIAARAVGSYEFDYERPA ADDFTRARDEQLVIFEDPENNEFRALIPLETFPDRFLYVTRDVDGNVLALLDETTETV QQYEQLASDQGRMLFQFGLLYLGFALILILGAIWGGLWFAERLSRPVGRLVSASQRVG SGDLDVRVIEDEGDDEISQLGHYFNQMTGQLKGQREALLNSNRISERRRRLFDSVLSS VTSGVVGLDADGRVAFVNPSARRLLSVNDDSADHSLSVAVPEFAALFEQVRQSGHESV QDQINLIRKGQQESLLVRMSPRRTDGGALEGYVVAFDDVTDLVSAQRMAAWGDVARRI AHEIKNPLTPIQLSAERIKRKFRAQVGDDAEALDQMTDVIVRQTNDLRRIVDEFSKFA RMPEPVLVLNDLTKVVADAIMLQRAGQPQVKITGDLPDVAILADMDATMISQALLNLI KNAGEATETYIEKHGSEGYAPQIRIAMQQDGNRVSITIADNGIGLPEDRARLFEPYVT TRDKGTGLGLSIVKKIIEEHGGTLTLTDADIFAGNTHAGAAAVIHLPAVQAQHENARI PA" gene complement(980686..982062) /locus_tag="SKA53_04868" CDS complement(980686..982062) /locus_tag="SKA53_04868" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="nitrogen metabolism transcriptional regulator, NtrC" /db_xref="CDD:11911" /translation="MMDGTILVADDDRTIRTVLTQALTRAGCKVHATSSLVTLMRWVE EGKGDLVISDVIMPDGNGLEQLPKIAALRPGLPVIVISAQNTIMTAIQAAEADAYDYL PKPFDLPDLMKRAARALETKRRAGISRAPDLNATEQGGDLPLVGRTGVMQALYRLVAR VMNTQLPVLITGESGTGKSLIARAVHDFSDRRSLPFIVVAPADLDGMDGPSTILSRAR GGTILFDEVSDLTDADQARIVRMLDTLGENAPRIMATSQNDLMIRMEDGSFREDLFYR LGGVTVAVPSLRERVDDIPLLADHFLARAEREGAPARRFGAAAIDMVRAYSWPGNVRQ LENAVRRLVFTAAEDEISRAEVEMVLGNQPAIEPLRSGGEGEKLSASVGKHLRRYFDL HGGVLPPPGLHNRILKEVEGPLIEIALDATGGNQAKCADLLGINRNTLRKKITDLDIR VTRRRKLM" gene complement(982059..983135) /locus_tag="SKA53_04873" CDS complement(982059..983135) /locus_tag="SKA53_04873" /note="COG3852 Signal transduction histidine kinase, nitrogen specific" /codon_start=1 /transl_table=11 /product="nitrogen regulation protein NtrB" /db_xref="CDD:13167" /translation="MIQDTALWSSLPVPALLLDGDDIIILSNPAAESFLNLSTRSLIG QRIWEKVMIDAPLEAPFARARANRTSLFVNDVDVGSGENPPMMCNLQFAPLQGSDDLM IVMISPREIASRVTQNHSSAKAAKSAIGMAEMLAHEIKNPLAGITGAAQLLSMGLTTE DRELTDLIVEESRRIVKLLEQVEQFGNLRPPLLKPVNIHDVLDRARQSASVGFGAHML YIEDYDPSLPRTMADADQLLQVFLNLLKNAAEANRDGGAIRLHTFYDTSLRVRRNDGT QSRLPLQIEIIDDGPGLPPAIAADVFEPFISGKENGTGLGLALVSKLIGDGGGWITVD SVPGRTCFRISLPLAPKETETGED" gene complement(983132..984133) /locus_tag="SKA53_04878" CDS complement(983132..984133) /locus_tag="SKA53_04878" /note="COG0042 tRNA-dihydrouridine synthase" /codon_start=1 /transl_table=11 /product="tRNA-dihydrouridine synthase, putative" /db_xref="CDD:16912" /translation="MSYLLTETTAIILDNVRLQPPVALAPLAGITDLPFRQLVASFGA GWVVSEMVASQEMVQAKPGVRERAELGYDQQGTAVQIAGREAYWLAEAARMIEANGAA MIDINMGCPAKKVTNGYSGSALLRDPDHALRLIEAVVNAVKLPVTLKTRLGWDHDCLN AADVARRAQDAGIRLVTIHGRTRCQFYKGAADWRAIREIKQAVSIPVIANGDITGPEA AKQALALSGADGVMIGRGAQGRPWVLAQVAARLHGTKMPVIPQGADFIDMVGAHYSAM LSFYGLDLGRRVARKHLGWYMDEAGTPAGLRKAILTHDTPDAVLRDLADALAMRVAA" gene 984318..985451 /locus_tag="SKA53_04883" CDS 984318..985451 /locus_tag="SKA53_04883" /note="COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase" /codon_start=1 /transl_table=11 /product="2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" /db_xref="CDD:28340" /translation="MTTTAIIVAAGRGTRAGGDIPKQWQDLGGRSIAALAMQPFADHP RVAHLVLVLHPDDLATDLWRDTPTASVVAGGATRKASVMAGLAAVPDTTTRVLIHDAA RPLVSAQIIDRVLTALDSHQGAAPAVAVTDTLWHGADGVVTGVQPRDGLYRAQTPQGF HLAPLLAAHLAQEDDATDDVGVARAAGLDVAIVAGDETNIKITTPGDFARAARLMGQD MDIRCGNGYDVHRFGPGDHVWLCGVKVPHGRSLQGHSDADVGMHAVTDAIYGALGMGD IGQHFPPSDPQWKGADSQIFLRHAVGLARDHGYRVSNVDCTLVCEYPKIGPHQGAMKA ALAAIMGLAADRISVKATTSERLGFTGREEGIASLATVTLVKP" gene 985448..985936 /locus_tag="SKA53_04888" CDS 985448..985936 /locus_tag="SKA53_04888" /note="COG1267 Phosphatidylglycerophosphatase A and related proteins" /codon_start=1 /transl_table=11 /product="phosphatidylglycerophosphatase, putative" /db_xref="CDD:15905" /translation="MTRLIATFFYVGHLRPAPGTWGSLAALPVAWALVMLAGPWALVA GIVLAYGLGHWATGVQTAGKADHDPSEIVIDEVAGQWIALLPVVFGAAARDADLLALW PGWVAAFVLFRLFDITKWGPIGWADRMHGPTGVMLDDVIAGAFAAIGVVALAALFHLV LL" gene 985933..986400 /locus_tag="SKA53_04893" CDS 985933..986400 /locus_tag="SKA53_04893" /note="COG1546 Uncharacterized protein (competence- and mitomycin-induced)" /codon_start=1 /transl_table=11 /product="competence/damage-inducible protein CinA domain protein" /db_xref="CDD:11260" /translation="MSAAAILQAARVRGILIATAESCTGGMVSAALTDVAGSSAVFER GFVTYTNAAKMQMLGVRAATLEAHGAVSEQVAAEMAQGALTHSAATLAVSITGIAGPG GSEHKPEGRVCFAIAAPDRCTTQTIEFGALGRAQVRQAARDHALGALLAALTP" gene complement(986242..986364) /locus_tag="SKA53_04898" CDS complement(986242..986364) /locus_tag="SKA53_04898" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIAGGLAHLRAAQGTKFYCLRGAAIRRGDCETDAPFGFML" gene complement(986361..986930) /locus_tag="SKA53_04903" CDS complement(986361..986930) /locus_tag="SKA53_04903" /note="COG2867 Oligoketide cyclase/lipid transport protein" /codon_start=1 /transl_table=11 /product="aromatic-rich family protein" /db_xref="CDD:12219" /translation="MQAATIHTVALWSKALETGGVLADIAHERGQTMPQHSETRVLPF SADQMYALVGDVAHYPKFLPWTAAARIRDTKDHGDHLVMLADLVISFKVFRETFGSKV TLWPATKRIDTAYLDGPFKHMESQWNFRDVEGGCEVSFFVDFEFRNRLLQGAAGMFFN EAMQRIVRAFERRAQELYGVSAANNAPSA" gene 986970..987515 /locus_tag="SKA53_04908" CDS 986970..987515 /locus_tag="SKA53_04908" /note="COG0634 Hypoxanthine-guanine phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="hypoxanthine phosphoribosyltransferase" /db_xref="CDD:10504" /translation="MPADHPPYVIDQMISAKSIAARIESLAREIGTEFAGTDKLVVVG LLRGSFVFIADLVRELDLPVEVDFLEASSYGDGMDSSREVRILKDLRGQIEGRDVLVV EDIVDTGHTLAHVTKFLVSRNPARLRTIALLDKPARREVDFKADWIGFEIPDEFVVGY GIDYGQRNRNLPYIGKVRFTQ" gene complement(987621..988580) /locus_tag="SKA53_04913" CDS complement(987621..988580) /locus_tag="SKA53_04913" /EC_number="2.8.1.-" /note="COG0320 Lipoate synthase" /codon_start=1 /transl_table=11 /product="lipoyl synthase" /db_xref="CDD:10194" /translation="MSPRDLKIPAQRHPEKQRRADAPQPKKPDWIRVKAPTSEGYKTT RDIMREHKLVTVCEEAGCPNVGECWSQGHATMMIMGEVCTRACTFCNIATGKPPEALD VFEPGRVADAVKKLGLNHVVITSVDRDDIADGGAEHFAQTIRAIRRQSPGTTIEILTP DFIRCDPSVLETVVAARPDVFNHNLETIPGLYPEVRPGARYFHSLRLLQRVKELDPSM FTKSGIMVGLGEDKQSVMQVMDDMRAADIDFLTIGQYLQPTPKHHRVDRFVTPEEFAG YEKAAYGKGFLMVSATPLTRSSYHAGDDFARLRDARNKKLGRG" gene complement(988683..989819) /locus_tag="SKA53_04918" CDS complement(988683..989819) /locus_tag="SKA53_04918" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTVRPGPERSDTYPAWVPEAVRNYLVHTEDGMSIRALARAQDCH PSTVLRQVRKLEIRRDDLLIDGALKSLSAQASAVPRHPSKGTGPMTRDAYLPAPDQTA PDQTAPLTQARIDQEARRILRRLCEPGAVLAAARDMPTAVVVRQGQAGDQLRTTSVDR EIAQAMALKDWIACTDPDARVARYFITATGRAALRRFTAQDENRAGGFGDKPSSAADD TGWDIVTLDHDHRGPIRYHVTESPLIGLARRRDRDGALFLSRDLVTTGERLREDFELA QLATGDATGWDQAAIGQVPALRADAAPAAKAAYDRVRAALADLGPGLGDVVLRCCCLL EGLEQTEKTMGWSARSGKIVLRIALDRLARHYAQTQGRYGPLIG" gene 990038..990376 /locus_tag="SKA53_04923" CDS 990038..990376 /locus_tag="SKA53_04923" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLDVMTLIRNLRRPTLLARAARFGADDYRRDAVLPRLLKTEKVP RPAAAVIALLDLEAATEAKRRAKAGDYSPARHVELLIAITGEARMLTATAPRAVQAKA SGMDAFFSAT" gene complement(990331..991881) /locus_tag="SKA53_04928" CDS complement(990331..991881) /locus_tag="SKA53_04928" /note="COG5598 Trimethylamine:corrinoid methyltransferase" /codon_start=1 /transl_table=11 /product="trimethylamine methyltransferase family protein" /db_xref="CDD:25126" /translation="MSDASVISPRRARGGGGAARRAERTAVSVETAKYIERNIPNYEV LTEEALQVIEANAETVLAEIGVNFVDNPAALDLWRAAGAEIDGERVRIPRGLARKLCA TAPSEYVQHARNPDRNVVVGGKNLVLAPVYGPPFVRDAEGGRRYATMADFEKFVKLGY MSKWLHHSGGTVCEPTDIPVNKRHLDMLLAHMVLSDKPFMGSVTEPSRAQDSIEMCEI LFGADFVRDNTVMTSLININSPLTFDSVMMGALEVFARHNQASIISPFIVGGAMAPVS VAGTLTQVLAEVMAGVAYSQLVRPGAPVVFGTFVASIDMNSGAPTFGTPEASQITYGA GQLARRMGLPYRSAGSFCGSKLPDAQAAYETAHSLNMGLLSGVNFMLHACGWLEGGLV ASFEKFVMDADQLGTLHHFARGVDMSENGQAMDALAEVGPGGHFLGCEHTQSNFKAAF WRSDLFDYKPFETWDEEGARDTVALASARVKKLIDTYQQPPLDPEIEARLRAYVAEKK ASMPDAFA" gene 992032..993591 /locus_tag="SKA53_04933" CDS 992032..993591 /locus_tag="SKA53_04933" /note="COG0518 GMP synthase - Glutamine amidotransferase domain" /codon_start=1 /transl_table=11 /product="GMP synthase (glutamine-hydrolyzing)" /db_xref="CDD:10390" /translation="MENSTYERLLIIDFGSQVTQLIARRLRELNVYCEIHPFNKVTDA FLTEFAPKAVIFSGGPASVFADGAPMPPQSVFDLGVPILGICYGQQVMMHVLGGKVER GHGTAEFGRAFVTPVEKLDLLDGWFLTEREQVWMSHGDHVSAIAPGFAVYGTSPNAPF AITADVKRHFYAVQFHPEVHHTPNGARLYENFVRIAGFSGDWTMSAYREQAIAAIREQ VGDKQVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLLRQGEAEEVVTMFRDHYQ MPLIHADEKELFLGKLDGVSDPETKRKIIGGLFIDVFQKYANGIEGAEFLAQGTLYPD VIESVSFSGGPSVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGAELGLPPSFI GRHPFPGPGLAIRCPGEITREKLDILRKADAVFIDQIRKHGLYDDIWQAFVAILPVRT VGVMGDGRTYDFACALRAVTSVDGMTADYYPFTHDFLGETATRIINEVQGINRVTYDI TSKPPGTIEWE" gene 994144..994356 /locus_tag="SKA53_04938" CDS 994144..994356 /locus_tag="SKA53_04938" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPLACFRISGCTCCDTQIAMNTAEAAALLSALVDGHRIMKMGQH DNQNVVRWTVKDLPRPKPDEVEDDAH" gene 995215..995520 /locus_tag="SKA53_04943" CDS 995215..995520 /locus_tag="SKA53_04943" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MEQNAVNNKIAGLRNMLWQMEVEFGLEKLSQPQKDVFYAACLAA DDDQLVHSDTIKRHPILSLMSRPTFYRALKELVDKDLMKREGPRKDGRYLVNARLPL" gene 995517..996077 /locus_tag="SKA53_04948" CDS 995517..996077 /locus_tag="SKA53_04948" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKYSLIKNLLIELMLVSLLYIAAFALTFGLLMPAQRMVLPEFAN YASILFLPHGVRVLTAWLFGLRAVLLLAPGGLLTHGFLHGTAGFSIDYFFAALFGIIC ATSTFWLFATMRMDFHRERAKTISWREILLAGSFASVINVAGTSYFYGSDIQSSSAYF IGDLGGLLACMVILMFGFRWIRRARP" gene complement(996611..997126) /locus_tag="SKA53_04953" CDS complement(996611..997126) /locus_tag="SKA53_04953" /note="COG0250 Transcription antiterminator" /codon_start=1 /transl_table=11 /product="transcriptional activator RfaH" /db_xref="CDD:10125" /translation="MTHPDDTAAWHIAQLRPNGLLMALRNLERQSVAHFAPTELRTER RGAKFVTRDVPAFPGYVFVQPSAASGGVRAVNSTRGITKLVTLGQGPAIVPAGLIAAL RIRFAPPDITPAPQFDQGDWVRILDGPFAEFVAQVEATPAAERVYLLIDLMGRATRVA VDARSLKREVS" gene complement(997360..997989) /locus_tag="SKA53_04958" CDS complement(997360..997989) /locus_tag="SKA53_04958" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTRKGVTARNRANAASSTGPKTAEGRAVSAMNARRHGATGKPDQ ALAARYLSVILDQPQISLGDLVAPDEATQKAIALAQAEARLVAAQNALAAFEAQASGT NPQGFGGADAIEEAATFWLNDIGSSEKSRRRDALRRIAVLEGCIRQQKKQRVPNPART QRLLMRYVSEAKAARGRALTAWLATESEPAPRVGTGQKRNLPKRSQIQR" gene complement(997986..998666) /locus_tag="SKA53_04963" CDS complement(997986..998666) /locus_tag="SKA53_04963" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPKQPKLPDPARFGIQSFAELLSTRPAVLGEVAGSFDPFREGLI ASLIPVTPYECVVAENLIAIEWELVQRRRMYNAEMREDLRFRIKRAVEAHYKVIHDAA LDADWRAFIDAGGYKNDWQEPHLPNKDVADAFKRTLDDRCMTNDPVALTELEADLAAM GIFTVTLMSAAYASTSGTLAKHDAKIPELERRRREVRRDYDALQSARPLEHLRADHDI PDAEVISP" gene complement(998857..999132) /locus_tag="SKA53_04968" CDS complement(998857..999132) /locus_tag="SKA53_04968" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMPKVSKEQVGILTSEQIRAARAALGLTTQVIAASTEIGLATIK RYEATSGVPKSRKGYLVQLKAYFEAHGIEFIGTPDDRPGIRVDTPRR" gene 999142..1000047 /locus_tag="SKA53_04973" CDS 999142..1000047 /locus_tag="SKA53_04973" /note="COG4973 Site-specific recombinase XerC" /codon_start=1 /transl_table=11 /product="Site-specific recombinase XerD-like" /db_xref="CDD:27720" /translation="MKKLAESDWRTEFSRLEGAFSPHTLRAYYTDIAAFVDWCEKLEL EWLPTTSEILCRHLNWMAHRGLKFTTIRRRLYAVRRLNMIMDAPELTRDLGVDLTVRR IRRAQPNRPGQARGLTGDVLKRMIYAQPDNPWGLRNKAILSLGYDLLARRSEITALRT DDVTWRPDGTLEVIVRRSKADPFGMGRLAFTSQRSAELVGEWLAWRGPEIGPLFCGIY QGVAIDRALSGASVKLVVKNAARAVGYDESIVGEFSAHSLRVGAAQDLLKKGHDTAAI MRAGGWSSVTVLGRYLAKAEHNVWA" gene complement(1000164..1001690) /locus_tag="SKA53_04978" CDS complement(1000164..1001690) /locus_tag="SKA53_04978" /note="COG3436 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="Unknown protein encoded by ISEc8 within prophage" /db_xref="CDD:3544" /translation="MLDAFKSLPEDPDELRAVSAQMLQHIQSQAYQIEKLKAELHGHR KARFGSKSEGIDQLALDLPEDDEIAQAAEDQRTEPSPGDEEDPLNKRQHSRKPLPDHL DRHDEVLSPGEACTGCGSTLRQVGEDITQELDYIPGHFIVRRFIRPRMACTCCEAFAQ APLPSRLIERGRPGPGFVAHMLVGKYCDHLPLERQSKIYAREGVDLHRSSLSDWVGRT TALLEPLAEHIGKLVRAGPALFADDTPVKLQVCANTTKTKTARLWSYVRDERPWCGAS PPCAWYLFSVDRKGEHPANHLAGYTGTVHADGFAGFNGLFGVGKADEQACIVHVRRKF VDEVERTGSPIAQQAIKQIAQLYAVEKEARGKSPQERVTLRQAKAKPVFDVLEIWLQA QLRKISGKTKLAEAIRYALNRMPKARGYLSDGQLELDNNTCERSIRPIALGRKNYLFM GSIGGGKAAAIAYTLIETAKMNNVDPEAWLTWVLQRLPDHKINRIDELMPWNWRAENA " gene complement(1001769..1002116) /locus_tag="SKA53_04983" CDS complement(1001769..1002116) /locus_tag="SKA53_04983" /note="COG3436 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="70 kDa peroxisomal membrane protein" /db_xref="CDD:23941" /translation="MIPVPSNTRVWLAAGVTDMRRGFNTLAAPAEQVLAEDLYSGHMF VFRGRRGDLLKIIWWDTQGACLFTKRLEQGRFVWPAAKEGKVSLSSSQLSMLLEGLDW RTPQKTWRPLVAG" gene complement(1002113..1002175) /locus_tag="SKA53_04988" CDS complement(1002113..1002175) /locus_tag="SKA53_04988" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVAGATALSAIVAMVEAVAQ" gene 1002327..1002701 /locus_tag="SKA53_04993" CDS 1002327..1002701 /locus_tag="SKA53_04993" /note="COG2963 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase" /db_xref="CDD:23225" /translation="MMKKPETSKDAADKLVKNIRRKTRQTYSAEEKIRIVLAGLRGEE SISVLCRREGIAESLYYSWSKEFLEAGKRRLSGDTARQATSLEVKDLRSEALALKECV ADLTLENRLLKKSMTGAGEAQE" gene 1002698..1003678 /locus_tag="SKA53_04998" CDS 1002698..1003678 /locus_tag="SKA53_04998" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="helix-turn-helix, Fis-type" /db_xref="CDD:25582" /translation="MRYHASEKLEIIRTVEGSHLPTKKTLDMLGIPRTTFYRWYDRYL EGGFDALADHSPRPRSIWNRIPQDRRDDLIEFALEHEALTTRELAVKYTDEKRYFISE SSAYRILKAADLITAPDYVVIKAAEEFTDKTTAINEMWQTDFTYFKIIGWGWYYLSTI LDDYSRYLIAWKLCTNMRAEDVTDTIELALTASGCDQAVLRHKPRLLSDNGSCDISGD LAEWLEGQKMKHIRSAPFHPQTQGKIERWHQTMKNRILLENYYLPGDLERQIGAFVEY YNNQRYHESLNNVTPADVYFGRDKAILHEREKIKKQTIHQRRLQHRKQAA" gene complement(1003993..1005195) /locus_tag="SKA53_05003" CDS complement(1003993..1005195) /locus_tag="SKA53_05003" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGWFVLLVVASGFLAFAQDFLLGSLFPVQVALRVLLLVQILYIL AIGRFGTQQLPSMLVFPIVLLSISMLATLLLQLVDGADLSRTLRAFYFMFGIGVFIAF LPFVPLSIERIPLFATFTVACVLFGTLQVLSQDLFLSEALLTEFGLVYVLFTSGSVRA VSFFNSAPRFAEFLVFVLCWLLFDIVSRRRLIFLKLMMYGVCLWLLFNTFSRSGYILF VVATAVVVFGAQRQIFGGRDIRGLLGRLFAVIALALSLAAVVGFVDFERLGITDSTSL KARFDHWRVLQERVAGFTLLQYLFGSGEAAMFSRSELEYFVVDNLFIALFLYSGLFAL FAFLLLVASTIIVISTIMHSKSASRMLPALALYVGLIFQGFFVDNHNTIFLVQICLLG MIRAKWPT" gene complement(1005258..1006580) /locus_tag="SKA53_05008" CDS complement(1005258..1006580) /locus_tag="SKA53_05008" /note="COG2244 Membrane protein involved in the export of O-antigen and teichoic acid" /codon_start=1 /transl_table=11 /product="probable polysaccharide biosynthesis related protein" /db_xref="CDD:11950" /translation="MLKRFSLTALVRILGAGANLVLMLAITWLTGAVEAGIFLFGYSI MTILATVSRLGSELSGLREVAALHDSGTPEQVSRAVRVRIILTTALSISFAGLFALVF APFAEARFGGDHTSTSIVLLGLGLPALALLGLFTEFLKAVDRATIAVLYQNTTVPGFT VVGLGAAALVQPVGASATAAAMLIATWITLGLAALTFLKWWRTQPIQLGTVERSVVMG DFIQILRDAPALVVVSSTSIIMQWIGSVLLGFLADARHVAGFSVAVRLSITVSIVNSA VISVMSPRMAAAHSAGNIAVLRRLAQQTSLVIMAITAPVLLSIYAFAGFWLSFFGPDF ASYAAELRVLVLGQVIAAAIGHSGTVLVMANLYREARFTSIVASLSLVATMLFAIPFF GTLGASAALSFAVVAGHLAGVILTRRNLNFWTVPTEYGDVLYAIRGSS" gene complement(1006585..1007592) /locus_tag="SKA53_05013" CDS complement(1006585..1007592) /locus_tag="SKA53_05013" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="glycosyl transferase" /db_xref="CDD:25539" /translation="MSRIDPGVKQVADASWAAGPTVDVVMPVYNGAAYLQEQVASILA QSDVTVRLIAVDDASTDESFALLNQLAAQDPRIKVLRNQTNVGLMRSLSLLLHEVTAQ YFALSDQDDIWDNDKLSRSISVLRAQNAALVYSDVRLIDAAGNLLRERYLAPMGIRPL QGRDPVAFIFRNPAIGHTMVGTSKLARAVREIDPSLVAHEVWIIAAACKLGDVVFLDA PLGSYRQHGRNVTGARTHTMKRIARLFGRNGTLWRRQQTRIRAIRALAPTHPALAPIA DAQARHGLQRLLGLPGFTAFMLGLAPRIGVFPALTEIALFPFAATPTLSSGAPRRVPS K" gene complement(1007579..1008673) /locus_tag="SKA53_05018" CDS complement(1007579..1008673) /locus_tag="SKA53_05018" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKTKSEKSRLIFQTIGWPIGTGTATPSPENLEEITEFAFKSRVG LLFLDECVKRGVALGPKAIELHASLMARRRETDRVVAKLARRLDEAAPGEWTLFKSIK PFASTPNDTDWFPFDAKRHKALCDHLCAPGGGFKWMETAPLQTTLIEEGGEGVVDTTK KGGVYYIDCYVSPSTDYFIYLDPRRMRGMTEIADVAGYPVPVLQPHAELTAILFHNVF PEKSFTIESYYLVKCYLDLMEERGTLDAFVDVCREQKVDYASAVNLYLVQQIDRAQFN QVDTRITRILEGLGRSKTIVPGFNPAGAFPYEFPASVFWGAFLSKQRDRTSFASTLNQ FFHMLNPIFLSDVIRIVWRRTVKGGVYEQN" gene complement(1008670..1010568) /locus_tag="SKA53_05023" CDS complement(1008670..1010568) /locus_tag="SKA53_05023" /note="COG0438 Glycosyltransferase" /codon_start=1 /transl_table=11 /product="Glycosyl transferase, group 1" /db_xref="CDD:7651" /translation="MNRLVCIIGTDGSGKTTLSDALVERLQGRGERARRVWLGSESYL MAPVRAALKLVWDRRRGKGKSHGPKPGLASQRVDYAAEIAQKNALAARHPFAVRVYLA MVWFDYWLQLWIKRLGLRDAGTIVADRYLFDVAVNVGLALGWSPEEVVRYAQTQICRI PLPEVRVFLRVEPEVSMARKDDVFDIHYVRMRLHYYDAIAEAFGFTVRDGTLPIAENA DWLADQVAAESTRPYVLYVHSNNVDVGGADKVLALMARHMRDQGRPAHGCRVAVALRL ATPILDSHAEAGVPVFLFPFERPQTSRGIAGVARLILRTPGSLWFFWCLFGRERPDIV HVNDLYDFLPALAARLRGIPVVWHIRMIVQRDRLRRAFSSMISRLSGTSISVSRAVRD HYFPFAHTIHRALVIHDLGNAALIADDRDPAETCARPDDLPKGGRLVVMVGRIEPWKG QHVFLEAVEKLSPIRRADAVFALAGGPVQGKEEYHDQVSRRATSAGVLLLGERSDIPA LLRSADISVHTSVSPDPFPGVVIESLLSGAATIAAAAGGAVEMIDDGVHGRLCPPGDS KALAAALSDLLDEPQSPRRRFGANARSRALMLVDSKVVDAAVMSVYSDIVARDRNNRR THQNGRSA" gene complement(1010565..1011539) /locus_tag="SKA53_05028" CDS complement(1010565..1011539) /locus_tag="SKA53_05028" /note="COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family" /codon_start=1 /transl_table=11 /product="glycosyl hydrolase domain protein" /db_xref="CDD:7651" /translation="MRMTVVAEYYDEPAEGINVVSKTLIDGMRARGHEVAVIPPAVAL SRLPRLLLKPAPVTIFTHGPGPRTVLVSRILRSLSRTRILWVATRPDLGACPRWLCGG RSAHAILCNRPRADLAGVASDARMLTQPIGIAPERLVDGGQAPVWAARRRDGVPLAVH VGHLRRSRGLDRLCEIKALLGDRIDIVVVASPYFESDPCLMAELLAAGVHIDRGFVPA IADVYRAADLYLFTPPPETEGAIELPLGVLEALACGLPVISTPFGALPEVLAGTVGVE FAPSEDFAQAVVHWVDRGAANPRPAGLPNHLNAHRITERVLELASGTE" gene complement(1011555..1012496) /locus_tag="SKA53_05033" CDS complement(1011555..1012496) /locus_tag="SKA53_05033" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10431" /translation="MIARQLVVFCDLDGTLVLDNSFHVFLASAWSLSGAGGRLNLFAR VAPRALGRVGGGHAGMKRRALDWYWQQEPPLRQAIVERTVRRLSYTLSQPVISLLRDT ARQGARIVLATAAPDVYTGHMQVLVGAESCLATPGRPGPGWQELLGEAKARACQTWLK DNTNSDGGHDVIVVTDHPDDLPLLRLADKAVLQGSPRVLDMLEGAIRAQPDGARTEVA RIDVLSAQAPGGGYWLWFDDRPEGPLDYWELKTILSKHRHAHLYAGDGRWQWIGPAQP FSAAVRRRDCPSPPSSRMRLAIHFRRRLLRDWLGIYH" gene complement(1012493..1013119) /locus_tag="SKA53_05038" CDS complement(1012493..1013119) /locus_tag="SKA53_05038" /note="COG2236 Predicted phosphoribosyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11942" /translation="MGVKSGNKAARRILTLDQDALQSDMERLLGLVKDAGERPDLLVG VATGGELCGRLISEHFPAGLISVVMRRPSTSYKKTTLIKIVLSSLPYAITNLFRGVED ALLERYTKKVPISVPTDELRRDIAVVAAAVERQGLQSVLVVDDAIDSGATLACIVAEL KAALPSNVRIITAVLTQTRPTPAISADFRLYDCVMLRFPWSLDFRGRE" gene 1013255..1013521 /locus_tag="SKA53_05043" CDS 1013255..1013521 /locus_tag="SKA53_05043" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:23225" /translation="MKRSSFTEEKIIGILREQEAGAKTADLCPRHGISSATFCAWKAK FGGMEVSDAKRLKALEEENARLKQLIAESRLDHTALKDLLSRKW" gene complement(1013696..1014685) /locus_tag="SKA53_05048" CDS complement(1013696..1014685) /locus_tag="SKA53_05048" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="epimerase/dehydratase, putative" /db_xref="CDD:10325" /translation="MKIMSENQSMPSKIIVFGGAGFIGTHLIRALHGSGENDIVCIDR ADPRERLDGVTYMKADVRNLDGFSTHGPIARIYDLAALCVIPKYQDHEYYDVNVNGAI SVTGFAERHGVVDVVFVSSMATYGTGEDRKSEQTPQTPENAYGWSKLIAERVYLSWLQ RDTNRKLVICRPAVIFGHGEGGNFTRLAKLVKWGLFVFPGRKDTKKACYYVKHLVDDL NFAANWGERLAIFNACYDHVYTIENIVRAFEEAGVGKLRTLLMPETILIIAAHLLQPF NLLGLEIHPDRIRKLTNSTNLKPAWLRAHDRVRTDELTSAIVDWKVETDGRMN" gene complement(1014700..1014927) /locus_tag="SKA53_05053" CDS complement(1014700..1014927) /locus_tag="SKA53_05053" /note="COG3293 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="putative transposase" /db_xref="CDD:12627" /translation="MDARDALTQIPLRKSRRMRIGIDHSLYSLLNLVERCFNKLKNAR RVATRYDKTAESFLGFIDIVSIHLWVRLLST" gene complement(1014982..1015059) /locus_tag="SKA53_05058" CDS complement(1014982..1015059) /locus_tag="SKA53_05058" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRTEITPGKTSDYLGFDLVMTDNLP" gene complement(1015056..1015487) /locus_tag="SKA53_05063" CDS complement(1015056..1015487) /locus_tag="SKA53_05063" /note="COG3293 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase" /db_xref="CDD:12627" /translation="METSLARDLMSDEEWAFFERFILSVRAPNGRKPTNHRLVLDGIF WTARTGAPWRDLPEEFGKWSSDYRQFRRWTLAGLWEGTMDALNQSGAVPDALQMIDST VIRAHHQAAGAKGGLRDRVLAAQEVALRPRSTSASMQPACP" gene complement(1015593..1016930) /locus_tag="SKA53_05068" CDS complement(1015593..1016930) /locus_tag="SKA53_05068" /note="COG1004 Predicted UDP-glucose 6-dehydrogenase" /codon_start=1 /transl_table=11 /product="UDP-glucose 6-dehydrogenase" /db_xref="CDD:10733" /translation="MRIVVIGTGYVGLVSGVGLSHLGHDVVCVDNNATKIAMLRQGKV PIYEPGLQELLASNVEAGRLSFSTDLPSAVDGADVIFIAVGTPMKDDDGHADLSYVMA AVEEVAHALTGYAVIVTKSTVPVGTNRKIKQIIAQANPQAECDVASNPEFLRQGMAID DFMRPDRIVVGVQTERAGNILDHMYSSLQLRNVPIITTDLESAELIKYASNAFLATKI SFINEIAALCERVGADVEEVSKGMGLDERIGKKFLRAGPGYGGSCFPKDTRALANSGR EHRAPQSIVETVIRVNDDVKQRMVEKLRMMCDGSFAGKIVTVFGVTFKPHTDDMRDAS SLTIVPALLEGGAEVRVVDIIGRLQGEALLPGVVWHDDPYIAAHDADLVVVLTEWDEF YGLDLKKLARNMKSPHMADLHNIYSLRDAKCAGFEAYECVGQARLSQITDQAL" gene complement(1016942..1017778) /locus_tag="SKA53_05073" CDS complement(1016942..1017778) /locus_tag="SKA53_05073" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="putative dTDP-glucose 4,6-dehydratase protein" /db_xref="CDD:23188" /translation="MGHERFDLVEHDITLPIDLNVDEIYNLACPASPPRYQSDPIKTN KTSVLGAINMLDLAHKRGARILQASTSEVYGDPEVHPQSESYWGNVNPIGLRSCYDEG KRCAETLFFDYKRQLGVDIRVARIFNTYGPRMDPSDGRVVSNFIVQALLGHDLTIYGD GSQTRSFCYVDDMIEGLFALMNLPEAPETPINIGSQGEFTVLELAERVLDQTGANAKI AFKPLPIDDPTRRRPDTSAALNLLNWQANVPLEEGLAATAKSFVAQLGHLASPAIQSR EV" gene complement(1017970..1018638) /locus_tag="SKA53_05078" CDS complement(1017970..1018638) /locus_tag="SKA53_05078" /note="COG2148 Sugar transferases involved in lipopolysaccharide synthesis" /codon_start=1 /transl_table=11 /product="undecaprenyl-phosphate galactosephosphotransferase" /db_xref="CDD:11856" /translation="MDGGHKREEAIAVAEPHVVAIPRETFYVRYGKRAMDVALAGSLC IVLLPILITIAIAIRLSGRGSVLFTQTRHGLGQRAFKIYKFRTMTVSEDGTAFKQAVH NDRRVTSVGAVLRRTSLDELPQLINVLNGTMSVIGPRPHPTALDAAFVPLMPDYVGRF AVRPGITGLAQIRGLRGPTETTGAMAARVASDIEYASNVTWVNDIKILLATARVVFGD RNAF" gene complement(1018642..1019457) /locus_tag="SKA53_05083" CDS complement(1018642..1019457) /locus_tag="SKA53_05083" /note="COG1210 UDP-glucose pyrophosphorylase" /codon_start=1 /transl_table=11 /product="putative UTP--glucose-1-phosphate uridylyltransferase" /db_xref="CDD:10928" /translation="MPKELLPIIDRPIIQYAVEEALAAGITKFVFVTGRTKRAIADHF DAAPELERALEKAGKHDLAAAVRDTLPDHVHAVYIRQRIPLGLGHAVLCARPALGEEP FAVLLADDFIMPSPRATNPTAVLSLAYAASGRSQVLLQDVPPTEAHKYGIAIRGADDE SIAGLVEKPDPGQAPSTLASIGRYVFHPEIFDVLAALGPGRGGEIQLADAIDILARGG RVGALPLDGTRHDCGTHLGYLGAIVAAESSHPEFGGEFRALMAASLSPSGAGV" gene complement(1019535..1020548) /locus_tag="SKA53_05088" CDS complement(1019535..1020548) /locus_tag="SKA53_05088" /note="COG1652 Uncharacterized protein containing LysM domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:5361" /translation="MASAAAAQETYTVQQGDTLASIARQIAGVPVSWDDLCRINRSTI ENCDLLRAGVVIALPEGARISDEATGNAVGNVMGARLGEPLRLGAGPTIETVEPVDSL SLTLGGNLDDAALQGADASLAAFFGDQVTEEPDTTVQEILEAVMAEPVIVPDEVLMAA APAADEVADVTDTAVADADETPAETLTVGTVAYGANARPMAFRSYHGHEMTDEGGAVR ISGHVPGLYSTGTTGGAFIRLDDEFEADAAANVVRVSVTMSGPEGARAALAYSTNDLG NSGWQSFILTAPPTTHSFEYAVPPLAHGSGDFLGIDPDPDGAGHAILVHAILLEILES DPN" gene 1021246..1022100 /locus_tag="SKA53_05093" CDS 1021246..1022100 /locus_tag="SKA53_05093" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIKQLTMATALVTVLASASFAQTAAESAQFETAIASAEAACASG GTSCAALMEVAIAAIVAAPVPAAARIQLVASAAARVTQSLPASMASNIVAEITAAAGR QATDAANSIVASAPPAEQAAALAAVPAAIERVSTSATNKAAERPEIAAQVASSVIEQI ARAPMTAAARIDAVSRAATQVTEALPASASSAVVSASITVVLEAAAAATRSVAAAAPA SEAAAVQAAVATGSATIRNAAAGQAARRPDIASTIASVVEVTSPAATGPTNVQGPVSV QAPAASPT" gene complement(1022474..1023040) /locus_tag="SKA53_05098" CDS complement(1022474..1023040) /locus_tag="SKA53_05098" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTFSLPAFLCVTAAYIGSFVLVILLIAPVQKTVFPQGFELGSLI FLPHGVRILSFLFFGWMGFIYLLPGSVLMWIVLAYGAGQVGYHISGTAVSLISCYVAV TLACRLFKNVWASSGRFSWQQVMIAGVFGSVMSAAGFSALNFSPPSLLIMLSHIIGDV IGLFVILFLLMIMFRQIDRFLTKTHRLN" gene complement(1023195..1025333) /locus_tag="SKA53_05103" CDS complement(1023195..1025333) /locus_tag="SKA53_05103" /note="COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12544" /translation="MTNQDIPRGDDQIDISAFIGVLRRQYRVIVMSVASIIVLAVIYL FAVTPKYTATALVSIEPNRGVLSEDVASQNNSAAISAQVEGEVAILKSSDVLLALIAE ANLVSDPEFGVTVSRSAQVMAWLGIETDTTREAGAAVTDILRRVGDAVAVRRRGLTYL VEVSVTSQDPERAAELANLLVSIYTTRQVENKIRQILASRDILAPRIDNAQAELERLQ TEADRFLENVVADFVENSDREDLIGVRDRFSLAQGQLDGLRQQSAALRAIVEGRGVMA DQSDLLSAAVLELASQREALQRQLETDPSASGIDAAALRAELANVDNRLREMAARDRD ASLAGISDLTQVAERARAELREAALASDLPSADLSMFYRLQQESATARIDYENLLRRL RQLETLADVQISDAVMASSAVMPSNPSFPNSRLILALAIVASFGVGVGLAFINEFLIG GVTSEDQLRELLNAPVALPVPAISTPEEGDVTSQIWQAPMSGFSESLRQVRRQAARLT RPGEGGRIYLFTSAVPEEGKTTAAIAFARTLALSGTKTLLVDFDLRKPSIAHRIGAPA STALLDTLSGRATDADLAGCHFHEAETGLDILVGGGRSDLPTDTLVSSTRTVQFLYKL RKEFDAIVIDTAPVLPVVDTLYLTPYADLVVMMVRYAATNQRDVKRAAERIRGDMHAG VHVLPVLSMERRGKKAYYYGGYYSGYGTPS" gene complement(1025330..1026142) /locus_tag="SKA53_05108" CDS complement(1025330..1026142) /locus_tag="SKA53_05108" /note="COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases" /codon_start=1 /transl_table=11 /product="serine/threonine protein phosphatase I" /db_xref="CDD:25415" /translation="MRDMMSFFKRRPAPIAPSFWQDLQPPEAIYAIGDVHGRRDLLAA LEAVLAQDWTQRRYRDVVLLYLGDLIDRGPHSAHVLDHLTAPAPKGVRRLTLLGNHEE MFLAFVDRPEANIAWLDHGGGATLNSYGIYLTKSDILQMPRKKVLQYLSASIPSTHLD TLRRAPRAVRSGDWRFTHAGLDPAKTDEAQTAADLTWGVAGDVTALSQGAGRLVFGHF AADQLRTIGQTSCIDTGAYATDRLTALRVTPGTSDASTEFFEVYNPDRTTRQ" gene complement(1026139..1027485) /locus_tag="SKA53_05113" CDS complement(1026139..1027485) /locus_tag="SKA53_05113" /note="COG3307 Lipid A core - O-antigen ligase and related enzymes" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26307" /translation="MDKAISGIRTQWPVRLAAAICLAVVVIAPMAVGGFRPHWWLMFA SVLFFAAALATYSLARSNRHVRFLTHGVPGLAPLYLVFLVGLCLHVVLVGGAASDTDA IYGLIRQLSYAALGWTLLQALTRGQRAVDYATVLVIGFLFYAVYGLITIDRTEWLFFE KTSYLGVATGPFVNRNSFATFLAIGMSLTLASALADDTGVGRQHRSGHRASPLEGRMR SLVLATVALLCLAAIFATASRMGLFVALVGASVVVILRLRRIVGRTGLAGIVALALGI LGGLSLIMVALLYGGAVTERLGSTADSASVRIDLYLNILDMIRANPLLGVGLGNFGEA FRAYQRLPVSPDRDWHLAHNTYLALWSELGIVLGSLPILLVGLVALALLRRSLSKIVT PVSHLSDAALAAVVIVGLHSLLDFSLEMPANAYLFVAVIVLGLAPNSSSLSRGAKG" gene complement(1027478..1028122) /locus_tag="SKA53_05118" CDS complement(1027478..1028122) /locus_tag="SKA53_05118" /note="COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVVLVTLGTVSAGLASRELSAAFVDPDENGSAVVFWTVPPVVLP VSSGSRHQRRLLSSCLFLLTAQQFSFQAAEVQQETTANCAMQARHARASGLELSEIYA VLAFEHLAAGDLVGVDRMLRHSVTLAPTDLAMIVYRIRIGFLAFSPQELTQNGGLLER ELPVLIGSGRGVTVAASLYAQVPDLRPIVDRIADALPALDRQRFLDALRREIRG" gene 1028291..1029073 /locus_tag="SKA53_05123" CDS 1028291..1029073 /locus_tag="SKA53_05123" /note="COG2252 Permeases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MEPVAGIGAGFAQAILGIADLLKGTSAPGMVALALFGATGGMML AAQILFWRACSYPKDLTYVLKREQRPITRALVTGLHIPLPKRNYGPVSARQMRVWTAF CDEFLYTSDASGRAASPIDPALALSREALGLRLGIWRIVPGTLVGIGLVLTFLGLIAA LREAGVSITASGSDPDMVKKALSDLLTIASAKFIMSLAGLTGSIVFGVFLKAWEVRLE TIATALSDEVRSRLDVVTPERTLQQLLASSHRLEGLLRTAKI" gene 1029073..1029903 /locus_tag="SKA53_05128" CDS 1029073..1029903 /locus_tag="SKA53_05128" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFQRRVINDHDEEESIFISMTDLTVSMMLLLVILLGFFASQFRS ASLFDQAEQISEEVSALRLAAAQKDRDIRVLTQSMAAVQAALLTSQAERLALQEKLLA ADTAAIAQAARFTEQMAAQQAETAALRSETTALEQKVAGVEGERDRAQSALAQATAEF EDSLTIALSNAAELAARLQTSEALLAAERARAVAREDDLARATEALSVQQANNLASDQ LRLAHNTLEKEVIAEAAKVAALQSELQALETLLSAVIQSTILLLDNRAPKRPTAPLSK " gene complement(1030018..1030119) /locus_tag="SKA53_05133" CDS complement(1030018..1030119) /locus_tag="SKA53_05133" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLNAVILSKDMCHIKIQIETYLVDAGRIELMRP" gene 1030197..1030499 /locus_tag="SKA53_05138" CDS 1030197..1030499 /locus_tag="SKA53_05138" /note="COG3355 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMVEAVTNGLKRLADLRQLLLDMERDFGLDGLPEQETRLLYAVA IQTRTKSEVSLAELQAHPLTTDISRSTFFRALKHLAECGYIEKTSVEKRAGYKLLK" gene 1030794..1031096 /locus_tag="SKA53_05143" CDS 1030794..1031096 /locus_tag="SKA53_05143" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTRPMVVARHALGQKHIAFKHSVNVAHDVEPVRHQIATTKARTG PKGDKVLLLFKYLVHPTGFEPVTSAFGGQRSIQLSYGCGHIFYSDPATGSQCKNIS" gene complement(1030966..1031039) /locus_tag="SKA53_t05596" tRNA complement(1030966..1031039) /locus_tag="SKA53_t05596" /product="tRNA-Arg" gene complement(1031089..1032312) /locus_tag="SKA53_05148" CDS complement(1031089..1032312) /locus_tag="SKA53_05148" /note="COG0520 Selenocysteine lyase" /codon_start=1 /transl_table=11 /product="cysteine desulfurase SufS" /db_xref="CDD:10391" /translation="MTLDIAKVRADFPILSRQVNGKPLVYLDNGASAQKPQVVIDAVT QAYAHEYANVHRGLHYLSNLATEKYEAVRGTIARFLNAASEDEIIMNSGTTEGINMVA YGWAMPRMEAGDEIVLSIMEHHANIVPWHFLRERQGVVIKWVDVDTRGDLDPQKVIDA IGPKTKLVAVTHMSNVLGTVVDIAKITAGAHAKGVPVLVDGSQAAVHMPVDVQALGCD FYAITGHKLYGPSGSGAIYVRRERMAEMRPFMGGGDMIREVGRDSVTWNDPPMMFEAG TPGIVQMIGLGVALDYMTGLGMDKIAEHERQLRNYARDRLDGLNWVQVQGTSDTKGAI FSFTLNGAAHAHDISTVLDKKGVAVRAGSHCAMPLMDHIGVPATCRASFGLYNTVEEV DVLIDALELCHDLFS" gene complement(1032309..1032902) /locus_tag="SKA53_05153" CDS complement(1032309..1032902) /locus_tag="SKA53_05153" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNITMQSATRALWGAIIDPATAARLVLDWRLGLGNMWMALALVA VLNVLMLALLQAASPMPVMAQGGMMLTPFSYAMIITIFLFLLVYTIYHVGRMMGGQGT VEDSVTVIVMFQSISVALEAVQVLLVLISPQIASVFGLVSLAVLTRCMVNFVNVMHRF DSLGKSLATMIFAVIGTALIAGIVLTVLGIAPSGGQI" gene complement(1032899..1033402) /locus_tag="SKA53_05158" CDS complement(1032899..1033402) /locus_tag="SKA53_05158" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPVTTDIVRTWRAPRAVMRSILDQGRREDRAIAYLMIACFLIFI AQWPRLSRLAAGFDLAPGAEVPALDRLIAYEFVAWLMVWPLFLYFLAGTTHLVARVLG GKGTMFGARIALFWTMLATSPAILLHGMTRGFIGPGIETNIVGAFWLAAFAIIWVQSM REAESRP" gene complement(1033402..1034688) /locus_tag="SKA53_05163" CDS complement(1033402..1034688) /locus_tag="SKA53_05163" /note="COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component" /codon_start=1 /transl_table=11 /product="FeS assembly protein SufD" /db_xref="CDD:15353" /translation="MALAKLKQDATLARLAGITLPEGATWATAARSDALARLSAMGLP TRRDEYWRYTDPASLIVADAPPAALFDNGEAPLFAGVDRIALVFVDGVFDAAQSDDLA GAGIEIHRLADVAQRDIHWAKDLYGTLESRGQHPVERPLAALNTAIASDGIVIRATAK VQKPVHLVYLHQSETSDVTLHNLVRIEAGASLTLLETGPGAARLSTCLEVDIADAGQF HHIRAQGSDHERRAVTHCFAQLAAESVFKSFTLTFNGVLTRNECVIDMRGDDAVAHVA GACVGDGGDFHHDDTVFVTHDALRGESRQVFKKVLRNGAVGVFQGKILVKQGAQKTDG YQISQSLLLDDDSQFLAKPELEIYADDVACSHGSTTGAIDETALFYLRSRGVPMEAAR NLLTLSFLAEALAEIEDQALAEELQTRLEGWLARRA" gene complement(1033880..1033986) /locus_tag="SKA53_t05594" tRNA complement(0..1033929) /locus_tag="SKA53_t05594" /note="tRNA-Sup" gene complement(1034688..1035446) /locus_tag="SKA53_05168" CDS complement(1034688..1035446) /locus_tag="SKA53_05168" /note="COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component" /codon_start=1 /transl_table=11 /product="FeS assembly ATPase SufC" /db_xref="CDD:10270" /translation="MLEINNLHAELETDADVTILKGLTLSIKPGEVHAIMGPNGSGKS TLSYVLSGKDGYSVTAGSAMLEGVDLLEMEPEERAAAGLFLAFQYPVEIPGVGNMTFL RTAVNAQRKARGEEELSAGDFLKEVRAKAKDLQIDADMLKRPVNVGFSGGEKKRNEIL QMAMLEPKMCILDETDSGLDVDAMKLVADGVNALRSENRSFLVITHYQRLLDHIKPDF VHILADGKIIKSGGPELALEVENNGYADILAGAA" gene complement(1035472..1036995) /locus_tag="SKA53_05173" CDS complement(1035472..1036995) /locus_tag="SKA53_05173" /note="COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component" /codon_start=1 /transl_table=11 /product="FeS assembly protein SufB" /db_xref="CDD:15353" /translation="MTALDKIEVKEGVDQDTVDAVTALSGNYKYGWETEIEMDYAPKG VNPDIVRLISSKNEEPEWMTEWRLQAFTRWEKMNEPTWAMVSYPPIDFQDIYYYARPK SMAVKPKSLDDVDPKLLATYAKLGIPLKEQAILAGVEGAEDMPAEGRKVAVDAVFDSV SVGTTFQAELKKAGVIFCSISEAIRDHPELVKKYLGSVVPQSDNYYATLNSAVFSDGS FVYIPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPKRDVAQLH AAVVEIIIEEDAEVKYSTVQNWYPGDENGKGGIYNFVTKRADCRGDRAKVMWTQVETG SAVTWKYPSCILRGDDSQGEFYSIAIANNMQQADTGTKMVHLGKNTKSRIVSKGISAG KAQNTYRGLVSMHPKAKNSRNYTQCDSLLIGDQCGAHTVPYIEVKNNSSRVEHEATTS KVDDDQLFYCRSRGMDEEEAVALVVNGFCKEVLQALPMEFAMEAQALVAISLEGSVG" gene complement(1037006..1038037) /locus_tag="SKA53_05178" CDS complement(1037006..1038037) /locus_tag="SKA53_05178" /note="COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes" /codon_start=1 /transl_table=11 /product="putative aminotransferase" /db_xref="CDD:10826" /translation="MRVYLDHNATTPVRAEARAAMIAAMDAVGNPSSVHAEGRAAKAI VERARAQIAAAVGAGTADIVFTSGATEAAALALAGRGLQASLVEHDAVHAWVDPVLPV LAGRVQVVDAARSTVQLANSETGIVQDLPAGLAVSDITQGFGRVPFSYDWAGVQMVFL SAHKFGGPKGVGALILPRGHDLNAQLRGGGQEMGRRSGTENVIGIAGLGAAVAAAQAD LAAGRWEQIAQFRNILEMGIEAAEKNTIFVGKDLPRLPNTSCFVTSGWKGETQVMAMD LAGYAVSAGSACSSGKVKQSRVLRALGLDDDAAAGALRVSLGLETTEDQVLRFVQAWT EKRARLRAA" gene complement(1038113..1038574) /locus_tag="SKA53_05183" CDS complement(1038113..1038574) /locus_tag="SKA53_05183" /note="COG1959 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster assembly transcription factor IscR, putative" /db_xref="CDD:11667" /translation="MKLSTKGRYAMVALADLALQPADALVNLTEISKRQDISLPYLEQ LFVKLRRSGLVDSVRGPGGGYRLSRPASEIRVAEILGAVDETVSAMHKGAGASGGASG SRAQSLTNRLWEGLSAHVYVFLHQARLSDVVSNSLAPCPAVPALFEIVDED" gene 1038743..1039396 /locus_tag="SKA53_05188" CDS 1038743..1039396 /locus_tag="SKA53_05188" /note="COG2945 Predicted hydrolase of the alpha/beta superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12293" /translation="MPEVIFPGPEGRLEGRYHPQKDRDAPIAIVLHPHPQFGGTMNNR VVYNLHYAFYNLGFTVLRFNFRGVGRSQGEYDQGVGELSDAASALDYLQAMNNNAKHC WVAGFSFGAWIGMQLLMRRPEITGFISVSPPANMYDFSFLAPCPASGLVINGSSDRVA PPQDTVNLVNKLHEQKGITVTHDEVAGAGHFFEDPHMDPMIDTVKTYVRRRLTENTR" gene 1039400..1040029 /locus_tag="SKA53_05193" CDS 1039400..1040029 /locus_tag="SKA53_05193" /note="COG1896 Predicted hydrolases of HD superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11605" /translation="MANTPLDKRSAAPADRIAAQLAFLTEACKLKSVLRATTLCDGSR RENSGEHSWHIALYALVLGDQAQADVNIDRVIRMLLIHDLVEIDAGDMPVHGTHDAAA QAQIEQIAARRIFGLLPPDQAQDFRALWDEFEAAETPDAIFAKSIDRVQPVIANLETG GGTWPAYGVTAAQLETRVGAKVARGAPALWSALKHRIDAWFAARASSLE" gene 1040154..1042442 /locus_tag="SKA53_05198" CDS 1040154..1042442 /locus_tag="SKA53_05198" /note="COG0513 Superfamily II DNA and RNA helicases" /codon_start=1 /transl_table=11 /product="dead-box protein, atp-independent rna helicase" /db_xref="CDD:10384" /translation="MTTMIPTLAAALSAQGYTDLTPVQVAVTDAAVADQDLLVSAQTG SGKTVGFGLAIGPTILPEDGLFGPAGRPLALVIAPTRELALQVKRELQWLYAGTGAVL ASCVGGMDFRDEKRSLERGAQIVVATPGRLRDHIMRNTIDLSDIKAVILDEADEMLDL GFREDLEFILDQAPPSRRTLMFSATVPAAIAKLAQSYQKNAVRVASTSKESQHSDIEY RALTVANHDIDAAIINVLRFYDAPNAIVFANTRAMVTRLTTRLANRGFATVALSGELS QTERTHALQAMRDGRARVCVATDVAARGIDLPNLELVIHAELPTNAEILLHRSGRTGR AGRKGISAMIVPAKMKRRAQNLLTWGKLQATWALPPTADEVTAKDEDRLLTDPVWSET FTDSEQEFAARLLAQHAPEKIAAAYLRLYAGKQSAPEELSDYKDGPAAPDRKGDPDRP PRDHKSFGPSRWFRVDVGRDGKAEARWLLPMICKAGGITKTEIGAIRIQPDETFVEIS EPAVAGFLAAIGPDMVLENQAKLSAIDGAPQIGDRGPRTTKRDYDTPKPRRHAPQGQD APPPSAQADIAPIQPIPGAADDDQARKPRHKPGQKPERRDHGDALVAYGAKPAYKGKS DKPPYKDKSDDKPAWKGKSDSKPPYKAKSDDKPAYKGKSDGKPAYKGKSDDKPAWKGK SDSKPDGKPAWKGKPDDKKPGGFARAGKPSFGKPSFAKPDGKPRPSATDTTKRFTPPG GAAKPRKPAGKAGMTGPKRGKP" gene 1042638..1042979 /locus_tag="SKA53_05203" CDS 1042638..1042979 /locus_tag="SKA53_05203" /note="COG3070 Regulator of competence-specific genes" /codon_start=1 /transl_table=11 /product="TfoX domain protein" /db_xref="CDD:26319" /translation="MPALETIRNIGPAVAASLRAAGIMDSQTLQAIGADAAYARLLAN GARPHFIAYYVLHMALQGRPWNDCKGAEKDALRAQFDNLKARYCDSGQSELEKMLNQI GVVPAQKKPPA" gene complement(1043034..1043456) /locus_tag="SKA53_05208" CDS complement(1043034..1043456) /locus_tag="SKA53_05208" /note="COG0105 Nucleoside diphosphate kinase" /codon_start=1 /transl_table=11 /product="Nucleoside diphosphate kinase" /db_xref="CDD:24303" /translation="MAIQRTFSIIKPDATKRNLTGAIVAKFEEAGLRIVASKRIHLTL AQAQQFYGVHKDRPFFGELCEFMISEPIVVQVLEGEDAIAKNREVMGATNPADAAPGT IRKEFALSIGENSVHGSDAPETAAEEIAFFFSGLELVG" gene 1043594..1045447 /locus_tag="SKA53_05213" CDS 1043594..1045447 /locus_tag="SKA53_05213" /note="COG0488 ATPase components of ABC transporters with duplicated ATPase domains" /codon_start=1 /transl_table=11 /product="putative ABC transporter, fused ATPase subunits" /db_xref="CDD:10359" /translation="MLKISDLTYSVEGRTLVENATVTIPTGHKVGLVGRNGSGKTTLF RIIRGEMVLDTGSVSIPKGWKIGGVSQEVPGNEVSLIDTVLRADTEREALLAEAETAT DPSRIAEVQTRLADIDAWSAEARAATILKGLGFTHEEQQMPCSAFSGGWRMRVALAAV LFSEPDLLLLDEPTNYLDLEGALWLEAYLVKYPHTVLIVSHDRELLNRSVGGILHLEE KGLIYYTGTYDMFAKQRAEKRALMASAAKKQDAKRAHLQAFVDRFKAKASKAKQAQSR VKMLEKMETIRAPEDAARTVFTFPEPEELSPPIIATEGAAVGYGNTIVLHDLNLRIDQ DDRIALLGRNGEGKSTLSKMLSGRLDVARGKMVTSNKLRIGFFAQHQVDELYVDETPL QHLMRERASEGQARLRARLAGFGLGADQAETEVGRLSGGQKARLSLLLATLPAPHLLI LDEPTNHLDIESREALVEALTAYSGAVILVSHDMHLLSMVADRLWLVKGGHVTSYDDD LEAYRRLLLTPDKPAEKDKPKAKAAPKPTRDEILALRADVRKNEERVTKINEMRDKLA KKLADPALYEDTKAGELATWNKKYAEVMDGLNRAEAMWMASLEKLEKAQNA" gene 1045444..1046073 /locus_tag="SKA53_05218" CDS 1045444..1046073 /locus_tag="SKA53_05218" /note="COG2095 Multiple antibiotic transporter" /codon_start=1 /transl_table=11 /product="membrane protein, MarC family" /db_xref="CDD:2440" /translation="MTELPALIAAFTTMFIIMDPPGLVPVFIALTQGMSAEQRRAIAV RACIVAGVLMILFLFVGEAVLGFIGISMDAFRIAGGILLFLTALDMLFQRRQARRADN AAEGQAEHQDDPSVFPLALPLIVGPGAITTIILLAGNATSAADFGAIAGVLMAVLLIT FLAFLVAPTIERALGKTGLNIVTRVLGMLLAALAVQFVLDGLRGFGIGG" gene 1046091..1046669 /locus_tag="SKA53_05223" CDS 1046091..1046669 /locus_tag="SKA53_05223" /note="COG3577 Predicted aspartyl protease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12903" /translation="MTTDQIMQLTYLVLLGAAIGGSAIVAGRNNLGRMAQQAAIWVLI FIGVIGAYGLWGDISQNVTPRQTALSDGRIAMPRGTGGHYFVEIAVNDTPVRFIVDTG ASHVVLSERDARRVGIDPATLTYSGMAITANGAVRTAPVTLDTMTLGGITDGPVRAVV NGGDMQDSLLGMSYLGLYDRIEISDGTMVLTR" gene 1046666..1046758 /locus_tag="SKA53_05228" CDS 1046666..1046758 /locus_tag="SKA53_05228" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit chi" /translation="MIRALTLILLLAACAPAPQLPKDFDASFPF" gene complement(1046892..1047362) /locus_tag="SKA53_05233" CDS complement(1046892..1047362) /locus_tag="SKA53_05233" /note="COG2927 DNA polymerase III, chi subunit" /codon_start=1 /transl_table=11 /product="DNA polymerase III, chi subunit, putative" /db_xref="CDD:15662" /translation="MGAVFFYELQGAPLETTLPMLLDKARGQGWRVLVRGTDPALLAQ LDAALWQGPVDHFLPHGLAGGPHDADQPILLGDLPAAGFACVMAVGGAAVSAEEALLL ARACILFDSAEHAKAQARLQWKTLTDAGIAAQYWAQEDGRWVKKAERDARSAGG" gene complement(1047363..1048832) /locus_tag="SKA53_05238" CDS complement(1047363..1048832) /locus_tag="SKA53_05238" /EC_number="3.4.11.1" /note="COG0260 Leucyl aminopeptidase" /codon_start=1 /transl_table=11 /product="leucyl aminopeptidase" /db_xref="CDD:27887" /translation="MPIPAEIRFADTDLDQIATAAGKIAVFVDMDGRMDTAGRKLNSL TRKALDRLIHSDRFTKMAAGDLAVISYPAGLAADALCVVKLARRPSVAEARKAGAQLA KAQNGQDLTVLAGTTPRAADIALGLALRGYHFDTHKTGDKPAPCKVCFMVADPESVAK TAAPMAAIAEGVFFTRDLTNEPANVLTTDDFAARLTAMQELGLDVEILEEPDLVRLGM RTLLAVGQGSDSPSKVVVMSWNGGKAGDAPFALVGKGVVFDTGGISIKPAAGMEEMTM DMGGAGVVAGVMRTLALRKARANVVGLVGLVENMPSGSATRPGDVVRSMKGDSVEIIN TDAEGRLVLADVLWYAQDKFKPCAMIDLATLTGAILVALGHENAGLFSNDDALCAQFL RAAEAEGEGAWRMPLAKPYDALIKSQIADMKNVGGRYAGAITAAQFLQRFVKDDVPWC HLDIAGVAHVKSETALAPAGATGWGVMALNRLIADNFEA" gene 1048982..1050091 /locus_tag="SKA53_05243" CDS 1048982..1050091 /locus_tag="SKA53_05243" /note="COG0795 Predicted permeases" /codon_start=1 /transl_table=11 /product="Predicted permease" /db_xref="CDD:7157" /translation="MLSQLIMLCGFFGLVLVLVYSINRAVLLFDQLIADGQSAGVFVE FTALTLPSVIRLALPLAAFAAAIYVTNRMTNDSELVVVQATGYSLFRIARPVLYFGLI VALLMSLLMHFLVPRSAAQLALRQTEIARNVTARLLTPGTFTEPIAGVTFYIRDLSPD GELFDLFLSDTRGIEDQVTYTASRAFLVREAQETQLVMIDGMVQTLRLADQRLFTTRF AEFSYNVGGLLAPVTQAGRRASHLSTWELLHPTPALVAETGSSAARMIADGHDRFSQS LLGMVAALIGFATLMVGSYSRFGVWRQIVAAIALIVVVKALETAGLNAARADAQLWFL TYLPGAGGLVIVWCLLFWASRPYLFKRRPSAGVPA" gene 1050088..1051182 /locus_tag="SKA53_05248" CDS 1050088..1051182 /locus_tag="SKA53_05248" /note="COG0795 Predicted permeases" /codon_start=1 /transl_table=11 /product="permease, YjgP/YjgQ family" /db_xref="CDD:7157" /translation="MILHRYFARRFLMTFLGVLAVFFLIMLFLDLVEQSRRYASAEAG LRDLLTLTLLNIPRAIYEILPLIMILAAIGLFLGLARSSELVVTRAAGRSALRAILAP LAVGLLIGIVAVAVLNPIVAATSKEYEARGGALRGNASALSIGSSGLWLRQGASDEQT VIRAAGANLDGTVLTDVTFLTFTPDVGPARRVNAASAVLTDGAWVLRNAKVWTFGGTL TPEAGAVTQATMRIASTLTPDQIRDSFGTPSSIPIWQLPAFIDRLREAGFSAQRHLVW LHSEIAQPVFLMAMVMIGASFTIRHQRGGRTGLAVMTAILLAFVIYFIRNFAQVLGEN GQLPAALAAWAPPLAAMALSLGILLHNEDG" gene 1051182..1053287 /locus_tag="SKA53_05253" CDS 1051182..1053287 /locus_tag="SKA53_05253" /note="COG1452 Organic solvent tolerance protein OstA" /codon_start=1 /transl_table=11 /product="organic solvent tolerance protein, putative" /db_xref="CDD:11166" /translation="MRWLVLILLLLPQVARAQNVATLVADHVTLSADDRLIASGNVVA FFDGTRLRASQIIYDRSADRLIITGPITLQDAAGDVLTADSGDLDPRLENGILLGARI VLDQQLQLAANQIDRRDGRYLQLYRSTASSCRVCGTRAPLWEIRAEKVTHDTLEQQLY FENATFLVRGLPLFWLPAMRLPDPTLDRATGFLIPRQRSTSQLGTGIKLPYFITLGDH ADMTLSPYVSAQTRTMELELRRAFASGSVTVRGAVSDDTLQDDLRSYLFATGSFSLPD NYKLQFNVETVSDKAYLLDYDYDDKDRLESGLSLVRVTNTSLNELRFSYFQTLREVET NASLPPIIGEVRREARMQPGFGGTLSYATSIDTAYRPDTTDGSAGRDVTRAGGRADWR RDVILPGGFVATAQTGLRGDIYQVRDDSAYPGTDLRLVPSGLATLRWPLARQVGARQR VARHLIEPTLTLSWAAVHGASPPNEDSTRSEFDPANLFDRSRFTGQDAVETGTQLAAG LTWTRLGPAGGASSLTFGRVFRDRAQPDFTPSSGLDGTDSDWLVSGQYTTAGGFLIEL RGLFDDDIETTRTDGRARWSNERLAVGATYIWQGRDQAENRFDTISEWTLDSGFQLTE TLRMSADARYNVAADRPVQAGLGFTWQNECVTLAVSASRRYTASTSVDPTTTFGLVGS LSGFSTGRSAKGPAAQCRQ" gene 1053275..1054522 /locus_tag="SKA53_05258" CDS 1053275..1054522 /locus_tag="SKA53_05258" /note="COG0760 Parvulin-like peptidyl-prolyl isomerase" /codon_start=1 /transl_table=11 /product="PPIC-type PPIASE domain" /db_xref="CDD:25575" /translation="MPAMTRKEDRMRAFSTWTAVLALALGLGQPATAQNQFAPAITVN ERVITQYELTQRIRLLEVFGTRGDIAQAARDALIADRLKQQEIDRVGLQVPPEAINAA LDEFAGRADMDLAQFNAMLAQNGVDAVTLRDFVSIGVTWREYVRARFNREVTVTDADI ARAQGQIGRATSEMEVLLNEIIIAAPPEMADRAAQAADQIAQMRSFADFEAAARQVSA LPSRDQGGQLDWLPIANYPPQLQSLILDLDTGEVTEPIMIPNGIALFQMRGKREALRP AAAPASIDYAAYFIAGGQSDAALQMARDIANNVDTCDDLYGVARNRPADVLDRRTLPP AEIAQDIALELARLDPNEVSTNLTRDNGQTLVFLMLCQRNAAGAAETDPDALRNQIRG QRLTTLADALVEDLRAQAVIVAR" gene 1054519..1055535 /locus_tag="SKA53_05263" CDS 1054519..1055535 /locus_tag="SKA53_05263" /EC_number="1.1.1.262" /note="COG1995 Pyridoxal phosphate biosynthesis protein" /codon_start=1 /transl_table=11 /product="4-hydroxythreonine-4-phosphate dehydrogenase" /db_xref="CDD:17454" /translation="MKPIAISCGEPAGIGPEVAAKAWAALRHDLPMVWIGDPAHLPAG TPVRVVDDLNGITPDAMAVLARNFGSPAIAGQPNPAHAQGVIDAIATGVDLVRSGQAS AICTAPIHKAALIAGAGFAYPGHTEYLAALAGVDRVVMMLACEGLRVVPATIHISLEK VPETLTATLLTDTILITHAALRRQFGIAAPRIAVAGLNPHAGEDGKMGDEEITTITPV LDALRAEGLDISGPHSADTMFHAAARARYDVAICMYHDQALIPIKTIDFAGGVNITLG LPLIRTSPDHGTAFDIAGLGVADPASMIAALRQAERMAKNVDASGGDHPDLPQAIHGA RKMA" gene 1055532..1056377 /gene="ksgA" /locus_tag="SKA53_05268" CDS 1055532..1056377 /gene="ksgA" /locus_tag="SKA53_05268" /EC_number="2.1.1.-" /note="COG0030 Dimethyladenosine transferase (rRNA methylation)" /codon_start=1 /transl_table=11 /product="dimethyladenosine transferase" /db_xref="CDD:9906" /translation="MSGIDDLPPLREVIARYDLAPKKSLGQNFLLDLNLTARIARLAG DLAGADVLEIGPGPGGLTRGLLASGARRVLAIEKDPRCLPALAEIAARFPGRLQVIEG DALAIDPLEYLQAPIKVAANLPYNVGTELLVRWLTPQVWPPFWDSLTLMFQREVAERI VAQPGGKAYGRLALLAQWRADAKIVMNLPPEVFSPPPKVHSAVVHLTALPAPRYPADP AVLNMVVAAAFNQRRKMLRSALKSVSPAIEDHLQEVGIKPTERAEQVGLEAFCALARS LKAAR" gene complement(1056381..1056821) /locus_tag="SKA53_05273" CDS complement(1056381..1056821) /locus_tag="SKA53_05273" /note="COG3109 Activator of osmoprotectant transporter ProP" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRGTPQQIIEKYNQLHRDAQLSNDRVNAENFAQHAEHYTRLLAE AQREVDQRRDELEAQNRERQAERDKERNDRMQAQEQAGNDQPAAVERPDPRETDDLGA QGPDAGLVETPEEKPQQRARKPRAPRKPRPDNRDGAATTPEAAE" gene 1056859..1057023 /locus_tag="SKA53_05278" CDS 1056859..1057023 /locus_tag="SKA53_05278" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMFPPEGRGVRFLLRDRDLDDLIDMLSSLWQTLRWRCIAQRRVI DVVALECFGN" gene complement(1057139..1057972) /locus_tag="SKA53_05283" CDS complement(1057139..1057972) /locus_tag="SKA53_05283" /note="COG2890 Methylase of polypeptide chain release factors" /codon_start=1 /transl_table=11 /product="modification methylase, HemK family" /db_xref="CDD:12240" /translation="MSGFFAGGRFWDMTAADQAAMNQGHAQLGAAGVGDPGHESRLIW AHVTGDSAHFAALVARRAARAPLSHLLGYRDFYDHRFIVTPDVLDPRPDTEAIVTAAL ADPFAHVLDLGTGSGCILLSLLAARPQATGLGVDLSDAALAVAAQNRSALGLDQRATL VRSDWFTAVTGSFDLIVSNPPYIAATEMAGLQPEVRLHEPHLALTDGADGLSYYRIIA AGAGAHLAPGGRLIVEIGPTQASDVSALLRAAGFTDLRVIPDLDGRDRGIAGRWGAAA A" gene complement(1057969..1059024) /locus_tag="SKA53_05288" CDS complement(1057969..1059024) /locus_tag="SKA53_05288" /note="COG0216 Protein chain release factor A" /codon_start=1 /transl_table=11 /product="peptide chain release factor 1" /db_xref="CDD:10091" /translation="MIAADKIEQIIDRFRFLEAKMSDAAHGGDIAALGREYAELRPVV DTVTAYKDLLAQMIDTQALLKDPEMRALAEDELPELKAALAASEHAVQLALLPKDAAD ARPALLEIRPGTGGDEASLFAGDLLRMYQRYAENMGWRFEILEQSQTELGGIKEVVAR VAGEGVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAQDVDIQINPNDLRI DTMRASGSGGQHVNTTDSAVRILHIPTGLIVVSAEKSQHRNREIAMQVLKTRLFDLER QRIDGERSADRKAQVGSGDRSERIRTYNFPQGRLTDHRINLTLYSLGQVMAGDLDTII DALQSEAQAALLAEMGA" gene complement(1059043..1059537) /locus_tag="SKA53_05293" CDS complement(1059043..1059537) /locus_tag="SKA53_05293" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MYTMLVLCGHGAKRCPMLTIMVRALVVLGIVILGLMAYVRLAPT DAARWHQIAAVASAGDVMATGGFMAVRQITADPAQVLAAIDTIARATPRTRAIAGSVD AGMMTYQTRSLIWGFPDHTTVAVQGDLLVIHGRLTFGQADMGVNRARVLDWLDQLGPL TTAP" gene complement(1059551..1060519) /locus_tag="SKA53_05298" CDS complement(1059551..1060519) /locus_tag="SKA53_05298" /note="COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family" /codon_start=1 /transl_table=11 /product="Hydrolase arginase family" /db_xref="CDD:9886" /translation="MALEDAKGQVDLAFTRQDRRGLAFENAFGGAVSFLRRAYTKDLT GVDLVVTGVPFDQAVTHRPGARFGPRAIREASCLQPYDPPYGWDGFDPLSEFSIVDYG DMAFDYANVAGVPALVEAHIARILGAGAASVTLGGDHFITLPILRAYAAKYGPLSVIQ FDAHSDLWFDDDMARIDHGTFMYKAVKLGLVDPARSVQIGIRTECDDYMGMRYIDARS CHERGVADVVAEVRGIVADHPAYVTFDIDALDPAFAPGTGTPVWGGLASWQAAAILRD LAGINMVGGDIVEVSPPYDTTGATAIAGAHVAMELCCLTLWNKRKK" gene complement(1060572..1061729) /locus_tag="SKA53_05303" CDS complement(1060572..1061729) /locus_tag="SKA53_05303" /note="COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase" /codon_start=1 /transl_table=11 /product="amidohydrolase family protein" /db_xref="CDD:11187" /translation="MPVINRIADFTAEMTGWRRHLHAHPELQFDCHQTAAFVAQKLRD FGVDEIHERIATSGIVAIINGQGAGRTIGLRADMDALPMEEVTGLDYASTVKGAMHAC GHDGHTTMLLGAAKYLAETRNFAGRVALIFQPAEEAGGGAEVMVNAGILDTFDVAEVY ALHNAPGTAVGAFYTTPGPIMAAVDTFHIHVKGRGGHGAMPHDTADPVVACVGIVSAI QTIVSRNHFAFDQLVVSVTQIHTGTVDNVIPDTGYINGTVRTFDPAVQAMVRDRLEGI VAGQAASYGVTATLDYEIGYPATVNDPDKTAFAADVAREISADVVADAAPEMGAEDFA YMLHQRPGAYLFVGNGDTAGLHHPGYDFDDALSPVGASFFARIVERALPVA" gene 1061792..1062613 /locus_tag="SKA53_05308" CDS 1061792..1062613 /locus_tag="SKA53_05308" /note="COG1694 Predicted pyrophosphatase" /codon_start=1 /transl_table=11 /product="mazG family protein" /db_xref="CDD:13262" /translation="MAQDALIHDPDGGMQRLLEIMRRLRDPATGCPWDIVQDFDTIAP YTIEEAYEVADAIARADWPDLEGELGDLLLQTVYHAQIGAEAGHFTFDSVVRNIADKM VARHPHVFGDHNRDKTADQQVADWEKIKAAERADRAQGGVLDGVALGLPALMRAVKLQ KRAARVGFDWPDTSHVLDKIIEEAGELVAARDTMTQTEITDEMGDLLFVLANLARHLG VDPEAALRGTNEKFTRRFRGIEAALAAQGKTPADSDLAEMDALWDAQKALEKGRK" gene 1062692..1063696 /locus_tag="SKA53_05313" CDS 1062692..1063696 /locus_tag="SKA53_05313" /note="COG1840 ABC-type Fe3+ transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC Fe+3 siderophore transporter, periplasmic substrate-bindingprotein" /db_xref="CDD:11550" /translation="MNLRHILLASTCAAIAGPAIADVNIYTTREPVLIQPVMDAFTAE TGIAVNLSYIDDGLVERLTAEGARSPADLVMTVDIANLKQIVDAGVVQAVESDVLNAA IPAELRSDENLWFGLTTRARIIYASKDRVADGEVTTYEDLTSDKWEGRICSRSGLNNY SLALLSAVIAHKGEDGAREWAAGLRENLARKPEGNDRAQVRAIWAGECDISLGNTYYM GGMLADPEQQEWANSVRIIFPTFQDGGTHVNVSGVAMTQSAPNRDEAVQLMEFLVSPD AQAIYAETNHEYPVLAGAARSELVSSWGEFTPDTVDLNALAANRPVSVRITEEVNFDG " gene 1063848..1064564 /locus_tag="SKA53_05318" CDS 1063848..1064564 /locus_tag="SKA53_05318" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-hydroxyacyl-CoA dehydrogenase, type II" /db_xref="CDD:25396" /translation="MDISTAVVIVTGGASGLGAATAQAFVAAGAQVTIFDRDPAGADF AAQIGAGFAQVDVTDEASVSAGLDQVAGLNVVVNCAGIATAEKTLGRDGPHRQDSFAR TIDINLCGTFNVARLAAARMAQGGVIINTASVAAFDGQKGQAAYAASKAGIAGLSLPM ARDLGRNGIRVMAIAPGIFRTPMLVSLGEDVMAGLAKDVIYPARLGDPAEFAALARFI VECDYLNGTTIRLDGALRMP" gene complement(1064565..1066373) /locus_tag="SKA53_05323" CDS complement(1064565..1066373) /locus_tag="SKA53_05323" /note="COG0488 ATPase components of ABC transporters with duplicated ATPase domains" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /db_xref="CDD:10359" /translation="MARAPLLQISDIALTFGGDPVFADLSLVIQPGDRVALVGRNGSG KSTLMKVMAGLVLPDSGTRVASPGVQVGYMEQDPTMEGFATLGEYASSGLPPEEAYKV DMVAEGLKFDPDGAVATASGGERRRAALAKLMAEAPELMLLDEPTNHLDIEAIAWLEN ELKQTRAAFVLISHDRAFLRALTRATLWIDRGAVRRAEQGFDAFEEWRDKIWEDEDQQ RHKLNRKIKAEARWAVEGISARRTRNQGRLRALQDLRAEKAGQIRRQGTAAMAFDGGS TSGRKVVECFGLSKSFDGKSIVQGLDLTVQRGDRIAFVGPNGVGKTTLIKMLLGQVEP DAGQVKLGTKLDIAVFDQTRAALNPDMTLWENLASDPELGVSGKSDQIMVRGTPKHVV GYLKEFLFDEAQARAPVRSLSGGEKARLLLARLMARESNLLVLDEPTNDLDIETLDLL QDILGDYDGTVLLVSHDRDFLDRVATTTIAMEGNGQAVVYPGGWTDYRDQRGGDFTES ATATKPLAKKDKPAEKKTSGGLSFTEKHRLDALPGVIATLTAEIGKLEELLADPALFT DNPVKFAKATDALIARQMQLSDAEDEWLALEEKAAG" gene complement(1066415..1067152) /locus_tag="SKA53_05328" CDS complement(1066415..1067152) /locus_tag="SKA53_05328" /note="COG3176 Putative hemolysin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12514" /translation="MQSPRQAMTIAFEIGRYRTRLATAPADLAACQQLRHACFFGKPG LDSDAFDARCRHLMIEDAAGRLVAAARIMLMAQGADVAQSYAAQFYDLSGLAAQQAPM MEMGRFCIAADVLDADVVRVAWGALAQLVDDHGVQIMMGCTSFTGTDPALYGTGFARL AAQHQGPAHLRPGVKAPETVALIGQGDGTAPLPSLLRSYLAMGGWVSDHAVVDRQMNT LHVFTCLDIAAVPPARARALRAVMGAR" gene 1067147..1067590 /locus_tag="SKA53_05333" CDS 1067147..1067590 /locus_tag="SKA53_05333" /note="COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase" /codon_start=1 /transl_table=11 /product="Peptide methionine sulfoxide reductase" /db_xref="CDD:25798" /translation="MHAGALPYAQQTKKEYDMDKIIKTDAEWRAQLSDLAYKVTRKHG TERAGTHDDFPKNNGTYLCICCGAPLFDQSAKFESGTGWPSFYQPIDPAQVEESVDRG FFMTRTEVHCARCDAHLGHVFPDGPAPTGLRYCMNGVALGFEPAD" gene complement(1067587..1068066) /locus_tag="SKA53_05338" CDS complement(1067587..1068066) /locus_tag="SKA53_05338" /note="COG2913 Small protein A (tmRNA-binding)" /codon_start=1 /transl_table=11 /product="lipoprotein, SmpA/OmlA family" /db_xref="CDD:12262" /translation="MNMTKLRASLRVSGFVAAVVAVTACTPMTRFNGFAPAARELAQV QIGQTTRADVVTLFGAPTSDGGMRSDTIYYVASQFDRIGPFAPKEVDRTVIAVRFDSA ERVRNVTRYTLQDGRIVQLDRRVTDDGIEDIGVLEQLLGSFGRIDAGSFLGAEGGGF" gene 1068179..1068694 /locus_tag="SKA53_05343" CDS 1068179..1068694 /locus_tag="SKA53_05343" /note="COG1279 Lysine efflux permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MADLAASRGTSFALTPDAAERHAIADTLGIVGIKKLRFAGTLTP QGRKDWVLSADLGATVVQDCVVTLDPVTSRIDETLTRQYLSDLPELTGTEVEMPEDDT AEPLPDTIDLYAVLTEALALALPLYPRAAGAALEQTIYTEKGVTPLTDEAARPFAGLG ALRDSLKDTDD" gene 1068929..1069135 /locus_tag="SKA53_05348" CDS 1068929..1069135 /locus_tag="SKA53_05348" /note="COG0333 Ribosomal protein L32" /codon_start=1 /transl_table=11 /product="ribosomal protein L32" /db_xref="CDD:10207" /translation="MAVQQNKVSKSRRNNRRAHDSLVAANPNECDNCGEMKRPHHVCP SCGHYATREVVASVTAVDLDEDAA" gene 1069158..1070270 /locus_tag="SKA53_05353" CDS 1069158..1070270 /locus_tag="SKA53_05353" /note="COG0416 Fatty acid/phospholipid biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="fatty acid/phospholipid synthesis protein" /db_xref="CDD:10290" /translation="MIQRQTGSVSTPANVLSVDAMGGDKGPATVVAGLSKFLNATPGA HALLHGPKAELDPLVASHNIAARVTVHDASDVVKMSDKPSHVLRHGKKTSMWSAIDAV RDGQAAVCISCGNTGGLMALSMLRLRKAEGVNRPAIACLWPSRNPAGFNVMLDAGADI RADQDDLLTYALMGAAYARNGLDIARPRVGLLNVGTEEHKGRAELKVAHELIARAADK GEFDYVGFVEGGDLPSNKVDVIVTDGFTGNVALKTGEGTATLVSELLRGAMMGNPLSM LGALLARGSLRRLRKRIDPRRVNGGVFLGLNQTVIKSHGSADATGVAAALHLAYRLGQ TGFSDKLAARVASAAALAQDQGQESAAEAGSNNTGD" gene 1070275..1071246 /locus_tag="SKA53_05358" CDS 1070275..1071246 /locus_tag="SKA53_05358" /note="COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) synthase III" /db_xref="CDD:10206" /translation="MTRRAVVRGIGHYLPDRIVPNSEFEKTLDTSDEWIKTRSGIERR HFAAEGQTTSDLAIHAAKAALAMAQIAPNDIDAIVLATSTSDLTFPSTATMVQHAIGN TTGYAFDIQAVCAGFVYAMSTANALITSGQANTVMVIGAETFSKILDWTDRATCVLFG DGAGALILSAEDGDGSTADRGILSVDLNSDGRYRDMLYVDGGVSTQTTGVVRMEGREL FRHAVEKLAQTADTALHKVGLTADDVAWVVPHQANIRIIQATAKKLGVGMDRVVVTVQ DHGNTSAASIPLALSVGVANGQIKRGDLVVTEAIGGGLAWGSVVLRW" gene complement(1071296..1071646) /locus_tag="SKA53_05363" CDS complement(1071296..1071646) /locus_tag="SKA53_05363" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPDATRSFIRCDGRKVSTRRGWIGTSSPVLGLRPTRAALSRTAK VPKDEILTVSPATSESDTCVSTLSTRSALSLRDRPTSLWTASARSMRVSVLSAIDRFP AISHHIGAGQFQSQ" gene 1071354..1071656 /locus_tag="SKA53_05368" CDS 1071354..1071656 /locus_tag="SKA53_05368" /note="COG0776 Bacterial nucleoid DNA-binding protein" /codon_start=1 /transl_table=11 /product="Histone-like DNA-binding protein (IHF)" /db_xref="CDD:25448" /translation="MADKTLTRMDLAEAVHNEVGLSRNDSADLVESVLTHVSDSLVAG DTVKISSFGTFAVRDKAARVGRNPKTGEEVPIHPRRVLTFRPSHLMKDRVASGNKS" gene 1071660..1072307 /locus_tag="SKA53_05373" CDS 1071660..1072307 /locus_tag="SKA53_05373" /note="COG0789 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="trancriptional regulator, MerR family" /db_xref="CDD:27760" /translation="MVKAREAFRTISEVAEWLDTPTHVLRFWETKFSQIRPVKGAGGR RYYRPSDMDLLAGIKQLLHEDGLTIKGTQKLLRDKGVKYVAMLGPRVDGGSDDTELSE DALLADQGDAVPDLDDMLPDQMDQLLEPVTQIVPPPLAAPAAPPQPLQTALPFDDIAQ PRLAVFPAPPDGLPDVPARLIGRAPLHAGALHAQAARIAPVLARLDAVRDRMRHG" gene 1072419..1072492 /locus_tag="SKA53_t05592" tRNA 1072419..1072492 /locus_tag="SKA53_t05592" /product="tRNA-Pro" gene complement(1072506..1072658) /locus_tag="SKA53_05378" CDS complement(1072506..1072658) /locus_tag="SKA53_05378" /EC_number="3.5.4.13" /codon_start=1 /transl_table=11 /product="2'-deoxycytidine 5'-triphosphate deaminase" /translation="MKIIPLALADTKTPAARKRKRAMISVWEKLLPYRGLSHRAKAKG VVSGLS" gene 1072657..1073739 /locus_tag="SKA53_05383" CDS 1072657..1073739 /locus_tag="SKA53_05383" /note="COG0717 Deoxycytidine deaminase" /codon_start=1 /transl_table=11 /product="2''-deoxycytidine 5''-triphosphate deaminase, homolog" /db_xref="CDD:26671" /translation="MQNGVLADHQIRALIAQGAIRASAPIDAGQVQPASLDLRLGAIA YRVRASFLAGRSRTVTERLADFQMHAIDLTGGAVLEKGCVYVVPLMESLALPAGMTGA ASAKSSIGRLDLLTRIITDHGVEFDRVPAGYDGPLFVEICPRSFSVVAQPGQMLNQII FRQGKTIMSDEDLRALHATTPIVSGDPVISDGLGFSVDLRPEAGNLVGYRAKPHTGVI DLAKLNHYDPAEFWEPVHTDTGWIILDPGAFYILVSREAIVIPPMQAAEMAPYLAMVG EFRVHYAGFFDPGFGYAAAGGAGSRGVLEVRCHEAPFVLEHGQVVGRLVYEHMAALPA ALYGQAIQSNYQGQGLKLSKHFKPSA" gene complement(1073729..1073905) /locus_tag="SKA53_05388" CDS complement(1073729..1073905) /locus_tag="SKA53_05388" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNMNRLINMVVRQVMNRGIGKGMQMLSKGGGQADKPAPGAGQGK QLQQGLRLLRRFMR" gene complement(1073953..1074594) /locus_tag="SKA53_05393" CDS complement(1073953..1074594) /locus_tag="SKA53_05393" /note="COG1386 Predicted transcriptional regulator containing the HTH domain" /codon_start=1 /transl_table=11 /product="segregation and condensation protein B" /db_xref="CDD:26185" /translation="MAKPQNDSLFDAPPMGEQERMVEAILFATADPVTVQDLIGRMPH GCDPAEALAYLRKRYEGRGVNVVRIGDAWAIRTAPDLGFLMQKEIVETRKLSRAAIET LAIVAYHQPVTRAEIEEIRGVSVSRGTIDQLIEMEWIRLGRRKMTPGRPVTFVVTQAF LDHFGLENARDLPGIKELRAAGLLENRPPPGTVALGDPGDDNGDADQSELFED" gene complement(1074587..1075381) /locus_tag="SKA53_05398" CDS complement(1074587..1075381) /locus_tag="SKA53_05398" /note="COG1354 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="segregation and condensation protein A" /db_xref="CDD:11070" /translation="MQPDEFEQDTDRISARVAAEALIVDVGAFEGPLDLLLTLSRTQK VDLRQISILALAQQYLAFVEQAKALRLELAADYLVMAAWLAFLKSRLLLPPDPREAGP SGEELAAHLAFQLERLSAMREAAAQLMARDQLGRDFFARGITEDVQRVRRIRYTATLL DLMQGYARIRTRDDFRPFVLDRAHVMTMEQALERMRHLIGFAGDWTDIVSYLPDGWDA DPQRRRSTTAATFAASLELAKEGKIEIRQGDTFAPIQIRKKEPRHG" gene complement(1075388..1076374) /locus_tag="SKA53_05403" CDS complement(1075388..1076374) /locus_tag="SKA53_05403" /note="COG1472 Beta-glucosidase-related glycosidases" /codon_start=1 /transl_table=11 /product="Putative Glycoside hydrolase" /db_xref="CDD:25657" /translation="MQTAAIFGPAALDITPWERGFFRDADPFGFILFARNIDTPDQIR RLTGDLRDAVGRAAPILIDQEGGRVQRMRSPHWRDYLPALDQMARAADPLRAQWLRYR LIAHDLLSVGIDVNCAPLADLAEDATHPFLQNRLYGRDVPTVIAAARACADGLLAGGV LPVLKHIPGHGRAQADSHLALPRVSASVDDLTAHDFAPFKALRDLPLGMTAHIVFDAL DPDRPATTSPVMMQVIRDQIGFDGLLMTDDLSMQALAGSVTDRSHAAIAAGCDLILHC NGDMGEMTDVAQAAGAMSARAVIRANRALALRKTPETIDITALEAEFETLMA" gene complement(1076378..1077289) /locus_tag="SKA53_05408" CDS complement(1076378..1077289) /locus_tag="SKA53_05408" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MATYEQGLAPQSGSGPAQPWVNATGALVSLSLIFGIGYWGYQLI MRDVTGIPVVRAMEGEMRVLPDDPGGDIARHVGLSVNELVAMGEAAAPEDRLVLAPRM PGLAREDLEARPMAAVDDVGEEIMQPVALLPDADAIAVPAQTMGTTVEDVLAMVAEIT EAEARSDVAAMDRVPASVPGVAVSLRPILRPASLRPAPAPAPAITRASTTEVPVTTVS FATGTDLVQLGAFSSPALAAEEWARLESRFGALMNGRERVVQVSTQSSGTWYRLRASG FADRDDARRFCAALQAEGAECIAVVVN" gene complement(1077359..1079155) /locus_tag="SKA53_05413" CDS complement(1077359..1079155) /locus_tag="SKA53_05413" /note="COG0018 Arginyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="arginyl-tRNA synthetase" /db_xref="CDD:9894" /translation="MTRAAGVIHLPDQKWTDKMNLFADVRGRVLACLDQMVADGALPQ GLALDAVAVEPPRDAAHGDMATNAAMVLAKPAGLNPRAIADALAVKLAADPLIASADV AGPGFLNMHLVPAAWQGIVKSALSDKGFGRSRLGQGQRMLVEYVSANPTGPLHVGHTR GAVFGDALASLLDYAGYDVTREYYINDGGAQVDVLARSVYLRYVEAHDLTVDWPEGSY PGDYLIPVGEALKEKVGSEYLDQSEDVWLDDVRLFATDAMMALIRADLAQLGIEMDSF YSEKSLYGSGLIEKAIAELDAKGLIYQGVLEAPKGKTPEDWEPREQTLFKSTAHGDDV DRPVQKSDGAWTYFAPDIAYHYDKVQRGFDALIDVFGADHGGYVKRMKAAVAALSDGK VPLDIKLTQLVKLYQNGAPFKMSKRAGTFITLRDVVDEVGPDVTRFHMLTRKNDAPLD FDFAKVLEQSKDNPVFYVQYAHARVNSVLRKAQDAGVAVDDATLAAVDLSGLTHEAEL AVARKIAEWPRLVEIAAKGHEPHRIAFYLYDLASDFHALWNRGNDDASLRFLQMGDSD TTQAKIALIRAVAIVISHGLGILGVTPAEEMR" gene complement(1079152..1080324) /locus_tag="SKA53_05418" CDS complement(1079152..1080324) /locus_tag="SKA53_05418" /note="COG0232 dGTP triphosphohydrolase" /codon_start=1 /transl_table=11 /product="deoxyguanosinetriphosphate triphosphohydrolase, putative" /db_xref="CDD:10107" /translation="MTAPYATDPANPRGRLYAEEESTFRSPFQRDRDRIIHASAFRRL KHKTQVFIEHEGDYFRTRLTHSIEVAQVARTIAATLGLNVELTEAVALAHDLGHTPFG HTGEEALDALMQPYGGFDHNAQALRIVTDLERHYAEWDGLNLTWETLEGIAKHNGPVV GDIPYALAAYNARHDLELHTHASAEAQVAALSDDIAYNNHDLHDGLRAELFSTDDLAA LPILRDCFARVDAKYPGLNYYRRRHEALRRFFGVLVEDVIAVSRRNLADLNPRSVHDI RHAGRMVIQFSPDLWTDLKVIRQFLFDRMYRAPAVVEMRVVVTNMVNELFPFFMDNPD ELPKQWRKDVADAQGRTALARIVADYIAGMTDRFAIQEHKRLIGGETIPPGVIDGN" gene 1080371..1080721 /locus_tag="SKA53_05423" CDS 1080371..1080721 /locus_tag="SKA53_05423" /note="COG0316 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="Iron-sulfur cluster assembly family protein" /db_xref="CDD:10190" /translation="MNNPKGDAMLTLPPQVTPRAFERLAEIGAAAQGKALRIAVEGGG CSGFQYEIDLDEPKDDDLILSDKGETVVIDAISLPFLTDAVIDFSEELIGARFVINNP NASSSCGCGTSFAM" gene 1080721..1081500 /locus_tag="SKA53_05428" CDS 1080721..1081500 /locus_tag="SKA53_05428" /note="COG0708 Exonuclease III" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease III" /db_xref="CDD:10577" /translation="MKIATFNINGVKARIETLCDWLDDSAPDVAILQEIKSVDDGFPR QLIEDRGYTLETHGQKGFNGVAILSKLPLEDVTRGLPGDDADEQARWIEATVVGDVAV RICGLYLPNGNPAPGPKFDYKLAWMERLLARATALLADEMPALMAGDYNIIPQGMDAA RPQVWRDDALFRPESRAAYRRILNLGFTEAFRTLEPGAGHYSFWDYQAGAWEKNNGIR IDHFLLTPQCADLLAGAWIEKDLRARDKPSDHVPVWVELRP" gene complement(1081531..1082694) /locus_tag="SKA53_05433" CDS complement(1081531..1082694) /locus_tag="SKA53_05433" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="salicylate hydroxylase" /db_xref="CDD:10524" /translation="MKKSTATIDVGANAGRSIAIIGGGIGGLTAALAFARQGAQVTVH EQAPAIAEVGAGLQLTPNGARALAALGLADALDQSGLRATAVKPVDALSGRAIARFDL TRQTPPYRFVHRADLIGLLAQACAAAGVRIVLNARIADVTADGLSGADLTLGADGLHS VIRPVLNTADAPFFTGQVAWRAIIPAANVPPVAQIWMAPGRHVVTYPLARNRLNIVAV QERDIWAAEGWHHGDDPANLRAAFADCAAPLQDLLAGVDACNLWGLFRHKVADHWHND QIALLGDAAHPTLPFLAQGANLAIEDAFTLAQITDAQPNLAQALHAYQSARRPRVSRA IAAANANARNYHLSGAPRRVAHLGLKTLGKIAPDAFINRLGWLYDHDVTTSSV" gene complement(1082669..1083136) /locus_tag="SKA53_05438" CDS complement(1082669..1083136) /locus_tag="SKA53_05438" /note="COG1734 DnaK suppressor protein" /codon_start=1 /transl_table=11 /product="dnaK suppressor protein, putative" /db_xref="CDD:11445" /translation="MACGRVTRSPDKENAMKAEVFLSNDYRPADDEPFMNERQTEYFR RKLLDWKAEILEDSRDTVAGMKDQTRNIPDVADRASEETDRSIELRTRDRQRKLVNKI DAALRRIDDGEYGYCEITGEPISLKRLDARPIATMSLEAQERHERREKVHRDD" gene 1082681..1083202 /locus_tag="SKA53_05443" CDS 1082681..1083202 /locus_tag="SKA53_05443" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDFFTPFVAFLRFKAHRGDGARIQTLERNRLAGDFTIAVFAIVD SAQRGVDLVDQLALAVAGAQLDRPVGFFRGAVCHIGDIAGLVFHPRHGVAAVFEDLRL PIQQLAAEIFGLAFVHERFVIGRTIIVRKKHFGFHRIFLVWRSGNATTGHAATVPIPA PCTLLALPCHPLN" gene 1083271..1084110 /locus_tag="SKA53_05448" CDS 1083271..1084110 /locus_tag="SKA53_05448" /note="COG0714 MoxR-like ATPases" /codon_start=1 /transl_table=11 /product="ATPase, AAA family" /db_xref="CDD:10583" /translation="MQFTGTDSYIATDDLKMAVNAAVTLERPLLVKGEPGTGKTELAR QVSAALGLPMIEWHIKSTTKAQQGLYEYDAVSRLRDSQLGDARVNDVANYIKRGKLWQ AFAAPGRVVLLIDEVDKADIEFPNDLLQELDRMEFHVYETGETVRAIHRPIVIITSNN EKELPDAFLRRCFFHYIRFPDIEILRRIVAVHHPQIKDALLTTALTQFYDIRDTPGLK KKPSTSEVLDWLKLLLAEDLTPEDLRRDGADALPRLHGALLKNEQDVHLFERLAFMAR GKR" gene 1084155..1085540 /locus_tag="SKA53_05453" CDS 1084155..1085540 /locus_tag="SKA53_05453" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRGAPSALPILKYLCLLGVLVLAACTPQLRVAGPEGVAPVRLDF PAMRSFAAASPGPARRPNAQIARDFSDLSFQLESGRPIPLFTRFEGPVTVAFNGPVPA QLAADLDGLLARLRAEAGIDISQITGGDATIRIELVAPRQLRQAAPGAACFVVPRVRD WAALRRNRQSPLIDWTTLQVREQAAVFIPNDATPQEMRDCLHEELAQALGPLNDLYRL PDSVFNDDDMHAVLTGFDMLILRVTYAPELRSGMTPPEVMARVPGILERINPAGAGGA APLTAATTRDWTQAIIIALGGTASRGVRQQAAAHAVAIGQARGWTGTRAGFAQYVFGR LQIGTDPSLALGAFNAATRAYAGDPNLRIQAAHVAQQQAAFALIARDPEAILALTGPA ITVARQHENAALLAVLMMLRAEALDLQGQPEAAMALRLDSLGWGLYGFGDRDAVIARL NEIASLSRLPS" gene 1085561..1085731 /locus_tag="SKA53_05458" CDS 1085561..1085731 /locus_tag="SKA53_05458" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIYPLSGLLIGAAIGAWRAKANGGKPLDMLQWGAAFGIALGLVG LFVLIFVERSLL" gene 1085736..1086923 /locus_tag="SKA53_05463" CDS 1085736..1086923 /locus_tag="SKA53_05463" /note="COG3825 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13143" /translation="MFLPFFDNLRKAGLPVSLREFLSFLEGMKSGLATYDVEAFYFLA RTVMVKDERHLDRFDRAFATSFEGLEAIPAEAVLNAIDIPADWLEKLAEKHLSADEKA EIAALGGFDKLMETLKQRLAEQKGRHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQDQS RHQRAVKVWDKREFRNLDDSVALGTRNIKVALKRLRRWARDGAPDELDLPGTIRATAE HGYLDVKTRPERRNAVKVLLFLDIGGSMDPHIKVAEELFSAAKSEFKHFQHFYFHNCL YEGVWKDNRRRWDAQTPTWDVLHTYGPDYKCIFVGDASMSPYEIAYPGGANEHMNAEA GAVWLARARDQWRDTLWINPVEERQWPYTQSIGMIREIFGAERMVPMTLDGINRGMKA LVG" gene 1087026..1087712 /locus_tag="SKA53_05468" CDS 1087026..1087712 /locus_tag="SKA53_05468" /note="COG0501 Zn-dependent protease with chaperone function" /codon_start=1 /transl_table=11 /product="peptidase, M48 family" /db_xref="CDD:13919" /translation="MMKFLPIFLALVYGYAMFRFSVWRTARALDDKSTELADPMIKVL MDRMAKALGIDRIRVHIYEIPQVNGLAAPDGRIFITRGFFNKYRAGEVSSEEMASVIA HELGHVALGHSRRRMIDFSSQNAMRTALAMIFNRFLPGIGPWIAGALISLVAARLSRD DEFEADAYASALLVKAGIGTGPQKTLFAKLEKLTGAHGAATPAWMLSHPKTALRIAAI EAHEAKWQAP" gene complement(1087709..1088254) /locus_tag="SKA53_05473" CDS complement(1087709..1088254) /locus_tag="SKA53_05473" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKVLIDACVLYPTVMREMVLGCAAQGLFAPRWSARVLEEWARVA AKLGPAQEIWARGEIAALAARFPGANIRYDTGIERRFWLPDTGDIHVLAAAVAGSCDA ILTMNAKDFPRNILDDEGLQRLDPDNFLLDLWQHAPQPVQSVADGVLAEAQRLSGQDW TLRALLKKARLPRLGKALTAR" gene complement(1088251..1089456) /locus_tag="SKA53_05478" CDS complement(1088251..1089456) /locus_tag="SKA53_05478" /note="COG1092 Predicted SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10814" /translation="MTQHDASDRATVRLIPKAEARAIRHGYPWVYANELVTDRRTRGL PAGSIALLEDANRTPMGVVAVNPASKIICRMLDQNPEAVIDQAWFAARISRALAHRAR VYPEPFYRLIHAEADGLPGVIIDRFGDIAVVQPNAAWADVLIAPLVAALQDVTGVTTV IMNGTGRTRALEGLAERMDVLAGNAPTAPVAVPMNGATYLADIMGGQKTGLFFDQRPN HAFAAGLSRDARVLDVFAHVGGFGLAALAQGAASVLAIDGSAPALDLAEQGAAAMGVA DRFSTRKGDAFDVLTALAEEGAQFDVVICDPPAFAPGKAALEAGLRAYERVARLAAPL VAPDGYLALCSCSHAVDLTKFRNASARGIGRAGRRGQIIHTGFAGPDHPLMPHLAESG YLKAVFFRL" gene complement(1089507..1090064) /locus_tag="SKA53_05483" CDS complement(1089507..1090064) /locus_tag="SKA53_05483" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /translation="MFQRFLSVLALLGAFAACAPAGTVQGDPRQDIARDYRLAGVNFS ALADLTISEENSIYPQADIVWHGDAPGDRIAQIAAMFQEAAARNIVATRAGDRPVALD ITLVRFHGVTRRAEFSTGGVHHIVFDLTVRDADIGTVIEPKRRVVANLEAWGGNINAQ LDAQGATQKVRVTDFLTSVLADQLR" gene 1090239..1092044 /locus_tag="SKA53_05488" CDS 1090239..1092044 /locus_tag="SKA53_05488" /EC_number="4.2.1.12" /note="COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase" /codon_start=1 /transl_table=11 /product="phosphogluconate dehydratase" /db_xref="CDD:25654" /translation="MPLHPTIAAVTDRIRARSEGPRRRYLDTMARAAAEGPRRAHLTC GNQAHAYAAMGDDKAALTASSAGNIGIITAYNDMLSAHQPFETYPDKIRAAARAAGGT AQVAGGVPAMCDGVTQGQTGMELSLFSRDVIALAAGVGLSHNVFDSAIYLGVCDKIVP GLVIAAATFGYIPGVFVPAGPMVSGLPNDEKAKVRQQFAAGEIGRDALMAAEMASYHG PGTCTFYGTANTNQMLMEFMGLHMPGASFVNPGTPLREALTVAATERALAISALGNAY TPVCDVLDERAFVNGLVGLMATGGSTNLVIHLPAMARAAGVILDLQDFSDISAITPLM AKVYPNGLADVNHFHAAGGLAYMIGQLLDAGLLHDDTVTIAGKGLAHYTREPKLAETG VIYADGPKISANDRILRPAADPFQASGGLIQLQGNLGRGVIKTSAVAPERHIIQAPAR IFHTQESVKDAFKAGEFTSDTVIVVRFQGPKSNGMPELHSLTPILAVLQDRGHKVALV TDGRMSGASGKVPSAIHVSPEAADGGPISLIRDGDIIRLDATTGTIAVLDVDLATRSP ATADLTGNGTGVGRELFEIFRRSVGPSADGAGVVV" gene 1092156..1092770 /locus_tag="SKA53_05493" CDS 1092156..1092770 /locus_tag="SKA53_05493" /note="COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxyphosphogluconate" /db_xref="CDD:10668" /translation="MKICLLAPVIPVLVISDASCAADLARALVAGGLPALEVTLRTPA ALDVIREMAGVAGGHVGAGTLLTTRDVENAKAAGATFGVAPGATDRLLDACEANDLPL LPGAATASEAMRLLERGYSVQKFFPAEANGGAAALKAIGAPISQVKFCPTGGVTLQNA PAYLALSNTLCVGGSWVAPADLVQAGDWAGITALAAQAAALARG" gene 1092840..1095020 /locus_tag="SKA53_05498" CDS 1092840..1095020 /locus_tag="SKA53_05498" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="methyl-accepting chemotaxis protein McpD" /db_xref="CDD:24241" /translation="MLARWSVAWRINSGFVVLALLIIALSVAAVRAVDNLRSDFATSG QIAAQNMAVGGFIRQMQAAERTVRAYGAAPTDAMAQAVAAHLAALRDNPALSAAFAPS TAARTEIDAVLALAQDYATTFTQIRDLRAAATNPGIALQAKVQDMHGALRSITNSVGV SGRPQLVQAAQTAMHSFDTATLHLDSYLALRNDDDGRAARAALDTFGAAMAQLAQAGA GAYLQNQIAQIADAVPALITDLDRYAASMTQADRLESTVLAPLGQLVLDRLNALLRQI AQAGQAHDDASASLLADLRKLIPMMGLLTALLALLAGYLVARGITHAITRLVEATNRL AAGDTATAVTGGDTDHGLGRLALGLDAIRATQIAQANADAAQNAQQRDQQQVIDMLQS QLVRLAAGDLTVQIDQPFAPAHDNLRQDFNRATDALRALIGQMSQTAGLVAVQTRQAT SATAALSQRIEKQATTLDQTSAALGQLTASLRAVAGDARTVDSTVTAARAQATNNSDV VAQAVAAMAKIGDSSQQMSQVIGVIEDIAFQTNLLALNAGVEAARAGDEGRGFAVVAA EVRTLAQKSAEAAKQITALIARSGKQVQRGTDLVGTAGSALSDISTQVGEIAALTTRI AAGTQDQATALSRITTGVTELDQMTQHQSTMIHDARTRGAQLDQAAAMLTDLTGRFAT GRTPAPLLTETAIIPLEAAIGRTSATLLHPPFKSSQRKAPVPDV" gene complement(1095030..1095305) /locus_tag="SKA53_05503" CDS complement(1095030..1095305) /locus_tag="SKA53_05503" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKGDLHDTKALIREAFCIDGITEAECRSIFLDWVLGLPDGQDIG VAVRAVLTRHADAPAGHPMTRTLQQAVPMAAPPRRRGGRDARLRADS" gene complement(1095302..1098061) /locus_tag="SKA53_05508" CDS complement(1095302..1098061) /locus_tag="SKA53_05508" /note="COG1391 Glutamine synthetase adenylyltransferase" /codon_start=1 /transl_table=11 /product="Glutamate-ammonia-ligase adenylyltransferase" /db_xref="CDD:11106" /translation="MSIARRITRCPRPYDAALGADMLTQLPAFAPEISALLAGTAGCS PYLAGLMRQEKDWLPAALDDPEAAVDGLLVQLDSVTLDALPIHLRQMKRRIALVAALA DLGGVWPLETVTGTLTRFADAAVAACVTRLVAAEVARGKLPLGAPQDAAGMVVLAMGK MGAHELNYSSDIDLICLFDDSRFAPEDVFEARTAFIRVTRRMTAILSEVKDGGYVFRT DLRLRPDASVMPVCLSMEAAERYYESVGRTWERAAYIKARVCAGDQAAGARFLQTLRP FVWRKHLDFAAIQDAHDMRLKIRDHKGLGGPVALAGHDMKLGRGGIREIEFFTQTRQL IAGGRDPALRLRGTGEGLHALAGAGWIGADVADTLLDHYRHHREVEHRVQMFADAQTH HLPQDAAGFDRLAAFMGRDVAELRHDLTRRLADVHVLTEGFFAPDAKPKPQITWGQEV VARWQGYPALRSPRATEIFDRLIPQIMASLQEAARPDEALAQFDGFLAGLPAGVQLFS LFEANPQLTRLIVDIAATAPALAQYLSRNAAVLDAVIGGAFFDPWPGMAALRDQLGAV LATHPDYESQLIAARTWAREWHFRIGVHHLRGLIDAVGSGAQYADLAEAVIAALWPVI VAEFARKHGPPPGRGVAVVAMGSLGAARLNAGSDLDLIVIYDPAGVETSDGPRPLATR AYFARLTQALITALAVPMAAGRLYEVDMRLRPSGRQGPVATSLDAFVDYQNTDAWTWE HLALTRARPITGDANLCAAIEAFRRDLLVRKGQGAPVVADVAEMRMRLAQAKGPGEAW DAKTGPGRLQDIELCAQTAALIAGSPARDVDAQLHAGVAAGWLDAADAQALCDAARLL WKLQAAVKLLTGGGLDPNDLGEGARRMILRETDTQGLDALLAQMTRLHKAADVIISRR LKGTG" gene 1098141..1098611 /locus_tag="SKA53_05513" CDS 1098141..1098611 /locus_tag="SKA53_05513" /note="COG2606 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24712" /translation="MSKSLTRVIRALQDHGVQITPLEMDEQTRTAQQAADAANCALDQ IAKSVIFAGQTSGRAILFITAGGNQVDSSKASVAAGEPLAKADAGLIRAQTGFAIGGV APIGHLTPVRAFFDARLLDFAQIWAAAGTPRHIFPIAPQQLLQISGAQIADFIA" gene 1098723..1099151 /locus_tag="SKA53_05518" CDS 1098723..1099151 /locus_tag="SKA53_05518" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMTTNTAQTYDTSPGFLARTEAWLDARGKGAWIAAMVLGFIVFW PVGLALLAYMIWGKGLFAGSCRKTGKSSITMTKSSGNAAFDAYRNETIRRLEDEQHKF EAFLKRLRDAKDKAEFDAFMDERERKAAAKSAMAPDAPQV" gene 1099288..1100094 /locus_tag="SKA53_05523" CDS 1099288..1100094 /locus_tag="SKA53_05523" /EC_number="2.3.2.8" /note="COG2935 Putative arginyl-tRNA:protein arginylyltransferase" /codon_start=1 /transl_table=11 /product="arginyl-tRNA-protein transferase" /db_xref="CDD:23534" /translation="MRHTLPIAPQFYVTAPQPCPYLAGRMERKLFTALQGDNAPKLND SLSKQGFRRSQNVLYRPSCAECSACMSARINVAAFTPSRSQRRVLARAHHLHRRATSP WATEEQYDLFRAYLDSRHATGGMADMDMFEFAAMIEETPIRSRVIEYTDAGVLQAVCL TDILDDGLSLVYSFFDPALERLSLGTHVILDHVKIAQEMDLPYVYLGYWVPGSPKMGY KAKFAGLEVFRGGTWSPLTAPDSFDTALHPLSSEPIAEQVAKINLPDGRS" gene complement(1100099..1102453) /locus_tag="SKA53_05528" CDS complement(1100099..1102453) /locus_tag="SKA53_05528" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP transporter, DctM subunit, putative" /db_xref="CDD:13807" /translation="MLFGLDGIEIGIIILFLTLFAGILSGFPVAFAISGAAVMSFAII AALDSSGLLVHAGVDMRSDAYRALIAEGVRPDTISVFRYPDLPRFEAPLFPQGWETAL DRNIGFMVNRINEKVLAGNSIEILLAVLMFVMMGIVLERSRIADELLTTMARVFGPLP GGLAVSIVIVGAFLAASTGIVGATVVTMGLLALPTMLKNGYSPQLATGVIAASGTLGQ IIPPSIVIVLLGTLAGDLYATAQEQRAQLAGCNDALTYLGKPAVVSVGALFQAALLPG IMLAVLYALYAFVFALLNPTKAPAVQFSAGTGTKTGSRNDKLTWFLAVPVGIIGLVIG LNGAGVVGSQSVLVGSFTDAGQSASLRTRVSPACADSMIALHGQAAWDSALAEQAQID AAGGVTQARQLSPEERAERVAQRAVDAPPIGTGIAVAAVIMGLMLAVARGVAPLADHR PLLIGAGGIGLLLLVDVLLVSPLTTPGGTVLLIALPLLVAYRGLRVAFGYMGQNDILR VIFPPLVLIVAVLGSIIGGITNPTPAAALGAGGAILLAAYRKRKDQGLSPRIVLLTAG AIIVMLLVGYNFDMRMGREVVPLEDRIAFLVAFGAFLYAMFGLLWACWVLLAGGVLAP VVRETAKVTAMVFAILIGSQLLNLVLISFGGEHYIQQFLRSFDNEWQVFLLVMLVLFI LGFVLDFLEIIYIVIPIVGPVIYGGTFDPKWVTIMIAVNLQTSFLTPPFGFALFYLRG VAPKSITTGQIYRGVLPFIGIQIGALLILAFFPWVVTILPNLLG" gene complement(1102469..1103413) /locus_tag="SKA53_05533" CDS complement(1102469..1103413) /locus_tag="SKA53_05533" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13808" /translation="MGLVEAWGGNAFGWIAAQLIAAFYNIGFALLNPGLWLSWVPQIN GPMDPAAKQALARFIYYGASVELFFAVLVIFAVVTIAGLIFNAFMWRCVRVLEGFANS VGRAAAWAGLLMVLQQIVIIFLQGIFAVSDISIGLGVTFERPVSWWSDELKLYNAIVI TLCATYTFVQGGHVRVDLLYAPMSFRAKRCVDMFGALFFMVPSAIVIWIYGWFFMWRH LVLPNASASDTLDRLMTRSQAFQWNIETISTSANGFDAYFLFKILLLVFTFMVLLQAV AVFYRSLLERKEGEASEAKYLDKDKTGDEIADLSAKIH" gene complement(1103513..1104457) /locus_tag="SKA53_05538" CDS complement(1103513..1104457) /locus_tag="SKA53_05538" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="bacterial extracellular solute-binding protein, family 7" /db_xref="CDD:13806" /translation="MHDSAQYCADMITAMTDGQVTVDLKAAGELVGAFEVFDAVAAGQ ADMYHGVDYYFLGQHPAFSFFSQIPFGMTFMEYSNWINHDGGDVLADELYSIFGLKAF SAGNTGPQSGGWFAKEMNGPEDFQGLRFRMPGQGGQVMGKLGASVQNLPGAEVYQALA SGAIDGTEWIGPWADETAGFQEITKFYYTAGFHEPGPNLNLVLNLDVYESLTPAQQSI VQNASRASSIWTMSLFMARNAAALSRLQAGGVQVLEFADPIWDAFSAAADEVVAEALG DPIYAKCHESYFASMRSSAQWSSISEGAYLAQRNRLKA" gene complement(1104844..1105926) /locus_tag="SKA53_05543" CDS complement(1104844..1105926) /locus_tag="SKA53_05543" /note="COG1652 Uncharacterized protein containing LysM domain" /codon_start=1 /transl_table=11 /product="LysM domain protein" /db_xref="CDD:24199" /translation="MVTTTGMAFKTASALAMALAISAGLVLGGSHAAQAQDLCSRYTI VRGDTLSKIAKATGVQGGFQVLFNANAHVLRSPNLVETGQVITIPCADGSLPSAAPAA NQAAALVPVTADRPLRIVTASGYAPFTDKDLPGGGLFTQLVLRALELGNPAQEVNFFF VNDWNAQLDSLLPSGAVDMAFPWFKPDCDRVEILSPPNAYRCTDFNHSDPFYDALVGY YTLAGSPYDGATDHADLLGARICRPDAWFTFDMEAEGLTEPEITMTRVSQLECWRLLE AGAVDVVTYDALPAEDDMRSLAISERVVSLDALTTTATLHVFVAKTNPEANAALPAMN AGLEQLRLTGEWFSIVRAGIQASLEN" gene complement(1105965..1106075) /locus_tag="SKA53_05548" CDS complement(1105965..1106075) /locus_tag="SKA53_05548" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTRANGSVAFDNKAAVWAVQIGLFADLVNISPFSAG" gene 1106165..1107010 /locus_tag="SKA53_05553" CDS 1106165..1107010 /locus_tag="SKA53_05553" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10495" /translation="MMTDHKPYTPPKVWTWDAESGGKFASINRPIAGATHDKDRPQGE HPLQLYSLATPNGVKVTVMLEELLAAGHKGAEYDAWLIDINKGDQFSSGFVGVNPNSK IPALFDSDTGLRVFESGAILLYLAEKFGAFLPTDIAGRTETLNWLFWLQGSAPYLGGG FGHFYAYAPEKFEYPINRFAMETKRQLDVLDRQLADHAYIAGDSYTIADMAIAPWYGR LVKGGAYGDAATFLDTASYKNVNRWADAVLARPAYIRGQKVNRTWGEPHEQLPERHAA SDFDT" gene 1107112..1108029 /locus_tag="SKA53_05558" CDS 1107112..1108029 /locus_tag="SKA53_05558" /note="COG0530 Ca2+/Na+ antiporter" /codon_start=1 /transl_table=11 /product="putative sodium/calcium exchanger" /db_xref="CDD:10401" /translation="MLTYLILIGGLLGLFLGGDWLVKGASGLALRFGVAPIIVGAVVV GFGTSTPELLVSLQAALGGQPGIAIGNVIGSNIANILLVLGTAALIGPLVLTFADVRK DLLWMTGAVLFLPYAFWSGEVSHVEGLVLIGALAVYLFISLKGSRGEVDDIDAPTSLW IGGGLTILGLVTVMVGAHYLVQSASIIARQFGVSEAMIGLSIVAIGTSLPELATTVMA AIRGERDIALGNIVGSNIFNILAILGITAVVTPIPVDARFLNVDTPVVIGITLLLLAL VYFVGRMNRLVGGGMLVAYVAYIALTAGL" gene 1108270..1110021 /locus_tag="SKA53_05563" CDS 1108270..1110021 /locus_tag="SKA53_05563" /EC_number="1.2.2.2" /note="COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]" /codon_start=1 /transl_table=11 /product="acetolactate synthase III large subunit" /db_xref="CDD:9904" /translation="MSKTMTGAKMVVQALIDQGVDVVFGYPGGAVLPIYDELFQQEKI KHVLVRHEQAAVHAAEGYARSTGKPGVALVTSGPGATNAVTGLTDALMDSIPIIVLTG QVPTFMIGSDAFQEADTVGITRPCTKHNWLVKDTEKLSATLHEAFHVALSGRPGPVLI DIPKDVQFATGTYTEARQVETHYNPQVKGDLAMITELAKAMETAKRPVFYTGGGVINS GTAASQLLRELVAATGFPITSTLMGLGAYPASGDNWLGMLGMHGLYEANMAMHDCDLM INIGARFDDRITGRIDAFSPRSKKAHIDIDASSINKVVHADFPILGDVAHVLEDLLNV WKARGRKTNTEGLAKWWGQIKEWRAVDCLKFTQQGKIIKPQYALERLEALTKKHDRYI CTEVGQHQMWAAQYLGFEDPNRWMTSGGLGTMGYGFPASIGVQMAHPDALVINVAGEA SWLMNMQELGTAMQYRLPVKQFILNNERLGMVRQWQELLHGERYSSSWSESLPDFVKL AEAFGAKGILCSDPDTLDDAIMEMLTHKGPVLFDCLVEKHENCFPMIPSGKPHNEMLL GDASTKDAIQAGGAVLV" gene 1110053..1110616 /locus_tag="SKA53_05568" CDS 1110053..1110616 /locus_tag="SKA53_05568" /EC_number="2.2.1.6" /note="COG0440 Acetolactate synthase, small (regulatory) subunit" /codon_start=1 /transl_table=11 /product="acetolactate synthase small subunit" /db_xref="CDD:10314" /translation="MSPLKIKKGSTSHSAYDLRPSYSDTVERHTLAVLVENEPGVLAR VIGLFAGRGYNIESLTVAEVDHQGHRSRITIVTTGTPQIIIQIKAQLGRIIDVHKVND LTVEGPSVERELGLFKVAGKGEHRVEALRLADIFRANVVDSTLESFVFEITGTPEKID AFADLMRPLGLQEVARTGVAALSRGAV" gene complement(1110761..1111105) /locus_tag="SKA53_05573" CDS complement(1110761..1111105) /locus_tag="SKA53_05573" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSAARGGGKGARLSDRQALVFGVENAQIECIKQTVEATMSRYLL IPAALLLALPALAQSTAIDVNGDGQYSFPEVQAAAPEVSEDNFAALDINGDGLLDAAE IAAGEAAGILPR" gene 1111135..1112073 /locus_tag="SKA53_05578" CDS 1111135..1112073 /locus_tag="SKA53_05578" /note="COG1957 Inosine-uridine nucleoside N-ribohydrolase" /codon_start=1 /transl_table=11 /product="inosine-uridine preferring nucleoside hydrolase" /db_xref="CDD:28386" /translation="MTPRKIIIDTDPGQDDAVAILLALASPEIDLLGITAVAGNVPLP LTEKNARIVCELAGRPDVRVFAGCDRPLSRPLVTAEHVHGKTGLDGPQMADPTMPLQD QHAVDFIIQTLREEPSGTVTLVPVGPLTNIATAFQRAPDIIARVREIVLMGGAYFAVG NITPAAEFNIYVDPEAAKIVFAAGVPLVVMPLDVTHKALTTRARIDAFRAMGTRVGDM VAAWTDFFERFDMAKYGSEGAPLHDPCTVAYLIDPSLFSGRLINVEIETGSELTLGMT VADWWGVTDRPKNALFIGDIDAEGFYALLAERLARL" gene 1112070..1113464 /locus_tag="SKA53_05583" CDS 1112070..1113464 /locus_tag="SKA53_05583" /note="COG0397 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:3203" /translation="MKIAFDNSYAALPAQMFTPQLPTPVAAPAIFARNDALAAVLGID LHAPDAAQIFAGNHIPAGASPIATVYAGHQFGHWNPQLGDGRAILLGEVVGSDGIRRD IQLKGAGPTPYSRSGDGRAWLGPVMREYLVSEAMAALGVPTTRALAAVTTGEDVYRET RLPGAIITRVAQSHIRVGTFQFFAARKDVDALRALTDHVIARHYPQADGPAALLDAVI ARSARLIARWMGLGFIHGVMNTDNVSIAGETIDYGPCAFVDDFAHGAVFSAIDQQGRY AYGNQPQIGAWNMAQFATALIPLMADRDRAVQDFTAAVQGFAPIYAHAWLQVFAAKLG IADPTPEDAALVTDLLNLMAQDGADFTATFAALSDGQARDQFIDHDAFDVWATRWRAR QSPQAAEIMAGANPRVIARNHQVEAAIAAGVSGDFAPFDALLAAVTQPYTDNAAFSRP PSRDERVTRTFCGT" gene complement(<1113563..1114104) /locus_tag="SKA53_05600" CDS complement(<1113563..1114104) /locus_tag="SKA53_05600" /note="COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase, cyclophilin-type" /db_xref="CDD:10522" /translation="MYKHLIALAVLAGPAFGAGLEIDIAGEANGTITIDLFEDVAPLH TAQITAIAAQGGYDNVVFHRVIDGFMAQTGDVENGVMGSDLSRAGMGGSAFDDIPAEF SELPFERGVVGMARSQNPNSANSQFFIMFEPGYFLNGQYTVVGQVTAGMEIVDAIKRG TGANGAVIGQPDMMAAVRVT" gene complement(1114097..1114603) /locus_tag="SKA53_05605" CDS complement(1114097..1114603) /locus_tag="SKA53_05605" /note="COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family" /codon_start=1 /transl_table=11 /product="peptidyl-prolyl cis-trans isomerase, cyclophilin-type" /db_xref="CDD:10522" /translation="MAEIKDPENTIIMTLKDGDVIIQLLPDVAPGHVARMKELARAGA YDNVCFHRVIDGFMAQTGDVANGNMEQDFNIRRAGTGGSDLPDLKAEFSKLPHARGSI GAARSSSPDSANSQFFINFKDNDFLNGQYTVYGQVISGMDHVDAITRGEPPVAPDRMI SVKVAADV" gene 1114639..1115907 /locus_tag="SKA53_05610" CDS 1114639..1115907 /locus_tag="SKA53_05610" /EC_number="2.7.2.3" /note="COG0126 3-phosphoglycerate kinase" /codon_start=1 /transl_table=11 /product="phosphoglycerate kinase" /db_xref="CDD:16561" /translation="MADARKSQGGAVDAGTSLPQQSAKQPRRMDHMGWKTLDDMDFAG KRALVRVDINVPVENGVVTDTSRIERIIPTVDDIHAQGGKVILLAHFDRPKGRVVPEM SLEHIAGTVADVLGLTVTFVSSNYAEAVDEMEDEEVLLLENLRFHPGEENNDAAFAAR LASLGDIYVNDAFSAAHRAHASTEAIAHLLPSCAGRLMEEELGALDAALGNPARPVVA VVGGAKVSTKLDLLGNLVGKVDHLVIGGGMANTFLAAQGINVGKSLCEHDLADTARAI LAKAQATGCEIILPRDIVVARDFKAGAASETCAPDACPDDAMILDAGPATVAYINAVL DRAKTLVWNGPLGAFEIAPFDAATNAAARHAAGLTQAGKLISVAGGGDTVSALNQAGV ADDFTYISGAGGAFLEWMEGKTLPGVAALG" gene 1116085..1117014 /locus_tag="SKA53_05615" CDS 1116085..1117014 /locus_tag="SKA53_05615" /EC_number="4.1.2.13" /note="COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes" /codon_start=1 /transl_table=11 /product="fructose-bisphosphate aldolase" /db_xref="CDD:28138" /translation="MKTTRAVQKILGHYEGETPGVKANLARILMTGKLGGTGKMIILP VDQGFEHGPARSFAPNPAAYDPHYHYQLAIDAGLNAYAAPLGMIEAGADTFAGQIPTI LKVNSANSLIPDAAPKTQAITACVDDALRLGCSAIGFTIYPGSSAALDMFSDIAAMRA EAAAKGIATVIWSYPRGEDLDKDGETAIDIAAYAAQIAALLGAHIIKIKLSTDHLSLP EAKKVYQDKGIDIATQAARVRHCMQAAFNGRRITVFSGGAAKGADAVYDDARAIRDGG GNGSIIGRNSFQRDRADALEMLGKLVDIYRGRD" gene 1117154..1117402 /locus_tag="SKA53_05620" CDS 1117154..1117402 /locus_tag="SKA53_05620" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIVLGLYFTFAAVQGDYGLFKRVEVRAESAALRLELAGLQAEVA RMENLTTRLSDNFLDLDLLDEQARHLLGLIRADEIVIR" gene 1117578..1118594 /locus_tag="SKA53_05625" CDS 1117578..1118594 /locus_tag="SKA53_05625" /note="COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit" /codon_start=1 /transl_table=11 /product="Pyruvate dehydrogenase E1 component, alpha subunit" /db_xref="CDD:10794" /translation="MPMPPKQAAAKSNVSAEELLGHYREMLLIRRFEEKAGQLYGMGL IGGFCHLYIGQEAVVVGLEAAAGEGDKRVTSYRDHGHMLACGMDPKGIMAELTGREGG FSKGKGGSMHMFSKEKHFYGGHGIVGAQVPLGAGLAFSDKYKGNDRVTFAYFGDGAAN QGQVYETYNMAQLWDLPVIFVIENNGYAMGTSVVRSTKSPSLWERGAAYGIKGEEVDG MNVLAVKEAGERAVAHCRSGKGPYILEVKTYRYRGHSMSDPAKYRTRDEVQKMRDERD PIEQVRDMLLTGKHATDDDLKAIDKEIKAIVNDAAEFSKESPEPHLDELWTDIYATEI PQEA" gene 1118598..1119971 /locus_tag="SKA53_05630" CDS 1118598..1119971 /locus_tag="SKA53_05630" /EC_number="2.3.1.61" /note="COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes" /codon_start=1 /transl_table=11 /product="dihydrolipoamide acetyltransferase" /db_xref="CDD:9898" /translation="MAIEILMPALSPTMEEGTLAKWLVKEGDKVSSGDILAEIETDKA TMEFEAVDEGVIGKILIAEGTEGVKVNTAIAVLVEEGESADEAPGQARDAAAPAPAPG PQPSTKAPAVAKPAAPVADVSPDWPADVAMKPTTVREALRDAMAEEMRRDADVFLMGE EVAEYQGAYKISQGLLDEFGAKRVIDTPITEHGFAGIATGAAFGGLKPIVEFMTFNFA MQAIDHIINSAAKTLYMSGGQMGAPMVFRGPNGAAARVGAQHSQDYTAWYMQIPGLKV VAPYSAADAKGLLKSAIRDPNPVIFLENEIMYGKSFDVPVMDDFTIPFGKAKIERAGT DVTIVSFSIGMTYALQAAEKLAAEGISAEVINLRSIRPMDTETILASVRKTNRCVTVE EGWPQGSVGSYISSVIMQQAFDYLDAPVINCTGKDVPMPYAANLEKHALLTVDEVVAA CKQVTYR" gene 1119984..1121294 /locus_tag="SKA53_05635" CDS 1119984..1121294 /locus_tag="SKA53_05635" /note="COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes" /codon_start=1 /transl_table=11 /product="pyruvate dehydrogenase complex, E2 component, dihydrolipoamideacetyltransferase" /db_xref="CDD:10379" /translation="MPTEILMPALSPTMEEGTLAKWHVKEGDKVSSGDILAEIETDKA TMEFEAVDEGIMGKIMIAEGTEGVKVNDVIAVLLEEGESAGDISKVPGEARDASAKKA DAPAPAPGPRAAAAAPAVAPAKDSSRVFASPLARRIAAEKGLDLAGVSGSGPHGRIVK ADVQTAKAGATHAPTTAAAPKAEAPKAATTMATGPSTDAVIKMYDGRPYTEVKLDGMR KTIAARLTEAKQSVPHFYLRRDINLDALMAFRGQLNAQLEGRGVKLSVNDFIIKACAL ALQQVPDANAVWAGDRTLKFAKSDVAVAVAIEGGLFTPVLRDAEMKSLSALSAEMKDL ATRARDRKLAPQEYQGGSFAISNLGMFGIDNFDAIINPPHAAILAVGAGVKKPIVGKD GALAVATIMSVTLSVDHRVIDGALGANLLAAIKDNLENPLTMLA" gene complement(1121350..1122210) /locus_tag="SKA53_05640" CDS complement(1121350..1122210) /locus_tag="SKA53_05640" /note="COG1045 Serine acetyltransferase" /codon_start=1 /transl_table=11 /product="serine acetyltransferase" /db_xref="CDD:10772" /translation="MAPYLGYTGHLENRIDAMRQPKPALTEIDPVWHRIRQEAEDAIV SEPLIGGLVHAGVLHHTTFAAALGYRISLKLASAEMSEQILRETANAAYAADPALALA ARADLVAIYDRDPACHRLIQPLLFFKGFQAVQAYRLGHYLWTQGRRDMAYFIQMRVSE VFGVDIHPAARMGKGIMIDHAHSVVIGETAVVGDNVSMLHSVTLGGTGKEDDDRHPKI GNGVLIGAGAKVLGNIKVGHCSRIAAGSVVLDDVPPMKTVAGVPARIVGEAGCSQPSV TMDHLFDHDH" gene complement(1122176..1122508) /locus_tag="SKA53_05645" CDS complement(1122176..1122508) /locus_tag="SKA53_05645" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRGLQLADLELATRALLLLPACERAALLARLLDMARRGAAHHAA CGTAHPDHGTGTLMSALSRVSIAPRPAVLTRDYLHCLAFVAITIGDVMDDTFDIGDGT LSGLHRTS" gene complement(1122505..1126368) /locus_tag="SKA53_05650" CDS complement(1122505..1126368) /locus_tag="SKA53_05650" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MATIVLAAAGMALGGSVGGTVMGLSMAAAGRAAGAMIGARIDQR LMGAGSAAVDTGRVDRFRLTGAAEGRDIGQVYGRMRVGGQVIWASHFTQSSTTTGGGK GAPAAPRTTTYSYRASFALALCEGPISRVGRIWADGVEIAPDDLNMRVYTGSADQFPD PKMEAVEGAGHVPAYRGTAYVVIEDLDLGGFGNRIPQLTFEVIRAGLDGGLAAVVQGV ALIPGTGEYGLATQPVYLSPRFGEQVAVNMNAPSGQTDYTHAMDALQGDLPACTSLVL VVSWFGDDLRCGDCTVLPKVEQNDVDAQAMPWRVSGLTRATASRVAFDAGAPVYGGTP ADAAVVQAIIDQRARGIAAVFYPFILMEQLAGNDLPDPWTGDIGQPALPWRGRITAAG NGTATAAAEVAAFMGAAQPAHFSVQGTRVDYTGPANGGYRRFILHYAHLCAAAGGVDA FCIGSEMRGLTQVRSSDGSFPAVAALRALAGDVRAILGPDCKISYAADWSEYHGYQPA GTADKIFHLDPLWADPNVDFIGIDNYMPLADWRDGDTHADASAGAIHDLAYLRGNIAG GEGYDWFYPTPEARDAQRREPITDGLGEPWIWRTKDIVNWWGQPHHDRVGGLRSATPT AWVPQSKPVWFTEYGCAAIDKGANQPNKFLDAKSSESGLPHYSNGQRDDLMQMQYLRA MTQHYADPANNPVSSVYGGPMVDTGRMHVWAWDARPYPFFPANRTLWADAGNYARGHW LGGRATNLPLASVVAAICEAAGIVAYDVSRLFGIVRGYLLDHAASGRAALQPLMLAYG FDAVEQGGTLIFRNRTARISAQLGLADLALDPEQDQAWSLTRAPASETAQRVQVLHLD ADGDYEPAAADAAHADATSLAVARHELPLALTRAEGRAIATRWLQEARVARDSITFAL PPSRAVGAGDVVAVDLPGHAGDYRIDRIEDAGLQLVDATRISAGTYQPVRSEDQAAVL KPFAAPVPVELLFLDLPLLRGDEIPHAPHLAVAGAPWPGSVAVYGAAQDSDYALQDII RDPAGIGETLTPLPRGRAGLWDRQAGFDVRLLTGALGSATAQAVLAGANLLAIGDGSP DAWEVLQFRDATPLGAGAFRLRGLLRGQAGSRGIMPDLWPAGSRVVVLDTRVDQLVLA SSARGAARHFRYGPAKRPLGDPSFRYTVAAFQGNGLRPYPVAHLRARQAADGLHLSWI RCSRIDGDLWGDADVPLGEAVESYQLRVIRDGIIRRSVTLDAPVWHYPASLIAADHGG AAYRVEVAQVSDRFGPGPFTARIVG" gene complement(1126370..1126804) /locus_tag="SKA53_05655" CDS complement(1126370..1126804) /locus_tag="SKA53_05655" /note="COG0791 Cell wall-associated hydrolases (invasion-associated proteins)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10659" /translation="MTPPVVLAARDWIGTPYLHQAAAKGVGCDCLGLLRGLWRELHGA EPEQVPAYTPDWSEPQGQERLWQAALRHMPPATGPLAAGDVLLFRMRAGGVAKHLGLV SVTGAAPAFIHAYSGHGVVESPLSAPWARRIAARFLFAQRII" gene complement(1126801..1127682) /locus_tag="SKA53_05660" CDS complement(1126801..1127682) /locus_tag="SKA53_05660" /note="COG5449 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTGLAAHLAGGATQTCHCWAVTRLDGVTLGFTDHDLPLSFDGIR FAPDTGLSARALSSTTGLSVNNTEALGALSSDAISEADITAGRYDGAMVRIWQVRWDA LADRALQFAGILGEITRAKGGFQAELRGLTEMLNQPQGRSYLTQCSAVLGDARCRFAL DDPAYRFSAQPVAVQDNRVFRFAGQAMFNDGWFEAGQLQVTTGPAAGLSGVVKSDRLL NAVREITLWDPIRAGIGVADMLTLTAGCDKAAVTCRVKFANLLNFQGFPDIPGDDWLV AVPRSDSNLTGQSRRNP" gene complement(1127679..1128308) /locus_tag="SKA53_05665" CDS complement(1127679..1128308) /locus_tag="SKA53_05665" /note="COG5448 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFHEIRFPANLSFGATGGPERRTEVVTLANGYEERNTPWAHARR RYDAGLGLSALDDLAVLIAFFEARQGQLIGFRWKDWSDYKSCLPSQDTAGPDQLIGLG DELTTQFQLSKTYRSGETSYIRPITKPVAGTIRVSRGGDAMVAGVDYTVDVTTGIVSF TDPPDIGAQIRAAFEFDVPVRFATDTIRTSMSRFQAGEAPDVPVIEVRI" gene complement(1128319..1128984) /locus_tag="SKA53_05670" CDS complement(1128319..1128984) /locus_tag="SKA53_05670" /note="COG5281 Phage-related minor tail protein" /codon_start=1 /transl_table=11 /product="putative phage tail minor protein" /db_xref="CDD:14403" /translation="MKMNDLDRLDAFDSDISALERSLGDVSAVTAAFEAQLRGTQTAL SDTTRDLGNLERGFSNGLRRALDGLVLDGKTLSDVFAGLGRSMSGTVYNAALKPVTDH FGGMLAGGLNSLVSGLMPFADGAPFSQGRVMPFAKGGIVSSPTTFPMRGGTGLMGEAG PEAIMPLARGPDGRLGVRGGGGGGVHVTMQITTPDVQGFQRSQSQIAQQMARAMQRSQ RNS" gene complement(1128971..1129174) /locus_tag="SKA53_05675" CDS complement(1128971..1129174) /locus_tag="SKA53_05675" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTPLDWAGLMRAGLCSLRLSPAVFWALTPAELQLMLGAQAGPAP MTRAGLDALARAFPDDPIGYEDE" gene complement(1129171..1129485) /locus_tag="SKA53_05680" CDS complement(1129171..1129485) /locus_tag="SKA53_05680" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MANPFAGEVAVTIGDSVIEAKLTLGALAELEATLQTGSLVDLVA RFECGAFSSRDVMAVIVAGLRGGGWRGQADDLLAVDFPGGPLGAARLAARLLARAFTV PQ" gene complement(1129485..1129901) /locus_tag="SKA53_05685" CDS complement(1129485..1129901) /locus_tag="SKA53_05685" /note="COG5437 Predicted secreted protein" /codon_start=1 /transl_table=11 /product="major tail protein, TP901-1 family" /db_xref="CDD:14521" /translation="MVAQNGKDLLIKIDMTGDGQFETLAGLRATRISLNAETVDVTSL DSTGGWRELLGGAGVKTAAISGAGVFKDDATDERARQIFFGGLMPDFQVIIPGFGMLQ GAFQITGIDYAGSHNGEASYEIALASGGALQFVALV" gene complement(1129926..1130339) /locus_tag="SKA53_05690" CDS complement(1129926..1130339) /locus_tag="SKA53_05690" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTYAIAAALQTAVYTRLSADPALATLVGAAIYDAVPAGPLPPLY VVLGNEDVRDASDKTGNGATHALSIDVLSEAAGFAGAKAAAGAVCDALLDAPLTLSRG TLVGLHFTKAKAARTSTGNMRQITLTFRARVADDI" gene complement(1130336..1130674) /locus_tag="SKA53_05695" CDS complement(1130336..1130674) /locus_tag="SKA53_05695" /note="COG5614 Bacteriophage head-tail adaptor" /codon_start=1 /transl_table=11 /product="putative phage tail-head adaptor" /db_xref="CDD:14698" /translation="MSIPQMTRALVLEHRVQTPDGAGGFSSDWQSLGRVWAAIKPGTG REAAALSASLSRVPYQIILRAAPHGAPSRPQPGQRFRLGARLFAIAAVTEADDKGLYL TCTATEEVAT" gene complement(1130671..1131258) /locus_tag="SKA53_05700" CDS complement(1130671..1131258) /locus_tag="SKA53_05700" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMLVEENPVPDAVLPVAQLKEYLRLATGFVDDADQDGLLLRHLR AAMAAIEARTGKILIDRDFTWTLRAWRDPVRQLLPIAPVNAIVHVTQLAHDGAATLTD PATWYLVADATRPALVAKGGVLPPVPPHGSVRIGLMAGFGPDWSDLPADLAQASLMLA AHHYDSRHDMAIAALPPSVTAMVDRFRDLRLGGRA" gene complement(1131413..1132591) /locus_tag="SKA53_05705" CDS complement(1131413..1132591) /locus_tag="SKA53_05705" /note="COG4653 Predicted phage phi-C31 gp36 major capsid-like protein" /codon_start=1 /transl_table=11 /product="major capsid protein, HK97 family" /db_xref="CDD:13797" /translation="MTTPVPKARIAEDLSAPDLTEAIAGFLADFTNFTNGLQAKLQKQ DDRMNKLDRKTMMTARSALTTGAVPDAPHQKAFAAYLRSGDDDALRGLDLDGKALSSV MAADGGYLVDPQTAETIKSTLSSTASLRAVASVVTVDATSYDVLVDHTEMGAGWATET GSMAETTTPQIDRISIALHELSALPKASQRLLDDSAFDIEGWLAGRIADKFARSEAAA FINGDGIDKPKGMLTYPQVENEIWEWGNIGFVATGVSGGIQSGDPIVDLVYALGAVYR ANASFVMNSKTAGTIRKLKDNDGRFLWSDGLAAGEPARLMGYPVLVAEDMPDIAAGSA AIAFGDFGAGYTVAERPDLRVLRDPFSAKPHVLFYATKRVGGAVSDFAAIKLLKFAVS " gene complement(1132616..1132981) /locus_tag="SKA53_05710" CDS complement(1132616..1132981) /locus_tag="SKA53_05710" /note="COG3740 Phage head maturation protease" /codon_start=1 /transl_table=11 /product="phage prohead protease, HK97 family" /db_xref="CDD:13060" /translation="MLWQHDPAQPIGVWDEVVEDAKGLWVRGRLLTDIARAREAASLI AAGAIDGLSIGYRTLRAHKDASGARRLSELDLWEVSLVTFPMLPEARVTAKAQARDTD DLDRLARAFAQARHLLPPL" gene complement(1133145..1133351) /locus_tag="SKA53_05715" CDS complement(1133145..1133351) /locus_tag="SKA53_05715" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDDKVIALRGQRRPPPPASDFWFAQVDLRLGRIESIIARLAWQV WIVVCGCAGLLVIEIVKAITGAIS" gene complement(1133344..1134519) /locus_tag="SKA53_05720" CDS complement(1133344..1134519) /locus_tag="SKA53_05720" /note="COG4695 Phage-related protein" /codon_start=1 /transl_table=11 /product="putative portal protein" /db_xref="CDD:13836" /translation="MFDFLNRKPPAAPQVKTSATGRVVALQGAGRVAWSPRDVVSLTR TGFLGNPVGFRAVRLIAEAAAAIPLVVQDDDHRYDRHPVQALLARPNGAQGRAELLEA LFGQLLLTGNGYLEAVAVDRLPAEIHVLRSDRMAVIPGPDGWPKGYEYSVDGRKHRFA VTEDHSPICHVKSFHPQDDHYGFSPLQACAAAIDVHNAASRWSKALLDNAARPSGAIV YRGADGQSALTSDQYDRLVSEMESQHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFQK TKEAAAREIAIAFGVPPMLLGIPGDATYANYQEANRAFYRLTVLPLATRVASVIADWL SDFSGQRIEIRPDSDQIAALSHERDSLWARVGAAAFLSDAEKRRLLGLPAQEVGQHG" gene complement(1134773..1136053) /locus_tag="SKA53_05725" CDS complement(1134773..1136053) /locus_tag="SKA53_05725" /note="COG5323 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="Putative large terminase" /translation="MQQAFLTSLSDAELQALPYLFAFWAMPHQLPPQGDWRTWVILGG RGAGKTRAGAEWVRRMVASGARRIAVVGETYHQAREVMVFGDSGIMAVCPPDARPKWI ATRQMLVWPNGAQATLFSAQDPEALRGPQFDAAWVDELAKWRKAAATWDMLQFGLRLG DAPRVCVTTTPRRQALLRKLLDRPSTVVTHAPTSANRANLADSFLAEMTAEYAGTALG RQELEGVMLDDVDGALWQMGALAACQVDRAPPLTRIVVAIDPPTTAHAGSDACGIIVA GVVMAGPVQDWRAYVLEDASLQGASPDTWARAAIGAMARHNADRLVAEVNQGGDMVAA VIRQIDPLVPLRAVHASRGKIARAEPVAALYEQGRVRHLRGLGDLEDQMCQMTGAGYQ GRGSPDRVDALVWAIHDLMIGPAQSWRHPQIRGL" gene complement(1136022..1136378) /locus_tag="SKA53_05730" CDS complement(1136022..1136378) /locus_tag="SKA53_05730" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTARHDHDSTAQAKAQAQAQARVAEITTLFARIRALLDHSLRIT DDLTEDTPRTIITRMDQLIAAHLKVLTAEEAFNAAQTANPADSADLDSIRDELGRRFD RLRASLGATGVPDQPE" gene complement(1136538..1137695) /locus_tag="SKA53_05735" CDS complement(1136538..1137695) /locus_tag="SKA53_05735" /note="COG1559 Predicted periplasmic solute-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:17180" /translation="MWRHIAANFLTFFTVALFLLAGAVGWGTKQYRDPGPLAQAICFQ VPSGASMSRVTDTLVAQGAVSNGTILRIGADYSETSGLLKAGSFLVPEAASMEQIMDI ITRGGANSCGTEVIYRIGVNQLQGVVRELDPATNRFVERASFDPLSQDDPAIYTEVRT QADTRFRVVLAEGVTSWQVLNALRGISTLDADVTETPPEGSLAPASYEFTPGAPVSAI LAQMTARQNDTIATAWANRQDGLPLDSPAEMLVLASIIEKETSEIDERRQVASVFVNR LRQGMRLQTDPTVIYGVTRGQGVLGRGIRQSELRDDNPWNTYVIDGLPPTPIANPGQA SIAAAVNPDETDYIFFVANGTGGHTFTTNLADHNRAVAIWRRIEAERESNQ" gene complement(1137695..1138957) /locus_tag="SKA53_05740" CDS complement(1137695..1138957) /locus_tag="SKA53_05740" /EC_number="2.3.1.41" /note="COG0304 3-oxoacyl-(acyl-carrier-protein) synthase" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl carrier protein) synthase" /db_xref="CDD:27989" /translation="MRRVVVTGLGLVTPLADGVEKTWERLLAGASGAGKITGFDPSRL TTQYACEVPLGDGSDGTFNADAYMEPKEQRKVDTFILFGMAAAQQAIEDAGWQPTDPA DLERTGVMIGSGIGGLNSIANTAVMMAEKGPRRVSPFFVPGALINLISGQVSIRYGFR GPNHAPVTACSTGAHAIGDASRLIMFGDADVMIAGGAEAAICELGIAGFNACKALSTA HNDDPTKASRPWDRDRDGFVMGEGAGIVVLEEYEHAKARGAKIYAEVLGYGLSGDAHH ITAPPPDHEGAERAMRAACRNAGIDPAQIDYVNAHGTSTMADTIELGAVERLVGPQAA AKLTMSSTKSATGHLLGAAGAIEAVFSILAIRDQVAPPTINLDNPDVETTVDLCANTK RARRIDIALSNSFGFGGTNASVIFGKIA" gene complement(1139110..1139343) /locus_tag="SKA53_05745" CDS complement(1139110..1139343) /locus_tag="SKA53_05745" /note="COG0236 Acyl carrier protein" /codon_start=1 /transl_table=11 /product="acyl carrier protein" /db_xref="CDD:10111" /translation="MSDVADRVRKIVVEHLGVEEDKVTETASFIDDLGADSLDTVELV MAFEEEFGIEIPDDAAETIQTFGDAVKFISSAQ" gene complement(1139514..1140269) /locus_tag="SKA53_05750" CDS complement(1139514..1140269) /locus_tag="SKA53_05750" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl-carrier-protein) reductase" /db_xref="CDD:25396" /translation="MNKGKQMFDLTGKTALITGASGGIGGAIAKALYDAGATVALSGT RVEPLQALAASLGDRAHVLPCNLSDAEAVTALPKQAADLMGSVDILVNNAGITRDNLF MRMSDEEWSSVLEVNLTSTMRLCKGVIRGMMKARWGRIVNISSIVGATGNPGQANYAA SKAGMVGMSKSIAYEVASRGITVNCVAPGFITTAMTDKLNDDQKSAILTQVPAGRMGE AGEIAAAVLYLASQEAGYVTGSTLHVNGGMAML" gene complement(1140262..1141200) /locus_tag="SKA53_05755" CDS complement(1140262..1141200) /locus_tag="SKA53_05755" /EC_number="2.3.1.39" /note="COG0331 (acyl-carrier-protein) S-malonyltransferase" /codon_start=1 /transl_table=11 /product="acyl-carrier-protein S-malonyltransferase" /db_xref="CDD:10205" /translation="MRAFVFPGQGAQTIGMGRALAMAYPAAKAVFDEVDDALGENLSA LIWEGDIDTLTLTQNAQPALMATSLATIRALEAEGVDVTAARFVAGHSLGEYAALAAA RALTIADTARLLRVRGRAMQDAVPVGVGAMAVLLGLDFDQARAVAEEAAQGEVCEAAN DNDPGQVVVSGHKAAVERALEIAKLKGAKRAMLLPVSAPFHCSLMAPAADVMAQALDG VSITPPVVGLVANVLADVVSDPAQIRKLLVAQVTGSVRWRESVAFMAAQGVTHVYEIG AGKALSGMVKRINRDLAATAIGTPEDVVAMAAALHE" gene 1141369..1142562 /locus_tag="SKA53_05760" CDS 1141369..1142562 /locus_tag="SKA53_05760" /note="COG3038 Cytochrome B561" /codon_start=1 /transl_table=11 /product="cytochrome, putative" /db_xref="CDD:12377" /translation="MSVSNTARSYGTVTKTFHWLTALLILMIAPLGMIAHDLPYGTDA ELAQKAFLFSLHKTLGVTVFFVALARILWALGQVKPGALTAPHSAQAMIASLVHWLLY ISIVAVPLTGWVHHAATSGFAPIWWPFGQDLPLVPKSQSLAEVTAVLHGLFSQIMIAS IALHVAGAFKHHLIDKDATLRRMWFGKTNAAGLGGAHGSWRAPVAALAIFALTGGIGA AVALVQSYDTAAPAQIALEQVSAGWTVTDGQISIGITQLGSNVQGSFTDWTAAINFDP AATGIAGEVSTTISIPSLTLGSVTSQAMGADFFDSATYPTARFTGAIIAEAGSYTADG VLAIKGSEVPVRFPFDLTVAGDTAEMSGTLTLDRRDFGIGASMADESSLGFAVDVTLS VSATR" gene complement(1142653..1143222) /locus_tag="SKA53_05765" CDS complement(1142653..1143222) /locus_tag="SKA53_05765" /note="COG2353 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9823" /translation="MKKILSTAAFAMLLAAPVVAETYVLDASHSQIVFSYNHLGFSTT YGMFSGFDGEIDFDQANPAASSVNVSFPVRTMLTGWEGRFNHFMSADFFDAADDEMVS FTSTGIEVTGDTTALITGDLTLNGVTKSVVLDATLNQAGMHPMENKGWAGFDATTTLL RSDFNVGNFAPFVSDEVEVMISIEAMQAE" gene complement(1143326..1143886) /locus_tag="SKA53_05770" CDS complement(1143326..1143886) /locus_tag="SKA53_05770" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSNDTIMAFFKPQPLVAVEDTYWGYLIRSERGESFGFVLLQSAC LVLGMACLVMAAGVATLTPLMFGVALTPFRMAVVALLGAVAAYLLWFASRGTRTEIHI DTSIREIHQVIRNRAGRPTILQTHDFAQITDIATQRDDASGTALLVLQGNDTVLSICI AMASAPRLDALHDRLARDVIGDPRVT" gene 1144151..1144552 /locus_tag="SKA53_05775" CDS 1144151..1144552 /locus_tag="SKA53_05775" /note="COG0360 Ribosomal protein S6" /codon_start=1 /transl_table=11 /product="ribosomal protein S6" /db_xref="CDD:10234" /translation="MPLYEHVMIARQDLSNTQAEALIEHFGTILADNGGKLLENEYWG VKTMAYKINKNRKGHYALLRTDAPAPAIQEMERLMRLNEDVMRVLTIKVDAHEDGPSV QMQKREERGDRGDRPDRGDRGDRGGERRERR" gene 1144572..1144799 /gene="rpsR" /locus_tag="SKA53_05780" CDS 1144572..1144799 /gene="rpsR" /locus_tag="SKA53_05780" /note="COG0238 Ribosomal protein S18" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S18" /db_xref="CDD:1634" /translation="MATKPFFRRRKSDPFEGTDAPKIDYKDTRTLQRYISERGKIVPA RITAVGSKNQRALARAIKRARFLALLPYAVK" gene 1144809..1145390 /locus_tag="SKA53_05785" CDS 1144809..1145390 /locus_tag="SKA53_05785" /note="COG0359 Ribosomal protein L9" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L9" /db_xref="CDD:10233" /translation="MDIILLERVAKLGQMGQVVSVKDGYARNFLLPQGKALRVNAANM ARFEAEKAQLEARNLETKKEAQALADKLDGQRFVVIRSASDGGALYGSVTPRDAAEAA TKAGFSVDKGQIVLTGAIKDLGLHDVLVNLHPEVTATITLNVARSAEEAQLQEAGKSI AELAAEEEAAAEFEIQELFDDIGGAADGEDDRD" gene 1145583..1146101 /locus_tag="SKA53_05790" CDS 1145583..1146101 /locus_tag="SKA53_05790" /note="COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins" /codon_start=1 /transl_table=11 /product="acetyltransferase, putative" /db_xref="CDD:11381" /translation="MLELAPLARTDIDALAFAASDPAIWAGHPARNRHQRDVFDGYFT ALLDVGGTLLVRDRATDAVIGCSAYYTDPSAPSRLSIGYTFLTCAYWGGATNYALKSL MLGHLYQHHSEAWFHIAPQNIRSQTATMKLGAVLAHDADLDLGGGHQLWRCYCLSRES WTHKVSSRGTKT" gene complement(1146279..1147610) /gene="tig" /locus_tag="SKA53_05795" CDS complement(1146279..1147610) /gene="tig" /locus_tag="SKA53_05795" /note="COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)" /codon_start=1 /transl_table=11 /product="trigger factor" /db_xref="CDD:10415" /translation="MQVTETLNDGLKRGYAITVTAAELDAKVEEKLKEAQPTIEMKGF RKGKVPMALLRKQYGERLMGEAMQDSIDSAVRDHLDSSGDRPAGQPEMKMSNPDWKPG DDVLVDVSYEKLPDIPAVDFAKITLERMVVKADDAAVQEALDNLAASPQAMTYETKKT QAKKDDQVVLDFVGKVDGEAFEGGTAEDYPLVLGSNSFIPGFEDGLLKVKTGDVKDVE VTFPEEYQAAHLAGKTAVFTCTIKDVRAPKAPEINDELAAKFGAEDLATLKTQIADRL EAEYSGASRALAKRALLDALDGVVSFELPKALVEAEANQIAHQLWHEENPDVHGHDHP EITPTDEHQSLAQRRVKLGLLLADIGQKADVKVTDQEMTQAIMNQARQYPGQERQFFE FVQQNAQFRQQLQAPMFEDKVVDHIFAAATVTEKDVSKEDLQKAVEKLEEE" gene complement(1147637..1147718) /locus_tag="SKA53_t06032" tRNA complement(1147637..1147718) /locus_tag="SKA53_t06032" /product="tRNA-Leu" gene complement(1147924..1148169) /locus_tag="SKA53_05800" CDS complement(1147924..1148169) /locus_tag="SKA53_05800" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGTIRGKVLMRMHRRKQIYVITSWAVCTNNMLNENFKAHLLTYL LRLAQTASIAQVLIVAAVAGGGHTAGASPRTPGIFGL" gene 1148221..1148559 /locus_tag="SKA53_05805" CDS 1148221..1148559 /locus_tag="SKA53_05805" /note="COG0347 Nitrogen regulatory protein PII" /codon_start=1 /transl_table=11 /product="nitrogen regulatory protein P-II" /db_xref="CDD:10221" /translation="MKKIEAIIKPFKLDEVKEALQDMGVQGLSVVEVKGFGRQKGHTE LYRGAEYVVDFLPKVKIEVVLPDDQVDGAIEAIISAAKTDKIGDGKIFVSSVEQAIRI RTGESGDEAL" gene 1148630..1150036 /locus_tag="SKA53_05810" CDS 1148630..1150036 /locus_tag="SKA53_05810" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="Glutamine synthetase class-I" /db_xref="CDD:22916" /translation="MDKKAVLKLIKDEEVDYVDIRFTDPRGKLQHVTVVADLVDEDFL DEGFMFDGSSIAGWKSIDQSDMKLMPDASSAYVDPFYAEKTICIHCNVVEPDTMEPYD RDPRGTAVKAEEYLKSSGVGDTAYFGPEAEFFVFDDVRFSVSMNKVSYQVDALDGAWN TDTEYEMGNTGHRPGIKGGYFPVNPIDDAQEMRSEMLSTMKRMGMKVDKHHHEVASCQ HELGLIFGTLTKQADEIQKYKYVIHNVAQAYGKSATFMPKPIAGDNGTGMHVNMSIWK DGKPLFSGDKYADLSQEALYFIGGILKHAKALNAITNPTTNSYKRLIPGFEAPVLRAY SARNRSGCVRIPWAESPKAKRVEARFPDPAANPYLAFAALLMAGIDGIKNKIDPGPSS DKDLYDLPPEELASIPTVCGSLREALQELEADHEFLLAGDVFTKSQLEGYMALKWEEV YAYEHTPHPIEFKMYYSC" gene complement(1150329..1150934) /locus_tag="SKA53_05815" CDS complement(1150329..1150934) /locus_tag="SKA53_05815" /note="COG1268 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="bioY family protein" /db_xref="CDD:10984" /translation="MALALNKSVMTEVFGPSEGTALRVKQALMVVLGIVLLAVMAKIK VPVPGSPVAISMGTFAVLTIGAAYGPRLGLTTLLGWMIVGMLGFDVFQSSTADLNGIS YMMGSTGGYLVGYVLATLALGYAARAGWDRSVVLMALAMLIGNVLIYVPGLAWLAVLY GLDQPILAWGLTPFLLGDALKLGLAALLVPGLWKLIGDARK" gene complement(1151022..1151375) /locus_tag="SKA53_05820" CDS complement(1151022..1151375) /locus_tag="SKA53_05820" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQGDFTGMAVLNPAGEHGLIYTETGQMRIGAAPVMQAVRRYLWE VAEGLVTVRFEDGRDFHSFAPAGQAAGTDHPCGDDHYTVVYDFTRWPDWRATWDVRGP RKDYTSVTDYRRRVD" gene 1151537..1152844 /locus_tag="SKA53_05825" CDS 1151537..1152844 /locus_tag="SKA53_05825" /EC_number="4.3.2.2" /note="COG0015 Adenylosuccinate lyase" /codon_start=1 /transl_table=11 /product="adenylosuccinate lyase" /db_xref="CDD:9891" /translation="MIPRYSRPDMTAIWEPATKFRIWYEIEAHACDAQAAIGVIPAEN AAAVWKAKDATFDVARIDEIEAVTKHDVIAFLTHLAEIIGQDTARFVHQGMTSSDVLD TTFNIQLVRASDLLLAGMDRVLAALKTRALEHKDTVRIGRSHGIHAEPTTMGLTFARF YAEMDRNRARLVNARAEIATGAISGAVGTFANIDPSVEEHVCAQLGLIPEPISTQVIP RDRHAMFFATLGVIASSIENIAIEIRHMQRTEVLEAEEFFSAGQKGSSAMPHKRNPVL TENLTGLARLVRMSVIPAMENVALWHERDISHSSVERAIGPDTTITLDFALHRLAGVI EKLVIYPENMLANMNKFRGLVMSQRVLLALTQAGVNREDAYRLVQRNAMRVWEQGADF KTELLADADVLAALSPAEIEEKFDLGYHLKHVDTIFARVFGAQ" gene complement(1152871..1153509) /locus_tag="SKA53_05830" CDS complement(1152871..1153509) /locus_tag="SKA53_05830" /note="COG3916 N-acyl-L-homoserine lactone synthetase" /codon_start=1 /transl_table=11 /product="Autoinducer synthesis protein" /db_xref="CDD:13227" /translation="MENITFNLLDLHRHGPAFFEFLALRKRFFVDQLGWDIPHDDQVE MDQYDNPKAYYSLVLRDGKVIGGMRAMATTAQWGAHTYMLRDAVDGKLIGIPADIIPH AEVTPMVWEATRVVISDDVTTQADRAACLSLVLDGIVAQARAHGATEIIALCPPVFAR TLRQLGFAARIIGDSYVNLHDARRYVAMRMPAVMRRSQPTTRSQRPQADAPL" gene complement(1153629..1154237) /locus_tag="SKA53_05835" CDS complement(1153629..1154237) /locus_tag="SKA53_05835" /note="COG2771 DNA-binding HTH domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LuxR family" /db_xref="CDD:23458" /translation="MSVLIGPAEIGQLAPAGYYIALRIGFAFPIEETNALSSDWIDHY TKQRFMLYDPTVRWAYSNVGCIRWSEITLDDPKRVLAQARSFGMRYGLTVSVFDASKD QQRSLASFTRSDREFSTLEAKLLQVYLTRRHTETAPPTNLTKAEIEALGMIKDGRRLK EIAFQLKVSEGAVKQRLKNAKLKLGAKTGTQAAALASQYGLI" gene 1154481..1154861 /locus_tag="SKA53_05840" CDS 1154481..1154861 /locus_tag="SKA53_05840" /note="COG2771 DNA-binding HTH domain-containing proteins" /codon_start=1 /transl_table=11 /product="possible transcriptional activator" /db_xref="CDD:23458" /translation="MFQTYPKAWLDYYSGNGLIMSDPMVAWGFENAGIARWSELDDPA GVMHKAAEFGLAHGVVIVALSNDDRSICGFAKNTAEFTDTEIDELAENVAALHALTAD LLRLDPETVAQLRKMSIMVTHPGS" gene 1154908..1155945 /locus_tag="SKA53_05845" CDS 1154908..1155945 /locus_tag="SKA53_05845" /note="COG1536 Flagellar motor switch protein" /codon_start=1 /transl_table=11 /product="possible flagellar motor switch protein (fliG)" /db_xref="CDD:11250" /translation="MSYMSDIHSAAAMTRRRKAAIVVQMLIADGGSMPLADLPEHLQE LLTGELARLRRLDRVTMDAVAEEFASELDAMGMAAPGSRDNAITALADHLSPSLASRL QAQMDSVRNGDHWPVVADLAVPVLARIMQSESIEICAVTLSKLPVAKAAEVLAKTPGD RARRITYAMSVTGDVTPDVVRRIGRALAQEYAHPPATAFDKAPVQRLGAILNSATTDT REDVLEGLGAKDPDFASDVRKAIFTFKDIAPRVKPNDISTCTRAVDAAVLSTAIAAAL AGDADVVASAEYVLANLSQRMAAQLREDAAERGPIKKADAEAAMSAITTAVRELADGG LIVLRDPDQEE" gene 1156125..1157117 /locus_tag="SKA53_05850" CDS 1156125..1157117 /locus_tag="SKA53_05850" /note="COG1560 Lauroyl/myristoyl acyltransferase" /codon_start=1 /transl_table=11 /product="putative lipid A biosynthesis lauroyl acyltransferase" /db_xref="CDD:11273" /translation="MVPRIAPPLRTDTDAGRDRPRQSAQDRPRHGSTAAVTNPDQITG SLADRAADLALRGLIGSARRLPYAARVRLMGAVLARGIAPLAGYRKRAETHLALIYPD METADRRRLARACCDNFGRTLIENYCWRDLAIHLAGTLPTGPGVAALEQAAAAKRPVI FATGHFGNHEAPRQVLTGLGYDIGGLYRPMQNAFFNAHYARTMTSWGGPVFAQGRQGT MGFVRHLRGGGMGTLLFDVAANGPAIPFMGQPAHTATSIADIALRTDALVIPYYGLRQ PDGLSFAVVLDAPIDTGTPLAMMQALTASLERQIAANPAQWFWVHRRWKPRTGS" gene complement(1157114..1157803) /locus_tag="SKA53_05855" CDS complement(1157114..1157803) /locus_tag="SKA53_05855" /note="COG5429 Uncharacterized secreted protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26873" /translation="MRHLRVALGLIGLLATQAAAQDNAVVVELYTSQGCSSCPPADDM LRALAPRDDVIALALHVDYWDYLGWVDLFGKAEHTARQQAYARAAQAKMIYTPQMIVG GIDQIVGSRPMQVMDALQAHASQPYPFDLRLVRSGDLVSLNAGPGAVGVYDVQLVRYV PHQTVAIRNGENAGNTVDYANIVTSWVLLGQWDGAAPLAMQVQADGPEAVVAIIQQAG HGAIMGAARLR" gene 1158034..1160811 /locus_tag="SKA53_05860" CDS 1158034..1160811 /locus_tag="SKA53_05860" /EC_number="4.2.1.3" /note="COG1048 Aconitase A" /codon_start=1 /transl_table=11 /product="aconitate hydratase" /db_xref="CDD:10774" /translation="MTVTVGKDTAKTRKTLTVGDQSVAYYSIPAAQAAGLGDFSKLPA ALKVVLENLLRFEDGGFSVSVDDIKAFSDWATMGGKNPREIAYRPARVLMQDFTGVPA VVDLAAMRDGIKALGGDAQQINPLNPVDLVIDHSVMIDEFGNPRAFQMNVDREYERNM ERYQFLKWGQKAFQNFRVVPPGTGICHQVNLEYLAQTVWTDTDQNGELVAYPDTLVGT DSHTTMVNGLAVLGWGVGGIEAEAAMLGQPVSMLIPEVVGFELTGAMTEGTTGTDLVL KVVEMLRKLGVVGKFVEFYGAGLDNLPLADRATIANMAPEYGATCGFFPIDNETLRYL RNTGRDEDRIALVEAYAKENGFWRGADYAPVYTETLSLDMGTVVPAISGPKRPQDHIN LDVAGKAFGDYVKGVRGGVTATAKEEVRWEGEGGQPEPVNIPCDEGHHSRGYVKTADG SYQLHDGSIVIASITSCTNTSNPYVMIGAGLVARKARALGLNRKPWVKTSLAPGSQVV SEYLEAAGLQEDLDAIGFNLVGYGCTTCIGNSGPLDPAISKAISDYDLIATSVLSGNR NFEGRISPDVRANYLASPPLVVAYALVGDMNINIATDVIGQDQNGNDVYLRDIWPTSA EINALVERTVTREAFIKKYADVFKGDEKWQAVETTDSETYDWPASSTYVQNPPYFRGM SKDAGTIQNVHDAKVLAVLGDMVTTDHISPAGSFKDTTPAGQYLIARQVPVREFNSYG SRRGNHEVMMRGTFANIRIKNEMLDGVEGGYTTGPDGAQTSIFDAAMAHQENGTPLVI FAGEQYGAGSSRDWAAKGTALLGVKAVIAESFERIHRSNLVGMGVVPFEFTGGDTRKT LGLTGDETVTILGLDAVKPLQDMTAQITMADGMVKNITVKCRIDTAVEIEYIENGGVL HYVLRNLAKVA" gene complement(1160887..1161426) /locus_tag="SKA53_05865" CDS complement(1160887..1161426) /locus_tag="SKA53_05865" /note="COG0526 Thiol-disulfide isomerase and thioredoxins" /codon_start=1 /transl_table=11 /product="periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily" /db_xref="CDD:10397" /translation="MARLSPLMIVPPVVFAAFAGLFLAGLLRDNPEELPSTFVGRQAP PVPAEAVAGTVQLTDADLRSGEVTIVNFWASWCPPCRAEHPNLLALQDQGYRVAGINF RDQQPQASGYLVDYDDPFFATGFDLRGRSAIDWGVTAPPETFIVDGDGMVLFRFIGPL VGSDYEQRFLPELAKATGG" gene complement(1161419..1161562) /locus_tag="SKA53_05870" CDS complement(1161419..1161562) /locus_tag="SKA53_05870" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPDLGTYAVEVTAAYVGSIALLAGILGLSWRRYLRVRAALDEVE KNG" gene complement(1161555..1162247) /locus_tag="SKA53_05875" CDS complement(1161555..1162247) /locus_tag="SKA53_05875" /note="COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component" /codon_start=1 /transl_table=11 /product="ABC heme exporter, inner membrane subunit CcmC" /db_xref="CDD:10623" /translation="MSWTRSVLPWTFGLAGVCLVVGLIWGFFFTPNDFRQGSTVKIIY LHVPAALMAINAWIMMLVASMIWVVRRHHVSALAARAAAPVGVVMTLIALWTGAVWGQ PMWGTWWAWDPRLTSFLILFLFYLGYIALWEAIEDPDTAADLTSILCIVGSIFAILAR YAVFFWNQGLHQGASLSLDAEKNVADVFYYPLLICIAGFVLLFVALVLMRTRTEIRVR RIRALQARGQHA" gene complement(1162326..1162982) /locus_tag="SKA53_05880" CDS complement(1162326..1162982) /locus_tag="SKA53_05880" /note="COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component" /codon_start=1 /transl_table=11 /product="ABC heme exporter, inner membrane subunit CcmB" /db_xref="CDD:5137" /translation="MIALLKRDLRLALRAGGGFGLGLAFFLIVVVLVPFGVGPDRDVL SPIAPGILWIGALLAALLSLDRIFALDFEDGSLALLATSPLPLEAAGLIKACAHWITT GLPLTLAAPLFGFLLLMTPEAYGYLLASLLIGTPALSMIGTFGAALTVGLRRGGLLLS LLVLPLYVPTLIFGAEAVRRGAAGLDASGALILQGGITAGCFAILPFATAAVLRINLR " gene complement(1162979..1163593) /locus_tag="SKA53_05885" CDS complement(1162979..1163593) /locus_tag="SKA53_05885" /note="COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component" /codon_start=1 /transl_table=11 /product="ABC heme exporter, ATPase subunt CcmA" /db_xref="CDD:13414" /translation="MLHVVGLGCARGGAAVLSNVSFDLVAGQALVLRGPNGIGKTTLL RTLAGLQPPITGDVVMPEETAAYASHADGIKTALTVTENLAFWAEVYGMPLDLAVLDR FDLAGLRNRQGGTLSAGQKRRLGLARLAVIGRKILFLDEPTVSLDTGSVAMFARWLQG DHLAQGGIAVIATHIDLGLDAPVLDLTPFQSAPGTGGGTDEAFL" gene complement(1163594..1163947) /locus_tag="SKA53_05890" CDS complement(1163594..1163947) /locus_tag="SKA53_05890" /note="COG3737 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15932" /translation="MRLNEIRYNDSVPIDGYGPGFFRIGGKVVQGAVLVFPTGVSPWD GFTDTGAIIDRMADVDVVFVGTGAEIAHLPADFRSTLEQAGIGVESMASPAACRTYNV LLSEGRRVAVALIPV" gene complement(1163960..1164928) /locus_tag="SKA53_05895" CDS complement(1163960..1164928) /locus_tag="SKA53_05895" /note="COG0341 Preprotein translocase subunit SecF" /codon_start=1 /transl_table=11 /product="protein-export membrane protein SecF" /db_xref="CDD:8264" /translation="MRLRLVPEQTNINFFRYAWLSFGASALMVVMSLVVFVVYGLNFG IDFRGGTSIRTESTQSVDVAAYREALNPLELGDISITQVFDPTFDDDQNVAMIRIQAQ DGDESISPQTIAQIQDALRGVAPDITFPSVESVGPKVSGELIRTAVMAVLGALTAIVI YIWLRFEWQFAVGAVAALIHDVALTIGIFSMFQIRFDLAIIAALLTIVGYSINDTVVV FDRARENLRKYKAKPLVDVLNLSANETLSRTIMTSGTTLIALIALLVLGGDVIRGFVF AIAWGIIVGTYSSLYVAKNIVLMLGVKRDWSKKDPAAGTKYGHIDS" gene complement(1164933..1166564) /locus_tag="SKA53_05900" CDS complement(1164933..1166564) /locus_tag="SKA53_05900" /note="COG0342 Preprotein translocase subunit SecD" /codon_start=1 /transl_table=11 /product="protein-export membrane protein SecD" /db_xref="CDD:10216" /translation="MIWLTVVVGLMLALPNGFYSRVEVANDARALIATGQTSAALEHD AGLWPSFLPSTLVNLGLDLRGGAHLLVEVAVQDVHASFLEGFWPQVRDVLAAERDVVG FVTREEGPASELRVRISDAAGAARAFELVRGLGRPVTSFTGAAASNIDVRINGTLLTI TINEAEMSAMNERTMLQTLEIIRRRIDEVGTREPTIQRQGLERVLVQVPGVGSAQEIK DLLGTTAQLTFNPVVARTSNANQSPGTGNFLVPSLDDPGLFYILERRPVVTGEQLENA QLDFDQNGRAAVGFRFNTSAARVFGDYTLANIGSPFAIVLDNEVISAPTIQSHIPGGS GIITGNFTTEEATNLAVLLRAGALPAELTFLEERTIGPELGQDSIDAGRLAALVGGLL VVLFMGLSYGLFGWFANTALVINLGLIFGVLSLVGATLTLPGIAGIVLTVGMAVDANV LVFERIREELKTAKGPARAIELGYERALSAITDSNFTTFMVAVILFALGSGPVRGFAI TLGLGIITSVFTAIFVTRSLISIWFAYRRPKTIEV" gene complement(1166616..1166897) /locus_tag="SKA53_05905" CDS complement(1166616..1166897) /locus_tag="SKA53_05905" /note="COG1862 Preprotein translocase subunit YajC" /codon_start=1 /transl_table=11 /product="preprotein translocase, YajC subunit" /db_xref="CDD:11572" /translation="MRAADLVMLLLIFGIMYFLLIRPQQKRVKEHAAMLAALRRGDQV VTQGGVVGKIVKVKDEVSEVEVEIASGVIVRVMKPTIVSVLNKTEPTKT" gene 1167147..1168439 /locus_tag="SKA53_05910" CDS 1167147..1168439 /locus_tag="SKA53_05910" /EC_number="6.1.1.11" /note="COG0172 Seryl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="seryl-tRNA synthetase" /db_xref="CDD:10047" /translation="MHDIRSIRDTPDAFDTALSRRGLAPVAATILDLDEARRKLILAA ETAQAEANKASKDVGAAKARGDDAEFDRLRGLIADSKSRIAAMNDEAKAKDQALSDLL ATLPNLPDPSIPDGKDEADNVEIRRHGTPRIFSFAPVEHYDIAGIKQGMDFETAAKLS GSRFVLLSGAVARLHRALAQFMLDLHVEEHGLTETITPVMVREDMMYGTGQLPKFGED SYQTTNGWWLIPTAEVTLTNIVNGETVDESTLPRRHVAHTLCFRSEAGSAGRDTSGML RQHQFEKVEMVSITTPNQSAAEHDRMTQCAQTVLERLGLPYRTVVLCAGDMGAGATKT HDIEVWLPGQNTYREISSVSVCGDYQARRMNARFRPAGGGKPEFVHTLNGSGLAVGRT LIAVVENGQQEDGSVDLPAALHPYLGGKTRITAEGMLE" gene 1168436..1169146 /locus_tag="SKA53_05915" CDS 1168436..1169146 /locus_tag="SKA53_05915" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTHIRAYLTLLFTVTFVTSPLFTSPFSGFRADQLPIPQIDPPIQ PAGYAFAIWGLIYGWLVVSAVYGLWKRRGARAWDRVRLPLLISLALGTPWLAVANASP IWATVLIFAMAVPAIWAVMVAPRTDRYWLRAPVSIYAGWLTAAAFVSLGSTAAGYGVL MGALGWAYVGIIAALGVAVFTQWRSRAPGYGLTVIWALFAIIMANGTAALGVSLLAGA GIAVMTILAITTTGRPIS" gene complement(1169136..1170593) /locus_tag="SKA53_05920" CDS complement(1169136..1170593) /locus_tag="SKA53_05920" /note="COG1160 Predicted GTPases" /codon_start=1 /transl_table=11 /product="GTP-binding protein EngA" /db_xref="CDD:10879" /translation="MTFTLAIVGRPNVGKSTLFNRLVGKKLALVDDQPGVTRDLREGE GRLADLRFTVIDSAGLEEATDDSLQGRMRRLTERAVEMADVCLFMIDARAGVLPADQV FADILRKKNANVILAANKGEGRAADNTILEAYALGLGEPIRISAEHGEGMGELMDVLR PISDAFEERAALDAPETDVDVGEDDEDAPRVPTIAKPLQIAVVGRPNAGKSTLINKII GEERLLTGPEAGITRDAISVKQVWAGPDGIGVPMRIFDTAGMRRKAKIHEKLEKLSVS DGLRAVKFAEVVVVLLDVEIPFEQQDLRIADLAEREGRAVVIAVNKWDTEDDKQDKLR ELRESFERLLPQLRGAPLVTVSAKTGKGLDKLQQAIMRAHDVWNRRVTTAQLNRWLIG MLEQHPPPAPGGKRIKMRYATQVKTRPPAFVVMTSHPDLMPESYKRYLVNGLRADFDM PGTPIRLYLRDQGDKNPYKDKKSSQPSRLSKHLKK" gene complement(1170642..1171925) /locus_tag="SKA53_05925" CDS complement(1170642..1171925) /locus_tag="SKA53_05925" /note="COG1520 FOG: WD40-like repeat" /codon_start=1 /transl_table=11 /product="putative quinoprotein" /db_xref="CDD:11234" /translation="MTLRPFIGAAFVLSVLAACGEEQIILPGDRFDIRDTAPVVNQTL PLALPQAQVNADWTQRAAIPAHPALGAALQPVFVADIGQGDSRRARLTGEPVVVDGVI YTVDSGATVTATGAAGQTIWQRDLTPDRFNAGQASGGAVSFGGGRVYVTTGFGEISAL DPATGAVIWTKTLNAPVNAPATINGDLVYVVARDSTAWALDAATGLTRWQQSGTPSLT TFAGSAAVAVSGETVVIPFPSGEILATYPQGGLPRWTNVVAGDRLGRAASLVSDIAGA PVIDAGRVYAASFGGRSVAFDIRDGSRIWTAGEGAVGPIWPAGGSLFMVNDISELVRL DAATGAPVWRVDLPDFEGDNTGRQRSVIAHFGPVLAGGRLIVASSDGVIRQFDPASGA LIGTIGLPGGAASAPVVAGQTLYVISKTGQLHAFR" gene complement(1171954..1172661) /locus_tag="SKA53_05930" CDS complement(1171954..1172661) /locus_tag="SKA53_05930" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNPAMIMPLAAQKGAGMSNPDSFIDEVTEEMRRDKLFGYLRRYG WVAVLIVLGIVGGTAWNEYRSAQDRAAAQAAGDALLAALAENDEAARATAMAAVSAAG NAAVITALLTASTQQQAGQAEAAAASLSALATNADTTAIYRDLAAIKAAMLPVGDMPA RLAALAPLAQPGQPFRLLALEQMAYLTLETGDQTGAVAILRQIAEDAAVTRGLSDRVQ TLLIALGEDAAGAALAQ" gene 1172862..1174079 /locus_tag="SKA53_05935" CDS 1172862..1174079 /locus_tag="SKA53_05935" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="efflux transporter, RND family, MFP subunit" /db_xref="CDD:11279" /translation="MRLMSMFAAVVVAAILYLIVFQRDQLLGFAGADSDTPVTVAMSD TATAQGIGVIAIRAQAQAIDSAVLLRGQTAAARDVTVAAETSGLVVSEPLPKGSFVNA GDTLCTLDPGTRAATLAEARARLSEAQSRVPEAEAGVIEAQARVREAEINLNAARALS QDGFASETRVVGAQAAMESASAGVQRARSAVSSALAGIESAQAAVASAERDIARLVIT APFEGLLETDTAELGSLMQPGAPCATIIQLDPIRLVGFVPEADVGRITVGAMAGGRFS DQQEVVGEVTFLSRSADPVTRTFRVEVTVPNPDLAISDGLSAEIIVAADGQSAHLIAQ STLTLNDAGTLGVRIVGPDMTAQFMPVTLLRDTAEGVWVAGLPDAVDIITLGQEFVID GVPIVPTYAEANQ" gene 1174076..1177756 /locus_tag="SKA53_05940" CDS 1174076..1177756 /locus_tag="SKA53_05940" /note="COG0841 Cation/multidrug efflux pump" /codon_start=1 /transl_table=11 /product="transporter, AcrB/AcrD/AcrF family" /db_xref="CDD:10708" /translation="MIGIVDWAASRARMVLAFIALSLIAGGAAYVSLPKEGEPDIEIP AVFVSVPFPGISAADSETLLVRPMETELSDLDGLKTMTATAAEGFAGMALEFEFGWDK TKIIADIRSSMNNAQASFPAGADQYSITEINFSEFPIIIVNLTGDVPERTLLRTAKSL QDRIENIDAVLEAGLAGQRDEMLEVLIDPLRLETYNVTAGELIGVVTNNNMLIAAGEV DTAQGTFAVKIPSSFNSPQDVYDLPVKTNGDSIVTLGDLATIRLTFEDRVGVARFNGV NTVALQVVKRKGFNLIDTTALVRDAVAAERATWSPELRAAITIGTSNDQSRSVASMVS QLEGSVLTAIALVMIVVLASLGTRSALLVGFAIPTSFLLCFALLAVMDITISNIVMFG LILAVGMLVDGAIVVVEYADKRIQEGTGPMSAYTEAAKRMFWPIISSTATTLCAFLPM LFWPGVPGQFMGMLPVTLIFVLCASLVVALVYLPVMGGVTGRMSRAFGKSSDMLRARL PWAACAALVVPAIMVVFTGAMLVLNPAYLSGDAVQTTGFVASLPGIVLFLGGAVGLSI TLGAARIERPAKRIKAGYQRSPFGRVMHFIVGNPVMPLVTIAAVIFTVVSIFGYYGAN NNGVEFFVESEPEQAIVYVRARGNLSLAEKDALVRQAEQIVLAHPGVITAFSFAGDGG LNTDASGASTPRDTIGQVQLETIPWEDRAGIAALDGDLVLAQLQDQLNTIPGIETEIL AQARGPASGKPVHLRLKGDDWDDLISAAQITRAHFAQTPGLITIEDSLPLPGIDWQID VDVATAGRFGADVASVGGMVQLVTRGILLDTMRVDSSDEEIEIRVRLPEQDRVLSTLD TLRVRTADGLVPLSNFITRTPVAKLAQIDRIDQQRYFDVKAGVTSGLTNLLADGSAVA VAQVDRSATGMARYGDVTLLDGTTADRFAQLVADGAITETPLNANERIAMLTDWLSDN PLPAGVAWEWTGDQEEQAESGAFLMTAFAGALGLMFIILLAQFNSIYNSVLVLLAVVL STAGSLVGMLVMDQAFSIIMTGTGIVALAGIVVNNNIILIDTYQDYSRYMPKTEAITR TAEDRIRPVLLTTITTMAGLAPMMFGLSLDFMQGGYSIDSPTALWWKQLATAVVFGLG IATVLTLVFTPSMLAARVWFVTYVQWAAQLMAKLSMGTSSRAARDWALSRQAARIKAP EVIWVEDDAAPVASRSPLQAAE" gene complement(1177766..1178107) /locus_tag="SKA53_05945" CDS complement(1177766..1178107) /locus_tag="SKA53_05945" /note="COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization operon protein PhnA" /db_xref="CDD:12177" /translation="MPDTLPPCPDCGARFTYAVDALLNCPACGHEWSPDAALDAADVI RDAVGNILQDGDTVTVIKDLKVKGSSTALKVGTKVTGIRLVSGDHDIDCKIAGFGQMG LKSQFVKKVMD" gene complement(1178207..1180033) /locus_tag="SKA53_05950" CDS complement(1178207..1180033) /locus_tag="SKA53_05950" /note="COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding/permease protein" /db_xref="CDD:14387" /translation="MRPTTHSDTNLGNTRVQGWSVIRRVMPYLWPQGQGWVKRRVIGA MLVLLLAKVIAVGTPILYKQAVDSLAPDGATAATVLGLGAVGLTLAYGFARLMNVGFQ QLRDVIFTRVGQRALRQLALETFTHIHRLSLRYHITRKTGGLSRVIERGVKGVDFLLR FLLFSMGPLMLELAMISVVLFYLFDVWYLAVVVGTIALYVWFTFTVTEWRVKIRKVMN DQDTDANQKAIDSLLNFETVKYFGAEKWEADRYDRAMAQYETAAVRTNYSLAFLNFGQ SVLITGGLVLVMVMAAIGVERGDLTVGDFVMVNAYMIQITMPLNFLGTVYREIRQALI DMGDMFDLLGQPAEVNDAPHAKPLAVTGGRVTLRDVTFGYDAGRGILKGINLDVAPGQ TVAIVGSSGSGKSTIGRLLFRFYDVTGGALLIDDQDVRDVTQDSLHAQIGVVPQDTVL FNDTVHYNIAYGRPDAGEDEIIAAAKAAKIHDFITSLPDGYQTTVGERGLKLSGGEKQ RVGIARTLLKNPPILLLDEATSALDTETEMEIQAELKAMGQGRTVITIAHRLSTIADA DLIVVLENGVIVEQGRHDALLVQDGRYAHLWNRQSEEEAPAV" gene complement(1180097..1181308) /locus_tag="SKA53_05955" CDS complement(1180097..1181308) /locus_tag="SKA53_05955" /note="COG1652 Uncharacterized protein containing LysM domain" /codon_start=1 /transl_table=11 /product="Possible peptidoglycan binding protein" /db_xref="CDD:25762" /translation="MDDQNKSQVGAWALGALAAAVLGALVLILLPAPSPTLPVLSVAA PEATAPMPAPEPEPEPEPEPEPEPEPEPEPAPEPVVAAPVVPAFDTFRLDPDGSIIVA GRAAPEQVVDLILGGVAIARATADATGSFVMLAGAGPADQPRRLSLLADPDGAAVPSQ TSYMVAPIAPVVVAEAAPEIAPETAPQIAPQTAAEAPIDPPTEEADLPETETAQIAPE TAPPPVVLETGADGVRVAQGAAVLPQPNVALDAITYDPAGAVELTGRATGDGEVQVYL DNESFAAAPVTAGGDWSIALPPVATGVYTLRIDEVDADGTVVSRMETPFQREEPASVA AVMAEDTARDGFEVAVRTVQPGSTLWAIAKESLGAGILYVQVFEANSDLIRDPDLIYP GQVFRIPDIAQ" gene 1181511..1181972 /locus_tag="SKA53_05960" CDS 1181511..1181972 /locus_tag="SKA53_05960" /note="COG1611 Predicted Rossmann fold nucleotide-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:8667" /translation="MLARNSWRLVYGAGDVGLMGRVAKAVQQAGGRTFGVIPTHLLAL EVGKRDLDSFVVTETMHERKKVMFMNADAVVVLPGGAGSLDEFFEVLTWRQLGLHRKP IVLLNTAGFWDPLLALMHHVVAQGFAGDDILAFVSVAADVSALEQALQDAL" gene complement(1181967..1182935) /locus_tag="SKA53_05965" CDS complement(1181967..1182935) /locus_tag="SKA53_05965" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="putative amino-acid dehydratase" /db_xref="CDD:10889" /translation="MGPELAAIKAAAECLRDVVIATPVLPLTSARWDGVLPDCAGVMV KLELFQQAGSFKARGAYLGIAGLDAGQRAAGVVAASGGNHALAVAWAARAAGVDALIC MPRATDPARIAGCEALGARVSLHDDMAAAFGAMNVAAAQGRALLHPFEARHMVLGAAV CALEYVTQAPDLDTFVVPVGGGGLISGMACAIRQLRPDAQVIGVEPYGADSMFQSLAQ GAPVTLDKIATIADSLGAPMALPYTFGVAQAHVDRIVRIDDAAMLRAMEIYQSILRIT AEPACAASLAAIIGPLRHDLAGRRVGIIACGSNISLARYATLMAAL" gene complement(1183010..1183609) /locus_tag="SKA53_05970" CDS complement(1183010..1183609) /locus_tag="SKA53_05970" /note="COG0605 Superoxide dismutase" /codon_start=1 /transl_table=11 /product="superoxide dismutase, Fe" /db_xref="CDD:10475" /translation="MSFTLPDLPYAHDALAAKGMSAETLEFHHDIHHNAYVTNGNKAI EGTQWAGKSLEEIIIGTYDAAAVAQNGIFNNISQLWNHNQFWEMMTPADSKMPGALEK ALVESFGSVDEFKTQFSAAGAGQFGSGWAWLVKKADGSLAITKTENGVNPLCFGQTAL LGCDVWEHSYYIDFRNKRPAYLTNFLDNLVNWENVAGRM" gene complement(1183756..1184319) /locus_tag="SKA53_05975" CDS complement(1183756..1184319) /locus_tag="SKA53_05975" /note="COG4583 Sarcosine oxidase gamma subunit" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, gamma subunit family" /db_xref="CDD:9827" /translation="MSDPISALQGRSTAGEVTIREAGLCGMITLRGELSNAKLRAVCK KITGQAFPEKAKIALGEDRGIAWMSPDEVLVMLPYAEVTDALAQIDSALAGQHYLAEN VSDARALIHVEGGFAREILAKLTPADLHPATFGTGDFRRSHLGQVAAAFWMVDADTFA VVCFRSVADYVHDLLVASAKAGPVGVF" gene complement(1184312..1187320) /locus_tag="SKA53_05980" CDS complement(1184312..1187320) /locus_tag="SKA53_05980" /note="COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, alpha subunit family" /db_xref="CDD:10278" /translation="MSTRLAGHGRLIDRTKPVSFTFNGKNLRGFAGDTLASALLANDQ MLVGRSFKYHRPRGVVAAGAEEPNGLVNLGQGAAFEPNQRITTTELFDGLTATSQNHW PSLEFDVGAINTHLSRFLPAGFYYKMFMFPRAFWKHVYEPFIRQSAGLGRAPKDRDQD TYEHFNLHVDVLVVGGGIAGLAAALAAGQAGARVLLIEQTADWGGRAVVDGAQIDGMD AVDWIKSTLQALDKMSNVTIRARCMGAGVYDHGYTLAYERLTDHAPDQDGPRHRLWRI RAAQIVTATGAIERPLSFVGNDLPGVMLAGAVRDYAVNFGVSIGDRTVVVTNNDDAYR TAIALKEAGLEVPVIVDARTAPAGPLIDQARALGIRIADGKGIAKVKGGKRVTGVTLC AQAGEGAVLEEIACDCVAMSGGWSPVVHLWSHCGGKLVWDDAQAMFRPDTARPPTGAD GAGFVIAAGVANGHLRSADVLADGIAAGKAAAHDAGHKKRITAAPVATDADEGRMAPV WMMPQGASYALRSKTWLDFQNDVKVTDVQLAAQEGFESVEHAKRYTTLGMATDQGKLS NINGLAVLSNALNMAIPNVGTTTFRPPYTPISMAAIAGAARDGVFQPLRKTPMSDWHT ANGADNEPVGQWRRPFAYVRTGESVHDAVNREVTNARSNVGLLDASTLGKLIVKGPDA GKFLDMLYTNMMSNLGVGKCRYGLMCSENGFLIDDGVVARMSEDTWLCHTTTGGADRI HAWMEDWLQCEWWDWKVYVANVTEQWAQVAVVGPKAKLLLDKLGGTDLSALPFMQWQA GQIGGFDARVFRISFSGELSYEIAVPAGQGRAFWDALVDAGAEFGIMPYGTEALHIMR AEKGFIMIGDETDGTVIPQDLNLHWALSKKKDDYLGKRAHARSFMDNPDRWRLVGLET LDGSVLPDGAYAIADGSNANGQRNTQGRVTSTYHSPTLGRGIAMGLVHRGPDRMGEVI TFNTVDDAKTVQARIVDPVFYDKEGAKQNV" gene complement(1187317..1187706) /locus_tag="SKA53_05985" CDS complement(1187317..1187706) /locus_tag="SKA53_05985" /note="COG4311 Sarcosine oxidase delta subunit" /codon_start=1 /transl_table=11 /product="putative sarcosine oxidase delta subunit protein" /db_xref="CDD:9826" /translation="MKASPQGSRIDDEFQTKGAPMLTLHCPYCGTDADETDLHAGGQA HLKRYGPGSSDDQFEDYMFMRENPKGVHFERWRHVYGCGKWFLAARCTATLEVFGTYP AQTTEPPPDLRAKISAKRPGWTWGDFA" gene complement(1187675..1188919) /locus_tag="SKA53_05990" CDS complement(1187675..1188919) /locus_tag="SKA53_05990" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, beta subunit family" /db_xref="CDD:10534" /translation="MKRYSAFAIAKEAFRQHTGWTRAWANPAPRAKYDVIIVGAGGHG LATAYYLGKNFGITNVAILEKGWLGGGNTGRNTTIIRSNYLQDPSAAIYEKSRSLYET MSQDLNYNVMFSPRGVIMLAQTQHEIRGYKRTAHANALQGVKTEWIGPEKVKELCPIM NIDGPRYPVLGGLWQARGGTARHDAVAWGYARACSDMGMHVIQQCEVTAIRRDGGRVV GVDTTKGAIDCDKLGLVVAGHSGVMAQMAGFRLPIESVALQALVSEPIKPCMDVVVMA NTVHGYMSQSDKGEMVIGGGTDGYNNYTQRGSFHHIEETVRALIETFPMIARLKMLRQ WGGIVDVTGDRSPILSKTPVDGVFVNCGWGTGGFKAIPGSGWAMAELMAKGASPLTDE FSMFRFREGKFIDESVAAGVAH" gene 1189109..1190305 /locus_tag="SKA53_05995" CDS 1189109..1190305 /locus_tag="SKA53_05995" /note="COG4235 Cytochrome c biogenesis factor" /codon_start=1 /transl_table=11 /product="cytochrome c-type biogenesis protein CycH" /db_xref="CDD:13484" /translation="MIFWILVGLMTLAVAGLMAIPLLRAPDVQGENPDITIYRAQLAE IDRDLERSLLDPAEADRSRTEIAHRLLAASRRQTAPLHHHKRQGLTAVTVLAVIAAVT FATYTQLGAPGYGDVPLQARLAASDAMRANRPAQVFLEQVAPPPPPVNVPDDYRAAID QLRDIAPTRPDDLEAWSRLVFHEVELRNYSGAAVAQERVVAIIGDDAQPADFVRLLDL LVVAAGGLVSPEAEQVIRDILARDESNAAARYYLGLLYDQTDRPDLAYRLWRDLAENG DLASFHVASARQLIEDAAFRAGVDYTLPEVRGPSADDIATAQDMTPEDRQAMIGGMVA GLADRLANDGGTAADWARLITAYGVLGETDSARAIWVEAADVFGANAEAMATLTQAAR NAGVAE" gene 1190302..1190778 /locus_tag="SKA53_06000" CDS 1190302..1190778 /locus_tag="SKA53_06000" /note="COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:22646" /translation="MICATPEDFAAQLPRHGAVAGLDLGTVTIGVAVSDLMRSVATPL ETIKRRKFTLDAARLFEITTHRMIAGLVLGLPRNMDGSEGPRCQATRAFARNLEKLTP LPITFWDERLSTVAAERAMLEADMSRKRRAERIDNIAASYILQGMLDRLRHLEARA" gene 1190775..1191017 /locus_tag="SKA53_06005" CDS 1190775..1191017 /locus_tag="SKA53_06005" /note="COG3313 Predicted Fe-S protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12647" /translation="MTIPEPTDHIWKRAEIDSPCIKICVIQPATRLCTGCLRTIDEIS TWSRMTQEARAAVMADLPARKGLVAKRRGGRAGRVT" gene complement(1191209..1192279) /locus_tag="SKA53_06010" CDS complement(1191209..1192279) /locus_tag="SKA53_06010" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="iron ABC transporter, ATP-binding protein, putative" /db_xref="CDD:13158" /translation="MTLPRLAARHLVKTFAGRRVVDDVSLTVMPGQVTCLLGPSGCGK STTLRIIAGVDMQDSGTIHVDGQLICDTVDRVPPEGRSIGLMFQDFALFPHLTVAQNV GFGLRGKRDDGRVTDLLQKVGMLRYLHDYPHQLSGGEQQRVALARALAPKPRIMLMDE PFSGLDDRLRDDIRDETLEILKSEGTAVLLVTHEPNEALRMADEIALMRDGRIVQRGS PYNIYNAPKDLEAAGFFSDINVIKGKVQGALTDTPFGQFLAPGVPDGTEVDIVIRPQH LKIDFDRAGRGPNPTPQDGTPARGVVQRARFIGASSLVEFRMDFDGSILRAAVPSVFL PKVGTPLWIMIRRDRCFVFPRG" gene complement(1192350..1193129) /locus_tag="SKA53_06015" CDS complement(1192350..1193129) /locus_tag="SKA53_06015" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="oxidoreductase, short chain dehydrogenase/reductase family" /db_xref="CDD:25396" /translation="MDLGISGKTALVCASSKGLGRGCAEALAAAGVNLVLNARGADAL EATAAEIRARFGVQVTTVAADVATEEGRARLLDAAGSVDILVTNAGGPPPGLWSDWDR DDFIKALDANMLAPIALMKALLPGMIAKGWGRVVNITSGSVKAPIAQLGLSNAARAGL TGYVAGTARQVAQHGVTINNMLPGIHATDRAISLDTGVATAQGIDMATAKAQREATIP ARRYGTAEEFGATCAFLCSQHAGFILGQNIVLDGGAINATI" gene 1193227..1194183 /locus_tag="SKA53_06020" CDS 1193227..1194183 /locus_tag="SKA53_06020" /note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:16520" /translation="MANTLITIEVFRAEDVCVIDGVLTGEMLGFADALVLDDIYALAA TSAPLSLDLVTGQTGLRRKTGARNAVHLDCCLTLMAADGTTHDALVLVEESAGLAIAI YLMALGDIVPDQSYRLVGVARETATRRFADAAAGSFARGTRITMADGQMRGVETLVPG DLVLTRDAGKQPLRHVTQATMRATGRFAPVVITQGTLHNDADLVLRPDHRIFVYQRSD LLGAGHAEVLIRARQLVDDVTVLRRRGGYVDYFQLVFDDHHIIYAEGIAAESHLVDAT TRHAMPADVPLHRHRPHLEYQVRDSLIDPATAAALLRRASTS" gene complement(1194172..>1194790) /locus_tag="SKA53_06025" CDS complement(1194172..>1194790) /locus_tag="SKA53_06025" /codon_start=2 /transl_table=11 /product="hypothetical protein" /translation="NTGQSGMVRFVCLGVCIVFGLAACSGGGGGDVGAGNGAPADGFA ALRDRVTTAGITPFATLPTMGEVAYAGRVRLSLPLGGAAVARYDGDLDLRVHFGAAPD PVTGRIGNLQGGAGPVTGHLQISDGRFYPDAAAARDYQFTAELSGTLMQNAAAHDVTA EMSGDFHGPQGAGVAGVIARGAVRQSDDLQLFDGSFAAERANSGG" gene complement(<1195202..1195458) /locus_tag="SKA53_06032" CDS complement(<1195202..1195458) /locus_tag="SKA53_06032" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGFLARRLAICVILSGCGGGGGGGGDSPGSGIDPRLARLDIYAA QRVRVLGDPGAGVMGVAPTTGALPVDGSAQFSGFATLRVEGR" gene 1195561..1197156 /locus_tag="SKA53_06037" CDS 1195561..1197156 /locus_tag="SKA53_06037" /note="COG4108 Peptide chain release factor RF-3" /codon_start=1 /transl_table=11 /product="peptide chain release factor 3" /db_xref="CDD:13390" /translation="MTNRPALPPEIARRRTFAIISHPDAGKTTLTEKFLLYGGAIQMA GQVRAKGEARRTRSDFMQMEKDRGISVSASAMSFDFGKYRFNLVDTPGHSDFSEDTYR TLTAVDAAVMVIDGAKGVESQTRKLFEVCRLRDLPILTFCNKMDRESRDTFDIIDEIQ ENLAIDVTPASWPIGVGRDFIGCYDILRDRLELMDRADRNKVADSIQINGLDDPKLAQ HVPADLLAKFRDEIEMAKALLPKLDPASVLNGSMTPIWFGSAMNSFGVKELMDGLATY GPEPQIQSAQPRNVAPEEIPVTGFVFKVQANMDPKHRDRVAFVRLASGHFERGMKLTH VRSKKQMAITNPVLFLAADRELAEEAWAGDIIGIPNHGQLRIGDTLTEGEAIRVTGIP SFAPELLQTCRAGDPMKAKHLEKALMQFAEEGAAKVFKPTFGSGFIVGVVGALQFEVL ASRIELEYGLPVRFESSQFTSARWVAGDKIAVDAFVAANKQHIATDNDGDTVFLTRLQ WDIDRVGRDYPAITLTATKEMMV" gene 1197394..1198431 /locus_tag="SKA53_06042" CDS 1197394..1198431 /locus_tag="SKA53_06042" /note="COG0793 Periplasmic protease" /codon_start=1 /transl_table=11 /product="glycosyl transferase, group 2 family protein" /db_xref="CDD:25805" /translation="MRFAQMGCDGVNTYTSATLITCLRDEGPFLIEWLAYHRAIGFDR FIIGANDCTDGSHDMLLRLAEMGEVIYLPFSRDPAGKGPQHQFADLLAATDHIKNGEW LAWLDMDEFLLVHRGDGTVQTLIRDLRKADGIRINWRYFGVPAGVKWPGRQIHPDLCR CAPADLALDGRLGHQTFKSLYRHRDGLAFYWHGPIYSAASLERQPDWRDGNGKAQRRR AWPRKRVKIQADLELVATSFVRHGWAQINHYATRHPAFAHMRRQRGRGSAYVPTDPTM PHYQDFAARHSDAYFATYNQHSHHDPRILRHLPACDAQMERLLADRALRHWHEHALRH LPTEALAKPVA" gene 1198549..1200045 /locus_tag="SKA53_06047" CDS 1198549..1200045 /locus_tag="SKA53_06047" /note="COG0513 Superfamily II DNA and RNA helicases" /codon_start=1 /transl_table=11 /product="ATP-dependent RNA helicase RhlE" /db_xref="CDD:10384" /translation="MTKFSDMNLDPKVLKAVAETGYDTPTPIQDGAIPPALEGRDVLG IAQTGTGKTAAFTLPMITLLGRGRARARMPRSLVLAPTRELAAQVAENFDTYAKYTKL TKALLIGGTSFKDQDKLIDKGVDVLIATPGRLLDHLERGKLILTDVKIMVVDEADRML DMGFIPDIEEIFKRTPFTRQTLFFSATMAPEIERITNTFLSNPAKVEVARAATTNVNI KQGVVMFRASAKLREATEKRALLRALINAEGDACSNAIIFCNRKADVDVVAKSLNKYG YDAAPIHGDLEQSHRTRTLESFRDNKLRFLVASDVAARGLDIPAVTHVFNFDVPSHAE DYVHRIGRTGRAGRSGVAIMICSGRDEKNLEDVERLVQNPIPRLDNPLGVTAPVAEEA TEEAPKRSRSRSRRGAATDTPAAPAPVEAAAVDAPIATPVAAPVEKPAEPQQQRAPRP PRDEPAKPRDDQPRARYQDRRDNGPRIIGLGDDTPSFIAKSFEERAKG" gene complement(1200146..1201825) /locus_tag="SKA53_06052" CDS complement(1200146..1201825) /locus_tag="SKA53_06052" /note="COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family protein" /db_xref="CDD:10465" /translation="MSNAKTANRLIYLPLGGAGEIGMNAYVYGYGPAGKERLIVVDLG ITFPDMDSTPGVDIILPDISWLTARRHQIDGIFITHAHEDHVGAVGHCWQQLGAPVYA RPFTANIARRKLEEHGQSPNVVKVVDPYPHVITCGPFKVSYLPISHSIPESAGLLIDT PDGRLVHTGDFKIDENPVVGDPWNAALWEEVAQPGVKALICDSTNVFSENAGRSESTL APAITEMMRHATGMVVATTFASNVARLQTLATAAKAAGRSIVLLGRAMRAMVDAATKE GLLTDFPAVISVEDALSVPRQNLMLLVTGSQGERRAASAQLAQGSYLGMKLKEGDTFL FSSKTIPGNERGVIKIMNQLSELGVDVVDDAGGKYHVSGHANRPDLVRMHKIIKAQVL IPMHGEHRHLREHAKLAEASGMTGIVAVNGMMIDLSGNRPKVAEYIETGRTYLDGSVQ VGALDGVVRDRIRMALNGHMIVTLIIDEDGDMLGDPWVEIMGLPETGRNDVPLVDVVE EDLAQFIGRAHAKTLADDDKLEKEIKMIARKSAQGEIGKKPEVTVIISRLA" gene complement(1201822..1202595) /locus_tag="SKA53_06057" CDS complement(1201822..1202595) /locus_tag="SKA53_06057" /note="COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor" /codon_start=1 /transl_table=11 /product="transcriptional activator, Baf family" /db_xref="CDD:11235" /translation="MLLAIDCGNTNTVFAIWDGDQFLATWRTSTEWQRTADQYYVWLT TLMRLQNVDVTIDAVIISSTVPRVVFNLRVLADRYFNCRPLVVGKPDCALPVAPRVDI GTQVGPDRLVNTAGAFDRHGGNLIVVDFGTATTFDVVEKDGAYVGGVIAPGVNLSLEA LHNAAAALPHVDITKPQSVVGTNTVACMQSGVFWGYIGLVREICARIKAERGSDMLVI ATGGLAALFQQTETLFDVFEDDLTMHGLTVIYRHNKEIA" gene complement(1202609..1203394) /locus_tag="SKA53_06062" CDS complement(1202609..1203394) /locus_tag="SKA53_06062" /note="COG0340 Biotin-(acetyl-CoA carboxylase) ligase" /codon_start=1 /transl_table=11 /product="biotin--acetyl-CoA-carboxylase ligase" /db_xref="CDD:10214" /translation="MPLLRRQRLSTDPSGHGHWPDAYGRIMLDNVDSTMAEAARRAGD IDRPTWIIAQTQTAARGRRGRVWQAPAGNLNATLIFKPDATPAEAARRSFLAANALFA ALSIYVPAEKLSLKWPNDVLLSGGKVAGILLESSGQGGNVDWLSIGVGVNLRHAPQDL ADAAFAPVSLTQMGGWEVEPVDFLTTLADAYATQEARLAQMGFARIRQDWLAHAARLG EVITARTMREEIIGTFDTIDDDGNLVLTTGAGPRVISAADVYF" gene complement(1203360..1204805) /locus_tag="SKA53_06067" CDS complement(1203360..1204805) /locus_tag="SKA53_06067" /EC_number="1.6.5.3" /note="COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit N" /db_xref="CDD:10736" /translation="MIGADIQILMPEVVLSVYAMVALLGAVYTTKDGAASLLTWMTAG LFVLVAIAIGMNGQGTHIAFGGMFVDDGFARFAKITILISAAAVLLISEGYMLRRGLL RFEYPVLITLAVVGMMVMVSAGDLMALYMGLELQSLAMYVIASLRRDSAKSTEAGLKY FVLGALSSGLLLYGASLTYGFAGTTLFTGIIAAAEGGASLGLLFGMAFLIAGFAFKVS AAPFHMWTPDVYEGAPTPITAFMATAPKVAAIALFARVVHDAFGGIIGDWQQIVAFLA LVSMFLGAIAAIGQGNIKRLMAYSSISHMGFALMGLAAGTVGGVQAMLVYMVIYVTMN IGTFALILSMEKDGRPVTDIAALKSHAKRQPLMALVMLVMMFSLAGVPPMLGFFGKYA VLLAAYEGGLAWLAVSGVIASVISAFYYLRIVYYMYFGEDTQALDGRVPPMLWVTAVV TAGIVGLAWIPGVNLFGLDPIAAAAAATLVN" gene complement(1204817..1206358) /locus_tag="SKA53_06072" CDS complement(1204817..1206358) /locus_tag="SKA53_06072" /EC_number="1.6.5.3" /note="COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit M" /db_xref="CDD:10737" /translation="MGNILTLTTFLPVLGAVILALGLRGDDAAAQRNAKWVALVTTIV TFICSLFILTNFDPANTDFQMVETADWIMGLQYKMGVDGISILFVMLTTFLMPLVIAS CWNVTTRVKEYMIAFLILETLMLGVFLALDLVLFYLFFEAGLIPMFLIIGIWGGKDRI YASFKFFLYTFLGSVLMLVAMVSMFSQAGTTDIPTLMGFAFGTEDFSILGVQIVGGMQ TLLWLAFFASFAVKMPMWPVHTWLPDAHVQAPTAGSVVLAAILLKMGGYGFLRFSLPM FPVGSEVMAPLVLWLSAIAIVYTSLVALVQADMKKLIAYSSVAHMGFVTMGIFTFNQQ GLDGAIFQMISHGFISGALFLCVGVIYDRMHTREIDAYGGLVNRMPAYALVFLFFTMA NVGLPGTSGFVGEFLTLVGVFQVNTWVALVATSGVIFSAGYALWLYRRVVLGDLIKES LRSITDMTRRERLIFAPLVVMTLLLGVYPALVLDMIGPSVAALIDNYDAALAAFDAAS QVAAN" gene complement(1206358..1208475) /locus_tag="SKA53_06077" CDS complement(1206358..1208475) /locus_tag="SKA53_06077" /note="COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit L" /db_xref="CDD:10738" /translation="MESIILFAPLVGAILCGFGWKIIGETAAQWTATSLLFLAAFLSW VVFLTFDPSLHDNGRYSLSILRWIDSGTLTTDWAIRMDRLTAIMLVVITTVSALVHLY SFGYMAHDENFKEHESYRPRFFAYLSFFTFAMLMLVTADNLLQLFFGWEGVGVASYLL IGFYYRKPSANAAAIKAFVVNRVGDFGFLLGIFGLYLLADSIQFDDIFAAVPAIADTT ITFLWRDWNAANLIAFLLFIGAMGKSAQLFLHTWLPDAMEGPTPVSALIHAATMVTAG VFLVCRMSPLMEYAPEAMSFVVFLGATTAFFAATVGLVQNDIKRVIAYSTCSQLGYMF VAAGLGVYSVAMFHLLTHAFFKAMLFLGAGSVIHAMHHEQDMRNYGGLRHKIPQTFWM MMIGTLAITGVGVPLLYVGFPIGFAGFVSKDAIIESAYAGTAGGYAFWMLVIAAAMTS FYSWRLMFLTFFGTPRGDKHTHDHAHDAPRSMLIPLYVLAIGAIFSGMVWYGGFFGSN DKVGKFFGVPYAAAEVAVEGDHGAAAEGAHEAEGEHAKPHYNLTGAPGEGAIHARDGN HVLNDAHEVPTWVRLAPFVAMLGGLALAYQMYIRRPELPAQLAKQQAPLYEFLLNKWY FDELYNFIFVRPALALGRILWKQGDTIMIDGGINGVAMGIIPFFTRLAGRAQSGYVFT YAFAMVLGITVLLTIVTLNGGWN" gene complement(1208480..1208785) /locus_tag="SKA53_06082" CDS complement(1208480..1208785) /locus_tag="SKA53_06082" /EC_number="1.6.5.3" /note="COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase kappa subunit" /db_xref="CDD:10582" /translation="MIGLEHYLTVAAALFIIGIFGLFLNRKNVIILLMSIELMLLAVN INLVAFSSFLGDLVGQVFTLFVLTVAAAEAAIGLAILVCFFRNRGTIDVEDVNVMKG" gene complement(1208871..1209476) /locus_tag="SKA53_06087" CDS complement(1208871..1209476) /locus_tag="SKA53_06087" /EC_number="1.6.5.3" /note="COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit J" /db_xref="CDD:10706" /translation="MSVFAFTFYLFAISTVTGGLFTVISRNPVHSVLWLILAFLSSAG LFVTLGAEFVAMLMIIVYVGAVAVLFLFVVMMLDVDFAGLKAEMTKYLPLALLIGVVI LMQLAMALGVWGFSEGVEGRIAAPVGELDNTRALGMLLYDQYFLLFQLSGLILLVAMI GAIVLTLRHRVDIKRQNVLNQMYRDPAKAMELRDVKPGQGL" gene complement(1209473..1209871) /locus_tag="SKA53_06092" CDS complement(1209473..1209871) /locus_tag="SKA53_06092" /note="COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit" /codon_start=1 /transl_table=11 /product="4-carboxymuconolactone decarboxylase, putative" /db_xref="CDD:25931" /translation="MSDQNPFESMMKMSQDWAKSMNFDMEAFTPKGFENLWPTMPKDA MEMFFGKGINPDGLDAKTRLLLTLAGLTVLGAQAEAQIRLTVRHLVEAGATKQEIAET IAQMGMFAGVPAMTKAMELANEVLQKDDDA" gene complement(1209868..1210368) /locus_tag="SKA53_06097" CDS complement(1209868..1210368) /locus_tag="SKA53_06097" /EC_number="1.6.5.3" /note="COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit I" /db_xref="CDD:10863" /translation="MSKTNMDYTRAAKYFLLQDFWAGFKLGMKYFFAPKATLNYPHEK GPLSPRFRGEHALRRYANGEERCIACKLCEAVCPAQAITIDAEPRDDGSRRTTRYDID MTKCIYCGFCQEACPVDAIVEGPNFEFSTETREELYYDKAKLLENGDRWESEIARNLA LDAPYR" gene complement(1210372..1211463) /locus_tag="SKA53_06102" CDS complement(1210372..1211463) /locus_tag="SKA53_06102" /EC_number="1.6.5.3" /note="COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit H" /db_xref="CDD:10734" /translation="MPRRAKPHRWLRNKDDTMVEFFTNTNLGIVLLILGQSLLVLIPL LLALAFLMYADRKVWAAVQMRRGPNIVGPFGLLQSFADFLKYIVKEIVVPAGADKFVF FLAPMITFVVAVISWAVIPFNDGWVLADINIAIFYILAISSLGVYGIIMGGWASNSKY PFLGSLRSAAQMISYEVSIGLIIIGVIISTGSMNLTDIVNAQRGNAGLFNWYLIAHFP MLFLFFISALAETNRPPFDLPEAESELVAGYQVEYSSTPFLLFMIGELMAVVLMCALV TLLFLGGWLSPIPGLPDGILWMVGKMMLVFFAFAMVKAITPRYRYDQLMRIGWKVFLP LSLGWVVLVAFLAKYEVLGGFWARWTIGG" gene complement(1211423..1213441) /locus_tag="SKA53_06107" CDS complement(1211423..1213441) /locus_tag="SKA53_06107" /EC_number="1.6.5.3" /note="COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase gamma subunit" /db_xref="CDD:10762" /translation="MSDLRKVIIDGTEVEVDGAMTLIQACEVAGIEIPRFCYHERLTI AGNCRMCLVEVVGGPPKPAASCAMQVKDLRPGPDGTPPVVKTNSPMVKKAREGVMEFL LINHPLDCPICDQGGECDLQDQAMAYGVDFSRYREPKRATEDLNLGPLVETHMTRCIS CTRCVRFTTEVAGISQMGQTGRGEDAEITSYLGETLDSNLQGNIIDLCPVGALVSKPY SFTARPWELTKTESIDVMDALGSNIRVDTKGREVMRFLPRNHDGVNEEWISDKTRFVW DGLRKQRLDTPYIREAGKLRKATWPEALAAAATAMKGKKIAGLVGDLAPTEAAFALKQ LIEGQGGHVECRTDGAKLPIGNRSAYVGTAAIEDIDTAQMIQLIGTDPRNEAPVLNAR IRKAWARGANVGLIGPQVDLTYDVAHVGTDRQALVDTAAKDMGAVKDMDSLVIIGMGA LREADGEAVLSQAMALADKTKSRFLVLHTAAGRVGAMDVGAVTDGGMDAALDGAEVVY NMGADEVEIKPGAFVIYQGSHGDRGAHRADIILPAAAYTEENGLFVNTEGRPQLALRA SFPPGKAKENWAILRALSAELGATLPYDSMAQLRQALVAAHPHLAALDEVAENDWQPL PVAKPGKADFVLAVTDFYLTNPIARASSLMAELSANAKARKTTPLAAE" gene complement(1213577..1213984) /locus_tag="SKA53_06112" CDS complement(1213577..1213984) /locus_tag="SKA53_06112" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTRTTIAIMVILLAMVSLAGTLSAQSQLRDEPAVRDGIIYVGMA YEIAEKCDSIRARTFRGLTYLQSLRATARDLGYSQAAIDAYIDDSAEKRRLEDIARAQ LAALGAATDDPASYCAVGQAQIAANTRVGWLLR" gene complement(1214028..1214150) /locus_tag="SKA53_06117" CDS complement(1214028..1214150) /locus_tag="SKA53_06117" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLLKKVVPWSGLFSCDDTRDGRKIPAVILLILNNAPSVAI" gene complement(1214171..1214581) /locus_tag="SKA53_06122" CDS complement(1214171..1214581) /locus_tag="SKA53_06122" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTKRGGAICAALVLAGCTTGSGPTRELTDSAVQRLVMMPTPAYY ATLTIASQVAQNCARYRYDAELDSAMNERRNELGRGSLSAIAQRDGIELETDVSQRSF TAKHGVALQGADLCPAADAEVLQGSLISVMLVPV" gene complement(1214578..1215864) /locus_tag="SKA53_06127" CDS complement(1214578..1215864) /locus_tag="SKA53_06127" /note="COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit" /codon_start=1 /transl_table=11 /product="NADH-quinone oxidoreductase, F subunit" /db_xref="CDD:11603" /translation="MLKDQDRIFTNLYGMHDRTLKGAQARGHWDGTADIIKKGRDWIV NEMKASGLRGRGGAGFPTGLKWSFMPKESDGRPAYLVVNADESEPGTCKDREIMRHDP HTLVEGCLIASFAMNAHACYIYIRGEYIREKEALQAAIDEAYAAGLVGKNACKSGWDF EIYLTHGAGAYICGEETALLESLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVV PTILRRGGAWFSGFGRPNNAGTKLFAISGHVNNPCVVEEEMSIPFEELIEKHCGGIRG GWDNLKAVIPGGSSVPCVRGENMRDAIMDFDALKEKGSSLGTAAVIVMDNSTDMIKAI WRLSKFYKHESCGQCTPCREGTGWMMRVMARLVEGNASVDEIDMLLDVTKQVEGHTIC ALGDAAAWPIQGLIKNFRDEIEDRIKHKRIAGLAAE" gene complement(1215864..1216094) /locus_tag="SKA53_06132" CDS complement(1215864..1216094) /locus_tag="SKA53_06132" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MARHGDTDQAKAGQRVALTVAAVGGLWVLVTMIGSQYGWSNRTR AIFDLAALAGFGFALWKTFQLWRMRRNDKGEN" gene complement(1216103..1216672) /locus_tag="SKA53_06137" CDS complement(1216103..1216672) /locus_tag="SKA53_06137" /note="COG0468 RecA/RadA recombinase" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase 41 kD complex I subunit" /db_xref="CDD:13063" /translation="MNNTAPIWMGIAAIAGLVFVVALGVAYVLYDLGLVGAVFVAIIV AGVAGLALALGWRPARNDGVAAPEAAAPAAAPAPAAAPAPAAAPAPAAAPAPAAPAAS AATSGAGTKPVMLSAARGGQPDDLRQLSGVGPKLEQTLHGMGIFHFDQIASWGPEELA WMDANLQGFKGRASRDGWVAQAKTLAASA" gene 1216378..1216548 /locus_tag="SKA53_06142" CDS 1216378..1216548 /locus_tag="SKA53_06142" /EC_number="3.6.3.14" /codon_start=1 /transl_table=11 /product="ATP synthase subunit E" /translation="MRQARVQLLVQVQLLVQVQLLVQVLLPVQPPRGPQRHHCAPDAS PMQAPDPRHRPR" gene complement(1216844..1217773) /locus_tag="SKA53_06147" CDS complement(1216844..1217773) /locus_tag="SKA53_06147" /note="COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit" /codon_start=1 /transl_table=11 /product="NADH:ubiquinone oxidoreductase 41 kD complex I subunit" /db_xref="CDD:1802" /translation="MLRRLYHDQPATFAFTDANLAWAEAQMKKFPEGRQASAIIPILW RAQEQEGWLTRPAIEYVAKMLDMAYMRALEVASFYFMFQLQPVGSVAHIQVCGTLSCM ICGAEDLIGVCKDKIAPKAHSLSADGKFSWEEVECLGSCANAPMAQIGKDYYEDLTAA RLTEIIDELAAGRVPTPGPQNGRFAAEPKGGLTTLKDFTSGKAQYNASAQAAVDIGDT VKRIDGTEVPLLTPWITDAPKPKAPVARKPRKDPKPSADVPADDSGVTQQEAQASSKA KPVSKSNPEQAGAAEKAVTKKPRAKPAPKQPKT" gene complement(1217773..1217895) /locus_tag="SKA53_06152" CDS complement(1217773..1217895) /locus_tag="SKA53_06152" /EC_number="1.6.5.3" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase delta subunit" /translation="MSIGLPASVLVLMGGTNLGGSVSAALFAPITGAVMMTGMN" gene complement(1217895..1218239) /locus_tag="SKA53_06157" CDS complement(1217895..1218239) /locus_tag="SKA53_06157" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKDDTMIRQLPFIAFIALSACAYPMVMPAPYPSARVAPQTLPTP VNPGSSKDRFIAAVTANGCELTSANTQTVLASATLSQQDMARIMTELRAEGRGEIGSD GRSFRITTGACL" gene complement(1218269..1218466) /locus_tag="SKA53_06162" CDS complement(1218269..1218466) /locus_tag="SKA53_06162" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTMEQVVLGAAVAVGFFLSAAVSRWFRRPVAGIIFGGVAGIALS VAVLSYGLTEVAGRDGVVLAE" gene complement(1218463..1219701) /locus_tag="SKA53_06167" CDS complement(1218463..1219701) /locus_tag="SKA53_06167" /note="COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase I, D subunit" /db_xref="CDD:10519" /translation="MMDGDIRVNTYDDGSVDALTGEQKIRNFNINFGPQHPAAHGVLR LVLELDGEIVERCDPHIGLLHRGTEKLMESRTYLQNLPYFDRLDYVSPMNQEHAWCLA IEKLTGTVVPRRASLIRVLYSEIGRILNHLMNVTTQAMDVGALTPPLWGFEEREKLMV FYERACGARLHAAYFRPGGVHQDLPDALIEDIDAWAVTFPKVLDDIDSLLTENRIFKQ RNCDIGVVTEQDIHDWGFSGVMVRGSGLAWDLRRAQPYECYDEFEFQVPVGKNGDCYD RFLCRMEEMRQSTHIIRQACAKLRVEKGDVMARGKMTPPSRGEMKTSMEALIHHFKLY TEGFHVPAGEVYAAVEAPKGEFGVYLVADGTNKPYRAKLRAPGFLHLQAMDHIATGHQ LADVAAIIGTLDVVFGEIDR" gene complement(1219698..1220594) /locus_tag="SKA53_06172" CDS complement(1219698..1220594) /locus_tag="SKA53_06172" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25588" /translation="MTEPAVLYCVGATKAGTSWFYRLLHDHPDCALPAVKEAHYWDTF TTPERDKQLAAFDLRLNELRAAKVLAEAADRGWQIRNLDRRIGDMAALMDVVAGDRND DTAYLAWLTQGRGVARIYADMTPNYATLSDALLDRMVAAAPLTKVIYLIRDPLDRLWS HIRMQAHRQRQSHEIYEKKANNILYRMLNRGQETHILARGDYAGVISKLRRVVPADRL LVAFAETLLTADGLARVCAFLGIGPVDVPAQAVHDGRPVAMLEKLRTPAQKLLFEQYD WVARNVGPLPANWQNNCVRMTA" gene complement(1220591..1221202) /locus_tag="SKA53_06177" CDS complement(1220591..1221202) /locus_tag="SKA53_06177" /EC_number="1.6.5.3" /note="COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase subunit C" /db_xref="CDD:16698" /translation="MTEALQELGAHLDLKRIDCVQSWDVTHGELTVTVAPSSLVSFVE FLKTDANCLFTSLVDITAVDYPSRAKRFDMIYHFLSMYQNQRIRVRVQIRDDDMMPSI IGVHPSANWFEREVFDMFGILFTGHPDLRRILTDYGFRGHPLRKDFPTTGYTEVRYDE VQKRVVYEPVSLVQEYRQFDFMSPWEGAKYVLPGDDKAKAEGK" gene complement(1221214..1221735) /locus_tag="SKA53_06182" CDS complement(1221214..1221735) /locus_tag="SKA53_06182" /EC_number="1.6.5.3" /note="COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase beta subunit" /db_xref="CDD:10251" /translation="MTGTAVGADKEHGAQLLNAELQDKGFLVTSTADVINWARTGSLH WMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVY DQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQ LQRKMRRTGTITR" gene complement(1221735..1222100) /locus_tag="SKA53_06187" CDS complement(1221735..1222100) /locus_tag="SKA53_06187" /EC_number="1.6.5.3" /note="COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A)" /codon_start=1 /transl_table=11 /product="NADH dehydrogenase alpha subunit" /db_xref="CDD:10705" /translation="MPDIVSNYLPIMIFLGLAIALGLLLIIAAAVIAVRNPDPEKVSA YECGFNAFDDARMKFDVRFYLVSILFIIFDLEVAFLFPWAVAFGDISMTAFWSMMIFL GVLTIGFAYEWKKGALEWE" gene complement(1222286..1223065) /locus_tag="SKA53_06192" CDS complement(1222286..1223065) /locus_tag="SKA53_06192" /EC_number="4.2.1.17" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /db_xref="CDD:10752" /translation="MIDLVVDGRGVATLTLARADKHNALSQAMIDALTQAAARIAADR RIRVVVLAAAGPTFCAGGDLGWMRDQMAADRAARRAAATSLAQMLGALNSLPQPLIGR IQGNAFGGGVGLACVCDVAIGVQTAKFGLTETRLGLIPATIGPYVLARIGAAKARRVF MSGRVFGADEAVALDVLARAVPADALDDAIAAEVAPYLSCGPEAVAAAKAYARSLGPV IDEAIIARSVDALLACWDGAEAAEGIAAFFGKRVPNWPGSA" gene complement(1223062..1223919) /locus_tag="SKA53_06197" CDS complement(1223062..1223919) /locus_tag="SKA53_06197" /EC_number="4.1.3.4" /note="COG0119 Isopropylmalate/homocitrate/citramalate synthases" /codon_start=1 /transl_table=11 /product="hydroxymethylglutaryl-CoA lyase" /db_xref="CDD:9994" /translation="MTFVRLHEVGPRDGLQTEKRIIPVAEKVALIDLLGRSGLRDIEI GSFVSPKWVPQMADTPQVMAGIAPVAGVRYAVLVPNLRGWDGFIAARVPGVVYEVAVF VAASEGFSRSNLNCSVAESVERLVPVVAAAQAAGVGLRGYISCVTDCPFDGPVAPDAV AKVAAMVRALAPMPVSLGDTIGKATPETVAAMLDAVLEIAPADQLAGHFHDTGGQALA NIETALGKGLRAFDSAVGGLGGCPYAPGAPGNVATEKVLALLHGAGFQTGIDTDVIAE AAALARRMR" gene complement(1224021..1225931) /locus_tag="SKA53_06202" CDS complement(1224021..1225931) /locus_tag="SKA53_06202" /note="COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit" /codon_start=1 /transl_table=11 /product="Methylcrotonyl-CoA carboxylase alpha chain" /db_xref="CDD:13908" /translation="MFTKILIANRGEIACRIIRTARAMGVRTVAVYSDADAGALHVQQ ADQAVRLGPAPAADSYLRGDLIVQAALDTGAQAIHPGYGFLSENPDFVEQVTQAGLVF IGPSAQAIRAMGLKDAAKALMVKAGVPVVPGYHGADQDGAFLAREAAKIGYPVLIKAV AGGGGKGMRLVDGPAQFAEHLASAQAEARNAFGNPAVLIEKYITTPRHIEVQVFGDGT DAVHLFERDCSLQRRHQKVIEEAPAPGMTVALRDAMGQAAVTAAKAIGYAGAGTVEFI VDGAGGLRPDGFWFMEMNTRLQVEHPVTEAITGVDLVAWQLRVAAGEPLPMRQDQLGI NGHAFEARLYAEDVPAGFLPATGRLDHLVFPSDARIDSGVVAGSEIAPWYDPMIAKVT VQGPDRATALRKLQAALDATEVAGSVTNLDFLRLLARDADFVAGVVDTGLIARGQGRL CAAPVPDAQMIAIAAVVAAYIAAGPLVGFTLWQPLVRRIVLGQGDVVHEVSLQVLGPD QITADVAGAQVSLRRHGADWGARALRHGVRQVSVFGAQTVTFSIVDPLARGSDIAGGD VVLAPMPGLVREVAVQEGDHVVQGARLIVLEAMKMEHVLRAPRDGVVASMCAEPGDQV AAGDLMVALAPI" gene complement(1225931..1227493) /locus_tag="SKA53_06207" CDS complement(1225931..1227493) /locus_tag="SKA53_06207" /note="COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)" /codon_start=1 /transl_table=11 /product="Methylcrotonyl-CoA carboxylase beta chain" /db_xref="CDD:13933" /translation="MSDRALHEAALAQVRDAAAAAALGGGQIARDRHLARGKMLPRDR VAGLLDPGSPFLEVGATAAHGLYNGAAPCAGVIAGVGLVGGVQVMVVCNDATVKGGTY YPMTVKKHLRAQEIAQACRLPCVYLVDSGGANLPNQDEVFPDRDHFGRIFYNQAQMSA LGIPQIAVVMGSCTAGGAYVPAMADVSIIVKGQGTIFLAGPPLVKAATGEVVTAEALG GGDVHTRLSGVADYLAEDDAHALALARQAVASCAMRNTCNVNRLASEPPALDPASLFD AIPADLRTPYDIREVIRRIVDGSRFDEFKARFGETLVTGFAHIDGWPCGIVANNGVLF SESAQKGAHFVELCSQRRIPLVFLQNITGFMVGQKYENEGIARHGAKMVTAVATTKVP KITMVVGGSFGAGNYGMSGRAYGPHFMWSWPTSRISVMGGEQAAGVLATVKRDAIERA GGAWSAQDEAAFKQPTIDMFTEQSHPLYASARLWDDGIIDPRKSREVLALSLAAACNA PIEETRFGVFRM" gene complement(1227490..1227783) /locus_tag="SKA53_06212" CDS complement(1227490..1227783) /locus_tag="SKA53_06212" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTRWMFFIPVAGLVVVAGIIGYRMGQVPSETEIITRYAASYVAM AGNGAALTDCAATIHPDPAIRLVINCANPNGLTTTFYAGPRGEALPPPQGPAI" gene complement(1227818..1228966) /locus_tag="SKA53_06217" CDS complement(1227818..1228966) /locus_tag="SKA53_06217" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="isovaleryl-CoA dehydrogenase" /db_xref="CDD:27631" /translation="MSFDLGEDVNALRGMVHDWAQTRVKPMAAQIDRDNLFPAALWRE MGDLGLLGVTVDESYGGAGMTYLAHTVAIEEIARASASVSLSYGAHSNLCVNQIKLNG TEAQKAKYLPRLISGDHVGALAMSEAGAGSDVVSMALRAEKRNDHYRLNGNKYWITNG PDADTLVVYAKTDPDAGSKGITAFLIEKEMTGFSTSPHFDKLGMRGSNTAELIFDDVA VPFENVLGAEGRGVAVLMSGLDYERVVLAGIGLGIMAACLDEIMPYLASRKQFGQPIG NFQLMQGKIADMYTAMNSARAYVYAVAAACDRGTVTRQDAAACCLYASEEAMKQAHQA VQAMGGAGFLADAPVARLFRDAKLMEIGAGTSEIRRMLVGRELMGAMG" gene complement(1229072..1229734) /locus_tag="SKA53_06222" CDS complement(1229072..1229734) /locus_tag="SKA53_06222" /note="COG0546 Predicted phosphatases" /codon_start=1 /transl_table=11 /product="phosphoglycolate phosphatase" /db_xref="CDD:10417" /translation="MRSVIFDLDGTLADTSGDLIAAANACFRDLGLGDMLDPATDAAT ALCGGRAMLRLGFSRLQGIDEAEVDRQYPLLLAAYAQAIDIHTVLYPGAMEAVMALKS SGYAVGIATNKPAALAETLMRSLGVRDHFASLIGADTLKVRKPDPAHHIEAVLRAGGD PAQSLLVGDTITDRDTARNAGVPSVLVTFGPGRDSVLALEADATIDDFADLPAVVARL IG" gene 1229841..1231199 /locus_tag="SKA53_06227" CDS 1229841..1231199 /locus_tag="SKA53_06227" /note="COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine pyrophosphorylase" /db_xref="CDD:10925" /translation="MNGAKMANAVIILGAGLGTRMNSDLPKVLHPIAGAPMLVHAMQA AMVLDPARRVVVAGYEAAQVEKAALAHDPDVTVVVQAEQLGTGHAVAQAQAALADFVG DALVLYGDTPFIRPDTLEAMMEARQTHDIVVLGFEAEDPARYGRLILKDGQLDRIVEY KDATEAERAVTLCNSGVIAADAATLFDLVAAIGNDNAAGEYYLTDIIDIARARGLTAT VVECAEAETLGINSRFELAQAEALFQNGARMTALDDGVTLIAPETVYFAYDTVIGRDA VIEPNVVFGPGVTVESGATIRAFSHLEGCHVSRGAIVGPYARLRPGAELAENTRVGNF VEVKNAVIAEGAKVNHLSYIGDADIGPRSNIGAGTITCNYDGVSKHHTTIGADVFIGS NTMLVAPVSVGDQGMTASGSVITRDVPAGDLAVARARQDNKAGFAVRLFDKLRAQKAK GQ" gene 1231202..1233022 /locus_tag="SKA53_06232" CDS 1231202..1233022 /locus_tag="SKA53_06232" /EC_number="2.6.1.16" /note="COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains" /codon_start=1 /transl_table=11 /product="D-fructose-6-phosphate amidotransferase" /db_xref="CDD:10323" /translation="MCGIVGVLGNHEAAPLLVEALKRLEYRGYDSAGIATINGMTLDR RRAVGKLVNLSDLLVHDPLAGKAGIGHTRWATHGVPNAGNAHPHRSGGVAVVHNGIIE NFRELRADLAALGIAHETDTDTETVALLANHYITEGLSPRDAAQATIARLHGAYALCF LFEGHDDLLIAARKGSPLAIGHGNGEMFVGSDAIALAPMTDRITYLDEGDWAIITRNS LEIRDAAGNLANRDLRQIHIDAAQVDKGGYKHFMAKEIAEQPQVLQGALNHYINADAT GMAMPEGLDFTAVNRLTMVACGTAFYACMVAKYWFEQVAGLPVEVDVASEFRYREPPV TDGTMAIFVSQSGETADTLAALRYMAGKAMQIVSVVNVPESSIARESDIALPILAGVE IGVASTKAFTCQLTTLAALVLHAARQRGRIDDAALAGKLAALRALPGLMNTALGIEDR TVALSRDLAEARDILFLGRGAMYPLALEGALKLKEISYIHAEAYASGELKHGPIALVD PHVPVIVMAPRDALFEKTVSNMQEVMARGGKVLLITDSQGAAEAGDGVWQVLLMPAVD PFLAPILYALPAQLLAYHTAIAKGTDVDQPRNLAKSVTVE" gene 1233019..1233741 /locus_tag="SKA53_06237" CDS 1233019..1233741 /locus_tag="SKA53_06237" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMDEHSTTDALADHAGMTLDDALAALGSDPAKAAEMARHHKVDR AYLGVTPPAIEAVAKGWREALDLEARLALAAALWASDVHEGQIAAAKLLTQARIRPDD SAAWDMITAWVPACDGAAIADQVAIAGQKRLVADPARFDVLADWVASDHLWTKAAVLG FTLPWTKQTHPKPADLALRDRALDWAGTLAGDPHKVIQTALVSWLASLAKHDPASASG FVDRHGAAMKSYALKSARHRLG" gene complement(1233742..1233867) /locus_tag="SKA53_06242" CDS complement(1233742..1233867) /locus_tag="SKA53_06242" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein A" /translation="MINAELRPSGGVAGSGSQISLAAMRLIAAPLTGLVALTLLR" gene complement(1233874..1234173) /locus_tag="SKA53_06247" CDS complement(1233874..1234173) /locus_tag="SKA53_06247" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKCILILSLMILAACAMPVADTPATAEIATNLPAAAPRSARNVD DFDTTTAAARQAATQVVAGGTAIGTTIATLGAPADPGIWVKTPLVTQVTQGRIRY" gene 1234259..1235263 /locus_tag="SKA53_06252" CDS 1234259..1235263 /locus_tag="SKA53_06252" /note="COG2896 Molybdenum cofactor biosynthesis enzyme" /codon_start=1 /transl_table=11 /product="molybdenum cofactor biosynthesis protein A" /db_xref="CDD:12246" /translation="MMTPLIDPFARAISYLRVSVTDRCDFRCVYCMSENMTFLPKKDL LTLEELDRLCSAFVRLGVKKLRITGGEPLVRRDILTFFKAMGRHLDSGALEELTLTTN GSQLEKYAADLYAAGVRRINVSLDTLDEAKFAQITRWGKLPQVLRGIDAAQAAGLRVK INTVALKGFNEEELFTLTDWCAARDMDLTFIEVMPMGDIGNEDRIDQYWSLNDLRARL AARGTLTDLPDRTGGPARYLRVDATGQKIGLITPLSHNFCESCNRVRITCTGEIYTCL GQEGHSDLRAPLRGSEADQDLENAIRAAIALKPKGHDFDYSRQKVDGQVSRHMSHTGG " gene complement(1235270..1235881) /locus_tag="SKA53_06257" CDS complement(1235270..1235881) /locus_tag="SKA53_06257" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="SAM-dependent methyltransferase" /db_xref="CDD:8779" /translation="MWEDRYSASDDYLFGTAPAAVLADNPWLALQGQSVLCVADGEGR NAVHLAVLGMQVTAFDLAPTAVARAQALADRSAVAVQTHVAGWDDWDWAQPFDMIAAI FIQFAEPDLRARQFADMARALRPGGRLVLHGYRPEQVGRGTGGPPFVENMYTEDMLRA AFAGWHVERCASYEKVQQAGSGHVGPAALIDFIARKPEASPPV" gene complement(1235881..1237110) /locus_tag="SKA53_06262" CDS complement(1235881..1237110) /locus_tag="SKA53_06262" /note="COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase" /codon_start=1 /transl_table=11 /product="amidohydrolase family protein" /db_xref="CDD:11187" /translation="MADRADPPHARVRRPDKILEKMMPVKNRFAELLPEITAWRRDLH ENPEILFDTHRTSALVADKLREFGCDEVVTGIGRTGVVGVIKGKTDTAGKVIGLRADM DALPIHEATGLPYASKTPGAMHACGHDGHTAMLLGAAKYLSETRNFDGQVVVIFQPAE EGGGGGREMCADGMMDRWNISEVYGMHNWPGRPVGSFSIRPGAFFAATDQFEIVIEGK GGHAAKPQETVDSTLVAAHVITALQSIASRNADPVDQVVVSVTAIESSSKAFNVIAQR VHMKGTVRTMSKDMRDLAEARLKAISTGTAGAFGAVAEVSYHRGYPCMVNHVDQTAFA ADVARSVAGDCTDAPLIMGGEDFAFMLEERPGAYILVGNGDGASVHHPEYNFNDDAIP TGCSWWAGIVEQRMPAA" gene 1237267..1237515 /locus_tag="SKA53_06267" CDS 1237267..1237515 /locus_tag="SKA53_06267" /note="COG3313 Predicted Fe-S protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKTPSPCISVCKFRREGHCIGCSMTKAQKSMFKALKKPAHQSA FVTMLMAQQAVMGKFSHWRRAYEKKCAKKGASFPPQAG" gene complement(1237516..1237986) /locus_tag="SKA53_06272" CDS complement(1237516..1237986) /locus_tag="SKA53_06272" /note="COG0783 DNA-binding ferritin-like protein (oxidative damage protectant)" /codon_start=1 /transl_table=11 /product="possible DNA-binding stress protein" /db_xref="CDD:10651" /translation="MTQTATDLSPTAQAAIADALNQCVAETTVTTMLAQNFHWNVTGM AFGSLHALFQTIYEDHFTGQDDLAERIKALDGHAEGTLAGMIKRSKVAEYAGHADDRT MIKTLQQAEETLAATLAAAGELAAEHGDALTEDLCIARGQTHEKFAWMLRAHLA" gene complement(1238032..1238388) /locus_tag="SKA53_06277" CDS complement(1238032..1238388) /locus_tag="SKA53_06277" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSASPALIHTPAAPTPDGPHALRVAGRKARLSGVTTGDAMQDLL SALPKALGRRLRFHEPKAAEKSFDEIWLENLFDAVRQGDEARYRFALLSRMSREKASA LHFLVCKAAHLTQPGG" gene complement(1238522..1239955) /locus_tag="SKA53_06282" CDS complement(1238522..1239955) /locus_tag="SKA53_06282" /note="COG1282 NAD/NADP transhydrogenase beta subunit" /codon_start=1 /transl_table=11 /product="NAD(P)+ transhydrogenase, beta subunit" /db_xref="CDD:8222" /translation="MEYGFTTAAYVVAAILFILSLGGLSGQESAKRAVWYGMAGMALA ICATLVGPGAGFWLLSLVLIGLGGIIGYQLATKVQMTQMPELVAAMHSLVGLAAVLVG FIAHFELGRVAGMDAIARASLDGFAALLAYKSPVEINILRVELFLGVFIGAITFTGSV IAYGKLAGKVNTAAAKLPGGHVLNATAAAISVLCLIWYFSTGGFVPLMVMTLAALFIG YHLIMGIGGADMPVVVSMLNSYSGWAAAAIGFSLGNDLLIVVGALVGSSGAILSYIMC KAMNRSFVSVILGGFGGPAGEQMAVEGEQIAIDSDGVAAALNEADSIIIIPGYGMAVA QAQSTVAELTRKLRAKGKNVRFAIHPVAGRLPGHMNVLLAEAKVPYDIVMEMDEINDD FPTTDVAIVIGSNDIVNPAAQDDPNSPIAGMPVLECWKAKQVFVSKRGQGTGYSGIEN PLFYKENTRMFYGDAKKSLDELLPKID" gene complement(1239970..1241544) /gene="pntA" /locus_tag="SKA53_06287" CDS complement(1239970..1241544) /gene="pntA" /locus_tag="SKA53_06287" /EC_number="1.6.1.2" /note="COG3288 NAD/NADP transhydrogenase alpha subunit" /codon_start=1 /transl_table=11 /product="NAD(P) transhydrogenase subunit alpha" /db_xref="CDD:12623" /translation="MKIGTPKEIFAGEDRVAMTPASAQDLKKLGYDCVIETGAGVAAG FTDQSYKDAGVEVVKTAAALYKAADIIAKVRPPEDVEVKRLREGQTLISFFYPAQNKD LMEAANAKGATVIAMDMVPRISRAQKMDALSSMANIAGYRAVIEAGNNFGRFFTGQIT AAGKVPPAKVLVVGAGVAGLAAIGTATSLGAITYAFDVRPEVAEQVESMGAQFVFLDF KEEQQDGAKTGGYASVSSPEFAAAQLAKFREIAPDMDIVITTALIPGRDAPELWTPDM VAAMKPGSVIIDLAAERGGNCKLTVKDEKIVTDNGVIIIGYTDYPSRMAAQASTLYST NIRHMMTDLTPAKDGVPVHNMEDDVIRGATATHQGAITFPPPPPKINAIAQVAKKNQP KELTAEEKRAKETADFKAQTRNQVTLLTVGAVLLLGVGLVAPASFMQHFIVFVLAVFV GFQVIWGVAHSLHTPLMAVTNAISSIIILGALTQIGSGSWLVVVLAALAVFMTGINIF GGFLVTRRMLAMFQKS" gene complement(1241650..1242099) /locus_tag="SKA53_06292" CDS complement(1241650..1242099) /locus_tag="SKA53_06292" /note="COG2020 Putative protein-S-isoprenylcysteine methyltransferase" /codon_start=1 /transl_table=11 /product="isoprenylcysteine carboxyl methyltransferase family protein" /db_xref="CDD:11728" /translation="MKWIDIPPVWLLLAVATTWQISVLQPQVLAIGHPMLDLLGGLLV GAGLVLMLLAVAEMRRRKTTVIPHKEADALVTTGVFARSRNPIYLGDALVLAGLALRW DAPVALMLVPLFMATLIQRFILPEENRLRRKFHADFARYCEKTRRWL" gene 1242178..1242939 /locus_tag="SKA53_06297" CDS 1242178..1242939 /locus_tag="SKA53_06297" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="D-beta-hydroxybutyrate dehydrogenase" /db_xref="CDD:25396" /translation="MMEHAGKHALVTGGGTGIGKGIALALAEAGAEVTITGRNADRLS QLAASHPRLHVLVMDVDNESSVRDGIAGAATARGPVQICVANAGIAEGGPFAQTSLAA WRKTMTTNLDGVFLTFQAALASLPPDMAARMIVVSSIAGVRGLKNAVPYTVTKHGVIG LIRGLSEEYMRSPVTFNALCPGYVDTAIVRNQLPGLMKRFDLDEAGAVDLIAKGNRHR RLLEVDETTAAAMWLCSDGARSVNGQTIQISGGQV" gene 1242936..1244144 /locus_tag="SKA53_06302" CDS 1242936..1244144 /locus_tag="SKA53_06302" /note="COG3844 Kynureninase" /codon_start=1 /transl_table=11 /product="kynureninase" /db_xref="CDD:13160" /translation="MITSFIRDFSQTKALFQMPADMIYLDGNSLGPLPRAAAARINDC VTREWGEMVITGWNRAGWMAQPTTYADRIGRLIGAETGHCVLGDTLSVKVYQALAAAL DLVPDRRVILTDSGNFPSDIYMAEGLIKSLDRGYELRVVAPQDVADHIDSDLAVLMLT QVDYRTGRMHDMAALTQKAHDAGAITIWDLAHSAGALPVDVAGCGADFAVGCTYKYLN GGPGAPAFIYVAPRHIDRCEPALSGWLGHAAPFAFEAGYRPGTGIERMRVGTPPVLQL AALDASLDIWDRVDLHDIRKASIALTDQFIAGIEAACPMLTLASPRDPAQRGSQVSFR FADGYAAMQACIAHGVVGDFRAPDIMRFGFTPLFIDAGDVARAVEIIAKVMTDKLWDR AEFRQKAAVT" gene complement(1244234..1244539) /locus_tag="SKA53_06307" CDS complement(1244234..1244539) /locus_tag="SKA53_06307" /note="COG1295 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="putative ribonuclease protein" /db_xref="CDD:11011" /translation="MALGVLLAALGLLYRFGPVRIESRGRWVTLGALVVIVLWIAASA GLSFYLTNFASYNEVYGSIGAVIGMMLWLYVSAYLILLGAALNMHVHGKQAQAQEAA" gene 1244611..1244754 /locus_tag="SKA53_06312" CDS 1244611..1244754 /locus_tag="SKA53_06312" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAFSPLINAPTAARQDHSATRIDTTLAQPSVCDGALTNPFTCVC NSR" gene 1244800..1245042 /locus_tag="SKA53_06317" CDS 1244800..1245042 /locus_tag="SKA53_06317" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTTGSAISPKIAMIAASPGKIPNIPKNATPAAISPRCFSLAVCS TALPVCQIALNAAMTHLPSEYYTLAVVCAGQPVTLP" gene complement(1245080..1246048) /locus_tag="SKA53_06322" CDS complement(1245080..1246048) /locus_tag="SKA53_06322" /note="COG0392 Predicted integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10266" /translation="MSERPDPDTGLRHKLFGAVLRICVTFAILGLLWHLTDGPQVLAL VVQTEWPWLLAALVSAHGQVLLSALRWRLTAAQLDQSLRKRDAIGEYYLSQFVNLAVP GGVLGDAGRALRQRHQAGMLRAAQAVVLERLVGQVALFVVLFCGFIAAIAVPGGLVLP GWVSDIVGWLALGLAGVVVLGAVLARVPGPVAHATAGFGAALRLGLLARGVWPRQVGL SIAIVACNLSSFAFCAIATGTDLPLVAVVTVLPLILTVMMIPLSVGGWGLREGAAAAI WPVVGAAPEAGIAASIAFGLVILVASLPGVWFLLSQRRHPAAANRS" gene 1246308..1247315 /locus_tag="SKA53_06327" CDS 1246308..1247315 /locus_tag="SKA53_06327" /note="COG1404 Subtilisin-like serine proteases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPTARRNEIVTMTATSLFSATGRVIGAISSLGLLSACLGGGAGG NTVQPTDNVSANTNLVSSGVYYSWMHPDIQTAWDQGYVGQGTHVITIDDFITDVTSVG RLTDVSADMRHGEWIDMQVGLMAPDATRVQQDFTATASVQLDAGALNIVNLSFGMFAA NGLADSQIDWTARESSVITYAQNGAAVVVKAAGNHAVAIGSVNSSGEVDYLDRALIGA DAAIFVGALNGNGTVANPTSLTTFSNYAGTNLTVQNQFIAVGVRDDLTSLNGTSFAAP IVSGYAAVLGSKFTTATPTQITNQLLNTARTDTILNYSTAMHGRGEASIARALAPASI N" gene complement(1247340..1247939) /locus_tag="SKA53_06332" CDS complement(1247340..1247939) /locus_tag="SKA53_06332" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPDIHRLRHMHRWFGRVGLAIGSTFQAQAAGAQDVWSQTSVLDV RTGSVRSGIALDLSAGRYALEDGTMVELSDWYRPRFLDLNILFLTEIQPSFGAIWGFS TGETGQKYTIDPGLWVGFVYRADLDDNQALTVSATTLLGGALQEQSCVAFYTILNDFA QVNCRLAASPLPPEETLPFLVSERGAIETTFSLRYEIRF" gene complement(1247973..1248110) /locus_tag="SKA53_06337" CDS complement(1247973..1248110) /locus_tag="SKA53_06337" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDVAPLHDMCRIENMWCSDLPEAAGGTALCIVFPGDVVASFLHV P" gene complement(1248188..1248925) /locus_tag="SKA53_06342" CDS complement(1248188..1248925) /locus_tag="SKA53_06342" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPLPYLLDTSVSFPRKDCAMSAVFTRRQALVSGLGLAASGVLLA PGRAVANTVAFDAAWDHLTFRRLTPNRFTLHGTAVDVVADSSSSILYRVLPEALRGAT RATWVWEVENSVPPSDLSQIGNDDRNLGMFFVSMPAQAAARVGPNTSIRRMMLNSAAQ VLMYTWGGGQPAGAVVPSPHAPDRLRNLITRPAQAGRFSEDVDLTRDFPRVFGQDLQQ LVAVAISSNSENSGTRVVARVSDLQVF" gene 1249055..1249804 /locus_tag="SKA53_06347" CDS 1249055..1249804 /locus_tag="SKA53_06347" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /db_xref="CDD:10174" /translation="MFDTHPIQDNDQPLQLPPQGRQTWLVTGASAGIGLAVCQILHAA GHDVTGFGRRQAQDLPAGFPDIAYHTADLATSQGCDLLAERAPRRLDRALLNAGLGHY RPLCRETPQAINDVLAVNLLAPIMAAHGLFGALQAGQGVLGLVGSVAYRGAAGMPVYA ASKAGLDGFGRSLRSEWQGRVDVRVIHPGPTATGMAMRAGLTSPLAQRMMLPVDAVAA GVIAAMQGQGRMRQRISFGALLRHKITGRAA" gene 1249801..1250529 /locus_tag="SKA53_06352" CDS 1249801..1250529 /locus_tag="SKA53_06352" /note="COG0300 Short-chain dehydrogenases of various substrate specificities" /codon_start=1 /transl_table=11 /product="short chain dehydrogenase" /db_xref="CDD:10174" /translation="MRALITGGSDGLGAAVVRQLTQAGAQIWIIDKSAPQTNPSLRFL PCDLAQPDDIASLPAKVQQAGPFDLVVMSAGINAVGPFEAMPLTTIRNLHAINCAAPI LLAQHLLAQDMIAAGGRLIFIASVSHFTGYPGASVYAGGKDALVAFARSLRRPLWADQ RITVQVATPGPMRTAHAARYAPPGSTGRGRACPDRIARAILRSKRRAVIVPGVAARMM ALFGRLFPVQATQAMRKTLYERLP" gene 1250526..1251593 /locus_tag="SKA53_06357" CDS 1250526..1251593 /locus_tag="SKA53_06357" /note="COG1252 NADH dehydrogenase, FAD-containing subunit" /codon_start=1 /transl_table=11 /product="FAD-dependent pyridine nucleotide-disulphide oxidoreductase" /db_xref="CDD:10969" /translation="MNRLILIGAGLVHLEVLRRLTKTQFPDTEITLISKDSQAVYAGM LPGVVAGHYAPEQMTVDAARLAAAAQVGFRQGAISGLDLAASKVILADGAALDFTHLS LNVGAWPRDIGQASAVQSLSIKPAPAFFDALQAWERQAAPAARVGVIGGGAAGAELVL ALAHRWRDSRPAPILIERSGLRLDRIAAAARRPLRRHLARAGIAVHTPDTAPDLALAI NAAGAAPPGWLAQTGLARNALGYLAIGPSLQVTGQDRIFASGDVASMADHPRAKAGVF AVRQGPVLFANLQRALAGEPLLAHRPQTDWLSLIGTGPKHAIATRNGIALQGRWVWRI KDINDRSYLARYRDIVEKDSP" gene 1251590..1252339 /locus_tag="SKA53_06362" CDS 1251590..1252339 /locus_tag="SKA53_06362" /note="COG0398 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10272" /translation="MTTPDPAPPRKNRLLRFAPVAAILAALGAMYAAGLQDIFNLDWL AAQRDTLRALIADHYALSLISFALIYVLAVATAFPAASMLTISGGFLFGWLVGGSVVV ISATCGASLLFLAARTSFGAGLRAIAGPRVNRLAEAFENNAFSTLIVLRLAPVFPFFA MNIAPALFRVPLSTYVPATLIGIAPGTFAFAYLGSGIDSVLASAEAAGQSVQIGDLVT PELTIAFGALALVAAIPPVIRKLYPKRTPKA" gene complement(1252342..1253328) /locus_tag="SKA53_06367" CDS complement(1252342..1253328) /locus_tag="SKA53_06367" /note="COG4608 ABC-type oligopeptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /db_xref="CDD:13764" /translation="MTKVLLDVRGLSRRFDVSQPWLNRKIEGTGKLYVNAVDDVSFTV KQGETFALVGESGSGKSTIARLIVGLLKPSGGDIVFDGTSLKDGLNGAKARALRRRFQ MIFQDPLASLNPRWRVVDIVAEPLRVFERAMSNRDQRLRVGELLTLVGLAPEDGVKFP HQFSGGQRQRIAIARALAANPDFIVCDEPTSALDVSVQAQILNLMKDLQKDFGLTYVF ISHNLQVVRHMANDIGVLYLGRLAEVAEAGALFDAPKHPYTRMLLDAVPDIEMTGRRR KQVEGEIPSPIDPPSGCAFHPRCPFANDRCKRDVPQVLGGVACHAVQEGRIS" gene complement(1253325..1254335) /locus_tag="SKA53_06372" CDS complement(1253325..1254335) /locus_tag="SKA53_06372" /note="COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /db_xref="CDD:10318" /translation="MTEPLLSVRNLTVEFPTRRGVLTAVQDISFDIMPGEVLGVVGES GAGKSMTGSAIMGLIDRPGRIAQGEVILQGRRIDNLPDAEMRKIRGRKIGMIFQDPLT SLNPLYRISEQLIETIRTHLPLSEAQARKKAIGLLDDVGIPDASRRIDDYPHQFSGGM RQRVVIALALCAGPDLVIADEPTTALDVSVQAQIIDVMKRLCAENGASIMLVTHDMGV IAETADRVAVMYAGRIAEIGPVRDVIKDAQHPYSSGLMGAIPRLGANLDRLTQIPGSM PRLSAIPRGCAFNPRCPHVMDKCHIDQPQAVQTAPGRRVACWLYPPQDGTGANTERQS AQ" gene complement(1254344..1255321) /locus_tag="SKA53_06377" CDS complement(1254344..1255321) /locus_tag="SKA53_06377" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="putative transport system permease protein" /db_xref="CDD:10891" /translation="MENRKLVKDIPAEDLIVPVRAQGRLARALDSDIFYSWRTSPVTV VATFVALSLILLAVFAPLIAPYNPFNPASLNLMDGFTPPASTGAFTDNYFLMGADNQG RDVLSTIMYGSRVSLFVGILATLFAMTLGVSLGLIAGYNGGTIDAVIMRVTDIQLSFP AILIALLIFGIARGLIPANQQESMAVWVLILAIGLSNWAQFARTVRGATMVERQKDYV SAARIMGVHPILILLRHVLPNVLGPVLVIGTISLALAIIEEATLSFLGVGVPPTQPSL GTLIRIGQQFLFSGEWWILFFPAVTLIALALSVNLLGDWLRDALNPKLR" gene complement(1255325..1256305) /locus_tag="SKA53_06382" CDS complement(1255325..1256305) /locus_tag="SKA53_06382" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="putative transport system permease protein" /db_xref="CDD:10471" /translation="MLAFIIRRLAQSVVVMLFVALIAFVVFRYVGDPIASMVGVDTRL EDQEIMRERLGLNDSVIVQFLRFIGNAMQGEFGISYRLQQPVTELILSRLPATIELAL VSATIALVFGVIFGVYTALRPKAWSSAGIMALSLVGVSLPTFLIGIGLIYIFAVELGW LPSFGRGDVVDLGWWRTGFLTESGLKSLILPAITLSLFQLTLIMRLVRAEMLEVLRTE YIRFAKARGLSQRAINFGHALKNTMVPVITITGLQLGSVIAFAIVTETVFQWPGVGSL FIVSVQVVDVPVMAAYLMFIALVFVLINLVVDILYYVVDPRLRVDGGAGK" gene complement(1256384..1257937) /locus_tag="SKA53_06387" CDS complement(1256384..1257937) /locus_tag="SKA53_06387" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative binding-protein-dependent transport protein (periplasmic)" /db_xref="CDD:10615" /translation="MLLSSTLIVSQASAETIRWARASDALTLDPHSQNQGVTHNFAHH VYETLMDRDAEGTLTPRLATSWAIKDGAPDTWVFTLREGVTFHDGAAFTAEDVVFSLD RARSEKSNMRQLHVDVAEVTAVDDYTVEVRMTGPSPLYPNNLTNTFMMDKDWSEANNV VEVQDYAAGEDNFAVRNTNGTGPYILQSREVDVRSVLTVNDNHWAETKPEVTEIIYLP ISDAATRVAALLSGEVDVVQDVPVQDIERLSGTDGIKVETGAENRVIYFGYKFGDAPL ASSNITDSNPFNHPAVREAMELAIDRDAIKAVVMRGQSFPTGIPNPPFVAGWTPELDA YPAVDLDRAKALLAEAGYPDGFSVTLDTPNNRYVNDEAISQAVVGMLGRIGINVTLAS RPVAQHSPLVTANETDFYMLGWGVPTFDSAYVFNDLVHSKEGSYGAYNGGLYSNPALD AMIKSLGTETDLEARAATVAEIWEVVKADRVLLPIHNQVLAYAMNDRITLPVHPENQP LMTSVTFAD" gene complement(1258174..1259010) /locus_tag="SKA53_06392" CDS complement(1258174..1259010) /locus_tag="SKA53_06392" /note="COG0810 Periplasmic protein TonB, links inner and outer membranes" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10677" /translation="MTRLRACGGAIAALALSGALHAAGLLIVAAPPQRIEVAGGGTPD IAAIGAAFADFVAGASPVSPAAQPAVAPAPAQRSLALPASAVADLAVPVTPDPSASAP VATGATPVTARETTPQPAPDTTSALPDTAPATSLRPIARPASQTAQPAAPPRPAGNAD TDAARGSTQAQAQGQAAAAGAAAAPDSTGGQAAAAAYPGQVLRQITRLRAQRAPARGS VLVRFAIAASGALADLSVAQSSGSAALDRLALDHIRRAAPFPAPPAGAQMAFSFEFLG RP" gene complement(1259007..1259393) /locus_tag="SKA53_06397" CDS complement(1259007..1259393) /locus_tag="SKA53_06397" /note="COG0848 Biopolymer transport protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10714" /translation="MRLAPSPRAKPEPTITLINVVFLMLVFFLIAGQVAQPLDRDVQL VDADSMAARVPDDALVMRADGTLIWHGLATTLTDFVAAQPDQTGALRILPDRYLPARD LIAVAAALRAQTGQDVRLVTRQGLAP" gene complement(1259398..1259766) /locus_tag="SKA53_06402" CDS complement(1259398..1259766) /locus_tag="SKA53_06402" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MARPALRKRRLSLTSLIDVIFLLLLFFMLSSTFTRFGDLPFIAA TGGATQAGTPPAFLRISADAITLNVAEVSLATLPDAIAALDGALVLVAPSEAVTAQRL VDVLVAAQTVPGIRLRLIGG" gene complement(1259759..1260382) /locus_tag="SKA53_06407" CDS complement(1259759..1260382) /locus_tag="SKA53_06407" /note="COG0811 Biopolymer transport proteins" /codon_start=1 /transl_table=11 /product="MotA/TolQ/ExbB proton channel family protein" /db_xref="CDD:17009" /translation="MIHLYQARDALAAFIDLGGWVVALIIALSVLSGAVVLWKLAQFY TAGVGRHAPLLAALAASDAGQQARALALAEAAPSHLAPVLALALQARDARDRLYTLAE ARLARLEAGFRLLDGVAQTAPLLGLFGTVLGMIAAFRAMQDAGQSVDPSVLAGGIWVA LMTTAAGLAVAMPLSAILSWLEGRMAHERRMAEALIEGALRPGLAHG" gene complement(1260379..1260786) /locus_tag="SKA53_06412" CDS complement(1260379..1260786) /locus_tag="SKA53_06412" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVRTSLFALVVAGSAAAQDTGGIAVDLNRLDPADNACRLTFVAQ NALAPLTALALETVLFDQAGRVAALTLFDFADLPQGSRRVRQFDVAGVACADVAQVLI NGVAACTGDSTTPATCAQALRVTGSVDDVEVLQ" gene complement(1260780..1262885) /locus_tag="SKA53_06417" CDS complement(1260780..1262885) /locus_tag="SKA53_06417" /note="COG1629 Outer membrane receptor proteins, mostly Fe transport" /codon_start=1 /transl_table=11 /product="putative Hemin receptor protein HmuR" /db_xref="CDD:28191" /translation="MTLRMRPRRLGLACLFTTTAILAAGMASAQQTQLDSSTFLGRLI FGAGQQKVAIDTPQAVSVLDQDDIDREQAANVGQILRNVPGVQTAGSDRPFGFAFNIR GIGATEQSASEARIIVNVDGVPKFYEQYRMGSFFSDPELYRRVEVLRGPGSATLYGSG AIGGVVSFETKDAGDFIPDGGTGALRLKYGYESNGNGQLGSVIYAARPAEGAEFLAAL GYRRSDDFETGAGAAVTGSGFEAPSALLKGTFQINDTQTLRLSAQRFSSDADNTTLAQ TGGGDAIANAFGNVDRSVTDDTFNVTWDHAGGGWFNPRVQLSYSDTTVDQSNARSTSG AAQACLPTASNANVFCDVTYAYSTTMLKAENTADFSGAGWNHFLTFGAQTTYQDRVAD SAGPLGFHPEGSDRKIGLYAQSEVVIGDRLTVIPGARIDFAEREPGSDVPNGATVTDE ATALTLAALYDVTDDLSVFGSVARTERLPTLDELYSTSGTKAAALDLDKEEATNIELG LTYNRDGLFAAADNLQLKLTAFRNRIDGYVTVTPTTDTVFFRNLARADFEGAEIEGGY EAESWFARLALSRVRGTDGNFGYTLSTTPADQAALTLGARLPGRGLEFGWRGTFVDDI TTSTRNVTSGVVTDTAFDGYTTQDVFVTWRPENGALDGFDVQLGVENLFDTDYRNNLS LDQGRGRSFKVSLARTLTW" gene 1263100..1264140 /locus_tag="SKA53_06422" CDS 1263100..1264140 /locus_tag="SKA53_06422" /note="COG3720 Putative heme degradation protein" /codon_start=1 /transl_table=11 /product="hemin degrading factor" /db_xref="CDD:13040" /translation="MILSPDRVAAIATARADKPKMRERDLANVLNIREAEILAAELGH GVRRIAADPDRLLARIPALGDVMALTRNDFCVHERRGQYLDYRADAHAGMVLGPDIDL RIFPSHWVHGFAVERSGPDGTRRSLQVFDAAGDAVHKIYLQPESDLAAYDALVADLAV ADDAPFDLAPRAVPEPIRVNEAKFDELRSAWPKMTDTHQFLAMTSRLKFDRLGAYLSI GAPWAVPLPVNAVEQALRQAGAQAVPIMVFVGNRGCIQIHSGPVARLEPMGPWFNVLD PYFNLHLRADKVAQVWLVRKPTKRGDAISVEAFDRDGHLILQIFGKRAEAATDTGAWD AIATGLAAEVMA" gene 1264137..1264997 /locus_tag="SKA53_06427" CDS 1264137..1264997 /locus_tag="SKA53_06427" /note="COG4558 ABC-type hemin transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative hemin binding periplasmic transmembrane protein" /db_xref="CDD:13725" /translation="MIRQIAAGLVVAVALAPTAFADTPSRVIAAGGSVAEIIHALGAG DRLIARDTTSTFPPALESLPDIGYVRALSSENLIAMAPDIVIAEHDAGPPEVLDVLQR SGIALVMAPQALDPDGVAAKIDAVATALNLPDAGAALQARVAAQLEQARIAGDALPRS PRVMFILSMQGGRLLVGGAGTSAEAMILLAGGTNAVTALDGYKPLTDEAAIAADPDLI LMMDRGGDHAVVLADIIAHPALRLTRAAIDQRIVSMDGLYLLGFGPRTGAAALELNTH LRRLTDEVKG" gene 1264997..1266064 /locus_tag="SKA53_06432" CDS 1264997..1266064 /locus_tag="SKA53_06432" /note="COG0609 ABC-type Fe3+-siderophore transport system, permease component" /codon_start=1 /transl_table=11 /product="permease protein of ABC transporter" /db_xref="CDD:10479" /translation="MVALADTPVLAGDRSIRARRVAFGLAGLLLLTSLLSLSHGASGV RLDLVLQSWLAGHDVPARDWLILWEIRLPRMLTGVLVGASLAVGGAVMQGLFRNPLAD PGLVGVGAGAGLGAVLAIVLGGQAPAWVAAWLGWNMVPVAAFMGGWLSTMVLYRVSTR AGRTSTATMLLAGIALGALAGAATGILVYVADDRQLRDLTFWGLGSLGGASWPKIAAA GPVMLLALLAAPFLARGLNGLSLGEAAAHHIGLPVQRVKHVAILTVAAATGAAVAVSG GIGFIGIVVPHLLRLATGPDHRYLLVNAALLGATLLLLADLIARSIIAPAELPIGIVT AVIGAPVFLWILLRRRGLVDL" gene 1266064..1266852 /locus_tag="SKA53_06437" CDS 1266064..1266852 /locus_tag="SKA53_06437" /note="COG4559 ABC-type hemin transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ATP-binding protein of ABC transporter" /db_xref="CDD:13726" /translation="MLTNRSLHASLGRTAVLHGITTSAAPGRIVAVIGPNGSGKTTLL RAISGDVAYDGRIALDGADLADLKPWELAARRGVLPQAATLAFPFTVAEVVRLGLTSG TQADRSDLIGRALAEVDLTGFSGRYYQELSGGQQARVQLARVRAQVWDPVVAGRPRWL FLDEPVAALDIAHQIGVMRVLRRFADAGGGVVIVLHDLNLAAMVADDVWLIHDGLLLD AGSPARVIGGSALAEAYGCPIVANRLPGPQATFVLPHGLWAAAG" gene complement(1266861..1267214) /locus_tag="SKA53_06442" CDS complement(1266861..1267214) /locus_tag="SKA53_06442" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGFWGFTPADAGAINRPTARNKGQIMPRTSALAVIALTLIAGCT GGNVFVSGAGPDDLLKLRAGPGLEFNVIMGLPDGTALTRQDCVTELGQRWCRVTLADA PGVTGYVSADYLTER" gene complement(1267219..1267851) /locus_tag="SKA53_06447" CDS complement(1267219..1267851) /locus_tag="SKA53_06447" /EC_number="2.7.7.6" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma-70 factor" /db_xref="CDD:26644" /translation="MNTDDLIAALAADTLPQPGIAQRLVWSLPVALAVCVAAFVAFWG VRPDLGAALASLAVLKMILPVLLAGLAGAVAIALAHPVEMAGRRWAVLAVFAAVLVAT FVFHLQRGGLSGLVEALSISSLWVCLTSVPALGLPFLAAILWSLSTGAVLRPRLAGAV AGLAAGGASAAIYAFYCDQDAALFVLPAYGTAILSVALAGAICGPRVLRW" gene complement(1267848..1268294) /locus_tag="SKA53_06452" CDS complement(1267848..1268294) /locus_tag="SKA53_06452" /note="COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /codon_start=1 /transl_table=11 /product="probable sigD protein" /db_xref="CDD:11308" /translation="MRRVVQARGGGLGQDSCEDVLQDVLLAIHTKRHTWRQDAPLRPW LYAIARHKVVDAFRARGRRIELAIDDFADALAAPQGPDPLDGRDMEKLLGALDPRAAD IVRGFGLRGETTADTAARLGMTEGAVRVALHRALRTLARLRERMIE" gene 1268573..1268884 /locus_tag="SKA53_06457" CDS 1268573..1268884 /locus_tag="SKA53_06457" /note="COG5572 Predicted integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14656" /translation="MTTKTLSLTLAASLASALTLSAGQMHAQEATMEKCFGISLAGAN DCAAGPGTTCAGTSTVDYQGNAWTLVATGTCADIALPAMADGSARMGSLAELDRDLPP A" gene 1268939..1269787 /locus_tag="SKA53_06462" CDS 1268939..1269787 /locus_tag="SKA53_06462" /note="COG3220 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26342" /translation="MPALPRTTGLGFKPQHFTDMMATDTIGFIEVHAENYMGDGGAPH AMLAALHECHALSIHGVGLSIGSAGGLDRDHLARLRRLIDRYQPESFSEHLAWSSHGA AWLNDLLPLPYTPETLATICAHVDQVQDTLGRRMLLENPATYVTFASSTLSETDFLTE LVQRTGCGLLLDVNNVFVSATNHRFDARAYLADFPLFAVGEIHLAGHDTEDLPSGPLL IDSHGAPVADPVWALYAEVLARTGPLPTLIEWDTDVPDFATLLAEAARANAILRDVQR PQTDAA" gene 1269756..1270523 /locus_tag="SKA53_06467" CDS 1269756..1270523 /locus_tag="SKA53_06467" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12557" /translation="MCKGRRPMQPDSHAAQQQAFEAALWQQDPPAGLSAPVMAEVAQR FAVYRNNVQHSLTRALAGRFAVVEQLVGPTFFTAMARVHIAQDPPQSPVLLGWGATFA DFLDGFAPVAHLPFLGDVARLEYARGLAYHAADAMPVAADALAVDDPATLRLGLHPSV QLFTSPHPALQIWQAHQTGGTRAPLRAGPDHALIARAPDFSIVTAPLDEDTYAVLRAL VAGDRLGDAATHAEPTTALVLLLRHGLITTIDTGVSP" gene 1270520..1270993 /locus_tag="SKA53_06472" CDS 1270520..1270993 /locus_tag="SKA53_06472" /note="COG2259 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTPTIDLRNRIGQINRLADHLPHDVVAFAARLFPAIVFWQSART KVDGFTIKDSTYFLFEQVYALPVIPPATAAQLATLAEHLLPVLLVLGLFARFSALGLL VMTAVIQTFVFPEAWVTHGLWATALLVVLAQGPGRVSLDHLMGLDHGGARHKRRP" gene 1271138..1271740 /locus_tag="SKA53_06477" CDS 1271138..1271740 /locus_tag="SKA53_06477" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11934" /translation="MTSYLHEDRLQAVLAAISASGARRVLDLGCGDGDLFVRLATMPA LDDLVGIDICAASLDRLRARLARITVTAGKVDVRHGSMTDPARDLAGYDCAVLLETIE HIDPDQLSRLERALFTVLRASTTIITTPNAEFNPLLGVPAHRMRHPDHRFEWDRARFR TWCARAAKTAGYAAAFHDIAGTHPTLGGASQMAVFTLPAG" gene complement(1271737..1272582) /locus_tag="SKA53_06482" CDS complement(1271737..1272582) /locus_tag="SKA53_06482" /note="COG0702 Predicted nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10571" /translation="MTIAITGATGQLGRLAIAHLKTLTDPAQIIALVRDPAKAADLGV AARAFDYTAPQAMAPALQGVDVLVLISSSDFNDRVGQHRNVIAAAKAAGVGRIVYTSI QQADRSPMLIAFDHRATEAAINDAGLTATILRNGWYTENWTSSLAGAISAGAMIGAAG DARFTPATRADYAQALAVVAADDAHAGQVYELGGDTAITLADIAAEVSRQTGKDIPYN DLPADVYQGILESFGLPAGFAAVLVDVDQQAGEGWLADNSGTLRQLLGRPTTPLAEAV RAALA" gene 1272663..1273025 /locus_tag="SKA53_06487" CDS 1272663..1273025 /locus_tag="SKA53_06487" /note="COG1733 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11444" /translation="MKKMAHDLTPDVLNDRCPSRAVLNHVTSRWGVLILIALQDGTLR FSALRRRIGGVSERMLAQSLRLLEDDGFVRRTAHPVVPPHVDYDLTPLGYEVAAKVHA LASLIEGNLGQIIAQRKT" gene complement(1273039..1274199) /locus_tag="SKA53_06492" CDS complement(1273039..1274199) /locus_tag="SKA53_06492" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="putative membrane protein" /translation="MIARLSASKRGLTIAALGTSQTVGWASSYYIPAVLAVPMADSFG LSPVWVFGAFSMALVVSAIVGPWAGARIDGFGGRGVLMLSNIVFALGLCLLAAAPVPA VLYLGWAVVGFGMGIGLYEAGFATLAGIYGKDARGPITGITLIAGFASTLGWPLSGIM LATWGWREACLGWALIHLLVALPLNAWLPSGNEALPKPATPEPVGPPPSRRALWLLAF VFAAAWFNATAMAAHLPGLLQAAGASTAVAIAAGALIGPAQVAARVLEFGLLQRFHPL VSTRLAAAAHPVAAVALIGFGGPAAYVFALLHGAGNGIMTIAKGTLPLSLFGPAGYGQ RLGWLNAPARVSQAAAPLIFGAALTGWGVNAVWLTAGIGMAALLALLILKRS" gene complement(1274196..1274492) /locus_tag="SKA53_06497" CDS complement(1274196..1274492) /locus_tag="SKA53_06497" /note="COG0640 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, ArsR family" /db_xref="CDD:373" /translation="MSDTNLHARALAALGHDARLSIFRLLVKAGHDGLRVGEIGDHLG IAPSTLAHHLSALVDAGLVVQDKQGREVFNRADFDAMHRLVGFLTSHCCTGVGP" gene 1274679..1275443 /locus_tag="SKA53_06502" CDS 1274679..1275443 /locus_tag="SKA53_06502" /note="COG0541 Signal recognition particle GTPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10795" /translation="MQGSESTRDINCAAKMLQETCRAAAPSALGLDKMHPKPTGKDLT IETRHVHELAEMLLQRDAPRVIIAVAGAPGSGKSTFAAELARRLSARGKRGVVVPMDG FHLDNAVLEARSLLPRKGAPETFDAQGFVRLIRAIKAQEDVFAPSFDRMRDLSVAGAI AVPADASYVIAEGNYLMFDESPWSELAGLWDVSIRLDVPMPELRARLIQRWLSQNLSR AVATRRAEGNDIPNAQRVIAKALPCDFTFDGQQARA" gene 1275465..1277093 /locus_tag="SKA53_06507" CDS 1275465..1277093 /locus_tag="SKA53_06507" /EC_number="5.4.2.2" /note="COG0033 Phosphoglucomutase" /codon_start=1 /transl_table=11 /product="phosphoglucomutase" /db_xref="CDD:9908" /translation="MQIRDIATAPIRGQAPGTSGLRRKTRAYMAPLFLENYVQAILDG TGGAAGKTYVLGGDGRYFNAAAIQIILRILAGNGAARVMVGQGGILSTPAASHLIRKT GADGGFILSASHNPGGIDADFGLKYNMGNGGPATETMTAAIVVASESITRIRMADSAD INLDALGAAAIGPMQVQIIDPVTDYLALMEDLFDLDAIAALIAGGFTLRFDAMHAVTG PYARALLVDRCGASPDSVMNAIPLPDFGGGHPDPNPVWAAELMGLMMSPDAPDFGAAS DGDGDRNMIVGRGCYVTPSDSLALIADRADLAKGYRRGLAGVARSMPTSGAVDRVAAA KGIACHETPTGWKFFGNLLDTGQITLCGEESAGTGSDHIREKDGLWAVLMWLNIIAVS GQSVADLMAAHWRSYGRNYYSRHDYEDVDSAVATLLMADLRGRLDRLPAQSFAGLRVT AADDFAYTDPVDGSVSTGQGLRLFFEGGARAVLRLSGTGTSGATLRVYLEQLVTDGDL HHDAGDVLAPLAAAVDAIAGISARTGRTAPDVKT" gene complement(1277138..1278448) /locus_tag="SKA53_06512" CDS complement(1277138..1278448) /locus_tag="SKA53_06512" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctM subunit, putative" /db_xref="CDD:11306" /translation="MSDLALGFLSFPVLLGLIFLRAPIGLAMLICGIGGLWLATDGTT VFMARLKSETYSTFSSYSLSIIPLFLLMGQFATHSGMSQALFRAAGAFLGHRKGGMAM AAVGACAGFGAICGSSLATAATMSKVALPELRRSGYAGGFATATLAAGGTLGILIPPS VILVIYAILTEQNIAKLFAAAIIPGLLAALGYMLTIAIYVRLYPDQAGTQDRLPMRDR LQALLPVWPVLLVFGLVVGGIYSGWFTPTEGAAVGAAGTGVIALAAGKLGWGALRDSL MQTATGTGMIFFIVLGAAFYNGFLALTQVPQELSTWVAGQGFSPMMIIVLILVFYLIL GCLMDSLSMILLTVPIFWPVISTLDFGMTPDELAIWFGILVLIVVEVGLITPPVGMNL FIINSMDRETKITATYRAVVFFVASDIIRVVILLMFPIITLILI" gene complement(1278445..1278975) /locus_tag="SKA53_06517" CDS complement(1278445..1278975) /locus_tag="SKA53_06517" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLHLLITRLAQGTALLGGSVLIGLVCLVCASIAGRELGALAIMA GFGDLVRGAGLGPVTGDYELVEAGMAFAVFSFLPLTQLTQSHARVDIFTAGLGARINA ALSAFWSVVMALVIVLITWRLFAGMQDKLRYGETTFMLQFPVWWGYAACLAAACVACI VSLYCAALRLSGKRAG" gene complement(1279008..1280036) /locus_tag="SKA53_06522" CDS complement(1279008..1280036) /locus_tag="SKA53_06522" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctP subunit" /db_xref="CDD:11350" /translation="MIITRTLFAGLVAFAIGTAASAQEVTLRLHQFLPAQANVPANIL DVWADRVEADSNGRIKIDRFPSMQLGGTPPQLIDQVIDGVADIVWTLPGYTPGRFPQL EVFELPFISPDAEVTSRAFWDLAEARMMDSDFAAFKPLGLWVHGPGIIHANRPVAAIT DLEGLKLRGPTRVITNLLTDLGATAVGMPVPAVPEALSRGVIDGAVIPWEVAPSIRVQ ELVTNHTEFDGAALYAATFILAMNTNSYNALPDDLKAVIDANSGLEFSAFAGRTQQAG DADARALAVAAGNSIITLTPDQTAPWREAAAATTAAWIAEADAAGIDGTGLYAAATAL IAKHAGKD" gene complement(1280169..1280468) /locus_tag="SKA53_06527" CDS complement(1280169..1280468) /locus_tag="SKA53_06527" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQRERAPFSDKTDMLRKQTLKAQSLCVLMSLAAICGKWVEGLSG TCRTARMPYWGRLPVAVGFSAACVCDAVAASGGDIWAWRMIRVNGAGRAPVLGEA" gene 1280530..1281630 /locus_tag="SKA53_06532" CDS 1280530..1281630 /locus_tag="SKA53_06532" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="polyamine ABC transporter, ATP-binding protein" /db_xref="CDD:13158" /translation="MQQVKNDEAFVAFERVQKSYDGETLVVKDLNLAIPKGEFLTLLG PSGSGKTTCLMMLAGFETATHGDIRLDGVSVNNIPPHKRGIGMVFQNYALFPHMTVGE NLSFPLEVRKMGKSEREAKVKRALDMVQMGDFAARRPAQMSGGQQQRVALARALVFEP ELVLMDEPLGALDKQLRETLQFEITNLAHQLGITVVYVTHDQTEALTMSDRVAVFNDG RIQQLATPDDLYERPQNSFVAQFIGENNTLTGVVQDISDKSCTVRLDSGDVIDAMPVN VGAVGDRTKVSIRPERVEIDKTRLQPGAHTLKAEVLEFIYMGDIFRTRLRVAGMDDFV IKTRNAPDQVRLTPGTKIDIGWLAQDCRALDA" gene 1281710..1282825 /locus_tag="SKA53_06537" CDS 1281710..1282825 /locus_tag="SKA53_06537" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="Spermidine/putrescine-binding periplasmic protein" /db_xref="CDD:10556" /translation="MKLTKAMMATTALTLAGTSAFAGGHMANDMTIVSWGGAYQASQD SAYLQPYLAANPDVRASWDESSPEAVAKLRAMDEAGNLTWDLVDVVAADAIRLCDEGL AMEIDHDALLAAAPDGTSASEDFGDLIVSDCFIPQIAYSTTNAYRTDVTAWNGATPGD ICALFDLETFPGTRTLQRVPLDNLEWALICDGVPFVDVYDTLETTEGQDRAFAKLDTI KDSTIWWTSAAESIQSLADGEAVMGSSYNGRFFSAIVEQDQPLAMLWDAQVYDLDGWI IPTGLPEDRLARVLDFVFFATDTQRLADQSKFISYGPARASSAPLVSTHATLGIEMAP HMPTDPANSSNAFVQNYMWWADYRDDLDARFQAWLAQ" gene 1282952..1284556 /locus_tag="SKA53_06542" CDS 1282952..1284556 /locus_tag="SKA53_06542" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="polyamine ABC transporter, permease protein" /db_xref="CDD:10894" /translation="MAEQMMAADGRTLKSSLNRALRRQKLRALLLITPLLLFILITFV VPIGQMLFRSVENQIVGDTIPRTVEALADWDAATDPVPDEDVFRAFAADMMVAVEERI HTRLGSRLNYETAGISSQFRRSGRDVEDMGEELTAQFTALDPAWQDPATWVALMADPD WIADSATAQTEPAFIISDAARDALPRTADIYADFARVTQVINTDSPTEEQPWNVVYIA LYQDLIANPAPQIAGAPDGLLGAAGAAVAGFVAPDMRAAFVDSDAGWGSTATWQTIQT YSPAYTSSYFLNSVDLKQTPDGIEIAPENQQIYVKLFIRTLIMSLTIMVSCILLGYPV AWMLANLPSRQANLMLILVLLPFWTSLLVRTSAWKVLLQQQGVINDLLVWVGLVGDES RLTMINNATGTIIAMTHILLPFMILPLYSVMKTIPPSYLRAAKSLGATNWTAFWRVYF PQSVPGIGAGSILVFILSIGYYITPEIVGGTSGIFISNRIAYHISSSLNWGLAAALGT ILLAVVLALYWAYDRIVGIDNVKLGG" gene 1284561..1285448 /locus_tag="SKA53_06547" CDS 1284561..1285448 /locus_tag="SKA53_06547" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=1 /transl_table=11 /product="ABC polyamine/opine transporter, inner membrane subunit" /db_xref="CDD:10895" /translation="MTSLPIYATTGQKIWHYTFRVIVGLILFFLIAPIIIIIPLSFNA ESFFTFTPEMLALDPAGYSLRHYRDFFTNPDWIRPLQNSLIIAPFATVLSVSLGTLAA IGLSQSHVPYRRAIMAILISPMIVPLIISATGMFFFYSQMGLWMENTLGFSRSFTGYV KVILAHAALGIPFVIITVTATLVGFDHSLTRAAANMGATPTQTFFKVQMPLILPGVVS GGLFAFITSFDEVVVVLFVGAAAQKTLPWQMFTGLREQISPTILAAATVLVAISIVLL ATVEMLRRRSERLRGLSPN" gene complement(1285516..1286445) /locus_tag="SKA53_06552" CDS complement(1285516..1286445) /locus_tag="SKA53_06552" /note="COG0679 Predicted permeases" /codon_start=1 /transl_table=11 /product="malonate transporter, putative" /db_xref="CDD:10548" /translation="MAALIDVILPVFFVIGFGYLAVWKGYFSDAGVDGLMKFTQNFAI PCLLFRAISTLDLQQNFDLLLLGSFYAGAFTGFLAGLLGARYIFGRDWEDSVAIGFCC LFSNSLLLGLPITERAYGATALESNYAIIAIHSPFCYGIGITAMEIARNRGAALTALP AKVLRAMFQNALIIGIALGFVVNLSGVPAPAVLTDALDLIARAALPAALFGLGGVLYR YRPEGDMRTIIYVVAVSLVVHPAVVWALAQAGGLGIAGTRSAMLTAAMAPGVNAYIFA NMYGRARRVAASSVLLATGLSILTVWGWLAVLP" gene complement(1286489..1287298) /locus_tag="SKA53_06557" CDS complement(1286489..1287298) /locus_tag="SKA53_06557" /note="COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10953" /translation="MSDTISFTILGCGSSGGVPRLGNDWGDCDPTDPRNARRRCSLLI TRQGKDGTTRVLIDTSPDMRSQLLDAGVSTVDAVVYTHAHADHVHGIDDLRMIVFQTR QRLPVWADGDTCDALLARFGYAFVQPAGSDYPPICDLNLIDGDVTIEGAGGPVTLTPF KVAHGNIDALGFRIGAVAYLPDVSDIPDAVWPALAGLDCWIVDALRRKPHPSHAHLEK TLGWITKVAPRQAVLTNMHVDLDYATIAAETPAHVLPAYDGLTLTFPCFRA" gene complement(1287295..1288098) /locus_tag="SKA53_06562" CDS complement(1287295..1288098) /locus_tag="SKA53_06562" /note="COG0084 Mg-dependent DNase" /codon_start=1 /transl_table=11 /product="hydrolase, TatD family" /db_xref="CDD:28171" /translation="MTQSPIAATPITDSHCHLDFPDFEGERDAVIARALAAGVTRMVT ICTKLHNEPAVRAIAEKYPSVFYAAGVHPMSAADHPPVTVDDLVALAQHPKFVGIGET GLDYHYTADSKAIQQSSLRIHIAAARETGLPLIIHARDADDDMARILAEEYRNGAYTC VMHCFSSSAALGKAALDLGFYLSMSGIAAFPKSQQLRDIFANVPLERVLLETDSPYLA PPPHRGRRNEPAYTAHTAAVGAALFGLDYAAFAAATNANFDRLFWKAAA" gene complement(1288109..1289215) /locus_tag="SKA53_06567" CDS complement(1288109..1289215) /locus_tag="SKA53_06567" /note="COG0470 ATPase involved in DNA replication" /codon_start=1 /transl_table=11 /product="Putative HolB DNA polymerase III delta prime subunit" /db_xref="CDD:10343" /translation="MSDDTIPEPDRLDGAPHPRETPVLYGQHAAEAAFLDAFTAGRMH SGWLITGPRGVGKATLAWKIATFLLADAPPDMLGEVTLNVSPDHPDARLVQSGAHPRL ALIRRPWDEKTAKLRGEITVDAVRNLKHFFQMSATDGGRRVVIVDAADEMNRNAANAI LKELEEPPAGAVILLVAHQPSRLLPTIRSRCRELRCGPLSPEDLARALAQAGHRSDNA AGLAALAGGSVGDAIRLLGSGGLALYADLVRLFGALPRIDRQAALALAEACSGRGAEA RFGLTLDLIDLFVARVARAGLLGAPDTQGAAGEALLLAKLAPDPRAAQAWAQLQQDLS ERSRHGRAVNLDPAALILDMIFKIEETAQGVAAA" gene complement(1289212..1289820) /locus_tag="SKA53_06572" CDS complement(1289212..1289820) /locus_tag="SKA53_06572" /note="COG0125 Thymidylate kinase" /codon_start=1 /transl_table=11 /product="thymidylate kinase" /db_xref="CDD:10000" /translation="MTRPRFITFEGIDGSGKSTQARRLAQWLGDQGHDVILTREPGGS QGAEEIRQLLLTGDTDRWSAETEILLFTAARRDHLEKTILPALAAGKTVVSDRFADST RVYQGATRGDLRAKVDALHALMIGREPDLTFVIDMDPATALERGLARRSGEDRFEDFG LPFQETLRHGFLALARAEAQRCVLIDGNRTPDQIASDVAAHL" gene complement(1289817..1290995) /locus_tag="SKA53_06577" CDS complement(1289817..1290995) /locus_tag="SKA53_06577" /note="COG1686 D-alanyl-D-alanine carboxypeptidase" /codon_start=1 /transl_table=11 /product="D-alanyl-D-alanine carboxypeptidase" /db_xref="CDD:11397" /translation="MKYTARGLIAGLIMICATAAQAQALETSARAAYVYDQTTGTVLL AKDADLPLPPASMSKLMTIYMAFEAIADGRLSIDDVLPVSAHAASFGGSSMFLDTTDR VRVEDLLRGVIVLSGNDASVVLAEALSPDGTEAGFGRMMTDRARQLGMTQSFFVNASG WPAAEHRMSVKDLGILSSRLISDFPTFYPLFSETEFAFDNRVPSNSQNRNPILAMGIG ADGLKTGHTQEAGYGLVGSAMQGNRRVIFVVTGLQTARDRAEESERIVNWAFRQFAER DLAVAGTQIASADVWMGAAPSVGLTVAEDLRLLVPVLHDGALDAQVIFDGPLQAPVSA GQQVGELIITLDGLPEKRVPLVTQADVPLGGFGIRMRTAAQVLWAKYGLTSGAEPDGA " gene complement(1291010..1291930) /locus_tag="SKA53_06582" CDS complement(1291010..1291930) /locus_tag="SKA53_06582" /note="COG0797 Lipoproteins" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /translation="MSRGRGLVRTAQPIRTEYRIGADICSQEVDKRGLNMTGKPDGYG RGSRLSCALCCALLLAACAPERAGSASDGALATAAAPGVLRTEQDVERPDIFEVTDTG LWDGRPSLGGIWVAHPDVRDPERVVIRNATNGQSTVGALFRRERANPGPVLQLSSDAA EELGVLAGAPTDLNVVVLRREEIVIAPADLPADPAAETAADTTVAPTADMTTDAAVAP VTVAALPPAGATALPARPLAQIGVFSVRANADAAAATLTTAGFGVSVTEQQAGGRSVW RVVAGSVADQQALARVRALGFVDAFVLADE" gene 1292066..1292152 /locus_tag="SKA53_t07224" tRNA 1292066..1292152 /locus_tag="SKA53_t07224" /product="tRNA-Ser" gene complement(1292393..1293196) /locus_tag="SKA53_06587" CDS complement(1292393..1293196) /locus_tag="SKA53_06587" /note="COG1082 Sugar phosphate isomerases/epimerases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10804" /translation="MTRALSLAHLTLLELPPPEFISVAAQAGFDAVGLRLIAVTETTA GYALMDDPQMLRDTLRALKQTGLRVNDIEFVRLTPAFDPQKLIGFLQTGAELGAKYIV TAPYDPDLGRLADNLAGFADLAAGFGLKPVLEFFPWTNVPDFQTALQIVQASGASNIG VLVDTLHFDRSGSLLSDLAATDPALLPFIHLCDAPVHPPYTQEALLHTARGARLIAGQ GAIALRDILAQLPQDIAIAVEVPLEHRAGLSAQAVAQAIFDHTQAYLRT" gene complement(1293193..1294896) /locus_tag="SKA53_06592" CDS complement(1293193..1294896) /locus_tag="SKA53_06592" /note="COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10778" /translation="MILLHGARTKVTRQYDLVVIGSGAAGLSAAVTAAHAGLTVMVVE KAPVIGGTTAWSGGWIWAPCNPLAIADGIVEDKDAPKQYLSHVLGNHFDESKVDAFLT YAPQMVGFFATKTALAFQSGSAIPDTYSDVVGAGQGGRSVIAAPYDGRALGDQIARLR LPLPATTFMGMTIQAGADLRAFMAMTKSASAFVYVARRFGRHLWDLVRHQRGMQLRNG NALIARLMRSALDAQVEIVTSANVTALQRDGQRVVGVTLQTADGTAVLGARCGVILAT GGASHDVARFADGPAQAPRSLATTFSDGAGARLAEAAGADFDRSAAAPFAYCPVSEIP HRDGTTSLFPHIIERGKPGIIGVLKNGKRFCNEGNGYHDYVTALLAATPQGDVAESWL IATRDFQRKYGFGYARPNPLPLGPHLRSGYVKQARSIRALAQVCGIDPEGLERSLRDY NAAALRGDDPAFGRGSSAYNRLQGDANITPNPCVAPIMRGPFLAIRVVPGSFGSFAGI KTNAHAQALCKDGRVIDGLYAVGADMKSVFGGYYPAGGINIGPAMTFGYVAAKHAAGQ I" gene complement(1294859..1295557) /locus_tag="SKA53_06597" CDS complement(1294859..1295557) /locus_tag="SKA53_06597" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11025" /translation="MDVGGKPAPKTRKTSWKKDPAAVKEDILEVATIAFAAHGLSGAN INEIAAKTETSKRMIYYYFGDKEGLYCQVLERVYASLRSSEDKLNVAGLDPVAALRRL VHATFDAHSNAPHFIRLVMIENIHNADYLRKSEIVPQLNRSIIVKLEEVCARGKAAGQ FREGANALQLHWLISAFSFYNVSNKATFSASFGGALFGRPAQEQLKAQVADMVLAAVV IGYDPVAWGADQSD" gene 1295723..1296727 /locus_tag="SKA53_06602" CDS 1295723..1296727 /locus_tag="SKA53_06602" /note="COG3181 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12519" /translation="MSFKLMGAVMALGLSATIATAQDYPSKEIQGIIQWGAGGSTDTV MRSVTPHAEAALGGTVVMQNMTGAVGAIALNYVVDADADGYTLLMGAENPMIYKVMGL GEEDYSAFTPINLLARGTAMLVANNDAPFDDYAGMLAYIAANPGELKLGATGPGGLPS VITAMMNAVEGDLDVIAVPYDGDGPALTALQGGAIDVMPAVLGAAVEAIRAGSIKPIL IFDTQTNATLPDVQIATDANAAYATYLPWGPFFGVFAKNGTPDDVIAKLTAAYATAAE HPDFVALMDSRGFTMMNISGAEADAFLTKWQQGTAWLLDDAGLTQASPTAFGIARPSN " gene 1296744..1296872 /locus_tag="SKA53_06607" CDS 1296744..1296872 /locus_tag="SKA53_06607" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAGIMPAGSWRRPRRYRLGGALRSKTGAQSFQMEKGGTDDAT" gene 1296859..1297437 /locus_tag="SKA53_06612" CDS 1296859..1297437 /locus_tag="SKA53_06612" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMQPDVTGTTDHNSSTAHVQQTNHPLQRRPGELGFAIFLTLASV FLLYNAYGISGFRALSGAGSVPMATTLVMTITALIVTLRTARLGRIAGETLAKDILPV MVIAFIGLLIVFGLLLKPLGFVLTAALFLICAIKLLSRKGWVYTISIAFLSLVIIWVV FRVVFTVLLPAGILPEAEFIQFFRNLFAGGAS" gene 1297437..1298945 /locus_tag="SKA53_06617" CDS 1297437..1298945 /locus_tag="SKA53_06617" /note="COG3333 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12667" /translation="MDTVLAILTVFTQPQLLLLVALGTFAGIYIGAIPGLSVTMAVSI LISFTFSWDVYPAISLMVGIYMGGVYGGSRTAILLNIPGSPSAIATAMDGYPMAQKGQ AGQAIGVTTVMSFFGGLIGIVVLALAAPFVSAFALSFQPRDYMLLAILGILLVGSLSS GSLVKGIFAGAFGIAIGAVGRDPLTFAERFTFDLRLMEGGISFIAVMIGMFGVSEALQ QLHNVDKRAVRQKIDKIIPSFSTIKTYLPLSLQTSSIGVIIGALPGTGGDIAALMAYD HAKRVTKNPEIPFGQGAMEGLVAPETANNAAVGGAFIPMMTLGIPGDAVTAIMIGALF IHGLNPGPMLMIDQPDMFWFIVGALLTANVFMLIFGLTGIKIFTKIVEMPRSIIIPLI LLLSIVGAYAVNNAITDVYWMLGFGIFGYFMRHYGYPLGPVILGIILSRMLDDNWRRA IISEREDLGRFFEGILTSPLSLTLFVAVILIFVSQTPIWRAAKTRLLGKATS" gene 1298942..1299793 /gene="aroE" /locus_tag="SKA53_06622" CDS 1298942..1299793 /gene="aroE" /locus_tag="SKA53_06622" /EC_number="1.1.1.25" /note="COG0169 Shikimate 5-dehydrogenase" /codon_start=1 /transl_table=11 /product="shikimate 5-dehydrogenase" /db_xref="CDD:10044" /translation="MTAPVPDVIKLGLIGDNISRSKSPKLHRTAGQLVGRNVTYDRLI PKDLALTFDQTFEKARLAGFRGINVTYPYKELVTAKVTVDDPLVAAIGAVNTVVFTPQ GPRGYNTDYSGFMAAYRSVMGEKSPGTVCLIGTGGVGKAVAFGLLGLKAATIRCVDLD AAKAADLAQSLRDAGTATQIETATDAIAAAQGADGIINCTPLGMVGIGGTPLPQSAMT GAQWAFDAVYTPVHTQFLQDATAAGLTVISGYELFFGQGIDAWRIFTGLDLDTTALRA AIQEDQP" gene 1299790..1301676 /locus_tag="SKA53_06627" CDS 1299790..1301676 /locus_tag="SKA53_06627" /note="COG1082 Sugar phosphate isomerases/epimerases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12523" /translation="MKTSIATVSISGNLPEKLAAIAAAGFDGIEIFEQDFIAHDGNPR DVGDLIRAMGLQITLFQPFRDFEGLPAPLRAKAFDRAERKFDLMQELGTDLVLVCSSC HPAALGGIDRAADDFAALGERAAKRGLRVGYEALAWGRHVNDHRDAWEIVRRADHANV GLILDSFHTLARKIDPDTIRRIPGDKIFFVQLADAPQIDMDLLYWSRHFRNMPGEGDL AVTDFMRAVVATGYAGPVSLEIFNDQFRGGSPKTIAQDGHRALIALMDDVKRQEPVAR LDLPVMPSRASVAGVAFVEFATKGDDATTLETLLATMGFARAGQHIAKKLTLWTQGDI RIVVNRETTGYASNAYTMHGTTVCDIGLDVDDAAAALARATALGAQPFAQPIGPGEID IPAIRGLSGSVLHFLDQTSGLNDVWSVEFKGAVTPPQNAGLLRIDHLAQTMSYDAMLS WSLFYTTLFDMQKSPMVDVVDPDGLVRSQALETADGAFRITLNGAETHRTMAGHFLAD SFGASVQHIAFASDDIFATADAMAQRGFQPLAMSDNYYADLTARFDLAPEFLAQLKRG NILYDEDAQGVFLQFYSQPYAGGMFFEIVQRRNTYTGYGAANAPFRIAAQKRLMRPKG MPKS" gene 1301984..1302241 /locus_tag="SKA53_06632" CDS 1301984..1302241 /locus_tag="SKA53_06632" /note="COG5591 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14598" /translation="MKKTLLAAIMMLAAVPAFAEPSCNPGAELTPIWQSIKTFEDEGG EVMSFKINGGGCYEIYGKVDGANMEVFFDPNTGEELDRIEA" gene 1302264..1302806 /locus_tag="SKA53_06637" CDS 1302264..1302806 /locus_tag="SKA53_06637" /note="COG3658 Cytochrome b" /codon_start=1 /transl_table=11 /product="putative cytochrome b" /db_xref="CDD:12981" /translation="MQHHANISSTDRVKVWDIGVRLFHWSLVGTVVLTYFLIDPRQVH RTLGYIVIGLIGFRLVWGLIGTRHARFINFIPAPMRLLSYLRDMLQRREARYLGHNPA GSVMVIVLLITLCAVGVTGYMMGMDAYFGQSWVEDTHKRLVNILIICVLLHLAGVIYA SWRHRENLVLSMITGKKDGD" gene 1302796..1303326 /locus_tag="SKA53_06642" CDS 1302796..1303326 /locus_tag="SKA53_06642" /note="COG2771 DNA-binding HTH domain-containing proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11904" /translation="MVIKKSRAVEQTTMAWRRKLFVLAAALQTGCGIIFAIDVFNERT EFTTQTLLELVAVIALSIGATLSISQYRALLRRNSKVQRELDAASGAFQDVIEQYFKM WGLTEAECDVALLSIKGVSIADIAVMRNTRQGTIKAQNSAIYRKAGISSRAELLAVMV EELIEGLEVKSPITSH" gene complement(1303333..1303449) /locus_tag="SKA53_06647" CDS complement(1303333..1303449) /locus_tag="SKA53_06647" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNRTIKDATVKRFHDDNHEQLQGHLKSDLPEAGRNTSP" gene 1303378..1303605 /locus_tag="SKA53_06652" CDS 1303378..1303605 /locus_tag="SKA53_06652" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MALQLFVVVVVKAFDGRVFDRAVHAPDLAVGPWVIRFCEAMIDT VGRAAQNLAKHHPGKAKTMRVEMMLPFTPQP" gene 1304516..1305040 /locus_tag="SKA53_06657" CDS 1304516..1305040 /locus_tag="SKA53_06657" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="TPR domain protein" /db_xref="CDD:5390" /translation="MRRFLPLLIAFLAQNAAADGCPVAPDHSVAVDNIYTELQLAPNQ MVARPYSNQLWELWLEAPDMPSQMMLDEGLRAMRGGDLIRAVDRLNALVSYCPFYAEG YNQRAFANFLREDYQAALPDLDQAISLNPRHTGALTGKARTLIELGEDDEAQVILKKA LALNPWLGERALLR" gene complement(1305270..1306235) /locus_tag="SKA53_06662" CDS complement(1305270..1306235) /locus_tag="SKA53_06662" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10495" /translation="MLEKERNLSDPTSEVIFHAYPQSPVAEKVRVVFGIKGLAWRSVE IPRLPPKPMLTALTGGYRRTPVMQIGADIYCDSQCIIRELERRYPSPTVMPTNEQGLM WCLSRWTDGALFDQTVRLVLGTAGDSLDKDFAADRGRLYLGEDWAAGLKQANADLPHL VSQLRAPLSWLNAQLSDGRAFLLGPQPAAIDAQFYHVVWFLRGRWADGPSFLSEFEDL VRWEDNVREIGHGTSRIMDPQDAIMLARNSEPTAVAGVAAHEPQGLLVGQSVAIKPDV NGGEQPVAGKIRYADAETVVIERVAADVGIVCVHFPRSGYRIDPT" gene 1306722..1307144 /locus_tag="SKA53_06667" CDS 1306722..1307144 /locus_tag="SKA53_06667" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIKKLQLSNLFWISLAINYLFAIMVVYAFLTVPDTIFDIENPEH ALAAFKLTYVRAVIVTFVLIAYPIVLFKSRKYITLFTFGLTAWVVALYIDDNLVLYRL IEYPSRGLVVFLQAVRPIVIACLIWMSFELTFKNYKKH" gene 1307149..1307646 /locus_tag="SKA53_06672" CDS 1307149..1307646 /locus_tag="SKA53_06672" /note="COG0841 Cation/multidrug efflux pump" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSDNRLNDNEISALLQAFDEVNETNASSLKQSTTFKALLISINI YFFSFVSIYFLSVNGLIDTPGQALENEGLRSALSARSHVIFWILSILNISAYFNIGFR TVCLTMFIYVLNTVIDNIVLFYELLSFEHRPYVTSFVFSLPLTLVGVVWMGIVFQNGV DREET" gene 1308224..1309147 /locus_tag="SKA53_06677" CDS 1308224..1309147 /locus_tag="SKA53_06677" /note="COG2962 Predicted permeases" /codon_start=1 /transl_table=11 /product="possible transporter, RarD, DMT superfamily" /db_xref="CDD:12307" /translation="MTATNEDSPRGLALAVTAYVMWGFLPLYMKALAHVPPTEVIAHR VIWSVPIAAVILLAMGRTADIRAAVSSPRTLGMAAVTAALISVNWGIYVWAIGSGHAL DAALGYYINPLFSVALGALLLGERPRGAQLFAIALAAIAVVVLTVAAGKIPIAALGLT FSWGFYAYFKKSLPVGPAQGFFLEVLLLTPLALAIIAWTFVNGQSHFANGSAPDTWLL LSAGLVTALPLIIYATGAKLLRLSTIGVLQYIAPTMIFLTAVFIFDEPFGTARMIAFP MIWAALVIYTVSLIRQSRRKRHAEIAVPHSV" gene complement(1309395..1309502) /locus_tag="SKA53_06682" CDS complement(1309395..1309502) /locus_tag="SKA53_06682" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSACALLTCARPLMVSGAFETAFFVTDARFAGFAT" gene 1309841..1310272 /locus_tag="SKA53_06687" CDS 1309841..1310272 /locus_tag="SKA53_06687" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMLEMTKPKMSRPFWVSFFLVYAIGFLALYSILFTPTGWFDTEN SIEYIAALKLSTIRTFVISFSMFTFPILLFTSLKWSKYFVISVTAWTLATYIDDYLVL YRIIEYPERGLVALLVAVRPLGVLAMIWMSFELTMKLAVKA" gene 1310276..1310767 /locus_tag="SKA53_06692" CDS 1310276..1310767 /locus_tag="SKA53_06692" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKRSNITNEEIGALLGSFSDLRKELSAGITQATSFKVALAISNI YIFMFTCLFFLIRGNIVPTFTPNLMAEDFLAIFGGKAIAAFWIFTILNISLYFNFSFN IVSLCATIYIASSVFDLVALFHERISFQETFYLTLLITTSPVLIFSMVFMVFTHKASV ETL" gene complement(1311021..1312166) /locus_tag="SKA53_06697" CDS complement(1311021..1312166) /locus_tag="SKA53_06697" /note="COG3454 Metal-dependent hydrolase involved in phosphonate metabolism" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnM" /db_xref="CDD:12782" /translation="MTEPIILANARLILDGEVVTGSLTIKDGVIADMAQGADVPKGAV DLGGDYLAPGLVELHTDNLERHLSPRPKVDWPYRAAIMAHDRELAGCGITTVYDAIRV GSIISGGGKRYGKYARQMADEILAMRAAGHLRISHHLHLRAEICSETLIAELDEFSDS DGIGIISMMDHTPGQRQFADITKFEAYVRGKNNLSADEFAGYVDFLYGLQAQYGAAHE AATVASANRLGAVLASHDDTTPAQVATSHGHGVTLAEFPTSVAAAEACHGHGIATIMG APNLIRGGSHSGNVAASDLAARDRLDILSSDYVPASLLLAAVRLGLIWDDLARGMATV TTAPAQAAGLQDRGRLALGQRADLVVFSLLADTAMVQQTYSAGRRVF" gene 1312201..1312875 /locus_tag="SKA53_06702" CDS 1312201..1312875 /locus_tag="SKA53_06702" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25172" /translation="MFERFAIFYTATGPLADFGAAWLGWDNAAGRVVAHPDIAGIDVA QVTATPRKYGLHATMKAPFRLSADSGPARLQRAVADFATRHAAVDIGPLALGHDHGFV ALRPVAPPAALHDLERAIVTELDAHRAPLTPADIARRRKAPLTRRQDQQMLDWGYPYI FDDFHLHLTLSGPLPDVQAARVVAGLQPLVAPLIAAPCTIDAVTLMGQDGGGMFHQIH RYPLTG" gene complement(1312857..1313399) /locus_tag="SKA53_06707" CDS complement(1312857..1313399) /locus_tag="SKA53_06707" /note="COG3709 Uncharacterized component of phosphonate metabolism" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnN" /db_xref="CDD:13029" /translation="MTGRFIAIVGASGVGKDSVMAALAASDPRLRLVRRVITRPSAAG GEDFDGVTEDAFHARAAQGDFALHWPAHGLHYAIPATVLADLAAGRDMLANLSRAALP AAKAQFDPFMVIQLTARRDVLAARLAARGREAADDIARRLDRADHGLPAGIAAVSIDN SGDLDATVGSVLRLLYPVRG" gene complement(1313396..1314079) /locus_tag="SKA53_06712" CDS complement(1313396..1314079) /locus_tag="SKA53_06712" /note="COG4778 ABC-type phosphonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnL" /db_xref="CDD:13915" /translation="MISVENVSKSFTLHNQGSTVIPVMAGASLHVAAGECVALVGASG AGKSTLMRMIYGNYLTASGRIMVGDTDVASAAPREVIALRRRTLGYVSQFLRVVPRVP TIDVVAEPLLLTGTGADEARAQAATLLARLNIPERLWGLSPTTFSGGEQQRVNIARGF AFAYPALLLDEPTASLDPTNRATVLAMVQEAKARGAAIIGIFHDHAAREALCDRQVDV TGFTPGLAA" gene complement(1314082..1314852) /locus_tag="SKA53_06717" CDS complement(1314082..1314852) /locus_tag="SKA53_06717" /note="COG4107 ABC-type phosphonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnK" /db_xref="CDD:13389" /translation="MTPLLQVENLAKYYGARIGCTDVSFDLYPGEVMGIVGESGSGKS TLLNCLAGHLKPDHGAVRFATRSDGLRDTVTMSEPERRMLGRTDWAFVHQHARDGLRM NVSAGGNVGERLMAVNARHYGDIRDQAIDWLGRVEITQDRIDDRPTAFSGGMQQRLQI ARNLVTGPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDMGLSAIIVTHDLAVVRLLAD RLMVMKDGHVVETGLTDQVLDDPQHGYTQLLVSSVLQV" gene complement(1314849..1315679) /locus_tag="SKA53_06722" CDS complement(1314849..1315679) /locus_tag="SKA53_06722" /note="COG3627 Uncharacterized enzyme of phosphonate metabolism" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnJ" /db_xref="CDD:24880" /translation="MKEYNFAYLDEQTKRMIRRAILKGLAIPGYQVPFASREMPMPYG WGTGGVQVSAAVLTPDDTLKVIDQGADDTTNAVSIRRFFQRTAGVDVTEKTGEASVIQ TRHRIPEQALREGQIIVYQVPIPEPLRFLEPSEVETRKMHALEDYGLMHVKLYEDISQ HGDIATAYAYPVKVEGRYVMDPSPIPKFDNPKLDMAAIQLFGAGREQRIYALPPYTKV VSLDFDDYPFQPTKADHACALCGSTTSYLDELITDDAGGRMFICSDTDYCATRVEDAA " gene complement(1315676..1316758) /locus_tag="SKA53_06727" CDS complement(1315676..1316758) /locus_tag="SKA53_06727" /note="COG3626 Uncharacterized enzyme of phosphonate metabolism" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnI" /db_xref="CDD:24085" /translation="MYVAVKGGERAIDNAHAWLAEERRGDLAVPELTVAQIREQMALA VNRVMAEGSLYDPDLAALAIKQARGDLIEAIFLIRAYRTTLPRFGASLPVDTGAMACD RRVSATFKDAPGGQVLGPTFDYTHRLLDFKLAADGEAGQVAEAAPLHGPTPHIMGFLD RENLIQPEPAGETTPPDLTREPLELPASRALRLQALTRADEGFTLGMAYSTQRGYARN HAFVAELRIGAVAVEMEIPELGFSIEIGEITLTECETVNQFQGSKTQPPQFTRGYGLV FGMTERKAISMALVDRALRWAELGEDNLGAPAQDEEFVLYHCDNIQATGFLEHIKLPH YVDFQSELELIRKLRRDAQQMQEAAE" gene complement(1316758..1317318) /locus_tag="SKA53_06732" CDS complement(1316758..1317318) /locus_tag="SKA53_06732" /note="COG3625 Uncharacterized enzyme of phosphonate metabolism" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnH" /db_xref="CDD:24069" /translation="MQIQTLDGGFATPPVDAAHAFRAIMTAMAQPGTIVTLAGAVPPA PVSVAAGVALLTLCDPETPLFLGAAQDNPGFRDWITFHCGAPFVTAGLAHFAYGTWDA LPLDGFALGSSEYPDRSATLIVELPELTNSGAVLRGPGIKDQAHLSLPDVAMFQRNAA LFPRGLDFIFTCGDRLAALPRSTRVG" gene complement(1317318..1317773) /locus_tag="SKA53_06737" CDS complement(1317318..1317773) /locus_tag="SKA53_06737" /note="COG3624 Uncharacterized enzyme of phosphonate metabolism" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnG" /db_xref="CDD:26863" /translation="MQATIDSQAARKGWLGLLAKAPAAKLAQLWAAANITPTHHVLRA PEIGAVMVRGRAGAVGAAFNLGEMSVTRASVRLADGTIGHGYVQGRDRTHALHAALID ALMQTDAAGQVDRAILSPLRAAAADRQTARAAKAAATKVDFFTMVRGED" gene 1317862..1318578 /locus_tag="SKA53_06742" CDS 1317862..1318578 /locus_tag="SKA53_06742" /note="COG2188 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /db_xref="CDD:11896" /translation="MTRTPIWQAIATRLRDEIADGIHRPGDKLPTEAALATRFGVNRH TVRQALAALATEALVRPRRGAGVFVTATPTDYPIGARVRFHQNLRAAGRSPAKQVLAL ETRAPSPAERDALGLTEGHVHVYEGLSLADGQVIALFRSVFPAARFPALLTHLHNDPS VTAALRTCGISDYTRASTRITAKLASVTQALHLQISEGAPILRTSSINVDADGTPVEA GLTWFAGDKVTLTLSDHETS" gene 1318648..1319820 /locus_tag="SKA53_06747" CDS 1318648..1319820 /locus_tag="SKA53_06747" /note="COG3454 Metal-dependent hydrolase involved in phosphonate metabolism" /codon_start=1 /transl_table=11 /product="alkylphosphonate utilization protein PhnM, putative" /db_xref="CDD:28167" /translation="MMRLTGAQVLSDGDFAQDDLWIDGTQIAQPAGAADRQIDLSGYL VLPGIIDLHGDAFERHLAPRPSAPFPAAIGLQSVDRDAASSGVTTAWMAQSWGWEGGA RSPDFAVQFMRDLAAYKPRALTDLRIQLRCETYTVDTADQLIAAVRDHGIDYVIFNDH LGEALDMIKTDPEALSVWGKRGGRDLAEFIRLLQDTKALSARVPRYLCTLAAAFDELG VKYGSHDDHDAATRDYYGMIGAKVCEFPTRHAPASVARANGDPVLMGAPNVVRGGSQS GNIAATDLIRAGLCDALVSDYHYPSLANAAFTMADTDILPLGRAWEMISTNPARIMGL DDRGVIAPGKRADLVICNAQTRAIEGTLAAGRWSHLCGDLADRISAAPMRMAHAAE" gene complement(1319821..1320435) /locus_tag="SKA53_06752" CDS complement(1319821..1320435) /locus_tag="SKA53_06752" /note="COG0110 Acetyltransferase (isoleucine patch superfamily)" /codon_start=1 /transl_table=11 /product="chloramphenicol acetyltransferase, putative" /db_xref="CDD:9985" /translation="MARLTADAPFIHDGCSIDDANFGAYVEIGQGSRIAHSTIGDYSY CDRFADIANTTVGKFANIAAFVRIGATDHPMEKASLHHFHYRSASYFDDAADDADWFM HRRTRRTMIGHDTWIGHGAQVRPEVTIGHGAVVAGGAIVTKDVAPYMIVAGIPAVPLR ARFSEPVADRMMALAWWDWPHDQLRAALDDFRKLRAEDFLERYE" gene complement(1320435..1321763) /locus_tag="SKA53_06757" CDS complement(1320435..1321763) /locus_tag="SKA53_06757" /note="COG3639 ABC-type phosphate/phosphonate transport system, permease component" /codon_start=1 /transl_table=11 /product="phosphonate ABC transporter, permease protein" /db_xref="CDD:12962" /translation="MTMLSTNGDLRQQTADMFTRKKRIALAVPAVIFAYFVYVFIAFD VAGLADRARMDNARTLVADAYSYKTHVARDNRDAELLFAIEGSRAGTYPAGEYPEWVS VDGTNMVVDLGGGNFVRYLDDTLVTFESPDFDTITLQLVDDVVVTNLPDPAPSWVNAS DTRVSITTDAGRLTYTRSKAEVFRYSNGWELFFFTLASPYHGAGLVDILAGPQLDDSR SNIVGAWQDFWGNTLWRHTDVMWALGETVLMAFLGTFGAAIIALPLAFLAAKNFAPVV AVRFAVRRVFDFVRGVDGLIWTIILSRAFGPGPLTGALAILVTDVGGFGKSFSEALEN VDEKQIEGVQSTGAKPIQRYRFGVIPQVTPILLSQILYYFESNTRSATIIGAITGGGI GLFLTQAMQTQNDWEKVTYYIILIVIMVMVMDTVSGWLRRKLIKGDGEGH" gene complement(1321760..1322632) /locus_tag="SKA53_06762" CDS complement(1321760..1322632) /locus_tag="SKA53_06762" /note="COG3639 ABC-type phosphate/phosphonate transport system, permease component" /codon_start=1 /transl_table=11 /product="phosphonate ABC transporter, permease protein" /db_xref="CDD:12962" /translation="MVDLSVSGRTGTQSMHDSYMAMTRRKRAYGGIILGVFVVLMVTG FQTVDARSAGGFWEGLPRIFDFPAGVVTEAWDRIDRMPANLAQFFPALIETINIAAVS TLVGALLGLVLSLLSTRGLAKWPRLIPVFRRIMDIMRALPEIVIALVLIFILGGGPIP AMIAIAFHTAGALGKLFSEVAENADLKPVEGLASVGANWSQRMLLGVIPQVAPNYLSY TLMRFEINIRASAILGFVGAGGIGYELRNAMTFGMGRFDLAAAIFVLLFLTIVFFDQI SSFYRNKLVKGYHA" gene complement(1322701..1323603) /locus_tag="SKA53_06767" CDS complement(1322701..1323603) /locus_tag="SKA53_06767" /note="COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="phosphonate ABC transporter, periplasmic phosphonate-bindingprotein" /db_xref="CDD:12559" /translation="MKKIIATALMTTALVAPAFAQDSITEFRIGLLGGENAQDRMAKN ECFRAYTEEALGVLTRLFTAADYNGVIQGLIGGTLDMAWLGASSYAAVYVEDPTVVEP VLVKTNLDGSFTYHSIGFARADSGITSLDDMAGKVFGFGDPNSTSGYLIPLVEIPAEG YSMEPGTFFSDVVFTGGHEQTIVAVANGDIAGGVTWADGLGDWEDGYNSGALRRAADA GLVDMNDLVEIWKSKPIPEGPVVLRTALPADVKQTMIDLTANLINVDADCAYGVAAGE TAGFSPIGHEAYETIIAVRRSQMN" gene complement(1323654..1324472) /locus_tag="SKA53_06772" CDS complement(1323654..1324472) /locus_tag="SKA53_06772" /note="COG3638 ABC-type phosphate/phosphonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="phosphonate ABC transporter, ATP-binding protein" /db_xref="CDD:12961" /translation="MLKFDKVTKTFGANTAVSAASFTVDKPMMIGIIGRSGAGKSTLL RILNRLSDATSGQITFDGLDVTALRGAAKRSWQSQCAMIFQQFNLVPRMDVVSNVLHG TLNRQSTLATMFNLYPTPDIHKAIDILDRLGMAAHAPKRAEALSGGQQQRVAIARALM QDPRIILADEPIASLDPMNAQVVMQALRDIHEEDGRMVIANLHTLDTARRYCDRVIGM RDGRIVFDGTPDQLTTGVARDIYGADDSFSESMTSTQIEQSAAAVAMMEKAAAL" gene 1324637..1325101 /locus_tag="SKA53_06777" CDS 1324637..1325101 /locus_tag="SKA53_06777" /note="COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain" /codon_start=1 /transl_table=11 /product="transcriptionalregulator, CopG family" /db_xref="CDD:10729" /translation="MKRITMTLDDDLLAAVDAHMDASGATNRSEAIRDLVARALAPQA PSDAACFGIASYTVEPDIRDLARKVPQVRQDHHDQFAAALSVPVDHATSLEVAVLKGS VAEVETIANALFLERGVRHGRLALVPVVVEDHSHAHGNGAPHRHARVVNRFA" gene complement(1325085..1326320) /locus_tag="SKA53_06782" CDS complement(1325085..1326320) /locus_tag="SKA53_06782" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MNAYIAVTASYWAFMLTDGALRMLVLLHFHSLGFSPVQLAYLFV LYEIAGIVTNLSAGWIAARFGLTLTLYLGLGLQVLALLALAQLDPTWAIGTSVVFVML VQGASGVAKDLAKMASKSAVKILAPDGGLFRWVALLTGSKNAVKGLGFLLGAVLLATL GFTAAVLAMAAVLAVILLAVLAFMPAGLPKGRKGAKFTEVFSKSHNVNWLSAARVFLF GARDIWFVVGIPIYFYAVLSDGTVAGNRTAFFMIGTFMAVWIILYGAVQAAAPKLLRA DTRPAAELIGAARQWAWGLAAVPAILTSAVVLSTGPQLWLTVTLVLGLLVFGAIFAVN SALHSYLILSFSKAERVTMDVGFYYMANAAGRLSGTLLSGLTYQAGGLALMLGAATLM VALSALAAGRLERSVTQTG" gene complement(1326338..1327342) /locus_tag="SKA53_06787" CDS complement(1326338..1327342) /locus_tag="SKA53_06787" /note="COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glyceraldehyde-3-phosphate dehydrogenase, type I" /db_xref="CDD:9932" /translation="MIMTTYAINGLGRIGKLALRPLLEKGARIAWINDAVGDPAMQAH LLEFDTVHGRWDADFAHDADSLTINGTRLPFIGTKDIAALPLDGVDVVIDCTGVFKTA AKLAPYFAAGVKKVVVSAPVKDGPTANIVYGVNSETYDPKLHQIVTAASCTTNCLAPV VKVLLDGIGITHGSITTIHNVTNTQTIVDRPAKDLRRARSALNSLIPTTTGSATAITL IYPELAGRLNGHAVRVPLLNGSLTDCVFEVPRPTTAQEINALMKAAADGPLKGILGYE ERPLVSADYTNDTRSGIVDAPSTMVVNGTQVKLYVWYDNEMGYAHRLVDVALMVGASL " gene complement(1327339..1328166) /locus_tag="SKA53_06792" CDS complement(1327339..1328166) /locus_tag="SKA53_06792" /note="COG0640 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator/arsenate reductase" /db_xref="CDD:10268" /translation="MEKEISTRLTTLGHPQRLAVFRLLMRRYPDRVPAGELAQALDIK PSTLSAYLSALMQAGLVTQDRAATSLQYSIAMAAVNQTFDYLFNDCCRGRPDLCAPAP LGHDRMTRTKYDVLFICTGNSARSIFAESILRKEAGDRFIAHSAGTLPRSELNPFALA VLQQKGHDVTLLQSKNVGAFMGLDAPVFDFVFTVCDQAANEECPAWSGQPVSAHWGMP DPVKATGTDAEKSLAFQRAYGALANRIKLFTALPIASLDRLSLQKAVDQIAQSPSEI" gene complement(1328244..1328813) /locus_tag="SKA53_06797" CDS complement(1328244..1328813) /locus_tag="SKA53_06797" /note="COG3218 ABC-type uncharacterized transport system, auxiliary component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12556" /translation="MALGGCSAVSALNAAGTALDTYDLIPPSGGTTGRQTRRTLLVAL PDATAAISTDRILVRPDAAAITYLPDGRWTSELPRVVQSLLVRAISGTGRIGYVGPAE GGPVPDSALLTRVDAFDVTIGADRMPVAAIDITLTVLNDRDQRVIGSRRFSQSVPVAG DSPAAIVAGFQALVDALLPAMADWVLDRA" gene complement(1328866..1330560) /locus_tag="SKA53_06802" CDS complement(1328866..1330560) /locus_tag="SKA53_06802" /note="COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component" /codon_start=1 /transl_table=11 /product="Putative ABC transporter, periplasmic substrate-binding protein" /db_xref="CDD:11177" /translation="METRANFILIGIFTLAAMLGTLGFFIWLASVQLDRQYVTYGILL DDVSGLDAAGAVTYNGIAVGSVIGLRIFEDDPSKVFTIIQVDAATPVSTATIAQLQSQ GVTGVAFISLSATDGVAAPIDTFAGGLPIIDSKRSTVQALVEDAPNLLAEARLLLQQV QGFAGAENQALVADILRNLSRTTGRLDQALSDFSEISGTVRDATAQITQFTERLDTIG EAVEITLRSTDSALVAVQQAFVSADVVLNTTGPMLDRADGAFTLAENLLREQIPMILA QVSETVLQTNAAVQDIQTRTGRTLDGFGETAALLNARLVELETTLADATIAFDAVTTA SESLEVLVEGDGAALIAEVRAAVATVETVVNTDLPLIVADVRRAVQTASVAVEDVAAD VTGFTGRLTPLADDGQAALTAATDLIAQAQTSLAALNTTLGVVDGALGSAQTTFDTAN DVLQTDLGPVLSDLRVSAERISTAVEDVTADVPAIAADLRALIARADQVMVQVQDAVA QAAPGISDFSTGGLTELSRLATEARGLVATLNTLTRRIGNDPAGFILDNRVPEYRR" gene complement(1330560..1331357) /locus_tag="SKA53_06807" CDS complement(1330560..1331357) /locus_tag="SKA53_06807" /note="COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATPase subunit" /db_xref="CDD:10849" /translation="MPSDPNIDPIIRVRGLVTRFGTTVVHDGLDLDVKRGEIIGVVGG SGTGKSVLLRSIVGLLKPAEGQIEVFGQNVRDTDADDYRALRRRWGVMFQDGALFSSL SVRQNVEAPMREQLDLDDDLRALLAGIKVRMVGLPNKAQDNYPSELSGGMRKRAGFAR AIALDPEIVFLDEPTAGLDPIGAAAFDTLIKQLQLSLGLTVFLVTHDLDSLHAICDRI AVLADKKVLAVGTMQEMLALDHPWVHEYFHGPRARAATPVAKPKETE" gene complement(1331357..1332499) /locus_tag="SKA53_06812" CDS complement(1331357..1332499) /locus_tag="SKA53_06812" /note="COG0767 ABC-type transport system involved in resistance to organic solvents, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, inner membrane subunit" /db_xref="CDD:8287" /translation="MSATRLQTAPDMSGQVRFDSDGARLSVQGRLTIDSFEHLDRDVI AQQASRAEVVDIAQLSHMDTAGAWFLLDLAGRTSAGAASVITGASDAQTLLIEAVRTN LPPKAAGAKPAVRLVDHFETLGRRVALAGSHALEMLSFLGQVIAAMARVIRHPRALRL TSVVHHCQQVGLQAVPIVALMAFLIGVVLAFQGSAQLRQFGAEVFVVDLIAISILREL GILLTAIIVAGRSGSAFTAAIGSMKMREEIDAMRTLGLDPVAILVVPRVLALVLMLPA LGLIANVSGLFGGALMSWIELDVSPAVFQARLVSNTDVWHFNVGMIKAPVFALIIGII GCYQGMKVGGDAESLGRQTSASVVMAIFMVIVADALFSIFFAIVGV" gene 1332674..1333525 /locus_tag="SKA53_06817" CDS 1332674..1333525 /locus_tag="SKA53_06817" /note="COG0589 Universal stress protein UspA and related nucleotide-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10459" /translation="MDRLTALIVVDATCSDDRIRHYITSLPADGVHLSVLVVGAAPSL PMWAYGSAPYGPIIFPENWHETYQAGGSEVADRADVIEKLLQTAGVAGDVTSAYGEAS VLDDQIAARAALCDVVLIDPALADASLTFQQALEGVLFKTPVAVALNAAGVDRVLQAK HPMLAWDGSLPALRALHRALPILRQAAQVTILVVDPNPHGPEGQNPGSDVATWLTRHG CTVTLQQSPSAGQDTGSCILARAGEIGADLIVMGAYVHSRARQRILGGTTQIVISQTD HAVLLSH" gene complement(1333571..1333897) /locus_tag="SKA53_06822" CDS complement(1333571..1333897) /locus_tag="SKA53_06822" /note="COG2319 FOG: WD40 repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTKDTNKDGFAPDVLDTLAAVAPAATWMHPAWIAIMTQVSTALA TFVTARFKEDLDLQQALLRCKSLAEAQHVQAAFIQKAINQYQAETGKLITITGKMAAE QHPVAD" gene complement(1333971..1334744) /locus_tag="SKA53_06827" CDS complement(1333971..1334744) /locus_tag="SKA53_06827" /note="COG3568 Metal-dependent hydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12895" /translation="MGHFAVSFIRAGRAYIMGMLPVTHKSRPLRLASYNIRKAKGVDG RYDPGRIVDILAGLDADVIALQEADFRWRGRPGALSPDMIRQHTDYDLVPVTTQGDSL GWHGNAVLVRRGSLVTDVKRLILPGLEPRGALRIDMDAGGPFSVIATHLGLTRFHRQR QLAAISAAVAPDGRPTAVLGDFNEWSATRGLDPLRADFTVHAPGKSFHAAMPMAALDR IALGRGLTLTDGGVVQTRQSLRASDHLPIWGDVLITRAS" gene 1334736..1335398 /locus_tag="SKA53_06832" CDS 1334736..1335398 /locus_tag="SKA53_06832" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTQASEHNNTRMRLMAPIWVALALAAVWAASQGWWPLAAMSTLA FFLSMAPILLASQYNIALPLPFLVATVAFIIASLIFGEVFDIYYRIWWWDMALHGSSA VALGMIGFLFIYMLFAGDRFAAPPGAIAFLSFTFALSIGAVWEIFEYGMDQLFGMSMQ KSVDDTMIDLITDAIGAVMSALAGYAYLKGRSAGVLGRLIRDFIKLNRHLYAKGRSRN DK" gene complement(1335408..1336169) /locus_tag="SKA53_06837" CDS complement(1335408..1336169) /locus_tag="SKA53_06837" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, inner membrane subunit" /db_xref="CDD:10470" /translation="MTARQVYVPVAALLIFLAAWEALVWVMGWPTFKMAAPSDLPPAY AKYWELFLTMGWQTLWRTVAGLLLAVVFGTALGMVMGFSRTMRDALYPLLVGFNAVPK ATVVPIVALMFVGWHDFNTVLIAFMISFFPIAVSVSIGLSTLEPEYRDILRSLGASQS TIFWKIALPKTLPEFFGALKVSVTLAFIGTNLMEIVSPHGRGLGALFDSGKTNSDYPL MFAVLIALALLGILLYYIVVALEKTFAGWADRSNI" gene complement(1336166..1336966) /locus_tag="SKA53_06842" CDS complement(1336166..1336966) /locus_tag="SKA53_06842" /note="COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATPase subunit" /db_xref="CDD:10838" /translation="MTLDNLIDITGVRHAYRTASGPLPVLDGLELSVPEGGFVAVVGP SGCGKSTLTRLIAGLLIPDQGEVRVHGTRITAPRSNVGMAFQNPVLLEWRTILQNVLL PLEIVPTKLSRAQGEDRARKLLALVGLEGFENKRPSELSGGMKQRASLCRALIHAPEV LILDEPFGALDAFTREDLWQIMHRVKAEEPFTGVLITHDLRESIFLADQVVVLSGRPA RTQYVLDIPDTGLRTLDHLYTPEAATMLNTLRHQIEVAQGRVPAEASA" gene complement(1336963..1337967) /locus_tag="SKA53_06847" CDS complement(1336963..1337967) /locus_tag="SKA53_06847" /note="COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic substrate binding protein" /db_xref="CDD:10584" /translation="MFNRTFLVVALTGASAVHAQTDLPFTLDWRFEGPAAPYFAAIDN GNFAALDLNVTVSAGDGSLDAIPKVATGAFPVGMADINSLIKFLDQNPGAPVIGAMMI YDKPPFAVIGRRSLGIDDTPQSLEGKILGAPPPDGAWAQFPIFAAENGLDTAAITVEP VGFPTREPMLAEGNVAAITGFSFTSYLNTARLGVPEDDLVTLLMADHGVDLYGNVIIV NTDFAASNAEVVANFLQGVAEGWATAIADPEAVIPMLIERNPAADAALELRRLQLSIQ DNVATDWVMANGFGIIDDARMANAIEQIATTYAFVNTPDASMYFTSAYLPEGGFSLAE " gene 1338013..1338150 /locus_tag="SKA53_06852" CDS 1338013..1338150 /locus_tag="SKA53_06852" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRPTKTPAAVAHAGQAHAMSNMICLIVVQFATKASKNYTDDQTT P" gene 1338257..1338559 /locus_tag="SKA53_06857" CDS 1338257..1338559 /locus_tag="SKA53_06857" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNIRSKLLLLAGMSLAACTEMATTGTASNGSRFLPDLPESVRAI AAPGQNLDQVVFLEDDNCYWYEHAGPVETTLLPLRTARGNAICAEQPTAPAAPAAT" gene complement(1338593..1339336) /locus_tag="SKA53_06862" CDS complement(1338593..1339336) /locus_tag="SKA53_06862" /note="COG1376 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11091" /translation="MLNRRHFIVTGAALFSQPIAAQTLAAPAIDTLTQGEIAADLPEF ADLPPPPPPVSPPEMWAGWDRRVIPANYDPMTSNPWGFHPRFLPTLVQANDGLRAGDI HVDAVARYLYHVRGDGTAMRYGVAIARGNLYEPGTYTIRRKAKWPTWRPTDAMIERDP ETYAQHANGMDGGPDNPLGSRALYLFDGNRDTYLRIHGTPSPRSIGGRASSGCVRMVM AHIIGLYEEVNTGVSAILYPTENDITARS" gene complement(1339464..1340480) /locus_tag="SKA53_06867" CDS complement(1339464..1340480) /locus_tag="SKA53_06867" /note="COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="Zinc-containing alcohol dehydrogenase superfamily" /db_xref="CDD:10474" /translation="MKAVALTRYLPVSDPACFVDVDLPQSVPTGRDILVAVKAVSVNP VDTKVRKSKGADVVENPPRVLGYDAAGVVAAVGPDVKLFAVGDEVYYSGDITRSGSNA EFQLVDERIVGRKPATLGFAQAAALPLTTITAYESFFDRLGIDRDGADAGQSILIIGA GGGVGSIGIQLAKAAGLVVIATASRPETAAWVTALGADHVIDHRADMVAQVRALGLHH VDHIAVFNDMRHWEAAVELIRPQGGIVSIDNTDVPLPMAAMKTKAASLHWEFMFARAM FQTPDMIAQHHLLTYVADEIDAGRLRTTLDTVLRPINAENLRKAHAMIETGTAKGKIV LEQS" gene complement(1340496..1341677) /locus_tag="SKA53_06872" CDS complement(1340496..1341677) /locus_tag="SKA53_06872" /note="COG1804 Predicted acyl-CoA transferases/carnitine dehydratase" /codon_start=1 /transl_table=11 /product="CAIB/BAIF family protein" /db_xref="CDD:11514" /translation="MAGALDGIRVLDLTRILAGPTCTQLLGDLGAEVIKIENPATGGD DTRGWGPPNVCDTNGQPTDLSAYFMAANRNKKSVSIDISTELGQQQVRALARSADVVV ENFKPGGLAKYGLGPDDLLTRQPGLIYCSISGFGQTGPNRDKPGYDLMAQGFGGIMSL TGEPDGAPMKVGVGVADVMCGMYATVGILAALRHKEHTGEGQHIDIALVDSQLAWLIN EGTNYLESGDLPQRRGNGHPNIVPYHVFAVADGHAIIAVGNDSQFARFCDFLGCADIV TDARFATNLARTQNRDALLAVIGPRLAARPLAAVIAGLEARKVPVGPVNTIDLALGSD QAQARDMVVAMPRVDVQKGQVRLLGNPLKLSRTPVTYRLPPPHCGQDSEEILAQLSLD D" gene complement(1342217..1343338) /locus_tag="SKA53_06877" CDS complement(1342217..1343338) /locus_tag="SKA53_06877" /note="COG0673 Predicted dehydrogenases and related proteins" /codon_start=1 /transl_table=11 /product="putative oxidoreductase protein" /db_xref="CDD:10542" /translation="MVNYGLVGCGMMAREHIMNINLLPHGRVCVVYDPVPELAQAAAV LAGGAHVADSLDALLAFADLDAVVIVSPNYLHVPQLQQIVATRPLPILCEKPLFTNPS DAALVDDLFAAYPHPVWVAMEYRYMPPVAALVAQAEAVTGGVRMLTIREHRFPFLPKV GDWNRFNAKTGGTLVEKCCHFFDLMRLIMQDEPVRVMASAGQAVNHIDERYDGQAPDI WDNAYVIVDFARGSRAMLELCMFAEGSRYQEEISAVGPLGKIEALVPGPGRFWPLALG EPPVPQLIISPRDPKGPFISEIPVDPTLLEAGDHNGSTFYQHQRFNAVVRGEGVVEVT VQDGAAAVAIGMAAQQSARTGQAVGLPQSPVTTAQVAGL" gene complement(1343350..1344057) /locus_tag="SKA53_06882" CDS complement(1343350..1344057) /locus_tag="SKA53_06882" /note="COG2188 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11896" /translation="MATPSALPKFVQLSEMLIREIAAGHLADGARLPPEREMAETLGV AVGTLRKALADVAAKGLLQRVQGSGNYVRKLEAVDSVYAFFRLELKRGGGLPTAQVLS VDLLAKPADARPFGEHAQGHRIRRLRWLGGVLVGLEEIWLDGGYAPAIGPQDLIDSLY LFYRDRLGLVIAAAEDRIGVAPLPDWTPPDFHLPPGAVAGYIERNSYLAGRVPVEFSR TWFDADRAQYISRMGKG" gene 1344161..1345318 /locus_tag="SKA53_06887" CDS 1344161..1345318 /locus_tag="SKA53_06887" /note="COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:28272" /translation="MSVVPVTSADLDAAEVSWFSALCSDDYQFLGVPDGDLRSSWDHC RDIALTAEAQGFRNILAPSSYQVGQDTLSFVAGMAPLTDKINFLAAIRCGEVQPIMLA RTIATLDHMLQGRLTLNVISSDFPGEVADSKYRYRRSHEVVEILRKCWTQDEVSHDGE IYQISKLPTDPARPYQQNGGPLLYFGGYSPDALELCGAQCDVYLMWPETRDVLAQRMK DVHARAAAHGRTLDYGLRVHMIVRDTEAEAKDYADYIASKLDDEYGKLIRDRAHDSIS LGVAHQSRARELADQFGYTEPGLWTGIGRARSGCGAALVGSTDQILSKIEDYQKMGIR AFIFSGYPHIAEAEHFGARVMPHLKTCSLPHAYGRVPTATPATPLGIGQRR" gene 1345318..1346208 /locus_tag="SKA53_06892" CDS 1345318..1346208 /locus_tag="SKA53_06892" /note="COG4989 Predicted oxidoreductase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14119" /translation="MQRIQITNDLSFSRIIYGMWRLGDDTDTSPKHVQAKIETCLAQG ITTMDQADIYGGYMAEEIMGHALRAAPALKHQIEIVTKCDIIVSAGRYAGAGVKHYDT SAAHVTASVDHSLRLMGVDRIDTLLIHRPDPLMDHHDTGAALDALVASGKVRSVGVSN FKQHDWTLLQSAMQTPLITNQIELSLTAHQGFTNGDVAYLQERSVPIMAWSPLGGGAL MTGTGAVQDALAAVAAEQAVDSAAVAVAWLLAHPARIMPVMGTNAIGRIKTLSDALKV TMDRETWFKLYTAALGQEVP" gene 1346208..1346717 /locus_tag="SKA53_06897" CDS 1346208..1346717 /locus_tag="SKA53_06897" /note="COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:2150" /translation="MPQTFDPQTDSTRFRTALGSFTTGVTVITTDSPEGAIGIVANSF ASVSLDPPLVLWSPAKSSKRFEHFAGARRFAIHVMAADQRDICAAILESKTAIRNVPT HLSHCGMPIIAGALATFECNLETSHDAGDHVIIVGRVTKAHHTEGQPLTFHGGQYGTF APHHPPSSE" gene 1346794..1347390 /locus_tag="SKA53_06902" CDS 1346794..1347390 /locus_tag="SKA53_06902" /note="COG3090 TRAP-type C4-dicarboxylate transport system, small permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12429" /translation="MSVLFGILWPLERFNTAVLAIGKLIAVVALAVMVALILGQVFFR YVLSDAPNWTEEGARFGMLWMTGLMAPLAYRIGGFVAIDMLERALPRLLAGLLGLLLL AISLWVLVIAWERGLNNHLLTLSGRGCSSSLQWPFGIEIGKCGARFQNNYQYASLWVG VSLLIAVNVELMLRQVITLLGQGDRLTSFKQTEIAGAE" gene 1347390..1348958 /locus_tag="SKA53_06907" CDS 1347390..1348958 /locus_tag="SKA53_06907" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="probable ABC transporter permease protein" /db_xref="CDD:11306" /translation="MLILFLPLFLMLILIGLPVVFALMAAPFAMIMAEGDTRNVVAGL YRNLYNGMDSFPLMALPFFMLAGEIMNRGGITMRLVEFAQAFMGHMRGGLAHVNILSS MLFAGLSGSAVADTSAIGSTMIPAMEKNGYTRRFAAAITAASSVIGPIIPPSGIMIIY AYVMGESVASLFLAGIVPGILVGVGLMVMVRLMADRYDLPKAERIVHKNQTITPVEYW VSFALLRINFAGLLMALYSFIAGPVGLARVNDAGDTVHALNLWVVFAALLVASHFILM GYRKRVTSDFRIVCKKAVAPLQTPIIILGGILVGVFTPTEASAIAVAYALIVSFFVLR SMKFSDLSGVLTRSAIATSAVLLLVGAAVAFKTVVALSYAPQILSDYILSLSENPLVL LFLINVLLFVVGMFLDAGPAIIILGPILGPIFVDMGVHPVHFAIIMSVNLTVGLATPP MGLVLFVASTVSGERVETIARAILPFLAVEIAVIFLITYVPAISMTVPYLAGFLGCAP DVGFSACISPVPIQ" gene 1348985..1350040 /locus_tag="SKA53_06912" CDS 1348985..1350040 /locus_tag="SKA53_06912" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctP subunit" /db_xref="CDD:11350" /translation="MLKKLTQLAMTAAVLVTPMALAAQDFTIRATANSNTDDEDYDGL VVFKDYVEAASNGRIAVELFIGTQLCATGEECLEGVSEGSIDVYISTSGGAAGIFPYV QVLDLPYLMSSDRVAEAVLQGDFVRTMRDMALADSDNTIRLMTIGNTGGWRNFANTER RVQTPADLQGLKLRTVVADLPIQLVEAMGASATPIQWPELFTSLQTGVVEGTANGITD IMNMKFPDAGLQYLTLDGHSYMGALWWMNNDAFLAMPEDLRRVVVDGFAALQQATFAS PKRKSIAAYEAFLAGGGDLYVPTPEEKAMFAEAAQPVYEWFSANVQGGPDMLTALQEA VAQVETEMAAGYASDLN" gene complement(1350103..1351815) /locus_tag="SKA53_06917" CDS complement(1350103..1351815) /locus_tag="SKA53_06917" /note="COG0659 Sulfate permease and related transporters (MFS superfamily)" /codon_start=1 /transl_table=11 /product="sulfate permease" /db_xref="CDD:10529" /translation="MNTRLIRYLPILSWGRHYTRSDLGNDLTAAFIVTIMLIPQSLAY ALLAGLPAEAGLYASIVPIMLYAVFGTSRSLAVGPVAVVSLMTAAALSNIVEQGTMGY AVAALSLAGLSGVILVAMGLFRLGFVANFLSHPVIAGFITASGIIIAASQLKHILGIS AEGHNLAELVVSLGRNLGGINWITALIGVLATGFLFWVRKGLKPVLTKLGLGAGLTGF LVKLGPIVVVVATTAAVWYWGLDARGVKIVGAVPQSLPPFTLPSFSPALLQQLLLPAF LISIIGFVESISVAQTLAAKKRQRIDPDQELIGLGVANIGASLTGGFPVTGGFSRSVV NFDAGAATPAAGAFTAVGLAIAALALTPLIYFLPTATLAATIIVAVLSLVDFSILKRS WAYNRGDFAAVATTILLTLALGVEAGISAGVLLSVLLHLYRSSKPHIAEVGQMPGTEH FRNILRHKVITHPSIVTLRVDESLYFANARYLEDRIQARVAGDKEVRHVILQCSAINE IDFSALESLEAINDRLREMDVKLHLSEVKGPVMDRLAEQHFLDQLTGRVFLSQYEAVQ GVLA" gene complement(1351874..1352191) /locus_tag="SKA53_06922" CDS complement(1351874..1352191) /locus_tag="SKA53_06922" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MWRGITADHWVCDNITDTGGAIALDLWQLEQGAFEMTVNVGDID RMIRSTLGIVLLALPFIGGMAVFDSLLATILSVVVGLVMLGVAVTRSCPLYTVLGMRT CKV" gene complement(1352169..1352840) /locus_tag="SKA53_06927" CDS complement(1352169..1352840) /locus_tag="SKA53_06927" /note="COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /codon_start=1 /transl_table=11 /product="cyclic nucleotide-binding protein" /db_xref="CDD:10533" /translation="MAQDDTWLDRFAGLARLEPTIKAQLLARSAVVVAPAGTVIFGPG KSPENMLFLLAGTVRVQQVSDTGHEIVLYRIEAGESCVLTTACLLAYDDYAATGIAET DVRAAAVPRDVFDDLVAQSKSFRNFVFAAFSKRITDLFLMIDEVAFQRIDVRLADKLL KLSHGDDRIATTHQKLAVELGTAREVVSRQLQEFQRRGWIAQARGVIMIADRAGLQDV ARHHG" gene complement(1352886..1354109) /locus_tag="SKA53_06932" CDS complement(1352886..1354109) /locus_tag="SKA53_06932" /note="COG2379 Putative glycerate kinase" /codon_start=1 /transl_table=11 /product="MOFRL domain protein" /db_xref="CDD:12051" /translation="MIHLTQAEKRSDMNDMRSTARRLFDAGVQAADPVAAVTRHLDDL PAPALIVAVGKAARGMAHAALSRFAGVPAIVVTNYENAQPLDGAAVFAAGHPVPDESG AKAALAVIAALRAAQGPVLALISGGGSALLPAPAGALTLADKIAVNRLLLASGLDIRA MNLIRQQLSDIKGGGFLRHAAPNNVTALILSDVVGDDLSAIASGPTAPPIGTAAQAVT MLRDANLWDRVPPSVRDHLAQARPAPDLPAARNILIGSNRQSVAAMAQAAGVAHVIAA PVTGDVADAAKLICDQARPGITLWGGETTVMLQGTGRGGRNQELALRIAIVAADRGWG DWTCLQAGSDGRDGPTDAAGGIVDQDSLGKIAGLAALLANNDSYAALAQVDGLLLTGA TGTNVADLGVLIRRG" gene complement(1354139..1355440) /locus_tag="SKA53_06937" CDS complement(1354139..1355440) /locus_tag="SKA53_06937" /EC_number="5.3.1.5" /note="COG2115 Xylose isomerase" /codon_start=1 /transl_table=11 /product="xylose isomerase" /db_xref="CDD:11823" /translation="MTDFFKGIPAITYQGPDSDNDFAFRHYNPDEVVMGKTLKDHLRF AAAYWHSFAWPGGDPFGGQTFDRPWFGDSMDAARMKADAAFEMFQILGVPYFCFHDAD VRPEGNSFAQNTRNLEEIVDYFAAKMEATGVKLLWGTANLFSHRRFMAGAATNPDPDV FAFSAATIKTCMDATMKLGGENYVLWGGREGYETLLNTDMGRERAQAGRMLQMVVDYK HKMGFKGAILIEPKPQEPTKHQYDYDVATVYGFLKEFGLEGEVKMNIEQGHAILAGHS FEHELAMARELGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALAYYEVLRAGGFTTGGT NFDAKLRRQSLDAEDLILAHVGGMDACAAGLKAAAAMLADGKLESARDARYAGWDTEA GRALLASDLDAITAKVMAQAINPAPRSGRQERLENLVNRYL" gene complement(1355437..1356876) /locus_tag="SKA53_06942" CDS complement(1355437..1356876) /locus_tag="SKA53_06942" /note="COG1070 Sugar (pentulose and hexulose) kinases" /codon_start=1 /transl_table=11 /product="Xylulose kinase" /db_xref="CDD:10793" /translation="MYIGLDLGTSGLKAVLIDDAQAILAEATAPLQVARLAQGWSEQA PSSWLDAADAVMQSLAAQVSLGAVRGIGLSGHMHGATLLDSSDEVLRPCILWNDTRSA VEAAELDADPKFRALTGNIVFAGFTAPKLAWVAKHEPAIFARVARVLLPKDYLRLWLT GEAVAEMSDAAGTSWLDVGKRDWSDDLLAATGMTRAQMPRLVEGSKVSGHIRDALASR WGLPKGVVVAGGGGDNAASAVGVGVVKAGDAFVSLGTSGVLFAASDAYNPDAASAVHT FCHALPDTWHQMGVILAAADALNWFARVADKPAATLTADLGALQAPGKPLFLPYLGGE RTPHNDAAIRGAFLHLDHATDSAAMARAVLEGVTHAIRDCHDALTSTGTRITRLIAVG GGSKSDYWVQAIATSLDLPIALPVAGDFGGAFGAARLGLMAATGAGAEVATAPKIARM IEPDTKLTAAFSQAHARYRASYTALKGLS" gene complement(1356878..1357618) /locus_tag="SKA53_06947" CDS complement(1356878..1357618) /locus_tag="SKA53_06947" /note="COG1129 ABC-type sugar transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC sugar (xylose) transporter, ATPase subunit" /db_xref="CDD:10850" /translation="MRNISIAFGGIRAVDGVSLDLYAGEVVGLLGHNGAGKSTLIKCL SGAYQADSGEFWIEGKKAQIASPRDSRNLNIETIYQTLALADNLDAASNLFLGRELTT RFGFLDDARMEAETRRIMAQLNPNFKKFKEPVSALSGGQRQSVAIARAVYFNARILIM DEPTAALGVHETEMVADLIKELKNQGLGIFLISHDTREMMDLCDRVAVMKNGQLIGNE RVEDVTEDDILSMIIMGKNPKKQQNYQN" gene complement(1357667..1359004) /locus_tag="SKA53_06952" CDS complement(1357667..1359004) /locus_tag="SKA53_06952" /note="COG4214 ABC-type xylose transport system, permease component" /codon_start=1 /transl_table=11 /product="xylose transport permease protein xylH" /db_xref="CDD:13466" /translation="MTDTTEASDASAETKSGQQDLGLIGKFLKGTEIDTRLLGMFGAL ALIWFGFHIYGAVFNGFGAMLTPRNLWNLSVQTSSIGIMATGMVLVIVTRHIDLSVGA LLGVTGMTMGIVQVEILPQYLGLGHPLIWIVTATIGILMGMTIGAFHGWLIAYRGIPA FIVTLGGLLVWRGAAFLANNGKTISPVDSTFQLLGGGPYGTIGATGSWVVGIIVCIAI VWMMVSSRRSRQRHGFAQRPIWGELTVGGTSCALVIGSVLLVNSYPWPRGIVNQYAAA NNITVPPEGLFISHGFAIPVLILVVVGILMTILVKRTRFGRNVFAIGGNPEAAELAGI NVKWMTMRIFMLMGSLAGLAAVVASARLNSATNALGLLDELYVIAAAVIGGTSLAGGI GTIYGAILGALVMQSLQSGMVLIGFDTSVQQIVVGSVLVLAVYLDNLYRKNVK" gene complement(1359167..1360219) /locus_tag="SKA53_06957" CDS complement(1359167..1360219) /locus_tag="SKA53_06957" /note="COG4213 ABC-type xylose transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC sugar (xylose) transporter, periplasmic binding protein" /db_xref="CDD:13465" /translation="MGAHHWEENMHKSILVAAIAVVGFNSAALAEGMRVGVSWASFQE ERWKIDEAAMVAAIEANGNTYVSADAQSSAAKQLTDIEALMSQGVDVLIINAWDKDAI GPAIDAAANEGIPVIGYDRLIEDDRTFYLTFDNVGVGRIIAQSVLDVQPEGNYAIIKG DPGDPNAGFLLQGMMEVIGDSVNSGAITIVGEAFSDAWKPESAQRNMEQILTANNNNV DAVLSQNDGMAGGVVAALSAQGLVIPVGGQDGDLAAINRVARGLQTVSVWKDARALGA AAGQIASDLASGTAMAAIDGAGVFSNGEKGIPVNAILLDPTPLTRDNLNVAIDAGHIS KAQACEGAIAGVAGCE" gene 1360402..1361667 /locus_tag="SKA53_06962" CDS 1360402..1361667 /locus_tag="SKA53_06962" /note="COG1940 Transcriptional regulator/sugar kinase" /codon_start=1 /transl_table=11 /product="xylose operon repressor" /db_xref="CDD:11648" /translation="MYDVISSQSDESPAPAGCGPLLPATHGESKPLRQQIFEHVRAEG RAARTDVTRALGISAGSATTLTADLITAGLLREVEGLTRELGRGRPPVALEVVPEGRY VIGIKLSDEVHSAVLTDFAGQMLADASLATLPTRKSMDAILEEIDALMDLVLKAAGKS LSDISAVGVGLSGLVDHSSGMVAWSPLLSGRDTDFQTAFVGRFGVPLLVDNDSNVLTL AELWFGAGRSMSDFAVVTIEHGVGMGLVLDNRLFRGSRGMGLELGHTKVQLDGALCRC GQRGCLEAYLADYALAREAATALHRNPRNQQSAHAMLDALFSQAKSGNEAARTIFRRA GRYLSVGLSNVIQLFDPELIILSGERMQYDYLYADEVIAEMQKLTLTSGRAPCRIETH AWGDLVWARGATALALAAVTDAALGEARA" gene 1361664..1363145 /locus_tag="SKA53_06967" CDS 1361664..1363145 /locus_tag="SKA53_06967" /codon_start=1 /transl_table=11 /product="FG-GAP repeat domain protein" /translation="MIRFVVLCLMAMPATAQPVFENRSDALPAHVYGGGWEHFVGGGV AVFDCNGDTLPDIFAAGGENPASLFINAGDFRFQPVSLPDMSGVTGAYPVDINADGHM DLFVLRVGQNQVLLGSGACGFETGFPLPADDAWSTAFSAWWEDDSYPVMAVGNYVDRA NPDGPFQACDANQILRPSPQGSYQSTALTPGFCPLSILAARDARKRSTLRISNDRQYY VRGGYEQMWDIEDQRFLGPEDNWKQVSLWGMGIASRDLTGDGRDEVMLTSMGDQLMQV AQPDGTYANAPFSIGTYAHRPHTGDDGRPSTGWHAEFADVDNDGRADLFIAKGNVDQM PGLAMADPNNLLMQQPDGTFVEAAQTAGVATTARSRGAALADFDGDGRLDLIVVNRRA PLEIYRNVTTDTGNWLTVALTQSGGNRHAIGAVVTVVTDATTQSQQNTIGGGHAGGKA LPLHFGLGDADSATVTVTWPDGAQSTHQVQANAPLTFGHPRDS" gene complement(1363116..1364429) /locus_tag="SKA53_06972" CDS complement(1363116..1364429) /locus_tag="SKA53_06972" /note="COG1858 Cytochrome c peroxidase" /codon_start=1 /transl_table=11 /product="methylamine utilization protein MauG, putative" /db_xref="CDD:11568" /translation="MRLVLGFAVMAGSAAAQDVPPPLTDTDFKPVDLIEAELGQLLFY DPILSGNRDVSCATCHHPAFGTSDGLSLGMGDGGMGLGPNRVADAANMPEQRIPRNSP ALFNLGAHEFSVLFADGRIEVDPARPGGLRTPLADDMVVGFASLLSAQTMFPVLSADE MAGHYSENDVAQAVRRGMITGQGGAWDIIAKRVADIPAYGDAFIAVYDHIDSPDQIGF TDISNAVAAFMELEWRSDNAPFDAVLRGEATLPEPAATGMALFYGEAGCVSCHAGPFL TDHQFHAMGVPQIGPGKAERFESHASDLGRFRVTGDPADMYAFRTPSLRNVAQTGPYG HSGAYADLRDFLVAHLDPVAALQVYDLDRALLPDLPVDDSRGLADSAAIAAAVTVAPV TVDDAAVDALLAFLDSLTDPDAQAGVLGIPDAVPSGLTVARMPEG" gene complement(1364489..1365769) /locus_tag="SKA53_06977" CDS complement(1364489..1365769) /locus_tag="SKA53_06977" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14082" /translation="MPPIADHPLRYTMANELHARPFPAVGAPSRAAYLAIKPASNAAG RDRAADRAHLIDLLDRFGAQHPQPDATHYFGTIGKHQLKWESHTEFVTYTVFGDGVAA RPFEAATFDVFPDDWLSKAPGTRVTSALIRIEVVDGDDGIVEKAKDWFVPESLAISRV VENDLVIAGDFRIDTAGHMRFAVFARPHVDDRRIGRVVQRLCEIETYKAMSMLALSKA RSLGPKMAEFDQILTSLLEDMRLPMADAAKVLQSLLQVSAEIENTIAQTTFRFGAAGA YETIVNQRISILREERFAGRQTFGEFMMRRFDPAMRTVKSTEARLYAMSERALRAGDL LRTRVDVERSAQNQELLTSMDKRADLQLRLQRTVEGLSVVAISYYAVNLALYMAAPLE AAFGITKPVMTAVATPIVLLLVWTLVSRIRKRME" gene 1365913..1366464 /locus_tag="SKA53_06982" CDS 1365913..1366464 /locus_tag="SKA53_06982" /note="COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases" /codon_start=1 /transl_table=11 /product="RNA pseudouridine synthase family protein" /db_xref="CDD:28680" /translation="MSRILLLNKPYGVLSQFTDARSPSPRPTLSGFVTVPGVYPAGRL DRDSEGLLVLTDDGALQARIADPRHKLPKTYLVQVEGAPTDADLALLRHGVTLNDGPT RPAQVQRIAPPALWERDPPVRFRKSVPDQWIEITIHEGRNRQVRRMTAHIGFPTLRLV RWQIGDWTLDGLAPGAWRDSALR" gene complement(1366551..1366634) /locus_tag="SKA53_t07226" tRNA complement(1366551..1366634) /locus_tag="SKA53_t07226" /product="tRNA-Leu" gene 1366742..1367386 /gene="lipB" /locus_tag="SKA53_06987" CDS 1366742..1367386 /gene="lipB" /locus_tag="SKA53_06987" /note="COG0321 Lipoate-protein ligase B" /codon_start=1 /transl_table=11 /product="lipoyltransferase" /db_xref="CDD:10195" /translation="MVEWIITEGLTAYDDALAFMEARVNAIIAGEAAECIWLLEHPPL YTAGTSAKAADLIAPDRFPVHDARRGGEYTYHGPGQRVVYVMLDVGKRGHDLRRFVQD LENWVIGTLDAFNIKGEIRPGRVGVWVQRPDKPRNADGALAEDKIAAIGIRMRKWVSF HGLAINVDPDLSHFDGIVPCGIRDHGVTSLVDLGLPVSMADLDVALRQRFADVM" gene 1367563..1369221 /locus_tag="SKA53_06992" CDS 1367563..1369221 /locus_tag="SKA53_06992" /note="COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, aa3-type, subunit I" /db_xref="CDD:28667" /translation="MADAAIHGDAHQDNRSAFTRWFMSTNHKDIGILYLFTAGVLGFI SVAFTVYMRLELMYPGVQYMCLEGFMTDPCTPNGHLWNVLITYHGVLMMFFVVIPALF GGFGNYFMPLQIGAPDMAFPRLNNLSFWMFVAGGAMGVASMLAPGGNGQLGSGVGWVM YPPLSTNEAGMSMDLAIFAVHLSGASSILGAINIITTFLNMRAPGMTLHKVPLFAWSI FVTAWMILLALPVLAGAITMLLTDRNFGTTFFQPEGGGDPVLYQHILWFFGHPEVYII IIPGFGIISHVIATFSRKPIFGYLPMVYAMVAIAVLGFVVWAHHMYTVGMSLTQQSYF MLATMVIAVPTGVKIFSWIATMWGGSIEFKTPMLWAFGFLFLFTVGGVTGIVLSQAAV DRVYHDTYYVVAHFHYVMSLGAVFAIFAGIYFYLPKMSGRMYPEWAGKLHFWAMFIGA NLTFFPQHFLGRQGMPRRYIDYPDAFALWNLVSSWGAFLSFASFVFFIGVIAWTLLRG RVVTENNPWNEYADTLEWTLPCPPPEHTFETLPKREDWDKQHAH" gene 1369371..1369871 /locus_tag="SKA53_06997" CDS 1369371..1369871 /locus_tag="SKA53_06997" /note="COG5488 Integral membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14572" /translation="MPYQWTPDQPDRQTDWQLSLWPYRSLLRKDFVLFMGATAALVAL PLISLLGTVVVWALLPFFGLMFWGLWTAINISYKRGEVLEELAVDDTTAHLIRHNPKG EKLEWHANRYWVTVHLHPKGGPVENYITLRGGDREVEIGAFLDVSERLALYGDLKRAL RSDQAT" gene complement(1369935..1370396) /locus_tag="SKA53_07002" CDS complement(1369935..1370396) /locus_tag="SKA53_07002" /note="COG1610 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="GatB/YqeY domain protein" /db_xref="CDD:11323" /translation="MQLRDRITTALTDAMRAKEADRLSTLRLINAAIKDRDIAMRGTA DEAAGLSDADVLAIMGRMVKQRQESARAYEEGGRLELAEKELAEIKVIEEFLPRQLSL SEAESAVDAAIAAVGATSIRDMGKVMAELKTKYTGQMDFAKAGPMVKSRLG" gene 1370568..1371716 /locus_tag="SKA53_07007" CDS 1370568..1371716 /locus_tag="SKA53_07007" /EC_number="6.3.5.5" /note="COG0505 Carbamoylphosphate synthase small subunit" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase small subunit" /db_xref="CDD:10376" /translation="MTQKPTACLALADGTIFYGMGFGAVGETVAELCFNTAMTGYQEI MTDPSYAGQIITFTFPHIGNTGVNTDDDETADPVAAGMVVKWDPTEASNWRATGELKS WLAARNRIGMGGVDTRRLTRAIRQQGAPHVALAHHPDGVFDLEKLVAKARAFAGLEGL DLAKDVTCAQSYHWNEMRWAWPEGHQPQTQARHKVVAVDFGAKRNILRCLASAGCDVT VLPASASAEDVLALNPDGVFLSNGPGDPAATGVYAVPMIQGVLATDIPVFGICLGHQM LALALGARTIKMNHGHHGANHPVKDMQTGKVEITSMNHGFTVDSQTLPAGVIETHVSL FDGSNCGIRLDGRPVFSVQYHPEASPGPQDSYYLFERFAEAMDTRAAR" gene 1371782..1373683 /locus_tag="SKA53_07012" CDS 1371782..1373683 /locus_tag="SKA53_07012" /note="COG1215 Glycosyltransferases, probably involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="Glycosyl transferase, family 2" /db_xref="CDD:10933" /translation="MLDFITDSAVAARLTDTDVALLQSLLARHLLDQGQADRAAAAAL RLDVPLSDILLRDYNLPSRTIARYLAKAHGAQVVDPTRRPADATLIARWGARDCLRRG VLPWRAAQGTVTVLTTCPTRFAAARPDLEQVFGRIRMAITTEAKLTDAIATLHGPIFA ADAETCVPATESCRTWDAARAARLALAMAVAIMACAVLDLGALIIAVTLWAMVVLIAT TLLKAAAVIIGMRARAHDPRPVAEADLPVITMLIPLYRETAIASHLLVRLAALRYPRA LLDVCLVLEQDDATTRATLARTQLPGWIRAIIVPPGQVKTKPRALNYALPFARGSIIG VWDAEDAPAPDQLHVVARHFAAAGAHVACLQGVLDYYNAGTNWLTRCFTIEYAAWFRV VLPGLARLGLVVPLGGTTLFFRRSVLETLGAWDAHNVTEDADLGLRLARRGYVTALIP TLTMEEANGRAWPWVKQRARWLKGYAITYGVHMRSPVRLLRDLGLWQFIGVQVLFLGT LSLFALMPLFWSLWLIPLGVAHPLHGWLSAGAFWAMTYAFIAAEALALLVNLVGLHKA GRLRLWGWALTLPAYFPLGTLAAYRGLAELATRPFYWDKTAHGVVLTGLKPPANLPPR PLPHPVSAA" gene complement(1373637..1374290) /locus_tag="SKA53_07017" CDS complement(1373637..1374290) /locus_tag="SKA53_07017" /note="COG1802 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, GntR family" /db_xref="CDD:11512" /translation="MQDPRHAQKDAYALILEAIDSHLYKPGDRLVESELAERFGVSRT PIREALQRLETQSLLTRDGRSLIVASLDHSQLSELYVVRGELEGLAARLAARHAAPEE VRVLQDMLEADKRLINDPSALSRANRRFHKQIHLASHNRYLVQQLDLVHRSMALLATT SLAAEGRGAQTLEEHAAIVAAIAAGDGDAAYKALRDHISAAFVTRLKLDAAKVEAAD" gene 1374391..1375038 /locus_tag="SKA53_07022" CDS 1374391..1375038 /locus_tag="SKA53_07022" /note="COG1011 Predicted hydrolase (HAD superfamily)" /codon_start=1 /transl_table=11 /product="pyrimidine 5'-nucleotidase" /db_xref="CDD:10740" /translation="MVAQHFAHVDTWVFDLDNTLYHPSAGLFAQMDVRFAAYVMRITG LDQARALRLAHDYWISHGSTLAGLMAEHHIDPDDFLADVHDIDITHLAPDPLLGAAIA GLQGRKVVYTNGSENHAKRVLAARGLTRHFDAVYGVEHANYRPKPTAEAFAAIFTRDG ITPTKAAMFEDEARNLAVPHDVGMRTVHVHETPESALHIHHGAPDLAAFLSQLAR" gene 1375077..1376267 /locus_tag="SKA53_07027" CDS 1375077..1376267 /locus_tag="SKA53_07027" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="2-octaprenyl-6-methoxyphenyl hydroxylase" /db_xref="CDD:10524" /translation="MERKETDILIAGGGVAGLVAAAAFGTAGFSVVIVDPTPPVTDAD SDGADLRTTAFLQPAQAFLETAGIWPHLADYATPLQIMRIVDAAASPHVMRDFDASDI SDQPFGWNLPNWLLRREIVARLQDLPNVDFRPGISFGNMVPRLNAALVNLTDGTQVAA SLVIGADGRNSAVRRALGISATTTRYGQKAMTFAVTHDAPHDNISTEIHRAGGPFTLV PLPDHAGLPCSAVVWMDHGAQTLRRAALDATDFEAEANDRSAWHYGPLKLASKRMVWP IISQIADQITGPRTALVAEAAHVMPPIGAQGLNMSLRDLACLLDLATADPASLGSPAM LDSYARQRHPDIKLRVAGIDALNKASMLGNSVAQDLRARGIAALYGITPVRRTLMQLG LGAR" gene complement(1376264..1377397) /locus_tag="SKA53_07032" CDS complement(1376264..1377397) /locus_tag="SKA53_07032" /note="COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase" /codon_start=1 /transl_table=11 /product="aminotransferase family protein" /db_xref="CDD:9950" /translation="MAMDGAARGVDPDGLMEFSVVFTDRSLNHMSKTFQGVMTDISAM LKEVYAADHVAIVPGGGTYGMEAVARQFGSGAHAFVLRNGWFSYRWSQIFDAGQFTAQ TTVMKARQAGNDSRAPFAPAPIADVVAAIRDARPDVVFAPHVETSAGIILPDDYLTAL ADVAHEVGAIMVLDCIASGCVWVDMKATGVDVLISAPQKGWSSTPSAGLVMLSQRAAD RMAATTSNSFAVDLKKWHAIMQAYENGGHAYHATMPTDGLRAFRDTMLETRQYGFDKL KAAQWELGNAVRRVLADKGLRSVAADGFAAPGVVVSYTDDPAIQNGSKFMAEGMQIAA GVPLQCDEPADFRTFRLGLFGLDKLYDVQGTLARLIPVLDRVL" gene complement(1377512..1377964) /locus_tag="SKA53_07037" CDS complement(1377512..1377964) /locus_tag="SKA53_07037" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family" /db_xref="CDD:11236" /translation="MTLDDLDRMILRALSVNADQSTTQLATKLGLSQPATWRRIKRLQ EAGVIAGRRLQLDAAKAGFGVTVFLGVKLATKGRVSLEDFERAVGAVPEVQTVDHVLG LYDYRLRVVARDLADFERVLRRRLMTLPGVGNVEANVLLSEERRPGPL" gene complement(1377961..1378416) /locus_tag="SKA53_07042" CDS complement(1377961..1378416) /locus_tag="SKA53_07042" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family" /db_xref="CDD:11236" /translation="MLDELDRRLLRLLQADPSRGVPDLAEAVSSTPARVTRRLDQLRA AGVLLGSRIVIDWRALGYAVAVSLRITLDKTQSRAFDDFLAAARQVPEVIEIQTFLGR VDVRLSLIARDLADYQRIYREQVLELPHIADIEALMTVATVKGDESLPL" gene 1378545..1379567 /locus_tag="SKA53_07047" CDS 1378545..1379567 /locus_tag="SKA53_07047" /EC_number="1.1.1.86" /note="COG0059 Ketol-acid reductoisomerase" /codon_start=1 /transl_table=11 /product="ketol-acid reductoisomerase" /db_xref="CDD:9934" /translation="MRVYYDRDCDVNLIKDKKVAILGYGSQGHAHALNLRDSGAKNLV VALREGSPSAKKAEGEGLKVMGIAEAAAWCDVIMFTMPDELQAETYKKYVHDNLKEGS AIAFAHGLNVHFGLIEPKAGVDVIMMAPKGPGHTVRGEYTKGGGVPCLVAVHQDATGK AMEIGLSYCSAIGGGRSGIIETNFRQECETDLFGEQAVLCGGLVELIRMGFETLVEAG YEPEMAYFECLHEVKLIVDLIYEGGIANMNYSISNTAEYGEYVSGPRILPYEETKKRM KEVLTDIQTGKFVRDFMQENSVGQPYFKATRRINDEHQIEKVGEKLRAMMPWISAGRM VDKDKN" gene 1379658..1380581 /locus_tag="SKA53_07052" CDS 1379658..1380581 /locus_tag="SKA53_07052" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:25647" /translation="MPQQPTPLNWISIALLGLIWGATFMVVATALEGYGPLTVACART TLGAGAMLALMVVLRRPLPDFTPQMRAYLLAIGIFNTAVPFALLSWGQQYVPSAFAGI SMAALPLFVLPLAHLFSDEKLRLRSALGVVIGFCGAVVLIGPGVLRIGTGWEPLGQLA CLAAAMSYAVSSVMTRRCPPIDPITMTALLLSVGAAALIPAMLIVEGIPGAAAPRPML AIVFLGVIPTALAAVLRVATIRSAGAVFMTLVNYQVPVWSMLFGVLVLNEVLPLRFFA ALALILLGLAISQWAGLKRLFAAARASGGDT" gene complement(1380630..1381973) /locus_tag="SKA53_07057" CDS complement(1380630..1381973) /locus_tag="SKA53_07057" /note="COG1109 Phosphomannomutase" /codon_start=1 /transl_table=11 /product="Phosphoglucomutase/phosphomannomutase" /db_xref="CDD:10831" /translation="MTRKFFGTDGVRGTANIYPMTADMALRIGAAAGRYFRNDGSNGH RVVIGKDTRLSGYMFENALTAGLTSTGMNVLLLGPVPTPAVGLLTTSMRADVGIMISA SHNPHHDNGIKFFGPDGFKLSDAAEEQIEALIASDVEPAKAANIGRAKRIDDGRFRYA ERLKATFPAGMRLDGLKVVVDCANGAAYKVAPEVLWELGATVIKVGVDPDGFNINDGC GSTHPERAAQVIRDTGADVGICLDGDADRVMILDETGAVADGDQIMALMAARWAAVGR LQGDTLVATVMSNLGLERFLDAKGLHLKRTAVGDRYVVEAMRAGGFNLGGEQSGHIVM TDYATTGDGLLAGLQFLAAMIDTGHKASVLARNFDTVPQMLKNVRFTAGTDPLATKRV AASIADAEIKLNGKGRLLIRKSGTEPLIRVMAECEDDTLLAQVVDQIIAEVAAAS" gene complement(1381970..1382977) /locus_tag="SKA53_07062" CDS complement(1381970..1382977) /locus_tag="SKA53_07062" /note="COG0294 Dihydropteroate synthase and related enzymes" /codon_start=1 /transl_table=11 /product="Dihydropteroate synthase, DHPS" /db_xref="CDD:16565" /translation="MTLYYRPLVVAEPASDTLPLAGGACLFRDVAVLERGQPSHVIPA RDVPATILAHLTAPRAPVAGLAMDRPRIMGILNVTPDSFSDGGDHADLVSATARALAM QAEGAEIIDIGGESTRPGAVTVANAAEISRTAPVIAAIRAQSAIAISIDTRKADVAKA AIAAGASLVNDVAAFSHDPALAQVTADAGLPVCLMHAQGDPATMQNDPRYDDVLLDVY DFLAARIAQAEAAGIARTAIIIDPGIGFGKTQDHNLTLLRNVSLFHALGCPILLGASR KRFIGTIGGGQDAKDRMAGSVAVALHGLSQGVQILRVHDTFATKQALALWSAINGTDS R" gene complement(1382974..1383894) /locus_tag="SKA53_07067" CDS complement(1382974..1383894) /locus_tag="SKA53_07067" /note="COG1539 Dihydroneopterin aldolase" /codon_start=1 /transl_table=11 /product="dihydroneopterin aldolase, putative" /db_xref="CDD:11253" /translation="MTDDIRLAFAHPSERAEASTTTPCDRISLRDYIVSVEIGAFQQE RGTLQRVRFNVVVEVPRLSGPIDDDVDRILSYDRVTEAIGIELHAERLNLLETLAARV ADRILLEPQAHRVFVRIEKLDRGPFALGVEIVRARDGQTPGGQAHIPVPHPRVVFLSN AAIASPLLGGWIDQLAAMPAPVIICVGAGETSAPQVPNRLAQRRIDLLAIEQNAWRLA VRDARCVVVQTRTELDWAMKNGQVSVWAPSKIVLDAVDGPSASPADAAALIAWFAGQM QAAELVFVGHAAPVTDIALRVLPVDQAVLA" gene complement(1383993..1384676) /locus_tag="SKA53_07072" CDS complement(1383993..1384676) /locus_tag="SKA53_07072" /note="COG3773 Cell wall hydrolyses involved in spore germination" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13093" /translation="MTPLKKIAAAFVVAQLAFGGVYASADTDSADTDMASRLAGLLGE ERSALSVLSEARMAQLTSLPPASERGIPTAPVVIYDTDFLDSLPVASGDAQWECLAEA LYFEARGESVRGQFAVGEVILNRVESAAYPQSLCGVVKQGTGRKYACQFSYNCDGNPE VINEQVAWERVGKIASVLLAGMPRDLTGGATHFHTRAVNPSWSRSFTRTTTIGAHHFY REPVRTAAN" gene complement(1384860..1387412) /locus_tag="SKA53_07077" CDS complement(1384860..1387412) /locus_tag="SKA53_07077" /EC_number="2.7.9.1" /note="COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase" /codon_start=1 /transl_table=11 /product="pyruvate phosphate dikinase" /db_xref="CDD:10444" /translation="MQQQIKQDRVTLITPTAPVSVAAHGGRAKCLQRLIRLAMPVPVT VALSFDAVRDAALGNLPDMAALMAPFDPQPLLSVRPSSESADWGGPSAILNVGMNDAR FVSMSQVMGEAAAARLYLRFVQSYAVHVARLDPDEFHLPDIADASALRVMLAAYEAET DEPFPQDPAVQLAEVLRSMARAWDGTSARLLRQAKGAPVDAGLGLVVQAMALGLGQGE CGTGTVQFVDSTTGAPRITGRYVAQNVPQMDKTDAEGALYLTRDPRGASLQDRCPQTF AQLLDCGALCRQHLREEMQVKFTIDAGKLYILDAVRVQRSSRASVRIAVALAEDGVIT RQDAVLRVEPVALSELLHRQVDPSAPRNVLVTGIAASPGAASGRIVLTANEAQASAAR GEACVLVRRETTPEDIRGMHAASAVLTMRGGITSHAAVIGRGLGVPCVVGASDLLIDR KSGRVVAPDGRTFAAGDIITVDGTTGQVLAGAPPMLEASLDGAFQTLLEWADTFRDIG VRANADTPADAQTARNFAAEGIGLCRTEHMFFEGDRLGVMREMIFAESSKDRRAVLDR LLPMQRADFAELFSIMEGRSVCVRLFDPPLHEFLPSDKAGMRDLAEQLALPLPEVAER VAALSEYNPMLGMRGVRLGIAIPEIYDMQAQAIFEAMVAVGAKGIAPAVDIMIPLVSA MREVELMKSRIESVANLVAGRARATLNYRLGVMVETPRAALRAQDIAAHAEFLSFGTN DLTQMTYGLSRDDAGRFMSTYVQQGVYAEDPFHTLDIEGVGELVAMGAERGRRGRPDV VLSICGEHGGSRSAIAFCRDHKFDYVSCSPFRVPGARLMAAQLALKDKITKA" gene complement(1387492..1389666) /gene="glyS" /locus_tag="SKA53_07082" CDS complement(1387492..1389666) /gene="glyS" /locus_tag="SKA53_07082" /EC_number="6.1.1.14" /note="COG0751 Glycyl-tRNA synthetase, beta subunit" /codon_start=1 /transl_table=11 /product="glycyl-tRNA synthetase beta subunit" /db_xref="CDD:10619" /translation="MPDLLIELFSEEIPARMQARAADDLRKLVTDGLVEAGLTYAGAA AFATPRRLTLAIDGLTAESTIFREEKKGPPIDANPRALKGYLQGLGMEAPDKWYDEQI EALKAGEVISFGDSFVTTQELKGKRVLMAVLEYPPRKAADIIAEVLDATVRNFPWPKS MRWGTGALKWVRPLQSIICLLSDEAGAEVVPLTIDAITAGRSTRGHRFLSPDAFTVNG FDDYEAKLKRAHVILRADERAEVIWNDATQQAFASGLELVEDRGLLAEVAGLVEWPVV LLGRIDDAFLGLPPEVLQTSMKEHQKFFSVRNPKTGRIERFVTVANMATADHGATILA GNQKVLAARLSDAKFFWENDLRTVKADGLEGMGAGLANVTFHNKLGSQADRIARIAAL AREIAPHVGADPDLAEQAAIVAKADLQSEMVGEFPELQGLMGRYYATAAGLNPAVAAA CQDHYSPLGPSDAVPTAPVSVAVALADKIDTLTGFWAIDEKPTGSKDPFALRRAALGV IRLVLENGARINLRDIRVSAEMRIPDEFKSGETVPDDAGANYDSLLAFFHDRLKVYLK DQGIRHDIIDACIAMPNNDDLTLLVKRARALADVLATDDGENLIQGFKRANNILTQAE AKDGVEYSYGADLKFAEDGAEKALFAALDAADAKIAPAMKDEDFSTAMTAMAALRGPI DAFFTAVQVNDDRQVIRRNRLNLLSRIRKICLSVADLTKIEG" gene complement(1389666..1390187) /locus_tag="SKA53_07087" CDS complement(1389666..1390187) /locus_tag="SKA53_07087" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MARILIVGMLVVAAVFGGAMYYLQVYAYYEDVVAAQGDITLTAT DSSAPITLPFSDFTGIDAVSSPLRYRACLSTDIDTATLATAVPLPFAEPRIAPRWFDC FDARQIGADLQDGLATAYLGTANLQYGIDRVIAVYPDGRAYIWHEINACGEAVFNRYP APDTCPPAPESLQ" gene complement(1390187..1391107) /gene="glyQ" /locus_tag="SKA53_07092" CDS complement(1390187..1391107) /gene="glyQ" /locus_tag="SKA53_07092" /EC_number="6.1.1.14" /note="COG0752 Glycyl-tRNA synthetase, alpha subunit" /codon_start=1 /transl_table=11 /product="glycyl-tRNA synthetase alpha subunit" /db_xref="CDD:27665" /translation="MSDKPRSFQEIILRLQSYWAAKGCAILQPYDIEVGAGTFHPATT LRALGSKPWAAAYVQPSRRPTDGRYGENPNRLQHYYQYQVLIKPSPPDLQELYLGSLA AIGIDAHLHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVSQFTYFQQVGGHDCRPVSG ELTYGLERLAMYVLGVDHVMDMPFNDPDAPIALRYGDIFCQTEQEYARWNFDVADTDM LLQHFKDAEAECHRILSTPAHDPKKDMAIIMAHPAYDQCIKASHLFNLLDARGVISVT ERQAYIGRVRALAKACADAFMQTEAAGASA" gene complement(1391164..1392660) /locus_tag="SKA53_07097" CDS complement(1391164..1392660) /locus_tag="SKA53_07097" /note="COG0168 Trk-type K+ transport systems, membrane components" /codon_start=1 /transl_table=11 /product="Trk system potassium uptake protein TrkH" /db_xref="CDD:10043" /translation="MAPVLDSGAGAVQRCGMFDLRPVGYVIGLLIASLGVTMLVPLAA DLLAGDRHWFVFFESAIVTILTGGLLALACANGVTAGLSLRQTFLLTSLVWLTLPLFG AIPFILGATEASLTDAFFEAMSALTTTGATTFTQLETLPAGLLLWRGLLQWLGGIGII VVAMVFLPELRVGGMQIFRSEAFETMGKILPRAGQIASQISVIYLVLTMACGLIYAAL GMTPFDAFVHALTTVSTGGMATTDTSFGAFNAGIHYTAVVFMILAALPFVRYVQLLAG TAVPLWRDSQIRVFFALLGLFIMLMTAWLWAREGAWTELAFREAMFNIVSIMSGTGYA SADYMTWGTFPVVAFFFIGLIGGCAGSTACSVKVFRYQILFAAIKSQVRQIHSPHGVF APRFEGRPIGDDVINSVIAFFVAFVSLLGIITVLLGLTGLDFITSLSGAATAIANIGP GLGSEIGPAGNFANINDPAKWILAIAMFIGRLEVMVVLTIISVRFWRN" gene 1392694..1393896 /locus_tag="SKA53_07102" CDS 1392694..1393896 /locus_tag="SKA53_07102" /note="COG0415 Deoxyribodipyrimidine photolyase" /codon_start=1 /transl_table=11 /product="DNA photolyase-like protein" /db_xref="CDD:10289" /translation="MFTPTYTDAVTRLAAFTPHAGRDYAAMRNHDDIAHVSALSPYIR HRIITEADVLRAVLARHSPQAAEKFVQEVFWRTYWKGWLELRPTVWANYQRDLAAAMN QIQTQAGLRAQWETACLGQTGIDGFDHWARQLADTGYLHNHARMWFASIWIHTLKLPW VLGADFFLRHLLDGDAASNTLSWRWVGGIQTQGKAYLAQPDNIAKYTQGRFRPEGLAQ VAAALPCPPHPDRGPMPVSAIIDPAKPTGLIVTEDDLSPGWLLDKVAPVATAFVQTTD RRSPLQVAPMVTDFVAAAMRDCHTRFADRLGRVSVISADALPDWRKAEGLDQVVLAHP PAGPTADALRHIDALRVLRAYDLDAWPHATHGFFRFKDAIPKLLGGIKGWRCCDRSAL RSPLAGIA" gene 1394001..1394465 /locus_tag="SKA53_07107" CDS 1394001..1394465 /locus_tag="SKA53_07107" /note="COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /codon_start=1 /transl_table=11 /product="isoquinoline 1-oxidoreductase, alpha subunit" /db_xref="CDD:11788" /translation="MAISVTINGTAHSVDLPDNVPLLWVLRDAIGLTGTKFGCGIAAC GACTVQIDGVAVRSCQVALADVWGEVTTIEGLGQPDNLAVIQQAWIDHQVAQCGYCQS GQIMNAAALLAETPTPTDDDIDAAMQGNLCRCGTYPRIRAAIKDAAQRLTEV" gene 1394468..1396702 /locus_tag="SKA53_07112" CDS 1394468..1396702 /locus_tag="SKA53_07112" /note="COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /codon_start=1 /transl_table=11 /product="isoquinoline 1-oxidoreductase, beta subunit, putative" /db_xref="CDD:11243" /translation="MASLRKIARRTFLIGSAAIAGGVAFGVYQLRKDAPNPLVAGAGE AVLTPFVLLNQDGVTVIAPRAEMGQGVQTTLAALVAEEMDVAWEDITVLHGPPAQAYY NQALLGLALPFRHYADTDFRHSLRQGIGQIGKLLHLQVTGGSTSIKDGYERMRHAGAS AREALKLAAAAQLGVAASDLRTQDSHVIAPDGTRIAYTALAEAVRDIDLPDVELRPRS EWKYLGKSMPRVDMRAKATGTAQFAGDVQLEGMQFATVRINPKRAGMVSYDDTVARTM DGVATVIDLGDGIAVVASNTWLAMQAAQAVDIVWQDAAYPADTAGMMAAIAAAFETEP NSTVRDDGDVNAAIEGTEIVAEYTVPFLAHATMEPMNATALFTGDRLEIWTGNQAPVI TRDKCAAVAGIAPEAVTVHTTLMGGGFGRRAETDYSVQAARIATALPGTPIRMTWTRE EDMRHDFYRPAAMARFRGVVADGAAQLIDGQIAAPSVFQQSSFRQMGQVPPGPDRAHV EGAADQPYDVPHFRITGHLADLAVPVGFWRSVAASFNGFFLDTFIDEMAHAAGTDPLQ FRLALAEREHAPSAGVIRAVGEMCGWTGETPANIGRGVAFCHSFGTATAQVVEVEDTG RGIRINHCWIACDPGIALDPAIIEAQMISGAIYGLSAAMQEEVTFTDGAADQGNFTDY DALRMHTAPRFDVRILETSAHLGGIGEPGTPPAMPALGNALFDLTGVRARELPLIKTF DLIL" gene complement(1396706..1397416) /locus_tag="SKA53_07117" CDS complement(1396706..1397416) /locus_tag="SKA53_07117" /note="COG3822 ABC-type sugar transport system, auxiliary component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27492" /translation="MTHDPACMKRSRINAIMAEADQMIRSHGFTLPPWAYWSPDQFKA RASDARAVIDARCGWDITDYGAGRYDQMGLFLFTLRNGRLADLRRGGGMCYAEKLLIS KQDQLSPMHTHVIKAEDIINRGGATLVVELYGSDPDGAFDETVGGVVRCDGITRAFAP ADKLRLAPGESVTLMPGDWHAFWGEGGDVLIGEVSTVNDDETDNIFREPIGRFAQIEE DVAPTHLLVSDYRDWLAI" gene complement(1397413..1398180) /locus_tag="SKA53_07122" CDS complement(1397413..1398180) /locus_tag="SKA53_07122" /note="COG2071 Predicted glutamine amidotransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11779" /translation="MRRPVIGIIGNSYLINDEYPAHAAGTMNAQALAEVSGCQPLIVP SHPGLVCIDTLLDICDGFVFPGARANVHPEEYGEQETPAHGTFDRDRDRLTLPLIRAC VARGQPILGICRGFQEVNVAMGGTLFPEIRDLPGRDNHRMPPDGSLEEKFALRHTVTF RPGGVFHKLMGAPSVMTNTLHGQGIKQAGPRVIVDGHAPDGTPEAIYIADAPGFTMSV QWHPEWNADADPVSRPLFTAFGDACRDWAAGALRKVS" gene complement(1398321..1398749) /locus_tag="SKA53_07127" CDS complement(1398321..1398749) /locus_tag="SKA53_07127" /note="COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12531" /translation="MSDISITKARMIIRKALATGRELGLKPLSVVVLDAGGHVKAFER EDGASPGRFGIAHGKAYGSVMLGMAGKAQMARAESQAYFMAAINGVYGGQVVPVPGGV LLRDKKGGVIGAVGVTGDTSDNDVIAAMAGIEAAGLIGEA" gene complement(1398778..1400925) /locus_tag="SKA53_07132" CDS complement(1398778..1400925) /locus_tag="SKA53_07132" /EC_number="2.3.3.9" /note="COG2225 Malate synthase" /codon_start=1 /transl_table=11 /product="malate synthase" /db_xref="CDD:11932" /translation="MTDRVTKHGLQVANELASFIDTSALPGTGISPDAFWAGFAGLLA KMTPRNRALLQKRDDLQSAIDAWHVAQRGKPHDRVAYEHFLKDIGYLVPEGDDFEIDT ANVDPEIATIPGPQLVVPITNARFALNAANARWGSLYDAFYGTDAMGTLPPAGGYDRG HGARVVARVRVFLDEAFPIEGKSHADVARYHVQDGQLLVDDAPLRDPAKFVGYRGNAK APDAVVLVNNGLHVELVFDRAHPIGSRDQALLADVRLESAVSAIMDCEDSVACVDAED KVLAYGNWLGLMKGDLSAEMVKNGKTMTRKLAADREYTTATGGKVTLKGRALLWIRNV GHLMTNPAILDADGAEVFEGLMDAMITTLIALHDLKHEGGNSARGSVYVVKPKMHGPE EVAFTNDIFAAVEDALGLPRNTVKIGIMDEERRTTVNLKECIRAAKSRVAFINTGFLD RTGDEIHTSMEAGPFSRKDFIKRKQWIGAYEDQNVDIGLECGFSGRAQIGKGMWAMPD LMAAMLEQKIGHPQSGANCAWVPSPTAATLHALHYHKIDVMAVQARLRKGGRRAYVSS ILDIPLAQYQRWTDAQKMREVENNAQGILGYVVRWIDQGVGCSKVPDINNVALMEDRA TCRISSQALANWLHHDVVGRDQVMAAMQKMARVVDDQNAGDPAYRPMAPDFSGIAFQA ACDLVFLGREQPSGYTEPVLHRRRLELKAQRNH" gene complement(1401025..1401159) /locus_tag="SKA53_07137" CDS complement(1401025..1401159) /locus_tag="SKA53_07137" /note="COG4338 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13585" /translation="MRKKSDLPQKTCATCGRPFTWRKKWAKVWDAVRYCSDKCRGTRN " gene 1401047..1401181 /locus_tag="SKA53_07142" CDS 1401047..1401181 /locus_tag="SKA53_07142" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSEQYRTASQTFAHFLRQVKGLPQVAQVFWGRSDFLRILAMAAS " gene 1401336..1402211 /locus_tag="SKA53_07147" CDS 1401336..1402211 /locus_tag="SKA53_07147" /note="COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase" /codon_start=1 /transl_table=11 /product="Phospholipid/glycerol acyltransferase" /db_xref="CDD:12514" /translation="MEERITPLIAERAPWLYADRPGTAYVRRALHTMLGYEKTLKIAR NLEHADPAQIMRDMADRLALMVSSRGFGHLPVHGPALIVANHPTGIADGIILNHLIAR SRPDAYFFANRDILRVFPQMDSMIAPVEWRKPLRSHAKTRETMAFVRQATEAGRLGVI FPSGRLAKRRWLSLHERPWMASAAMLARKFDLPVIPVNIQARNSALFYLFDRIHPTLR DITLFHETLNKDRQPFVVTMGEPISAAAIPRDPEQGIALLRAATLALGGEHAPVVNLI ATTRPWLSKGAPSAS" gene 1402316..1403836 /locus_tag="SKA53_07152" CDS 1402316..1403836 /locus_tag="SKA53_07152" /EC_number="6.3.5.-" /note="COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)" /codon_start=1 /transl_table=11 /product="aspartyl/glutamyl-tRNA amidotransferase subunit B" /db_xref="CDD:9939" /translation="MPAMLDLTYDAPTPKVISGATGDWELVIGLEVHAQVATNAKLFS GASTLFGAEPNSNVAFVDAGMPGMLPVINEACVAQAVRTGLGLKAQINLTSAFDRKNY FYPDLPQGYQISQLYHPIVGEGEVLVEMGNGTARLVRIERIHLEQDAGKSIHDMDPTM SFVDLNRTGVALMEIVSRPDIRGPEEAAAYVLKLRQIMRYLGTCDGNMQNGNLRADVN VSVCRPGDYERYQATQDFSHLGTRCEIKNMNSMRFIQMAIDFEARRQIALLEDGKSVT QETRLYDPDRNETRSMRSKEEAHDYRYFPDPDLLPLEIEQAWVDDIAAHLPELPDTKK ARFIADYGLSDYDASVLTAEGENAAFFEKAAEGRDGKLAANWVINELFGRLKKDDRDI ADSPISAQRLGQIIGLIKSDTISGKIAKDVFDIAYTQDRDPEEIVATEGMTQVTDTGA IEEAVDAIIAANPDQVEKAKANPKLAGWFVGQVMKATGGKANPAAVNQIVAARLGL" gene 1403866..1404258 /locus_tag="SKA53_07157" CDS 1403866..1404258 /locus_tag="SKA53_07157" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVRQVGPRENAMTYEYKVVPAPLRGTKAPGVKTNEDRFALSLET VMNDLAADGWEYLRADTLPCDQREGLMSRTTVYQNMLVFRRTKVANTAPKMKQQRAVP TMTAPAPQVPKKPVTPDTRTAPDVAGGD" gene complement(1404259..1404477) /locus_tag="SKA53_07162" CDS complement(1404259..1404477) /locus_tag="SKA53_07162" /note="COG0271 Stress-induced morphogen (activity unknown)" /codon_start=1 /transl_table=11 /product="stress induced morphogen, BolA" /db_xref="CDD:2252" /translation="MTLDPQMLDVINESHKHAGHAGDDGSGESHWRVVIKAAALDDMS RIARHRAIHTAIGPDLMGRIHALAIDLR" gene 1404589..1405224 /locus_tag="SKA53_07167" CDS 1404589..1405224 /locus_tag="SKA53_07167" /note="COG2214 DnaJ-class molecular chaperone" /codon_start=1 /transl_table=11 /product="DnaJ domain protein" /db_xref="CDD:24391" /translation="MKKDDPFGFDMSVSGSKKKNPRGRRGMSGASETSTRVCDHDGCE LAAPFRAPKSPDVLDDYFWFCQEHVREYNLKWNFFDTTSEAELAALMDKDRVWDRPTK PFKRSVEERAWARLGVDDPHQVLGANATRNPGRGAAVGRKLPPTERRAIDILDAKDNW SKPQIRKAYKSLIKVLHPDMNGGDRSQEEQLSEVVWAWDQIKVSRNFRDTD" gene 1405345..1406331 /locus_tag="SKA53_07172" CDS 1405345..1406331 /locus_tag="SKA53_07172" /note="COG0714 MoxR-like ATPases" /codon_start=1 /transl_table=11 /product="cobalt chelatase, CobS subunit" /db_xref="CDD:25255" /translation="MADGTTDMHAKPTEDISVRDVFGIDSDMKIKGFADRTDRVPEID TTYKFDPDTTLAILAGFGYNRRVMIQGYHGTGKSTHIEQVAARLNWPAVRVNLDSHIS RIDLIGKDAIKLRDGVQVTEFHEGILPWALRNPVAIVFDEYDAGRADVMFVIQRVLET DGKLTLMDQNEIITPNPYFRLFATANTVGLGDTTGLYHGTQQINQAQMDRWSMVVTLN YLSHDAEAAIVLSKSPHYNNEKGRRTISQMVTVADLTRTAFMNGDLSTVMSPRTVLAW AENARIFSNVGYAFRLSFLNKCDELERQTVAEFYQRCFDEELPESAASLSLR" gene complement(1406378..1406962) /locus_tag="SKA53_07177" CDS complement(1406378..1406962) /locus_tag="SKA53_07177" /note="COG0431 Predicted flavoprotein" /codon_start=1 /transl_table=11 /product="probable reductase" /db_xref="CDD:26057" /translation="MTTKPKIALIIGSTRATRFADKPAAWMLKQAQARDDMDVELVDL RDFDLPLFDEMASNLWMPSSDARAVKWQQKIGEFDGYIFVVAEYNRSITGALKNALDQ AYNEWNRKPMSAIAYGSVGGTRALEHLRNIAVELQMVPTRNAVHIGGGDFFGVHPLGA NAEIDTIADHLMPSVNATLDDIVWWANATKAARG" gene 1406998..1408989 /locus_tag="SKA53_07182" CDS 1406998..1408989 /locus_tag="SKA53_07182" /note="COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase)" /codon_start=1 /transl_table=11 /product="cobalt chelatase, pCobT subunit" /db_xref="CDD:26483" /translation="MRQATLSGYKRHGAGPVQKYAGRAAPLAPALIRWFIFRMQKPSD NPADPFKKALAEATKVMANDPELSVTFSVDPSGQTADSMRLPQVSRRMTRDEVLLARG TADSFALRHRFHDTATAARYMPQGQMARDLYDAMETARIEAVGAQYMPGTAGNIDAKI GNDARRKGYDQITQAADAPLPIAAGYLIRHLATGRALPAGADNVMQLWRGFIEDHCGG TLENLSATLNDQKEFARFARQLIADLGYGDQLGDDPDQLDDDQDDAAEDGGDDQNEPD STGDDEGDSEEAEASPEQSQQSQQDAKQAQVSMDDQADAEMGEEVDMPEGEAPMDPPQ PAPVSDADPDYKVAYTAFDEEIGAQDLAEPVELDRLRAYLDQQLDPLKGAVSRLANKL QRRLQAQQNRSWEFDREEGILDAGRLARVVASPTTPLSFKVEKDTEFRDTVVTLLLDN SGSMRGRPISIAAICADVMARTLERCDVKVEILGFTTKAWKGGQSREKWLADGRPATP GRLNDLRHIIYKSADAPWRRTRPNLGLMMKEGLLKENIDGEALEWAHRRITARHEQRK VLMVISDGAPVDDSTLSVNPANYLEKHLRDVIAMIEKRRAVELIAIGIGHDVTRYYER AVTITDVEQLAGAMTEQLASLFDNDPRKRARVLGMRRVG" gene 1409052..1410830 /locus_tag="SKA53_07187" CDS 1409052..1410830 /locus_tag="SKA53_07187" /note="COG0006 Xaa-Pro aminopeptidase" /codon_start=1 /transl_table=11 /product="aminopeptidase P" /db_xref="CDD:28141" /translation="MFQSFKAQSNPDQGPARLNDLRAEMLAAGVDAFVVPRADAHQGE YVAARDARLRWLTGFSGSAGFCVVLQDRAGVFIDGRYRVQVLAEVADCYAPVHWPEVQ LADWLKEARPAGGVLGYDPWLHSVDEIAKLRAALPAFDLRAGDNLVDRIWQDQPAPPA APFAVQPLDLAGEDHAAKRARLAAALGADACVLTLPDSIAWLLNIRGNDIPRNPVPQG FAILYRNGAVSLFAGAGKADGIADHLGPDVSLRDVADFLPELQGLTGTVQIDPKTCPD LVASMLAVARQVHAPDPCILPKACKNATEIAGARAAHDRDAVAMVRFLAWLDTTAPTG GLSEIDVVRALEAFRRETNALCDISFETICGSGPNAAIVHYRVSEASNRPLGQDALLL VDSGGQYQDGTTDITRTIAIGTPTATHSTCYTRVLQGMIAISRIRFPRGVGGQHLDAL ARAPLWLAGMDYDHGTGHGVGSYLSVHEGPQGISRRSEVALHEGMILSNEPGYYRAGD FGIRIENLIVTCKAPPLQGGDGRDMLAFETLTHVPFERRLIDVDLLSDAERDWIDRYH ADTLTSIGPRVDQATYEWLVAACAPL" gene 1410874..1411215 /locus_tag="SKA53_07192" CDS 1410874..1411215 /locus_tag="SKA53_07192" /note="COG2343 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9807" /translation="MPDHITIRPATGTWVVRAGGAVLGESTQALELTEGDYPPVIYFP RADIAMAFLEPSDTTSTCPHKGGATYYGIAAKSGLIADAVWSYEDPKPAVAEIKGYLA FYKSKVTVEEI" gene complement(1411212..1412882) /locus_tag="SKA53_07197" CDS complement(1411212..1412882) /locus_tag="SKA53_07197" /note="COG0038 Chloride channel protein EriC" /codon_start=1 /transl_table=11 /product="voltage-gated chloride channel family protein" /db_xref="CDD:9913" /translation="MRAAVRSTLQKGAAYLRRARFDALQVMKTHGPTQIQFWFIALVI GIAAAGAAVLFRLGISVIQSAVYGTEDVVMLQTLAASLAWYHVLVVPICGGLIVGVIL HRFTDDGRVRSVADVIEGAALSRGRVEVRRGLASAAASLITLSTGGSSGREGPVVHLA AVLSTIVCRWIKANGITGRDLLGCAVAAAVSASFNAPIAGALFALEVVLRHFAVHAFA PIVIASVVGTIINRTVFGDVAEFVLPVQNALAFYVELPAFLLLGLVCGLVAVVLMKSI FWADDFANFVQNLTRLPRYLRPAVAGAMLGGLAIWFPHIIGVGYETTTAALTGSLLLH EAIVLVALKVLAVAITIGGRMGGGVFSPSLMIGALTGLAFGLIATAVFPNVSGEGSLY ALAGMGAVAAAVLGAPISTTLIVFELTGDWQTGLAVMVAVSLSTALASRLVDRSFFLT QLERRGVHLAAGPQAYLLATIPVIAHLRPAPDDGCKSLIQQGLFLDRKATLEQAMPLF DRSGAAFLPIVFLDKGSDTPTVLGVLYQLDALRAMNRALSDTAAEEHS" gene complement(1412992..1414614) /locus_tag="SKA53_07202" CDS complement(1412992..1414614) /locus_tag="SKA53_07202" /note="COG0497 ATPase involved in DNA repair" /codon_start=1 /transl_table=11 /product="DNA repair protein RecN" /db_xref="CDD:10368" /translation="MLIIDRLELAFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRAE LVRQGAEQGEVTAWFDLSTDHPARAILQDAGLEVEDELILRRINTRDGRKTAWVNDRR VSGDVLRALSDTLVELHGQHDDRGLLNPRGHRQMLDAFAGAEGELATTQAAWRALSAA RKALAAAEAKVAETRAEEDYLRHAVAELDALSPEAGEEATLDAQRRLMQSAEKIRTDI VRAHEALGLQGAEGLVNDASRWLQGAADKAEGQLDPALTAIEAMMLSLDDAQRAIETC LDALTFDPFALEQAEERLFAIRGLARKHDVLPDDLRGFADDLRGRLAVLDGSSGDLQA LAAQVQGAQAAYDAAAANLRAKRQGAARKLDLAMAAELAPLKMERAVFTTEITDADSG PDGGDAVAFTVATNPGAPTGPINKIASGGELSRFLLALKVCLTQEADGLTMIFDEIDR GVGGATADAVGRRLAELAQGGQVLVVTHSPQVAALGGHHWRVEKHQRADATLSTVVRL DAAARIDEIARMLSGDTVTDAAREAAKALIKA" gene complement(1414678..1415463) /locus_tag="SKA53_07207" CDS complement(1414678..1415463) /locus_tag="SKA53_07207" /note="COG4105 DNA uptake lipoprotein" /codon_start=1 /transl_table=11 /product="competence lipoprotein ComL, putative" /db_xref="CDD:13387" /translation="MLLVACSGAGSNVAMEDLSAQQIFELGERQIEAGNADDAAFTFG EIERLYHYSEFAQRALIMQAFAYHRDGDYPNSRAAAQRFVDFYPAEQDAPYAAYLLAL SYYDQISDIGRDQGLTFEALQALRRVIETYPDSEYAAASVAKFDLAFDQLAAKEMEVG RYYLKRANYAAAANRFRTVVEDFQTTTHTPEALHRLVEAYLSLGLTDEAQTAGAILGY NYQSSDWYAASFALLTGRGLAAEAAGDNWLASIYRQVIRGEWL" gene complement(1415644..1416561) /locus_tag="SKA53_07212" CDS complement(1415644..1416561) /locus_tag="SKA53_07212" /note="COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase" /codon_start=1 /transl_table=11 /product="putative UDP-3-O-acyl N-acetylglucosamine deacetylase" /db_xref="CDD:24687" /translation="MQNSVKSPIVFEGVGLHTGVPARVVLRPASAGAGIAFRRVDLAG MPVIAALWQNVIVSPLNTRLANADGVSVSTIEHLMAALAGCGVHNALIDIDAAEVPIL DGSAAAFVRGIVATGLQTDTAPLQAIEILRDVTVTQGEATATLSPATTLQIDFAIDFV DAAIGRQHKTLNMANGAFVRELCDSRTFCRSADVDAMRAQGLALGGSIDNAVVVDGDK ILTPGGLRHTDEAVRHKMLDALGDLYTAGAPILGRYTGSRAGHAMTNLLLRALFAQPD AWRMVRCDSNIAARLPGVGVSQADLVAVA" gene complement(1416770..1418344) /locus_tag="SKA53_07217" CDS complement(1416770..1418344) /locus_tag="SKA53_07217" /note="COG0206 Cell division GTPase" /codon_start=1 /transl_table=11 /product="cell division protein FtsZ" /db_xref="CDD:28357" /translation="MTLNLSLPGHDELKPRITVFGVGGAGGNAVNNMIEKQLDGVEFV VANTDAQALQQSRATSKIQMGLKVTEGLGAGARASVGAAAAEESIEQIVDHLAGAHMC FITAGMGGGTGTGAAPIIAQAARELGVLTVGVVTKPFQFEGGKRMRQADEGIEALQKV VDTLIIIPNQNLFRLANENTTFTEAFALADDVLYQGVKGVTDLMVRPGLINLDFADVR AVMDEMGKAMMGTGEAEGENRAIQAAEKAIANPLLDEISLEGARGVLINITGGYDLTL FELDEAANKIREKVDPEANIIVGSTLDTSMEGRMRVSVVATGIDAKAKRAEDATPRRS MSAPLPQAHQAPAPVAAAPVPVAAEHVAAQADARLEPSLFEDLETDHAPIMAPRHEAP VAQSRADDLPPPAYTPRPEPTLSDADAFVAPRAPAPGTPSPEALARLQAAVNRVPKPA DQQQRPAPRAAEAEKPRFGINSLINRMTGAQADASPAQQPARTQPQVTALRPEQEAED DQDRIEIPAFLRRQAN" gene complement(<1419154..1420077) /locus_tag="SKA53_07226" CDS complement(<1419154..1420077) /locus_tag="SKA53_07226" /note="COG0849 Actin-like ATPase involved in cell division" /codon_start=1 /transl_table=11 /product="cell division protein FtsA" /db_xref="CDD:10715" /translation="MGDLYDSQRAMRQMRKAAMQRGVVAVLDVGTSKIACLVLRFDGP ERVRSVDGVGSMAGQSQFRVIGAATTRSRGVRYGEVDAMQETERAIRTAVQAAQKMAN VRVDHVIACLSGARPRSYGLAGELDVSGGTVTEQDISQVMANCDVPDYGTGREVLHAQ PVNFALDNRSGLADPRGQIGNKLTTDMHMLTVDAAAVQNIFYCIKRCDLELAGLASSA YVSGMSTLVEDEQELGAACVDLGGGSAGISVFMKKHMIYADSVRMGGDNVTSDISMGL QIPATTAERIKTFYGGVVATGMDDREMIEIGG" gene complement(1420077..1420967) /locus_tag="SKA53_07231" CDS complement(1420077..1420967) /locus_tag="SKA53_07231" /note="COG1589 Cell division septal protein" /codon_start=1 /transl_table=11 /product="cell division septal protein FtsQ" /db_xref="CDD:11302" /translation="MRSLIRRRAMADVPHDPAPTKWGYRYQRLMLTPGVRAAMRIGLP VLLVSIIAGAWFAKPENRAMLEAQIAQAVRGFQERPQFMVQSVTVTGADDVILPAITA ILPKDYPQSSFDLDLLAIRARIESLDAVRSASVRVGPGGVLQVAVTPRDPVALWRDGP VLRLIDTEGVQSGTLVSRGNRPDLPLIAGNGAERHIQEALDLYARAGPLRDRVRGLVW MGERRWDIVLDRNQRILLPSDGPVAAFDRVIALDLAQDMLERDVTIVDMRNADRPTLR MNEDAAAALRRVTTPTGTGN" gene complement(1420955..1421947) /locus_tag="SKA53_07236" CDS complement(1420955..1421947) /locus_tag="SKA53_07236" /note="COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes" /codon_start=1 /transl_table=11 /product="D-alanine--D-alanine ligase" /db_xref="CDD:10899" /translation="MVAKTGAPKGAKPMTGRKRPAQKAVGMSSRANPKVVVLMGGPSA EREVSLSTGRECAAALRAAECDVIEVDAGPDLATRLTQIAPDAVFNALHGRWGEDGAV QGLLEWLRIPYTHSGILASALTLDKERTKDIYRAVGLPVVDSILADADDVRARHVMPP PYVVKPYNEGSSVGIYIVQDAANGPPQLSADMPARVMVETYAPGRELTTTVMGDRALT VTDIITDGWYDYHAKYAPGGSRHVVPAEIPAQIFDACMDYALRAHRALGCRGISRTDF RWDESRGLDGLILLETNTQPGMTPTSLAPEQAAKVGISFPQLCRWLVEDASCDR" gene complement(1421947..1422885) /locus_tag="SKA53_07241" CDS complement(1421947..1422885) /locus_tag="SKA53_07241" /note="COG0812 UDP-N-acetylmuramate dehydrogenase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylenolpyruvoylglucosamine reductase/dehydrogenase" /db_xref="CDD:10679" /translation="MDPMIQNLPPVRGTLTAERPLADLTWMRVGGLAEMLFQPADAED LAAFLAALDPSVPVFPMGVGSNLIVRDGGIPGVVVRLGRGFNSITIDGGMVTAGAAAL DGHVARRAADAGLDLTFLRTIPGSIGGAVRMNAGCYGSYVADVLTSVRVVLRDGTLHD LPAADLHLGYRHSSLPEGAIILAATFAPPAGDPATLAARMDDQLAKRDATQPTKDRTA GSTFRNPAGFSSTGRADDTHELKAWAVIDAAGLRGATLGGAVMNVKHPNFLTNAGGAS AADLEDLGELVRKKVYDSQGITLEWEIMRVGLRHAD" gene complement(1422931..1423221) /locus_tag="SKA53_07246" CDS complement(1422931..1423221) /locus_tag="SKA53_07246" /EC_number="6.3.2.8" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate--L-alanine ligase" /translation="MGGLWIIAGMTFCALVPFVVQVRLARAGKFGPVLSVLAVLGAVA VILLYATAKPFGIHPVQAMAILLLAVVPAGLGGGAGALLGKLLRNRDDRRSR" gene complement(1423281..1424696) /locus_tag="SKA53_07251" CDS complement(1423281..1424696) /locus_tag="SKA53_07251" /note="COG0773 UDP-N-acetylmuramate-alanine ligase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramate--alanine ligase" /db_xref="CDD:10641" /translation="MDGTPVMNAATKLPLDVGPIHFVGIGGIGMSGIAEVLLNHGYRV QGSDLKATKITDRLKSLGAVIFEGQRAENLAGAEVVVISSAIKPGNPELDAARATGLP VVRRADMLAELMRLKSNVAVAGTHGKTTTTTMVAALLDEGGIDPTVINGGIIHAYGSN ARMGQGEWMVVEADESDGTFNRLPATIAIVTNIDPEHMEHWGTIENLRKGFYDFVSNI PFYGLAVCCTDHPEVQALVGRITDRRVVTFGFNAQADVRAINLTYKAGVAHFDIALQS EDQVIAGCSLPMPGDHNVSNALAAVAVARHLGLKKDEIRAALAGFGGVNRRFTKVAEV NGVTIIDDYGHHPVEIAAVLRAARQATTGRVIAVHQPHRFSRLSHHFDEFCACFNDAD VVGISEVYAAGEDPIAGASHADLVAGLIRHGHRHARIVNSEDDLERLVREQAKPGDMV VCLGAGTISTWANGLPARLQG" gene complement(1424696..1425793) /gene="murG" /locus_tag="SKA53_07256" CDS complement(1424696..1425793) /gene="murG" /locus_tag="SKA53_07256" /EC_number="2.4.1.227" /note="COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase" /codon_start=1 /transl_table=11 /product="N-acetylglucosaminyl transferase" /db_xref="CDD:10576" /translation="MKAPLLIIAAGGTGGHMFPAQALAEAMLARGWRVKLSTDARGAR YTSGFPDAVEVSTVGSATFARGGLAQKLAVPFRIAAGIVAAKWRMLRDRPAVVVGFGG YPAIPAMTAAWALRVPRMIHEQNGVLGRVNQLFAQRVDQVACGTWPTVLPAGLTGIHT GNPVRASVLDRAGAPYIPPGDYPMALLVLGGSQGARIMSDVVPAAIAALPDPLRANIR VSHQARAEDMDRVATFYAEAGISADVQTFFTDIPARMSEAQLVISRSGASTVADVSVI GRPAIWVPFAAALRDEQTANAQQLVDAGAALLMTEGQFNAPNLTMALQNLLSDDAMAA DMARKAVACSVPDATDRLVQLVENLAEARKK" gene complement(1425790..1426959) /locus_tag="SKA53_07261" CDS complement(1425790..1426959) /locus_tag="SKA53_07261" /note="COG0772 Bacterial cell division membrane protein" /codon_start=1 /transl_table=11 /product="cell division protein FtsW" /db_xref="CDD:4442" /translation="MTEMVYGAVPVQSGDAVLPRWWRTIDKWTLSCVLVLFGIGLLLG FAASPPLAAKNGLEPFHYVMRQTVFGGTAIAVMIAVSMMSPVMVRRLAVLGLFGAFVS LLLLPVFGTDFGKGATRWYSLGFASVQPSEFLKPGFIVMTAWLLAASTQLGGPPGKLY SFVLTMMVALLLAFQPDFGQAALIMFAWGVMYFVAGAPMTLLIVLAVAVFFAGTLFYA NSEHFARRIDGFLSPDVDPTTQLGFATNAIREGGFFGVGVGEGQVKWSLPDAHTDFII AVAAEEYGLVCVMVIIALYATIVVGSLLRLMKERDPFIRLAGTGLACIFGAQAMINMG VAVRLLPAKGMTLPFVSYGGSSLIAGGIAIGMLLAFTRSRPQGEIGDILMRRANR" gene 1427053..1428279 /locus_tag="SKA53_07266" CDS 1427053..1428279 /locus_tag="SKA53_07266" /note="COG2081 Predicted flavoproteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11789" /translation="MHPTAIRATSLCMKVQTLIIGAGAAGMMCAAHAGPGVLVVDHAR AAGEKIRISGGGRCNFTNLHTAADNFISQNRHFAKSALGRYTQWDFIALVDAHRIPWH EKTLGQLFCDTSAKDVIAMLRAEMVRARAELWLDTQLGEIGHDGTDFTVTLTRNGRDQ AVTARNLVVASGGKSIPKMGATGLGYQIAARFGLPLVTPRPGLVPLTFSDERFKPLAG VATPARVTAGGAGFDEALLFTHRGLSGPAVLQASSYWDEGDPISVNLTPGTDLLGALQ GHRHSDPRKALTTILSLYLPARLVDYLAEGLTLTGTMADQSDARLATICAALADWQVT PSGSEGYRTAEVTLGGVDTDALSSQTMAAKAVPGLYFIGECVDVTGWLGGYNFQWAWS SGWAAGQAIRQGQGGS" gene complement(1428309..1429721) /locus_tag="SKA53_07271" CDS complement(1428309..1429721) /locus_tag="SKA53_07271" /note="COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanine--D-glutamate ligase" /db_xref="CDD:10639" /translation="MIPVRGYDGAIVAVLGMGLSGRAAAQALQAGGAHVVVWDDGQAG RDLAQTAGYALRDLTKAVSYDGVAALIVSPGIAHLYPAPHPAIAAAWAAGVPVDNDIG LFFRSFATDDWDGFETTPRVVAVTGSNGKSTTSALIHHILAESGRPAQLAGNIGRGVL DIAPARDGEVVVLELSSYQTDLARALTPDVAVLTNLSPDHLDRHAGHGGYFAAKRRLF AEGGPDRAVIGVDENEGRYLANQLAQGVGDDRVVLVSSGQKLTEAAWSVFARKGFLSE YRHGRQVGSIDLRAIAGLPGAHNHQNACAAYAVCRTLGLGPRAIEAAMQSYPGLPHRS QLVADRGGVRFVNDSKATNVDSAAKALQAFARIRWICGGLQKEGGLDGLLPHLAQVAK AYVIGREAADFARQLPGVPTEVCTTMARAVALAAAEAEPGDVVLLAPAAASFDQYDNF EQRGADFITCVGAAVAGQSD" gene complement(1429726..1430808) /locus_tag="SKA53_07276" CDS complement(1429726..1430808) /locus_tag="SKA53_07276" /note="COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase" /codon_start=1 /transl_table=11 /product="phospho-N-acetylmuramoyl-pentapeptide- transferase" /db_xref="CDD:10345" /translation="MFYWLTALSDGGDVFNLFRYITFRAGGAFLTALVFGFIFGRPLI NVLRRKQGKGQPIRSDGPEGHFAKAGTPTMGGLLIVGALTFSTLLWARLDNPFVWMVL FVTLSFAAIGFADDYAKVSKQTTSGVSGKVRILLGITIAAIAAYWAAQYHPDDLTNRL AVPIFKDTLINLGILFVPFAVIVIVGSANAVNLTDGLDGLAIMPVMIAAGTFGVIAYA VGRVDFTQYLDVHYVPDTGELLILTMGLIGGGLGFLWYNAPPAAVFMGDTGSLALGGA LGAIAVATKHEIVLSIVGGLFVVEALSVIIQVLYYKRTGKRVFLMAPIHHHYEKQGWS EPQIVIRFWIIALILAMVGLATLKVR" gene complement(1430821..1432251) /locus_tag="SKA53_07281" CDS complement(1430821..1432251) /locus_tag="SKA53_07281" /note="COG0770 UDP-N-acetylmuramyl pentapeptide synthase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase" /db_xref="CDD:10638" /translation="MTALWTAHQAVAATQGVTQGDWVATGVSIDTRTLQPGDLFVALK DVRDGHDFVAMALEKGAAAALVSHRPDGVASDAPLLVVPDVLKGLEALGIAARARSTA RIAAITGSVGKTSTKEMLRTVLSRQGKCHAAEASYNNHWGVPLTLARMPADADFAVIE IGMSNPGEIAPLSRMARPHVAMVTTVAAAHLASFESLAGIAAEKATIVDGLEPGGIAV LNGDVATTAILQDRAGDIGAQIVLFGETAGAWRISDLRISRDVTVIGATSPGHDYLFK LSVPGRHFGLNAVGVLAVVAALGADPVAASLDLALWVPPAGRGTREIIQLDLANEFET IDLMDDAFNANPTSLAASLEVIAAGQPQDGVGRIVKGRKIAILGDMLELGTDEVAMHA AMAQNPHLQQLDLIHCAGPLMRHLWEALPQGKRGQWAATAAELAAQATRLVDTGDVVL VKGSKGSKVSLVVDAIRKLGHRRGDE" gene complement(1432248..1433726) /gene="murE" /locus_tag="SKA53_07286" CDS complement(1432248..1433726) /gene="murE" /locus_tag="SKA53_07286" /EC_number="6.3.2.13" /note="COG0769 UDP-N-acetylmuramyl tripeptide synthase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase" /db_xref="CDD:10637" /translation="MTTLTALGLTAAQGRDATITSLAVDSRDVIKGSLFAALPGAKVH GAEFIQYALRMGAAAVLTDAAGARIAADVLAASDAAVIVAEDPRQTLAQTASLWFGAH PGIVVAVTGTNGKTSVSSFCRQIWEEMGLAGVNLGTTGVEGAWAYPLKHTTPEPITLH RVLAEAAGHGITHVAMEASSHGLDQRRLDGVVLAAAGFTNFTQDHLDYHGTFESYFAA KMGLFTRVLAEDGVAVVNLDDPKGPVVAAICTQRGQEVIGVGRSDDARLRLTGQRFDA TGQDLLFTWQGRPHHARLALIGGFQAENVLLAAGLVIAAGADPLDVFAALSQLGTVRG RMELAATRANGAAVFVDYAHTPDAVETALKALRPHVMGRIVAIIGAGGDRDSTKRPLM GAAAAEFADSVIVTDDNPRSEDPASIRAAVLAGAQGCDSLSEVADRAEAILRGIDMLQ PGDALLIAGKGHESGQIIGDTIMPFDDVEQASVAVAALEGRI" gene complement(1433738..1435519) /locus_tag="SKA53_07291" CDS complement(1433738..1435519) /locus_tag="SKA53_07291" /note="COG0768 Cell division protein FtsI/penicillin-binding protein 2" /codon_start=1 /transl_table=11 /product="Cell division protein FtsI/penicillin-binding protein 2" /db_xref="CDD:10636" /translation="MRTPLRPLARILKARETGENPDMIEAENRARRHAATQDKARSRA EGRLLLLGLMFFCAFVVIGGRMGTLASSVPEEPRAAAEGNPIIGQRADIVDRNGRLLA TNLDTFSLYAHPRQMVDPARTAAQLAAIFPEMDADRLLTDFTGERRFLWLRRQMSPEQ MQAVHDIGSPGLLFGPREMRLYPNGSLAAHILGGTRYGREGVSSAEVIGVAGVERQFD PFLRDPANEGAPLQLSIDLSIQAATERVLAGGMALMNAKGATAVLMNIHSGEIIAMAS LPDFDPNSRPQVAITGDQSDSPLFNRAVQGVYELGSVFKIFAVAQAMELGLVDADTMV DTTSPLTWGRFRIRDFRNYGAQNSVTKVIVKSSNVGTARIAMQIGAERQRDFLGQLGL LQATPVELIEAPTGAPLLPSNWSEISTMTISYGHGLSSSPLHLAAAYAAMVNGGTKVA PTLLRNPDPQPGPRVISAAVSQSVVDMLRATVTEGTASMGDVAGYAVGGKTGTADKPR AAGGGYYDDKVIATFASVFPASDPQYVLITTLDEPVETSGTEPRRTAGWTAVPVAAEI IRRTAPLLGLRPQMDMGDPDSIVLTAN" gene complement(1435519..1435878) /locus_tag="SKA53_07296" CDS complement(1435519..1435878) /locus_tag="SKA53_07296" /note="COG5462 Predicted secreted (periplasmic) protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14546" /translation="MRGFLYVFAALAVIASGFWAYQENYTTQAAVREVRGLYTEIGAA HDRLQMLRAEWAYLNRPDRLADLADLNFDRLGLLSLQPEAFGHVDQIIYPIPPIQPIT DPIEISNDTLDLGEDPL" gene complement(1435878..1436858) /locus_tag="SKA53_07301" CDS complement(1435878..1436858) /locus_tag="SKA53_07301" /note="COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis" /codon_start=1 /transl_table=11 /product="S-adenosyl-methyltransferase MraW" /db_xref="CDD:23269" /translation="MSAAADQTPHIPVLIRPLIAAVGPVTGVWLDGTFGNGGYTRALL AAGAHKVIAVDRDPLAFQMAAGWVADYGDRIVMQEGVFSQLDTYAQDLDGVVLDLGVS SMQLDLAERGFSFMRDGPLDMRMSQSGLSAADLCNDAEEAELADIIYLYGEERASRRI AKAIVAARPLTTTGQLAKIVESCLPRAKPNQSHPATRTFQALRIAVNNEYGELAMGLM AAERALKPGGQLAVVTFHSVEDRMAKRFLQARSGNNANANRYAPETTQVTPAFRIDKR KAIGPDEQELAENPRSRSAKLRVAIRTDAPAQSLDPADLGMPMMRKKGGR" gene complement(1436866..1437360) /locus_tag="SKA53_07306" CDS complement(1436866..1437360) /locus_tag="SKA53_07306" /note="COG2001 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="MraZ, putative" /db_xref="CDD:11709" /translation="MELNFTGEHTQKVDSKGRMSIPADFRRVLESGDPEWTPDRTPRM YLLYGDHLKNQLQGYSVAEFGKVVDQINALPRGSERKQILSRLIIGQSIKLDVDKDGR TVMPIKQRQKLGITDGELTFSGLGDHFEIWKADRYDSDVSSTLTAYLADKPEGYDPLI LLDG" gene 1437667..1437879 /locus_tag="SKA53_07311" CDS 1437667..1437879 /locus_tag="SKA53_07311" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MELDGQTVIIHGNHFAAFWTNYAQMLRTARNGTLYKAVSGVLRM MQRNRSSATFGISFADHCSPSFTQTS" gene complement(1437926..1438414) /locus_tag="SKA53_07316" CDS complement(1437926..1438414) /locus_tag="SKA53_07316" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10329" /translation="MITIRRAVAADFDALWPILRDVFRAGTTYAVDPAISRDAAFAYW MQQPAATYVGVLDGVVVGTYYIRTNQPGGGAHICNCGYIVAPAARGQGLAAQMCLHSQ DQARAMGYLAMQFNFVLASNQGAVQLWHRLGFATIGTIPDAFQHPEQGFVAAHVMYKR LS" gene complement(1438411..1439484) /locus_tag="SKA53_07321" CDS complement(1438411..1439484) /locus_tag="SKA53_07321" /note="COG0489 ATPases involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="Putative Mrp (Multidrug resistance-associated proteins) familyprotein" /db_xref="CDD:10360" /translation="MAVTQENIMTALARITLPDGGDIVGRDMVRALTIDAGKVSFVIE AETPAAATRLDGVRRAAEQVVLALPGVDSVAAILTAHGPAPKPAEPPSLKIGRHPTPQ AGPAKVSGVDRILAIGSGKGGVGKSTVSSNLAVALARQGRRVGLLDADIYGPSQPRMM GVNKRPGSPDGKTIIPLQAHGVTMMSIGLMMDPDKAVVWRGPMLMGALQQMLGQVAWG ELDVLLVDLPPGTGDVQLTLCQKTELTGAIVVSTPQDVALLDARKALDMFNTLNTPIL GLIENMSTYICPSCGHEAHIFGHGGVAAEADKIGVPFLGALPIDLDTRLAGDAGTPIA AGSSPMAEAYATIARRLIAGGMA" gene 1439735..1439950 /locus_tag="SKA53_07326" CDS 1439735..1439950 /locus_tag="SKA53_07326" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTTFNITLPTSIPFSDRLASLRATLSDKMAKRKVFQTTLNELQS LSNRDLADLGLSRSALRGIAFEAAYGK" gene complement(1440355..1440816) /locus_tag="SKA53_07331" CDS complement(1440355..1440816) /locus_tag="SKA53_07331" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family" /db_xref="CDD:11236" /translation="MQYMTTIDKINADILHTLSRDGRISNLQLADQVGLSPSACLRRV QELERSGVIKGYRARLDPAQTGRAYVVYVAVGLSEHTKAAQMGFEAAMQGADQVTECH NVAGAFEYMLRVEVANLPAYKAFHTDILGTVPHVRAITSYMVMGSPKDTRA" gene 1440880..1441479 /locus_tag="SKA53_07336" CDS 1440880..1441479 /locus_tag="SKA53_07336" /note="COG1280 Putative threonine efflux protein" /codon_start=1 /transl_table=11 /product="transporter, LysE family" /db_xref="CDD:10996" /translation="MSYDILIALVGFAFASSVTPGPNNVMLMASGANYGLRRTLPHML GISAGHAFMVFMVGVVLLGVFLTYPALNIVLKVVSAAYMLWLAWKIANAVPPEAKKVT GKPFTFLQAAAFQWVNPKAWFMAITAISAYAPQDRGLVVGSLMVAGVFATTNLPAVTI WAWIGVQLRRWLGTARRLRMFNITMALLLVASLWPMLVG" gene complement(1441476..1443869) /locus_tag="SKA53_07341" CDS complement(1441476..1443869) /locus_tag="SKA53_07341" /note="COG0210 Superfamily I DNA and RNA helicases" /codon_start=1 /transl_table=11 /product="Putative uvrD/DNA Helicase II" /db_xref="CDD:10085" /translation="MSDYSEDDAFEAAAVPLSQRAMARPAMPYLDGLNPAQRQAVETL DGPVLMLAGAGTGKTKALTSRIAHVLATRSARPQEVLAVTFTNKAAREMKHRIAALMG EAVEGLPWLGTFHSVSAKLLRRHAELVGLQSSFTILDTDDQLRLLKQLVVASDIDEKR WPPRMLAGIIDGWKNKALTPDKVPVAESGAFDGKGVDLYAAYQRRLIDLNAVDFGDIL LHMVTIFQKHPDVLRQYQTRFRYILVDEYQDTNVAQYLWLRLLAAGHKNICCVGDDDQ SIYGWRGAEVGNILRFEADFPGAHVVRLEENYRSTPHILAAASGVIAANKGRLGKTLF TSVEEGEKVRLIGHWDGEEEARWIGEEIEASQRGTRGMAPLGLDSMAILVRASHQMRA FEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRLAVSPADDLAFERIVNTPKRGLGD KAIQTIQRTARANRVSLVEGARLVCQGRLLGGKGLKELTELVAGLDRWHAQLRAEADT HVALAEIILDESGYTGFWQNDKTPEAPGRLENLKELVKALENFENLQGFLEHVSLIMD NETEEAGEKVSIMTLHAAKGLEFPSVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAY VGITRAEELCTISFAANRRVYGQWQSQMPSRFIDELPSRDVAVLTPPGLYGGGFGAAG MAASASPAIMGAAGSDLHQKAHDADVYNSPGWRRLQTRSQQRGLGVPSEARNMTIDVT AISAFSVDDRVFHQKFGYGNVLGIEGDKLEIAFDKAGTKHVVARFIVSADAADDVPF" gene 1444009..1445148 /locus_tag="SKA53_07346" CDS 1444009..1445148 /locus_tag="SKA53_07346" /note="COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases" /codon_start=1 /transl_table=11 /product="FMN-dependent alpha-hydroxy acid dehydrogenase family protein" /db_xref="CDD:7893" /translation="MNAHAKYPAISDLKTRARGRIPHFVWEYLDSATGVEATQRRNRT ALDQVLLNPSILHGEFAPDLSTTLLGRDHPLPIGIAPLGMSGLIWPGAEQMLARMAAR ENIPYTLSTVASQLPEDVGPHAGDQGWFQLYPPRDPVIRDDILNRAKSAGFHTLVLTV DVPVASRRERQTRGGLTQPPKLTPRLALQAARCPAWLLGIRQTGMPRLRLMESYSQVK GSLPSNQHIGYLLRTSPDWDYFKALRDAWDGPLVVKGVGRADDAARLTDEGADAIWVS THAGRQFDGGPASIETLPAIRAATPLPVIFDSGIEGGLDVLRALALGADFVMLGRAFH YGLAAMGEAGAAHVLDILRQDMISNMGQLGARSLKDLPACLRQTP" gene 1445208..1448651 /locus_tag="SKA53_07351" CDS 1445208..1448651 /locus_tag="SKA53_07351" /note="COG1038 Pyruvate carboxylase" /codon_start=1 /transl_table=11 /product="pyruvate carboxylase" /db_xref="CDD:10765" /translation="MTEFKKILIANRGEIAIRIMRAANEMGKKTVAVFAEEDKLGLHR FKADEAYRIGEGMGPVAAYLSIDEIIRVAKMSGADAIHPGYGLLSENPDFVDACTSHG ITFIGPKAQTMRQLGDKASARRVAIEAGVPVIPATEVLGDDMDLIRKQAAEVGYPLML KASWGGGGRGMRPIMNEKELEEKVREGRREAEAAFGNGEGYLEKMIMRARHVEVQILG DSHGQIYHLWERDCSVQRRNQKVVERAPAPYLSEVQREHICNLGKKICAHVNYECAGT VEFLMDMDSGDFFFIEVNPRVQVEHTVTEEVTGIDIVRAQILIAEGKSLVEATGCASQ YDVKLDGHALQCRVTTEDPQNNFIPDYGRIQMYRSATGPGIRLDGGTAYSGAVITRYY DSLLTKVTARAPTPEMAIARMDRALREFRIRGVSTNIAFVENLLKHPTFLNNEYHTKF IDETPDLFNFTKRRDRATKILTYIADITVNGHPETAGRARPAADIRLPRPPVKPTSNL TPGTRNILDTQGPIAVAQWMRDQKQVLITDTTMRDGHQSLLATRMRSIDMINAAPAYA AKMHGLFSVECWGGATFDVAYRFLQECPWQRLRDIRAAMPNIMTQMLLRASNGVGYTN YPDNVVQSFVAQAAISGVDVFRVFDSLNWVENMRVAMDAVIDANKVCEGTICYTGDLL DPARSKYDLKYYVAMAKDLESAGAHVLGLKDMAGLLKPAAASILIKALKDEIGLPVHF HTHDTSGAAIATVLAAAAAGVDCIDAAMDSFSGNTSQPTLGSIVEALRGTDRDTGLDI AAIREISNYFEQVRAHYTAFESGLQAPASEVYLHEMPGGQFTNLKAQARSLGLEDRWH EVAQTYADVNQMFGDIVKVTPSSKVVGDMALMMVSQNLTRAQVEDPKVDVSFPDSVID MMRGNLGQPPGGWPMALQKKILKGEAAQTDRPGKALAPVDLAKTKADLQVKFEDVIID DEDLNGYLMYPKVFMDYTARHEIYGPVRTLPTRTFFYGMEPGEEIAAEIDPGKTLEIR MQAVADMNEDGEVKVFFELNGQPRTIRVMNRLAAADKVQRPKAELGNTGHIGAPMPGV VASVAAVAGKQVKAGDLLLTIEAMKMETGIHAERDAVVKAVHVQPGSQIDAKDLLVEL E" gene 1448890..1448961 /locus_tag="SKA53_t08868" tRNA 1448890..1448961 /locus_tag="SKA53_t08868" /product="tRNA-Gly" gene complement(1449032..1449658) /locus_tag="SKA53_07356" CDS complement(1449032..1449658) /locus_tag="SKA53_07356" /EC_number="4.2.1.19" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="imidazoleglycerol-phosphate dehydratase" /translation="MKAMILRADAADAVQTAHILASNGFQTLCVTSRDLAQAMIHAEM IDLMVMDQRVGTQLTHTLALSAERRNPYVSTIIMTDEGREVMDDLYGLIPSLYALIGT QTETALVSQIFLSAVANAAEVARRIDRQLAADAADMGEGEEDLDLIAQDDAACWGAED DAASAAPAAHDSVADGRRSWGDYADVRPHPVLNAPAMPPRDGAIKAFA" gene 1449807..1450394 /locus_tag="SKA53_07361" CDS 1449807..1450394 /locus_tag="SKA53_07361" /note="COG0131 Imidazoleglycerol-phosphate dehydratase" /codon_start=1 /transl_table=11 /product="imidazoleglycerol-phosphate dehydratase" /db_xref="CDD:7625" /translation="MRTATITRKTAETDITVTINLDGSGIYDNATGVGFFDHMLDQLA RHALIDMTIRASGDLHIDDHHTVEDVGIALGQALTQALGDKRGIRRYGSCHLAMDDAQ VRAALDLSGRPYLICNLDLPFGKIGTFDTELVREFFQALSTHGGITLHIDRLHGFNAH HITEAAFKAVARALRDAVETDPRKGDAIPSTKGSL" gene 1450391..1451029 /locus_tag="SKA53_07366" CDS 1450391..1451029 /locus_tag="SKA53_07366" /EC_number="2.4.2.-" /note="COG0118 Glutamine amidotransferase" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisH" /db_xref="CDD:9993" /translation="MTTALVDYDSGNLHSAQKAFERMAAEVGAGPIIVTGDPDVVARA DRIVLPGDGAFPHCRSQLYAQSGLAEAITEAVTRRAVPFFGICVGMQMLATTGHEHAD TPGFGWIAGDIRQITPADPALKVPHMGWNDLVIDTPHPVLDGIATGEHAYFVHSYAMQ VSNPAERLAHVEYGGDVTAIIGRDNIIGTQFHPEKSQHAGLRMIANFLSWRP" gene 1451062..1451532 /locus_tag="SKA53_07371" CDS 1451062..1451532 /locus_tag="SKA53_07371" /note="COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /codon_start=1 /transl_table=11 /product="transglycosylase SLT domain protein" /db_xref="CDD:27995" /translation="MLFGTGAALAACARGGTETASMADTSNIPLHPNETPALRALINR YADIHEIPVTLLHRVIIRESTHNPAARNGPYYGLMQILPATARSMGFRGQPNDLLDAE TNLKFAGRYLRGAWLLSDGDEQTAIRWYARGYYYEAKRRGMLVETGLRPGPTSS" gene complement(1451539..1451928) /locus_tag="SKA53_07376" CDS complement(1451539..1451928) /locus_tag="SKA53_07376" /note="COG4731 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13871" /translation="MKQLILAAAAAFAMAGAVSAQDAAIGTWQTEVDDGAFAYITIAP CGAAVCGIIARTFNADGEYQSENLGRQLVIDMVPTGAASYQGQVWRPSNDRIYLGKMD VDGDALRLRGCVAGGLLCSSQNWVRVE" gene 1452050..1452802 /locus_tag="SKA53_07381" CDS 1452050..1452802 /locus_tag="SKA53_07381" /EC_number="5.3.1.16" /note="COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase" /codon_start=1 /transl_table=11 /product="1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase" /db_xref="CDD:9981" /translation="MRKVAPMILYPAIDLKDGQAVRLVHGDMNQTTVFNDDPAAQARA FVDAGCTWLHLVDLNGAFAGTPVNAAPVEAILKACPVPAQLGGGIRDMATIEAWLDKG LARVILGTVAVENPDLVRQAARAFPGQVAVGLDARGGRVATRGWAEETDVMVTDLARS FEDAGIAAIIYTDILRDGAMKGPNIAATADLARAVSIPVIASGGVSSLADLTALRDTG VIAGAISGRALYDGALDLAQALRMLAEPRSRA" gene 1452811..1453569 /locus_tag="SKA53_07386" CDS 1452811..1453569 /locus_tag="SKA53_07386" /EC_number="4.1.3.-" /note="COG0107 Imidazoleglycerol-phosphate synthase" /codon_start=1 /transl_table=11 /product="imidazole glycerol phosphate synthase subunit HisF" /db_xref="CDD:9982" /translation="MLKVRIIPCLDVAEGRTVKGVNFVDLVDAGDPVAQAMAYNAAGA DELVFLDIKATHENRGTMFDLATRTAEQCFMPLTIGGGVRTHHDVRDLLLAGADKVSF NSAAVANPDVVAEAAMRFGSQCIVVAIDAKTVASGKWEIFTHGGRRATGIDAVEFART VVEKGAGEILLTSMDRDGTKAGFNLPLTRAISDAVDVPVIASGGVGTLDHLVEGVTIG GASAVLAASIFHFGTFTIAQAKAHMAAAGIAVRP" gene 1453566..1453877 /locus_tag="SKA53_07391" CDS 1453566..1453877 /locus_tag="SKA53_07391" /note="COG0140 Phosphoribosyl-ATP pyrophosphohydrolase" /codon_start=1 /transl_table=11 /product="phosphoribosyl-ATP pyrophosphohydrolase" /db_xref="CDD:10015" /translation="MTLDDLAALIAARKNADPASSWTAQLLAKGPEKCAEKFGEEAIE AIIEAVKGDREKLTSEAADVLYHLLVMLTARDVTLAEVVAELARRQGTSGIAEKSTRP S" gene complement(1453928..1454395) /locus_tag="SKA53_07396" CDS complement(1453928..1454395) /locus_tag="SKA53_07396" /note="COG1832 Predicted CoA-binding protein" /codon_start=1 /transl_table=11 /product="CoA-binding domain protein" /db_xref="CDD:11542" /translation="MIINDDSLRRILKRSRTIAVVGVSANPVRPSYFVARYLGLKGFR VIPVNPGLAGQTLFGETVYASLVDIPHDVDMVDIFRKPDAVPALVDEALARWPDLQTI WMQIGVTHPEAAAKAEARGVTVVQDRCPKIEYQRLFGELRMGGFATGIISSKL" gene complement(1454588..1454881) /locus_tag="SKA53_07401" CDS complement(1454588..1454881) /locus_tag="SKA53_07401" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAGTKIATCCYCGTRAALVLRGQNRHELSCSNCGAPLHVMKMLP ATKAPAPQPQKRPYTPPHPERQQVARPQKRRKGKSFGRKVFSEIWDIIEDVFD" gene complement(1454896..1455672) /locus_tag="SKA53_07406" CDS complement(1454896..1455672) /locus_tag="SKA53_07406" /note="COG0566 rRNA methylases" /codon_start=1 /transl_table=11 /product="RNA methyltransferase, TrmH family, group 3" /db_xref="CDD:10437" /translation="MKKPTWVIAKEQAKRVASQETVWLFGLHAVRDALENPAREKLRL IVTRNALERLGDAVATGGIEPEISDPRKFAAPLDPQSVHQGAALEVKPLDWGSLQDVA LREGPMPPRIVLLDRVTDPHNVGAILRSAEVFGARAVVAMQRHAAPETGALAKTASGA LERQPYLRVRNLADSIVELQQMGYLVLGLDGEAETTIEEAVEGKRDRAVALVMGAEGP GLRDKTRETCDILVRIDASADFGSLNVSNAAAVALYAARG" gene 1455962..1456945 /locus_tag="SKA53_07411" CDS 1455962..1456945 /locus_tag="SKA53_07411" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPQPFNIMIVGQGGRLQYEALVFVASLRAHAPGFAGRMIVAEPQ PGPLWQDDPRMTPEITAALVALEAEVVPFTAQHFGQAYPHGNKIEGLQALPAGAPFVF FDSDTLITGDISTVPFDFTRPAASMNRTGTWPVEDLYWPGYTAIWQSLYDKFGLDFAS SLDLSQPDEFWERYLYFNAGWFYGADPAQFGALFTKYAVAIRDAPPPELVIQPLDPWL DQVALPLVIHALKGGRPDAALAGLDGDLTCHYRLLPLLYARGSDAQIAALEQVCAPNK IKKHLRQHPPFKRMVYQGQGQKVRALFDRANLPRHERAIRNQIRAAGYWMR" gene complement(1457052..1457465) /locus_tag="SKA53_07416" CDS complement(1457052..1457465) /locus_tag="SKA53_07416" /note="COG3565 Predicted dioxygenase of extradiol dioxygenase family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12892" /translation="MPVPFHFAYHVTDLDEARAFYTGALGAIEGRSTDTWVDFDFFGH QLSLHLGEPFANAPTGKVGDHMVPMPHFGVVLPLDDWTQLAGRLEDRQTDFILAPSVR FKGEPGEQWTMFFRDPSGNPIEIKGFAAESGVFAA" gene 1457626..1458921 /locus_tag="SKA53_07421" CDS 1457626..1458921 /locus_tag="SKA53_07421" /note="COG2873 O-acetylhomoserine sulfhydrylase" /codon_start=1 /transl_table=11 /product="O-acetylhomoserine aminocarboxypropyltransferase" /db_xref="CDD:12225" /translation="MMTDAPSYGFDTLQVHAGARPDPATGARQVPIYQTTAYVFRDAE HAAALFNLQEVGYIYSRLTNPTVAALQERIATLEGGVGGVCCSSGHAAQIMALFPLMQ PGRNIVASSRLYGGTVTQFSQTIKRFGWSAKFVDFDDHAAVAAAIDDDTRAVFCEAIA NPGGHITDLDAISAISDAAGIPLIVDNTTATPYLCRPIEHGATLVVHSTTKYLTGNGT VTGGCIVDSGKFDWRANDKFPSLSQPEPAYHGLTFAETFGPLAFTFHGIAIGLRDLGM TMNPQAAHYTLMGIETLSLRMDRHVQNAQTIAKWLQDDPRIDYVTYAGLDSSPYAHLV PKICPKGAGALFTIAVKGGYDACVKLVDSLEIFSHVANLGDTRSLVIHSASTTHRQLT PEQQKAAGAGPNIVRLSIGIEDARDLIADLDQALAKAVG" gene 1459040..1461325 /locus_tag="SKA53_07426" CDS 1459040..1461325 /locus_tag="SKA53_07426" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTPDFALSLSLAGIDLLQRTDTGWRRVGTASLLSQDIAADLADL RSKGQALAPDGFCTKLVIPMEQVKYLALDGIQTTLADITQALDGTTPYALDALAIDFE RSNGRTHIAAVAQDTLREAEDFAAAHGFNPVAFVAVPDPDTFAQEIFFGPTTMAARNL GPGVTVTRDSLPVRLIGTRIKAYMLEPHTAVIPSAAASEPAQVTPLDQIITEYYPQHR PAAVVPALPRVVLSDAVPAAPDHLDRIIGAYHAPTTQTEVPMIAVPAPGSTRAVVLGG VMATVSTAALRWPAYRVSGAIAASLAALGVIWWLQSGPMPVDAVPVDVPVTVAAQSQS GPTAVQLDIAIAPPDQQALAQRLPEADTAFATSPPPLPLTPDAADSPGGAPQPPPARV MATTHVLSADQAQAAYAATGVWQRPPRFVDQPSATTTQDVTLPAIAAAPIPVAAPRLA DIETLTTDLAFVPPAIPPAAGTIFDIDEDGFVRATPEGTLTPEGVVVYAGLPNVPFRV RPTLPPNTDAALVDTSVADILADIVVIPGPPPVVPPVRPAAVEDRTAGGVSLAGLQPG ATGQDAIGDLAPPPGAIRPRVRPALPASATVASEIEAVLGGIALATPNPSATASALAV TRSLRPTSRPNNFDRVVAAARSRQQPAAAPSLGAIAAAPAAPVQTAAPPAPQNYEPVP GGVARAATQDSAIRLRDINLIGVYGQPSARRALVRLSNGQFVRVQVGSDLDGGQVTAI GENALNYVKRGTTYALQIPQG" gene complement(1461370..1462401) /locus_tag="SKA53_07431" CDS complement(1461370..1462401) /locus_tag="SKA53_07431" /note="COG2038 NaMN:DMB phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="nicotinate-nucleotide-- dimethylbenzimidazolephosphoribosyltransferase" /db_xref="CDD:25893" /translation="MLRNEDLMTAPFTTLADFRAIFADLTAPDASAIAGATDRNGQLT KPQGALGRLEDLAIWYAGWRGNPRPAITAPQVIIFAGNHGICAQGVSAFPPEVTAQMV ANFDHGGAAINQLSKAAGARMDVHALSLETPTADFTQAPAMTEAELVSALQTGWSAVD PAADLLVTGEMGIGNTTSAAALAAALFGGTGADWAGRGTGVDDAGLARKVAAVDAGLA LHDVADPLEALRCLGGREIAAMAGAMAAARAHRIPVILDGFICSAAAGVLHKLHPAGL DHTVAGHLSLEGAHQTLLDALGKQPLLSLGLRLGEGSGAALAITILQGAIACHSGMAT FAEAGVSDA" gene 1462431..1463219 /locus_tag="SKA53_07436" CDS 1462431..1463219 /locus_tag="SKA53_07436" /note="COG0368 Cobalamin-5-phosphate synthase" /codon_start=1 /transl_table=11 /product="putative Cobalamin (5'-phosphate) synthase" /db_xref="CDD:10242" /translation="MKRAARGKQLTNPDNRLFAAIDLPAALGLLTRLPVPVDGAAATA RGAAAVWAYPLAGMIVGGMQALAMAVLLWLGVPAAITAALVLALAVSVTGAMHEDGLA DSVDGLWGGWDKARRLAIMKDSHIGTYGVIALVLTLVLRWTALGMIAGAGGFALVLVT VAALSRAAMVGVMATLPHARDGGLSRAVGRPAPRVAWVAIGIGAGLALVTGYLGLVIV AATVAVLWAMIARAKIGGQTGDILGGAQQFVEVALLIAVVSALD" gene complement(1463216..1463944) /locus_tag="SKA53_07441" CDS complement(1463216..1463944) /locus_tag="SKA53_07441" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLCLLALAVFPALAQAQTITDARLTGPTDRYPHGVLGAPSEHD TLEVTLADGRQLATRWPAPMVFEYTSPRVVDLNGDGAAEVIVVQSHETFGAQLAVWGL RDGALQPLVAAPHIGTRFRWLAVAGAADLDGDGAIEIAYIDRPHLARELVVVRISQAG DAWSLREIARSAGLTNHRIGQTDIAGGIRDCGPGPDIITANADWSRIIATRLHDGRLQ QTDIGRHDGTDSFAIALRCGLLPD" gene complement(1463944..1464267) /locus_tag="SKA53_07446" CDS complement(1463944..1464267) /locus_tag="SKA53_07446" /note="COG0633 Ferredoxin" /codon_start=1 /transl_table=11 /product="iron-sulfur cluster-binding protein" /db_xref="CDD:10503" /translation="MAKITYVEHGGKEHVVDVANGLTVMEGARDNGIPGIEADCGGAC ACSTCHVYVDDAWVAKLPAKDAMEDDMLDFAYQPDPVKSRLTCQLKVSDALDGLRVQM PEKQI" gene complement(1464403..1465830) /locus_tag="SKA53_07451" CDS complement(1464403..1465830) /locus_tag="SKA53_07451" /note="COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain" /codon_start=1 /transl_table=11 /product="possible serine protease" /db_xref="CDD:10140" /translation="MRRILIACASAILLAVSFLVMQAVAASAQDRPPSFADLAELVSP SVVNITTSTTIAERTMPRGIVPDGSPFEDFFNNGPRGGPQRSSALGSGFVISADGFIV TNNHVIEGADEILIEFYSGVELPAELIGTDPNTDIAVLKVDASDLPFVAFGDSNAEGA RVGDWVMAMGNPLGQGFSVSVGIVSARNRALSGTYDDYIQTDAAINRGNSGGPLFNMD GQVIGVNTAILSPTGGSIGIGFAMSSDVVVNVVDQLIEFGETRRGWLGVRIQDVTPDM VSAIDGLDNARGALVTDVPAGPAEESGMLSGDVILIFDGVEIADTRELVRIVGNSPVG KEVPVQVLRDGETEQLIVVLGRRETSEAVAFPAAAPEAPAAEPDTLLGLTLEPVSPEL VEQFSLNVDQGLVITAIAPDSDAASKGLIEGDVITEASRQPVGTMDELRAQIDLATEA GRTSILMLVRRGGDPRFVALVLDQE" gene complement(1466035..1466988) /locus_tag="SKA53_07456" CDS complement(1466035..1466988) /locus_tag="SKA53_07456" /note="COG0330 Membrane protease subunits, stomatin/prohibitin homologs" /codon_start=1 /transl_table=11 /product="HflC protein" /db_xref="CDD:10204" /translation="MRKTALLIPALVVIIGVAMSSVFIVDEREKALVLQFGQIVSVKE EPGLGFKIPLIQEVVKYDDRILSRDLDPIEVTPADDRRLVVDAFARFRIADVEQFRRA VGVGGLAAASQRLDSILRAETREVLGSVSSNDILSIDRAALMLRIRNGAITQAQALGL QVLDVRLKRTDLPEANLNATYERMKAEREREAADEIARGREAAQRIQAQADRTVIELV SEAEREAQVIQGEADALRNEIFATAFGADPEFFEFYRSMTAYQRALQGGNTMMVMSPE SEFFNYLRSAQGAESLRSTGNGDTGAAVQNLPPVEDEAALR" gene complement(1466988..1468136) /locus_tag="SKA53_07461" CDS complement(1466988..1468136) /locus_tag="SKA53_07461" /note="COG0330 Membrane protease subunits, stomatin/prohibitin homologs" /codon_start=1 /transl_table=11 /product="HflK protein" /db_xref="CDD:10204" /translation="MAGNSGGPWGGGGNKGGNGDDDRNRGGGRRPGNDGPNIPEIDEL VNKGREQLRVLMGGGRGGSRGPGGESGGQGPQLTRGTVGLGILALVALWLFASFYTVR PEERSVELFLGSYYKTGEPGLNFAPWPVVTREVLAVSTERTIDVGASATRRDPGLMLT GDENIVDIDFQIVWNIIDPQLYLFSLTDPPQTIAAVSESAMREIISQSELAPILNRDR GAIADSLREAIQASLDSFDSGVNVIRVNFDKADPPEPVIAAFRQVQDARQERDRLQNV ADAYANRVVAEARGQSAQVLEQAEGYRARVVNEALGEASRFSAILAEYVQAPDVTRKR IYLETLEGVLSDVDIIMMDENAAGSQGVVPYLPLNEMRRTPAATGGNN" gene complement(1468213..1469649) /locus_tag="SKA53_07466" CDS complement(1468213..1469649) /locus_tag="SKA53_07466" /note="COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /codon_start=1 /transl_table=11 /product="glutathione-disulfide reductase" /db_xref="CDD:10966" /translation="MNFDYDLFVIGGGSGGVRAARVAAATGAKVALAEEFRMGGTCVI RGCVPKKLMVFASGYSEMFDDARAYGWDVTDGPFDWPRFRRHLHKELDRLEGIYRKLL DNSGVEICDARASVTDAHTVVLSTGRTVTAKHILIATGGRPVVPDIPGAGLGITSNEI FLLDELPKSILIVGGGYIASEFAGILNGLGVKVTQFYRGAQILRGFDDEARGLVAEGM REKGVNLHLGTNIVEMRAATADDLQDNGMSAPIEQGKPVSAPSGEPAKGIWVKATNGQ EAIFDQVMFATGRAPNTENIGLAAAGVQIGRRGEIVVDDYSQTGVPSIYAIGDVTDRV QLTPVAIREAMAFVETVFKGNPTKPDHDLIPSAIFTQPEMGTIGLTEEAARDIEPVEI YCTSFKPMNHAFAGRTDRVMMKLVVSCATRKVLGCHIVADHAGEMIQLAAIAIKMGAT KEDFDRTVAVHPTMAEELVTMKDPVRRA" gene complement(1469677..1470465) /locus_tag="SKA53_07471" CDS complement(1469677..1470465) /locus_tag="SKA53_07471" /note="COG0120 Ribose 5-phosphate isomerase" /codon_start=1 /transl_table=11 /product="ribose 5-phosphate isomerase" /db_xref="CDD:9995" /translation="MTIDLFPMDTAKFVAAKQATHYVQSGMKVGLGTGSTAAWLVQCL GEMVRDHGLQIKGVPTSNRTAELARAAGIEIITLDQAKWLDLTIDGTDEYDANLNLIK GGGGAHLREKIVATASDRMIVIADASKTVATLGAFPLPVEVLPFGMQITRGLIEELLV GVDVLGRDVIQRMQGDAPYVTDEGNFILDLHLKSIGNPRQLAMMLNQIPGVVENGLFI DICDVVIVGHGTGKVEIRDITNDINDVVQFDLQDDDNLFADLAK" gene 1470629..1472002 /locus_tag="SKA53_07476" CDS 1470629..1472002 /locus_tag="SKA53_07476" /note="COG1760 L-serine deaminase" /codon_start=1 /transl_table=11 /product="probable L-serine dehydratase protein" /db_xref="CDD:26049" /translation="MFLSVFDMFKVGIGPSSSHTIGPMVAAARFLDHLRALPFSVAGL RASLHGSLAFTGIGHATDRAVILGLAGMRADDYDATRAEAELARIKADRTIAPDGLGL LRFDPSADLRFDYGPALPGHANGLVLSGTDAQGDVITQVTYYSIGGGFVLTADELAAG RAADTGPAVPYPFRTAAEMLQMASASGQSIAAMKRANELTRMSAADLDRGLARIWQVM NACIDRGLATDGILPGGLFVRRRAKGIYTALMAERGLNMTAPHTINDYMSTYAMAVNE ENAAGGQVVTAPTNGAAGVVPATIRYWLDHVPGAASSRVGDFLLTAAAVGGLIKTNAS ISGAECGCQAEVGSAAAMAAAGLAAVLGGTPEQVENAAEIALEHHLGMTCDPVKGLVQ VPCIERNGLGAIKAVSAASLALRGDGQHLVALDVAIETMRQTGADMSEKYKETALGGL AVNVPNC" gene complement(1472097..1472765) /locus_tag="SKA53_07481" CDS complement(1472097..1472765) /locus_tag="SKA53_07481" /note="COG1564 Thiamine pyrophosphokinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11277" /translation="MMHPSIVSSSSAISLVGGAPVADAVFAVVSPYVAGFVGVDGGAD HLLAGGIAPIAVIGDLDSVSTQARAAFADCLWHIPEQDTTDFEKALTRVTAPFVIALG FTGGRMDHALSVLNVMARMPDRRVFLVDADDVSYLAPQGKSMLDLPAGTRVSLMPLGD VRASAAGVAWPFTDWALHPVGRNSASNMAAEGGVQITAQGPLLVTLPLACLAAAITSG MRAG" gene 1472901..1474292 /locus_tag="SKA53_07486" CDS 1472901..1474292 /locus_tag="SKA53_07486" /note="COG0419 ATPase involved in DNA repair" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /translation="MTDQTQILDVTYGMFSCRLEGFDDSVATMKQIVSYFHDLAGHEA FVGDALLAPDMDEVSRVAGVSSGGDIEAAMAGGKLRLRLRDTPAQSADEDAADAAFDQ ESVAAKLDRIRSVVGRGHVTETTNRPTAEQAEEDGVAPQSGVNPLAQRLAALAKRNAE RAATQAGALPHLQDAPEIMDDANSADVVTALPSENQTSDESLHLANLVADDGLDLHAE VAEIERVIEDRKKRHALSDNADDAISRILSHTDAALNQPEHRRQQDAFAQLKAAVAAT EAARQLGDDGAPQHRPSEVYRDDLDEFETVEDTDDADMVADAVNPNPDAISAPRSPAT LRLVASQRADIPAEPASQRLRQIAAKATDSGQRLISFAEFAADYAATSLEDLIEAAAA YITFLLGEDDFSRPQVMKLVQSLTQTEISREDGLRCFGRLLRQNRIIKLDNGRFQVTD GTRFRPDDMTARG" gene complement(1474326..1474547) /locus_tag="SKA53_07491" CDS complement(1474326..1474547) /locus_tag="SKA53_07491" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTYKNRKRLSLFVLVVGLPAYIVLAVTIMSEASRFPIAIELLIY VVLGIAWVFPLKWVFKGIGQADPDAPDHK" gene complement(1474553..1475845) /locus_tag="SKA53_07496" CDS complement(1474553..1475845) /locus_tag="SKA53_07496" /EC_number="6.3.4.4" /note="COG0104 Adenylosuccinate synthase" /codon_start=1 /transl_table=11 /product="adenylosuccinate synthetase" /db_xref="CDD:17796" /translation="MANVVVVGAQWGDEGKGKIVDWLSERADVIARFQGGHNAGHTLV IDGKVYKLSLLPSGIVRGGKLSVIGNGVVLDPWHLIKEIGILRDQGVTITPDTLMVAE NTPLILPFHGELDRAREANVGMAKIGTTGRGIGPCYEDKVGRRVIRVADLADDATLEL RLDRALAHHDALRRGLGLDPIDRAAILADLRAIAPQVLAYAAPVWKVLNEQRKAGKRI LFEGAQGALLDIDFGTYPYVTSSNVIAGQAATGVGMGPGAIDFVLGIVKAYTTRVGEG PFPTELHDADGERLGQRGHEFGTVTGRKRRCGWFDACLLRQTCATSGINGIALTKLDV LDGFEVLKICVGYDLDGVRLDYLPTAADQQARCTPIYEEIEGWSQSTMGARSWADLPA QAIKYVRRIEELIDCPVALVSTSPEREDTILVTDPFAD" gene 1476029..1476382 /locus_tag="SKA53_07501" CDS 1476029..1476382 /locus_tag="SKA53_07501" /codon_start=1 /transl_table=11 /product="preprotein translocase, SecG subunit" /translation="MENVVLIIHLILALSLIGTVLLQRSEGGGLGMGGGGGTANSRPP ASAISKFTWMLAAAFIATSITLTLIAAGNTAGLSVADRVGGINLNQNDVTVPDLGDSL LPPSAAEEPLLPAGD" gene 1476541..1478184 /locus_tag="SKA53_07506" CDS 1476541..1478184 /locus_tag="SKA53_07506" /EC_number="6.3.4.2" /note="COG0504 CTP synthase (UTP-ammonia lyase)" /codon_start=1 /transl_table=11 /product="CTP synthetase" /db_xref="CDD:10375" /translation="MARYIFITGGVVSSLGKGLASAALGALLQARGFSVRLRKLDPYL NVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTGVPARQTDSVSSGRIYSTVLEKE RRGDYLGKTIQVVPHVTNEIKEFLKIGEDEVDFMLCEIGGTVGDIEGLPFFEAIRQFA HDKKRGQCIFMHLTLLPYLAASGELKTKPTQHSVKELQSIGIAPDILVCRSEHPIPEK EREKIALFCNVRKEAVVAAYDLKSIYEAPLAYHEQGLDQAVLDAFDISPAPAPNLAMW HDVYDRIHNPEGHVKIAIVGKYTQLEDAYKSIAEALTHGGMANRVKVKIEWVDAELFD REDAAPYLEGYHAILVPGGFGERGTEGKIKAAQFAREKKVPYLGICLGMQMAVIEAAR NVAGLAKAGSEEFDHEAGGKRFEPVVYHLKEWVQGNHTVARKADDDKGGTMRLGAYTA SLKPGSKVADVYGSTTIEERHRHRYEVDTKYRETLESAGLLFSGMSPDGKLPEIVEWQ DHPWFIGVQFHPELKSKPFAPHPLFADFVRAAVEMSRLV" gene complement(1478237..1478974) /locus_tag="SKA53_07511" CDS complement(1478237..1478974) /locus_tag="SKA53_07511" /note="COG3713 Outer membrane protein V" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26741" /translation="MRCLMILALGFPVSGLAQTNDGTDVFIGLGARSAPAYFGADSNE TGVTGRLKFAETLAGDIALGESGLYSLDLGGSLRFVRARTASDHAALTGLSDIDPTLE VGGEVTFIAPQYQVFSALRYGLGGHAAFVAELGGDLVYRADDAWSLRGGPRLLWGSDD YAQTYFGVTAAEATASAFDAYDAGAGVISAGIAAEVMYQVTPDWGVLGILRYDQLQGD AADSPVVQSKDQTSVSLMVTRRFSFGF" gene 1479093..1479881 /locus_tag="SKA53_07516" CDS 1479093..1479881 /locus_tag="SKA53_07516" /note="COG2961 Protein involved in catabolism of external DNA" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12306" /translation="MLSYQHGYHAGNLADVHKHALLAWMLAYLTQKDKPLSYLETHAG RGLYDLTDAAALKTGEAAKGIAVAADWFAPDHPYRTVLGRIRATYGANAYPGSPLVAA EMLRPVDSIHLAELHPQEYAALATNMAPYGGVFRQRDGFEMALSLCPPDPRRGLMLVD PSFEVKTDYDTIPPLLAKVHRKWGVGVLVLWYPILTDGPHRPMLRTLQEAFPEGFRHE VGFPPAREGHRMTGSGLFVVNPPYGLQDEGARLSAMFQQQLMQN" gene 1479919..1480356 /locus_tag="SKA53_07521" CDS 1479919..1480356 /locus_tag="SKA53_07521" /note="COG4103 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27156" /translation="MFADLIRRMTAPAPQPLSDPDARLALGALLVRIARTDGRYDPSE KAQIDQTLMSRYDLDEAEAATLRADCERLESEAPDTVRFTRAIKDAVAYEQRLSVIEA LWRVVLADGLRDVHEDSMMRMTVSLLGITDQDSNAARLRVTPS" gene 1480371..1481096 /locus_tag="SKA53_07526" CDS 1480371..1481096 /locus_tag="SKA53_07526" /note="COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12559" /translation="MYLRPANTAAHCALWALIRDGLRNRDLPAPDALDEDIDYQASWA HPDLVLGQICNLPYRAQFRDRVTLVAAMDYDLPGCAPGYYNSVFIVNRDSHLSDLRHL RGRRMAASALLSQSGYGAAQQWGADQGFVFASPLITGSHAASIKAVATGAADFASIDA QTWWMAQQDDPLTGQVRVIGTTPASPCMTLITRKEQNPAPYLAAVTDAIAALPETHRQ MLGLRGVVALPPAAYDIALPPDP" gene 1481212..1481985 /locus_tag="SKA53_07531" CDS 1481212..1481985 /locus_tag="SKA53_07531" /note="COG4598 ABC-type histidine transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC basic amino acid transporter, ATPase subunit" /db_xref="CDD:13758" /translation="MTNSVPVIEIRDLHKSYGSLEVLKGVDITAPAGHVVSLIGSSGS GKSTLLRCANLLEDSQQGDVIFCGEAVTWKGTGLNRRPGDHAQMIRIRTNLSMVFQQF NLWAHMTILQNVMEAPVTVLKRPKAEVEGAARAYLDKVGIGDKCDAYPAQLSGGQQQR AAIARALCMEPKALLFDEPTSALDPELEQEVIRVIKDLAAEGRTMIIVTHDMRLAADV SDHVVFLHQGRIEEQGAPDALFANPTTERLRGFLSATVA" gene 1482003..1482725 /locus_tag="SKA53_07536" CDS 1482003..1482725 /locus_tag="SKA53_07536" /note="COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /codon_start=1 /transl_table=11 /product="ABC basic amino acid transporter, solute-binding protein" /db_xref="CDD:25526" /translation="MMNKLIVTSVAAALLGSAAMAQDVVRLGTEGAYPPYNFINDAGE VDGFERELGDELCARAELTCTWVTNDWDSIIPNLVSGNYDAIIAGMSITEERKEVIDF SDPYTQPDPSAFLAMGDVDFANAVIAAQSGTIQASYVTGMAGATLLEFATPDETISAV RNGEADAVLADKAFLEPIDSEGGDLSFVGDDVLIGGGIGLGVRQSDTELRDTFSAAIQ SMKDDGSLNALITKWLPGSATF" gene 1482814..1483668 /locus_tag="SKA53_07541" CDS 1482814..1483668 /locus_tag="SKA53_07541" /note="COG4215 ABC-type arginine transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein, HisMQ family" /db_xref="CDD:13467" /translation="METFQWFACYLTTGKHMQIYSAVGTVLLLLALTAPAALAFGFAG AAAARSAVAPLRWIGNTYIAVVRGVPDIAFFLFFVIALDQALEYVRHRVKCPDWEQAV WQGNDFVVCQAAKLPLGNAAQWVHDTYAFAVAAFTFAIVFGAFAANVLFGAMRAVPRG QLETAEAYGMSQRQTFWRVLVPQMWVYALPGLSNLWMVLIKATPLLFLLGIQDIVYWA RELGGAAQPRFTDYPHPDWRQWYFLALLVFYLCFTKVSEIVLDRIMARLTFGQATAAG EAQRKAAT" gene 1483665..1484471 /locus_tag="SKA53_07546" CDS 1483665..1484471 /locus_tag="SKA53_07546" /note="COG4160 ABC-type arginine/histidine transport system, permease component" /codon_start=1 /transl_table=11 /product="His/Glu/Gln/Arg/opine family ABC transporter, permease protein" /db_xref="CDD:13431" /translation="MSCWETILDYALRSQGLGERLLPQRDFTLCQQFTLIGSGMIWNI YFGLVALCTGFVLATAVALGKASRNRVIHKASAWFIFLFRGSPLFIQFFFAYFLFLSL KNVSPFFDPFTSAWAGALVVLFLNTAAYSGEIFYGALQSIPKGDLEAADAYGLSGWAR FRRITFPTMLRLGWPAYTNEAIFLFHATTLVFFSGFPAIQQKGDALYYARYFADKTFN PFIPYPILAGYFIALTLVVIGVFGLVNGRLNRHLPQNMRAKLRFKPQVIR" gene 1484468..1485799 /locus_tag="SKA53_07551" CDS 1484468..1485799 /locus_tag="SKA53_07551" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="glutamine synthetase family protein" /db_xref="CDD:22916" /translation="MSWIDDRPEVRNVRCGAADLNGQARGKRVPRKFAAKLEEEGTRF PFSILNLDIWGEDVEDSPLVFEAGDPDGVLMPTERGYVPMPWLNSPSALLPMWMFHED GTPFAGDPRQALARVVEKYHTRGLTPVVATEMEFYLVDDSGDGIRQPRSPRSGKRRPG AEILSLRALDAFDMFFNDLYDACDAMNIPAEAAISEVGMGQFEINLEHVSDALKAADD AWLFKMLVRGLARNHGMAASFMAKPYEEYAGSGLHTHFSVVDAEGNNLMANDTFEGTR LLHNTIAGCLKGIPDLALIFAPHGNSYERLVPESHAPTGVCWAYDNRTASVRVPGGSF KARRVEHRVAGGDVNPYLFLAAVLGSALIGIEDDLTPPPPISGNAYEQEMLQIPDTWA AAIDAFENSRIARRIFDDTLVDNFVMTKRQELHYFAELSEEQQLELYLDTV" gene 1485869..1486552 /locus_tag="SKA53_07556" CDS 1485869..1486552 /locus_tag="SKA53_07556" /note="COG0518 GMP synthase - Glutamine amidotransferase domain" /codon_start=1 /transl_table=11 /product="Glutamine amidotransferase class-I" /db_xref="CDD:10389" /translation="MKIGILQTGHAPDELRPTTGDFSDLFQGLLGGHGFEFTVYNVVD MDFPAAITDCDGWLITGSKHGAYEDHPFIPPLEAMIRDIYAADIPLVGVCFGHQIIAQ ALGGTVTKFDGGWSVGRQRYQINGADFALNAWHQDQVVVRPKDATVVGSNDFCANAAL VYGNRIFTVQPHPEFDKQVIDGLVTYRGPGNVPDAQLAQVRNDLDKPVDNGRLATQIA RFFKERELA" gene 1486549..1487901 /locus_tag="SKA53_07561" CDS 1486549..1487901 /locus_tag="SKA53_07561" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="glutamine synthetase family protein" /db_xref="CDD:22916" /translation="MSWTTKIPAAATAYLEANRLDEVECVIADLPGIARGKAVPAGKW EKQTHFHLPNSIFFQTITGDWGEASGPDGFLEPDMILKPDLSTATAAPWAADGTLQVI HDAYDQKGKPVAFSPRNVLRRVVDLYKAEGWTPVVAPEMEFYLVGRNIDPAKAIEPMM GRTGRPAAGRQAYSMTAVDDYGPVIDDIYEYAEIQGFEIDGIAQEGGAGQLEINLRHG DPIKLADEVFFFKRLIREAALKHDCFATFMAKPIEGEPGSAMHVHHSVIDAKGRNIFT GPGGGETDAFFHFIGGLQEHMPSAIAVIAPYVNSYRRYVRDSAAPVNLEWGRDNRTTG IRIPISDPAARRIENRLPGMDCNPYLCIAASLACGYLGLKNEIRPDKRWVGEAYESES EIAGSLSDALDLFDEAKELRAVLGEDFARVYSIVKRLEYKEFLQVISPWEREHLLLNV " gene 1487898..1489202 /locus_tag="SKA53_07566" CDS 1487898..1489202 /locus_tag="SKA53_07566" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10534" /translation="MNPLYRNDRPGQMPKSWYVASTDLPPERPALFGETVADVCVIGA GYTGLSAAWHLAQKGLDVVVLDAHRAGFGASGRNGGQVGTGYNASQQSLARKLGAGNA TALWALAEEAKADVRRICADHIPEAQYKPGVAHGYYSATEARDYDADADYLAQSYGYD QIEKLHPDAMRDLVKSPLYQGGLLDMGAGHLHPLRYALGLARLAEAAGARIYDRSEVT GLAMGDPAVVQTGQGRVRARHVIMAGNGYMPNINRAVAAKVMPINSFICATEPLGDRA RDVLARDIAVADSKFVVNYYRMSEDNRFLFGGRESYSIGFPRDISTALIQRMTTLFPQ LDGVKVDYVWGGTLGITMTRLPAIQRVAPNVLSGAGFSGHGVALSGLAGKIMAEAVAG QAGRFDTLAGLNVPSFPGGRALRAPLLTLAMTWYALRDRLGV" gene complement(1489206..1489742) /locus_tag="SKA53_07571" CDS complement(1489206..1489742) /locus_tag="SKA53_07571" /note="COG5394 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="polyhydroxyalkanoate synthesis repressor PhaR" /db_xref="CDD:14479" /translation="MADTNKPLLIKRYASRRLYNTETSDYVTLEDIALFIREGREVQI VDLKSGDDLTRQYLLQIIAEHESRGESVLPVDVLTDLVRSYTTQAASVVPQFLAASFE MLRDGQSKAMENMTKANPMTAMPGFDAMRAQQAAFFKAMTGGLVGGNTAPAKDGDDLD DIKTQLAALQEKLAKMGK" gene complement(1489895..1490341) /locus_tag="SKA53_07576" CDS complement(1489895..1490341) /locus_tag="SKA53_07576" /codon_start=1 /transl_table=11 /product="phasin, PhaP" /translation="MAKTQDFTGVFKDMMGAFPVDTKAMEDTFKNQTALAEKMSSVAI DAAHKSTELSAKWAQDTLTKLQSMASAKTEPTDYAKAMTDFASASAESAAEHMAAFAE IAKKVQTQTMELVLAAGKDMSEEMTAAAKKATNEVTAAAKKATAAK" gene complement(1490484..1492286) /locus_tag="SKA53_07581" CDS complement(1490484..1492286) /locus_tag="SKA53_07581" /note="COG3243 Poly(3-hydroxyalkanoate) synthetase" /codon_start=1 /transl_table=11 /product="poly-beta-hydroxybutyrate polymerase" /db_xref="CDD:12580" /translation="MNMTTNDLDPVTETGAGVAKLEANLARVEELTQRLLKVMGQSRK VAPSLQGPSQELYVKAASAYMAEMMQNPAKLIEHQLSFWGKSVKHYVEAQHLLAQGKL TPPTDETPKDRRFSHELWDTNPYFNFIKQQYLMNAAAVQQAVEDIDNLDADEKKRLRY FSQQMVDMISPTNFLPTNPEALALAAETEGESLVAGLENMIADLEANDGDLVVTLADK KAFKLGENLATTPGSVVFRNHLFELIQYAPSTETVHEIPLLIFPPWINKFYILDLKPQ NSLIKWAVDQGYTVFVVSWVNPDASYADTSMSDYVEDGYLTAIAEAKKICGVKKINAV GYCIAGTTLSLTLALMKQRKDTSVNTATLFTTLTDFSDRGEVGVFLDDDFVDGIEAEV AQNGILDSFFMSRTFSYLRSNDLIYGPAIKSYMLGKAPPAFDLLFWNGDGTNLPAKMS VEYLRGLCQGDRFATDGFEICGTMVHLKDVTVPLCAIACETDHIAAWKSSYAGVQKMG SKDKTFILSESGHIAGIINPPSKNKYGHYTNPELGLTADDWRLSAVRHDGSWWPRWDA WLAPKSGKSVPARTPGGADHPVLAPAPGTYVSAK" gene 1492343..1493611 /locus_tag="SKA53_07586" CDS 1492343..1493611 /locus_tag="SKA53_07586" /note="COG4553 Poly-beta-hydroxyalkanoate depolymerase" /codon_start=1 /transl_table=11 /product="polyhydroxyalkanoate depolymerase, intracellular" /db_xref="CDD:13723" /translation="MKYMMTYDLMESTRNTYQWLGASARAYASYPMMSWGTNPGMDWL KAWGEVTERTFARMVVKPDWNIPAISDDKGKDHPVVIKRVLERPFGDLIHFTTPGRKA SKRRVLVVAPMSGHYATLLRKTVISLLPDADVYITDWHNARDIPVSAGKFDVEDYTLY LVDFLRELGPDTHVIAVCQPVPLALAATAYLAAEDPKAQPRSLTLIGGPVDPDANPTE VTDFGRSVTMGQLEQTMIQRVGFKYAGVGRTVYPGLLQLASFISMNMETHTDAFRDQI IKSAKGEATEHDKHNMFYDEYLAVMDMTAEFYLSTVERIFKNREIALNSFTVNGKLVD LGKITTVAVNIVEGENDDISAPGQCLAALPLLTGLPDSKKAAHLEPGAGHYGIFAGRS WRQNIRPLVLAFIDANSGDTAKPANKNAAA" gene complement(1493613..1494332) /locus_tag="SKA53_07591" CDS complement(1493613..1494332) /locus_tag="SKA53_07591" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="hydrolase, alpha/beta fold family" /db_xref="CDD:10466" /translation="MPHDPIVLVPPMLCDLGVFGPQMLDLAKDHAVMFAPTTQGERME EIASQILTWAPAKFALAGMGMGGMVALELLRRAPQRVTRIALIATSAQAETPETAAAR EPHIIAAKGGGRWHEVVQHEINSTWMAPTTDRVALVRHLRQMAEALGPAVYVSQSRAM QRRKDQQSTLSQIKQPAMVICGQHDGQYPVKRQQFMAELIPYATLEVIEDAGYMPTLE APDQVTAALRRWMTAPLMLRL" gene complement(1494416..1495162) /locus_tag="SKA53_07596" CDS complement(1494416..1495162) /locus_tag="SKA53_07596" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11358" /translation="MPDYLITPAGRKIAYHLTDGSAPAVVFLGGFKSDMGGTKAVFLE DWARRQGRAFLRFDYSGHGDSSGAFTDGAIGDWYHDAQAAIGLVAGPVVLVGSSMGGW ISLLLARSQPDRVAGLVTIAAAPDFTEDSMWAGATEAQRAALMTDGQIALPSEYGDPY IITRRLIEDGRDYLVLRAPLQLPFPVRFLQGTADKDVDMAVAQRLLDHAQGPDMRLTL VDGADHRFSDDACLALIADSITDVIARAER" gene complement(1495204..1495557) /locus_tag="SKA53_07601" CDS complement(1495204..1495557) /locus_tag="SKA53_07601" /note="COG0072 Phenylalanyl-tRNA synthetase beta subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNPLHDLYAQIYVDCDALRSKTDISFRYETRAKGWIMPSYNRTF DLSIADVDLIEEALRARGRELSRMRLALTEENPAHLESIRVIEQDQRTGEELLGRLHD QKIFYRPRKAVYVGG" gene 1495654..1497600 /locus_tag="SKA53_07606" CDS 1495654..1497600 /locus_tag="SKA53_07606" /note="COG0441 Threonyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="threonyl-tRNA synthetase" /db_xref="CDD:10315" /translation="MAQISLTFPDGNSRQYDAGVTAGDVASDISPSLRKKAISATVNG AHWDLQWPIQADAQIAINTMKDEAPALELVRHDLAHIMARAVQEIWPDTQVTIGPVIK DGWYYDFDRKEPFTPEDLGLIEKKMKEIINKRDDVRTEIWDRARAVQYYTDRGEPYKV ELIDSIPGNEPLRMYWHGDWQDLCRGPHLQNTGQVPADAFKLMSIAGAYWRGDSTRPM LQRIYGTAFTNKDALKDHLHRLEEAAKRDHRKLGREMNLFHMQEEAPGQVFWHPDGWT IYTELQDYMRRRQRAGGYVEVNTPQVVDRKLWEKSGHWDKYQENMFIVEVDEEHAREK AVNALKPMNCPCHVQIFNQGLKSYRDLPLRMAEFGSCARYEPSGALHGIMRVRGFTQD DGHIFCREDQIEPETARFIAFLSRVYADLGFNDWTIKLSTRPEQRIGSDATWDMMEKA LGDACRAAGYDFELLEGEGAFYGPKLEFTLTDAIGRNWQCGTLQVDANLPERLDAEYI GTDGEKHRPVMLHRATLGSFERFIGILIEEHAGKLPFWLAPRQVVVATIVSDADDYAR DLVAALTAAGVRAEADTRNEKINYKVREHSVGKVPVILAVGAREVEERTATARQLGET QTRVVTMDEIVAELKQRATPPDLV" gene complement(1497601..1497930) /locus_tag="SKA53_07611" CDS complement(1497601..1497930) /locus_tag="SKA53_07611" /note="COG1393 Arsenate reductase and related proteins, glutaredoxin family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11108" /translation="MRFLGLKSCDTCRKALAALHAQGITPQVIDVRADGLDADDIQAI VAAFGDSAVNRASTTWRGLSEDARAQDTAALLAAYPTLMKRPVIATDDGWTIGWKPDV QAKYLRA" gene 1498064..1498273 /locus_tag="SKA53_07616" CDS 1498064..1498273 /locus_tag="SKA53_07616" /note="COG1278 Cold shock proteins" /codon_start=1 /transl_table=11 /product="cold shock family protein" /db_xref="CDD:16696" /translation="MPSGTVKWFNTTKGFGFIAPDDGGNDIFVHISAVEQSGMTGLAD NQKITFDLVEGRDGRKMAGNLAKAD" gene complement(1498270..1498590) /locus_tag="SKA53_07621" CDS complement(1498270..1498590) /locus_tag="SKA53_07621" /note="COG1393 Arsenate reductase and related proteins, glutaredoxin family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:17412" /translation="MILYGLPTCSDCKAALRALDDLGVTLRDIRADPLSADEWAPLIA EFGDNLIDRKSQAYRNLNAWLRESETDAQLDAQPALMARPVITDGSRWTLGWDAAAQA VWLG" gene 1498634..1498927 /locus_tag="SKA53_07626" CDS 1498634..1498927 /locus_tag="SKA53_07626" /note="COG1943 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11651" /translation="MSCYRRPRLPGATLFFTVALADRTSDLLVREVAALRWAVMRTRA ERPFRVDAWVVLPDHMHCIWTLPAADTDYSMRIGHTHPSGRVRSAAHPTQSLP" gene complement(1498908..1499813) /locus_tag="SKA53_07631" CDS complement(1498908..1499813) /locus_tag="SKA53_07631" /EC_number="2.1.1.148" /note="COG1351 Predicted alternative thymidylate synthase" /codon_start=1 /transl_table=11 /product="thymidylate synthase" /db_xref="CDD:17159" /translation="MPITPDQQAEIDTLRAQPQPTLRATAPGMEAHLYNAYDVLDHGF IRVIDYMGDDAAICQAARVSYGRGTKSVQNDEGLIRYLMRHWHSTPFEMCEIKLHVKL PVFVARQWIRHRTANVNEYSARYSILDREFYIPAPEHLAAQSVINNQGRGEALSGDEA ARVLAYLKDDAARCYDHYAEMISDEGQQGLARELARMNLPANIYTQWYWKVDLHNLFH FLRLRADSHAQYEIRVYAEEICKVVADWVPAAYGAFEDYRMGGATLSGKAIDCVKRML KGEEVTQETSGMSKGEWREFMGVIG" gene 1500053..1501489 /locus_tag="SKA53_07636" CDS 1500053..1501489 /locus_tag="SKA53_07636" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12402" /translation="MMHLWLRHGQALSEPVVTFIARKLTGLVLAVCVTGSAISAQTSI DLSLQEARDLARQALFAGDSALALDLARAVLSQEPDDRAAWILVAAAAPQQGDTATGR RAGARAFALSQSDEHRYEAARLTALAAAEEERFILATYWLRRALIVAPNDAERAQTRA DGSVIRRLNPWSFDLSASLVPSSNVNGGAAGGVAAAPGTPTGSLSDDAQALAGWRGAL GLGATYRLQESPTSRILIGTQYQGARIRITEAVNVPDEALATDKITFNLRHDRALGIG SIGAQLSYAMVDYRDLDNVTLQTEVQKFDVWQFDIDRRLPLGDRSDISVMAGRSWTSY DQALISDVVRTTFGAAYGYGLQNRDQINASISYADAAGGNANYTSTEWTAQISYTRAD PIGPVSLSISGGASKADFPDYSIGPFTVAGGRQDTTLFYGATIGFPAVSYAGFTPVLN ITGSNTDSNVTRFTRDSLSAGITIQSEF" gene complement(1501633..1501704) /locus_tag="SKA53_t08874" tRNA complement(1501633..1501704) /locus_tag="SKA53_t08874" /product="tRNA-Thr" gene 1501791..1501940 /locus_tag="SKA53_07641" CDS 1501791..1501940 /locus_tag="SKA53_07641" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDSKDSKPQPAKPAATREERLKAALKANMAKRKAQARARDAGAD KQKKD" gene 1501946..1503211 /locus_tag="SKA53_07646" CDS 1501946..1503211 /locus_tag="SKA53_07646" /note="COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /db_xref="CDD:10634" /translation="MDSILVKGGAALNGKIQIAGAKNAALALMPATLLSEEPLTLTNA PRLSDIKTMTALLQSLGVEVTSMQNGKVQVLSSHAMTSTRADYEIVRKMRASNLVLGP LLARHHQAIVSLPGGCAIGARPMDIHVTALETMGATIELKDGYLHATAKGGLKGARVA LRFASVGATENVLMAATLAKGTTIIENAAREPEIVDLAQCLRRMGAQIEGEGTSTITI QGVDRLGAATHPVVTDRIELGTYMLAPVFAGGAVECLGGRMDLVASFAEKLAEAGVDV SETPDGILVKRNGSRAKAVNVTTAVFPGFPTDLQAQMMAMLCTAQGTSVLEEKIFENR FMHAPELIRMGAKIDVQGGTATVQGVDRLKGAPVMATDLRASVSLILAGLAAEGETLV SRVYHLDRGYEHVEEKLRAVGANIERVSA" gene 1503208..1503669 /locus_tag="SKA53_07651" CDS 1503208..1503669 /locus_tag="SKA53_07651" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTQDASFRDGADKPLRLRAMDADDLAVIAAITQDAVFPVSEMRW DRKARRFALLINRFRWENGRQQPERVQSVLAFEDVMAVQSQGIDKADSDLVCSLLSIS FVPTADGAGRVELMLAGDGAIALNVEALEAVLRDVTQPYAAPSGKAPTHPD" gene 1503738..1505045 /locus_tag="SKA53_07656" CDS 1503738..1505045 /locus_tag="SKA53_07656" /EC_number="1.1.1.23" /note="COG0141 Histidinol dehydrogenase" /codon_start=1 /transl_table=11 /product="histidinol dehydrogenase" /db_xref="CDD:6256" /translation="MPQFLSTTDPDFEARFIALLGAKREDSPDVDHIVAEIIADVRAR GDQAVIDLTSRFDRLDLTPDTLRFTPAEIAAECALVSDEDRAALELAAARIRAYHSRQ MPDDASWTDDTGATLGWRWTPVSAAGLYVPGGLASYPSSVLMNAIPAKVAGVARLAIV VPTPDGVTNPLVLMAAQIAGVDEIYRIGGAQAIAALAYGTQTIPPVDKITGPGNAFVA AAKRRVFGKVGIDMIAGPSEILVIADRDNDPDWIALDLLSQAEHDESAQSLLITDDAD FGRAVAAAVDARLQTLERRAIAGASWRDFGAIITVADMDEAVALSDRIAPEHLELCTA DADALAGRITHAGAIFIGSWTPEAIGDYIGGPNHVLPTARSARFSSGLSVMDFIKRTT LSRMTPGALAAIGPSAERLAKSESLQAHGLSVRARLDRLNRGS" gene 1505047..1505526 /locus_tag="SKA53_07661" CDS 1505047..1505526 /locus_tag="SKA53_07661" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11797" /translation="MTRIVNIILDDSGLPAPTPEIDQERKVAMFDLLEDNSFAMPPRD DRAVPEGPFKLGLSIREKRLVFDIQLEDGTPAGAFHLSLGPFRQVVKDYFQICASYFD AVKTLPPSQIETIDMARRGIHNEGARVLQERLEGKAVVDNDTARRLFTLICVLHFGG" gene 1505516..1506010 /locus_tag="SKA53_07666" CDS 1505516..1506010 /locus_tag="SKA53_07666" /note="COG0394 Protein-tyrosine-phosphatase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10268" /translation="MGADVGDTGTYARLPQSVLFCCDHNSVRSPMAEGIMKKLYGKRC YVQSVGVKNDMEIDGFAITVCAEIGVEVSRHRSRSFDEMEQWGDDLSSFDLVLALSPA SQRRALDLTQFFHLDVEYWPIIDPTGMGDSREARLALYRQARDQIHDRLVARFGPATD DPSA" gene 1506117..1506335 /locus_tag="SKA53_07671" CDS 1506117..1506335 /locus_tag="SKA53_07671" /note="COG0361 Translation initiation factor 1 (IF-1)" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-1" /db_xref="CDD:10235" /translation="MAKEELLEFPGVVKELLPNATFRVELENGHEIIAHTAGKMRKNR IRVLAGDKVQVEMTPYDLTKGRINYRFK" gene 1506387..1506992 /locus_tag="SKA53_07676" CDS 1506387..1506992 /locus_tag="SKA53_07676" /note="COG0424 Nucleotide-binding protein implicated in inhibition of septum formation" /codon_start=1 /transl_table=11 /product="Putative Maf-like protein" /db_xref="CDD:10298" /translation="MTTLPPDTGLKLILGSGSPRRLELLAQLGVVPDAVRPPDIDEDV RRAELPRDYVKRIAMEKLAAMVADDDTVVLCADTTVALGRRIMGKPRDAGEAAEFLYA LSGRRHKVITAVAVKRGTRTWLRDVQSTVAFKQLSDAEVNAYLASGDWQGKAGGYAIQ GPAGAFIPWINGSYTGIVGLPLTETAGLLTAAGYSLYKDAL" gene 1506989..1508023 /locus_tag="SKA53_07681" CDS 1506989..1508023 /locus_tag="SKA53_07681" /note="COG1530 Ribonucleases G and E" /codon_start=1 /transl_table=11 /product="ribonuclease, Rne/Rng family" /db_xref="CDD:11244" /translation="MKGRSIILDHVNGLEAAAYLVDGKLDDLLIDQTDAPRPGAIYRA ICDRPIKGQGGMMLRLPDGDTAFLRAGKGLRQGQALLVQVTGYAEGSKAVPVTDRVLF KSRYAIVTPGKPGLNISRQIVDEDIRDNLLAIAHAAHEGEHGLILRSSCETADPTEIA EDITAMLDLADAVLADADGDSPEALTEGDSPHVLAWRDWTGASEIVTVPGSFASHGVL EQIAALGQALVPLGEGQMYVEPTRALVAVDVNTGSDTTPAAALKANLAAARALPRALR LRGLGGQISVDFVSMSKTHRKQVEQSLRAAFKNDPVETSLVGWTPMGLFELQRKRERL PLPADLLRRL" gene 1508023..1508205 /locus_tag="SKA53_07686" CDS 1508023..1508205 /locus_tag="SKA53_07686" /note="COG3024 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26150" /translation="MACPICNRPTDKAYRPFCSRRCADVDLGKWLTGSYAIPAGRDDA EDDDPDLAEDGDGKLH" gene 1508280..1508351 /locus_tag="SKA53_t08870" tRNA 1508280..1508351 /locus_tag="SKA53_t08870" /product="tRNA-Phe" gene complement(1508742..1510700) /locus_tag="SKA53_07691" CDS complement(1508742..1510700) /locus_tag="SKA53_07691" /note="COG1215 Glycosyltransferases, probably involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="putative cellulose synthase catalytic subunit protein" /db_xref="CDD:10933" /translation="MNFDLSAFAPIILILGLYLLVAPLLPVKKTWARSSVAIVCVLLG LRYVYWRLNSTVLPYDEQFGIEFIWIWFVFIVEVAIYIEAVVFFLIMSRYKPRHEEAD AGEAALIARGVYPPVDVFIPTYNEPPEVLEKTIVGAAGIDYPNLTVWVLDDGKRDWLC GMCETEGARYLTRPDNSHAKAGNLNNALLYAEGDFIAIFDADFVPHRNFLKRTIGLFD DPEVGIVQTPQHFFNQDPIQFNLDLTKDWPDEQRLFFDKMAECRDAWGVAFCCGSCSV TRRAALRAAGDQYPTESITEDLLTTLKLSRAGYKTRYLNERLSMGLAAESLEGFFVQR ARWCRGGIQSIFLPDGPLGPGIPLLNRLLFFPWSWLIQYPSRFVIMIIPIVVLWTGLM PLHFTSIEELIFYQFPVFLTYYLFMRWMLPYHYMPVLSTAQSWFATFRLLPTVLSSII KPFGVPFRVTPKGNLNNTEGFDALTFFFILIFIVLTVLGVIVNLFPETDILEAVQFFP VALFWAGLNIITLLLALLMCFDAPRKRSEERFDADEDTVLHGDGSAIVRVCDLSLNGC RVSYSGLDNIAQIDIEGVGLVAAKTLRHFPWDNPTYTSLKFIHTPETRRALIRKLFGG GYSNAVKQVFTGTVIGKLFRRMFGPPLT" gene complement(1510711..1511790) /locus_tag="SKA53_07696" CDS complement(1510711..1511790) /locus_tag="SKA53_07696" /note="COG0845 Membrane-fusion protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11279" /translation="MTSPINGFVHGAPQEAGRWIERDELLFTVANENQNRSFLNELLT ERRTLAQRIDAFTVQAEDLQQLMTQLGVNVYQYQRFTSDRIEHEIARLEADRAARQAA LSSVRSNLSRQQQLNDNGYARDVEVEDLTFQVQGLEAEISSIAAQVRVLEADQAGLRA GTFVGIGRNDVPYSMQRADEIRILLADIAARLSEDRTRIAEIDREILIEQEQLARTER FEVRSPMPGVLWRSYIYPGAAVPSENELIVIADCETLFVDAAVSNRSVNTVMPGMQVS VRLVGSSMQFDGIVSNVYGGASMLALDRTQAAVLIDVEASEIVARIAIDISELPQLRE NACYIGRQVSVEFPKQTMSFLRDMF" gene 1512350..1512625 /locus_tag="SKA53_07701" CDS 1512350..1512625 /locus_tag="SKA53_07701" /note="COG2963 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGTGRTDEFRKDAVRIALTSGLSRRQDSDDLGVGLSTLNKWVNA HRDTDVVSAEDRELARENERLRREIRILKEERDILKKATQFFVSQKP" gene 1512820..1513479 /locus_tag="SKA53_07706" CDS 1512820..1513479 /locus_tag="SKA53_07706" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="IS3 family element, transposase orfB" /db_xref="CDD:25582" /translation="MTEELKEVGVDVGHRRVGRLMRENGIVVERTRKFKATTDSNHMF NIAPNLLDRDFTADRPNQKWAGDISYVWTREGWLYLAVILDLHSRRVIGWAVSDRMKR DLAIRALKMAIALRSPPKGCIFHSDRGSQYCSHDYQKILRERGFKVSMSGKGNCYDNA AVETFFKTIKAELIWRRHWETRRQAETAIFQYINGFCNPRRRHSALGGKSPLAFERQV A" gene complement(1513559..1514086) /locus_tag="SKA53_07711" CDS complement(1513559..1514086) /locus_tag="SKA53_07711" /note="COG3915 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13226" /translation="MTSSMYIDEKRINDMPLKKYLIGFVSLVLLGGTLPSGAISAMEL TIIFDNSAGQIIMTDDQLQAMEQVEIITDTPWTKTPMTYEGPTLWSVLEQAGAIGREF EMIALNDYSIRLAADRITPDWPIVARLQNGKTMSVRDKGPYWVMFPFDQNKDLQTETF FALSIWQLAKIRVID" gene complement(1514249..1514653) /locus_tag="SKA53_07716" CDS complement(1514249..1514653) /locus_tag="SKA53_07716" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="integrase, catalytic region" /db_xref="CDD:25582" /translation="MALVIDTFADRSVGWWVSRSAKTDFVLDAREQAPHDRKPVQKGG LFHYSDRGGQYLSIRYTERLAEAGIEQSIGSVRDSFENALAETINGLYQTDSVHRQGL WRHMLDLEIALLGWVYSFNNRRLLGPIRNIPP" gene complement(1515077..1515418) /locus_tag="SKA53_07721" CDS complement(1515077..1515418) /locus_tag="SKA53_07721" /note="COG2963 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="ISPsy21, transposase orfA" /db_xref="CDD:23225" /translation="MMVITKSDMANRHSPEIRARAVRIVFKHQGSYETQVGAIAAIAL KIGCIPQTLSGWVKQAENDSAMRDGVTTEERNRIKMLERENRKLRQTNEILRKGLACF AQAELDRPLKP" gene 1515833..1517035 /locus_tag="SKA53_07726" CDS 1515833..1517035 /locus_tag="SKA53_07726" /note="COG2199 FOG: GGDEF domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:28314" /translation="MKHFHDRIAPPKVTSTQTLWRNFSERLIGIVVFVIGLALITSFA LRIGYVKQQVETLVSADRDQGLWTATQIQVELLEFEKLTHVAKSSPDTFENEVRTDFD ILYSRLSQVLEPNIAIVFYEEGVSSIPTEIIDIRDQMAAIIDLNDNLNVQELEKLASF ASNANHLWKSSIGLVLQENREYKVLVRQQMVETLKSVQSQLWMAVAISAALQLLVILI LILRVKYQKARNHNLKDSLTGCASRAGLQYALKNSFNRTKSGFSVAVVDVNNLKMVND KFGHKAGDLVIQSVGSALNKVSRGIDCTARIGGDEFVLLLDASVEQSELILERAREHL EKLSNTENFKKLEMQISFGVAYCPQPSQFNDAMSLADERMYRQKNAERKNKHSVIRLP PDNNIVGV" gene 1517070..1517525 /locus_tag="SKA53_07731" CDS 1517070..1517525 /locus_tag="SKA53_07731" /codon_start=1 /transl_table=11 /product="transposase (class I)" /translation="MEGTIMGQVRRGSATTTHVVTAAIYLSQTSLAQLSRELGIDPKT VAKWRKRSTVEDLKTGLKKPRSTALIEAEEAMIVAFRRHTPLPMGDCLLALQPSIPHL SQTALHRCLQRHGISRLPDVEGDKPRVRVYVDFDEKYFNIYVLKCIRGF" gene 1518143..1518817 /locus_tag="SKA53_07736" CDS 1518143..1518817 /locus_tag="SKA53_07736" /note="COG2200 FOG: EAL domain" /codon_start=1 /transl_table=11 /product="Putative diguanylate phosphodiesterase (EAL domain) with GAF sensor" /db_xref="CDD:28313" /translation="MKIISDRSFQNVYQSIVDLTTGKNVGLEALTRFEDVLFVSPDSV FREAERCGLKSELEIAVLHEPIKRTHEMSGDCYVSINVSPVTVATKAFKDLVATAATD HLVIELNEADTVDSYFALNDHLNRIRELGISLAIDDVGSGYANFRHILELSPEILKLD ISLIRDIDTNRKKQALAAAITAYADEFGSKIIAEGVETEAELQILRKLGISLIQGYLL SKPAPW" gene 1518814..1519257 /locus_tag="SKA53_07741" CDS 1518814..1519257 /locus_tag="SKA53_07741" /note="COG0168 Trk-type K+ transport systems, membrane components" /codon_start=1 /transl_table=11 /product="potassium uptake transporter, transmembrane component, TrkH" /db_xref="CDD:10043" /translation="MTALVVIIIVGLIGGCTASIGCSIKIFRWLPLAEAIKAQLKIIS SPHAVVNAKLGGQKFSDDVMSSVIAFFTLFILSFGLLTIALGQTSLSLKTSITATWTP IANVGPAFAPEIGPTGAFDAFPTPAKWLLTFGMLLGCLEILLVFV" gene 1519441..1520685 /locus_tag="SKA53_07746" CDS 1519441..1520685 /locus_tag="SKA53_07746" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="site-specific recombinase, phage integrase family" /db_xref="CDD:27730" /translation="MVALKPDTHVLLDGAVKAYKRGNSRLWQATFKIDQHWVRISTGK QDLEEAKIAARDEYLEYRFRSKHDLPVVTKRFEDVARLAIVDMQRQLDAGAGRKVFKD YITALHRYFIPFFGKTFITSIDHDRIQAFNAWRVTVIGHEPKASTLNTHNSAMNRVYA EAVSRGFVMQAKVPILANNGEGAQRRPDFSLADYRTMIRKLPYWIEQGKGGKSRDMRE LLRDYVLIVANTGMRPGTEDQNLRWKHVTVFTENQLDYVEFYLAGKTKPREAIGRSGT IDYLRRIHARTDAIKHIPFEIMLKQKLDLPVFCLPDGSVTEHLRQTFKAFLTASDLLT CPKTGENRVLYSLRHTYATFALVNDGMEIHALAKQMGTSIGMIEQHYSHLTPRMKKDM FTGRRFVPESEYRALGQVDGDE" gene 1520927..1521514 /locus_tag="SKA53_07751" CDS 1520927..1521514 /locus_tag="SKA53_07751" /note="COG4430 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13648" /translation="MRNEAMDQEKFAKVEITNADELWEWFAKNHAQDESIWLVTWKAV NRDKYTTRDQVLDALIAYGWIDGRRLKLDDDRTMQLLSKRKQQAWAASYQIRARKLIE DGRMTEHGLAAIEEAKASGKWDEMAHVDALQEPEDLITEIRAWRANEWWSTAAQSYKR NVLRWIAGAKKPETRAKRVTIVAEHAGRGEKVPQY" gene complement(1521640..1522110) /locus_tag="SKA53_07756" CDS complement(1521640..1522110) /locus_tag="SKA53_07756" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27723" /translation="MVSFYAGLRAKEIAALTVGNVFDETGAVREQFILSAAQSKGGQT RTVYLNQRLRRALVDYGDTIKLMDPQQALFASQKGGHFSANTMCQLFLDIYKACGLKD ASSHSGRRTYITRLANKGVGVRLLAALAGHAHISTTQRYIDVNSDQLSQAVELL" gene 1522569..1522901 /locus_tag="SKA53_07761" CDS 1522569..1522901 /locus_tag="SKA53_07761" /note="COG2916 DNA-binding protein H-NS" /codon_start=1 /transl_table=11 /product="Histone-like protein of HNS family" /db_xref="CDD:25626" /translation="MSDFNLDSMSLAELKQMHKEITKAISTFDDRHKAEARAQVEALA KEFGFSLAELIGKNKKSSRTYIAPKYQHPENSSLTWSGRGRKPQWFHEALASGKTPED LAVAGAAN" gene 1523278..1523862 /locus_tag="SKA53_07766" CDS 1523278..1523862 /locus_tag="SKA53_07766" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKMINRRIASVLFSAALLGGVLAPALAEQPIEGRAMIEDFTMQP ETRWRFFTDQVMGGISTGSVAFAQENGQTFARMTGRVSTANNGGFIQMRLDLTTPPPD SATGVRIVVRGNSQDYFVHLRTAGTLLPWQYYQAKFSVTETWSEVRLPLAAFTASGAF LRGVPRVSSLASLAVVAYGRDHDALIDVQQIEFY" gene complement(1524157..1524429) /locus_tag="SKA53_07771" CDS complement(1524157..1524429) /locus_tag="SKA53_07771" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDCRVVVTQGIQSLGEVVTAEILAAVQSFDAFTADNDPYAEHDF GKITRAGTDVFWQFSYYDLDFSMHSPDPTDTAITARVLTIMLAEEY" gene complement(1524476..1524934) /locus_tag="SKA53_07776" CDS complement(1524476..1524934) /locus_tag="SKA53_07776" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTHLAKLTFKTVSKSILRDPVIARRDKVIAALEEQALVLAAALE GKDHIKLRSKWMINDQGERVLVKTQRRVKPWFFAQDGGWYVQCRYGARVIAADGKNNA LFVNALKDVTVVLEALTSAAAAGELDAVLAKTALRQPTVKPGAARANADG" gene 1524950..1525087 /locus_tag="SKA53_07781" CDS 1524950..1525087 /locus_tag="SKA53_07781" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLYTYNANIKSAIEVDDRKDGIIWQKDLISQRHGVNRSNAHKKS V" gene complement(1525396..1526013) /locus_tag="SKA53_07786" CDS complement(1525396..1526013) /locus_tag="SKA53_07786" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTFAQRRQERTTLMANLLEQQWDVFGTLKFVNGRSIGRTTAHKL LCSYWNKVDRVFFGHAAERQGVRVPRWCFAHEGSDTENFHIHFLLQSPIADPEQACMA LNAIWAQHHVQAAPLAKNWITPVISRCDAVDYCTREYWRMGSATWLDEISWERTTFAE MAKYEHDAQRQRIERAASPIWLRQAYEELQAQQAAYAADDGNLVA" gene complement(1526086..1526577) /locus_tag="SKA53_07791" CDS complement(1526086..1526577) /locus_tag="SKA53_07791" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTSQDALLFWFLRFSDGFDLKKALIKSLDSEPQSEAISAEYDDS HVRFEEDHKQFNKLTTLMMIEGFPTHFGLLTADATIRLTLHESLVAKYGSAQVLHKLL KSIKTAERTQFQGMLADNSTVKTVKAKTTCAQKYLDMCSIDRIRLMRYYDFVCSQNSK SVS" gene complement(1526820..1527119) /locus_tag="SKA53_07796" CDS complement(1526820..1527119) /locus_tag="SKA53_07796" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDKRTLMLELKGLSRVIDADVRHLITKRRVIAELSDSYEPQNPF FSLLDDVEDTLSEAVQRKIFENLSAEERSAFLADWRKMPPHEQLRYLDDYIGAAT" gene complement(1527112..1527345) /locus_tag="SKA53_07801" CDS complement(1527112..1527345) /locus_tag="SKA53_07801" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTGYIKDMHIEFKLFELYGLREVIAAAQSRKVAQSDFVALAETV LSEGQARAFAARWPTLTQAEQTQVCTMLEKDHG" gene complement(1527342..1528040) /locus_tag="SKA53_07806" CDS complement(1527342..1528040) /locus_tag="SKA53_07806" /note="COG0470 ATPase involved in DNA replication" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11962" /translation="MTFVERHRPRSVQDLVFADPTVAAIIDRYAYRRPTKPLLLYGAP GTGKSEALRLIAQTQFAQAGLEIEDFTLNGAEYDKAIFNKILNMAQIQMWPRGTPAII VIDEIDEFEDKLPGKTRTFVEQHKSVQLLASTNYIKKIKPALQSRMRCVEVKKPSNAN WVPRAHAILTAEGATVSHNDVQQLMQNFTGDARDFIDYLEEQVDTARHFHGAGGSQLH RSATSSSHAVGGTL" gene complement(1528108..1528896) /locus_tag="SKA53_07811" CDS complement(1528108..1528896) /locus_tag="SKA53_07811" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSDTNYKVQLEQTLDQISAARAVWEEGTLKSSNDELYAILERCF EIYKQMKEDTAKRRSLNSLLTDRNMKPRTSTSLGIKVIRYVFGKEGNREQAFARLLTI AYDLKPAEQSLASYIQQCGGVEEVRRTSKVKDGKTMTADDYKQIAVMGLNMARIPVAS FNLPEFIQPNSEYDEDYVVGLIRCNPDGTGDLLFGNNDAKVIDTVLVASGKYLDQKAQ DDQKGLQVADVAKRRTEDVRSFAPKLFASMSPKLHINGLAVPAE" gene 1529394..1529840 /locus_tag="SKA53_07816" CDS 1529394..1529840 /locus_tag="SKA53_07816" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQVQIDVSLGAEAVERSLKELHMQLLFPERVALHRSAAVYPVAR RPVLVNLHRHIAVYKWRRRYPEMKDEEIADRVGLHAAEQANGISRSYMQRLGHSTGDI DIELRRAKRKAVQHDLRCARELIDGVSRGEFPVRTSGRTACKVNNP" gene 1530534..1530734 /locus_tag="SKA53_07821" CDS 1530534..1530734 /locus_tag="SKA53_07821" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRSDCVPAVCLNMLPWLRSLIVSRRFVMMRLRVTLRLYGARLTG WQYELLVQNGVQRDLPRNPFCR" gene complement(1531230..1531481) /locus_tag="SKA53_07826" CDS complement(1531230..1531481) /locus_tag="SKA53_07826" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MITLHSQDGQHFLGLRTGREGGYEIVYDCGLQRRRFVLLIKTAQ VDARYFRMQLEDAIQTVDVLTTLSAALRNAAIEFETDYD" gene 1532092..1532196 /locus_tag="SKA53_07831" CDS 1532092..1532196 /locus_tag="SKA53_07831" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MHQKAIAFSIMLVNIALGPTGQMRGRLLKVEAYY" gene 1532199..1532264 /locus_tag="SKA53_07836" CDS 1532199..1532264 /locus_tag="SKA53_07836" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRKRDQFVFEYIAIPVAPKPA" gene 1532396..1533019 /locus_tag="SKA53_07841" CDS 1532396..1533019 /locus_tag="SKA53_07841" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27384" /translation="MTVAFRKQGNQWQAVTLLGPMPGLNLQVQADGCWSGRFVPGVLL SYPFQLSPDCTTLAFWPDYTPEIAGIKGVEPLFVDGQLSTVLAAALAFLQVQQQAMNR LGLVLSWLAQRNLLQAWQIPEVVETPHLARYTGLFAVDRNRLEALDEADWFALHRIMP VSTVLTVVNAHLSSLDHARVFNLHSSDMGLASVRHINPDMRPRDGEL" gene 1533252..1534985 /locus_tag="SKA53_07846" CDS 1533252..1534985 /locus_tag="SKA53_07846" /note="COG2202 FOG: PAS/PAC domain" /codon_start=1 /transl_table=11 /product="Serine/Threonine protein kinase and Signal Transduction HistidineKinase" /db_xref="CDD:13748" /translation="MINLPGKIYLTWADAAFLEIIEHPCVPVVGELGDLVHPDNRASF DDALQSAAQIHAATVWQGRMHTKSAIKSVRISLTPPDTDDPEQPWTGVLQDLSDVMDL QSRFESVLDAAQAYTWRRDMRSGQSQFGIRWAQFAKHEDGRTSMSSDDWLARLHPDDV PAVRAAVQALERGDLDHHTLLYRRKLEDGNWVWLRVHAGVSERDGEGIPTALSGVSFD ITSEIEQQQRSDLLNQELRNELSDTQAALERTAYEITENIPVGTYTMVLMPGDDLAQF RFMSRRFLEITGLDEELARADPLIGFTCVHPDDYDVWVQKNTHAFVNRAPFREETRLL VQGQIRWVLAESIPRLRDDGAWVWEGVIQDITSQKISEQAMRRANKKLLKFADTKARL AERESLLQDIHDGFGNQLAIGKIRLRDSAGSTDQAVKIIDDCLDDLRLLFDSLDAEGE TLWTVLASLLERTVSRTRSLPVTLDWQIDAARRIKLPARVMLQAARIVQEGLANALRH ADAQSISLIVRVERGQRLIILKDDGCGFEVDQTSTGRGLNNMRARAEEQGWQLTISSD STGCCVTLDMG" gene complement(1535013..1535405) /locus_tag="SKA53_07851" CDS complement(1535013..1535405) /locus_tag="SKA53_07851" /note="COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /codon_start=1 /transl_table=11 /product="two-component response regulator" /db_xref="CDD:11904" /translation="MSRKSLISALRAGANGYVLKDATPTELTINIKHTLAGRSPISPA LTADIISDLLEIKYPTHDPDEKLTKREIELLERISEGLSYAKCANEMGLQLSTVHSYS RALFRKLGINSKSQAVLEAQKFGINPRR" gene 1535558..1535650 /locus_tag="SKA53_07856" CDS 1535558..1535650 /locus_tag="SKA53_07856" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKHLNPPKMLNLFERFFKALLELKFVFNN" gene complement(1536117..1536200) /locus_tag="SKA53_07861" CDS complement(1536117..1536200) /locus_tag="SKA53_07861" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPASLLSNEHLQAFFAVICMVTPKNAA" gene 1536528..1540163 /locus_tag="SKA53_07866" CDS 1536528..1540163 /locus_tag="SKA53_07866" /note="COG3210 Large exoproteins involved in heme utilization or adhesion" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MATALGLGACRSSEGSTEGTTTTVSGFAIKGPLDDFRVFIDGNL NGIYDAGEAVAISDTDGAFSLQAPAGQTLHGEVTSTTIDAASGRVIAGHFAAAPAGAT IMSPMTTVLAQTTLSETELRQALGLSVDLLSYNPFDAANISTTAARDAEHVAQQLANI TRAITGLGQGAGLDARPAFDIASGALNTVLVQHVTQNPNIEMDMWGDMTIGAVMSAYR AGLEAAGHSTTVLDALQAEIDSAIDIVNQRILAVGSLTSTEARAVFGLPSDLYDQIKD AATAIANGEANPGLSLDTWAGLEQQLAENGFVPPPPGPPAPPAPVGAAPVFTVNNPTD TFTVQSDIDATLEVTGGGVLANLVGGNAFTLVQQGAVTTGTLFARANGQTSAVSAQTF TLGTAGNVTIDTTGASNRVDFILGGDGNDNILAGSGNDHIIGGAGNDTLDGGAGVDRI HAGDGDDIILGDNDDVSLDGGNGTDTLRLFASFTSNRDISQMTSIEVITLMADSLTLD MRGVFEAETLNGFATGASTIIGGNANETITGGMGNDNLDGGNGDNILDGAGGNDTLTG QLGHDTFRITAGTDTVNRFMGSDVVVVSAGATAIVNVAQEFTATNASRNNGGAAANAR FNVDTLNVDFANFSAMTVVDAVTEGIDIRGAAAVGGLGTSIITGTNGNDTIEGFSTVN AGAGDDTVTGAAGNSTITGGAGADTLAGGGGNDTFVFGATDSASVPGAGTTDATGSDR ITDWNAGDLIRVTGQVASGFNVGTHVLVGLVDPFTPGANGAVIFAQNFVNTTYLVAMD GNLADGDGFDIAVDVTNADTTAAFTNAAAARAATQFDVTLADGGATVVLGANADTLVG GNGADNITGGGGADTLTGGAGADTITGGAGADTLIGSAGDDIFLIGAAGKGEGSHHEL GEIIDGGEGNDTVRFVSTKPNDTLQLTADVKVETVAISDAHGSTVGTSNSNIDASNMI NTEHVILIGNNGANQLTGNAGNNTIIGGGGNDLIRGGPGDDNLSGGAGSEDFIFNLSD TGVNRITDFQVSVDDIILEVTGLSDRDGVAVAADTINNLSFDSIDNIDFGTANLGSGD VIVEVLTDSRFGFSSGLAINLDFATSTPNEIVTAVEAVFAGNNWGGDGQAAYIESANS EDLLFIMYEAAGEGDTQDAVLIRATGDGVADSFDGELSLNGILLNVAANSLSAVDFTN VFAIEFG" gene complement(1540529..1541206) /locus_tag="SKA53_07871" CDS complement(1540529..1541206) /locus_tag="SKA53_07871" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator QseB, putative" /db_xref="CDD:10613" /translation="MTTIALIEDNEDLRNYTALFLEQNGYTVVQCEDAESYLETNTTV GLFIIDLNLPEMDGYSLVKSIRASDPGAAIIILSARDWDGDIVKGYELGADIYLTKPT NPAVLLSTVRRLTQRHAGLNAEHIGLSVNRVTQVMHFDQASCPISGSELAILYRLSIA GARGLERFEMAEVLNLDLDQGSRKAIDVRIVRLRKKLASLGCAKSTLETMRGYGYRLN LPMRITS" gene complement(1541260..1543107) /locus_tag="SKA53_07876" CDS complement(1541260..1543107) /locus_tag="SKA53_07876" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="two-component sensor histidine kinase" /db_xref="CDD:10512" /translation="MPVTVLLKHLILSFVGTLIVLFSTVMAVAETAHIEINYVIGDYE IEEIVSQKNVTFSKFDLGKNLGFKDKPVWFRINAQTDNVVDGQHLIITPVHIDNIQVF ANSVHGYEKILNAGDRETSPISMIPEGYSVTLTSYQLDAPIYIEIASKNVIYPSFKIV GFNEARHLAITSVFWFSLSFGITLLYFAWATSAVVSSPQLLLLTFILRLAMFSGALFV HSGMWRFLTSLESLPPQDLIHNVTGLAYITVAQLFDFALLRTIYCKTAIKAFLIMVLL SALAKTVFFISGEVSLALIVNNISALLTLLLGAMMVVLPRQNKIDTSKIQLSRTAVGA YFILQAIPLILLFILSYFENSNYLRISDIMFMNYALVPGGFIAYAMLKHQQRTYRANT ELELRAQHFIELSLLEQEKRSEMKRLLETLAHEIKTPLATLQMAEAVGRIDQKILQKS TDSISTVLNQISRVEHIERGAFVLETTEIDLCSLIKNVLKSVDSSANIECMDIKVNAD WNGLYIVLSNLVGNGEKYKKPKTQVSITIEKLSDSIDVLIKNALSRPILEPDRLFEKY YRDTTNANQPGTGLGLYLAKYLTHAFGAELKILKSDDEFVMRLSFSSGM" gene complement(1544275..1544766) /locus_tag="SKA53_07881" CDS complement(1544275..1544766) /locus_tag="SKA53_07881" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, ATP-binding protein" /db_xref="CDD:10284" /translation="MKSHQAAAAGIALVPEDRRIIAGLTVEENLQLAQIAPPKGWSLD RIYDLFPRLGERRKQEGVTLSGGEQQMLAIARALARDIKVLLLDEPYEGLAPVIVQEI AKTLGVIRDQGITTVIVEQNAVAALKLADRAVILDTGSVVFDGSAAEVLENSDLRAQY LAI" gene 1544770..1544970 /locus_tag="SKA53_07886" CDS 1544770..1544970 /locus_tag="SKA53_07886" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQGFVIKPNLSMSQFGITKPRYCSKRGCFTCAIPAKKSKNFAFM DTKTYVLDDITFAVIRLDLPQT" gene complement(1545064..1545822) /locus_tag="SKA53_07891" CDS complement(1545064..1545822) /locus_tag="SKA53_07891" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, ATP-binding protein" /db_xref="CDD:10285" /translation="MGILEIKGVNKRFGGLKALDDVNLSIAENTTHAIIGPNGAGKST LLNVLVGKLIPDSGSVTFDGQSILGRQPHEINQMGISRVFQTPEIFGDLSVFENVMIP CFAKRDGAFRMHAYESIFAEKAIQQQAEEILADVNMLEKRHMIASSLSRGDKRRLEMA MCLVQNPRLLLLDEPTAGMARADTQNTIALLKEIREKRSITMAIIEHDMNVVFSLAER ITVLAQGTPLVEDTPDNIKGHPKVREAYLGEAQV" gene complement(1545835..1547031) /locus_tag="SKA53_07896" CDS complement(1545835..1547031) /locus_tag="SKA53_07896" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, permease protein" /db_xref="CDD:13442" /translation="MFGLESKDGKLLLLVAALALLAPVILNPFPEGSAMSQFNAGYPD LMQRFVIFGILAIGFNILFGLTGYLSFGHAAFLGVGSYAAIWSMKLVTMNIIPSIIFA VIVAGVFSLVVGYISLRRSGIYFSILTLAFAQMSYSLAYSVLTPITGGETGLQIKSTD TPLLDKALEAGEIGRANLFGYGMGSSYQLELAGWQFTFNLGYYVAAVVMLISFYFAIR IFRSPFGMMLRAVKSNQQRMNYAGLSPKPYTLAAFVISGMYAGLAGGLLVAMDTQVGP ERMFWTASGEIVIMVILGGAGTLLGPVLGAGFIKYFENIISKINESILQGWFAFLPDG LQDFMVAVVYPFIGKGWHLTLGIMFMLVVIFLPGGLIQGGQKIGSWLRRKKNVVAKDS TTKPAE" gene complement(1547036..1548067) /locus_tag="SKA53_07901" CDS complement(1547036..1548067) /locus_tag="SKA53_07901" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, permease protein" /db_xref="CDD:10430" /translation="MDQIIVQVLNGLDKGSAYALIALGLTLIFGTLGVVNFAHGALFM LGSFCAVTFSRLLSFSHEVIDETRTDFLGNPLKVQVPYIQDWLGPDLAASIIQWSVPL SILFAIPVMITIGLIIERGLIKHFYKRPHADQILVTFGLAIVLQEIIKYFFGANPIQT PAPPAFNGSLDFGIWLGFDPVTIMYPYWRMIYFFFSVVIIAGVFAFLQFTTFGMVVRA GMADRETVGLLGIDIDKRFTFMFGLAAAVAGIAGVMYAPIVAPNYHMGMDFLVLSFVV VVVGGMGSLPGAVAAGFLLGILESFASMPMIVQSFPGINQIIIYLVAIIILLTRPRGL MGRKGVMEE" gene complement(1548158..1549372) /locus_tag="SKA53_07906" CDS complement(1548158..1549372) /locus_tag="SKA53_07906" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, periplasmicsubstrate-binding protein" /db_xref="CDD:10552" /translation="MPLTGAYADEGADELRALQLAVEHLNGQGDGGMLNTFSSKALDG TGILGREVRYVSGDDQTKSDVARATAQSMIQKDGAIMITGGSSSGTAVAVQALCQEVG IVFMAGLTHANDTTGKDRKANGFRHFFNSYMSGAALAPILAAQYGKDRKAYHLTADYN WGYTTEEAIRSSTEAMGWETVNTVLTPLTQTDFSSYIAPVLNSGADILVLNHYGGNMV NSLTNAVQFGLRDAQANGKNFEIVVPLYSELMARGAGANIAGILGSQNWDWKLEDQLG SKYSGTNAFVQSFGAKYGFPPSQAAHTCYVQTLLYADAVTRAGSFAPCAVDEALADFE FDGMGNGPTLYRSADHQCFKDVIVVRGKENPENEFDLVEIVEVTPVDQVTYDPEHPQF AGGALGNCNNGA" gene 1549878..1550099 /locus_tag="SKA53_07911" CDS 1549878..1550099 /locus_tag="SKA53_07911" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MCSGGIIPAMRLKMAAYALQVYSFKNEAITITVALQSQTSAGWL LLLVMWRICAAIKGIIPPGTICCNTDQRP" gene 1550184..1550762 /locus_tag="SKA53_07916" CDS 1550184..1550762 /locus_tag="SKA53_07916" /note="COG0386 Glutathione peroxidase" /codon_start=1 /transl_table=11 /product="glutathione peroxidase famly protein" /db_xref="CDD:10260" /translation="MHIKAAKKLFILSKRICVGIMVAFLVVTGSASMALDRDTPFESI YGGTLTLSQWEGQPVLVVNTASLCAFTDQYRDLQALYDRYRDAGLVVLAVPSDDFNQE LASNAEVKEFCELIYGLDMPMTIITSVKGRDAHPFYQSLRKETGFTPRWNFNKVLLDG EGNVVDTFPSQINPLSDEITMQIDRVLADLSG" gene complement(1550917..1551249) /locus_tag="SKA53_07921" CDS complement(1550917..1551249) /locus_tag="SKA53_07921" /note="COG2863 Cytochrome c553" /codon_start=1 /transl_table=11 /product="Class I diheme cytochrome c4" /db_xref="CDD:12215" /translation="MRFPYSAALCGTLVFLALADQAVADAATGRDLSRGCAVCHGANG IGTAPNNPNLAGQTEFYLIKQMQDFRDGRRENEQMSIIAETLTDEEIRSLAAWYSSIK ITVELPAK" gene complement(1551322..1552497) /locus_tag="SKA53_07926" CDS complement(1551322..1552497) /locus_tag="SKA53_07926" /note="COG2133 Glucose/sorbosone dehydrogenases" /codon_start=1 /transl_table=11 /product="putative Glucose/sorbosone dehydrogenase" /db_xref="CDD:11841" /translation="MQRTASAFTMIEQGGATAASLNEIVPFVNVPDGFEASLYAVVPD ARSMAVAPQGTVVFVGTRKDKVWSVVDRDRNRVADQVMDFAPSIAFDIPNGPCFSPDG FLYIAERNRVLQFPAAEFFFEGPDVAVSTVVAQGELIPVEEESFNHTARVCRVGPDGM LYISLGQPHNVQPVEKLALYDEIGIGGIIRIKTDGTGREVFTRGVRNSVGHDFNPANG DLWWTDNQVDGLGDDIPPGELNRQTEAGQHFGFPWTNARYEIPDYRNVARPEGVEFVE PQVEMQAHAADLGMSFYKGSSFPEAYHGGIFSAQHGSWNRTDPVGATVMFTRLDADGN AAGTEVFADGWLNEETGEYRGRPMDIAFLPDGSMLVSDDFAGAIWRIAYVGDGAASN" gene complement(1552954..1553157) /locus_tag="SKA53_07931" CDS complement(1552954..1553157) /locus_tag="SKA53_07931" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDGATHIPDTQCRRAALIERSSYLGNDGHRMAHLSITIIKFFFP HPNEFCVLICLSDGQKNDVQSYI" gene complement(1553430..1554596) /locus_tag="SKA53_07936" CDS complement(1553430..1554596) /locus_tag="SKA53_07936" /note="COG3748 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:25054" /translation="MAWIGASFYFIALDLMLRPSPDLPDGAYGEEWEVHGGGFYHTIK YSVAPSQLPAHLTWHKWQSYTTWLSGAGLLMIIYWVGGELYLLDPTKANLSLWQGILI SGGSLAIGWIAYDQMCKSRLGDRPTSLMLVLFALLVLMSWGYNQLFTGRAALLHLGAF TATIMTANVFFQIMPNQRIVVADLKAGRVPDAKYGKIAKLRSTHNNYLTLPVVFLMLS NHYPLAFGTHYAWIIASLIFLTGVTIRHYFNTMHKTGKGPHWTWAITIILMVLIAWLS TYKIDESWEDAEARPMSAQEERFASAAGFDEAYNAVIGNCSMCHAREPVWGNMRWAPK GVFLETPQDVARHAEKIYLQSGVSHAMPPPNAVQMSQEARELIVNWTQNVRHFQ" gene 1554882..1555694 /locus_tag="SKA53_07941" CDS 1554882..1555694 /locus_tag="SKA53_07941" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /db_xref="CDD:10453" /translation="MEEHLGVRLFQRTTRNLTPTEQGQSFYRGATEILEAVETAEAKI VNLTENLKGSLYVAAPLGVGRRLIAPQVPIFLKDYPGVSLRLRLSDRKVDLTTEGLDL AFFLGQPVDSNLRIRKIADVRRILCASPEYIAQRGMPENGDDLVSGRHECLNLRFPGA KEFQWLLSTPTGPRRFRVSGRYESDDGDVLTDWAIAGNGVAMKPVFEIAEHLQAGTLV AVAQQNPPEPTQMACLFTHRRMQDPKTRLFMEFMIGRIATSIKATDQLYLAT" gene complement(1555691..1556044) /locus_tag="SKA53_07946" CDS complement(1555691..1556044) /locus_tag="SKA53_07946" /note="COG2351 Transthyretin-like protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:23029" /translation="MAGYLSTHVLDTALGRPARGLKIELFRLDANTRSLINTLFTNDD GRTDAQILPAPDFATGIYELVFHVGAYLDATGVAPEAPRFLDAVPIRFGMSEDSHYHV PLLLSPYGYSTYRGS" gene 1556195..1557607 /locus_tag="SKA53_07951" CDS 1556195..1557607 /locus_tag="SKA53_07951" /note="COG0726 Predicted xylanase/chitin deacetylase" /codon_start=1 /transl_table=11 /product="polysaccharide deacetylase family protein" /db_xref="CDD:12533" /translation="MTRYPRDLTGYGNDLPTAHWPGGAKIAVQVVLNYEEGSENNILH GDDASEAFLSEMTGATPWPRQRHWNMESIYEYGSRAGFWRVHSLLRHLPITVYGVATA LARAPQQLAAMQQAGWEIASHGLKWVEHKDMSVDDERLQIREAIRLHTEVTGQPPRGW YTGRCSMNTVALAAEEGDFLYIADSYADDLPYWISTGGKDQLIVPYTMDCNDMRFAIQ AGFTNGDQFESYLKDSFDMLYAEGQTGQAKMMSIGLHCRIIGRPGRAMALKRALDYFK QHDGVWFATRAQIADHWIKHHPPKRHLQPSAMDRQVFVTAFGDVFEHSPWIADKAYDL ELGPTHDNALGVHSALARVFRSAGEKQRLDVLMAHPDLAGKLAAAGSLTPDSTAEQAG AGLDMLTDAERATFTTLNETYMSKFGFPFIIAVRDNSKASIMAAFQRRIDNDRATEFQ EACRQVERIALLRLQQKFAQ" gene 1557604..1558089 /locus_tag="SKA53_07956" CDS 1557604..1558089 /locus_tag="SKA53_07956" /EC_number="3.5.3.19" /note="COG3194 Ureidoglycolate hydrolase" /codon_start=1 /transl_table=11 /product="ureidoglycolate hydrolase" /db_xref="CDD:9674" /translation="MTDIIYIQPLTAASFAPFGDVIEASGHPDRMINAGMCRRFDDCA QLSFADGRAGISVFDAKVRKLPMTLDLMERHPDGSQAFLPMTQNPFLVVVAPDEDGIP GRPVAFETQPGQGVNYHRNVWHGVLAPLYEPGLFAVVDRVGAGANLEEHRFAHDITIM K" gene 1558199..1559563 /locus_tag="SKA53_07961" CDS 1558199..1559563 /locus_tag="SKA53_07961" /note="COG2233 Xanthine/uracil permeases" /codon_start=1 /transl_table=11 /product="xanthine/uracil permease family protein" /db_xref="CDD:11939" /translation="MPPLTKAIPLGIQHVLAMFVANVTPAIIVCGAAGFGFGSNSPDF PQMIYMIQMCMFVAGVATLFQTIGIGPVGARLPIVQGTSFAFIPIMVPLVAGKGVDAI AVLMGGILVGGLFHAVLGLFIGRLRFALPPLVTGLVVTMIGLALVRVGIQYAAGGVPA IGTPAYGSGISWLMAATVIFVTLGLKFFARGMLSVSAVLLGLLAGYALAFALGQVNLG NIGRAANFAFPNPLHFGLEFTFASIIGFCAMAFVSAVETVGDVSGITKGGAGREATDK EIQGATYADGLGTAVSGLFGALPNTSFSQNVGLIAMTGVMSRGVVTIGAIFLIACGLL PKVGAVISSIPIQVLGGGVIVMFGMVTAAGISMLSDVHWNRRNMVIFAVAISLGLGLQ LEPGALQHLPETVLVLATSGILPAAVIAIFLNLVLPQTLANEATEEVSGGMAGKGTGS LKQE" gene complement(1559767..1560582) /locus_tag="SKA53_07966" CDS complement(1559767..1560582) /locus_tag="SKA53_07966" /note="COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12593" /translation="MTSTYYAPQGGQPGQDQLLTDRAVFTNAYAVIPKGTMRDIVTSF LPFWSQTRLWVLSRPLSGFAETFSQYIMEVQHGGGSDNPETDPRAETVLFVVEGTATL EVNGAIYELTPGGYAYLPAGRKWRLHNQHPQTLRFHWIRKAYEAVSGLDAPDVLILNE NDIVPTPMAGTDGKWATTRFVDPSDMRHDMHVTIVTFEPGAVIPFLETHVMEHGLYVL EGKAVYRLNSDWVEVEAGDYMWLRAFCPQACYAGGPGQFRYLLYKDVNRHMTL" gene 1560926..1562158 /locus_tag="SKA53_07971" CDS 1560926..1562158 /locus_tag="SKA53_07971" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="D-amino acid dehydrogenase" /db_xref="CDD:10534" /translation="MVERVEIAVIGAGIIGLGCAFRLAQAGHEVALVDPQDPGSGASY GNAGTIADYAVMPVGSPAVLRDLPRLLFDRSSPLAIRHAAILSLAPWLLRFVRQSLPA ATARNAAAIAQLVMDAAAMWQDLATEIGAVDILQKRGALYVYDTPNAFRAATQDMIQR RALGVSVDLVAAHEMASLEPGLPAMHGGAFFPKAVFLSDPSAMVRQLARAVTALGVVH QRSSIARLEPQSDGIRLTGTGPALLASRVVIAAGAHSKNLARMAGDTVPLETERGYHL EWDMSAPRLSRPCCPTARGFYLCPMAGRLRVAGTVELGGLTAPPSPHRIKLLEQGAQA IFPDLGAPNRSWMGFRPSIPDSVPVIGTGRDSRVIHAYGHGHIGLTLAPITAQMVTAL VQGAPPDARIAPCRPDRF" gene 1562371..1562463 /locus_tag="SKA53_07976" CDS 1562371..1562463 /locus_tag="SKA53_07976" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MCFAFGFYADMLITKPTKIFTDRKQMETCE" gene 1562460..1562879 /locus_tag="SKA53_07981" CDS 1562460..1562879 /locus_tag="SKA53_07981" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MILKTTALAFLLLTPVMANAEPDLDCRIRLEFSSNDTGAVADYI LTLQIKNTLGRAISGVSVNYFDTALNQLGNTALACPGVFGEGIPPSSHGECWAQLQKV DGNLLEKFGTEMWTAIVNTQLTQLESIRKCKVLGFAY" gene complement(1563362..1563457) /locus_tag="SKA53_07986" CDS complement(1563362..1563457) /locus_tag="SKA53_07986" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIVTPPKARCQTQSENVILFLRLWSGSISCA" gene complement(1563504..1565639) /locus_tag="SKA53_07991" CDS complement(1563504..1565639) /locus_tag="SKA53_07991" /note="COG0513 Superfamily II DNA and RNA helicases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MITSALALAAGTASAQDMAFNRIASFATMLNNADNMAESSSEII SASDDGMTIVYSDSPLGVIGLIDIADPANPQPKGNIDMGGEPTAVSVIGNTAYVGVNT SESYTAPSGVLKAVDLATGAIIAECDLGGQPDSTAAAKDGSFIAVAIENERDEDAGDG RVGQMPAGFLTMIDVVDGTLDCATLRRTDLTGLAEIGAADPEPEFTDINALGEVAVTL QENNHIAIVAADGTLLNHFSAGTVDLEGIDATDERAALIFTQSVQDVPREPDAVQWID DNHIAIANEGDMDGGTRGFTVFHKDGTLVYDSGISFEYAAVAAGHYPDKRSDAKGVEP EGMEIATFGDTPFMFLLAERASLVGVYDMTDPANPVLTQLLPSGISPEGAVAIHARNL LVTANELDLVEDGGARSHVMIFEYQAAPAAYPTLTSAGADELIGWGAISGMVAGENGI VYAVNDSFYGFQPQIFTIDTTQVPARITAALDITRGGVPAQKLDIEGITTDGEGGFWL ASEGRTDRMIPHGLYHVNADGEIEKEIAFPAELLAVETRFGAEGITQVGNTLWIALQR NWKDDMGNDAKLVSYNLETEEWGAVTYPVDDTENGWIGLSEITAHGDYVYLIERDNQI GAQAAVKQITRVAVNELVPAALGGTLPVVTKEVVRDLIPDLATYNGYIVDKVEGLAIF ADGTAWVSTDNDGVDDSSGETFFWSVDLN" gene 1565831..1565923 /locus_tag="SKA53_07996" CDS 1565831..1565923 /locus_tag="SKA53_07996" /EC_number="2.3.1.86" /codon_start=1 /transl_table=11 /product="acyl-CoA synthase" /translation="MVARRPVKMIDMDPVLNNCLVDCTIQSLPG" gene complement(1566103..1567761) /locus_tag="SKA53_08001" CDS complement(1566103..1567761) /locus_tag="SKA53_08001" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="probable AMP-binding protein" /db_xref="CDD:10192" /translation="MTTNPYNIDLDRNPANHIPLTPLTFLDRAASVFPNHIAIVHGAL RRNYAEFYMRSRQLASALAQNGIGRGDTVSAMLANTPAMLECHYGVPMSGGVLHSVNT RLDASVIAFQLDHAMSKVVIVDREFMPLIEKALALANVTPRVIQYDDPEFPGPATATE AQDYNAFLSTGDPDFDWLMPLDEWDAIAINYTSGTTGDPKGVVSHHRGAYLLAQGNAL TTSMAKHAVYLWTLPMFHCNGWCFPWTLSAIVGTHVCLRQVRPEPIWAALADEGVTHL CGAPIVMSLIISAHQAEKRTFDHQVQFFTAAAPPPEKLLADMKTAGFDVTHLYGLTET YGPAVVNDWHHEWSDLPLAEQATLKSRQGVRYLPLEGLDVLDPETMLPVPRDGETMGE VMFRGNVVMKGYFRNPKATQQAFAGGWFHSGDLGVRYPDGYIQLKDRSKDIIISGGEN ISSIEVEEALYRHPAVKTAAVVAMPHEKWGETPCAFVELSTGADVDAATLRAWCKDWL APYKVPSMVVFMEIPRTSTGKIQKYMLREHAKTLAEQNNETKSC" gene complement(1567765..1568574) /locus_tag="SKA53_08006" CDS complement(1567765..1568574) /locus_tag="SKA53_08006" /EC_number="4.2.1.17" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /db_xref="CDD:10752" /translation="MSVMLTSDILLADLDAHGILRLTLNDQGRRNALSEAMLTTLRVA FEQASADPAVRVIVLAATGPAFCAGHDLKEMTAGRASDDGGKTYFAHVMSLCASVMQG IVTCSKPVIAEVRGVATAAGCQLVASCDLAIAADTAQFSTPGVHIGLFCSTPMVALSR SVASKHAMEMLLTGDMVSATRAAEIGLVNRVVVPDALHDATMQIALKIASKSSMTLAT GKRAYYAQREMTLGDAYDYASGVMVENMLAQDAHEGISAFIEKRKPEWQDA" gene complement(1568587..1568988) /locus_tag="SKA53_08011" CDS complement(1568587..1568988) /locus_tag="SKA53_08011" /note="COG1764 Predicted redox protein, regulator of disulfide bond formation" /codon_start=1 /transl_table=11 /product="OsmC/Ohr family protein" /db_xref="CDD:25924" /translation="MRTGVYSNEHTVQYNSRFDLPVDAAPDWGGDPANTNPEQALASA LSSCHMMTFLALAAKLDWPVASYHDYAEAHLGKNAKGQMSVVRIDLNPVVRFDTGFTV SAEDLAQMQGRAHRYCFIANTLADSVEINIH" gene complement(1569061..1570200) /locus_tag="SKA53_08016" CDS complement(1569061..1570200) /locus_tag="SKA53_08016" /note="COG0404 Glycine cleavage system T protein (aminomethyltransferase)" /codon_start=1 /transl_table=11 /product="aminomethyl transferase family protein" /db_xref="CDD:10278" /translation="MQADDFGFGTQIRKSPYFDATLRWGAKGFSVYNHMYIPRDFGDA EQNFWNLVNDAILCDVAVERQVEITGPDAAQFTQMLTCRDLSKMAVGQCKYILITNAD GGILNDPILLRLAENHFWISLADSDILLWAQGVAIHSGLNVTIREPDVSPLQLQGPKS GEIMKALFGEDILDLRYYWLREVELNGIPLVVSRTGWSSELGYEIYLRDGAKGDLLWE TIMAAGMEFGLKPGHTSSIRRIEGGMLSYHADADMTTNPFELGFDRLVNLDMEADFIG KAALRRIKDEGVSRKQIGLIIDGDPLAGPNTTFWAINLGGDTIGKVTSAVYSPRLKQN IALAMVSAEHANIGAVVEVVTHSGPTIATICERPFYDPKKQIAAA" gene complement(1570365..1570721) /locus_tag="SKA53_08021" CDS complement(1570365..1570721) /locus_tag="SKA53_08021" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator protein" /db_xref="CDD:11236" /translation="MKAAGYIRGYHADIALGQLADFAKVIVTVSLSRHRKADFDRFEA FINSRDEIIDCIATGGGVDYIMEVISPSLSAFQSLMEEFLAEDLGIDRYMTYFATRQV KSGMPNIAKLAAGNIK" gene complement(1571075..1571542) /locus_tag="SKA53_08026" CDS complement(1571075..1571542) /locus_tag="SKA53_08026" /note="COG2771 DNA-binding HTH domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LuxR family" /db_xref="CDD:11904" /translation="MAFFGFDVVADVAMHLQAGMSYASAELVHLIFETVAVLGLGYAV ITLRQYLRLLQVEAESSKETIHMLRGNFDEVLRDKFKEWSLTAAERDVTLLIIRGLSV ADIAAARNTAQGTIKAQSTSIFRKIGVGSKTELMSVIIDEFLDTSYHDGLSAQ" gene complement(1572399..1572512) /locus_tag="SKA53_08031" CDS complement(1572399..1572512) /locus_tag="SKA53_08031" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVSDKYEASHSGSDDRADRFATITFRKVFGYRKALVV" gene complement(1572609..1572725) /locus_tag="SKA53_08036" CDS complement(1572609..1572725) /locus_tag="SKA53_08036" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MATDLKQPDFIERAVTSGLSVAVAMAMIAPAACVSQSA" gene complement(1572760..1574643) /locus_tag="SKA53_08041" CDS complement(1572760..1574643) /locus_tag="SKA53_08041" /note="COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase" /codon_start=1 /transl_table=11 /product="dihydroxyacid dehydratase" /db_xref="CDD:25654" /translation="MPQQKNWKEAALTNPNAVLIDRHPGRSTQTLGLAKEIGTDPALI HEPSVGVVGTKGDSQCYLGVAAKVEAIHEAFRSRIGTGPDQLRFRLVQPEFTIATSDG MRNGTPEMRYSLIGREVTQDALCEHFSATGLAGTIAVVACDKPPVGTLAAMLEHNLPS IIMSDGPIHPGVDPKTGEKLDIVTAFQAAGHPDPEYRHHIACHACPGFGSCGGMFTYN TMQTFIGVLGMQPLHMVAPPSDDARRLTEFPDELVTLLAKMIETDLRPRDIVGRDSLR NATIVAMAIGGSTNALLHAPEIARAAGFAEFWKDIMTPEEFNHLSQHVVPVLTNARPY GKYSMVDIDQVGGVQVIVRELLEAGLLNGETMTCTGETLAEQVARLGAKQADGDVIYS VKAPFKPTGGLRMLGGNLSPDFSAILKLAGVEGGLENNLFRGKARVFDGQQSLLDLLD QTPEVLQDNDMIIVRYEGPSGAPGMPEMLDPTARITTLCRERGIVVALMTDARFSGGS IGLVIGHVGPEAALGGPIAFVENGDEILVDLNINQINCTPLNDPDILAARKRAWDDAV ASNGGFHPSLPAADTRLLQRARHMAVPAINGAGLHPHRTVWVRNPRDATPSGFAPHNK FRT" gene complement(1574944..1576002) /locus_tag="SKA53_08046" CDS complement(1574944..1576002) /locus_tag="SKA53_08046" /note="COG3329 Predicted permease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24855" /translation="MDVIWTIISSFLEQLQKPTLSFLIAGMVLAALGSKFEIPAPVYQ FIVILLLLKVGLGAGIAIREAEPMTLIVPALGAVVVGVLIVWLGGLTLARLRGVSQVD GLATAGLFGAVSASTLAAGMVMLDDSGQEYEAYIGALYPFMDIAALVTAILLARLAAA RNSGLAVQGGGALALHAGQGGVAVEQGSLVRHILVDTCRSPAISAMLAGLAIGFLARP DVVYHSFYEPLFRGLLSILMMIMGMEAWSRLSALRKVAHVYVFYGLTAPLIHGFIGFG VGMAAHHLTGFSAGGVVLLAVMASSSSDISGPPTLRAALPEANSSAYVGTSTALGTPT AILLIPLWIALAELVISG" gene 1576098..1576979 /locus_tag="SKA53_08051" CDS 1576098..1576979 /locus_tag="SKA53_08051" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator lysR family" /db_xref="CDD:10453" /translation="MINRLNYHHLRYFHEVAREGHLGQAADRLNIAQSALSVQIKQLE ERLGFDLFDRVGRKLVLTEAGRIALDHAERIFSTGDELLAALAQSGPSDPPLRIGALS TLSRNFQLQFLAPLLKPGACAFSLKSGSLRPLLADLENLALDVVLTTQVPPTGEGLVL AAQKIAEQPVRLHGRPDHLHHASLADLLAQEPLILPTEDVIRTGFENLVTALGVQPRI VAHVDDMAMVRLLARAGLGLAIAPTVVVADELASGMLATAPFDLGITEPFFAVTLPRK FPHPALAGLLRGLAGVA" gene 1577183..1578070 /locus_tag="SKA53_08056" CDS 1577183..1578070 /locus_tag="SKA53_08056" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="possible transporter, RarD family, DMT superfamily" /translation="MLGFCVTAPLLDVAAKLAADSVPVGQITAARFIGQCALMAPFVW IMGLSLRVAHGLWLALVFRAVLLLVSTFCFIAAISVMPLADALAIVFVAPFIVLLVGK YYFGEDVGPRRVWAALVGFIGVLLVIQPSFAAFGAVALFPLGTAVGFAFYILVTRGLS RRMHPVTLQFHTGLIASLMCLPVMVLAQGTGSSLLDPVWPEGIAWLWLFGVGFFATIS HIMMTYALSLAPSATLAPLQYLELPVATLLGYLVFSDFPNALTLTGITIIIGAGLYMI HRERVTASQLVSARAAPPI" gene complement(1578203..1578748) /locus_tag="SKA53_08061" CDS complement(1578203..1578748) /locus_tag="SKA53_08061" /note="COG0678 Peroxiredoxin" /codon_start=1 /transl_table=11 /product="Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Ma..." /db_xref="CDD:10547" /translation="MTPQSVPDAVFHTRVRNPDLAGDNPFEWKQLSTSDVFAGKRVVV FALPGAFTPACSESHLPGYERLYDAFVAQGVDSVVCMAVNDAFVMFQWAKSQNIQRVF MLPDGNGEFTRKMGMLVDRSAQGMGMRSWRYSMLVENGDIKKLFAEPGLRDNPPGVPM SVSSAETMLDYLQHHHQTSSV" gene complement(1578745..1578942) /locus_tag="SKA53_08066" CDS complement(1578745..1578942) /locus_tag="SKA53_08066" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MILRHTIRPVAKGHFLGRVLRDKKSWPNRAGPNPVLAEDGAAAG LSICLTTVSISANDVMRSNTK" gene complement(1578939..1579919) /locus_tag="SKA53_08071" CDS complement(1578939..1579919) /locus_tag="SKA53_08071" /note="COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="quinone oxidoreductase, putative" /db_xref="CDD:10474" /translation="MNTTRTVIFDAPGGPEVMKIVERPVGDPGPGEVRIRHHACGLNF IDIYQRSGVYPLALPHALGMEGAGVVEAVGADVTHLATGDRVAYAAAPPGAYCDVRVM KAAQVCRLPDSIDFRTGAAMMLQGLTVEYLFHRTVPLKAGDTVLFHAAAGGVGLIACQ WARALGIRLIGTAGSDEKCALAREYGASDVINYETEDFVARVRDITDGRGVDAVMDSI GKSTFEGSLDCLRPVGMMISYGNASGKVPPFDLGILGAKGCLQLTRPTIFVHIAEREK CQSMASHLFDMVESGKVKIHIGQDFAFENVAQAHREMEARTTTGSSVLTL" gene complement(1579916..1581436) /locus_tag="SKA53_08076" CDS complement(1579916..1581436) /locus_tag="SKA53_08076" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="malonyl-CoA synthase" /db_xref="CDD:10192" /translation="MSNLLYDVFFASQAGRSRPFLILPDGAQISGGEFLYMVHRVANA LVACGLQPGDRIAVQIEKSPMALAIYGGAVAAGVVFLPLNTAYPPAEIDYFVGNAMPK MLVADGRRAGALTPVAQAHDAQLMVLNADGSGSFADLVAAQSADFTPVARGVDDLAAF LYTSGTTGRSKGAMLTHGNLLSNAQVLTREWQFTDKDVLLHALPIFHTHGLFVATNVS LMSGGAMIFLPGLNMDDMIRLMPQATTMMGVPTFYTRLLDDPRFTASLTAHMRLFISG SAPLLAETHVQFEKRTGHRILERYGMTETNMLTSNPYDGERRAGTVGLPLAGVELRIA DPETGAALPQGETGMIEVRGPNVFQGYWQMPEKTAAEFRSDGFFMTGDLGLIDDKGYV NIVGRAKDLIISGGYNIYPKEVELVLDDMPQVLESAVIGLPHADFGEAVVAVLVATGQ APDIAEIENALQNKLARYKQPKAYIVVAELPRNNMGKVQKAALRKQYETKFKEAAL" gene complement(1581453..1582730) /locus_tag="SKA53_08081" CDS complement(1581453..1582730) /locus_tag="SKA53_08081" /codon_start=1 /transl_table=11 /product="putative decarboxylase" /db_xref="CDD:17669" /translation="MARSWGLGSWALGDLLGTLFERRAAADVTASGKPLTTLCWALLS GQGEVSGMKCAVEVLMRYRQASMEEKAAFFRFLADDMDLDPAAVIAAAQAYADKGDAG TMAALLDVAEPPRQELLRRLNQAPRGTADLVAMRVDLMEAIKAQPDLARVDLDFQHLF ASWFNRGFLVLRRIGWESPANILEKIIAYEAVHEIHSWDDLRRRLEPPDRRCFAFFHP SMPDDPLIFVEVALTQGIPGAIGPLLAEDRDALTPSDVNTAVFYSISNCQAGLRGISF GNSLIKQVVDVLGREEPGLKTFVTLSPIPGLCRWMDTQHDSVQLLPDVASDAEALRRV AARYLLQAKAADGQPLDPVARFHLGNGAELHEIHAAADLSSKGQNQSCGAMVNYLYDP ANVERNHEAFASKNTIAAARGVKALAVAAKDQK" gene complement(1582730..1584043) /locus_tag="SKA53_08086" CDS complement(1582730..1584043) /locus_tag="SKA53_08086" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11306" /translation="MDPLSLGLLVAVMTIVVLFSGVSVASGLLIVSAGFLLVFDGMRS LELMPEIFFGKLNSFALLSIPMFIIMGAAISSTRAGADLYEALERWLTRVPGGLVMSN LGACALFSAMSGSSPATCAAIGKMGIPEMRKRGYPDEVAAGSIAAGGTLGILIPPSVT MIVYGIATETSIGRLFLAGVVPGLMLVALFMAWSIFHTWRFGSPEVLAQRSYTLKQKL EILPRVIPFIIIIIGVLYAMYGGIATPSETAAVGALLCLVIAMVIYKLWSPKKLWTIL SDSTRESVMILFIIGAAGVFSYMLSSLYITQSIAAWISDLDVNRWVLMGIVNLFLLVA GFFLPPVAVILMAAPILLPIILAADFDPYWFAVILTINMEIGLISPPVGLNLYVINSI APDIPLKKILMGSLPYVGCMVLAIVILCFFPGIVTWLPDLVMGPV" gene complement(1584043..1584591) /locus_tag="SKA53_08091" CDS complement(1584043..1584591) /locus_tag="SKA53_08091" /note="COG3090 TRAP-type C4-dicarboxylate transport system, small permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12429" /translation="MATMPNTRAINTGDYTILRLIHKLSTVCGWISALMILASVLITC QMIFIRFVLESSTIWQTEAVIYLMVGATLLGLPYVQSLRGHVNVDLIPILVKGRARKY LAGFVLLMTMSVVGVILFFSIENWHFAWERGWRSETVWAPPLWIPYLALPLGFGIYLL QLLADFAALVLGVDRPFGLEDN" gene complement(1584682..1585623) /locus_tag="SKA53_08096" CDS complement(1584682..1585623) /locus_tag="SKA53_08096" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11350" /translation="MGISAASAVELRLSHQWSVGDVRHKVAEMIATDVAAAGVDLDIR IFPSESLLKAREQYNPLSRGQVDMIVYPLSYSGGQRGEYNLTLMPGMVKNHDHAARLN ESPFMAEIENLLAEDDIMVLVHGYLAGGFASTGACITRPEHVNGLSTRAAGKSFEEML AAAGASISSMASSEIYNAMQTGVLQAVNTSSSSFASFRLQEQVSCYTPAGDVALWFMY QPVLMNKSTFDGLNDAQKAALTEAAARAEAFYLAEAKAEDAASVAVFEAAGVEIAQMT QDDFNAWLELAKTSSYKSFVDNVPNGQALLDMALAVE" gene 1585810..1586499 /locus_tag="SKA53_08101" CDS 1585810..1586499 /locus_tag="SKA53_08101" /note="COG1802 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="regulatory protein GntR, HTH:GntR, C-terminal" /db_xref="CDD:11512" /translation="MNTRLADHVREALEQMIVTGDFADGERLDEIRLAERFNVSRTPL REAFQALAASGLVQLLPRRGAFVRHPAFHEIIEMFEVMAELEAVCGRLAARRVTPQTL EQIKATVIACECAAHAGDSDGYYRENEHFHQLVYIASGNDFLANEAQRLHKRLQPFRR MQLRVRGRMIQSLSEHRLILTALETGDSTTAEAGLREHVAVQGSKFNDLMASYKRSNL RAHSQLVSMRE" gene 1586672..1587589 /locus_tag="SKA53_08106" CDS 1586672..1587589 /locus_tag="SKA53_08106" /note="COG1226 Kef-type K+ transport systems, predicted NAD-binding component" /codon_start=1 /transl_table=11 /product="putative potassium channel protein" /db_xref="CDD:25532" /translation="MLPVQLRLLQILEKTKDGDRLSRQCDMLIVTMVILNISAVILES FSALYEAYSAWFHGFEIFSIAFFSIEYLLRLWANGARYPDSPSRGRREYAFSFYGLVD LLAILPFYLQLLMPGLDLRILRVLRLLRLLKLSHYSSAVEDLMQAIYDERRAFGAVGY ILAIVIIASSALMYYAEGDAQPDKLSSIPAAMYWSVISLTTVGYGDVSPVTAAGKVIS MLTAFMGVATVALFTGIMASSFNKQLVRRKVIFEQELRKAFADGVVTEHEEVLLQALK TRFDLTDELTSSLRERIKSETDRTKANID" gene complement(1587608..1589833) /locus_tag="SKA53_08111" CDS complement(1587608..1589833) /locus_tag="SKA53_08111" /note="COG0469 Pyruvate kinase" /codon_start=1 /transl_table=11 /product="serine protease" /db_xref="CDD:25387" /translation="MKKALCVVSLLVFAACNPEDRSADNHLGVTITPPVSRPFDDIGP TVGGDPFPWNRYFVTEFDQAALGAIRALPGYVANTFRFNLSVRDHPVYGGFGALVTAT PLAAARLDYALSTGLTGAGQIVSLIDSGVRLSHDQFEAKTIYSSGQPPTGGEFHGTAV ASVLVGNGQNGGMIGFAPGADLHQGHLNYNAPLNWHALGNHMRDAASIGAIASNNSWG IRDATVQNTDVGAFVRNTQTYISGLRTFAADGVIVFALQNDYHADSASLMAALPLGAA DLESSWISVINAIPSFNDDGVTSAVRISTACLETARFCMAANGQIKVATQWHDSGYAI GVGASFAAPQVAGSIALLAEAFPDLTAAQLRDRLLVTADNGFFAHDGVVTFAPGITHG YNAEFGHGFLDLRAALLPIGQAVVPLVDGGSIDLGSAAIMAGSAVGDSLAQSLAAVNI LTTDQMHGSFMVAGSVLAAAAIRADPAASALMAGLRSDMGAGRLKMHAAIRGGDTWAR DGTGWQDASGVDLLGGDAVALTAPGGDFGAAVLIGDAMAGVALHQSFDLGQAQAQVGV MIMQADGSILGIGAPPGVGNIRSVTHALHLDVATPLAVDTALRLSAEIGVAAGQGAGV LGAISTLVYDRVGMSVARADVGAKGDVLSVFVRQPIAITHGSARLDLPVQMSGNEIGF ASYDIGLAPAARQRDLGFEYRVPVFRSGDLSLGMMYSRNDGNITGQDVLSGFIGLQFG V" gene 1590130..1591113 /locus_tag="SKA53_08116" CDS 1590130..1591113 /locus_tag="SKA53_08116" /note="COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin" /codon_start=1 /transl_table=11 /product="zinc/manganese/iron ABC transporter, periplasmiczinc/manganese/iron-binding protein" /db_xref="CDD:27832" /translation="MSTQSVKARICGAAAAMAIMTPAFAQDAPLNVLTTVTMIADVAA NVAGDCATVTSLLGAGSDPHLYRPTAADVQKLSGADLILYVDPALEARLAEVLAGFTN RTPTIGLARASFDDSTLLGGAEDATQIDPHLWMDVSLWAQIAPVIADAIAAQRPDCAD DLTANVANYTAQLDALHMWVTQAITSIPQDQRLLVTAHDAFEYFASGYGITASEAIEG ISTESEASIGDIRDVAAFVAASGVPAVFVETTISPRTIEALVAEVQSQGHDVVIGGAL FSDAMGDDATPEGTYIGMIRANTVTVTEALGGTLPDWPEALDGWARDWSIE" gene 1591147..1591923 /locus_tag="SKA53_08121" CDS 1591147..1591923 /locus_tag="SKA53_08121" /note="COG1121 ABC-type Mn/Zn transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="zinc/manganese/iron ABC transporter, ATP-binding protein" /db_xref="CDD:10843" /translation="MMRDDTLHEPEQALHVEDLTVTYGANPVLWDIDLDIPPGVMCAI VGPNGAGKSTLIKTALGLVRPVAGHVRFLGRPIGQMRGQIGYVPQRHSVDWDFPTTAR DVVEMGLYRDLGWLRRPGKAEHARALAALAEVGMQDYADRQISQLSGGQQQRVFIARA LVQDAPILILDEPMAGVDASTEAIIIALLKKLRDAGRTVIVVHHDLTTVQSYFDWLVM LNVRIIAQGPVAQTYSADNLRAAYGRHLAMIAVPAAEAAS" gene 1591920..1593068 /locus_tag="SKA53_08126" CDS 1591920..1593068 /locus_tag="SKA53_08126" /note="COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components" /codon_start=1 /transl_table=11 /product="manganese ABC transporter (membrane protein)" /db_xref="CDD:4391" /translation="MTAIIDLLSSDIVQTVLIGAALLGAISGMLGAFAVLRRQSLLGD ALSHAALPGVCLGFLIAGGRDLGSVMAGAFGTGALAALIMMLIVRRTTLKTDAALGIV LSVFFAVGIVLLTVIQTQGGSGSLGLMTFLFGQAAAILRSDLWVMGGIGLAAILLVLA FWKEFKLVSFDTAFARAQGFPVTALEAVLTVMVALAIVVGLQLVGVVLMVALLIAPAA AARQWTKSLGGMVVVSAAIGAASGAGGALVSATTRGLATGPVVVLIATGIVMVSLLIA PGRGLIWQAAATQRARARISDGRVLATLQGFAQMHDDAGYPSERGMLQIALGAKPPAA TLASLESRGLIRSVMHPPETTPHWELTKAGHTEAAALSGEPETRQHTK" gene 1593065..1594195 /locus_tag="SKA53_08131" CDS 1593065..1594195 /locus_tag="SKA53_08131" /note="COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components" /codon_start=1 /transl_table=11 /product="zinc ABC transporter, permease protein" /db_xref="CDD:10830" /translation="MITAFFQSIPLMIVLTGVLTGISAALLGSFLILRGNAMLTDAIS HSIVFGIIVVWLLTGHTSGPVQVLGAAITGVLTVVLSELLARSRLVKMDAAIGLVFPA LFAAGVILISINARNVHLDVDSVLLGEIGFVWLNTVALFGVDVPVAVATLGAVLVVNL VFVLVLWKELKLATFDAGLAAALGFLPGVLHYAILTLTSVTAVAAFDAVGAILFIAFV VVPPATAYLLTRRLWLMVVLAVGFSVAACISGYFLALHWNVSIGGMMASMTGVWFTLA LLFAPAQGLVAQALRARTDRLDHDCRALVAHLFTHQDTPAMAEENTLRALVSHLRWTA PRARAAVLRAHDRDLIERRDGLLCLRPKGTAEVEAIFGRSNA" gene complement(1594192..1595049) /locus_tag="SKA53_08136" CDS complement(1594192..1595049) /locus_tag="SKA53_08136" /note="COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /codon_start=1 /transl_table=11 /product="fumarylacetoacetate (FAA) hydrolase family protein" /db_xref="CDD:10054" /translation="MKLLRYGQRGQEKPGCLDAQGRVRDLSAHVADIAAAGLLPDNIA RLQALDIDSLPIVEGTPQHDLRLGPCVGQVGKFVCIGLNYADHAAESGLAVPPEPVIF NKWTSAIIGPDDDILIPRGSVKTDWEVELGIVIGQGGAYIEESDAMAHVAGFCVINDV SERAYQIERAGTWDKGKGCDTFGPIGPWLVTRDEIADHDNLRLWLEVDGNRYQDGSTA TMVFKVPHLVAYCSQFMSLQPGDIISTGTPPGVGMGQKPQRYLAGGETMRLGIDGLGV QTQRVVNQG" gene 1595164..1595280 /locus_tag="SKA53_08141" CDS 1595164..1595280 /locus_tag="SKA53_08141" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAAALIPEIWIVRHCIVRPAVVGQTGVQCCGDEHISYF" gene complement(1595267..1597429) /locus_tag="SKA53_08146" CDS complement(1595267..1597429) /locus_tag="SKA53_08146" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10512" /translation="MVLGLAMIAATAYLFASLQDRRQVMLQSVREDAMWAVFQTNRQA SRLTQLVLEAQNNPTPDAIDAVLLGFDLLYSRIALLDRGVFSDSFQSSSELRIIEAAV SQEIYELAQMIDTIAGDRTAVEDALPLILAEAQKVNTTSNDLVIATNATLNEARVASR QQAFALYQRLAVAAGVAALVFICTILLQFLDLRIISQTQKQLRELSVRNSRSAAAAEA ASAAKSMFLATMSHEIRTPLNGIIGAADLLRTEDLDPAQSRRVLTIWRSGHVLLDIIN DILDYSNLDANGVTFNNAPVSLPDVAGLVHDVFQARIADAGLSFDIDLPAITIMTDEI RLRQILLNLVSNAIKFTPAGSVSVRGMLLAQDGLRIEVQDSGIGIASEDHSKLFRDFS QIEGSESRPFGGTGLGLAICRRVVTGMGGRIGVESAIGRGSVFWVELPVTVLGPAAPV AVRAIPVQPDVPRDIRVLLVEDNAINREVAAALLQSFGARVVTANDGSIALDLVQLAA FDIVLMDLQMPVMDGLAATRAIRALGIDLPIIGLTANAYAEDRQRCLDAGMTDFVAKP VTRDKLGSMLRGCMTLPKPVIEKPTAPMSDTMLDMAQLHLVLDELGPDLLCDLLDQLC KDAEAVARMVKAGADRPAPNRLDEALHMLNGAAMTLGLQHAGNHCETLRLHKTSDPAA LVDLVALIKQSTGAAQVAVRELAGDLRLTERQPVAKNS" gene complement(1597491..1597988) /locus_tag="SKA53_08151" CDS complement(1597491..1597988) /locus_tag="SKA53_08151" /note="COG3915 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13226" /translation="MKYLLFFVLSMSASLLQAAELPAPQGDVILTVSGNIAHTNGNGV ARFDRAMLQDLQQGSITTATPWFEGTHDFSGPLGAALLDAVGAQGATLRVVALNDYAA TVPASDLRDLNVVLATHLDGHLMSVRDKGPLFLIYPFDDNPDLFDEVYFGRSVWQIAK IDVGD" gene complement(1598013..1599059) /locus_tag="SKA53_08156" CDS complement(1598013..1599059) /locus_tag="SKA53_08156" /note="COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain" /codon_start=1 /transl_table=11 /product="Metal dependent phosphohydrolase, HD region" /db_xref="CDD:12768" /translation="MRVCIVDDEPISRSVIRAVLSRSEEYEVECFSDAISALARCRDV MFDLVLVDYRMPDMDGITCITHLRALADYQFIPVIMLTADHDRELRLSAVRSGATDFL NKPFDPDELRVRAQNLLSLRKAQLALMDRALHLDAEVRQATRKLAEREEELIWRLARA IELRDGTTQQHISRVAAVAEIIARTLGQSKAFCRTIYLAAPLHDTGKIGISDAVLNKP AALTDDERLEIQRHIEIGAEILKDGDSDLIRMAYDIALYHHEKWDGSGYGKGLAGTDI PLPARITAVADVFDALFSERPYKEAWSFEKAYAEILRQSGRHFDPRCVLAFTAGLTEI KKYYTDPAVTTHVA" gene 1599288..1600196 /locus_tag="SKA53_08161" CDS 1599288..1600196 /locus_tag="SKA53_08161" /EC_number="3.4.24.-" /note="COG0501 Zn-dependent protease with chaperone function" /codon_start=1 /transl_table=11 /product="heat shock protein HtpX" /db_xref="CDD:10372" /translation="MGYLKTAILMAAMTALFMGIGYLLGGAGGAVIALFVAAAMNVVT WWNSDKLVLRMHGAEPVTRGDPMGLHAMTAELARNAGLPEPKLYLIDTPQPNAFATGR NPANAAVAVTTGLLRDLTREELAGVIAHELAHIRNHDTAIMTVTATFAGAISMLANFA LFFGGSRERMGLIGTLALMFLAPFAATIVQMAISRTREYAADKAGAEICGNPLWLAAA LEKIAVGAARIDNHAAERNPATAHLFIINPLHAHKHDNLFATHPATQNRIAALRAMAR QDRPAPAAQPVRRGVPSTRRRSGPWG" gene complement(1600197..1601036) /locus_tag="SKA53_08166" CDS complement(1600197..1601036) /locus_tag="SKA53_08166" /note="COG1349 Transcriptional regulators of sugar metabolism" /codon_start=1 /transl_table=11 /product="probable glycerol-3-phosphate regulon repressor" /db_xref="CDD:11065" /translation="MRFDPPAQIDTPNPGKVRFMSQAERLRDIQVMARRDGRVVVEDL AAHFAVTMQTIRRDLADLADQGKLQRVHGGAILPSTVANIGYQDRRDLNEVGKAAIAL ACARDIPNGCSLFLNIGTTTEAVARALLKHRDIMVLTNNLNVANILIDNPHCEIIVVG GLLRRTDAGLVGTVTTQAIGQFKFDLAIISCSALDEDGDMLDYDIQEVGVSQAILRQA RRSFLVADHSKFARRAPARIGSLAQMDGFYTDAPLPPRLADACRGWHTAVTVAGQQGT TMA" gene 1601244..1602842 /locus_tag="SKA53_08171" CDS 1601244..1602842 /locus_tag="SKA53_08171" /note="COG0578 Glycerol-3-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="aerobic glycerol-3-phosphate dehydrogenase" /db_xref="CDD:10448" /translation="MAQSAQKSATIHDLLVIGGGINGCGIARDAAGRSLSVVLAEKGD LAGATSSASTKLFHGGLRYLEYFEFRLVREALIERETLLRAMPHISWPMRFVLPYHKD MRFDSDTPTSRLLGLILPWMKGRRPAWLIRLGLFLYDNLGGRKILPGTTTISLTDTPE GAPLDDRFAKAYEYSDAWVEDSRLVVLNARDAAARGATIMTHAEVVSAQATNGIWQVT VRTAQGDQVIAARMLVNASGPWAGDVIHGTLRLNSRENVRLVRGSHIVTRKLFDHDKC YFFQGTDGRIIFAIPYEQDFTLIGTTDADHDDSARAPVCTDAERDYLCDFASQYFKRP VTKDDIVWTYSGVRPLYDDGASSATAATRDYTLKVDTSAGAPVLNIFGGKITTYRRLA ESALDKIGATLPLSRGNWTAGVPLPGGDFPYDGVEALIADLRRGYPFLTDGWARRLVR AYGTEARDVLGKAANTTDLGRDFGATLTEAEVRWLITQEYAQSAEDVLWRRSKLGLRL NQNQVAVLEEWIASHSIEMMRAAE" gene 1602882..1603145 /locus_tag="SKA53_08176" CDS 1602882..1603145 /locus_tag="SKA53_08176" /note="COG3839 ABC-type sugar transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="ABC sugar (glycerol) transporter, ATPase subunit" /db_xref="CDD:13156" /translation="MDSVSKVVDGQNHIYPTDLRLQRGTLMRLMAGLDVPATGRVIWE GRDLTGMRVQDRKPLDGIRQMPGRALRPRSPWQSGPLAALPQS" gene 1603177..1604664 /locus_tag="SKA53_08181" CDS 1603177..1604664 /locus_tag="SKA53_08181" /note="COG0554 Glycerol kinase" /codon_start=1 /transl_table=11 /product="Glycerol kinase" /db_xref="CDD:10425" /translation="MGYILALDQGTTSSRGIVFGPDMRIVATAQEEFPQHYPASGWVE HDPSDLWASTAATARAAIEKAGLKAKDIAAIGITNQRETTLVWDRKTGKPIHNAIVWQ DRRTADFCAKLRADGHEDMITRRTGLLVDPYFSATKLKYILDVVDGARDRARKGELAF GTVDSWLIWNLTGGRSHVTDATNAARTMLYDIHKGRWSQTICDLFDIPQAMLPQVHDC AANFGHTRADLFGHEIPILGVAGDQQAATIGQACFQPGMVKSTYGTGCFVVLNTGDTP VASTNKLLTTIAYQLDGKPTYALEGSIFIAGAVVQWLRDGIKVIRAAPETQGLAETAD PSQDLILVPAFVGLGAPYWAPQARGAIFGMTRNSGPAEFARAALESVGYQTRDLLEAM QADWTRDAAEPSLRVDGGMAANDYAMQFLSDIIGAPVDRPQVLETTALGAAWLAGMRA GVWPDMDAFAKVWAVDRQFTPQMDAGDRDTRYARWGRAVNAVLAV" gene 1604664..1605782 /locus_tag="SKA53_08186" CDS 1604664..1605782 /locus_tag="SKA53_08186" /note="COG1454 Alcohol dehydrogenase, class IV" /codon_start=1 /transl_table=11 /product="Iron-containing alcohol dehydrogenase" /db_xref="CDD:11168" /translation="MIAPFGFATAGTIRFGRGVLAEAAPFAATFARVLLVRSASVMAA DGLARDLRQTCAVLDLIVKGEPDLPAITAHLATTRPFAPDLIIAIGGGAVIDYGKALA ALIPASHGALRYLEVVGDGKPLDAAPLPLIAIPTTAGTGTEVTRNTVIGVPEAGRKVS LRDPRLYPTLALVDPDLCLSCPKGVVLASGLDAITQVIEPFISARANPVTDAVCRDAI PRGLAALHRIMDHDDARAWDAMALTSLCGGIALANAGLGAVHGFAGVIGGRTGAAHGA ICGTLLVPVLQANLAATQADAAARITWVIDRITDEFGSLSDFDHWTRDHGLPRLAALG LPPETHAAVAREAKDASSYKANPVDLDMAALLDILARG" gene complement(1605825..1606169) /locus_tag="SKA53_08191" CDS complement(1605825..1606169) /locus_tag="SKA53_08191" /note="COG2351 Transthyretin-like protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:23029" /translation="MAGFLTTHVLDTAGGVPAAGIKVDLYRLDGDARVHLATMVTNGD GRTDSPILPAADFAVGRYELVFQAGDYFGRSDDPRFLDDIPIRFGINDPASHYHVPLL VSPFGFSTYRGS" gene 1606337..1607728 /locus_tag="SKA53_08196" CDS 1606337..1607728 /locus_tag="SKA53_08196" /note="COG1271 Cytochrome bd-type quinol oxidase, subunit 1" /codon_start=1 /transl_table=11 /product="quinol oxidase subunit I" /db_xref="CDD:10987" /translation="MMETLLLSRIQFAANISFHILFPTITIALGWVLLFFKIRYSQTG QERWMEAYRFWVKIFALSFAMGVVSGITMSFQFGTNWPGFMEKVGNIAGPLLAYEIMT AFFLEAVFLGIMLFGFRRVPNWVHTGATFLVAFGTLMSTFWIIVLNSWMHTPQGFEMR DGVAHATDWFAIIFNPSMPYRFAHMVLASFLTVSFLIAGVSAFRWLIGGRTEGVRVAL KTAVFTAALLMPVQIFVGDMHGLNTKEFQPAKVAAMEGHWETSGNVPLILFALPDQEA RENRFEIGIPNLASFILTHEWDGVVKGLNDFVAEDGTVLHPRVAPVFWSFRVMIGTGV AMLLLSWVASFMMLRRKRGVEGLPKPLLYALVGMSFSGWIATLAGWYTTEIGRQPWLV QGVMTTAEAVADVPAPMVLSTLISYLIVYGLLLTAYIYVIFYLARKMSRGEDIGTSIA PAPAAAPNAIPAE" gene 1607734..1608744 /locus_tag="SKA53_08201" CDS 1607734..1608744 /locus_tag="SKA53_08201" /note="COG1294 Cytochrome bd-type quinol oxidase, subunit 2" /codon_start=1 /transl_table=11 /product="putative transmembrane cytochrome bd-ii oxidase (subunit ii)oxidoreductase protein" /db_xref="CDD:11010" /translation="MNTFGDPTIWLPFVFAGLMGLSILIYVVLDGFDLGVGVLFPFAD DAEKDRMIATIGPFWDANETWLVLAVGLLLVAFPAAHGTILTALYLPVAIMLVGLILR GVAFEFRAKAPAPHKHLWNNAFFAGSLMTSLSQGFMLGMYIMGLEWTLVHAAFSLLTA VFLTVGYSFIGATWVIHKTDAGLQRKAVGWAKGGIWGLVLGIALVSMATPLVSTRIFE KWFSWPEALLLSPLPILSALLVFGLWSMLRRMPFMNDRLSWLPFAAASMLWVMAFVGM AYSFYPYVVPEKLTIYEAASAPESLFIILIGTLFVLPTILAYTVLAYTVFRGKATELR YD" gene 1608841..1608914 /locus_tag="SKA53_t08872" tRNA 1608841..1608914 /locus_tag="SKA53_t08872" /product="tRNA-Met" gene 1608984..1610396 /locus_tag="SKA53_08206" CDS 1608984..1610396 /locus_tag="SKA53_08206" /note="COG0277 FAD/FMN-containing dehydrogenases" /codon_start=1 /transl_table=11 /product="putative oxidoreductase protein" /db_xref="CDD:10151" /translation="MSVIDQITAAIGADRILTGKDAAPYGKDWTGAYTSTPLAVLRPM STAEVAAIMRIAHATRTPVVPCSGRTGLTGATMADSALMLSVERLNQITEINATGRTA TVGAGVILSNLHDATARHDLIFPLTLGARGSAMIGGLLSTNAGGSNVVRYGSTRGLCL GLEVVMADGRVMNLMSALHKDNSGLDLRNLVIGAEGTLGIITAAVLKLLPKPQAYATA MVALPSLTDALQLLHRLQDATGGGVEAFEYMPRSYMAKHRQMFPDMPPPFARDHDVNI MIEVAATTPRDAQPGPDGQLPVVTLLEDMLGQMLDDGTLIDAVIAQNETQRRAIWKRR EDAGDVAFFGGHFVNTDIALPLDKVAAFEAALTPRLRAIDPDVEEVMVAHLGDGNIHH TSYVSRNDPDAMAALVEAVEDVVQELGGSFSAEHGIGVSKLETMKRRKDPVALDAMRA IKAALDPHNILNPGKVIPPA" gene complement(1610380..1610481) /locus_tag="SKA53_08211" CDS complement(1610380..1610481) /locus_tag="SKA53_08211" /EC_number="2.5.1.61" /codon_start=1 /transl_table=11 /product="porphobilinogen deaminase" /translation="MIESAGRHCCDAKTDVMQGFGRALFGAMFMPAG" gene complement(1610483..1611427) /locus_tag="SKA53_08216" CDS complement(1610483..1611427) /locus_tag="SKA53_08216" /note="COG0181 Porphobilinogen deaminase" /codon_start=1 /transl_table=11 /product="porphobilinogen deaminase" /db_xref="CDD:25265" /translation="MNITLPTPASPFNIGTRGSPLALAQAHETRARLMAAFDLPQDAF AIVVIKVMGDAIQDRALKDIGGKGLFTREIEDALLDGSIDIAVHSMKDMPVEQPSGLL LDTYLPREDVRDAFVSLTARGLDDLEHGATVGTSSLRRRSQLLVRRPDLNVVEFRGNV QTRLMKLGNGVAEATFLAMAGLNRLNMTDVPRTAIAPEDMLPAIAQGAIGIERRADDS RAAAMLEAIHHGPTGQRLAAERSFLAHLDGSCQTPIGGLADLDGGTLRLRGEILRTDG SQVLADDMIGAIADGADMGREMAVKLLEKAGPGFFDHM" gene 1611426..1612556 /locus_tag="SKA53_08221" CDS 1611426..1612556 /locus_tag="SKA53_08221" /note="COG0407 Uroporphyrinogen-III decarboxylase" /codon_start=1 /transl_table=11 /product="uroporphyrinogen decarboxylase" /db_xref="CDD:10281" /translation="MARLLDVSIWPDNCLDNMFRNWDHRLVKKGQIMAQKKTILRALA GETLPTPPIWMMRQAGRYLPEYRATREQAGDFLKLCYNPELAAEVTLQPIRRYGFDAA ILFADILLLPQALGADLWFVTGEGPRLSTITTPEELGRLKPVEDIHETLNPVYETVKI LSQELPKETTLIGFAGAPWTVATYMIAGQGTPDQGPAHALKAANRPLFEGIMHRLTEG TIAYLSKQIEAGAECVKLFDSWAGSLQGDDFTEFSIKPMQRITAALKEKHPGIPVIAF PRGAGTKYAGVHAATGADCVAVDDGVDAAWVADHVQKDGCVQGNLASSHMVTGGQGLV DETRRICDALSGGAHIFNLGHGITPEADPANVQLMIDTVRGG" gene complement(1612715..1613593) /locus_tag="SKA53_08226" CDS complement(1612715..1613593) /locus_tag="SKA53_08226" /EC_number="1.3.3.3" /note="COG0408 Coproporphyrinogen III oxidase" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /db_xref="CDD:1766" /translation="MAEEFATQKAKASAWFRALRDDIVAAFEALEDSHTADTPAGRFE VTETSRHSDDGSDAGGGLMSVMRGGRVFEKVGVNISTVYGQLGDGAQRAMAARGVPGM ADDPRFWASGISLVAHMQNPHAPAVHMNTRMFWTPHAWWFGGGSDLNPCIEYAEDTAH FHATQKAHLDPHGLDHYPKLKAWADEYFYIPHRNRARGVGGIFMDDYCTGDWDADFTL TQDIGRAFLPAYVPLVETRRETPWTDADKDTQLIHRGLYAEYNLVYDRGTKFGLTTGH DANAVLMSLPPLAKWV" gene 1613708..1614079 /locus_tag="SKA53_08231" CDS 1613708..1614079 /locus_tag="SKA53_08231" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MILPFLVLAACATPREHCISQATRDLRVLNSLIAETQGNLARGY AIEEQQEIRTIRQTCRGENSDGTTFRYSCDETETFTTNRPVAIDLNVEGAKLSSLIER RNQQQTTSDQVVLQCIVAHPE" gene complement(1614080..1614883) /locus_tag="SKA53_08236" CDS complement(1614080..1614883) /locus_tag="SKA53_08236" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="7-alpha-hydroxysteroid dehydrogenase, putative" /db_xref="CDD:10756" /translation="MSFSISGKTAIVTGAANGVGLAIARHFAEGGANVVFADMDEKTL RAQMGEEAEKAKNIRLFAGDLRKKLTITNLLSATIDAFERVDILVNASRQVMTTDPLD PDDTSMDELLQQNMLTAMRVSQAVARRMIKQAGTGGGTTIGSIVNISSIASRRTHADL LAYSVSSAALDQLTRSLAVAFAQHGIRVNAVAFGSVMSASLKGSLKDDDEMRDAILEN TPLHRIASPDEVSDAVQYLASDAAGFVTGQIITVDGGRTLIDPACVSAH" gene complement(1614904..1615875) /locus_tag="SKA53_08241" CDS complement(1614904..1615875) /locus_tag="SKA53_08241" /note="COG2813 16S RNA G1207 methylase RsmC" /codon_start=1 /transl_table=11 /product="methyltransferase, putative" /db_xref="CDD:12167" /translation="MPQSRLSTAIQDGLLVLGAGHVGLMRPPASFDISDLPRDAVSVM HSYYPDVADWQIAGHTVTQDLAPCETAIVVVPRAKAQAQAMIAQACATASLVVVDGQR TDGVDSLFKACRKRLGDIASITKGHGRLFWFPATTAFADWAATGPVQGPHGFFTAAGV FSDGAVDAGSALLAQALPPKLPARMADLGAGWGYLAQAVLARDSVASLDLIEAEALSL QCARLNVTDPRARFHWADALRFTPDKAYDGIVMNPPFHVGRAADAGLGRAFIQAASRL LAPHGKLWMVANRHLPYEQAMSENFRNVDIIGGNNAFKLFHATKPTR" gene complement(1615901..1616257) /locus_tag="SKA53_08246" CDS complement(1615901..1616257) /locus_tag="SKA53_08246" /note="COG2127 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="ATP-dependent Clp protease, adaptor protein ClpS" /db_xref="CDD:3124" /translation="MTGHLMREQFHMMADKEDRDGGNLGVALETKPKTKRPPMYKVLI LNDDFTPMEFVVHVLERFFGLSHAQAFELMLTVHKKGVAVVGVFSHEIAETKVAQVMD FAQRHQHPLQCTMEKE" gene 1616504..1618069 /locus_tag="SKA53_08251" CDS 1616504..1618069 /locus_tag="SKA53_08251" /note="COG1686 D-alanyl-D-alanine carboxypeptidase" /codon_start=1 /transl_table=11 /product="Probable penicillin-binding protein" /db_xref="CDD:11397" /translation="MARRPGQLAHYGLYFCVLIFILIAAPIRGVAAPYAALVMDARTG EVLHARNADTRLHPASLTKMMTLYVAFQAIERGEISLDTEVTVTSHAANEPPSKLGLR AGQRIRLRYLIRAAAVRSANDAATAIGIAISGSEEAFATRMNQTAAAMGMSNTTFRNA HGLTQSGHLSTARDMSVLGRHVIYDFPQYYNLFSRRTADAGVATVQHTNRRWLDSYPG GDGIKTGFTNASGFSLVASAQRGDQRIIATVFGGTSTAARNARISELMDMGFSTAPRS ANVNRPTPPGAMAEAPADGSVAAGDSLRGSAGKVIRVNGLVTRSYRPVGRPVTAQPEP EMLLSATADTEVVVAAAADATPQVDVAANVDQDIINAVLADAVNAALMDVLAEQAPAQ VAEATPAVMPQARPEPPAEMQMAAMATVAPPAESFAPGEPEVVTRVSTSGGRHWGVNV GRYPSRFDAERVLLQVALNEMNTLDGALRRVVQRSGGFDANFMGLNREAADLACRRLQ ARGTTCFMIGADG" gene complement(1618136..1619740) /locus_tag="SKA53_08256" CDS complement(1618136..1619740) /locus_tag="SKA53_08256" /note="COG4172 ABC-type uncharacterized transport system, duplicated ATPase component" /codon_start=1 /transl_table=11 /product="ABC peptide transporter, fused ATPase domains" /db_xref="CDD:13438" /translation="MTQPILDVRDLRVAFRQDGTTTHAVRGVSFQIGRGETLAIVGES GSGKSVTALSTVQLLGDSAVMAGSITYNGVEMVGASEPALRKVRGNDISFIFQEPMTS LNPLHTLEKQLAESIELHQGQRGHGVRDRIIELLNRVGIRDPETRLGAYPHQLSGGQR QRVMIAMALANGPDLLIADEPTTALDVTIQAQILDLLADLKQRDGMSMLFITHDLTIV RKIADRVCVMQNGEIVEQGPTADIFANPQHPYTQTLLAASSTGLPAPVPADAATVLET DAARIWFPITAGLLKRTVGHIKAVNSATLSLREGETLGIVGESGSGKTTLALAVMRLI RSEGRISFMGRDIHTLTQRQMRPLRSDMQIVFQDPYGSLSPRMTVEQIIAEGLGVHGV DPGRNRRDMVAEIMAEVGLDPAMMDRYPHEFSGGQRQRIAIARAMILRPRLLVLDEPT SALDMTVQVQIVQLLRDLQQKHRLAYLFISHDLKVVRALSHKVMVMKQGDVVEAGEAN AIFDAPNHPYTRQLMAAAFEGRAIPA" gene complement(1619737..1620912) /locus_tag="SKA53_08261" CDS complement(1619737..1620912) /locus_tag="SKA53_08261" /note="COG4239 ABC-type uncharacterized transport system, permease component" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide uptake family ABC transporter, permeaseprotein" /db_xref="CDD:13487" /translation="MMRLSPLNQRRWRNFKRNRRAVWSLIIFGVLFGLSLFAELIAND KPILVSYQGDWRMPIVSFYSERDFGGDFPTQARYQDVEVQCLIKTGGMESCFDDPDGL IAAVDAGEDLGEGFQRGWMIWPVIPYSYNTIVDRPGVAPAPPSALNWLGTDDTKRDVT ARVIYGFRLSIIFALMVTISASIIGITAGAVQGYFGGWTDLAFQRFIEIWTGTPSLYV IIIVFAILGRSFWLLVFLTVLFGWPALVGVVRAEFLRARNLEYVRAAKALGVPDRTIM FRHMLPNAMVATVTMLPFLVTGAIGTLASLDFLGFGLPSSAPSLGELTLQAKQNLQAP WLGFTAFFTFAIMLSLLVFIFEGIRDAFDPRKTFIADGSVPVVTAQDLAVAQKAPVK" gene complement(1620909..1621991) /locus_tag="SKA53_08266" CDS complement(1620909..1621991) /locus_tag="SKA53_08266" /note="COG4174 ABC-type uncharacterized transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC peptide transporter, inner membrane subunit" /db_xref="CDD:13439" /translation="MGAYILRRLLLVIPTLLGIMIINFALVQFVPGGPIEQILANLEG RGDVFESFSGGGGDADFGADNGSEYVGARGLPPEFIAQLEREFGFDKPPLERFLNMMW NYMRFDFGDSYFRSISVFDLVMEKMPVSITLGLWSTLIAYLISIPLGIKKAVRDGTPF DTWTSGAIIIGYAIPGFLFAILLIVLFAGGSYYRIFPLRGLTSSNFADLSLIGKILDY LWHITLPVLASTISAFATLTLLTKNSFLDEIKKQYVITAKAKGLSESRVLYGHVFRNA MLIVISGFPALFIGVFFGGSLIIETLFSLDGLGRLGFEAAVARDYPVVFGTLFAFSLI GLVVGIITDITYVFIDPRIDFEARNT" gene complement(1621995..1623911) /locus_tag="SKA53_08271" CDS complement(1621995..1623911) /locus_tag="SKA53_08271" /note="COG4166 ABC-type oligopeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="oligopeptide/dipeptide uptake family ABC transporter, periplasmicsubstrate-binding protein" /db_xref="CDD:13433" /translation="MMSYRPKVRVMAQPQPDQALHMRLWAVGSIAAIALLAAHDARAQ TASNIIVSHGFNEYGDLKYPSDFPHLDYVNPAAPKGGEISISADGSFDSMNPFATLSG TPGSLSSVMYERMMDSTDDEVGSYYCLLCTTLEYPADQAWVIFNLRDDVTFSDGTPMT SQDVVFTHNLFAEQGTPSFRAGITQLVTGAEALDDYTVKFTFNPESPRRGRVSQMANT IVMPQDWFEESGARLDESRLNTAPGTGPYMVDSVDPGRQIIYRRNPDYWGQTHPINIG RANFDTIRVEYFADSSAAFEAFKAGEFTFRRENSSINWATSYDFPAIDQGWVVRDTLA DGTLPAATGFVFNLRREKLQDRNVRLALGLMYNFTWTNDNLQYGLFQQRSSFWENDRL RAAGQPAGRELEMLDTVRAMLPEAIFTEDAFMPHTSGDRPLDRDNLRRALDLMEQAGF TPGNDGMLRDADGRTLDIEFLETRQSFDRIITPYIENLQRLGVNATYNRVDPPQYQAR TQSNDYDMIFGAYSSGLQEGTGIEQKYGCEDRDDVFNPAGFCSAAVDALAKFVTGADD YEEMAAGVRAIDRVMRQDYFMVPTWYLGANWVAYFDMYEYPENLPEFGLGYLDYWWFN QGKADALIAAGALR" gene complement(1624069..1624593) /locus_tag="SKA53_08276" CDS complement(1624069..1624593) /locus_tag="SKA53_08276" /note="COG3474 Cytochrome c2" /codon_start=1 /transl_table=11 /product="Cytochrome cy" /db_xref="CDD:12802" /translation="MDRDMFDTMTITKAVGALCATLLVYLLGAWLASSIYFGGGHEYG EQAYIIPVEETASTEDEAVEEVDFAVIMASASAADGETLWRNCRACHVLEPGVHGTGP ALYGVVGRPVQFYDNFSYSGALIAAADVWTPENLNGFLENPRGYAAGTTMGYNGMRAI EDRANLIAYLATFN" gene 1624704..1625561 /locus_tag="SKA53_08281" CDS 1624704..1625561 /locus_tag="SKA53_08281" /EC_number="4.2.1.51" /note="COG0077 Prephenate dehydratase" /codon_start=1 /transl_table=11 /product="prephenate dehydratase" /db_xref="CDD:9952" /translation="MSRNIAFQGELGAYGHEACATARPDHTPLPCATFEDAIAAVRNG DADLGMIAVENSTYGRVADVHSLLPESGLHIVDETFVRVHINLLAKPGANLSDIDTAV GHPVILPQCAGFLRKHGIAGRTSTDNARAAREVAQGSDLTTAALASELAAQIYGLQVL ARHIEDHDRNTTRFLIMARAPDQTRRGDFGMVTSFVFRVRNIPAALYKAMGGFATNGV NMTKLESYMVGGQFTATQFYAEIEGHPEDRNVQLALEELRYFTDHLLVMGVYPAAARR HEAAANAGL" gene complement(1625568..1625633) /locus_tag="SKA53_08286" CDS complement(1625568..1625633) /locus_tag="SKA53_08286" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLDMRANIHAAIADVTCIAL" gene complement(1625623..1626642) /locus_tag="SKA53_08291" CDS complement(1625623..1626642) /locus_tag="SKA53_08291" /note="COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family" /db_xref="CDD:12170" /translation="MLSEKFELCPDPCHFDQMMLSETVTFGGSALDRAAHLRADPAVA GQAGARAILLWRGKPMVIDDTLVQVPLDHPVMADTAPDLILLGRDDAGPVFAADLSGW TPPDLDITHLDTFLDPSEQKHPAMPAGAGFFELRAIMTRLTPRDAELAATAKAVLGWH DMHGFCARCGAQSVIAMSGWQRDCPACGAHHFPRTDPVVIMLITHGNAVLVGRSPGWP EGMYSLLAGFVEPGETIEAAVRREVREEAGIHVGAVRYLASQPWPFPASLMFGCAGDA LGTDLSIDRTEIEDALWISREDMALSFAGLHPTIKPARKGAIAHFLIENWLADRSYDG SADAP" gene 1626699..1628537 /gene="cpdB" /locus_tag="SKA53_08296" CDS 1626699..1628537 /gene="cpdB" /locus_tag="SKA53_08296" /EC_number="3.1.4.16" /note="COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases" /codon_start=1 /transl_table=11 /product="2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein" /db_xref="CDD:10605" /translation="MGATNGRGACQATLRILATTDLHMQILPYDYFADRAEQIGGLVH LADQITALRADQSALTLLFDNGDFLQGNPLADTLAQAGSAKTPHPMIAAFAALHYDAI NLGNHEFNYGLPFLRQVLQDASCPVVCANVDWRDQAQIAQPFVILDRVIRCEDGHDHP LRIGVVGFLPPQITKWDKVKLADAIATCDIVEAAHRIVPQIKAAGADIIVALCHAGID TADHRPGMENAAVPLAAVPGIDAILTGHTHEIFPDATRPATPYVDPVAGRIHGKPAVG AGFYGQSLGEITLRLRRAADGWHVTNHTSAVLPAAPKVPDSAISARIKAGVQPAHSAT LRQVRQPIARTLVPIHSYFARISPDLPSHILGQALIAHAASVLPANSLPIIAAVSPVR AGGLGGPSCYVAIPPGPIMRRDVCAIYPYADTPVIARRTGAELRAWLEQAVSGYHQII PGRADQALLNPDFAGYVFDAFHGLTYTIDLTQPPRHDAAGRISAPAAARIIDLEHNGT PVRPEQCFAVVANSYRSFGGGGFPPIPMHDILAMSRQPVRDILTARVQCQGVVTAPIK APWRFAPIPDTFVDFISAPDGRHHMTDRICNAGTQADGFTRYRLAL" gene complement(1628959..1629090) /locus_tag="SKA53_08301" CDS complement(1628959..1629090) /locus_tag="SKA53_08301" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKFPSQGCLAALTGHMPQVIAAAAERKPALAIARGQTGVIVTD" gene 1629089..1630213 /locus_tag="SKA53_08306" CDS 1629089..1630213 /locus_tag="SKA53_08306" /note="COG0381 UDP-N-acetylglucosamine 2-epimerase" /codon_start=1 /transl_table=11 /product="UDP-N-acetylglucosamine 2-epimerase" /db_xref="CDD:25900" /translation="MSRYILFVTGTRADFGKLEPLAVAARDAGFTVAFFVTGMHMLQS YGLTKLEVHRMAGVTVHEFLNQRPGDPQDMILAKTVIGFSDFVQEHRPDLVVIHGDRV EALATALVCATNYIRCAHVEGGEVSGTIDEIYRHCNSKLASHHFVSSDDAARRVMSLG EQASHIHAIGSPELDFHAGPSGVTIAQVKDRYALPFADYGICVFHPVTSEAASMGAQA SALFAALVASGRNFVVIAPNNDPGSAAIFAAIDALPKDRFRVLPSMRFAHFSELMKNA AVMVGNSSAGVREAPFLGLASLDIGTRQTNRAKSPSVFFADAGDSTAIARFVTAQWGK SYPRHDAFGGGSAAGRFAAVLAEPDFWTGSLQKTFHDHDA" gene 1630197..1631459 /locus_tag="SKA53_08311" CDS 1630197..1631459 /locus_tag="SKA53_08311" /note="COG1519 3-deoxy-D-manno-octulosonic-acid transferase" /codon_start=1 /transl_table=11 /product="putative 3-deoxy-D-manno-octulosonic-acid transferase" /db_xref="CDD:11233" /translation="MTTMPKASLALRAYLAASHLIPLVAGPVLARRRKRGKEHPTRWV EKQGRGLAARPAGRLVWINAVGLGEILSLRGLIARMAAAAPDLHFLVTSTTAASARVF GAQMPPRTIHQFLPLDAPTYRQQFLHHFRPDLCIWAEQDLWPGLVHDADRRGIAQAMV AARMNADSFARHGKAAGLYRDLYARMALVTAQDAGSAAHLTQLGATARVSGSLKPAAP PLDCDPSALRDLQAAVGTRFVWATAPSHPADEAAALAAHNLLRAQIPDALLIIAPRHP DRRDAIVAACPAPPPMKSQAALPGPADPVWLCDTLGDLGLVYRVARAVLIGGTFDATE GHNPWEAAQLGCAVLHGPNVDNFTADFAALGAGGAIAVHDPATIARALHGDLATVAGK AKAIAQDAGDATDLLVRDLLALVKARHD" gene 1631452..1632786 /locus_tag="SKA53_08316" CDS 1631452..1632786 /locus_tag="SKA53_08316" /note="COG1519 3-deoxy-D-manno-octulosonic-acid transferase" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonic-acid transferase" /db_xref="CDD:11233" /translation="MTDRFPPLRLRIALLAYGLAWWFMLPVVIIYLRVRARKDADYGA HLAERFGLVRARLRNPVWVHAVSLGEMRSATPLIRALLAQGECVLTTHFTPAGRREAV REFATEIAAGRVQVAWVPFDMGLAYAAFLRRFAPKYGLVMEIEIWPRMIMAARARGVP LFMCNAQYPQKSFDKDMAGWGLRAALTGGFAGGFVKSALQAERFVAAGLRNIHVTGEM RFDQPIPQAQLEAAARLRDRLVAGRPAFTLTSVVEGEDAVYIDMIRRVPDAFFVYVPR APERFDAVAAMLEGAGLRFARRSEVLDAALGARDLPQIDVLLGDSMGEMYFYLALCDR AIVGGGFVTKGAHNIIEPLALRKPVIVGPHIWTIAYPAQEAIAAGVCHHVMTEAELLE AVQAPMVVTDDQIAGFYADHAGAVDRTLAALPRALAGLPAPVGAVEASGGDI" gene complement(1632783..1633937) /locus_tag="SKA53_08321" CDS complement(1632783..1633937) /locus_tag="SKA53_08321" /note="COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein" /codon_start=1 /transl_table=11 /product="putative Acetoin utilization protein" /db_xref="CDD:24480" /translation="MNDVMTALSARTSPLPQFIGAEIYRGSTYGPWHPLRVPRVSTVM DLSRALGWLPPAQFITSPRAKTAALTGYHTAAYLAALQAAEAAQTVSDAVRARHGLGT PSNPVFSEMFRRPATAAGGSLLAGELLKNGGIIYSPAGGTHHGLPDRANGFCYLNDPV LAIQSLRRNGAQRVAYVDIDAHHPDGVEHAFAQDPDTLLISTHEANRWPRTGAITDQG AGQVFNLPVPAGLHDDDMALILHELILPAVTAFRPDAIVLQCGADAVLEDPQSRLCLS NNAHWAVVAALRDIAPRYLVLGGGGYNPWSVGRLWTGVWAVLNDHEIPDHLPDQATGV LRALRWDGAPKRLQPQDHWMTTLRDAPRHGMIHDAVRSGVAQLKPRIVGA" gene 1633971..1634441 /locus_tag="SKA53_08326" CDS 1633971..1634441 /locus_tag="SKA53_08326" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MANLPAQQIPLKFATGRKTDIRAQFAALCWRVNIDRVEICLVTS RTRGRWILPKGWPMHKQTPAAAAAMEAYEEAGLRGEALDICLGIYSYIKPLGNVNAPI VAMVYPVHVQQVLSEWPEKHQRKRKWFSPEKAAKKLEEPALKKIVATFDPAVLR" gene 1634497..1634886 /locus_tag="SKA53_08331" CDS 1634497..1634886 /locus_tag="SKA53_08331" /note="COG5319 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26786" /translation="MIRFHLKCDQNHQFESWFQSGAAFDKLVAGKHVSCTVCGSSVVT KSVMAPAIATTAAPVENQMAALRKKIESSADYVGTAFAKEARDMHDGLTPDRPIYGEA NLAEARKLAEDGIPVMPLPFIPAKKVN" gene 1634886..1635533 /locus_tag="SKA53_08336" CDS 1634886..1635533 /locus_tag="SKA53_08336" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="oxidoreductase, short-chain dehydrogenase/reductase family" /db_xref="CDD:25396" /translation="MHVLITGANRGIGKAMVDRYAAQGAQVTGTARVAGARLHRMDVT DPATVNALADTMADQALDLLVCNAGVYADKGQSLDQGYPADMWADGFATNVTGVFLTV QAFLPHLRRAQTGKIAIISSQMASHTRAPGGSYIYRASKAAALNLGRNLASDLAAEGI SVGIYHPGWVRTDMGGSTAEISVDESATGLIARFAALGPATSGCFETWDGRVHPY" gene 1635604..1636842 /locus_tag="SKA53_08341" CDS 1635604..1636842 /locus_tag="SKA53_08341" /note="COG0527 Aspartokinases" /codon_start=1 /transl_table=11 /product="aspartate kinase, monofunctional class" /db_xref="CDD:10398" /translation="MPTLVMKFGGTSVANLDRIARAAKRVAVEVANGYDVIVIVSAMS GKTNELVGWVSETSPLYDAHEYDAIVSSGENVTAGLMALRLQEMDIPARSWQGWQVPV LTTDAHASARIEEIPTKNITAKFGEGMKVAVVAGFQGVSAAGRITTLGRGGSDTTAVA FAAAFGAERCDIYTDVDGVYTTDPRITSKARKLDKISFEEMLELASLGAKVLQTRSVE LAMRYKVRLRVLSSFEEPSDSAGTLVCDEEEIMESNVVAGVAYSRDEAKMTLISVADR PGIAAAIFGPLSDAGVNVDMIVQNISEEGRTDMTFSCPKDQVLRAEKAMNDAKTSGAI NFHDLVADEGVAKVSVVGIGMRSHTGVAAKMFKVLSAEGINIKVITTSEIKISVLIDR KYMELAVQALHDAFELDKAG" gene 1636878..1639118 /locus_tag="SKA53_08346" CDS 1636878..1639118 /locus_tag="SKA53_08346" /note="COG3605 Signal transduction protein containing GAF and PtsI domains" /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate-protein phosphotransferase" /db_xref="CDD:12930" /translation="MPERLESESRKLLGRLREALASDSEGQARLNRVVDLIASSMQAE VCSIYLFRDADTLELCATQGLEQESVHQTRMRLGEGLVGRTAKTGNIVNIANAPAEKG FRYMPETGEERYSSFCGVPIQRLGDVLGVLVVQTKTERVMTPDEVYALEIVAMVIAEM TELGAFVGEGAALSALHQKPVLLRGSIAQEGTSAGRVYLHEPRVVVTNPISDDPEKEK TRLIEAVETLRKSVDNMMVGARSVDPEQVQVLEAYRMFANSSSWIRRMQDDVQSGLSA EAAVEKEQSLARARLSRSPDPYLRERLHDLDDLSNRLLRILTGQGEDRSDMPDDPILV ARNIGPGELLEYGKKLRGIVLEEGSVGSHATIVARAWAIPLVINAKGVTREALNGDII LVDGDQGIAHLRPDDTVQAAFRDKIEMQARAQERYASIRDLPAETKCGTRMSLQMNAG LIADLPSLAGSGAEGVGLFRTELQFLIRNQMPQRGELSALYDRVLNAAGGRRVAFRTL DIGSDKVLPYMKANDEPNPAMGWRAIRVGLDKPGVLRMQLQALLRGAAGRPLTVMFPF ITQLTEFRAAKAEMDKALDREVRLGHPVPAKIEVGAMLETPSLAFAPDVFFQEADFIS IGGNDLKQFFFAADRENELVRRRYDTLDVSFLSFLEHVIKRCDAAGTPLSFCGEDAGR PVEALCFAALGLRTLSMRPASVGPVKHLLRRVDLNEVRAVMDTAIANGDQSVRRAVSD WLVYQV" gene complement(1639109..1639909) /locus_tag="SKA53_08351" CDS complement(1639109..1639909) /locus_tag="SKA53_08351" /note="COG3333 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDKTVIPSASPLLVPPALDDSTRARIAALALRQRKANGVLMKA INFVGGQVEDGLKMLPKPLRDQLNEVTRNALRRSYDIAAQSRSGVGQRFGSDQSHRII GTLSGAIGGFGGLPTALAELPIATTLIFRAVLHVATEYGEDPASDETRMECLAVFGSG GPGSADDGVDTAFIGARLSLSGAAVNTLISRVAPKFAAVLSQKLAAQTVPVLGAVAGA GTNYAFVDYYVALAHVHFGLRQLVREHGDVAVLDEFHRQLAAPRLPQT" gene complement(1639925..1640440) /locus_tag="SKA53_08356" CDS complement(1639925..1640440) /locus_tag="SKA53_08356" /note="COG3153 Predicted acetyltransferase" /codon_start=1 /transl_table=11 /product="acetyltransferase, GNAT family" /db_xref="CDD:12492" /translation="MQIPSITLAIETGADYWEAEALYDLCFSPGRSALSSYRLREDVS PIADLCWTARDPDAVLAGVIRCWPCYVGETPVVLLGPVAVHPTRQGEGIAGRLIYRVT QVARKAGWSRILLVGDLPYYSRFGFQQLTGVIMPPPTNPERVLGLSLASDSWAGIHGP VRKADDCILPR" gene 1640439..1641122 /locus_tag="SKA53_08361" CDS 1640439..1641122 /locus_tag="SKA53_08361" /note="COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11563" /translation="MRLSSGQGCAVTLPLGGSQEKVLTMFYAPKDGHNLPHNPFNAIV SPRPIGWIATRGADGQDNLAPYSFFNAVAYEPPQVMFASTSAKPDRDGTKDSAANIRE TGVFAVNIVEYAMRDAMNQTSGPWDRATDEFALAGITKAECETIACARVANAPATLEC KLTQIVTLPGAANFAVFGEVIGVHIRDNCLVDGLFDVTTFHPLSRLGYRDYTAVRDVF SLTRPGEKA" gene 1641119..1642003 /locus_tag="SKA53_08366" CDS 1641119..1642003 /locus_tag="SKA53_08366" /EC_number="2.4.2.28" /note="COG0005 Purine nucleoside phosphorylase" /codon_start=1 /transl_table=11 /product="5'-methylthioadenosine phosphorylase" /db_xref="CDD:4371" /translation="MTQTILGIIGGSGIYDMDGLQDPSWVSVDSPWGAPSDAVLTGQM EGVKMAFLPRHGRGHVHSPTTVPYRANIDALKRLGVTDIISISACGSFREEMAPGDFV IVDQFIDRTFAREKSFFGTGCVAHVSLAHPTCPRVSTACATAAQAAGITVHRGGTYLA MEGPQFSSVAESKLYRSWGCDVIGMTNMPEAKLAREAEICYASVAMITDYDSWHPDHG AVDITAIIATLKGNGSKAHDLIARLPALLGADRSPCPHGCDRALDHAIMTAPDKRDPA LLARLDAITTRVFAKETR" gene 1642000..1642530 /locus_tag="SKA53_08371" CDS 1642000..1642530 /locus_tag="SKA53_08371" /EC_number="2.4.2.7" /note="COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins" /codon_start=1 /transl_table=11 /product="adenine phosphoribosyltransferase" /db_xref="CDD:10374" /translation="MKTVRDYIRTIPDFPHEGIMFRDVTTLFGDARGFRMAIDQLLHP YAGTPIDKVVGLEARGFILGGAIAHQMSVGFVPIRKKGKLPGKTVEQAYQLEYGEAVM ELHDDALQPGEKVLLVDDLLATGGTAEAGIRLIERLGAQVTGCAFVIDLPELGGARRL QNLGMQVHSLCAFEGL" gene complement(1642754..1644166) /locus_tag="SKA53_08376" CDS complement(1642754..1644166) /locus_tag="SKA53_08376" /note="COG0277 FAD/FMN-containing dehydrogenases" /codon_start=1 /transl_table=11 /product="oxidoreductase, FAD-binding" /db_xref="CDD:10151" /translation="MLNAVTPEFEDLLRGLLDAAAFRPDSAAYFNEPRGRWQGHGLVV APADTAAVAAVVAACAQARVAIVPYSGGTGLVGGQVMPDGPAPVVLSLERLNKIRAVY PSENVLVCEAGVILAHVQQAAEDLDRLFPLSLASEGSARIGGLLATNAGGVNVLRYGN ARALCLGLEVVRPDGTIWHGLTRLRKDNTGYDLRNLMIGAEGTLGIITAAALRLVPRP VHLGAALLAVPSPQAALDLLALAGAQIGDGLSAFELMHRQGFDFLAEVGPDVRQPLDA IPEWSVLIDLGLPASGDPDAALERLFTDAFDAGLVLDGVIAQSAAQRQALWAIRENIP EANRRIGSIVSHDIALPLSAVPAFIAQASAAVQALSDMRINCFGHLGDGNLHYNVFPA KGRMRMDYDALRPAIQQTIHDLVAALDGSVSAEHGIGRAKVDDLQLYGDAAKLAMLRA IKDALDPQGIMNPGVILPQG" gene complement(1644167..1644751) /locus_tag="SKA53_08381" CDS complement(1644167..1644751) /locus_tag="SKA53_08381" /note="COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins" /codon_start=1 /transl_table=11 /product="putative ribosomal-protein-alanine acetyltransferase" /db_xref="CDD:11381" /translation="MLGIKRKVRIETERLTLRAPMHTDFRPWAALRQASADFLTPWEP SWASDHLSRRGFTNRVYWAQRSIAQGSALPLFLFRRSDDALLGAITLDHIKRGPAQSG ITGYWIGAPFARQGYMREAVQAVVHHAFTVLDLSRIEAGCLPENTPSRRLLEQCGYKY EGVAQSYLQINGRWRNHVLYANLRHDRRGKTDVG" gene complement(1644751..1646019) /locus_tag="SKA53_08386" CDS complement(1644751..1646019) /locus_tag="SKA53_08386" /note="COG0612 Predicted Zn-dependent peptidases" /codon_start=1 /transl_table=11 /product="peptidase, M16 family" /db_xref="CDD:10482" /translation="MTIQQHTLSNGLRIVTEQMPGLKSTSIGIWVLAGGRHERIEQNG IAHFLEHMAFKGTKSRTALQIAEQIEDVGGYINAYTSREMTAYYARVLEDDVALGLDI IADILLNPLFEDAEIEVERGVILQEIGQTLDTPDDIIFDWLQEEAYPDQPLGRSILGE AARVSTFAKGDLDRFVAEHYGPNQMILAAAGAVDHDAIVRQAEALFGHLPRVERAAGL LQPAKFIGGERRATKALEQVHFALALEGPTYRDPAIYTAQIYATALGGGMSSRLFQEI RENRGLCYTIFAQAGAYEDTGMTTIYAGTSAEQIAELAHLTIDEMKRAADDMSDAEVA RARAQMKAGMLMGLESPSNRAERLARLLSIWDRIPGIEETIAHIDDVTTGDVKTFAAQ MAGQVGTALALYGPADQAPTLDALKARLAA" gene complement(1646016..1647401) /locus_tag="SKA53_08391" CDS complement(1646016..1647401) /locus_tag="SKA53_08391" /EC_number="4.2.3.1" /note="COG0498 Threonine synthase" /codon_start=1 /transl_table=11 /product="threonine synthase" /db_xref="CDD:10369" /translation="MRYISTRGTAPVLTFEQAMLTGLARDGGLYVPEDIPTLSHAQIA AMAGKSYEDVAFDVMRPFIGDTFTDAQFRDLISRAYAGFGHAARAPLVQVDSNHYLLE LFHGPTLAFKDFAMQLIGQMFQAALSRSGDRVTIVGATSGDTGSAAIEAFRGLKAVDV FILYPHGRVSEVQRRQMTTPTEANVHALAVAGDFDDCQALVKDMFNDFAFRDDVRLAG VNSINWGRVLAQVVYYFTAAVSLGAPHRPVSFTVPTGNFGDIFAGFIAKQMGLPIADL VVATNRNDILHRTLLTGAYTKQGVTPTISPSMDIQVSSNFERALFYAYGQDGAAVASQ MEDLKSGGFKISQGAYDMLTAAFKSGRASEEDTSTTIKTYLAQHGELLCPHTAVGAHV AQAHLGSVPMVTLATAHPAKFPDAVKAASGISAPLPARMADLYDRPERVTPVAADLAA LQAVIKERIIS" gene complement(1647404..1648084) /locus_tag="SKA53_08396" CDS complement(1647404..1648084) /locus_tag="SKA53_08396" /note="COG3346 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="Surf1 protein" /db_xref="CDD:12680" /translation="MLRKIIFPVLLGVAGCGVLLWLGLWQIDRLAWKQDILANINARL DADPQHFTPDVTEAADEYTRVTLSGTPTGEELHVLVSGTAAGTGYRVISRFATDDGLT ILLDQGLLPLEAKAAAPLLAPMQVTGTLVWPDDQTSSTPDPDLPANIWFARNVDTMAA AMDSLPVMVVATATTPADPRLTALPVATADIKNDHFAYAVTWFLLAIVWAVMSLFLIL RTLRPKDA" gene complement(1648162..1648965) /locus_tag="SKA53_08401" CDS complement(1648162..1648965) /locus_tag="SKA53_08401" /note="COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, subunit III" /db_xref="CDD:23012" /translation="MAHTKNHDYHILPPSIWPFIGGLGAFVMLFGSVLWMHESGPWVF LMGLIAVLYVMFAWWSDVVAESQAGDHTPVVRIGLRYGFIMFIMSEVMFFAAWFWSFF KHQMYPMETYMGTEYIKPEIYAIDPFGLPLINTLLLLISGCAATWAHHALVHENNRKD LKLGLVLSIIFGAIFTAFQAYEYWILVTQDGYTFGGEIHYANFFMATGFHGAHVVIGA IFLLICLLRAERGHFTPEKHVGFEAAIWYWHFVDVVWLFLFAAIYIWGA" gene complement(1648991..1649605) /locus_tag="SKA53_08406" CDS complement(1648991..1649605) /locus_tag="SKA53_08406" /note="COG3175 Cytochrome oxidase assembly factor" /codon_start=1 /transl_table=11 /product="cytochrome C oxidase assembly protein" /db_xref="CDD:12513" /translation="MTLFPRLKGIHRSAAQATALVVVMGALAWASVPFYDWFCRVTGF GGTTSVAAGDSDIILDETIKVRFDGSLARDMPWTFKPVQREVELRIGETALVFYEAHN PLDVPIAGQASYNVTPYEAGGFFDKIECFCFTQQVLAPGETVLMPVSFFVHPDIVDDR EGQYVHTITLSYTFFEIDLPSDYMQASADATALTPASQDAIETY" gene complement(1649602..1649805) /locus_tag="SKA53_08411" CDS complement(1649602..1649805) /locus_tag="SKA53_08411" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVIRVEHELHTRRKGRNAGVGLLLVGFIAIVFGLTVVKVLQLDN IRQFETFDHAPRPQLVPETEVGQ" gene complement(1649799..1650752) /locus_tag="SKA53_08416" CDS complement(1649799..1650752) /locus_tag="SKA53_08416" /EC_number="2.5.1.-" /note="COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor)" /codon_start=1 /transl_table=11 /product="protoheme IX farnesyltransferase" /db_xref="CDD:9984" /translation="MTDFSANDHTTQKAGHEAGMGDYFALLKPRVMSLVVFTALVGLL VAPVPVHPFIGFVAILCIAVGAGASGALNMWWDADIDAVMKRTVGRPIPSGRVAPGEA LGIGAALSGFAIVLLGLATNFLAAGLLAFTIFFYLVVYSMWLKRATPQNIVIGGAAGA FPPMIGWAVATGGVSIESLLMFALIFMWTPPHFWALALFVKSDYGRAGVPMLTETHGR DVTRRHVLVYTLLLVPVALGLGLTSIGGPFYMAVAVVMNVWFLKGAYDIWQRDDAACE ADKHAVEIKVFKVSLYYLFAHFGALLVEAALRLYGLGGWSW" gene complement(1650831..1651658) /locus_tag="SKA53_08421" CDS complement(1650831..1651658) /locus_tag="SKA53_08421" /note="COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2" /codon_start=1 /transl_table=11 /product="Cytochrome c oxidase polypeptide II precursor (Cytochrome AA3subunit 2)" /db_xref="CDD:11334" /translation="MRLNTFATSVWTTLGLVLAGSTAMAQQNIGQDLEIVGQPLPGGM GFQPSATELARDVVWLDSMLLVIITVITVFVTGLLIYVIMRYNARRNPNPAGFTHNSP LEVAWTVVPIVILVFIGAFSLPILFKQQEIPEADITIKVTGYQWYWGYEYVDEDVSFE SFLLNREELEQFGYTQDQYLLATDTAVVVPVGATVVMQVTAADVIHSWTVPAFGVKQD GIPGRLAELWFAAEREGIYFGQCSELCGQAHAYMPITVKVVSQETYDAWLADEKGLS" gene 1651839..1653260 /locus_tag="SKA53_08426" CDS 1651839..1653260 /locus_tag="SKA53_08426" /note="COG0312 Predicted Zn-dependent proteases and their inactivated homologs" /codon_start=1 /transl_table=11 /product="probable modulator of DNA gyrase" /db_xref="CDD:10186" /translation="MTATPFRPFETHLDQARALVLLRAATAGADDGELFIERRKSEML SLDDGRIKTASFDASEGFGLRAVRGETAGYAHATTIDEHALHRAVSTARLAVGDGGGV MADAPAGTNAKLYSDDDPMLQASFPAKIDVLREIDAFARALDARVVQVSASLGASHQE VVILRPEGTLVTDTRPMSRINISVIVEQNGKRESGGMGGGGRTGLIGLISRDHWEPIL REALRIALVNLDAEPAPAGVMDVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFAGLM GQQIAAKGVTVLDDGTIPDRRGSITVDDEGTPSARNVLIEDGVLVGYMQDRQNARLMG VAPTGNGRRESFAHTPMPRMTNTYMLAGDASPESLVSELKDGIYAVGFGGGQVDITNG KFVFSCTEAYRVKNGIIGAPVKGATLIGDGATALQRIRGVGNDLALDPGIGNCGKAGQ WVPVGVGQPSLLIGGLTVGGAAA" gene 1653555..1654565 /locus_tag="SKA53_08431" CDS 1653555..1654565 /locus_tag="SKA53_08431" /note="COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake" /codon_start=1 /transl_table=11 /product="DNA processing protein DprA, putative" /db_xref="CDD:10626" /translation="MLAEYGTATNALHALPDVARAAGVAGYEICPIGVIRAELQAAKA AGARLLWDNDALYPAALRDMPDAPAFLWCLGQTELLTRPMIALVGARNASSLGTRMAR KLANDLADAGYVVVSGLARGIDTAAHLGALAGGTVAVQAGGVDVIYPVENTQLAHDIA KQGLRIAEMPMGLQPQARHFPARNRIISGIAQAVVVVEAAAKSGSLITARNALDQARD VLAVPGHPFDARAAGCNMLLRDGATLVRSADDVIEALAYKPVITTPVPRQAPQARPAL RNIAALHAMILQRLGPAPVAEDQLLRDLAVSATDVGPALVDLELDGKITRQAGGLLAR AV" gene complement(1654639..1654701) /locus_tag="SKA53_08436" CDS complement(1654639..1654701) /locus_tag="SKA53_08436" /EC_number="5.99.1.2" /codon_start=1 /transl_table=11 /product="DNA topoisomerase I" /translation="MGILYLRGFVQVAQDVATTT" gene 1654700..1657312 /locus_tag="SKA53_08441" CDS 1654700..1657312 /locus_tag="SKA53_08441" /note="COG0550 Topoisomerase IA" /codon_start=1 /transl_table=11 /product="DNA topoisomerase I" /db_xref="CDD:10421" /translation="MPVVVVESPAKAKKINEYLGKGYIVLASYGHVRDLPPKDGSVLP DDDFDMKWEIATDSKKHIKAIVDALKTDNELILATDPDREGEAISWHLTEALTEKKAI RKDTPVSRVVFNAITKTAILEAMKNPRQVDAPLVEAYLARRALDYLVGFNLSPVLWRK LPGAKSAGRVQSVCLRLIVEREMEIEAFRNQEYWTVKAQLQSPRGQMFEARLTALAGK KLDKFDLGNATQAELAVQAVTSRDLKITSVEAKPAIRNPSPPFMTSTLQQEASRKYGM GAKQTMSVAQRLYESGLITYMRTDGIDMAPEAVTGARDAIKAKFGAQYLPDQPRIYKN KAKNAQEAHECIRPTDMMVGADQADIKDVDQRKLYDLIYKRTLASQMAAAQLERTVVD VASADGQVILRANGQVMVFDGFIAIYEEGRDDTADDDDKRLPQLAQGEKVVKQSVDPE QHFTQPPPRYTEATLVKRMEELGIGRPSTYASIVTTIQDRGYVEKDKNRLIPQDKGRL VTAFLMNYFQKYIGYDFTADLENQLDEVSAGNADYKKVLDRFWRDFSAAIGETADLRI GEVLDKINEVLEPHLFPPTADGTDPRLCPNCGAGRLSMRTARSGGAFIGCSNYPECRY TRPFGPPDPEAEKSAIPPDGKLLGHDAGDEIRIFKGRFGPYVQRGATSEANPKPDRTG VPEGWPAEEVDLEQALRLLQLPRQIGLHPEDGIMVWANIGRYGPYLKHAASTSDKGGT NANLDGIDEVWTVGMNRAVQLLAEKVASRGGRGKAAAPIRELGDHPQAGGAVNIYDGK YGPYVKWDKINATIPDTITPDDLTLAQAIDLIDERAAKAGKKKPSAKKPAAKKPAAKK PAAKKPAPKKAATK" gene 1657386..1658090 /locus_tag="SKA53_08446" CDS 1657386..1658090 /locus_tag="SKA53_08446" /note="COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit" /codon_start=1 /transl_table=11 /product="3-oxoadipate CoA-succinyl transferase, alpha subunit" /db_xref="CDD:11499" /translation="MKKIYGSAQEALDGLLFDGMFIAAGGFGLCGIPELLLAAIKDAG TKDLTFASNNAGVDDFGIGILLQTRQVKKMISSYVGENAEFMRQYLSGELELEFNPQG TLAERMRAGGCGIPGFYTKTGVGTVIADGKEHKDFNGQTYILEHGIVTDLSIVKAWKA DETGNLVFRKTARNFNPPAAMCGKICVVEVEEIVPTGSLDPDHIHLPGIYVHRIIAGT HEKRIEQRTTRKREDA" gene 1658090..1658728 /locus_tag="SKA53_08451" CDS 1658090..1658728 /locus_tag="SKA53_08451" /note="COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit" /codon_start=1 /transl_table=11 /product="3-oxoadipate CoA-succinyl transferase, beta subunit" /db_xref="CDD:11765" /translation="MAEQIKGWDRNQMAARAAEELQDGWYVNLGIGIPTLVANYVGDK DITLQSENGMLGMGPFPFEGDEDPDLINAGKQTITELGRTAYFDSATSFGMIRGGKIA AAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVIVVMDHTNKHGESKVLK SCTLPLTGKGVVDRIITNLGVLDVVEGGLRIVACADNVTEAELRAATEATIV" gene complement(1658784..1659623) /locus_tag="SKA53_08456" CDS complement(1658784..1659623) /locus_tag="SKA53_08456" /note="COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /codon_start=1 /transl_table=11 /product="transglycosylase, Slt family" /db_xref="CDD:27995" /translation="MYLIRVAFAAAFALLSATTVFAQVERLQPDFTFKRVGVPAAGQT TGRITVQIDPDAPRRGPVYAAPRAEPVSAIAASPRTQSGFGWFWDNVPSSLTGSSPAR LELAINRINNPPTGQHMPAPRLQALQNIAAAQGVHILRETVGTDVSPALVLAVIAIES AGRTDVVSTAGAQGLMQLMPTTAARFGVSDSMDAAQNIKGGVAYLGWLLDRFGNDPVL VLAGYNAGEGNVQRYQGVPPFAETMDYVPKVLAAWQVAKGLCQTPPDLITDGCVFNVN ALQ" gene 1659878..1660147 /locus_tag="SKA53_08461" CDS 1659878..1660147 /locus_tag="SKA53_08461" /note="COG3288 NAD/NADP transhydrogenase alpha subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVKSKTDRDAQGLSPSPARNGQTINDTPGGSSMLNFIKTFHKDE DGAVTVDFVVLTAAIVLLGIAVGTAISGGAGQLSNRITNDLVNQV" gene 1660332..1660505 /locus_tag="SKA53_08466" CDS 1660332..1660505 /locus_tag="SKA53_08466" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKSILQTFHTDESGAITVDWVTLSAAVVALMFLIMSTIGGAAEG HATWLQTTMANMM" gene 1660806..1661639 /locus_tag="SKA53_08471" CDS 1660806..1661639 /locus_tag="SKA53_08471" /note="COG3745 Flp pilus assembly protein CpaB" /codon_start=1 /transl_table=11 /product="CpaB family protein" /db_xref="CDD:27088" /translation="MRAVFGLVLLVGMGLAGFAVYMVNQYMATQTAQLDRARQIAAQA LVTVDVYVTTRSVTYGEYLTADDVRLVPYPRDYLPEGTFATEQSLFPQGTQTPRVVVL PMIANELVLTTKVSEPGASRGLTALVEPGFRAFPVEGRVAAGFGILRPDDRIDVYWTG RLRDGREVTNLIKSGLQIIAVLGDAGNRGGPQSVVVQVTPEEVALLTQAQNSGQLTLA LVGTGDLSETGPVTIDNSALTGEQDIVAAPTPVVEEARRCFVTQRSGTQSVQVEIECS E" gene 1661957..1663387 /locus_tag="SKA53_08476" CDS 1661957..1663387 /locus_tag="SKA53_08476" /note="COG4964 Flp pilus assembly protein, secretin CpaC" /codon_start=1 /transl_table=11 /product="Outer membrane general secretion pathway protein, Secretin" /db_xref="CDD:14096" /translation="MNYDRFLKAALAGVALSMTAAAPAMAQDSTLRVLRGAASNALDV PMNRAVVVESDVPFTELSIANPGIADISSLSDRTIYVLGKEPGRTTLTLLSADGRLIT NVEVHVSPDMAEFKERLTQILPGENIEVRTANDGIVLSGTVSSTARLDRALDLAQRYA PDRVSNLMSVGGTQQVMLKVRFAEMQRSVSKALSSSLSLNGTSLQNGRNIRGGSNTTV GQAGITNTLNNIVPTANDNNGAFLFGFGAGGVEVGVLLEALESRGVVRSLAEPNLTAL SGQQATFLAGGEYPVPVSSEDGAISVEYKPFGVELNFTPRVVDGDVINLELLAAVSAI DPSNSFSANGFEISAFSRRETSTTVEMRDGESFAIAGLLSDDFTDLSGQVPWIGDVPI LGALFRSAEYARRQTELVIIVTPHLVSPTRGTALALPTDRVRPPSEQDLFLFGRVTAA SAPTRGGAGEVARQDFMGSYGYVMDE" gene 1663401..1664057 /locus_tag="SKA53_08481" CDS 1663401..1664057 /locus_tag="SKA53_08481" /note="COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins" /codon_start=1 /transl_table=11 /product="OmpA family protein" /db_xref="CDD:12236" /translation="MKRYMSTALVAATLSACGPSGPTSSSFFTEAGSEIDQGDFGNAT MNNALVQTRQQDYTINLARRFNTEVDAMVNFEFDSAILDSLAQATLRQQADWIRQFPE VRFKVFGHTDLVGSAEYNRNLGLRRAQAVVGYLSTQGISRDRLEAVVSFGATQPLIPT PEPERRNRRTVTEVSGFVETSPLLLNGKYADVIFREYVSSAEPNTTVQDTTITTGSGG " gene 1664292..1665536 /locus_tag="SKA53_08486" CDS 1664292..1665536 /locus_tag="SKA53_08486" /note="COG0784 FOG: CheY-like receiver" /codon_start=1 /transl_table=11 /product="ATPase, putative" /db_xref="CDD:14095" /translation="MTTSPAVQNDPSPIVACTISRDVQIFDLLIEDMESALGDSWGNL SFEDAAAFLAQPDARALQFVTIALDAQDEDNLQQVSDIITAAKAARIKVILIAEDLTP AALHRLLRIGGDEFVPYPLPENELARAIERVLTIDDTAQFSPTGTQFKATGTKSGVVI PIHGLAGGTGATMMAVNLAWELANIDPKDPPKVCLIDLDFQFGTASTYLDLPRREAVL EMLTDTAAMDAESFMQALLTYGDKLHVLTAPTDMIPLDMISPADITRVIEMARMNFDY VVIDMPSTMVEWSQTVLEAAHVYFAMIELEMRSAQNTLRLKRALQSEELPFEKIRFIL NRAPGFTDLNGKSRVKRLAESLGISVEVLMPDGGKAVMQSADHGTPLAESNPKNPLRK EIMKLAKSVHEVNVTATADAKA" gene 1665546..1666985 /locus_tag="SKA53_08491" CDS 1665546..1666985 /locus_tag="SKA53_08491" /note="COG4962 Flp pilus assembly protein, ATPase CpaF" /codon_start=1 /transl_table=11 /product="type II/IV secretion system protein, TadA subfamily" /db_xref="CDD:14094" /translation="MFSKYKKPGVPVAGVTQTTGQRAVASAPNPDSPSLMKAMPQRRP ADAGPADKDKRRKDRLQELKLDLHKSLLENLNLAALETATEQELRTEINAIANETLEE MGVVLSREERQTLSQDLFFEVTGLGPLETLLKDDTINDILVNGPQQIFVERNGKLELT DVTFKDERHLLRIIDKIVSAVGRRVDESNPYVDARLADGSRFNAMVPPIAVDGSLVSI RKFKKDKLGVDDLVRFGAFTEEMAAYLQAAVSTRLNIIVSGGTGSGKTTTLNALSGFI DDAERILTIEDTAELQLQQTHVGRMESRPPNVEGKGGVSQRDCLKNALRMRPDRIIVG ETRGEEVIDMLQAMNTGHDGSMTTIHANSARDGVSRLENMIAMAGIDMPIKAMRSQIA SAVNLIVQASRLQDGSRRMTSITEITGMEGDVISMQEIFRYQRVGLTPDNKIIGHFTA TGVRSHFSERFKLWGYDLPPAIFEPMVAE" gene 1666994..1667956 /locus_tag="SKA53_08496" CDS 1666994..1667956 /locus_tag="SKA53_08496" /note="COG4965 Flp pilus assembly protein TadB" /codon_start=1 /transl_table=11 /product="Putative Flp pilus assembly protein TadB" /db_xref="CDD:14097" /translation="MSIEPIIYILIFVAVLALVQGAYLVIFGKSISMDGKVNRRLEML DKGGNREQVLDQLRKEMTQHMKSQSIPIYSLLATKAQKANIAFSPTQIMMVMAVVSVA AFLMLTLFTQVAPPVRILISVLMGVGGVYLWISRKATQRINLISEQLPDAVDLMVRSL RVGHPFSSAINIAAKEVPDPLGTEIGIIADETAYGRDMGETLKAMAERLDNQDLRFLA VAVTIQQSSGGNLAEILDGLSKVIRARFRLFRRVKAITAEAKWSGNLLSAFPILALIG INLVQPNYFDDVMESPMFIPACFVVAAFLVLNLIVMRALTNIKV" gene 1667967..1668917 /locus_tag="SKA53_08501" CDS 1667967..1668917 /locus_tag="SKA53_08501" /note="COG2064 Flp pilus assembly protein TadC" /codon_start=1 /transl_table=11 /product="type II/IV secretion system protein, TadC subfamily" /db_xref="CDD:11772" /translation="MQAIQTLIIDILGPFGPLMVIGLVGFFMILLTLPVVFRRKQDPL DRLKAANRPTNKTERLRAASSKDTLEKYSNFLEPQNAAEYSAVKLKLLQSGYRSKNAV RIYHFVQFALGITGLFGGGIYSLIEMAQRTVNTQELIMMILVPGGIGYMFPKYWVTRR VEVRKEAIINAFPDSLDLMLVCVEAGQSLDQSILRVSNELRTGFPELAEEFEIVSQEA KAGKDKTTVLKDMAERCGVPDISSFVTVMVQSAQFGTSISDALRVYASEMRDKRVMRA EEAANKLPTKMTLATMMLTVPPLMAILIGPSIYAITTSLG" gene 1668932..1669492 /locus_tag="SKA53_08506" CDS 1668932..1669492 /locus_tag="SKA53_08506" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:5390" /translation="MGIHQTMLTVAVIALAACNAGDLNQSSDGTFAPGAVGLGNIDGL IVGHRLMTAGEFDLALKAYHRAAAQQGLNVDTMSAIGSANLNLGRLGQAEHWLQRAVA EDPTFPPAWNNLGVALMERGQVGEASEAFRRAFAADNGNSDEIRENLRLSLANLAEAD ENFAKDVQNFSLIRRGAGDFVLMSDL" gene 1669519..1670373 /locus_tag="SKA53_08511" CDS 1669519..1670373 /locus_tag="SKA53_08511" /note="COG0457 FOG: TPR repeat" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /db_xref="CDD:14140" /translation="MRHPVFIPLFATLIILSACDRSGEADLEQALRDINVVDETNLND VMLTVGDPDEAVNYFANANASDPGRIDLQRGLALSLIRARRVTEAVAAWQTVTAHPDA TDHDRLNLADAYIRGNLWDEAAATLNTIPPTFENFERYRLEAMVADSRQQWDKADSFY ETAVGLTTRPAPVYNNWGFSKLTRGDYPAAERLFSDALRFNPALFTAKNNLVLARGAQ RNYTLPVVTMTQVERAQLLHTMALTAIKQNDVTIGKSLLNDAINTHPQYFDAAVRALE ALENNAVN" gene 1670378..1670869 /locus_tag="SKA53_08516" CDS 1670378..1670869 /locus_tag="SKA53_08516" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14092" /translation="MGLTASAALWFLPAVVPIAIYVAWSDLRQMKIPNVAVYALVISF AVLGLIALPFGQYLWHWLHLPVMLVIGFILNMARVLGAGDAKFTAAAAPFIATTDLPL VLPLFAACLLAGLVTHRLVKISPLRRLVPHWQSWSETRRFPMGFPLAMTLVFYLSLVA VYR" gene 1671014..1672300 /locus_tag="SKA53_08521" CDS 1671014..1672300 /locus_tag="SKA53_08521" /note="COG0606 Predicted ATPase with chaperone activity" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10476" /translation="MAPPAPRSLDAMLLPMAMMRDILIKTMFRMNLDQVSQISRAICL PVAVTQELVDLARGQLLVEATGTLNANSSAEMGYRLTDAGRARALDALHQSEYYGPMP VPLSVYAEQVKRQSIRNTQITREQLTTAMGHLVLPADLLSHLGPAVGAGRSILMYGPP GNGKSSISNGIRDALGDKIYVPRAIAYSGQVITVYDPVVHSAAEDDVDDPTSLRRTAG RFDTRYVRCERPTVITGGELSLSMLDLVYNPTARTYQAPLQMKSTGGIFIVDDLGRQT EPPQMLVNRWIVPLEENRDILALQSGEKFEVPFDTLVVFSTNFHPNAIFDKAALRRIF YKIKIDGPNQEDYLKIFAMVARKRQMPLDEDTLVHLLNVRYPEINNIYANFHPTFLID HMISICDFEGIPYHMSPDLLDRAWANMFVTDEDIVR" gene 1672371..1674788 /locus_tag="SKA53_08526" CDS 1672371..1674788 /locus_tag="SKA53_08526" /note="COG1201 Lhr-like helicases" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase, DEAD/DEAH box family" /db_xref="CDD:10919" /translation="MPDATRHLPAKFDAWFAGRGWLVHPHQQAMLDRANDPALLLIAP TGGGKTLAGFLPSLVELADGAHQGLHTLYVSPLKALAADIKRNLRRPVEDMALPVRIE DRTGDTSYTQKRRQRADPPHILLTTPESLALLISYEDAPRMFAGLQRVIVDEIHALAE SKRGDQLMLALSRLQTLAPGLRRVGLSATVEDPPAIARMLARHPDPCPILLADPGPAP DIAMLQTDAPPPWAGGGANYAIPAVLEAVKQHKTTLIFHNTRAQAEIFFHNLWLANTD DLPIGIHHGSLAREQRERVESAMVAGQLRAIVCTGSLDLGIDWGDVDLVIQVGAPKNV KRLVQRIGRANHRYNAPSKALLVPANRFEVVECIAALQAVQAHDLDGDPKGAGPRDVL CQHILIAACAGPFHADDLFDEVCSVGAYTGLTRADFDACLDFCATGGYALRAYDRWKR LLQTADGKWQLRDPRAALRIRMNIGTIQDTDTLKVRLKGNFKPLGEVEESFAATLTQG DTFLIGGQIVRYDGLREMTVEVTRDASKTPKIATFMGTKFANSTQLSQRILRMFAQDD WPQLPAHTAAWLGLQRQVSKLPEVDRILVESFPHDGRQHICVYGFAGRNAMQTLGMLL TQRMEEMDLQPLGFVATDYAVLVWGLKPVTDAAPLFRAPDLRAGFETWLSGNAVMKRT FRGAATIAGLIERNLPQARKSGRQATFSSDILYDTLAKYDPDHLMLQITREEALRGLV DFGRIEEMLARTAGHVDHVALDRVTPLAMPLFLEQGRIALAGAGRERLMEDEAAALMA KIGLPAD" gene 1674785..1675471 /locus_tag="SKA53_08531" CDS 1674785..1675471 /locus_tag="SKA53_08531" /note="COG1407 Predicted ICC-like phosphoesterases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11122" /translation="MNLAPAWQISKENRMNSYAFTLCGTRCQALPSGALWLPEAGTLC VSDLHLGKSDRIARRSGVMLPPYEVQETLDKLADDIGATDPRQVICLGDSFDDLAAAG SLDRAMRLHLSSLQAGRKWIWIEGNHDPGPVDLGGSHLSQIEVGTLSFRHIATSATAE VSGHYHPKHRLAGRSRPAFVVDAKRIVMPAYGAYTGGLDCMSPTIRQLFGPRAIAILT GHKALAVPLA" gene complement(1675533..1676426) /locus_tag="SKA53_08536" CDS complement(1675533..1676426) /locus_tag="SKA53_08536" /note="COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase" /codon_start=1 /transl_table=11 /product="folD bifunctional protein" /db_xref="CDD:10065" /translation="MNAHVLDGKAFAAKLRITIADHVAALQAGHGIVPGLAVVLVGED PASQVYVRSKGKMTVEVGMRSFEHRLPDTTSEADLLGLIAQLNADPAVHGILVQLPLP GHLNSDLVINSIDPAKDVDGFHISNVGLLGTGQKAMVPCTPLGCLMLLRDHHGSLAGK HAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTADLPAMVRQADIVVAAVGRARMVPG DWIKPGATVIDVGINRIVADDGSTSLVGDVDYDSCAAVAGAITPVPGGVGPMTIACLL ANTVTACCRANGLAEPEGLTV" gene complement(1676587..1678263) /locus_tag="SKA53_08541" CDS complement(1676587..1678263) /locus_tag="SKA53_08541" /note="COG2759 Formyltetrahydrofolate synthetase" /codon_start=1 /transl_table=11 /product="formate--tetrahydrofolate ligase" /db_xref="CDD:12151" /translation="MAVKSDIEIARAATKRPIQDIGAKLGIHSDDLVPYGHDKAKVSQ RLIDAVQDRPDGKLILVTAINPTPAGEGKTTTTVGLGDGLNAIGKKAVVCIREASLGP CFGMKGGAAGGGYAQVIPMEDMNLHFTGDFHAITSAHNLLAAMIDNHVYWGNTLDIDI RRVVWRRVMDMNDRALRQITASLGGVANGFPREAGFDITVASEVMAILCLARNLADLQ KRLGDIIVAYRRDKTPVYCRDLKADGAMTVLLKDALQPNLVQTLENNPAFVHGGPFAN IAHGCNSVTATTTALKLADYVVTEAGFGADLGAEKFMNIKCRKAGIAPACVVVVATVR AMKMNGGVAKADLGFENVAAVQAGCANLGRHIENVKSFGVPVIVAINHFVSDTEAEVD AVKAYVASQGSEALLCKHWAQGSAGIIDLATRVAEIADLDAANFAPIYPDAMPLFDKM QTIAQKIYRADGVIADDKIRDQLAQWENQGYGHLPVCMAKTQYSFTTDPERRGAPTGF TIPVREVRLSAGAGFIVAICGEIMTMPGLPRVPSAETIMLNEDGQIEGLF" gene complement(1678367..1678945) /locus_tag="SKA53_08546" CDS complement(1678367..1678945) /locus_tag="SKA53_08546" /codon_start=1 /transl_table=11 /product="MOSC domain protein" /db_xref="CDD:26090" /translation="MPALKKTETIGEVVWLGLVPDRDAALTSVAVQDARLTYAGIPGE AHGGLTRPSCSRVISQHPRGTQIRNVRQLCVMSAEELALIAADCGLDDLDPAYAGASL VVRGIPDFTHLPPSSRLQFPDGSVIVVDMENQPCHLPAKAINADHPGAGDRFKAAAKG RRGVTAWVEREGFVRVGDAVTLHVPGQRSWQP" gene complement(1679100..1680995) /locus_tag="SKA53_08551" CDS complement(1679100..1680995) /locus_tag="SKA53_08551" /note="COG0465 ATP-dependent Zn proteases" /codon_start=1 /transl_table=11 /product="ATP-dependent metalloprotease FtsH" /db_xref="CDD:10338" /translation="MVFWVVMFLMVLALFNLFSSPPGATGGDARSFSTFVEAVQSGRV TDAVIDGERVRYSEAGRTYSTIAPSDAEITNLLIGANVPFEARSQETSVFQSFLVSLL PFVLLIGVWVYFMNRMQGGGKGGAMGFGKSKAKLLTEKSGRVTFDDVAGIDEAKEELE EIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVE MFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRARGVGMGGGNDEREQTLNQLLVE MDGFEANEGVIIVAATNRRDVLDPALLRPGRFDRQVTVPNPDIKGREKILGVHARKVP LGPDVDLRIIARGSPGFSGADLANLVNEAALMAARVGRRFVTMVDFESAKDKVMMGAE RRSMVMTAEQKEMTAYHEAGHAIVGISLPKCDPVYKATIIPRGGALGMVMSLPEIDRL NMFKDECHQRLAMTMAGKAAEIIKYGPDSVSNGPAGDIQQASQLARAMVLRWGMSDKI GNIDYAEAHEGYQGNTAGLSVSADTKVMIEEEVRRFIQDGYELAYKIITEKNEEFERL AQGLLEYETLTGDEIKRVMAGELPHASDDKGGTPPSAGSSVTAIPKTKPKKPRAPDGG LEPEPSV" gene complement(1681122..1682300) /locus_tag="SKA53_08556" CDS complement(1681122..1682300) /locus_tag="SKA53_08556" /note="COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control" /codon_start=1 /transl_table=11 /product="PP-loop family protein" /db_xref="CDD:28416" /translation="MLAPGFAQLLQGGTPVGLAVSGGGDSIALLHLAAAIGGRISVAS VDHGLRPESAAECGMVADICTSYGLPHQTLKWTGWDRRGNLQDQARRARYGLLADWAR AAGVANIALGHTADDQAETIVMALARGAGVGGLAGMAAVMSRDGLHYHRPLLQVTRVA LRAYLVATGRVWCDDPSNDDPAYERIRIRQAADTLAELGLTSQTLGQVAQHMATATEA LDRGTADLAAAVMMPQSGDVLIMLALRDLSREQARRLVLAAMERVHRRITPPRKDEQQ RLMHALLQGQGVTLGGCLMTFDGPVLRVSREPQAVAQIVTPTTALWDARWRLSGPHAP DLQLRALGAGIELCCDWRRSGLPRRSLQATPAVWRDQTLVSAPLAGFGGDWSAQIVAD " gene complement(1682315..1683136) /locus_tag="SKA53_08561" CDS complement(1682315..1683136) /locus_tag="SKA53_08561" /note="COG1729 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11440" /translation="MMLHRILAVCAILLAPLPASAQDETLADIRQQLTALYVDVQRLR TELSTTGTLPTGVAGATPLDRLDAIEAELQRLTSKAEELEFRVNRITVDGTNRIGDLE FRLCELEQGCDIANLGDTPSLGGVDNSAGVPVANPPPVTGGPAVAIGEQDDIRRAQEA LASGDFRGAVDQLSTFGTTYPGSPLAPEAAFIRGQALAALGEDTGAARAFLESFSADP AGQRAAQSLVRLGASLGAIGQTQDACLTLAEVGVRFAGNPAVGDAQTAMQNLGCQ" gene complement(1683154..1683684) /locus_tag="SKA53_08566" CDS complement(1683154..1683684) /locus_tag="SKA53_08566" /note="COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins" /codon_start=1 /transl_table=11 /product="peptidoglycan-associated lipoprotein" /db_xref="CDD:12236" /translation="MKMMTKATLLLLVLATAACTNPNRFGAGGAGGAGAGAGGFDATT GMAGSASDPRSPAFFNQTIGDRVLFAIDQSTISPEGRTILDGQAQWLLTNADYRAVIE GHADEQGTREYNLALGFRRANAVREYLVSRGVPSARLEVTSYGKERPIEVCSNEACYS QNRRAVTVLSFSAMTS" gene complement(1683763..1685079) /gene="tolB" /locus_tag="SKA53_08571" CDS complement(1683763..1685079) /gene="tolB" /locus_tag="SKA53_08571" /note="COG0823 Periplasmic component of the Tol biopolymer transport system" /codon_start=1 /transl_table=11 /product="translocation protein TolB precursor" /db_xref="CDD:10690" /translation="MMKRILTLLIALMFAGPAFAQGGPLRLTITDGVIEPITFAVPSF EAETPQAGQLASELTRLVAQNLSGTGLFREVPASAFISQVGSFAQPVAFADWRAVNAQ ALVIGAVSMTGDQVNVKFRLFDVFSGQELGGGLQFAGTTAGWRRMGHKVSDAVYSRIT GEGGYFDSRVVFVAESGPKDNRLKRLAVMDYDGANVQFLTDSSSIVLAPRFSPRGDQV LYTSFESGFPRINLLDVADVARRQIATAPGEMSFSPRFSRDGRQVIYSLSNGATTDIY RTDLDTGQHVRLTATPSIDTAPSLSPDGSQIVFESDRSGSQQLYIMSSTGGDARRISF GEGRYSTPVWSPRGDLVAFTKQNAGRFHIGVMRTDGSEERLLTSSFLDEAPTWSPNGR VIMFTRETQGADGASALYSVDISGRNLRAVPIQSAASDASWGPLQP" gene complement(1685180..1686325) /locus_tag="SKA53_08576" CDS complement(1685180..1686325) /locus_tag="SKA53_08576" /codon_start=1 /transl_table=11 /product="tonB domain protein, putative" /translation="MTVPTDKMQTPGMYISAVGHLGLIGWLLLGWGMQSQPLPMQVMD VSVMSGEEFEQMMAARTPTPGDAPPTAPVQPQIEQTPPPPAVETPPEPAPVPLPVETP VSEAPPPPAPEMPPADVTDAAPAAPAPPEMPAPAPDLPPSDDPTQAPANRIASTPTAP PPPDAQISDIAREAVVPDETATAEVAVPEQQATAPEQTATEIVIADERPRGAVETSIR PIARPARPAPPAPEQETATAEPTPDPAPTPAPVPDTSDAVADALAAAVASSAAPAVQA GPPMTGSERDSFRIAVNSCWNVDPGSVAARVIVEVGFTLNRDGTLDGEPRLLSSDGDQ SATSTAFEAARRAILRCQRGGYQLPADKYDQWREVVITFDPSGMRLR" gene complement(1686306..1686782) /locus_tag="SKA53_08581" CDS complement(1686306..1686782) /locus_tag="SKA53_08581" /note="COG0848 Biopolymer transport protein" /codon_start=1 /transl_table=11 /product="ExbD/TolR family protein" /db_xref="CDD:10714" /translation="MGAGAMKSSDGGGGRGRRRQRRAVPMSEINVTPFVDIMLVLLII FMVAAPLSVVGVPVDLPQTAATALPGDEEEPLTVTITAQGVVMIQETEVPPADLVTRL RAIAAERTSNKIFLRADGANAWNRVAEVMGALNAGGFSDIGLVTDIGGPTFDGADG" gene complement(1686784..1687458) /locus_tag="SKA53_08586" CDS complement(1686784..1687458) /locus_tag="SKA53_08586" /note="COG0811 Biopolymer transport proteins" /codon_start=1 /transl_table=11 /product="proton transporter TolQ" /db_xref="CDD:10678" /translation="MEVAHEFTMWALFARATIIVKLVMIMLILASIWCWAIIVDKTIQ YRRARTEAEIFDRAFWSGEPLDQLFDQIGPDPDGASEKIFAAGMLEWRRSHRQDGGLI AGATARIDRSMDVAIAKETARLQKSLAVLATVGSTAPFVGLFGTVWGIMNAFIEIAEA QNTNLAVVAPGIAEALLATGLGLLAAIPAVIYYNKLSADSERIVAGYEAFADEFATIL SRQLDS" gene complement(1687569..1687952) /locus_tag="SKA53_08591" CDS complement(1687569..1687952) /locus_tag="SKA53_08591" /note="COG0824 Predicted thioesterase" /codon_start=1 /transl_table=11 /product="Putative thioesterase" /db_xref="CDD:10691" /translation="MHLFNLRVYYEDTDLAGIVYYANYLKFIERARSEWVRDLGIDQA QMKAEGRVFAVRRVAADYLLPARYDDLLCVETKLLPGSGARLVLQQDVKRGDATLFSA MVTIICMTTDGAIARLPAAIRQAMG" gene complement(1687952..1688569) /locus_tag="SKA53_08596" CDS complement(1687952..1688569) /locus_tag="SKA53_08596" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDLSPYFTRSDGAYVFARWGRPIVPVVFGVDDATLSVFKGAIE AVVVLACHKMDEVDTELGANLMVFFCRDWAELTEVPHLDRLVPDLAPLVARLQQADAN QYRIFRFDDHGGIKAAFVFLRLDAHLDQVPADTLALSQAVQVIVLWSDLAFTDTPPLA LVDGKAVLRPEVADVIRAAYDRVMPIAARDPAHALRLAARVQRPM" gene complement(1688570..1689589) /locus_tag="SKA53_08601" CDS complement(1688570..1689589) /locus_tag="SKA53_08601" /EC_number="3.1.22.4" /note="COG2255 Holliday junction resolvasome, helicase subunit" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase RuvB" /db_xref="CDD:11961" /translation="MTQPDPTLRPERQPEDADRALRPQTLDEFIGQREARANLKVFIE SARRRGEAMDHTLFHGPPGLGKTTLAQIMARELGVGFRMTSGPVLAKAGDLAAILTNL EARDVLFIDEIHRLNPAVEEVLYPALEDFALDLVIGEGPAARTVRIELQPFTLVGATT RMGLLTTPLRDRFGIPTRLEFYTQDELHLIVTRAARLLGAPAADEGAREIARRARGTP RIAGRLLRRVVDFAIVEGDGTVTQEIADMALNRLGVDDMGLDQADRRYLRLIAESYAG GPVGIETLSAALSESRDSLEDVIEPYLLQKGLIQRTPRGRMLAQAAWTHLGLDAPRPQ SELFG" gene complement(1689598..1690254) /gene="ruvA" /locus_tag="SKA53_08606" CDS complement(1689598..1690254) /gene="ruvA" /locus_tag="SKA53_08606" /note="COG0632 Holliday junction resolvasome, DNA-binding subunit" /codon_start=1 /transl_table=11 /product="Holliday junction DNA helicase motor protein" /db_xref="CDD:10502" /translation="MIGKIAGRLEYRSTDHVLIDVRGVGYLVYVSDRVMASLPRNGEA VALYTDLLVREDLLQLFGFTTLVEKEWHRLLMSVQGIGAKASLAILGALGADGVSRAI ALGDWNAVAKARGVGPKTAQRVIIELKDKAPGVMALGAGLSAATGDEVIEADPAPAPR ATPQPASTAQADAMSALANLGYAPGDAASAVVQALGADPQADAGVLIRAALQLLAPKG " gene complement(1690251..1690757) /gene="ruvC" /locus_tag="SKA53_08611" CDS complement(1690251..1690757) /gene="ruvC" /locus_tag="SKA53_08611" /EC_number="3.1.22.4" /note="COG0817 Holliday junction resolvasome, endonuclease subunit" /codon_start=1 /transl_table=11 /product="Holliday junction resolvase" /db_xref="CDD:10684" /translation="MRVLGIDPGLRNMGWGLIDVAGSRITHVANGIAHSTGDDLAMRL LSLHDQLAAMIALHRPTQAAVEQTFVNKDGVGTLKLGQARGIALLVTAQAGLTIGEYA PNAIKKAVVGVGHADKVQIAHMVKLQLPGVKLAGPDAADALAIAICHAHHLQSANRLN AALAKASA" gene 1691046..1691249 /locus_tag="SKA53_08616" CDS 1691046..1691249 /locus_tag="SKA53_08616" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14541" /translation="MAMATFATNRTTAGMSAGFVVYIIGAFAAWNDARITRNALSKLS ARELDDIGLCISDIDMIASRTAR" gene complement(1691305..1691658) /locus_tag="SKA53_08621" CDS complement(1691305..1691658) /locus_tag="SKA53_08621" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAQANLPFEKRLKQITRKHDQLAKGAIKSVTSDGLIVMKPRAYR PKFPLRAMIAVVVLGFMFKGLLLASIGNVAYAERVASLAQGGVMDRAGAWVMQIDPAT VLIGDFLAPYLGDLR" gene complement(1691746..1692609) /locus_tag="SKA53_08626" CDS complement(1691746..1692609) /locus_tag="SKA53_08626" /note="COG2264 Ribosomal protein L11 methylase" /codon_start=1 /transl_table=11 /product="ribosomal protein L11 methyltransferase, putative" /db_xref="CDD:11970" /translation="MPGEDAAYALSEALEHLDPEPIGTGVFEIEDGSGLWEVAAYMTD RPDAGVLAVLSALHGAKPFTISEIPDQDWVSKVQRDLAPVPAGRFFVYGSHDADKVPQ DSIPLLIEAAMAFGTGHHGTTLGCLLAFEQVLDLGFTGGRILDLGCGTAVLAMAAAKV LGGPVLASDIDPVAIDVARANVTANALDGQVDCLVAAGFGGGDPRMTGPFDLIFANIL KGPLISLAPEISGNMQPGGYLILSGLLNEQADEVIHTYASNGFDLCKMSRIGDWATLI VRRQSLISSNL" gene complement(1692689..1693339) /locus_tag="SKA53_08631" CDS complement(1692689..1693339) /locus_tag="SKA53_08631" /note="COG0225 Peptide methionine sulfoxide reductase" /codon_start=1 /transl_table=11 /product="Peptide methionine sulfoxide reductase" /db_xref="CDD:25795" /translation="MFFMKSAKSEMISPTAALPGRANPIPTAATHFVYGTPISADVPA GMEVAIFGMGCFWGVERMFWKLDGVQSTMVGYAGGYTPNATYDEVCTGKTGHNEVVRV VYDPGVISYDQLLQVFWEGHDPTQGMRQGNDRGTQYRSGIYTFNAAQKQAADASRDAF APRLTQAGFGAITTEIIDAPTFYFAEDYHQQYLAKNPNGYCGIGGTGVTCPIGVGA" gene complement(1693389..1694618) /locus_tag="SKA53_08636" CDS complement(1693389..1694618) /locus_tag="SKA53_08636" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MQIIRLENTPSLPFWRRPIALLFVMAMAMPVAFATWSALLNNFV IEVAGFDGADIGWLHSVREIPGFFAIGVIALIMFIREQVLGLVALVMLGAATAVTAQF PSMAGILTVTMLSSIGFHYYETVNQSLQLQWIDKNKAPQTLGWLLSAGSAATLLVYLL IVLTWDRLGLSFSLVYWVSGGFTAVVAIFCLLAYPQFESPHPQNKRMVLRQRYWLYYA LQFMSGARRQIFVVFAGFMMVERFGFSVSDITRLFMFTLLVNMIAAPFLGRLVQVFGE RRAMVVEYVGLTGVFFAYGGLYYFGWGIALATGLYIINHIFFSLALAMKTYFQKIADP ADIAPTAAVAFTINHIAAVFLPALLGYVWLTSPAYVFMLAAGMALVSLGLSLLIPRHP APGHETVFQNRLLAAAE" gene 1694838..1696157 /locus_tag="SKA53_08641" CDS 1694838..1696157 /locus_tag="SKA53_08641" /note="COG0348 Polyferredoxin" /codon_start=1 /transl_table=11 /product="iron-sulfur-binding protein, RdxA/RdxB/FixG family" /db_xref="CDD:10222" /translation="MAVTLGIYYLTPWIRWDRGPNLPDQAVLIDMAHRRFYFFWIEIW SHEFYFVAGLLIMAGLGLFLFTSALGRVWCGYTCPQTVWTDLFILVERWIEGDRNARV RLWNAKWDARKIRLRATKWSVWLLIAVATGGAWVFYFADAPTLARDLATFQAPFVAWA TIGVLTATTFVFGGFMREQVCNYMCPWPRIQAAMMDPETLTVAYRDWRGEPRGKQRVE GAGDCIDCMACVNVCPAGIDIRDGQQMECITCALCIDACDDVMAKIGKPRGLIDYLAL SDQEAEANGKPAKPIWAHVLRFRTVLYTVLWALIGVGLVFAMFIRADLEMTVSPVRNP TFVVLSDGTVRNIYDIRLLNKLGDDRVFALSLVSDQPLDIRLEGADLNIVTVPANETM LQRVYVSAVAGTPAAVADRIDLRFWVEDAITGERAFTESIFNGRAAQ" gene 1696154..1696624 /locus_tag="SKA53_08646" CDS 1696154..1696624 /locus_tag="SKA53_08646" /codon_start=1 /transl_table=11 /product="fixH protein, putative" /db_xref="CDD:23975" /translation="MTANLQKPREFTGKHMLAVMLGGFGIIISVNLGMAYLAISTFPG VEARSTYVASQTFEANRTAQDALGWDVVATLDDGLLTLAIQDADSIPVQPKVQKAIFG RATHTGEDHTPDFTWTGTALIAMVPSRDGYWNLRLELESADGTIFRRRIQLRDR" gene 1696621..1698768 /locus_tag="SKA53_08651" CDS 1696621..1698768 /locus_tag="SKA53_08651" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="copper-translocating P-type ATPase" /db_xref="CDD:11924" /translation="MSDTAACPACIGIPEGALKKAASRGAEQIMLSLPAIHCVACITG VERALEKLDGVASARVNLSMKRVTIGLDQPLAPEALIDALELAGFEARSLDQSLLSAE KDPVGSALMTRIAVSGFAMMNVMLMSVAIWSGAVGATQHMFHLLSAAISIPAVAYAGQ PFFQHAWSALRVRRLNMDVPISLALILTTGMSLFETLYGGEHAYFEAAVSLVFFLLIG RYLDHRSRKAAASAAAQLAALEVPRVMRLRDGAREMVDFADLAVGDLVLVLPGGRIPV DGEVTDGASQIDRSMLTGESRLHHAATGGQVTAGEVNMTGPLTIRAATVGMDTTLRKL VTMVDAAEAVRNKYTAIADRAAALYAPMVHLLALATFTGWVLWSGDVRLSVNIAVAVL IITCPCALGLAVPAVSTIAAGRLFRAGLLVKDGTALERLAEVDTVVFDKTGTLTMPVA ARDTLTADEQAIALAMTQNASHPVSQAIAAALDGVTPATVTDQKEHSGQGLSAVWNGQ IIRLGSGAWLGAGVGTYLQIGQLTPRKIKLLAGLRDGAQDLVIAWQKAGLTVHLVSGD DRAETERVADLLGITRWQAETQPENKITYINALSAQGAKVLMVGDGLNDTGALTAAYA SLSPATAADASRAASDIVLLNDSLVPLIELPLVARAAKKRIVENFGISAAYNIIAIPI AVAGFATPLLAAIAMSTSSITVLVNALRMKGRV" gene 1698765..1698920 /locus_tag="SKA53_08656" CDS 1698765..1698920 /locus_tag="SKA53_08656" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:5639" /translation="MNVLVILIPVSLVLGALGLAAFLWSLRANQYDDLEGDAWRILSD DDSKPPN" gene 1699110..1699394 /locus_tag="SKA53_08661" CDS 1699110..1699394 /locus_tag="SKA53_08661" /note="COG0234 Co-chaperonin GroES (HSP10)" /codon_start=1 /transl_table=11 /product="Chaperonin Cpn10 (GroES)" /db_xref="CDD:7494" /translation="MAFKPLHDRVLVRRIESDTKTKGGLLIPDTAKEKPAEGEIVSVG EGARKDSGELIPMAVKAGDTVLFGKWSGTEVRIDGEELLIMKESDILGIM" gene 1699440..1701095 /gene="groEL" /locus_tag="SKA53_08666" CDS 1699440..1701095 /gene="groEL" /locus_tag="SKA53_08666" /note="COG0459 Chaperonin GroEL (HSP60 family)" /codon_start=1 /transl_table=11 /product="chaperonin GroEL" /db_xref="CDD:10332" /translation="MQMAAKEVKFGTDARNRMLKGVNILADAVKVTLGPKGRNVVIDK SFGAPRITKDGVSVAKEIELEDKFENMGAQMVKEVANRTNDEAGDGTTTATVLAQAIV REGMKSVAAGMNPMDLKRGIDLATSKVVEAIKAAARPVNDSDEVAQVGTISANGESEI GRQIADAMQKVGNEGVITVEENKGLETETVVVEGMQFDRGYLSPYFVTNPEKMTVELE DAIILLHEKKLSSLQPMVPLLESVIQSGKPLLIISEDVEGEALATLVVNKLRGGLKIA AVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGSAKRISITKDETTI VDGAGNKAEIEARVAQIRGQIEDTSSDYDREKLQERVAKLAGGVAVIRVGGMSEVEVK ERKDRVDDALNATRAAVQEGVVVGGGVALIQAGKVLEGLKGANSDQDVGIAIIRKAIE APLRQIAENSGVDGSVVAGKIRESNDKSFGFNAQTEEYGDMFKFGVIDPAKVVRTALQ DAASVAGLLITTEAMIADKPSKDSGNGGGMGDMGGMGGMGGMM" gene 1701377..1702774 /locus_tag="SKA53_08671" CDS 1701377..1702774 /locus_tag="SKA53_08671" /note="COG3210 Large exoproteins involved in heme utilization or adhesion" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MADKSFTYTNNFDGGENVSGSLSVTVRPGQASQTTGTNTQIRDS ANDGDNDNELIVYSGRQVGGFAEFADERFDAVGGQPSDARATSFTMTANVDIVPSNVN SSGNGQIDGFSFNFGRTSTLPAAGDGVTSAQQGSLEQGLSTGLSIRVMPFNQSIQIVW NGNVLNQLNGLTNLENLAAGQMTVSVQENGLVNVNFNGIQLNAMIPSVDGKSGLTAAD QTDWGFSFAGRTGGNAGEIWVDDIALTGRIVCFTKGTMIATASGAKAVEDLQPGDLVL TRDHGLQPIRWAGHWQADAAKLALQPSLQPVLIRKGALGRDMPASDMMVSGQHRIMVA SAIVERMFDAQEMFVAAKHLIGLPGVESAALNDGVTYYHILCDAHEIVWANGAWAETL LIAPEMYESLPWSSVTRIFQLFPNLKALLDNPQPARPSMTRKQAAKMVQRHVHNDKPL VTNDFASPKGVRAAG" gene 1702854..1703705 /locus_tag="SKA53_08676" CDS 1702854..1703705 /locus_tag="SKA53_08676" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MDSDVIRIFVLLAVTMSAFAANSVLNRLGVARYGMDPMDFAAIR VVAGGLMLWVLVGLRGTARPPLWSGRRIGGAVCLAGYMVGFSWAYLSLDAGIGALILF GVIQVVIFGWSVAAGQVIPPRRWLGAMVAFGGLCVLLWPSGAQALPWGGATAMIIAGM AWAGYTLLGRGEPDALGASAANFVLCLPLVLLVLPLSDAGQLSVAGVATAAIAGAVTS GLGYALWYHILPQIAATLAGIAQLSVPVLTVAAGALLLAEPVTAQLIIAGMLVLGGIA IALPARR" gene 1703761..1704486 /locus_tag="SKA53_08681" CDS 1703761..1704486 /locus_tag="SKA53_08681" /note="COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold" /codon_start=1 /transl_table=11 /product="lipase, putative" /db_xref="CDD:10798" /translation="MKTFVASVMMAFVAAPVVAQDCVVMLHGLARTEISMTAMALVLE GEGYRVVNRGYPSTESTIPNLVADYVTEDVAACGDSRVNFVTHSMGGILVRAWLTNNR PEKMGRVVMLGPPNGGSELVDIFGDFEPFQWVNGPAGLQLGTQEDSFPNSLDYLPFQI GIIAGNRSLNPVYSALIEGPDDGKVSVNSTRLDGMADHIVLPVTHTFMMNNPVVITQV LEFLRNGRFDPDLTMTDVILGTE" gene complement(1704531..1705598) /locus_tag="SKA53_08686" CDS complement(1704531..1705598) /locus_tag="SKA53_08686" /note="COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole carboxylase, ATPase subunit" /db_xref="CDD:9902" /translation="MNNALPIGATIGILGGGQLGRMLAVAAARLGLKVHIFEPSANPP AGDVAHRVTTASYEDHAALTAFGQSVDVITYEFENIPTSALDLLETLAPIHPGRQALA TSQDRLIEKTFLQGLGLQTAPFADVPDMAALDVAIASIGAPAILKTRRMGYDGKGQSR IKTAQDAPRALADMAEAPAILEGFVNFTHEVSVIGARGQDGSVACYDPGENVHQDGIL RTTKVPANLTASQRTDAVLIAARILNALDYVGVMGVELFVTPQGLIVNEIAPRVHNSG HWTQNGCTICQFEQHIRAVAGWPLGDGSRHADVIMENLIGNDMDRLGDYAKTDAAIHL YGKAEVKPGRKMGHVNRIFRA" gene complement(1705591..1706079) /locus_tag="SKA53_08691" CDS complement(1705591..1706079) /locus_tag="SKA53_08691" /note="COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase" /codon_start=1 /transl_table=11 /product="phosphoribosylaminoimidazole carboxylase, catalytic subunit" /db_xref="CDD:9916" /translation="MTHPLVGIIMGSQSDWPTMREAADMLDQLGVVYEKRIVSAHRTP DRLWDYGKTAATRGLQVIIAGAGGAAHLPGMMASKTRVPVIGVPVQTKALGGVDSLYS ILQMPRGFPVATMAIGAAGAANAGLMAVGILALQDPALAARLDAWRAALSAAIPEEPV DE" gene complement(1706147..1706365) /locus_tag="SKA53_08696" CDS complement(1706147..1706365) /locus_tag="SKA53_08696" /note="COG2841 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTTFAKMDEIDVLRVKLEMLKRQHRDLDSAIDALHDRASTDMLT IKRLKKQKLALKDQIVVLEDRILPDIIA" gene 1706524..1706937 /locus_tag="SKA53_08701" CDS 1706524..1706937 /locus_tag="SKA53_08701" /note="COG0071 Molecular chaperone (small heat shock protein)" /codon_start=1 /transl_table=11 /product="heat shock protein, Hsp20 family" /db_xref="CDD:9946" /translation="MTKMALGTHPFLLGFEQLERLVERTAKTGNDGYPPYNIEQTCAT SYRITLAVAGFAESDLAITVEDNSLVIRGRQRDDSEGRIYLHRGIAARQFQRSFVLAD GVDVGEAVMENGLLHVDLTRSVPDRVVQTIKIRKG" gene 1706941..1707165 /locus_tag="SKA53_08706" CDS 1706941..1707165 /locus_tag="SKA53_08706" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNMKYDLKTLGQDIVYVKPVLTADLPDEVRAEIGDLREVFAVHN TKGEQLALVADRKLAFHLARENHMHPVTVH" gene complement(1707225..1708934) /locus_tag="SKA53_08711" CDS complement(1707225..1708934) /locus_tag="SKA53_08711" /EC_number="2.7.7.4" /note="COG2046 ATP sulfurylase (sulfate adenylyltransferase)" /codon_start=1 /transl_table=11 /product="binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein" /db_xref="CDD:15394" /translation="MPPDLAPIPELYVSYESAQKLKAEAGDLVSHDLTPRQICDLELL MNGGFNPLKGFLSEADYTSVVDTMRLADGALWPMPVTLDVSEGFADKVTIGQDIALRD QEGVILATMTVTDKWVPNKAHEAEKVYGADDSAHPAVNYLHNTAGGVYLGGPVTGIQQ PVHYDFRGRRDTPNELRALFRKLGWRKVVAFQTRNPLHRAHQELTFRAAREAQANLLI HPVVGMTKPGDIDHFTRVRCYEAVLDQYPSATTTMSLLNLAMRMAGPREAVWHGLIRK NHGCTHFIVGRDHAGPGKNSAGQDFYGPYDAQDLFREHQDEMGIEMVDFKQMVYVQDR AQYEPADEIADKDKVTILDISGTELRRRLAEGLEIPEWFSFPQVVAELRKSRPARAKQ GFTVFFTGFSGSGKSTIANALMVKLMEIGGRPVTLLDGDIVRKNLSSELGFSKEHRDL NIRRIGYVASEITKNGGIAICAPIAPYATTRRAVREDVEQFGAFIEVHVATSIEECER RDRKGLYKLARAGKIAEFTGISDPYDVPDHPELRLDTENQSVDGCAHQVLLKLESLGL IKG" gene complement(1709123..1710199) /locus_tag="SKA53_08716" CDS complement(1709123..1710199) /locus_tag="SKA53_08716" /note="COG0492 Thioredoxin reductase" /codon_start=1 /transl_table=11 /product="thioredoxin-disulfide reductase" /db_xref="CDD:10363" /translation="MRNNISHFSNNRTRCLALPTGGSERYIKTISSKRSAMSATRHTR VLIIGSGPAGYTAGVYAARAMLEPLLVQGMEPGGQLTTTTEVENWPGDTEVQGPDLML RMEAHARAMGCEIVQDIITSLDLQNRPFTAQSDSGTVYTADAVILSTGARAKWLGLPT EDKFKGFGVSACATCDGFFYRGQEIVVVGGGNTAVEEALFLTNFASKVTLIHRRDELR AEKILQQRLENNPKIETLWFHEVEEVFGTDSPLGVEGIRVRDVRNGAISEIAAKGVFI AIGHAPASELVQGQLETHNGGYVVVEPGTTRTAIPGVFAAGDLTDHVYRQAVTSSGMG CMAALDAERFLAAAHDMQDIKAAE" gene 1710233..1710745 /locus_tag="SKA53_08721" CDS 1710233..1710745 /locus_tag="SKA53_08721" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="Proline dehydrogenase transcriptional activator" /db_xref="CDD:11236" /translation="MGNPMPGTKLDEIDRMILAQLQADGRMTNVELASRVGISAPPCL RRVRTLEEQGFITGYHADVNARELGFEVQVFAMVGLVSQAEADLSAFERKCISWPLVR ECHMLNGEVDFILKCVAPDLRSFQRFLTEELTSADNVASVKTSLVIRGAKDEPGVPFD VLEARLAQQA" gene complement(1710879..1711751) /locus_tag="SKA53_08726" CDS complement(1710879..1711751) /locus_tag="SKA53_08726" /note="COG2010 Cytochrome c, mono- and diheme variants" /codon_start=1 /transl_table=11 /product="Cbb3-type cytochrome c oxidase CcoP subunit" /db_xref="CDD:11718" /translation="MSSHDHTDIDDVTGTDTTGHSWDGIKELNNPLPRWWLWTFYITI VWGVGYTIAFPAWPLISSATSGMLGYSTRGEVAQDIARFEQANSAIMAQLASADLGTL DQTPELMRFATSAGAAVFRNNCSQCHGSGAAGAVGYPNLLDDDWLWGGDFENIAYTVR HGIRNEEDWDARYSMMTAFDEILSNGEIDAVVNHVLAISGQTYDATLAAAGSALFLDN CAACHGDAGTGDRNQGAPNLTDAIWLYGGDPETLEQTIRYARFGVMPPWSPRLSEAEI RAVTAYVHQLGGGE" gene complement(1711748..1711963) /locus_tag="SKA53_08731" CDS complement(1711748..1711963) /locus_tag="SKA53_08731" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, cbb3-type, subunit IV" /db_xref="CDD:28694" /translation="METPTLLQQIADNWLLVWMGTFFIGVILWVLRPGSRTQYADTAN IPFRNEDRPAPRKDADGVARDTKELQS" gene complement(1711975..1712730) /locus_tag="SKA53_08736" CDS complement(1711975..1712730) /locus_tag="SKA53_08736" /note="COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, cbb3-type, subunit II" /db_xref="CDD:8302" /translation="MSETPTTPTKGFLAKHAILERSPTLLLVSSLVVVAIGGLVEIVP LFYLENTIEKVEGVRPYSPLELAGRDVYIREGCYLCHSQMIRPMRDEVERYGHYSLAA ESMYDHPFQWGSKRTGPDLARVGGKYSDAWHLDHLIAPRSVVPESIMPGYAYLLDTYV NADYTADLVRTHRIVGVPYTEGMIAVAATDVLAQADPETDAYDDLLARYPGAQIRNFD GRPGVSEMDALIAYLQMLGTTVDFSTFTPDASR" gene complement(1712743..1714356) /locus_tag="SKA53_08741" CDS complement(1712743..1714356) /locus_tag="SKA53_08741" /note="COG3278 Cbb3-type cytochrome oxidase, subunit 1" /codon_start=1 /transl_table=11 /product="cytochrome c oxidase, cbb3-type, subunit I" /db_xref="CDD:12614" /translation="MDKGNSMGNYFKLAALGIIALFAAMAANWGRDAAYIVHAIIILG VSGFMFIRVLRQMEQPAMATPTGYMDDVVRAGVVATTLWGVIGFLVGVIIAFQLAFPQ LNFEMLQPYGNFGRLRPLHTSAVIFAFGGNALIMSSFYIVQRTCGARLWGGNLAWFVF WGYNLFIVLAATGYLLGATQSKEYAEPEWYTDMWLTVVWIAFLAVFLGTLFKRQERHI YVANWFLLAFIVTVAMLHVVNNLSIPVSIWGSKSVQIFSGVQDAMVQWWYGHNAVGFF LTAGFLGMMYYFVPKQAGRPVFSYKLSIIHFWALIFLYIWAGPHHLHYTALPDWASTL GMVFSIILWMPSWGGMINGLMTLQGAWDKLRTDPIIRMMVISLAFYGMSTFEGPMMSI RAVNSLSHYTDWTIGHVHSGALGWNGMITFAALYFLTPKLWGRAQMYSMSAINWHFWL ATIGIILYAASMWVTGIMEGLMWREVDANGFLVNSFADTVSAKLPMYIVRGLGGVLYL AGGIIMAWNIYMTIRGGVKVTAALGVPAE" gene 1714414..1714566 /locus_tag="SKA53_08746" CDS 1714414..1714566 /locus_tag="SKA53_08746" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRSLMWINPSFDMDQCITPRHTAWIGEGPVRANDRSLTRLMTGK GQTDGI" gene 1714556..1715389 /locus_tag="SKA53_08751" CDS 1714556..1715389 /locus_tag="SKA53_08751" /note="COG0589 Universal stress protein UspA and related nucleotide-binding proteins" /codon_start=1 /transl_table=11 /product="universal stress protein family protein" /db_xref="CDD:10459" /translation="MAYKIISTVLTDSDASTEGLDAAITLAARMDAHLEIFVVTICHS ETHNYFMGAEAMTIERQTRDAMAEREKLDAWVNDRMQGEPVRWALQSATVQGPALTPY LARKLRFSDLVVLPRPYQDNPDAEALVEACLFAAERPVLMIPKGCKAPAAGGHIVMGW NDAAEALAAARAALPLLQQADVADICIIDPPMHGADRSDPGGAMAQYLMRHGTRSEVA VLAKTEPHVGEILLRRAREVGAHLIISGAYGHSRLREAVFGGATRSLLERADRPILMS R" gene complement(1715453..1716178) /locus_tag="SKA53_08756" CDS complement(1715453..1716178) /locus_tag="SKA53_08756" /note="COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /codon_start=1 /transl_table=11 /product="transcriptional activator protein FnrL" /db_xref="CDD:10533" /translation="MTFSVPNMKSCTDCPIRYNAVCSKCEPDEIEILEQIKYYRSFAA GQTVFFAGDLLEFVGSIVSGVASLTRTLPDGRVQMVGLLLPADFMGRPNRETIDTDIV AETDLMLCCFRRKPFEKLIEQTPHVGQRLLEMTLDELDAAREWMLVLGRKTAREKIAS LLYMIATRMVKLTPGAPEKISFILPITRETMANYLGLTIETVSRQMTALKKDGIIAFD DRRDIKVPDIDVLKAETGEDVYS" gene complement(1716292..1717173) /locus_tag="SKA53_08761" CDS complement(1716292..1717173) /locus_tag="SKA53_08761" /note="COG1560 Lauroyl/myristoyl acyltransferase" /codon_start=1 /transl_table=11 /product="acyltransferase, HtrB family" /db_xref="CDD:11273" /translation="MMRRPLKYAWNQFRYVPLLSVLTWSRARRFDKRSRALGSAIGFV MRWFPPARWRFDRQVLRVFPDMDRKARAKLGQAMGRAMGQTLFEIYHCAEFQSRRDKF HAEGPGLEALVAARDAGKGALIVSGHFGQWEAVRAVLKARGMETGAIYRRQPNPHYQR RLRAGIEAGGMPILETGRTGTKALIRHLRTGGFMAILLDEKQGDGVALPFLDHPALTS LAAAELALKYDLPMVPAYGLRRADGESFDVIFEAPIPHSDPVTMTQAFNDSLSARIRA RPDQWYWMLRRWDKPRA" gene complement(1717273..1718295) /locus_tag="SKA53_08766" CDS complement(1717273..1718295) /locus_tag="SKA53_08766" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11588" /translation="MTHRFPIKEIARQAGLGPATIDRVLNNRANVSPQTRNRVATALR ELKAQEAQLATRGRSVILDVIAEAPLRFCREIRIAAQSAASAMPGVAVRLRFQLQETM TEAEILAALARIAKGGSNGICLKARDTPLLRAAIADLASARIPVFTLVTDLPGSARHG YFGLDNAEAGRTAAHLLAQSLPDDRATILTSRSQDAFRGETDRFTAFRDLITALKPAV QIIDASGGAGMTASTSAQLDKILTSRVRIDGVYSMGGGNAAILRTVAAHGQQPRVFVA HDLDRENTQLLRRGAIGFVLHHDLGRDMATLFAAAVGGNKTANQTASASSDLQIITPY NLPRFA" gene 1718385..1719557 /locus_tag="SKA53_08771" CDS 1718385..1719557 /locus_tag="SKA53_08771" /note="COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14406" /translation="MTLDTTPQATGFYHEAACDLADFAALTARTVDMSTIPNATAAPK NIPVYDMAALAGHLDNPQARNVLMVEWAAILQSGAGVFVLKQACTDHAAIDAATVAYM EIIATERAQGGAAADHFAAAGSNDRIWNSLQKLAITAPDVFIRYFATPAIDAACEAWL GPHYQMTAQINLVHPGGQAQQAHRDYHLGFQTADISATYPAHVHDLSPLMTLQGGIAH CDMSIESGPTKLLPFSQLYRPGYAAWRRDDFRAHFETHCVQLPLDKGDAVFFNPALFH AAGSNSSTDIHRMVNLLQVSSAFGRAMESVDRGAMCRAVFPALCTTDLPPAARDAVLN ATAEGYSFPTNLDRDPPVGGLAPRTQKNILRDAVLQGWTPQALDEALTALVERQIP" gene 1719609..1719803 /locus_tag="SKA53_08776" CDS 1719609..1719803 /locus_tag="SKA53_08776" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLIDPHHPFYRPAWRRYLIVAAPFVWAGVEWSSGNTTWAFLFA AIGGYLAWHLVLNWRPDSKD" gene complement(1719800..1720795) /locus_tag="SKA53_08781" CDS complement(1719800..1720795) /locus_tag="SKA53_08781" /note="COG0673 Predicted dehydrogenases and related proteins" /codon_start=1 /transl_table=11 /product="IdhA, myo-inositol 2-dehydrogenase" /db_xref="CDD:10542" /translation="MLKIGILGCGRIGQVHARSIKALDGAEVVAVADALPAAAQALAQ ATGAQVRDVAAILNADDIDAVVIGTPTDTHFDLIQRAAKGGKAIFCEKPVDMSVDNIR TCIDIVGQAGVTFLTGFNRRFDPNFAALRARIKAGDIGAVELVCITSRDPAPPPVSYI ARSGGLFRDMMIHDFDMARFLMGEDFVRLHAMGSALVDPAIGEAGDVDTAAVILTTAS GRICQISNSRRASYGYDQRIEVHGALGMLRAENQLESTVEIATKAGFRRDPAQHFFLE RYEAAYLAEMRAFIAAATGGTPADPGIVDGLQAQILADAATLSRETGQPVDLSAA" gene complement(1720797..1721636) /locus_tag="SKA53_08786" CDS complement(1720797..1721636) /locus_tag="SKA53_08786" /note="COG0191 Fructose/tagatose bisphosphate aldolase" /codon_start=1 /transl_table=11 /product="fructose-1,6-bisphosphate aldolase, class II" /db_xref="CDD:28009" /translation="MTLKTLAEVLQPALRDNYAVPGLVCLGWEDMRAYVMAAQEERAP VILQAGPSCRAHTPLPVLGAMMRHLATSVDVPVVVHLDHGYTFEECRAALDAGFTSLM YDGSRKPLAQNIDETARIAELAHAAGISCEGEIGFVGYSGGENSAGTDPAEAAIFARD SGVDAMAISVGNVHLQTDHEGGLDEDRIRAIETLTDVPLVIHGGSGVPYAQRLALATG SRIAKFNIGTELRMAFGAALRDAVNADPARFDRVSILKETHDPVMSAARAVIRGLGAS GRA" gene complement(1721633..1722472) /locus_tag="SKA53_08791" CDS complement(1721633..1722472) /locus_tag="SKA53_08791" /note="COG3718 Uncharacterized enzyme involved in inositol metabolism" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13038" /translation="MHIAPFDNANQPIVDINDPHVPLVYFNIVRLAAGASFPYRVAGY ETCIVPATGTVTVETAGQTFAQIGNRGADVWDGEPEGVYIPTDTTAQITALTDCEVFI AGAQFSETLTPFAVRAADIDFVQYGSDDTKTHRKIKHILGAAHHDRVGRLLVSELYTV GAGGWSGFPSHKHDTDRLPDETRHDECYNFRFKPDYGSGLQMLQRIDNEPGDAYHIMN RSTVLIDKGYHPCCVLPGYEMYYFTILGGQSQRSLKQYFQPTHAAQLHTIPGIMDMVA KFK" gene complement(1722485..1723453) /locus_tag="SKA53_08796" CDS complement(1722485..1723453) /locus_tag="SKA53_08796" /note="COG0524 Sugar kinases, ribokinase family" /codon_start=1 /transl_table=11 /product="hypothetical pfkB family carbohydrate kinase" /db_xref="CDD:28241" /translation="MKLDGNRFVIIGRAGMDFYPDPPGTKTEAATQFFACLGGSSANI GVAICKLGGQVDLVTCVSDDAIGRFALNQLDHYGIGRAHVRSVGGEARNSLAVVETRI EDHQSVIYRNGAADFEMTDSDVSGVDYTAYDALITTGTVFAAEPSRSATFLAFELAKA AGLPLILDIDYRPYSWASADEAAEVYSRAGAMCDVIVGNDVEFGFMAGDYDRGLDKAR ELVARGASLAVYKMGEKGAITITPQGEVMTGIYSTDALKPTGAGDSFLGGFVAGLADG LAVRDAVLQGSAAAAIVVSRVGCAPAMPTRADLDSFLRTNVAPTAA" gene complement(1723455..1725326) /locus_tag="SKA53_08801" CDS complement(1723455..1725326) /locus_tag="SKA53_08801" /note="COG3962 Acetolactate synthase" /codon_start=1 /transl_table=11 /product="hypothetical acetolactate synthase, iolD" /db_xref="CDD:13268" /translation="MTTTGATIHLTTAQAIVRYLVNQFIEIDGVEIRICGGGFGIFGH GNVPCLGEALYPVRDVLPLYRGQNEQSMGFAAAAYAKYHLRRRFMFCTASAGPGTANL LTAAALAHANRLPMLMLCGDTFLTRLPDPVLQQLEHFGNPTIGVNDAFKAVSRYWDRI THPAQIIQSLPAALATMLDPADCGPAFLALPQDVQGWTYDYPASFFMRRVHRIRSQMP DARELADAAALLAGAKRPMIIAGGGVQYGGAVAELTAFAESHGIPVVETIAGRANLLA DHPLNIGPIGVTGSDSANTIAQQADVILAVGTRLQDFTTGSWTAFAKDAQIIGLNVGR HDAMKHLSLPVVGDAKVALPALGAALGAYKTPADWTRQAQDHRKTWDTYVAGNVAHGN RPNSYAQAIGVVNALCDPRDRVVTAAGGLPAEVTANWRTLDIGTVDVEFGFSCMGYEI AGGWGARIAQAEAEPDKDTIVLVGDGSYLLMNSDIYSSVLTQKKLIVLVLDNGGFAVI NKLQNNTGQDSFNNLIADCPTIPDPFAVDFEAHARAMGADAVTVANPAALGEAFLRAK ASDKTCVIVMQVDPYDGWTTQGHAWWEVGTPQVSDSATVRAKHAETEAGRDRQRQGV" gene 1725437..1726552 /locus_tag="SKA53_08806" CDS 1725437..1726552 /locus_tag="SKA53_08806" /note="COG0673 Predicted dehydrogenases and related proteins" /codon_start=1 /transl_table=11 /product="probable oxidoreductase" /db_xref="CDD:10542" /translation="MTQIGIGLVGGGYMGKAHAVAMSAVGAVFNTALRPRLAVVTGST PESSERYRAAFGFAHAADDWRALVAHPEVEAVIIASPQTTHRAIAEAAFAAGKPVFCE KPLGASLEDAQAMVAAAAASGLPNMVGFNYVRTPATQFARQLLADGAIGDVTWFRGEH TEDFLADPAMQANWRCFGRPNGCMGDLAPHMINCAVALLGDIAELSAKVETIHPTRPG PDGPVSVDNDDHGQMMVRFASGVMGHLYFSRAATGRKMGYAYEIHGTKGAIRFDQEDQ NAVWLYRATGPEATRGFTKILTGPSHPDYLPFCQGPGHGTGYQDQIIIEARDFLQAIQ SGQPVWPTFRDGLAVAQVIETAFASAADGRWHSVPSN" gene 1726521..1727456 /locus_tag="SKA53_08811" CDS 1726521..1727456 /locus_tag="SKA53_08811" /note="COG1082 Sugar phosphate isomerases/epimerases" /codon_start=1 /transl_table=11 /product="putative myo-inositol catabolism protein" /db_xref="CDD:10804" /translation="MAAGILSHPTEKVPFMTIRIGNAPCSWGVEFPDDPRNPPWRNVL RECAQAGYKGIELGPVGFMPEDPALLADALAENELELIGGVVFRAFHDPAQWDNVLDG AVRTCKALVAHGAQHLVLIDSISPRRAPTAGRAADAEQMDAAEWAAFRDRIATVARMG AEEYGLTVGIHAHAAGFIDFEPELERLLDDVPEDILKICFDTGHHSYAGFDPVAFMRR HIDRISYMHFKDINPAVKATAIANSTGFYEACGQGIFCNLGQGDVDFPAVRQILLDHG FSGWCTVEQDCDPTLDVSPVTDARANREYLQSIGF" gene 1727463..1728596 /locus_tag="SKA53_08816" CDS 1727463..1728596 /locus_tag="SKA53_08816" /note="COG0673 Predicted dehydrogenases and related proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10542" /translation="MMKLNWGMIGGGEGSQIGPAHRLGAQADGNFNLAAAALDADPAK GRAYAQSLGVPADRAYGDWREMLAGETAREDRIDLVTVATPNATHYEITKAFLEAGFH VLCEKPMTMTVEQGEDIVRTARAAGRICAVNYCYSAYPMVRQMRAMVRAGEIGKVRLV VTNFSHGHHGDATDADNPRVRWRYDPAMAGVSGQFADCGIHALHMASFIVGDEVEKVS ADFASTIASRVLEDDAMVNFRMASGTVGRLWTSSVAIGRQHGFDIQIFGETGGMRWAS EQPNQVYYTPVGGRTQIMEKGESGLCSDAARLSRVAIAHPEGFPLAVANIYVDLAAAI RGGSNDGLPLAEDGLRSMAAVYASVASAKADGAWTDARPPMFR" gene complement(1728593..1729591) /locus_tag="SKA53_08821" CDS complement(1728593..1729591) /locus_tag="SKA53_08821" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /db_xref="CDD:11322" /translation="MTVTLKDVALRAGVSRSAVSRTFTEGASVSAKTRAKVEKAAIEL KYSPNALASSLTTGRTKMIGLVSNNFHNPLFLEVFDLFTRGLQERGLRPLLVNLSAET DPANSVRMLRQYSVDGVIVASSTLPPSFAEAFRDVGIPVVHSFGRYTSSPQVHVVGID NIACGRMAAQRLIATGSRRVAFLGGPENATSTQDRERGFLEAMASHTDIAVSVSYASA YSFDAGRTEMARLLESSPAEAYFCGDDVLSIGALSAIADAGLRVPDDIGVIGLNDMAM ARWENINLTTIRQPIAEIIGASVDLVVGTIDQPERHPETRLFPCRIVERGTLRPFP" gene 1729778..1730713 /locus_tag="SKA53_08826" CDS 1729778..1730713 /locus_tag="SKA53_08826" /note="COG1879 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, periplasmic sugar-binding protein" /db_xref="CDD:11588" /translation="MKTVTIAAVAATAMISANAAMAEGERYVLVSHAPDSDSWWNTIK NGLALGGEQMGVTVEYRNPPTGDLADMARIIEQAAASAPDGIITTLADFDVLSGPIRN AVDAGIEVIIINSGTPEQAREVGALMYVGQPEYDAGFAAGQRAAGDGVASFLCVNHYI AQPASTERCQGFADGLGIDLGNQMIDSGQDPSEIQNRVMAYLNANPDTDAVLTLGPTS ADPTILALDQMGLAGDIYFGTFDLGGDIVQAISDGVIEWGIDQQPFLQAYLPVVVLTN YHRFGVLPGNNINSGPGFVTADALGLVADLAGEYR" gene 1730786..1731901 /locus_tag="SKA53_08831" CDS 1730786..1731901 /locus_tag="SKA53_08831" /note="COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /codon_start=1 /transl_table=11 /product="permease protein of sugar ABC transporter" /db_xref="CDD:10890" /translation="MSKTDATVDERIKETSKLRKALIRPELGAIVGTIAVFAFFIIFA GNSGMFNAQGVLNWSTVSAQFMIIAVGACMLMIAGEFDLSVGSMIGFAGMSIAIISVT LGWPIWVAILLTFALCIAIGALNGIIVVRTGLPSFIVTLAFLFILRGFTIFFPQLIER RTIIGGISEAAEGDWLAPLFGGKVGGGFFIWLGDLGVIEVFSRGTRAGQPVVDGIPML IIWALGLVAIAHIILTRTQFGNWIFAAGGDAQAARYVGVPVNRVKIQMFMFTAFCACV FATCQVIEFGSAGADRGLLKEFEAIIAVVIGGALLTGGYGSVIGAALGALIFGVVQQG LFFAGVESSLFRVFLGVILLFAVILNTYIRRIITGER" gene 1731903..1732685 /locus_tag="SKA53_08836" CDS 1731903..1732685 /locus_tag="SKA53_08836" /note="COG1129 ABC-type sugar transport system, ATPase component" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, ATP-binding protein" /db_xref="CDD:10850" /translation="MTTEPIIEMRNIEKHFGPVIALNGVSFDIRPGECHCLLGDNGAG KSTFIKTMAGVHKPTGGEILFGGQAMHFDSPRDAMEAGIATVYQDLAMIPLMSVTRNF WMGREPVRKVGPFKFLDFKTANDVTMSEMRKMGINLRSPQQAVGTLSGGERQTVAIAR AVHFGAKVLILDEPTSALGVRQTANVLSTIDRVRKTGIGIVFITHNVRHAMAVGDRFT VLNRGKTLGTAARGEITPEALQDLMAGGQEMAALEGSLGGTV" gene 1732685..1733479 /locus_tag="SKA53_08841" CDS 1732685..1733479 /locus_tag="SKA53_08841" /note="COG3718 Uncharacterized enzyme involved in inositol metabolism" /codon_start=1 /transl_table=11 /product="Uncharacterized enzyme involved in inositol metabolism, IolB" /db_xref="CDD:13038" /translation="MANLLRKPLARDGLVHAVTPENAGWRYVGFELHRLASGAVASGL TQDREAILVMVEGRAQVQAAGQDWGVLGDRMDVFEKTAPHCLYIPPAQDWQVTATTDC TLAICCAPAKGGYPARRLGPDGITLTQRGDGSNTRWINNIAMEDADVAESLLITEVFT PAGNWSSYPSHRHDEDDYPRITYLEESYYHRLNPPQGFGIQRVYTDDGTLDETMTVKN HDVVLVPRGHHPCAAPHGYDMYYLNVMAGPLRKWRFVADPDHAWLM" gene complement(1733498..1735807) /locus_tag="SKA53_08846" CDS complement(1733498..1735807) /locus_tag="SKA53_08846" /note="COG0209 Ribonucleotide reductase, alpha subunit" /codon_start=1 /transl_table=11 /product="ribonucleoside-diphosphate reductase, putative" /db_xref="CDD:28497" /translation="MSHFAAPIAEQIWDMKYRFKQADGTPIDISVEDTWHRIAKSLAA VEADPQAWEPKFYDALADFKYLPAGRITAGAGTARSVTLFNCFVMGTVPDSMGGIFDM LKEAALTMQQGGGIGYDFSTIRPKGASVLGVAADASGPLSFMDVWDAMCRTIMSAGSR RGAMMAVMRCDHPDIEAFITAKSDAARLRMFNMSVLITDPFMAAVKAGGDWDLLFDGQ VYKTLKARDLWDTIMQSTYDYAEPGVIFIDRINQMNNLNYCETIAATNPCGEQPLPPY GACLLGSINMARLVSDPFSDSAKLDANALTDLVATAVRMMDNVVDASRFPLPAQQHEA MNKRRIGLGVTGLADALLMVGLRYGSEEAAAQTDAWMHAIARAAYLASVDLAKEKGAF PLFDADKYLASGAMQQMDDDVREAIRTHGIRNALLTSIAPTGTISLYAGNVSSGIEPV FAYAYTRKVLQKDGTKTEEEVVDYAVQMWRDLKGDAPLPDYFVNAQTLAPLDHVRMQA AAQKWIDSSISKTINCPEDISFDAFKEVYMAAWDQGCKGCTTYRPNDVTGSVLSVSEE KPQLLISENTPAGGDPEGSHGTTPGGEVIYMSEPLDRPQELEGATYKLKWPDSEHAIY ITINDLVVAGHRRPFEIFINSKNMEHFAWTVALTRMISAVFRRGGDVTFVVEELKAVF DPRGGAWMQGKYVPSILAAIGGVIERHMVAIGFLAGEGLGLKADPTADVVTLQGGKRG KACSSCGSYDLRMIEGCMTCASCGYSKCG" gene 1735992..1736423 /locus_tag="SKA53_08851" CDS 1735992..1736423 /locus_tag="SKA53_08851" /note="COG0459 Chaperonin GroEL (HSP60 family)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTKIVHLLKLSVGTDDVADLAAWQADRRAQTEDGLPRHITRMWP KREDEILNGGSIYWVIKGVILCRQPIVRLDEYIGGDGIRRCAITCKPGLIRVAATPKR AFQGWRYLPVTDAPPDLPAGRQHEEALPPELSKALAAIGVR" gene 1736498..1738039 /locus_tag="SKA53_08856" CDS 1736498..1738039 /locus_tag="SKA53_08856" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="4-coumarate:CoA ligase" /db_xref="CDD:10192" /translation="MSIYHTSFADVPLRAQSITERVFDGLVMRPDDVVLIDGPTGRSL TAADFMDQVKRLAGGLSAAGLGHGKVVALMAPNMPEYCIIFHAVAWAGGTITTLNPTY TATEIRHQLADSRADVLFTIPDFLATAQAGAGDLDVIAIGTDAYAALLGDPLPAQVPV DIVAHTVVLPYSSGTTGLPKGVMLSHRNLVVNVDQIIAAADFRAGEVAAGFLPFFHIY GMTVLMNVHLAGGGAVVTMPRFDLPLFLQISQDHKARRMWIVPPVALALAKHPLVDQY DLSSIEQVFSGAAPMGAELSNAVGKRLDCISLQGYGMTELSPVSHVTPATAAVAGASG LALPNTSCRIVDIDTGADLPAGEDGELWIKGPQVMQGYLNNPTATAATITDDGWLRTG DIARIDDQGYMFIVDRLKELIKYKGFQVAPAELEAALVALEGITDAAVIGLPDAEAGE LPIAFVVAGNGAPDADAIMAHLGRTLAHYKQLHQIHIVPEIPKSASGKILRRMLRDRI AAQAE" gene 1738114..>1738538 /locus_tag="SKA53_08861" CDS 1738114..>1738538 /locus_tag="SKA53_08861" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MAAIEESRPMHERRIPEWLRHAPAPGVRGFATLAGTEAVARGIL ISVFPLAMYNALQDAQLISEAYFLVGILSLAVGLMVPFTTRYLPRRWVYVIGASFFVT GSLFAATGDPLAVVFGLGLNTMSTVITFVCFNAYVMDYIS" gene <1738639..1739433 /locus_tag="SKA53_08874" CDS <1738639..1739433 /locus_tag="SKA53_08874" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="SRLFYSAAGWTIGPALGVFLYSWWSPAPFFIAACAAFSMLSLFS WMRLGNGKLITKATRPPANPLAYLPRFAGQPRLIAGWIFAVVRSAGWWVYIVYLPIYA IENGLGDRIAGIVLSMSNAALFITPLMLRWMQKHSIRYAVRTGFVTAGCLFSIAGLAA GWPWVTVLALVGGSFFLILLDVSGGLPFLLAVKPSERTEMAAVYASFRDVSGILTPGT AWLVLLFAPVSGVFVASGASLLAAWALSSKLHPRLGRARITIAPAE" gene complement(1739434..1740123) /gene="hisG" /locus_tag="SKA53_08879" CDS complement(1739434..1740123) /gene="hisG" /locus_tag="SKA53_08879" /EC_number="2.4.2.17" /note="COG0040 ATP phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase" /db_xref="CDD:9915" /translation="MLKLGVPSKGRLMEKTFDWFGARGVTLRKSGSEREYAGAVDGIE GLELVLLSAGEIPRELALGNIHLGVTGSDLVREKLVNWQGRVREMALMGFGGADLVIA VPQAWVDVDTLDDLDAAAAAFRAQHGFRLRIATKYHRLVREFLRDNGVADYQLIDSQG ATEGTVKNETAEAIADITSTGETLRANGLKILSDGLIHASQATLFRGSRANWTAQQRK ILTSLERALEL" gene complement(1740117..1741196) /locus_tag="SKA53_08884" CDS complement(1740117..1741196) /locus_tag="SKA53_08884" /note="COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis" /codon_start=1 /transl_table=11 /product="ATP phosphoribosyltransferase regulatory subunit" /db_xref="CDD:13025" /translation="MPTSPATLTEARRLRDHFAAQGAVVVKADVLQPADLLLDLYGDD IRARAYLTADPLRGEMVLRPDFTVPVVQMHMETYADPARYTYSGKVFRKQETDETRAN EYVQVGYEVFDGQNPAAADAEVFAVIAAGLAGLPLRAATGDIGVLMAAVRGLRTTEDR KAALLRHIWRPVRFRALLRRYGAGDVPPLRAALLAADDPFAAAGPEIGLRSQAEVAAR IAALRADAAAAPLSSDETALIDAILGLRATSTDALSVLRDIAVDMPSIGSAVRRMEAR LHAMAARGIDVDTLDFEGSYGRTSLEYYDGFVFGFYASERPELPPIATGGRYDALTAR LGQGRAVPAVGGVIRPDLALEVGRC" gene complement(1741196..1742674) /gene="hisS" /locus_tag="SKA53_08889" CDS complement(1741196..1742674) /gene="hisS" /locus_tag="SKA53_08889" /EC_number="6.1.1.21" /note="COG0124 Histidyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="histidyl-tRNA synthetase" /db_xref="CDD:9999" /translation="MASDKKQPRPKAVTPKGFQDYFGADVTERAAMLAKIAAVYDRYG FDALETSAVETVEALGKFLPDVDRPNEGVFAWQEDADWLALRYDLTAPLARVAAQYRN DLPSPYRRYAMGPVWRNEKPGPGRFRQFYQCDADTVGAASVAADAEICAMLADCLEEV GIARGDYVIRVNNRKVLNGVLEVAGLSGDDTEAERGIVLRAIDKLDRLGVAGVRALLG EGRKDESGDFTKGAGLSQAQADVVIGFMEAKRDTGAATVARLAELVAGSPIGVAGVAE LDEIAGLLSAQGYGPDRIVIDPSVVRGLGYYTGPVFEAELTFEVTDEKGRPRNFGSVA GGGRYDDLVKRFTGQEVPATGVSIGVDRLLAALRATGRITSASAGPVIVTVMDRAHMA DYQSMVAELRKAGIRSEVYLGNPKNFGNQLKYADKRASPVAIIAGGDEFAKGVVQIKD LILGAQIAKNATLEEWKDRPSQYEVSREQMVARVRAILDGQG" gene 1742679..1743041 /locus_tag="SKA53_08894" CDS 1742679..1743041 /locus_tag="SKA53_08894" /note="COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins" /codon_start=1 /transl_table=11 /product="SlyX protein, putative" /db_xref="CDD:12250" /translation="MSFCFGAVYPASMTGAMQCKAAPKALSLLFSKNTQSRTAPQALR ARKGGVSDTMNTIDPLEEKIAHLTRSVDDLSDIVARQDKELALLTRRVALLIEREMSR DQDAGNNVTLTDQRPPHW" gene complement(1743060..1746626) /locus_tag="SKA53_08899" CDS complement(1743060..1746626) /locus_tag="SKA53_08899" /note="COG0587 DNA polymerase III, alpha subunit" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit alpha" /db_xref="CDD:10457" /translation="MTDSPRFIHLRTHTEYSLLEGAVPVKSLAPLAAGMGMPAVAVTD TNNMFCALEFSEYAVKAGVQPIIGCQLDLAYATPDPGKRPEPPAPIVLLAQNEAGYLN LMKLNSCAYLDAAGELPQVTVDELAQYGTGLICLTGGPDGPIGRLLRHGQQAKADLLL DQLAAIYPQRLYVELQRHPVDGGLPEAERLSERGHIEMAYAKGLPLVATNDVYFPKSA FYEAHDALICIADGAYVDQQEPRRRLTPQHYFKSPREMATLFADLPEALENTIEIAQR CAFKAYKRAPILPKFADDEVAELRRQAQEGLRARLAVIPHAASIEDYEKRLDFELGII EGMGFPGYFLIVADFIKWAKDNGIPVGPGRGSGAGSLVAYALLITDLDPLRYSLLFER FLNPERVSMPDFDIDFCMDRREEVIRYVQDKYGRDRVGQIITFGALLSKAAVRDVGRV LQMPYGQVDRLSKMIPVEGVKPVSIEKALADEPRLREEAKNEEVVQRLLTYAQQVEGL LRNASTHAAGVVIGDRPLDELVPLYQDPRSDMPATQFNMKWVEQAGLVKFDFLGLKTL TVIHNAVELIRKAGRSLNVTADGDVLYQPPVGFEYDIGAIPLDDAKSYALYASAKTIA VFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPMENIPTYCEVKNGIKELESIHPS IDHILAETQGIIVYQEQVMEIAQVMAGYSLGGADLLRRAMGKKIAEEMAKERPKFEAG AKANGVEPKKAREVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANHPVEFMAGVMN CDIHLTDKLGVYFQEVKKGLGIDYIPPCVNRSGATFEVQDGKLVYALGALKNVGVEAM KLIVAGREGHPGLDPGPHSAGGPGSASGATPKPFVNLFDFARRCDLKRIGKRSLEMLA RAGAFDVLDRNRRRVMASLDALTAYSAAIHDQKSSNQVSLFGDAGEDLPEPRLAFGDD WLPAERLAEEFKAIGFYLSGHPLDDYMGALKRKQVLTLDEVIARAEKGAALVKMAGTV SGRQERKSARGNRFAFVQLSDPTGQYEVTMFSDTLEVARTYLETGSQIVLQCEATMEG DQLKLLGRSVSPIDSVVADAGSAGLRVFIDSPSAIDTIASILASAARDGVRAARGPVY ICLTNADLPGEVELDLGEPFPVNPQIKGALRSLGGVIEVEDA" gene 1746716..1747012 /locus_tag="SKA53_08904" CDS 1746716..1747012 /locus_tag="SKA53_08904" /note="COG0640 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulatory protein" /db_xref="CDD:373" /translation="MTAKLDKFFGAMSDPTRRAVLERLASGPASVGELHRPHQMALPT FMRHLKVLEDSGVLRSVKKGRVRTCQLETAPLIEVQGWLAWQRTIWENRDAGQP" gene 1747179..1748534 /locus_tag="SKA53_08909" CDS 1747179..1748534 /locus_tag="SKA53_08909" /note="COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase, A subunit" /db_xref="CDD:13774" /translation="MEITFLLNGETMRITAQPTTTLLDWLRNDQGLCGTKEGCNEGDC GACTVMVTDDSGAKSLNACILLLPQLHGKAVRTVEGIAAPDGALHPVQQAMIDHHGSQ CGFCTPGFIAAMATAHLAGRTDHDDVLAGNLCRCTGYAPIIRAAKAAEALPSPDWVKD IPPAVAPALYAPETLDELAAYYAAHPDATIVAGATDVGLWVTKQLRDLQIPVFLHRCV DLQHITVADDAIDIGAGVTMAAVLGKMGEYHPSYAELIRRYGSDQVRNAATIGGNIAN GSPIGDNPPALIALGATLHLRHGEDTRQMPVEDFFLDYGKQDRKPGELVTGVTLPRVS PDLRCYKISKRFDQDISAVCGCFNISVADGVVTTARIAFGGMAGVPKRAAAVEAALIG QPWTQESVAAAARAFRDDFTPLSDMRASADYRLQVAQNLLLRYFAQSTGQAANVLEVS A" gene 1748531..1750903 /locus_tag="SKA53_08914" CDS 1748531..1750903 /locus_tag="SKA53_08914" /note="COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase, B subunit" /db_xref="CDD:13775" /translation="MSVATSLPHDAAHLHVTGQARYIDDIPTPAGTLHLAFGLSDVAK GAITAMDLDAVRAAPGVVAVLTADDLPFANDVSPSVHDEPLLATGEVHYLGQPLFVVI ADSHLAARKAARLGKVSITPETPILTIDQALAANSRFEDGPRIWTKGDFDAALAAAPR RITGQIDMGGQEHFYLEGQAALALPQEGGDMVVQSSTQHPTEIQHKVADALGLPMHAV RCEVRRMGGGFGGKESQGNALAVACAVAARLTGRPCKMRYDRDDDMMITGKRHDFRIT YDVGVDSDGRLLGVDFVQMTRCGWAMDLSLPVADRAMLHADNAYHLPAARITSHRLKT NTQSATAFRGFGGPQGVLGIERVMDHVAAELGLDPVVVRQRNFYAPMAEDEAAPGAHG GLSAPHGAAHLPPEDISARTMEAQTTPYHMPVTDFILHGLAQRLLETSAYHARRAAIA RWNEGQPVLRRGIAFSPVKFGISFTLSHLNQAGALVHVYQDGSVHMNHGGTEMGQGLF QKVAQVAASRFGIDVAAVKITATDTGKVPNTSATAASSGSDLNGMAVANACDTIRDRI AACLAQVHQCHVADVHFADGHVHAGGDVMTFAKAAQTAYFQRVSLSATGFYKTPGLSW DRIRGEGKPFFYFAQGAAVTEVVIDTLTGENRILRTDLLHDAGASLNPALDIGQVEGA FVQGAGWLTTEELVWDAKGRLRTHAPATYKIPACSDRPEIFNVALWDQPNPAQTIYRS KAVGEPPFMLGISAFLALSAAVQACGPSYPDLQAPATAEEVLRAVHRARG" gene 1750900..1751637 /locus_tag="SKA53_08919" CDS 1750900..1751637 /locus_tag="SKA53_08919" /note="COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family" /codon_start=1 /transl_table=11 /product="xanthine dehydrogenase chaperone/MPT insertion protein" /db_xref="CDD:11683" /translation="MTGIRITVAQTAGSAPRETGAQMMVWADRIEGTIGGGALEWDAM AEARRMLVDGRTQHRATIPLGPALGQCCGGSVTLVWGVAEALEDPPRRALWIYGAGHV GRAIVHVMQPLPDFAITWVDVAADRFPQTDVTTLVAVDPAQAVRHAPDQTDHLILTYS HALDLALCHAILSRPFASVGLIGSATKWARFRKRLGDLGHSSAQIDRIACPIGDPALG KHPAALALGVATAMIRTETRQSRERQA" gene 1751634..1753157 /locus_tag="SKA53_08924" CDS 1751634..1753157 /locus_tag="SKA53_08924" /note="COG3845 ABC-type uncharacterized transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, ATP-binding protein" /db_xref="CDD:13161" /translation="MTTPLLRLRGLTKAYPGVVANQDVSFDIQPGEIHALLGENGAGK STLVKTIYGLVKPDAGQMELQGAVFAPAEPRAARMAGVAMVFQHFSLFDAMNVAENIA LGMENPPPQREIAARVRLVSDQYGLPLDPLRIVGELSAGERQRVEIVRCLLQDPKLLI MDEPTSVLTPQEVAILFETLRRLRAAGAAILYISHKLEEIRALCDAATVLRLGRVVGS CDPRTTSAREMAELMVGSSLHVPHKAARPEGEVILTLQGLSAKAPHRFGTALRDIDLT VRRGEILGIGGVAGNGQDELVAALSGEIRTRRDMVLFDGKSIGHLAPNARRRLGLLAA PEERMGHAAAPDMSLTENALLTAAARQDLTARGFVRWGKAREFAANVIAAFDVRTPGA GNTARSLSGGNLQKFVIGREIMQDPALLVVNQPTWGVDASAAAAIRQALLDLAAKGAA VICISQDLDELMEISDRFAALNAGRLSAPRPAQGLSVEQIGLMLGGAHDMEVAHVDA" gene 1753209..1754288 /locus_tag="SKA53_08929" CDS 1753209..1754288 /locus_tag="SKA53_08929" /note="COG4603 ABC-type uncharacterized transport system, permease component" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, permease protein" /db_xref="CDD:13759" /translation="MIRLEKRTAPSRFWTYAAPLLAVVLTMVCGALLFAALGKDPFET IRTIFWDPLFSEFSWYYRPQLLIKAAPLVLIAIGLSFGFRAGVWNIGAEGQYILGAIC GAAVGLAFYPTESPFIFPLMVMAGALGGWAWAMIPGFLRVRFGTNEILVSLMLVYVAQ SLLASMALGALRNPDASGFPGSRNLARYPSATSWINESAGLHWGVVFALIAVIFAYIT LSRHIFGFHVRLSGQSPRAARFAGVNPGLLVLICMAISGALAGLAGLFEVAGPSGLIS IDFNAGYGFTAIIVAFLGRLHPVGILLAAGLMALTYIGGEIAQSNLRLPAAAIQVLQG MLLFFLLAVDVLTHYRIRLTARGVA" gene 1754288..1755202 /locus_tag="SKA53_08934" CDS 1754288..1755202 /locus_tag="SKA53_08934" /note="COG1079 Uncharacterized ABC-type transport system, permease component" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, permease protein" /db_xref="CDD:10802" /translation="MDLSAINPILLLASLMVAATPILLAAIGELVVERAGVLNLGVEG MMITGAVCGFIVTINAGSPLLGFAGAAIGGALLALVFGVLTQVLLSNQVATGLALTLF GLGFAALLGQGYIGIKAPVIPKWPVPVLSDIPVIGPILFNHDPVVYLGIAIIAGVWAF LRYSRAGLILRAVGENHDAAHALGYHVIRVRLLAIMFGGACAGLGGAYLSLVRVPQWT EGLTAGAGWIALAIVVFASWRPWRLLLGAYLFGGVTVLQLNLQAAGMAIPVAYLSMAP YLATILVLVMMRAGRAPGSLAQSFHASR" gene 1755222..1756301 /locus_tag="SKA53_08939" CDS 1755222..1756301 /locus_tag="SKA53_08939" /note="COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein" /codon_start=1 /transl_table=11 /product="bmp family protein" /db_xref="CDD:11455" /translation="MKMKFKKLLAGTGIALALATGAFAQDKTTVGFVYVGPVGDGGWT YEHDKGRQAVEAHFGDAVETVFVESVPEGPDAERVITQMALQGADLIFTTSFGYMDAT INVAERFPDVKFEHATGYKTADNVAIYNARFYEGRAIQGHIAGQMTQSNIVGYIGSYP IPEVIQGINSAFIHAREVNPDVEFRVVWAYTWFDPAKEAEAATVLIEQGADVILQHTD STAPQAAAQAAGNVVTFGQASDMSEFAPFPRVSSIIDDWAPYYVARTQAVIDGTWESS DTWDGIPQGMVSIGEITEAVPAEVKASAEAMIEAIRAGEYHPFTGPLNRQDGSVWLAE GETASDGDLLGMNFYVEGLTGDIPQ" gene complement(1756350..1757915) /locus_tag="SKA53_08944" CDS complement(1756350..1757915) /locus_tag="SKA53_08944" /note="COG1115 Na+/alanine symporter" /codon_start=1 /transl_table=11 /product="sodium:alanine symporter family protein" /db_xref="CDD:10837" /translation="MKCFIMLKLHHIMAALAACLLPGLAAAQEAVSLDERINGIFADY TGWYVGFIFAPFPGTDFSWIALWLVVGAVVFTVYFGAIQFSGFVHSIRLVKGDYSDPN DAGEVSHFQALTTALSGTVGLGNIAGVAVAVSIGGAGATFWMIVAGLFGMATKFTECT LGVKYRNEYPDGSVSGGPMYYMVKGFKERGLPLGGAMAVVFSIFTILGALGGGNMFQA NQAHAQISTVVGDYPGWITGVVLALLTFAVIAGGLKSIARVTEKIVPFMGIFYVLVSL LILLINYDQILWAFGQIIEGAFTGLGVVGGFTGALIQGFRRAAFSNEAGIGSAAIAHA AVRTKEPVTEGYVALLEPFIDTVVICTMTALVIVISGVLAQDSATGLYIWNAELGRIT TAGDVSGVALTSAAYATAFSWFPVLLMVAVVLFAFSTMISWSYYGLKAWTYLFGEGAV KELIFKIIFCLFIVIGAAASLGPVIDFSDAMLFSMAIVNIIALYCLMPIVKRELHSYR RRLRSGEIVKQPK" gene complement(1757912..1758352) /locus_tag="SKA53_08949" CDS complement(1757912..1758352) /locus_tag="SKA53_08949" /note="COG0589 Universal stress protein UspA and related nucleotide-binding proteins" /codon_start=1 /transl_table=11 /product="universal stress protein family protein" /db_xref="CDD:28402" /translation="MEKTTFIVGLDGSETGARALAFAMDRAAAIGDCAIVICYVIEWS PFTFQTAEENRERHKRREAEIAMAHERVLNPALTMTRAEGFDIEGIVRHGDAADILDA LARERGAKQIIVGRIGARGLKSRLFGGVAGRLAATASVPITIIP" gene 1758669..1760324 /locus_tag="SKA53_08954" CDS 1758669..1760324 /locus_tag="SKA53_08954" /note="COG0488 ATPase components of ABC transporters with duplicated ATPase domains" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /db_xref="CDD:10359" /translation="MAAYQYVYFMDGVSKTYPGGKKVFENIRLNFLPGVKIGVVGVNG TGKSTLMRIMAGQDKDFAGEAWSAEGARVGYLPQEPELDPNLTVRENVMLGVAGKKAI LDRYNEVAMNYSEETADEMAQLQDEIDAQNLWDLDAQIDISMEALRCPPDEADVTTLS GGEKRRVALCKLLLEAPDMLLLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFL DAITGWILELDRGSGIPHEGNYSSWLEAKAKRLEREAKDDKSKQRTLERELEWMRQGA KARQAKSKARISAYNDLANQSEREKMGRAQIIIPNGPRLGNKVIEVEGLKKAMGDKLL IEDLTFDLPPGGIVGVIGPNGAGKSTLFSMLTGQTQPDEGSVSYGDTVKLSYVDQSRD ALAPDATVWEEITGGAEIIMLGDAQMNSRAYCSAFNFKGGDQQKKVGLLSGGERNRVH MAKLLKSGGNVLLLDEPTNDLDVETLRALEDALVDFAGCAVVISHDRFFLDRICTHIL AFEGDAHVEWFQGGFTDYEEDKKSRLGADALEPKRMKHKKFVR" gene 1760542..1760748 /locus_tag="SKA53_08959" CDS 1760542..1760748 /locus_tag="SKA53_08959" /note="COG1278 Cold shock proteins" /codon_start=1 /transl_table=11 /product="cold shock protein CspA" /db_xref="CDD:16696" /translation="MANGTVKWFNATKGFGFIAPEGGSKDVFVHISAVERSGLTGLKD DQKVTFDIESGRDGRESAINLALA" gene 1760949..1761191 /locus_tag="SKA53_08964" CDS 1760949..1761191 /locus_tag="SKA53_08964" /note="COG1278 Cold shock proteins" /codon_start=1 /transl_table=11 /product="cold shock family protein" /db_xref="CDD:16696" /translation="MRAEKKRKDKDMASGTVKWFNTTKGYGFIAPEGGSKDVFVHISA VERSGLTGLKDNQKVNFDIEASRDGRESAVNLTLAD" gene complement(1761248..1761925) /locus_tag="SKA53_08969" CDS complement(1761248..1761925) /locus_tag="SKA53_08969" /note="COG2755 Lysophospholipase L1 and related esterases" /codon_start=1 /transl_table=11 /product="Lipolytic enzyme, G-D-S-L family" /db_xref="CDD:28584" /translation="MRKAFGRGVTFAYGAIRGLRNIGGVVLLTMTAGHAQTVTIAALG DSLTAGYGLDQGQGLVPQLEQWLRDQGADVTMINAGVSGDTTAGGLARVGWTLTPQVD AMIVALGGNDYLRGLDPAVSRTNLDGILAAGQQAGVAMLLVGLQVGANYGPAYKRDFE ANYTDLAASYDVPLYHDMFAGMRVTDSDLPAFMQADGIHPSAEGVALIVADIGPAILD LIADVPR" gene 1761924..1762613 /locus_tag="SKA53_08974" CDS 1761924..1762613 /locus_tag="SKA53_08974" /note="COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component" /codon_start=1 /transl_table=11 /product="ABC efflux transporter, ATPase subunit" /db_xref="CDD:13444" /translation="MTDPVLTITDLNLSLDGNAGRVDILHDISLTVAQGETLGLVGPS GSGKSSLLMVMGGLEQATSGRIMALDQDLTAMNEDQLARFRRDNMGVVFQSFHLIPTM TALENVATPLELAGVRDAFARAEAELRAVGLGDRINHYPSQMSGGEQQRVALARASAP RPKILLADEPTGNLDATNGAAIIDLLFDLRDRHGATLIMVTHANELAARCDRVVNLRD GRIDTLAKAAE" gene 1762610..1765126 /locus_tag="SKA53_08979" CDS 1762610..1765126 /locus_tag="SKA53_08979" /note="COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein" /db_xref="CDD:12466" /translation="MTLRIASRFALRELRGGLRGFRVFLACLALGVAAIAAVGTVRAG IEAGLTRDGAALLGGDAEVEFTYRFARAEELAFLNSIADRISETVDFRSMAVVDRDGT TERGLTQIRAVDDPYPLVGAVQLDPAMPLADALADQGGVMERVLADRLGLVAGDTFRL GEATFTLRAILERYPDNASAGFGLGPRTIVLTDALAGSGLIVEGTLFSTQYRLDLPAG ADLAALEQQAEDQFRDAGLRWRDSRRGAGGAAQFVDRIGAFLILVGLSGLAVGGVGVS AAVRAYLAGKTSVIATLKTLGATRSTIFLTYFIQIGVLTLAGVTLGLILGAGLPVVLA PFIEARLPVPAVFTIYAAPLVEAAVYGILAALIFTLWPLAKTEDIRAATLFRDAFSAS RALPRKTYLAVIAGLLTLLVGAAIWFSGTVFLTLWTAGGITGSLLILTLAAALIRWIA RKSRLAARGNTSLRMALGSIGARGGESTSVVLSLGLGLTVLAAVGQIDGNLRSAFADD LPAVAPSYFFVDIQPDQIGGFRERLDQDEAVSRYDTAPMLRGIITQINGRPATEVAAG HWVVRGDRGVTYADAQPAGTEITAGAWWPAGYDGPPQISFAAEEAAEIGLQLGDTMTV NILGRDITGEVTSFRNVSWEDAGIGFVLAMNQSALQGAPHSWISTVYATPESEAAILR DLATAYPNITAIRVRDAIDQVIALVGGLSAATRYGALITLVTGFLVLIGAAAAGERTR TYEAAVLKTLGASRRSILASFALRSALLGLAAGVVALGAGILGGWAVATFVMDTGYTV IWGNALLIIGGGIMASLLAGLGFALRPLAAKPARVLRARE" gene complement(1765129..1766448) /gene="gltX" /locus_tag="SKA53_08984" CDS complement(1765129..1766448) /gene="gltX" /locus_tag="SKA53_08984" /EC_number="6.1.1.17" /note="COG0008 Glutamyl- and glutaminyl-tRNA synthetases" /codon_start=1 /transl_table=11 /product="glutamyl-tRNA synthetase" /db_xref="CDD:27688" /translation="MTTTRFAPSPTGWLHIGNLRAALFNYAIARQNGGTFVLRIDDTD PERSKDEYVEGIKADLTWLGLTWDRMEYQSRRMDRYAEAKQRLIDMGRLYECFETPVE LDLKRKKQLNMGKPPVYDRAALALTEDEKNALRAERGSHWRFKLDQQRIDWPDGIIGD ISIDAASVSDPVLFKNDGQILYTLASVVDDVEMGITDIVRGSDHVTNTATQIQIIQAL GGTVPRFAHHSLLTGPKGEALSKRLGTLSLRDLRAQGIAPQAILSLMARLGSADPVEL RADVTEVVAGFDLSKFGSAPTKFDAEDLGPLTARYLATLSAQDVADVLTSAGVPTDLR VPFWTLVRDNIATLDDVAGWWAMLRDGATPLVDDEDREFIAKALFLLDSPPYTADTWS NWTTLVKDETGRKGKGLFMPLRKAVTGLERGPEMADVMPLLQVKPKL" gene 1766590..1767501 /locus_tag="SKA53_08989" CDS 1766590..1767501 /locus_tag="SKA53_08989" /note="COG0491 Zn-dependent hydrolases, including glyoxylases" /codon_start=1 /transl_table=11 /product="metallo-beta-lactamase family protein" /db_xref="CDD:10362" /translation="MLISRRQALLSGAALPLAAAAPSLVQAQAATASLPTHRDFTLGD FRVTTLLSGSRRVENPQGIFGMNVDADTFAAVSAENFIPTDAAQFFFTPTVLDTGSEV ILFDTGNDAAGITAALAGAGYTTDQITHVVLTHMHGDHIGGLTDESGAETFANAAYVT GQVEYDHWAGAENEGFNAKVRPLAEKMSFLEDGDAVRGGVTAMAAFGHTPGHMGYMLE SGGSQLFLMADTANHYVWSLAYPDWEVRFDMDKQSAAATRRRVMGMAAADRIPLIGYH MPFPGLGFIDTRADDTFHFVPHSYQLI" gene complement(1767502..1769163) /locus_tag="SKA53_08994" CDS complement(1767502..1769163) /locus_tag="SKA53_08994" /EC_number="6.3.5.1" /note="COG0388 Predicted amidohydrolase" /codon_start=1 /transl_table=11 /product="NAD(+) synthase" /db_xref="CDD:28403" /translation="MTRIFRLTMAQLNPTLGDLAGNAALAAQAWAEGKAAGADLVVLP EMFLTGYQTQDLVRKPAFVADAASRLDALARACADGPVLGIGLPMVEDDNLYNCYVYL AGGKITARFRKHFLPNFNVFDEVRLFNSAAISGPVTLAGGPRIGTPICEDAWSPDVCE TMVESGAQILVVPNGSPYFRDKFPIRLQTMIARVVENDVPLVYLNMIGGQDDQMFDGG SFVLNRGGKLAVQLPVFDAAITHVDFQETDQGWVTLDGPKALLPDDLEQDYRAMVEAL RDYLRKTGFGKVLLGLSGGIDSAIVAAIAVDALGADQVRCVMLPSEYTSQASLDDAAA AARALGCRYDTVSIAGPRAAVTEALAPLFGDMPADLTEENIQSRIRGLLLMAQSNKFG EMLLTTGNKSEVAVGYATIYGDMAGGYNPIKDMYKTRVFDICRWRNAHHRDWMQGPAG QVIPPAIIDKPPSAELRPDQRDDDSLPPYDVLDGILAMLVDGDASVADCVAAGYDRAT VKKIEHLVYISEYKRFQAAPGVRLSDRAFWLDRRYPIVNRWRDPS" gene 1769313..1770722 /locus_tag="SKA53_08999" CDS 1769313..1770722 /locus_tag="SKA53_08999" /note="COG4642 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13786" /translation="MKMFGLPQGIATTLLIAGFAASAQAQDIQTKQYDDGGVYEGTFV DGLQDGTGTYRLPNGYEYSGDWVAGEIRGQGIARFPNGSVYEGSFAAGKPEGQGKITF ADGGTFEGDWVDGTITGTGVAEYANGVVYQGEFRNAMHHGIGIMTGPGGYSYEGEWIN GIKEGEGRITYPDGALYQGSLRAGERDGTGTLTMADGLVYTGDWVAGQIEGTGTLTQP NGDIYEGALVAGRREGQGRITYANGDTYEGSFMSDRREGAGTFQGADGYVYTGEWAAG QMSGMGEVTYPDGSVYVGSFANDLADGTGKITYPDGSTYEGTWVAGVISGKGIATYAN GLVYDGEFLNAQNHGQGKMTYADGYIYEGAWAEGQRNGIGRATYADGTIYVGEFVDGQ RSGQGEITLPDGFIYAGAWQDGEISGYGIATYANGDVYEGNFLRGRREGDGTMRYATG QQSTGLWSDGAFVSQTAGE" gene complement(1770734..1772257) /locus_tag="SKA53_09004" CDS complement(1770734..1772257) /locus_tag="SKA53_09004" /note="COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12385" /translation="MRLVLVLGDQLSPNLSALRKCDKANDVVVMAEVADEASYVPHHP KKIAFLFAAMRKFADRLRADGWQVAYTRLDDPDNTGSITGELIRRSSEHKAAGVVYTE PGEWRLIAALGDMPLQSHSLPDDRFIASHADFDAWAEGRKQLRMEYFYRDMRRKTGIL MDGDQPEGGKWNYDHDNRKPAPDSVDYAGPLQFTPDAVVEEVLDLVARRFGNNFGDLR PFWFATDTGQARQHLAHWIKGGLPKFGDYQDAMLNDHKFLYHGIVGLYLNAGLLDPLE VCQAAEAAYRAGHAPLNAVEGFIRQIIGWREYVRGIYFREGPDYVSRNALGHTRQLPA MYWGAPTKMNCIAKAVDQTKTDAYAHHIQRLMVTGNFALLAGIAPAAVHEWYLAVYAD AYEWVEAPNVIGMSLFADGGIIASKPYISSGNYIHKMSDYCGSCAYRVQDKTGADACP FNLLYWHFLDRHRDRFKGNPRMGQMYAVWDKMDPARRHQVLSEAADFLSRMDAGAPV" gene complement(1772254..1772919) /locus_tag="SKA53_09009" CDS complement(1772254..1772919) /locus_tag="SKA53_09009" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25396" /translation="MKNALIIGASGGIGAAVALELERCGVAVTRLSRRADGFDVTDPS SVDRHLGALHGPFDLVFVAVGILAPQGSGPEKALSAIDAQSMAQVLAVNTIGPALVLR HMPRLLAKDGPAVAAILSARVGSIGDNQIGGWHAYRASKAALNQIIRGAAIELGRSHK QAACVALHPGTVETPFTANYAGRHKTMPAPDAAAHLLAVIDGLTPAQTGRFFDYAGAE VPW" gene 1773162..1774718 /locus_tag="SKA53_09014" CDS 1773162..1774718 /locus_tag="SKA53_09014" /EC_number="2.3.3.13" /note="COG0119 Isopropylmalate/homocitrate/citramalate synthases" /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /db_xref="CDD:9994" /translation="MTKDKVLIFDTTLRDGEQSPGATMTHAEKLEIAELLDDMGVDII EAGFPIASEGDFNAVSEIAKRAKRATICGLARANYKDIDRCWEAVKHASSPRIHTFIG TSPLHRAIPNLDMDQMAERIHDTVTHARNLCDNVQWSPMDATRTEWDYLCRVVEIAIK AGASTINIPDTVGYTAPAESADLIKRLIATVPGADSVIFATHCHNDLGMATANSLAAV IGGARQIECTINGLGERAGNTALEEVVMALKIRGDIMPFETGIDTRKIMNISRRVATV SGFAVQFNKAIVGKNAFAHESGIHQDGMLKNAETFEIMRPEDVGLSGTSLPLGKHSGR AALRAKLAELGFDLADNQLNDVFVRFKDLADRKKEVFDDDLMALVYQNDSGEDRIKLK SLRVICGTEGPQQADMVLDIDGTDVKTSATGDGPVDATFNAVKALFPHGARLQLYQVQ AVTEGTDAQATVMVRLDEDGRIATGQSADTDTVVASAKAYINALNRLLVRRAHSQPGY DTKGVSYKDS" gene 1775006..1776043 /locus_tag="SKA53_09019" CDS 1775006..1776043 /locus_tag="SKA53_09019" /note="COG1077 Actin-like ATPase involved in cell morphogenesis" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreB" /db_xref="CDD:26832" /translation="MFGFGGIFSSDMAIDLGTANTLVYVRGKGIVLSEPSVVAYQVKN GVRKVLAVGEDAKLMLGRTPGSIEAIRPMRDGVIADFDTAEEMIKHFIRKVHKRSTFR KPKVIVCVPHGATPVEKRAIRQSVLSAGARRAGLIAEPIAAAIGAGMPITDPTGNMVV DIGGGTTEVAVLSLGDIVYARSVRVGGDRMDEAIINYLRRQHNLLIGESTAERIKTSI GTARMPDDGRGQSMLIRGRDLLNGVPKETEINQAQVAEALAEPVQQICEAVMTALEAT PPDLAADIVDRGVMLTGGGALLGQLDLALREQTGLAISVADESLNCVALGTGRALEYE KQLRHVIDYDS" gene 1776068..1776991 /locus_tag="SKA53_09024" CDS 1776068..1776991 /locus_tag="SKA53_09024" /note="COG1792 Cell shape-determining protein" /codon_start=1 /transl_table=11 /product="Rod shape-determining protein, MreC" /db_xref="CDD:11502" /translation="MARDNSSETYITPIRNLLVGVLVLALLVIFAVWRIDSPRVERLR MAVIDRVVPSFDWVMAPINGTANLLADFQSYQRLAAQNQDLRRELQQMKAWREAALQL EQENAKLLDLNNVRIDPKLTFVTGVVMTDSGSPFRQSVLLNVGARDGIIDGWPTMDGI GLAGRIAGVGRQTSRVLLLTDTSSRIPITILPSGQRAILAGDSTSNPIIEFLEDRAVV RPGDSVVSSGDGGVFPADLLVGQVALGTDNRLRVRLAVDYQRLEFLRVLRAHPHEVIN DPGRLLTPLPEIYGPSALSPAAPATAEAADG" gene 1776984..1777523 /locus_tag="SKA53_09029" CDS 1776984..1777523 /locus_tag="SKA53_09029" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /translation="MADIAEPTIWARRAVFVLLACIIIITQLVPLNLEPVVWAAPDLL LAMTCVWVARKPGYVPVYIVAAVFFATDLLFQRPPGLWAALVVLLTEAIRTRHRELRS MSFAAEWAFVTLGLVTITLANRIVLAIVIIPLAPLGLTMMQLVGTVLIYPLVVFVARY LFAVAYAAPGDMRKIGQRT" gene 1777520..1779460 /locus_tag="SKA53_09034" CDS 1777520..1779460 /locus_tag="SKA53_09034" /note="COG0768 Cell division protein FtsI/penicillin-binding protein 2" /codon_start=1 /transl_table=11 /product="penicillin-binding protein 2" /db_xref="CDD:10636" /translation="MRRPPKDVIQSTRSIGRRALVVGGLQLGVLSAIGFRLRDMQVKQ ADQYRMLAEENRISMRLLPPARGMIFDRNGIAIAANEQNYRVVMVREDAGDIEQVLAR LTEIIDIPPDTLTRAIEEMRRRAPFVPVTILERVSWDDVAQINLNTPVLPGVQAEVGL SRYYPMGEDMAHVVGYVGPVSDYDLDQIENPDPLLQIPRFEYGKTGAENRLEADLRGK AGTRRIEISAAGRIIRELDRQDGIAGKDLQLTIDARLQSYVQARLDGESASAVVIDLE NGDLRAVVSSPSFDPNMFVRGISVADWQALMENKYRPLAAKAVQGTYPPGSTFKMVTL LAAMEAGVITAEDTVYCPGYADVGGTRFHCWKRGGHGNMNLHESVKQSCDVYYYDIAQ RVGIEKMAEMARKLGLGLRHDLPLSAVATGIAPDRDWKSSVRGETWRIGDTVNASIGQ GYVLTSPIQLAVMTARLATGNEITPRLLRLIDGVEQPSGIGPSLGLNENTLRRVRASL DAVCNHNRGTAYGSRILTEGRKMAGKTGTSQVRRITPEERAAGVIRNEDLPWERRDHA LFVGYAPLENPRYAVSVVVEHGGGGSAAAAPVARDILLQAQYGGPPPLDAYPANLRDQ IAAQQRRIADRIPAGTRSQGRA" gene 1779457..1780596 /locus_tag="SKA53_09039" CDS 1779457..1780596 /locus_tag="SKA53_09039" /note="COG0772 Bacterial cell division membrane protein" /codon_start=1 /transl_table=11 /product="rod shape-determining protein MreD" /db_xref="CDD:4442" /translation="MSYLEYNTKSVPVGLRKLLYLNWPLILLLIAVACAGFLMLYSVG GGSFTPWVEPQMKRFALGLAVMIAVAMVPIWFWRNMSFVAFGGSVLLLVGVEFFGDVR MGAQRWIDLGFMRLQPSELTKITLVMFLAAYYDWLPFERKSHPVWVMVPVVVILVPVA LVLQQPDLGTALLLLMGGGAIMFFAGVHWAYFATVVAAGISMIIAVFQSRGTGWQILQ EYQYSRIDTFLDPANDPLGAGYNITQAKIALGSGGWTGRGFMQGTQSQLNFLPEKHTD FIFTTLAEEFGFVGAITLLVLYMLIVVFCIASALSNKDRFGALLTLGIALTFFLFFAV NMAMVTGLTPVVGVPLPLVSYGGSAMLVLMGAFGLVQSAHVHRPR" gene 1780596..1781528 /locus_tag="SKA53_09044" CDS 1780596..1781528 /locus_tag="SKA53_09044" /note="COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases" /codon_start=1 /transl_table=11 /product="D-isomer specific 2-hydroxyacid dehydrogenase family protein" /db_xref="CDD:9986" /translation="MLRVLFSAKPQAWDEYEAPLSDAFAKAGLTVELSRNHTPAQTDY IVFAPNGPVRDFAPYVNTKAVLSLWAGVETVVDNPTLTQPLCRLVDPGLTRGMVEWVT GHVLRHHLGMDAHIRGQDGIWRDGVSPPLAAERPVTILGIGALGAACGQALAYLGFPV TGWSRSPKDVPHLQCLHGEDGLQEALAGAQIVVLLLPQTAQTQNILSGHSLALMAKGA CVINPGRGPLIDDEALLAALDSGQIAHATLDVFRREPLPADHPFWAHPRVTVTPHIAA TTRPDTAAKIIAENVRRGEAGLPFLNVVDRQLGY" gene complement(1781620..1782399) /locus_tag="SKA53_09049" CDS complement(1781620..1782399) /locus_tag="SKA53_09049" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDLDTAHAAMEAAPEDDGARLRFYERLADSEIYLLLGAEAEGD QITPALFDVEDGQYALIFDREERLSDFVGRTAPYAALPGRALVQMLAGQGVGLGLNLE VAPSAMLIPTDAVDWLAQTLLHAPAETEARLTAIAAPRHLPQSVVTGLDRKLAIAAGL ARLAYLAEVTYDTGAKGHVLAFVDAVEGAEKALASAAGEALTFSGIEAGMMDVLFLRA ADPMAARLATVGLRFDLPQPAVTAAGPAAPGMDPTRPPKLR" gene complement(1782404..1783240) /locus_tag="SKA53_09054" CDS complement(1782404..1783240) /locus_tag="SKA53_09054" /note="COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases" /codon_start=1 /transl_table=11 /product="6-phosphogluconate dehydrogenase domain protein" /db_xref="CDD:11792" /translation="MGFPMAGHLAAAGHEVTVYNRTRAKADAWVAKHGGRAADTPAAA AQGADIVLACVGNDDDLRAVCTGPDGAFTTMAKGAIFVDHTTVSAKVTRELYAAAKDK GLSFVDAPISGGQAGAENAQLSIMCGGDQADYDTISAVIAVYAKLARRIGDSGAGQMT KMCNQIAIAGLVQGLSEAMHFADKAGLDGHAVIEVISQGAAGSWQMNNRYKTMLDDHF THGFAVDWMRKDLGICLDTADENGASLPVTALVDQFYKDVQKMGGGRWDTSALFKRLQ AL" gene complement(1783340..1783477) /locus_tag="SKA53_09059" CDS complement(1783340..1783477) /locus_tag="SKA53_09059" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMRVLDAYIIEMRPDYDAKAVIGPKHAPFGGLALPAWSDMMHRL L" gene 1783546..1784199 /locus_tag="SKA53_09064" CDS 1783546..1784199 /locus_tag="SKA53_09064" /note="COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="capsular polysaccharide export ATP-binding protein" /db_xref="CDD:10854" /translation="MLEFANFSKSFWTGTQRKVILDRVSFRVELGNSLGILAPNGTGK TTLINMMAGLEKPDEGTITRTCRISFPLGFMGGVIGKLSAMENSRYIARIYGLDPDYV EAFCRWLCGIEEYFDMPVGTYSSGMKQRFTFALMLALEFDIYLIDEGMPSATDVEFNR KAGDVLRERLESTTIIIVSHQAATLERFARSAAVLRNGQLYMFDTLEEARALYDYQT" gene 1784183..1785730 /locus_tag="SKA53_09069" CDS 1784183..1785730 /locus_tag="SKA53_09069" /note="COG3524 Capsule polysaccharide export protein" /codon_start=1 /transl_table=11 /product="capsular polysaccharide export inner-membrane protein,BexC/CtrB/KpsE family" /db_xref="CDD:12852" /translation="MTIKPRVQKFRIRRDAPAAPQAEAVQPAAADEPAPTPTPTMQDQ LDAIAQEGLTARQLRMARRVAQKRGLIVGSDYDAVRQLRLAGIDPFQRQSVLELVHPK PDGAGRVQLPDTIAKGSTLPESKAIQRANKNASEIIKIQRDIARRRRLKLAMLTVRLA VFICLPTILLGWYYYNIATPMYATNSEIVIQQAQPAQASASGLSNLFQGTSIATQQDS IAVQSYLASREAMLRLDIDHGFKAHFSDPAIDLIQRLSPDASNEEAFKLYKRHVIISY DPTEGLIRMEVIAATPEKAYEFSQALIGYAEEQVDQLTRRLRGDQMQGARESYEAAER RRAEALAAWLAIQQEVQQIDPVSEAASRLGQISTLEGERQRLELVLQSRLNVDRPSQV QVQALRDQIANINALIVELRTELIGKTNDQGSLAARNTELLTAEENYTFQTVMVQQAL TQMETARIEANRQVRYLSESVRPVLPDQATYPRAFENTILAFLIFSGIYLMISLTASI LREQVSS" gene 1785730..1786563 /locus_tag="SKA53_09074" CDS 1785730..1786563 /locus_tag="SKA53_09074" /EC_number="2.5.1.55" /note="COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase" /codon_start=1 /transl_table=11 /product="2-dehydro-3-deoxyphosphooctonate aldolase" /db_xref="CDD:12229" /translation="MHIVEIGQLKVGNDLPLLLIAGPCQLESIDHAQMIAGRMAEICT AHGAQFIFKGSFDKANRTSLGGKRGLGIDGGLKVMQSVKDSIGCPVLTDIHTADQCAP VADVCDVLQIPAFLCRQTDLLIAAGETGAVINVKKGQFLAPWDMPNVVAKIESTGNRR ILVTDRGTSFGYNTLVADMRSLPTMARMGYPVVMDATHSVQQPGGQGGSSGGQREFAP VMARAAVSLGIAAVFIETHEDPDTAPSDGPNMIPLSQMDALVKSLMGFDALAKADPIR V" gene 1786832..1786903 /locus_tag="SKA53_t11081" tRNA 1786832..1786903 /locus_tag="SKA53_t11081" /product="tRNA-Gln" gene complement(1786930..1787007) /locus_tag="SKA53_09079" CDS complement(1786930..1787007) /locus_tag="SKA53_09079" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLRDVRFTDPSVIFDTDRDRRSLTA" gene complement(1787122..1788372) /locus_tag="SKA53_09084" CDS complement(1787122..1788372) /locus_tag="SKA53_09084" /note="COG2319 FOG: WD40 repeat" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12802" /translation="MRSGLIPLIVAAGLIGPAAAQDLVGHGGPVGALDAGQGLLVSGG FDTRAILWDLDAATARNVTRFHSGNVTAVRLLPMGGFMTAGQDGRLAVWQADGRIPEF VTPPGQSAIASLDVSDDGAQVAAGYWDGRVVRLDLATRETQTFVAHSDRVTGLGFLPG GDLVTVGGDLLLARWTPLSDMTFRIGLPALPNGLVRADDGIAVIFADGALRLYDDAGV LRSDRFLTDRPLVSVASGSGHIAAGTLDGTVWLIQSNDLVPRQSFMAANGPVWGLAIA QGQLFTSGTDGTIRRWSLDGAALGGGVTEAVPAAHDSSRGAEIWKNCAVCHSLAPDDH SRAGPSLFGIFGRKIGSQPGYAYSDALQQLAIIWTPQTLSDLFTYGPEAYTPGSRMPE QRIAAPEDRDALAVYLERIVAVAQ" gene complement(1788386..1788541) /locus_tag="SKA53_09089" CDS complement(1788386..1788541) /locus_tag="SKA53_09089" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKAFIFAVIFAGVVAVGAASVLQDSFQQPSYSAYATEGARVGEP GANLYAY" gene complement(1788569..1789660) /locus_tag="SKA53_09094" CDS complement(1788569..1789660) /locus_tag="SKA53_09094" /note="COG0489 ATPases involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="probable multidrug-resistance related protein" /db_xref="CDD:10360" /translation="MSQGNRDLDDDISGVLGAMLLPDGQPLGTSGRIAGLNQSGGRVS LSIQITPEEAGAFAPLRDTLEARLRTLAGVTSAFVVLTAERAAPPKLVAQTPAKIDPL DSVRHVIAVASGKGGVGKSTTTVNLGLALVAMGLRVGILDADIYGPSLPTLLGLHGKP GMGEGRKLRPMRAYGLQAMSMGLLVEPETAMVWRGPMVMSAITQMMADVEWGALDVLL VDMPPGTGDAQLALAQGTRLAGAVIVSTPQDLSLIDVRRGIAMFRKVDVPILGVIENM SQFICPDCGSSHAIFGDGGARTEATRLAVPFLGAVPLTMALRAASDAGQPIVARDPDG PLGRIYKDIAQTMLDGLGDEKAGLAPRKI" gene complement(1789742..1790704) /locus_tag="SKA53_09099" CDS complement(1789742..1790704) /locus_tag="SKA53_09099" /note="COG2864 Cytochrome b subunit of formate dehydrogenase" /codon_start=1 /transl_table=11 /product="putative formate dehydrogenase (EC 1.2.1.2)" /db_xref="CDD:12216" /translation="MIALAVLVFVGQANAQVNPTERAVTEESMFEALGTDTNAVAGRV SIPDSNAANLIKPDNKSWAAFQVGTVQTLSVIAVVGMVGLLALFYMFRGRIKVDSGMS GLKILRFGAIDRFAHWTLASTFIILALTGLNLIIGTSVILPLLGENAFGALTSLGKIA HNYLAWPFMVALALIFVLWVIDNIPDKVDVEWLKQGGGIFKKGVHPPAKKFNAGQKVI FWAVIIGGAGLSFTGVMLLFPGVAGAAADWQLYQTIHALIAAGLSAIIIAHIYIGSVG MEGAFDAMGSGEVDVNWAKEHHGLWVEQEKAKSSKDSALSTPAE" gene complement(1790739..1791335) /locus_tag="SKA53_09104" CDS complement(1790739..1791335) /locus_tag="SKA53_09104" /note="COG0437 Fe-S-cluster-containing hydrogenase components 1" /codon_start=1 /transl_table=11 /product="formate dehydrogenase iron-sulfur subunit" /db_xref="CDD:10311" /translation="MARMKFLCDADRCIECNACVTACKNEHEVPWGINRRRVVTLNDG LPGERSVSMACMHCTDAPCASVCPVDCFYTTDDAVVLHNKDTCIGCGYCSYACPFGAP QYPQTANFGTRGKMDKCTYCSGGPEPDMSQAEYVKYGSNRLAEGKLPLCAEMCSTKAL LAGDGDIIADIYRERVVTRGYGSGAWGWRTAYGETVAV" gene complement(1791351..1794320) /locus_tag="SKA53_09109" CDS complement(1791351..1794320) /locus_tag="SKA53_09109" /note="COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing" /codon_start=1 /transl_table=11 /product="formate dehydrogenase, alpha subunit, putative" /db_xref="CDD:28622" /translation="MLVKRRSREATATGRLSQLAAGVAAKPIDRRSFLRASGLSIGGL AVIATVGSGLTRRVEAAGFTDPAQPIEIKKNMCTHCSVGCSVVAEVQNGVWVGQEPAY NSPINRGTHCAKGASVREVVHGDRRLKYPMKKVGGEWQRISWDQALDEIAAKMGEIRE NSGADSVYLLGSAKFSNEGSYLFRKFAAFWGTNNVDHQARICHSTTVAGVANTWGYGA MTNSYNDIRNSKTVIFMGSNAAEAHPVSMQHILTGKETQRANVIVLDPRFTRTAAHAT EYIRFRPGTDIAVINGMLYHIFENGWEDTEYLAQRVYGMDQVREVVKAYTPEVVEKIA GVDGDTLKRAAEKFAKERPSTFIWCMGGTQHTVGTANVRAYNILLLATGNVGGQGNGA NIFRGHCNVQGATDFGLDVGNLPCYYGLGAGAWQHWSRVWEVPYNYFVSRFDEVPSKG GRDARTSEENMAIPGITSTRWFDAVTMDSEEVDQKDNIKAMLVFGHGGNTVPRMQDAR RGMDALDLLVVADPHPTTFAALHSRTDNTYLLPVCTQFECSGSRTASNRSVQWGEKVV DPIFESDNDYAVMYGLSQRLGFADEMFKNFELVQGKFRMEPTPESILREINRGGWSVG YTGQSPERLKAHMANQQHFDLVTLKALPDAPAEIAGDFYGLPWPCWGTPEFRHPGSHI LYNTNIPVKEGGGAFRPRFGLERDGETLLAEGSWNPGSEIQDGYPQFTMGVLKELGWD TDLTARERAVIEGIGGGDEEKINGVSWSLDLSGGIQRVAIEHGCVPYGNGKARAVAWN LPDPIPVHREPIYSARPELVAEYPTNDDRRQQRMPNIGKVVQQSAVDRNIAADFPIIL TSGRLVEYEGGGEETRSNPWLAELQQDMFVEINPADATARGIVDGDWVWVYGPENESK ARVKALVTERVNSGLAFMPFHFAGWFQGEDQRGNYPAGTDPIVLGESVNVITSYGYDP VTGMHEGKVTLCQIAAA" gene complement(1794320..1794532) /locus_tag="SKA53_09114" CDS complement(1794320..1794532) /locus_tag="SKA53_09114" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTKDKHDPMSRRAFFGVAATGASAAALTMGGARPVMAQQTGDER TKARYRETEHVAAFYRTNRYYDQGEN" gene complement(1794595..1795116) /locus_tag="SKA53_09119" CDS complement(1794595..1795116) /locus_tag="SKA53_09119" /note="COG3381 Uncharacterized component of anaerobic dehydrogenases" /codon_start=1 /transl_table=11 /product="putative chaperone" /db_xref="CDD:12713" /translation="MLSSAPDQALLNHVAQLQGDKTPLGCAFTALALCAKTADSARVE REFFELFIGVGRGELLPYSSFYQTGFLNERPLAVLRDDLSRLGVARANGRHEPEDHIA LLMDVMADMISGDVVASADIQRAFFNRHIAPWAAQFFDDLAIAPSADFYRPLAEIGRL LTDIEARAFALAA" gene complement(1795330..1795977) /locus_tag="SKA53_09124" CDS complement(1795330..1795977) /locus_tag="SKA53_09124" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPKPTDETESFLGRWSRNKRAHPVMPEGVAEPEPATNQESEQEP LTEEQIAALPDIDDLTPQTDIRVFLQKGVPQALRNAALRRKWMLVPGIRDHNDPAVDY AWDWNTPGGVPGDGAAPSPERAAQMLRELFAPRQDPAATQVADTEGDSDHPGSIPTQE SAVRQTTAALTQQETAANDPSSEPDTAPQTAQQQDIDLQTDLTPARRRHGGALPA" gene complement(1795981..1796511) /locus_tag="SKA53_09129" CDS complement(1795981..1796511) /locus_tag="SKA53_09129" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPIKTLRISVLAIRRPAVTKWGAGELRPCSVLPQEPDAAPHTLL YAENGVETWYLGGRDLSLYSGDTLHHQDNLVSGRPALWVALRGQDPRTAEIVNVTADP YEGEGYASDLDLFVEPVPMPAVIEAQIAEFVAQHHVDMPFKKRKRDVIDPNAPPARAP RVLHDADKWAHSPRKR" gene complement(1796522..1797511) /locus_tag="SKA53_09134" CDS complement(1796522..1797511) /locus_tag="SKA53_09134" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPEFWVASGHHLTRLDNAGRMTVTDELILAWLARPEVLPPPEAC AAERTLHKRLMDQPRAKVSDMELIALQDPDARENWRFLLTLRDRLIAAGTVENGYAQI VQDGITLPVVFMSQLVQLILRNALDGCDDPQVLRAAECFFRPQRSHIQNDTLFLADEE LVQLLEQEMHSSPLTAMLSGGIDGLDVLSADNDWTYWSRSDAHTMVLNFGGDAAARAG MATAIAGYLRHMLGLDCTVTAQASADNIDLRWFVGLDQAGTAIGNALWNKQPMPATLV GLFRLDIADHSRVTPDLRGQPIWLFLGLGADGAVRIKPQNLLTGLPLAAPVLN" gene complement(1797511..1798071) /locus_tag="SKA53_09139" CDS complement(1797511..1798071) /locus_tag="SKA53_09139" /note="COG1051 ADP-ribose pyrophosphatase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIRLPRTIQLDASDKVVFSRAASPGEWAVPGTFLFWGRAPDDLT RKEAIAFRSGFLGVDSFGHATLVTVQEARPDERDAMVLTLARQLVTHLGAPSLEAARP AAEEEVALAESLCRAHPLNTLIALHRKHDAGDIREQFRTLKPRDETAFSGSHLQGHDR AFQFFEETEDTGPEDHVDIFVLRGKA" gene complement(1798068..1798802) /locus_tag="SKA53_09144" CDS complement(1798068..1798802) /locus_tag="SKA53_09144" /note="COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10214" /translation="MDDRSQTHGLGHIALPPPYTLHAGTGPDVLEQAVQLAPEHGAGT LVCHASSGLLAFAVVLEPTQKLQEAQMAFPLGMVAVADALAAHCPPERAVRLNWPDEI RYDKARIGGGRFAVAPGTGPQDVPDWMVFAAELISERDHLLEPGRFPESTSLKEEDFD PHEDIIATFASYMMLYFDRWLHDGLDAVTNRYLMRIDPPLLRGVRRIEGDRLVEITPA GGGKRSEPLLQSFNATDWRDAKGPKL" gene 1798961..1800865 /locus_tag="SKA53_09149" CDS 1798961..1800865 /locus_tag="SKA53_09149" /note="COG1145 Ferredoxin" /codon_start=1 /transl_table=11 /product="putative ferredoxin" /db_xref="CDD:10865" /translation="MKVAVEALGGQGKGAHHLCRSQLDHFRKALGDFAEVTVACTQEA PLFAEVAEDMGYEGTLHFANIRETAGWSEAGHDAAPKMAALLAMAEIAATPFDVISLE SNGITLILGRDQAAVDLAQSLSDTLDITVLLLPGADVVPRPQTTWPVLQGRVRQATGH LGAFELTVDDYAAPVVSSRAQLAFDAARNGAVSTCDLVIDVTGGQPLFHETRPGYLRA DPRDPVALAKLVTEASQMVGTFDKPKYINFIPDLCAHSRNTLTGCTRCLNLCPTGAIT SNGDTVAIDPNICAGCGQCAAACPTGAAAYAMPVTENIAARLRAGLEAYFAAGGKHAP IVLFHDADHGSALIDATARFGKGLPAHVIPVQVNEPSQIGPEIMAAALAYGAGGLRVL AKERPAHPLDGLQDSLDLMAVICTQTGHDPAACGLLSIDDPDALDSALWQPATAARAT RSGFLPQDDKRGLLLLAVEEMNRTAPAPTDFIALPQGAPFGAVTLDHDACTLCLACVG ACPAGALSDNPDLPMLRFTESACVQCSICVATCPEDALSLTPQIDLAAWAAPRRVLKQ EDPFACTSCAKPFGTKSSIERVMQKLEDHWMFAGDTGAERRRLLTMCDDCRTREVVMA GFDPHEKAET" gene complement(1800940..1801662) /locus_tag="SKA53_09154" CDS complement(1800940..1801662) /locus_tag="SKA53_09154" /note="COG3842 ABC-type spermidine/putrescine transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:5341" /translation="MVNEHNILPLTLREITVKRRGKHILGPVSLTLQGKGISVVVGPN GSGKTTLLRAMHGLDRISAGHKAWAVSDAQAHAAQSFVFQAPIMMRRTVRDNIAYPLV LRGVNRRDARAAADVWAARVGLGSAVLRAATVLSGGEKQKLALARALVTAPQVLFLDE PCANLDGHATQEIEAILHAACADGTRVVMSTHDLGQARRLADEVLFVHAGQVVEILPA AVFFAGPASAQAAAFLNGDLVL" gene complement(1801656..1802360) /locus_tag="SKA53_09159" CDS complement(1801656..1802360) /locus_tag="SKA53_09159" /note="COG4662 ABC-type tungstate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="sulfate/tungstate uptake family ABC transporter, permease protein" /db_xref="CDD:13805" /translation="MSDIADGFATAARLVVSLDPELIEITLRSLHVTLSATAVASVIG LPLGAWLAITRFPGRRYVIALLNALMGLPPVVVGLIVYIMLSRSGPFGVLGLLFTPTA MIIAQVIIITPLVASVAHQAMRELWADYHDLLISLHASRRQRIATLVWDGRRTLLTAQ LAGFGRGIGEVGAIMIVGGNIDNATRVLTSAISLETGRGEFALALALGFILIGLAVVV NLCIHVLSRTEQGSRW" gene complement(1802525..1803079) /locus_tag="SKA53_09164" CDS complement(1802525..1803079) /locus_tag="SKA53_09164" /note="COG4681 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27259" /translation="MAQNATIYKVELSVSDMDRHYYETHKLTLAKHPSETDERLMVRI VAFALNAHEHLEMTKGLSTDDEPDIWQKSLSGELDVWVALGLPSEKVLRQSCGKAGKV VVYPYGGRTAEIWWDKIKNSTIRFDNLQVVNFPQADTDTLAALAGRAMKLQVNIQDGE VMISLDDRIVYVSPQQWKSAAPAA" gene 1803154..1804302 /locus_tag="SKA53_09169" CDS 1803154..1804302 /locus_tag="SKA53_09169" /note="COG2358 TRAP-type uncharacterized transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="immunogenic protein" /db_xref="CDD:12030" /translation="MRCGPVCAALDEKYHHQPKNRPKKLSSSGSLRYTVTIPAINRAR EGAKPTNGGDIMTTSTGRGLKALFAPIAIVAFGIGSAAQAQELSIATGGTGGVYYPYG GGLAEVINNHVDGYSASVEVTGASVENMALVQRGDSDIAIALADTVYQAYTGTGAFEG RQIGEARALASIYPNAVQLVTLADSGITSMQDLRGQRVSVGAPGSGTELSAQIILAAN GITYDDFDPQRLNFNETADAIRDGDIVAGFWSVGPPTSSIMNLAATRAISIIGLSADE IANARAAEPTFAPFALRAGLYDGMAEAVQTISTPNVLIVHADMDEELAYNITKAMYEN VADLIAIHPAANDTTIDFSVASTPIPFHPGALRYLEEVGAAVQDHQRP" gene 1804299..1804775 /locus_tag="SKA53_09174" CDS 1804299..1804775 /locus_tag="SKA53_09174" /note="COG2031 Short chain fatty acids transporter" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MITTNAGRHGCAALLCAALFAGGPAMAQPVLVVETTDAPLGELP FQPGAEICLRWNHSVTGGAVADCFENVAGQLTLTRSYLHDFAAGLGEVAGRGRIAPAA TGGYWITEIAEPIPDNSLGLRVGPAAVNHRLTSAGQAIALSQIAPDTAVRLTLRPN" gene 1804807..1806855 /locus_tag="SKA53_09179" CDS 1804807..1806855 /locus_tag="SKA53_09179" /note="COG4666 TRAP-type uncharacterized transport system, fused permease components" /codon_start=1 /transl_table=11 /product="hypothetical permease" /db_xref="CDD:13809" /translation="MSSQTSDTSHKNQDLTDLPPAMRSADEVQPRPILWTITIVAITM SLFQMYTAGIEPLGLFYQRSAHLGFILFLAFLIFPVTGTTRPRGSIGWIIDAICLTAA FLSGFYIFYFLDDIINRAGWWSRTDIVMGIIATLAVLEASRRVVGLGMTIIGLIAIAY ALAGPRGALPGLGEWMPGILSHRGASVDRLVGQLYLGQEGIFGLPLGVAATYVFMFVL FGAFLEVTGAGKFFIDLAFAATGRKAGGPAKAAVIASAGMGSISGSAIANVVTTGAFT IPLMKKLGYKPKEAGGIEAAASTGGQITPPLMGAGAFLISEYTNVPYIDIVMVSIFPA ILYLGTVYLFVHLVAMKAGMTGLSAADLPIVRNVLAAGWQFIVPLVVLIYLLVNNISP TRVGFWAILSVIAVTALRAGFTLIVLDPKNGTPLTADRLKASILSGLTLVAKALELGA RNAVAVSVACAVAGIIVGVVGLTGLGLKFSSMMISLSGGSLPLALVFVLLASLILGMG LPVTAAYIVLIVLVGPALHNEFGVPLLIAHLVVFWYSQDSNVTPPIALAGFAGAAIAG SKPMETSMQAWKYAKGLYLIPAFMVFNPEIIMGGETWYVIWTGIMIVIGLIGFAAAIE GYLFTWMDNLSRLLVVPGVIAIFNPDAMIEAAGALVVLALLVWNWLKSRSAQSVARTG " gene complement(1806914..1807930) /locus_tag="SKA53_09184" CDS complement(1806914..1807930) /locus_tag="SKA53_09184" /note="COG3608 Predicted deacylase" /codon_start=1 /transl_table=11 /product="succinylglutamate desuccinylase/aspartoacylase family protein" /db_xref="CDD:12932" /translation="MFLQDPPRAGGQGMITPTIPLDAQGVHHGFLKLPYSRDDSAWGS VMTPITVIANGDGPTALLTGANHGDEYEGPVALQELAATLQPDQITGRVIILPMMNLP AFAKGARCSPIDGANMNRSFPGRADGSVTQKICHYIATELVPLADIVLDFHSGGRTLD FLPFAAAHILPDKAQEAACMAAMQAFNAPYSVRMLEIDAVGMFDTEVENQGKTFVTTE LGGAGMATARSVAIARKGIRNLLIHAGIMAGALQVGPTVQLDMPDDSCFVFSHHAGLI DYLVDLGDPVAKDQPIARIWPADRTGVPPVICHAACTGILTARHVPGLVKVGDFVALV AVVT" gene complement(1807888..1809072) /locus_tag="SKA53_09189" CDS complement(1807888..1809072) /locus_tag="SKA53_09189" /note="COG0006 Xaa-Pro aminopeptidase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9882" /translation="MTTFEANFPTTEYLRRITKTRAEMQLRGLDAIFVTDPSNMSWLT GYDGWSFYVFQGVILTHDGDPVWWGRAMDTLGARRTVFMESDDNIRGYDDTFVQNPDK HPMQELAKLLAELGLAQARIGVEMDNYYYSAAAHAALLAGLPKARISDCTGLVNWQRA VKSDREIDYMRRAARIVETMHARIVELAEPGLRKNDLIADIYATGIRGADGHWGDYPA IVPMAPSGMDATAPHLTWDDRPMKTGEATFFEIAGAHRRYQCPQSRTLFLGKVPDKYR DAEAAVLDAVEAGLEQARPGNQAQDIANAFNAALNKAGYVKDSRCGYAIGISYPPDWG ERTISFRKGDTTILEPGMTFHFMPALWLDDGGLEITEPILITDTGYECFCKTPRALVV KA" gene 1809230..1810621 /locus_tag="SKA53_09194" CDS 1809230..1810621 /locus_tag="SKA53_09194" /note="COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10036" /translation="MENVMTEQFANDQLTQWDHDHFFHPSTHLGQFARREMGNRIIQS AKGVHITDREGRRSLDAFAGLYCVNIGYGHPEIAEAIAKQAHELAYYHAYVGHGTEAS ITLSRMIAERAPEGMNHVYYGLSGSDANETNVKLVWYYNNVLGRPEKKKIISRWRGYH GSGLVTGSLTGLDLFHKKFDLPLPQILHTEAPYFYRRADRDMDEAAFTAHCAAKLEEM ILHEGPDTIAAFIGEPMLGTGGIVPPPAGYWDAIQTVLRKYDILLIADEVVTGFGRLG TMMGSDHYGLKPDLITIAKGLTSAYAPLSGSIVSDRMWEVLEKGTDEFGPFGHGWTYS AHPICAAAGVANLKLLDEQNLVANAGSVGAYLNETMAAAMGSHTHVGEVRGTGMLCAV ELIKDRDDRVFFDPADKVAPRVVAAMLERGVIARAMPQGDILGFAPPFPLTRAQADEI VTATKDAVAQVLG" gene complement(1810733..1813024) /locus_tag="SKA53_09199" CDS complement(1810733..1813024) /locus_tag="SKA53_09199" /note="COG1982 Arginine/lysine/ornithine decarboxylases" /codon_start=1 /transl_table=11 /product="predicted Orn/Lys/Arg decarboxylase" /db_xref="CDD:11690" /translation="MKFRFPIFIIDEDFRSENSSGLGIRAMAEAIENEGFEVVGVTSY GDLSQFAQQQSRASAFVLSIDDEEFSPGPDLDPAVLNLRQFIQEVRRKNEDVPIYLHG ETKTSRHLPNDILRELHGFIHMFEDTPEFVARHIVHEAKKYLEGIQPPFFKALLDYAE DGSYSWHCPGHSGGVAFLKSPIGQMYHQFYGENMLRADVCNSVEELGQLLDHNGAIGA SERNAARIFNADHCFFVTNGTSTSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGA IPVFLKPTRNHYGIIGPIPQNEFEIDTIREKIRANPLLSHIDADTVKPRIMTLTQSTY DGVLYNTETIKGLLDGYVENFHFDEAWLPHAAFHTFYSDFHSMGRKRERPRHAVTYAT QSIHKLLAGISQASHVLVQDSQDTKLDRHLFNEAYLMHTSTSPQYSIIASCDVAAAMM EPPGGVALVEESIMEALDFRRAMRKVDAEFGDDEWWFQVWGPDALVEEGIGDPKDWVL KKTDADGVQASDGADSWHGFGDMARGFNMLDPIKTTIVTPGLNLDGRFEEMGIPASIV TKYLVENGVVVEKTGLYSFFIMFTIGITKGRWNSLLAALQQFKDDYGRNQPLWRVMPD FIAKHPHYEQMGLRDLCQHVHQLYARYDIAILSTEMYLSDLQPAMAPNDAYAHIARRT TERVAIDDLVGRITTSLVTPYPPGIPLLIPGEVFNTKIVEYLKFNREFERLCPGFEND IHGLVVETGADGVKRYYADCVAV" gene complement(1813177..1813575) /locus_tag="SKA53_09204" CDS complement(1813177..1813575) /locus_tag="SKA53_09204" /note="COG0789 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="Cu(I)-responsive transcriptional regulator" /db_xref="CDD:27755" /translation="MMNIGEVAIKSGLPAKTIRYYEDIGLIRPDRHDNGYRLFRQTHL HQLMFVARARSLGFSIDDCRVLLALYDDDSRASAQVKALAQDHLAQIDAKIAGLRAMR DTLADLVDACHGDSRPDCPILKDLAAKHHG" gene complement(1813583..1815844) /locus_tag="SKA53_09209" CDS complement(1813583..1815844) /locus_tag="SKA53_09209" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="copper-translocating P-type ATPase" /db_xref="CDD:11924" /translation="MTCASCVGRVDRALAAVPGVQSVAVNLATETATITLDDRRITAA QLADVSTKAGYPAVAAEPDQTSVNAARKADEAAVLARSTLFAAALALPVFILEMGAHL VPAFHHVIADTIGVQTSWIIQFVLTTLVLFGPGRVFFAKGLPALFKGAPDMNSLVALG TGAAWTYSVVATFLPTLIRADVRAVYFEAAAVIVVLILLGRLLEARAKGRTGAAIQAL MGLQARQARVLRDGTLVAVDVDALVVGDIITLRPGERVPVDGTVTEGSSPVDESMMTG EPVPVVKTTGDALTGGTVNGQGGLTFAATRVGKDTTLAQIIRMVTEAQGAKLPIQDVV DRVTLWFVPAILLLAVLTVAVWLAVGPDPTLALVAGVSVLIIACPCAMGLAVPTSIMV GSGRAAEMGVLFRKGAALQQLADVSVIAFDKTGTLTAGKPHLTDLVLADGFDRADVLR LAAAVEAKSEHPIGAAIVNAARAEGLGAAQVSDFRAIAGFGVSATVDGRRVLIGADRL LARDGIATGALAATETALAERGRTALFVAIDGQAAAVIAVADPVKPGSAVAIAALKAK GMKIAMITGDKRETAEAIAREIGIDHVVAGVLPDGKVAALDQLRVQGKIAFVGDGIND APALAHADIGIAIGTGTDVAIETADLVLMSGDVRGVVNAVAVSQATMRNIRQNLGWAF GYNLALVPVAAGVLYPVFGLLLSPVFAAAAMALSSVSVVSNALRLRRLRPVMDEKPPQ PTVNRGTAHQPAA" gene complement(1816132..1816857) /locus_tag="SKA53_09214" CDS complement(1816132..1816857) /locus_tag="SKA53_09214" /note="COG1651 Protein-disulfide isomerase" /codon_start=1 /transl_table=11 /product="27kDa outer membrane protein" /db_xref="CDD:11362" /translation="MTMTRFFSIAAICAFPLSIGAQTMTEDQVRDLVLDTIRANPQIV VEALQILELEQQNAEAAAAQVALADQRALLENDPNAPVIGNPQGDVTVVEFFDYNCPY CRNAKLELDGLLSADSNVRVVLREWPVLGEGSVFAARAALASRVQGKYAEFHDALMMM QGRAEEQSVIRVAQSVGLDVDQLRRDMEAPAVTEHLKMSDGLGRALGFSGTPSFVIGE NLAPGMIRVDQMQRLVSAARAAD" gene complement(1816891..1817466) /locus_tag="SKA53_09219" CDS complement(1816891..1817466) /locus_tag="SKA53_09219" /note="COG1376 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26133" /translation="MNNRNNKIPSRRALLLGATAATLFAPSILRAQTERPPVDRNIAA FRVHEWRDHFDSLGVGAILADTKSMFLQHWTPDGDMRIYPTSVPLSDDLTRTGFTEVI DKRVAPSWAPTPAMRERNPEWPAFIPGGDPLNPMGSHALYLSWQFYRIHGTQDTRKIG RKSSNGCIGLYNEQIAEVYERAPIGTKVRLI" gene 1817692..1817976 /locus_tag="SKA53_09224" CDS 1817692..1817976 /locus_tag="SKA53_09224" /note="COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11082" /translation="MPADTATIALPPALTFEACEDLFAALKQAQGNDLIIDGSNVSRL GGLAAQILATASVAWATNGRSLTLVNETDALRQGLELLALWPLPQQGRAL" gene 1817976..1818347 /locus_tag="SKA53_09229" CDS 1817976..1818347 /locus_tag="SKA53_09229" /note="COG0784 FOG: CheY-like receiver" /codon_start=1 /transl_table=11 /product="chemotaxis regulator protein" /db_xref="CDD:5334" /translation="MTKRILAIDDSRTIRSLLTQTLQKAGFEVSTAVDGVDGIEKFQH EDADLVITDVNMPNKDGFGVIADIRGGTRNRTVPVLVLTTESGAALKERARQAGATGW IVKPFDDEALVAVIRRLTGAV" gene 1818347..1818955 /locus_tag="SKA53_09234" CDS 1818347..1818955 /locus_tag="SKA53_09234" /note="COG0643 Chemotaxis protein histidine kinase and related kinases" /codon_start=1 /transl_table=11 /product="Chemotaxis histidine protein kinase," /db_xref="CDD:10513" /translation="MTADMTMRDVFFEECEDLIAALTEGLTAMRDGSTDSETVNAVFR AVHSVKGAAGAFALDDLVGFAHTFETVLDHVRSQRLTLDDRILHVLQRSGDILADLIE TAREELPTNSAQVDPVLADLQSFLGDAPAEAEDFTFEALTLAFDGPADAGSTYVVDFT PNAAFYTSGNDPVLIIAALQSLGTTRVTVDLSRLPTGLDDLH" gene 1818980..1820440 /locus_tag="SKA53_09239" CDS 1818980..1820440 /locus_tag="SKA53_09239" /note="COG0643 Chemotaxis protein histidine kinase and related kinases" /codon_start=1 /transl_table=11 /product="Chemotaxis histidine protein kinase," /db_xref="CDD:10513" /translation="MEIEGLGSDLPILEVFEFVDDLCALQVKLLDEDTAVPDIATATA PDSPVEQDGMDAAAGMAGDMSDQKARNAADKGSTRAASSLRVDPERIDRLINAVGELI INQSVISQRLQHANLPNTAELFADLDDYKLLAREIQEGVMAIRAQPVKPLFQRMLRIA REAADATGKVVELITEGEATEVDKTVIERLADPLTHMIRNAIDHGIEAPDLRTAAGKN RQGRLRLAARQRSGSIVIEIADDGAGLNRPRIREIAVSKGLVAEDAQLSEAEIDHLLF APGFSTAKEVTNLSGRGVGMDVVKTAITALGGRVAISSQFGQGTTFSITLPLTLAVMD GMIINLGGQTMVVPISSIVETIRPKDADLSQIGLNNTLLRIRGEYVPIIDLAERMGQV ATLRDMTDRVLLLIQTDSVPQCALAVDDIFDQRQVVVKSMQGNYGEISGISGATILGD GKIALIIDPEAVAQGNSVYAVTNSQNGRDVSYVAAC" gene 1820424..1820891 /locus_tag="SKA53_09244" CDS 1820424..1820891 /locus_tag="SKA53_09244" /note="COG0835 Chemotaxis signal transduction protein" /codon_start=1 /transl_table=11 /product="Putative chemotaxis scaffold protein," /db_xref="CDD:10702" /translation="MSQLAELQKSERLEFVTLVAGGQNFCIEITQIREIRRWTPVTVL PHSPDHVLGVINLRGAVIPIIDLAAKLGFAKIMPTERHVIIIIAVEDRIIGLLVESVS EILGVDSHTVRETPRGPEDTTTRAILGIIPLGDDMTKIISLSTLLAPANQVAA" gene 1820888..1821787 /locus_tag="SKA53_09249" CDS 1820888..1821787 /locus_tag="SKA53_09249" /note="COG1352 Methylase of chemotaxis methyl-accepting proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24209" /translation="MTMPDNIARSDQTMREYQFTDHDFQTIATLAHQRYGLHLQPSKK PLVYSRLTKRLRALDLPDFESYCALLSDPRGHAEQSHLLSALTTNVTHFFRERHHFTY LREKILPDLVEKAKKGSAVRIWSSACSAGQEAYSIAAMIRDACPEASRLDIKLLATDV DPQMIQKARQARYDRDQADAIPDEYKRLMIEDDGSQQFKIRQDLASLVSFGELNLIGD WPMRRRFDVIFCRNAAIYFDKDTQVRLWQRFADVLQDDGHLMIGHSERLTGPAQSEFR SVAITTYQRLPRNTALARPQTKD" gene 1821791..1822177 /locus_tag="SKA53_09254" CDS 1821791..1822177 /locus_tag="SKA53_09254" /note="COG0784 FOG: CheY-like receiver" /codon_start=1 /transl_table=11 /product="Chemotaxis response regulator," /db_xref="CDD:5334" /translation="MSLKDTLRVMIVDDMGVSRGLLVQAIEEMGIWKNQAENDGRAAL NKLIADPVHLVLSDYNMPGMDGLELLRALRQHKATARIGFILVTGNPTPDLVAKGKAL GLNNIIKKPFSTASMKQCIETVVGKL" gene 1822174..1822533 /locus_tag="SKA53_09259" CDS 1822174..1822533 /locus_tag="SKA53_09259" /EC_number="3.1.1.61" /codon_start=1 /transl_table=11 /product="chemotaxis-specific methylesterase" /translation="MTTQSITHRPAAARTLTNVGTALREVAMIVTRLEEAALRTCACA ADLPQKTKSLQDFDLVLQSLADLATLIEAMGEPGANQATSDCGKWIAQMRLAWLRDLV GDAPEPVDHDRTQIAIF" gene 1822661..1823647 /locus_tag="SKA53_09264" CDS 1822661..1823647 /locus_tag="SKA53_09264" /note="COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain" /codon_start=1 /transl_table=11 /product="protein-glutamate methylesterase" /db_xref="CDD:11908" /translation="MRIVIAHRSVILLGQLQRRLERLKIDVVCAATELTEVYNFAEHH EPDCVVLTTDIADCPEFELLATLFGIMGIGCVVLGTPKQANLTNAALRAISAIRVLPS NVSDRDLTAALVPGGRRQHPRAPAATPIPAGRVDPRSTILIGSSTGGIDALMQILPHL HPGAPPTVIVQHTGGNFASSLIRLLDGGTAAKVVAATQDTTLQRGHVYLASGDTHHVR LVHGSPARIKLDAAPRQSGHRPSVDALFHSAVPFASHVTAAILTGMGRDGAEGITALR AAGARTFGQDEATCIVYGMPRVAKSLGGIEIELPIHQIGPSLLRAAQQRQRA" gene 1823644..1824174 /locus_tag="SKA53_09269" CDS 1823644..1824174 /locus_tag="SKA53_09269" /note="COG1871 Chemotaxis protein; stimulates methylation of MCP proteins" /codon_start=1 /transl_table=11 /product="chemotaxis protein CheD" /db_xref="CDD:11580" /translation="MSEPNTTSPKIMTIVQGDFAVSNDAQVVMSTVLGSCVAVCIFDL QAKVGGMNHFLLASGGDSNTNDLKYGVNAMELLINRILGAGGDRRRLQAKIFGGARMT VHARDIGQSNGEFALAFLEREGIPCLSQSLGGTMARRVQFTPTTGAARQMQIAESPPP ETPVVRPRPAPEITLF" gene complement(1824207..1826060) /locus_tag="SKA53_09274" CDS complement(1824207..1826060) /locus_tag="SKA53_09274" /EC_number="2.3.1.86" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="acyl-CoA synthase" /db_xref="CDD:10192" /translation="MADRDAIHNEMPWAKRSLPMTTYALLSQTAAAHGGRKAVSFSLL SDPDAFCETLTWSELQAKTAQAANLFRDLGIGENDVVAFVLPNATETILTYLGGQVAG IVNPINPLLDAEQIAAILRETKAKVVVTLRAFPKTDVAQKTAEAVRLAPDVTTVLEVD LHRYLTGLKRLVVPLIRPKNPVAHKAKVLDFNAELAKHPTSLSFADSDKDRVAAYFHT GGTTGMPKVVQHRYSGIVYNAWLGARLLFTEKDVQICPLPLFHVFAATVSLGASLGSG AQVVFPTPQGYRGDGVFDNFWKLIAKHKVTFMITVPTAMSALMQRKVDADISSLRLAF CGSAPLPLELYKKFEAAAGVTICEGYGLTEATCLVSINPPDGEKRVGSIGLPFPYTDV TIVSSATGLPCDVDEIGEICIASPGVFSGQTYTEASKNRDIFYADHLRTGDLGRIDAD GYLWITGRAKDLIIRGGHNIDPAEIEEAMAGHPAVAFAGAIGQPDAHAGEVPCVYLEL VAGADVTEEALLDYAKQHIHERAAHPKHLEVLAELPKTAVGKIFKPELRKRAIMRIYA AALADLAAEVDGVLEDKKRGLVARISADPALARKIEIALGPYTIPWDIVQK" gene complement(1826184..1827974) /locus_tag="SKA53_09279" CDS complement(1826184..1827974) /locus_tag="SKA53_09279" /note="COG1132 ABC-type multidrug transport system, ATPase and permease components" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP binding/permease protein" /db_xref="CDD:10852" /translation="MAETVQTKAEDRPSSKKIGALQALWPFIKPYKLNLAGAGFALVF TAMVALSLPLIARLVVDNFGLDSVAISRHFMSLLAFAVLLAFGTALRYYLVTRLGERV VADLRKAVFNRMISMSPAFYERIMTGEVLSRITTDTTLILSVIGSSASIALRNILIFI GGVILMLLTSVKMSIMVLWPIPVVLFPILFLGRRVRSLSRENQDLIAESSGDASELLT SAQTVQAFTHEGLSRAKFDAVTEQSYRSARRRILTRAFLTAVVIFMVFAAIVLFLQMG SQDVVAGEITEGGLVQFMIYTIMVGGAVAALSEVWGELQRAAGATERLIELLTIEDSV TDPVQPHRLPTPVRGDLRFENLRFSYPSRMSISALDGIDLHIAAGETVALVGPSGAGK STIIQLVQRFYDPQEGAVTLDGIDLRCLNRAEFRRHIALVPQDPVIFADTARENIRFG RPDASDSEVEAAAKAAAAHDFLIALPGGYDSYVGERGVMLSGGQKQRIAIARAILRDA PVLLLDEATSALDAESEHAVQRAVEDLAKTRTTLIVAHRLATVKKADRIIVFDAGRIV AQGTHDALVAQGGLYARLARLQFTEGVAAE" gene complement(1828276..1829838) /locus_tag="SKA53_09284" CDS complement(1828276..1829838) /locus_tag="SKA53_09284" /note="COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases" /codon_start=1 /transl_table=11 /product="5'-nucleotidase" /db_xref="CDD:10605" /translation="MTLRLMTTSCALALIAGSAAADYTLHIIHTNDLHSRIEPISAFD STCNAEANAAGECFGGVARVITQINALRDELAGQNVVVVDAGDQYQGSLMYTTYKGEV EAEFMNVIGYDVMAVGNHEFDDGDAGLRKLTDLVSFPVISGNIDVAGSNILAGQVDNH VVLEIGGQRIGIISALASDTVETSSPSDAVIFTPEVASLSADVAALQDEGVTKIIALT HVGLSKDMEIAAAVDGIDAIVGGHSHTLMSNTEDGALAYPTMVGAVPVVQAYAYSKYV GHLTLVFDDAGNVTSATGDTILLDASVAEDEAAVARIAELAGPIEEMKTRIVAETAAA IDGDRSVCRAMECPMGSLIADAMLDRVRDQGVQIAIQNGGGIRASIDEGEVTMGEVLG VLPFQNTLSTFEVTGETLLQALENGVSQIEEGAGRFPQVAGMTFTVDSAAPAGERVSD VMVGAAPLDPAMVYAVVSNNYVRNGGDGYAMFEDAANAYDFGPDLADVLAEYMAAQGA FVPYTDGRITVN" gene 1829990..1830322 /locus_tag="SKA53_09289" CDS 1829990..1830322 /locus_tag="SKA53_09289" /note="COG3502 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24981" /translation="MLIYKIFRADEWAAFERDGATSGAPVDLADGYIHFSTAATVAET LTKYFTGETGLVLLAVAAEGLDPLKWEPARGGVLFPHLYRDLTLADVVWVRDLPLSDG AHVLPDLA" gene 1830319..1831371 /locus_tag="SKA53_09294" CDS 1830319..1831371 /locus_tag="SKA53_09294" /EC_number="1.3.3.1" /note="COG0167 Dihydroorotate dehydrogenase" /codon_start=1 /transl_table=11 /product="dihydroorotate dehydrogenase" /db_xref="CDD:25703" /translation="MKAIEQIGLSALRRIDPETAHGLAITALRAGLGPKIAPFTSPRL RSDVAGLSLPNPIGLAAGFDKNATALAPLARSGFGFVEVGAATPRPQPGNTKPRLFRL TADRAVINRFGFNNDGMQVIADRLAQRPADGVIGLNLGANKDSTDKAADFATVLAHCG PHVDFATVNVSSPNTEKLRDLQGKAALAALLAGVMETRAGMARAIPVFLKIAPDLTGE EIAEIAEVAQAAGIAGIIATNTTLDRTGLHGPHTQEKGGLSGQPLFEKSTRVLAQLSA LTDLPIIGVGGVATADQAYQKIRAGACAVQLYTALVYGGLSLVDDIARGLDALLLRDG FASLADAVGSGRADWT" gene complement(1831348..1832673) /locus_tag="SKA53_09299" CDS complement(1831348..1832673) /locus_tag="SKA53_09299" /note="COG0534 Na+-driven multidrug efflux pump" /codon_start=1 /transl_table=11 /product="DNA-damage-inducible protein F" /db_xref="CDD:10405" /translation="MADILTHRRVLRIALPIVLANATVPLLGLVDTGVVGQLGEAAPI GAVGLGAVILTAVYWVFGFLRMGTTGLAAQASGAGDMDEVAALLSRALLIGFGAGAVM IAAQWLIFDGAFRLAPASAEVEDLARDYMAIRIWSAPATIALYGITGWLIAQERTGGV LMIQLLMNGLNIGLDLVFVLGFDWGVAGVAWATFIAVWAGLALGLWYCRDAFAGVAWR TAARVFDLIRLRRMAVVNSDIMIRSVLVQAIFVSFLFYGAGFGDVPLAANQILIQFLY VTAYALDGFAFAAEALVGKAAGARARGVLRRAAIITSLWGLGACAIMAVCFALFGGIT IDIMTTAPEVRAAARTYLPYMVAAPLAGVAAWMLDGIFIGATRTTDMRNMMIVSAVVY FVSVIPLMALFGNHGLWIGMLISFVVRGVTLGLKYPALEAAASGPVRAA" gene complement(1832666..1833160) /locus_tag="SKA53_09304" CDS complement(1832666..1833160) /locus_tag="SKA53_09304" /note="COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11758" /translation="MNTRPEAVQVIKQRRDAMLQKLVARVPYMQFLGIQIDRRGDELT AILPYADRLIGNPMLPALHGGATAAFLEVTAIMELTWAMIWEDMEAGRITDDTPAITL PKTIDFTVDYLRSGLPRDAYARARVNRSGRRYASVHVETWQDNRARLFAQATGHFLMP PRDG" gene complement(1833157..1833597) /locus_tag="SKA53_09309" CDS complement(1833157..1833597) /locus_tag="SKA53_09309" /note="COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11758" /translation="MSDDQASRRDKIAAQFIASIPHAQALGMTLTEVGDGRATIAMDY DQRFIGDPDTGVIHGGAVSALMDTCAGAAVMAHPAAALATATLDLRIDYMRPATPGDR ITATAECYHVTRSVAFVRATAVDSDADRPVASATGAFTISRGKA" gene 1833724..1834092 /locus_tag="SKA53_09314" CDS 1833724..1834092 /locus_tag="SKA53_09314" /note="COG0789 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MerR family" /db_xref="CDD:27755" /translation="MTEKRLSFKEMCAKFDVTPRTLRYYEYIELLTPEKEGRARFYGP RELARMTLILRGRRFGFALEDIRQWLLIYEKEGTHAQMREWVALADRQMEELRQQRAQ LDETMAELQQLRDHTAKTLA" gene 1834264..1834665 /locus_tag="SKA53_09319" CDS 1834264..1834665 /locus_tag="SKA53_09319" /note="COG0789 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MerR family" /db_xref="CDD:27755" /translation="MTTDTMNIREMCETFEVTPRTLRFYEAKELLFPIRQGQKRLFTK RDRARLKLILRGKRFGFSLEEIRQLLDLYHMDDGQETQLSKTYELAERHLADMQAQKA ELDEAIGELKAQMAWGAEKLSSLAKKKSAAA" gene 1834709..1836487 /locus_tag="SKA53_09324" CDS 1834709..1836487 /locus_tag="SKA53_09324" /note="COG1960 Acyl-CoA dehydrogenases" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase family protein" /db_xref="CDD:27628" /translation="MPIYNAPVKDIQFVLHDLLKISEQDIAGFEDLERDFTGAVVEEA GKVATAVLHPLNAVGDREGCVLENGVVRTPAGFKDAFEQMKKGGWTAMDCDPAYGGQG LPYVMHTAAQEPFVSANMAFNMYQGLTHGAYSAIYAHGSDEQKQTYLPKLTTCEWTGT MNLTEPHCGTDLGLMRTKAVPQDDGSYKISGQKIFISAGDHDLAENIIHLVLAKIQGG PDGIKGVSLFIVPKIMVNDDGSLGARNGVSVGKIEEKMGIHGNATCVMNYDDATGFLV GEAHKGMRAMFTMMNEARLGVGLQGYAQAESAYQNAVAYANDRLQGRAVTGAENPDGP ADPLIVHPDIRRNLMDQKSFVEGARAFTYWGAYLIDRAHRNSDKDADGLISLMTPVIK GFLTDKGFEYATAAQQVYGGHGYIEEWGMSQYARDARIAMIYEGANGIQALDLVGRKL ALDGGKHVMAFFEMIKTFIKENEGNEALNKDFLVPLKAASKDLQAAGMYFMQNGMKNP NNALSGSYDFMHMMGHVCLGLMWARMAKAAMDALASGASDTEFYETKIATGRYYMARQ LPATAMHLARINTGADTVMALQAAHF" gene 1836831..1837460 /locus_tag="SKA53_09329" CDS 1836831..1837460 /locus_tag="SKA53_09329" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /db_xref="CDD:10495" /translation="MKLHCFAESGNAYKAALTLTLTDQDWEPVFVDFFNGATRSPEFR ALNVMGEVPVFEDGDLVLTQSAVIQDYISSKSGKLGGRSAAERRDVLRWMFFDNHKVS GVAGPLRFNMNFLPEAKRNADVNAFLAMRLASALKVMETHLTGRDWLAGEDMTIADIA CAGYLFYSEPFTFARTDYPQIDRWLDRISARPSWKHPYDLMPRGLTSAT" gene 1837473..1838684 /locus_tag="SKA53_09334" CDS 1837473..1838684 /locus_tag="SKA53_09334" /EC_number="2.3.1.9" /note="COG0183 Acetyl-CoA acetyltransferase" /codon_start=1 /transl_table=11 /product="acetyl-CoA acetyltransferase" /db_xref="CDD:27979" /translation="MTDAYIYDAIRTPRGKGRADGSLHEVTSARLSAGVLNALKERNN LEGHAVEDVIWGNVTQVGEQGGCLARTAVLASDLDQSIPGLAINRFCASGMEAVNLAA NQVRGGAGQAYIAGGVEMMGRVPMGSDGAAIAVDPSIAMDSYFVPQGISADIIATEYG FTRDEADQLAVASQQRAKAAWDDGRFAKSVVTVRDINGLAILDHDEYMRPETNMQTLG SLNPAFQAMGEVMPGFDKIALMKYPHLERINHIHHAGNSSGIVDGAAGVLVASKEWGE AMGLKPRAVIRATAKIGTDPTIMLTGPVPVTEKILRDSGMAISDIDLFEVNEAFASVV LRFMQAFNVDHDRVNVNGGSIAMGHPLGATGAIIIGTLLDELERTGKSTGLATLCIAS GMGAATIIERV" gene 1838695..1840893 /locus_tag="SKA53_09339" CDS 1838695..1840893 /locus_tag="SKA53_09339" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /3-hydroxybutyryl-CoA epimerase" /db_xref="CDD:10967" /translation="MTDFTLKTDADGVAIITWDTVGKSMNVMNQQGFTDLDALVGHAL ADDAVKGIIITSGKPDSFAGGMDLNIIARMKDSAGDDPARGLFDGVMAMHGVLRRIER AGMDPKTNKGGKPIAAALPGTALGIGLEIPLACHRIFAADNPKAKIGLPEIMVGIFPG AGGTTRLARKLGAMGASPLLLEGKLNDPQAAKRAGVIDEVVPAEDLISAAKAWVLSNP AIVKPWDEKGYKMPGGAPYHPAGFMTFVGASAMVNGKTMGVYPAAKALLSAVYEGALV PFDTALKIEARWFTNVLMNPSSSAMIRSLFINKEALEKGANRPQAPDQKVRQVGVIGA GMMGAGIALVSALAGIKVVLIDAKQDAAEKGKSYTAAYMDKGIARKKATEDKKAAVLG LIHATTDYAALKDCDLIVEAVFEDVGVKAEVTKKVQAVTGAGCIFATNTSTLPITELA KASNDPTNFIGIHFFSPVDKMMLVEIIKGEATGDVAVAKALDFVRQIRKTPIVVNDAR FFYANRCIIPYINEGIRMVREGVEPALIENAAKLVGMPLGPLQLVDETSIDLGVKIAK ATRAAMGDAYPDGVVDEVLFWMADQTRLGRKSNAGFYAYDDKGKRTGLWDGLAVQYPV ADQQPDLVTVQHRLLFAQVLEAVRALEDGVLTDIREGDVGAILGWGFAPWSGGPFSWL DIIGAPYAAERCDQLTAQFGDRFTTPDLLRDMAAKGHEFYKRFGTGAKAA" gene complement(1840933..1841844) /locus_tag="SKA53_09344" CDS complement(1840933..1841844) /locus_tag="SKA53_09344" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="possible transporter, DME family, DMT superfamily" /translation="MTPQLALPDQIVSSHAALYIIVGMATLGLSDNFVPHVAADGSLW QFHLLRGTLALGALCLIALLGRGSLRPKRPWAVFGRSVFQAGSMLIYFGCLAILPIGI VVAGLFTSPIFVLLIAVIFQGKRVGWGRSLAIITGFAGALLVIRPDPAALDLVVFLPI LAGLLYAIGAIATRAWCEGETTLTLSAGFFAMLAVFGAFGCLLLPSTGTGAEGFAQRG WMPVTADLAFWIAVQAALALVGIFCLFRGYQLGEASQVAVYEYSLLIFASGWAWYLWG DLVSPVAMAGMALIALAGIIIVSRRST" gene 1841937..1843562 /locus_tag="SKA53_09349" CDS 1841937..1843562 /locus_tag="SKA53_09349" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="AMP-binding protein" /db_xref="CDD:10192" /translation="MGWMRDETGLGKRAANHVPLTPLSHLQRAGLVFANREALVYGTA RLTYAQYHRRVTRLASALVKAGVQPGDVVATILPNIPAQSEAAFGVPACGAVLNTINI RLDVDTIAYILDHGEAKVVLVDSQFLPQAMAAIDQMQGPTPLVIEVPDDHAGILTTGT QQNYEDFLATGDPDFAWILPHDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTLGTAI SWEMPTFVRYLQIVPLFHCNGWNHTWMLPALGGTAICCRDITASTIYDAIADHGATHF GGAPIVLNLLVNAKPEHRRQFDHMVQVFTAGAPPAPATLAAIGKLGFHVKQVYGLTET FGHVTECIWDPAWDTLPEAEQAAIKARQGVGFPIMEDVTVVNDQMEPVPWDGTTQGEI VMRGNAVMKGYLKNPDATERAFAGGYFHSEDLAIQHPDGMIQISDRAKDIIISGGENI SSVEVEAALMHHAAVNLCAVVAQSDEKWGEIPCAFVELKDGATATEAEIIAFARERLA GFKCPKRVVFQDLPKTSTGKIQKFELRLIVKAF" gene 1843645..1844661 /locus_tag="SKA53_09354" CDS 1843645..1844661 /locus_tag="SKA53_09354" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTALDRYVRLESDGLWRPAPDQQRRQVTISFGDATLVIADGAAR PLAHWSLPAVIRLNPDERPAIYAPDQEASEALEIADEIMIDAIEEVRKSLAKSRPQPG KLRHWITAGIVAATLALAVFWLPGALMRQTLAVVPNAKRVEIGAIILAHVQTKTGAVC RDTTAQAAAGTLATRVFGAGTPLNIVVVPKLDQGALAMPGGLIILDAGLLQAADDPVA VAGFVLASHVALGNHDSLEPVLRQAGLATTFGLLTTGDIPRDVLQRHTEAVLDQPAPQ ADPADLRRAFAAANLPQRPYQVLADARSGTMPDLGRDTLDGQPSPPVMTDSAWISLQN ICNR" gene complement(1844665..1845297) /locus_tag="SKA53_09359" CDS complement(1844665..1845297) /locus_tag="SKA53_09359" /note="COG0035 Uracil phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="uracil phosphoribosyltransferase" /db_xref="CDD:9910" /translation="MNDHVTHVTHPLVQHKLTLMRQRETSTALFRQLLREISQLLAYE VTRGLPMTTRRIDTPLEPMDAPVIDGKKLALVSILRAGNGLLDGVLELIPSARVGFVG LYRDEETLQPVQYYFKVPTELEDRLVIAVDPMLATGNSSVAAIDLLKQAGATNIRFLC LLAAPEGIARMRAAHPDVPIVTAAIDSHLNDRGYIVPGLGDAGDRMFGTK" gene complement(1845294..1846283) /locus_tag="SKA53_09364" CDS complement(1845294..1846283) /locus_tag="SKA53_09364" /EC_number="3.5.4.4" /note="COG1816 Adenosine deaminase" /codon_start=1 /transl_table=11 /product="adenosine deaminase" /db_xref="CDD:28181" /translation="MSFQTLPKIELHTHLEGCAPPDFIRMLAAEKKIDISGIFTPAGG YDFRDFDHFLKVYEAACTTLQTPDDFRRLTLAVLEETAQHGVVYMETFVSPDFCGGGD LVAWKDYLAAMSDAAAEGEARFGITMRGIVTGIRHFGPDACKPAARCAAETFGGFVVG YGMAGGELAGRPADYAYSFDIAREAGLPLTCHAGEWGGAAMVAETIRDLKVARIGHGI GAIDDPALLREIVDKDIVLEVCPGSNVVLKAVTDWASHPIARLRDAGVKVTVSTDDPP FFHTTMTAECDLLHRTFGWDAADFAALNQTALTAAFCDDATRARVAKRLEPAQ" gene complement(1846280..1847455) /locus_tag="SKA53_09369" CDS complement(1846280..1847455) /locus_tag="SKA53_09369" /EC_number="5.4.2.7" /note="COG1015 Phosphopentomutase" /codon_start=1 /transl_table=11 /product="phosphopentomutase" /db_xref="CDD:10744" /translation="MARAILIVIDSVGIGGAPDAAQYFNGDLPDTGANTLGHIAKAVP LRLPHLDALGLGASVQLASGSEVPGLGAVPTGAWGAATEVSRGKDTPSGHWELAGVPV PWDWHHFPDTTPAFPPDLTAQICKAAGTGGILGNCHASGTAIIDREGAAHLRHGWPIC YTSADSVLQIAAHEDHFGLDRLYQLCADLAPTLHAMKVGRVIARPFMGEVGAFTRTAN RKDYAIPLPGPSICDDVQAAGGKVHAVGKIGDIFSMQGIDTLYKGKDAVLMDHISDLL DTADDGDFIFANLVEFDSDYGHRRDVAGYAAHLAWFDAALGALLARLAKDDLLIVTAD HGNDPTWPGTDHTRERVPVLVHGIGDGPLGHLAFSDVAASIADHLSVPYRGAGKSFL" gene complement(1847455..1848756) /locus_tag="SKA53_09374" CDS complement(1847455..1848756) /locus_tag="SKA53_09374" /EC_number="2.4.2.4" /note="COG0213 Thymidine phosphorylase" /codon_start=1 /transl_table=11 /product="thymidine phosphorylase" /db_xref="CDD:10088" /translation="MDARAIIAAIRNRQTPDAEALGWFAQGLANGSVSDAQAGAFAMA VCLNGLSDQGSVALTRAMRDSGDVLSWDLPGPVLDKHSTGGVGDCVSLIAAPVLAACG AYVPMISGRGLGHTGGTLDKLEAIPGLSTQVTEQHLRQITREVGCAIVSATGQIAPAD RRLYAIRDVTATVDSIDLITASILSKKLAAGLDGLILDVKCGSGAFMKTPDDARALAQ ALVSAANGAGCRTAALITDMNAPLAPALGNAVEVAVCMEVLEGNSAAAPRLAELTKAL CVHLLTLQGRSAPEASAQVALALSSGEAMERFARMIAAMGGPPDMAEDWRTHLPAAPI MGEVTAPDSGHITAIDGEALGLVVVGLGGGRRIETDRINPSVGLTDMIGLGASVTRGQ PLCTLHAATEEAAIDAARAVRAAITIGAAAVPGALVLERIG" gene complement(1848760..1849200) /locus_tag="SKA53_09379" CDS complement(1848760..1849200) /locus_tag="SKA53_09379" /note="COG0295 Cytidine deaminase" /codon_start=1 /transl_table=11 /product="Cytidine deaminase" /db_xref="CDD:10169" /translation="MRRRPHQSDLTQPEVFMSLIDNARAVRENAYAPYSKFKVGAAIR SASGTIYTGCNVENVAYPEGTCAEAGAIAAMIAGGDTRIAEVAVIADSPKPVSPCGGC RQKIAEFAHGDVAVTLATMDGIVQRTTVADLLPGSFDADYMSRV" gene complement(1849223..1850290) /locus_tag="SKA53_09384" CDS complement(1849223..1850290) /locus_tag="SKA53_09384" /note="COG0662 Mannose-6-phosphate isomerase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11626" /translation="MTHLHEIRAEICLPTTDLRADLAFFGKVLGMRLDMIYPADDPSV AVYSGHGLRVRLEQGAGVNPGLRILTDDPAFADGQTDLTSPGGTLVSVHPLNPPLVLP RTDHAFVVRRLADQAPWVIGRAGMQYRDLIPTRLGGSIIASHIRIPDGGPVPDMVHFH KVGFQLIFCIKGWVDVVYEDQGGPIRLTAGDCFIQPPEIRHRVLEASDGIEVIEIGVP AEHVTEIDHDMTLPTPHLRPDREWQGQKFVYNKAADADWQPAHLPGYIARDTTIAANT KGVAGVHVIRRGTGDPEWTAHEADIHFTFVMAGEMLLEGEGKDPYVLTAGDAFVIPPG MRTRYAKPSDDLELLEVTLPG" gene 1850405..1852696 /locus_tag="SKA53_09389" CDS 1850405..1852696 /locus_tag="SKA53_09389" /EC_number="2.3.1.8" /note="COG0281 Malic enzyme" /codon_start=1 /transl_table=11 /product="phosphate acetyltransferase" /db_xref="CDD:10155" /translation="MEMMMVDETANSQRQAALDYHKYPKPGKLEIRATKPLANGRDLA RAYSPGVAEACLEIKADPDTARDYTARGNLVAVVTNGTAVLGLGNIGALASKPVMEGK AVLFKKFANIDCFDIELNESDPYKLADIVCALEPTFGAINLEDIKAPDCFIVEKLCRE RMNIPVFHDDQHGTAIVVGAAAVNALHVAGKKFEDIKIVSTGGGAAGIACLNMLLKLG VKRENVWLCDIEGLVYHGREKDMSPQKAEYAQGTVPATLADVIGGADLFLGLSGPGVL KPEMVARMAARPIIFALANPNPEIDPDAARAVTPDAIIATGRSDYPNQVNNVLCFPFI FRGALDAGATEINDEMKIACIEGIAALARATTSAEAAAAYSGEKLTFGADYLIPKPFD PRLMGVVACAVAKAAMETGVALRPIADLKAYKEKLDGSVFKSAMIMRPVFEAARTASR RIVFAEGEDERVLRAAQAVMEDTTETPILIGRPDVIESRCERAGLKIRPGVDFNVVNP ENDPRYRDYWETYHGLMARRGVTPDLAKAIMRTNTTAIGAVMVQRGEADSLICGTFGQ FLWHLKYITEILGTPALHPVGALSLMILEDGPLFIADTQVHPEPTPAQIAESVIGAAR HVRRFGLEPKIALCSHSQFGNLDCDTGRRMRAAMAILDSAPRDFAYEGEMHIDSALDV DLRSRIFPGAHLPGPANTLIFANTDAASGVRNILKMKGGGLEVGPILMGMGNRCHIVT PSITARGLLNMSAIAGTPVAHYG" gene 1852689..1853486 /locus_tag="SKA53_09394" CDS 1852689..1853486 /locus_tag="SKA53_09394" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MADMTPVFLCFKWGKGYPCRYTNILFRALCDQMQTPFRLVCLTD DPEGLAEGIETMPLPAFAMDRKDWQNGMWPKLSAFAPGLLAPGTPVIMMDVDVVVLRD LTPLFDQLRAKGGLHIIREIPDTLPRWFPSVFGKPLLSNSSVVGFIAGTQDHLFEMFR DKSFAQVQHFHNDQDFIHHHAHDRQHWPIGWMISFKKDCVFHFPVNLVRPIRRPNAFV VIFHGTPNPEDMVQGPFKRWGSPEKFGYFPVRWIKDYWTRYSRPTDR" gene 1853676..1855568 /locus_tag="SKA53_09399" CDS 1853676..1855568 /locus_tag="SKA53_09399" /note="COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases" /codon_start=1 /transl_table=11 /product="propionate--CoA ligase" /db_xref="CDD:10239" /translation="MGYAEVYAGWQKDPEGFWMEQAKAIDWVTPPSKALNDSTAPIYS WFADSQVNTCYNAVDRHVAAGRGDQAAIIYDSPVTDTKRTITYAQLLNNVSSLAGALR AKGIAKGDRVLIYMPMVPEALEAMLACARLGAVHSVVFGGFAAHELAVRINDATPKAI IAGSCGIEPGRVVKYKPLLDAAIAEATHKPDFCVILQREQGPADLIPGRDHDWHEVQQ GVTPTECVPVEGDHPAYILYTSGTTGAPKGVVRATAGHLVALNWTMKAIYNVDPGDVF WAASDVGWVVGHSYICYAPLIHGNTTVVFEGKPIGTPDAGTFWRVIEEHNVRSFFTAP TAFRAIKREDPKGEMIKSYDISCLRALYLAGERADPDTIVWAQNVMKVPVYDHWWQTE TGWTIAGNPVGIEALPVKIGSPTVPMPGYDVRILDEAGHPVAPGTLGAIAIKLPLPPG TLPTLWNAEDRFLKSYLTTFPGYYETGDAGMIDADGYLYIMARTDDVINVAGHRLSTG AMEEVLANHPDVGECAVIGVADELKGQLPLGFVCLNKGCNKPHDEIVKEVISAVRDTI GPVAAFKLVAVVDRLPKTRSGKILRATMVKIADGQDFKMPATIDDPAILDEIRAALQP LGYAKT" gene 1855662..1856969 /locus_tag="SKA53_09404" CDS 1855662..1856969 /locus_tag="SKA53_09404" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="putative oxidoreductase protein" /db_xref="CDD:10534" /translation="MPIETFAPAGETKHTTSYYAASANPSPERPKLQGDQLIDICVVG AGYSGLSAALHLAEKGFKVAIIEGARVGWGASGRNGGQIVNGLNASLQTIKRRYGQDT ANFVAGLVQEGGEIIRERVATYDIQCDLKHGNIFTGLTAAHMRELDERRTLWASYGLH NQDMLSKSELRDHIGSDVYAGGMIDHTGGHMHPLNLCLGEAAAFEKLGGVIYEQSPVI SCDTEADKPVVRTREGTMTCNTLLLCGNAYLGHVVPALTARVMPVSTQMMATVPLGDK ADELLPTDKCVEDVRYILDYFRLSADKRLIFGGGTVYGGTDPADVVAKLRPAMEKVYP QLKGVKIEHAWSGNFALSFSRVPQMGRLGNNTYFAHGYSGHGVTGSHTFGRILSEAVA GDRARFDVFAKVPWYPFPGGRMFRVPYSMMGSWYYALRDRLGV" gene complement(1858096..1858860) /locus_tag="SKA53_09409" CDS complement(1858096..1858860) /locus_tag="SKA53_09409" /note="COG0061 Predicted sugar kinase" /codon_start=1 /transl_table=11 /product="probable inorganic polyphosphate/ATP-NAD kinase" /db_xref="CDD:9936" /translation="MSPVKIAFVASAMPAAQSALRALAQAYGDVPQAKADVIVALGGD GFMLQTLHATQGLDVPVYGMNRGTVGFLMNEYHDTDLPARLAVAEEEVINPLHMTALT VDGAMQEALAINEVSLLRAGPQAAKLRITVDGKLRMPELVCDGALLATPAGSTAYNYS AHGPILPIGSDVLTLTAMAAFRPRRWRGALLPKKAVVRFDVIDPAKRPVMADADGKSV RDVVSVEIRSEPGIRHRILFDPGHGLEERLIREQFA" gene 1858933..1858998 /locus_tag="SKA53_09414" CDS 1858933..1858998 /locus_tag="SKA53_09414" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MHDALIKIMVVLMLQMLGFLG" gene 1859037..1860341 /locus_tag="SKA53_09419" CDS 1859037..1860341 /locus_tag="SKA53_09419" /note="COG0112 Glycine/serine hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="serine hydroxymethyltransferase" /db_xref="CDD:9987" /translation="MHPMNITIRDQGFFTETLATRDPVLHAAMQAELKRQRKEIELIA SENIVSAAVMEAQGGVMTNKYAEGYPGRRYYGGCEHVDVAENLAIERACQLFDCAYVN VQPNSGSQANQGVFQALLQPGDTILGMSLDAGGHLTHGAKPNQSGKWFNAIQYGVRRQ DNLLDYDEVARLATEHQPKMIIAGGSAIPRIIDFAKMREIADSVGAYLLVDMAHFAGL VAAGLYPSPFPHAHVATTTTHKTLRGPRGGMILTNDEDLAKKFNSAIFPGIQGGPLMH VIAGKAVAFGEALRPEFKTYQAQVIKNAQALADQLMKGGLDIVTGGTDTHVMLVDLRP KGVKGNATEKALGRAHITCNKNGIPFDPEKPMVTSGIRLGTPAGTTRGFGEAEFRQIG DWIVEVTEGLAANGEDGNGDVEAKVRSEVEAMCDRFPIYTNL" gene complement(1860381..1860749) /locus_tag="SKA53_09424" CDS complement(1860381..1860749) /locus_tag="SKA53_09424" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAPDIHKQVAEISALLRQKLGLRARTFQAQVHKARRFLPRALRR DLIYLAQAESLADNPKLQRMIDMPRLDAAHRNALAYLDQIDMKQRRWTAALNVAASIA FGLLLTAILVIVVLVQRGLV" gene 1860828..1861565 /locus_tag="SKA53_09429" CDS 1860828..1861565 /locus_tag="SKA53_09429" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="Esterase/lipase/thioesterase" /db_xref="CDD:10466" /translation="MLNTVLHDGPGAVPLLIAHGLFGSARNWGVIAKKLSETRPVITV DMRNHADSPWFDSHSYPDMAADLAQVMDRPMDVLGHSMGGKAAMVLAVQRPDLVRKLI VGDIAPVAYTHDQHGPIAAMRRVRLDAVANRGEAKAQLGDLEPGVADFLLQSLDMKDK CWRLNLDVLQAEMDNIIGFPQLDGQFTGPTLFLSGAKSDYVTAAHRAPVKALFPNARF AKIPDAGHWLHAEQPRAFIGSVAAFLG" gene 1861625..1861744 /locus_tag="SKA53_09434" CDS 1861625..1861744 /locus_tag="SKA53_09434" /note="COG5510 Predicted small secreted protein" /codon_start=1 /transl_table=11 /product="GTP-binding protein LepA" /db_xref="CDD:14594" /translation="MPMIRLLALVAILGLSACNTVQGVGRDITSAGQAVENAF" gene complement(1861746..1861841) /locus_tag="SKA53_09439" CDS complement(1861746..1861841) /locus_tag="SKA53_09439" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MEVTMHYLPHGFAMFLGGACLAVVWTSAQLW" gene 1863286..1863579 /locus_tag="SKA53_09444" CDS 1863286..1863579 /locus_tag="SKA53_09444" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMRRLAEVLIIDAYTFRSADDLIRDGDGNLKMMNGLLNEIKSGR TFKLSRNAPKFLEDLKLLGDTAAHSRNYITKKRDIDEFSLKFRMLIEELINLS" gene complement(1863576..1865375) /locus_tag="SKA53_09449" CDS complement(1863576..1865375) /locus_tag="SKA53_09449" /note="COG0481 Membrane GTPase LepA" /codon_start=1 /transl_table=11 /product="GTP-binding protein LepA" /db_xref="CDD:10354" /translation="MTDLSHIRNFSIVAHIDHGKSTLADRLIQSTNTVAARDMKEQML DSMDIERERGITIKANTVRIDYTADNGRAYVLNLIDTPGHVDFAYEVSRSMRAVEGSL LVVDSTQGVEAQTLANVYHALDAGHEIVPVLNKIDLPASECDQVAAQIEDVIGLDASG AIRVSAKTGIGIHETLEAIVNLLPAPQGDRDAPLKAMLVDSWYDSYLGVIVLVRIIDG TMKKNDRVRFMSNGTVHQIDKIGVFRPKMQDVEILGPGEIGFITASIKQVRDTRVGDT ITSEKKGTDQALPGFKPAQPVVFCGLFPVDSSLFEDLRDAIEKLALNDASFSFEMETS AALGFGFRCGFLGLLHLEVIRDRIEREYDIDLITTAPSVVYHLHMRDGEMRELHNPAD MPDLTLIDHLEEPRIKATILVPDEYLGDVLKLCQDRRGVQLDLTYAGSRAMVVYDLPL NEVVFDFYDRLKSVTKGYASFDYVLTGYQEDYLVKMSVLVNDEPVDALSMMVHRDRAE MRGRAMVEKLKDLIPRHMFKIPIQAAIGGKVIARETLSALRKDVTAKCYGGDATRKRK LLDKQKAGKKKMRQFGKVDIPQEAFISALKMDG" gene 1865474..1865869 /locus_tag="SKA53_09454" CDS 1865474..1865869 /locus_tag="SKA53_09454" /note="COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit" /codon_start=1 /transl_table=11 /product="arginine/ornithine transport system ATPase" /translation="MPRLTLHIAPEHGRAILQDAKKTEGRMRIFLVMGAVATLAACGG GRVSGDISAACMNAGRVAASPQLCSCVQQVANQSLSDRDQARAAAFFADPQRAQDTRQ SDNRSDEAFWLRYRAFADLATQVCRPVAV" gene 1865915..1866910 /locus_tag="SKA53_09459" CDS 1865915..1866910 /locus_tag="SKA53_09459" /note="COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family" /codon_start=1 /transl_table=11 /product="ATPase" /db_xref="CDD:11414" /translation="MTRNPAPDDLAQRIRAGDRRALAKGITLVESGRADDRVAAIALL TALGTDRQALRIGLSGTPGVGKSTFIESFGLMLTGQGKRVAVLAVDPSSARSGGSILG DKTRMDYLARDPLAFIRPSPSQTQLGGVARRTREAVALCEAAGFDIVLIETVGVGQSE TMVAQMADLFVLLLAPAGGDELQGVKRGIMEMADLILVNKADGDLKSQAMRTCADYAG ALRLLRKRPQDPEDFPKAMTVSALEQHGLAAAWDDMQHLANWRRDTGIWDEVRLAQVS YWFTEDVRQGLVQLLESDPALQDAMTTAKAQVLSGKLAPSVAAAQVLAALKGLAP" gene 1866907..1867644 /locus_tag="SKA53_09464" CDS 1866907..1867644 /locus_tag="SKA53_09464" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKPLFDGDHLRATLYDRGHDKLIITFDFRSPGKRDFGKDQPSAA FARKGFAVLRVKTRRNDWFINSETAALEDSLRRIADDYDWINLLGYSMGGYAAFRFGS CIAANAIVAVSPQFSITPDIAPFDPRYWPDSTGFDPVIGDLASRLRPDQKGLILVDPF SKPDLMHAQLITAYAPCVRLARLAGGGHPATKVLAEAGQGQIIRTVATTFAPDPRPII TAHRAARAGSRQYLNRLTRARRQRGRE" gene complement(1867690..1867800) /locus_tag="SKA53_09469" CDS complement(1867690..1867800) /locus_tag="SKA53_09469" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGVFLVLRDIAGQTGGTSCIRVRSPAQAEQIIIGGD" gene 1867799..1868086 /locus_tag="SKA53_09474" CDS 1867799..1868086 /locus_tag="SKA53_09474" /note="COG0227 Ribosomal protein L28" /codon_start=1 /transl_table=11 /product="ribosomal protein L28" /db_xref="CDD:10102" /translation="MSRRCELTGKGPMSGNNVSHAKNHTRRRFLPNLQDVTLQSDVLG RSFKLKISNAALRTVDHRGGLDAFMAKAKEAELSPDALKIKKEIAKATAAA" gene 1868193..1870598 /locus_tag="SKA53_09479" CDS 1868193..1870598 /locus_tag="SKA53_09479" /note="COG1643 HrpA-like helicases" /codon_start=1 /transl_table=11 /product="ATP-dependent helicase HrpB" /db_xref="CDD:11354" /translation="MTDLPIDIILPDLVAALGQHGRAVLQAPPGAGKTTRVPLAMLKA GLTRGKIIMLEPRRLAARAAAERLAETLGEQPGQTVGYRMRGESQPGSRIEVVTEGIL TRMIQSDPALTDVGAVIFDEFHERSLNADLGLALAWESRAVLRPDLILLVMSATLDAA PVAAMLDDAPVITSRGQSYPVTTHFLDTALPKTIRLPQATADLVVRAVQETKGGVLVF LPGEGEIRATMAALSGRLPDGCVIRPLYGALPFKDQRAALAPVTTGRKIVLSTSIAET SLTIPDIRVVVDAGRARRARFDPGSGMSRLVTERVSRAEATQRAGRAGRVAPGDAYKL WTKGEDGALPAFAPAEIEAADLAGLALELAVWGSDDLAFLTPPSPAALAEARALLQNL GALDGNLRITAHGRALAALPLHPRLGHMLQTAGAQAAPLAALLAARDPLRGAPVDLAL RIHALQGRYDGPGQVNHAALTQIKPEIARLARGLPKTAPMTLAEQAALAYPDRIGLRR KGDAPRYLLSGGKGAIIDSADPLAGQRLIVATDLDGDKLEARVRQATTITEAELRGLF ADRIGWHDLCQWSRRDGKVLSRRQEMFGALVLDDRVWSDAPAIAVARAMLDGVRQLGL QFSAAAKRFQARVALVDGLPAMDDATLLATLEDWLLPDLAGVRSAEDWKRFDPLPALR AMLDWDQMQRLDTAAPASFETPLGRKIPIDYDDATPAITLRLQEMFGTTRHPMVGRIP LRITLLSPGQKPVQVTQDIVGFWATSYADVRRDMRGRYPRHPWPEDPTEADPTLRTKQ RGT" gene complement(1870691..1871596) /locus_tag="SKA53_09484" CDS complement(1870691..1871596) /locus_tag="SKA53_09484" /EC_number="2.1.3.3" /note="COG0078 Ornithine carbamoyltransferase" /codon_start=1 /transl_table=11 /product="ornithine carbamoyltransferase" /db_xref="CDD:9953" /translation="MNHFLDIHVTPADDLSAIIANARRMKDARDGLPKGTPDAEQPLA GQMVALIFEKPSTRTRVSFDVGVRQMGGQTMVLSGTDMQLGHGETIADTARVLSRYVD LIMIRTFEEQTLLDMAEYASVPVINGLTNRTHPCQIMADIMTFEEHNGPIKGKKVVWS GDGNNVFASFAHAAKQFDFDLVFTGPPPLDPDPALDGLYTIMRNPNEAVQGADLVVTD TWVSMHDPQSARERRHNQLRGYQVNDALMAKAKPDALFMHCLPAHREDEATSSVMDGP HSVIFDEAENRLHAQKAIMRYCLGR" gene complement(1871647..1871820) /locus_tag="SKA53_09489" CDS complement(1871647..1871820) /locus_tag="SKA53_09489" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRMPQTDSGGSAVVPSLVYATVNNCDLPAGDLCQGVAGNTTAGA ADRWQIGAWQMHL" gene complement(1871820..1873004) /locus_tag="SKA53_09494" CDS complement(1871820..1873004) /locus_tag="SKA53_09494" /note="COG4992 Ornithine/acetylornithine aminotransferase" /codon_start=1 /transl_table=11 /product="acetylornithine aminotransferase" /db_xref="CDD:14122" /translation="MIASVLPTYSRAPLTFTSGSGAWLTEADGRRFLDLGAGIAVNAL GHAHPALVAALTAQAQSLWHVSNLYHIPAQQKLADLLVEHTFADTVFFTNSGTEACEL AVKMARKYWYDKGQPDRTEIITFTGSFHGRSSAGIAAAGSEKMTKGFGPLLPGFTHLD FGDHDALTLAAARDNIAAIMVEPVQGEGGIRPLPDVCLKGLRDLCDRHGILMILDEVQ CGMGRTGKLFAHEWAGITPDIMMVAKGIGGGFPLGAVLANENAASGMSAGTHGSTYGG NPLACAVGCAVMEIVADPAFLAEVNRKAGLLRQKLEGLVAAHPDVFVAVRGSGLMLGL KCKATNTDIVKAGYDQGVLTVPAADNVIRLLPPLTITDEEIGQAVARLDAVALHMQSE DA" gene 1873216..1874202 /locus_tag="SKA53_09499" CDS 1873216..1874202 /locus_tag="SKA53_09499" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:10566" /translation="MLKNEAQHLQIVIATPCERLCRLSLAGRRITYPCMTLRAPNPPL AIALILTATAFIAGTMILAKLLGTGVLGAPLHPLQVSHGRFLFAFLTLCALAAVLRPH IRQPDLRLHIGRTAFGWGGVTLMFAAVAFMPLSDATAISFLNPVFGMLLAIPLLGEKV GPWRWVAAATALIGALVLLRPGPETFQIAGLLALGAAVLMGIELIFIKKLANREPPFQ ILLVNNAIGLCIATLAVLPVWTMPTAGQWAALAGIGVLMASAQTCFVNAMARADASFV TPFSYLTLVFAAVYDGVIFGVVPDRISVLGAVIILSGATLLALRERKNKNSP" gene 1874256..1874669 /locus_tag="SKA53_09504" CDS 1874256..1874669 /locus_tag="SKA53_09504" /note="COG0515 Serine/threonine protein kinase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25910" /translation="MNEVYEYRRARGKGLIWLSGMGVVLLLAAISVANAPDLIWLVWA LGMLTFALMLVPRPVTGIRVDDVYLVLSAWHRPRALALDKIAYLRATQTDPETAAIII CKDGTEEKILSRDMPDLETLVAVMAARGIAVRDIY" gene complement(1874674..1875468) /locus_tag="SKA53_09509" CDS complement(1874674..1875468) /locus_tag="SKA53_09509" /note="COG0842 ABC-type multidrug transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein" /db_xref="CDD:11393" /translation="MNEMGVRRFGRVNWLGAWTLMIREIRRFVNVWLQTVMAPLINAG LLLMIFTIAIGSQRGDVMGVDFMTFLAPGILTMTVIQNAFANSSSSLVSAKVQGNIVD TLMPPLSAAELVAGYIGGAVARGLLVGVVIAAGSFLFLDVGLVHAGWAVTFILLGSIL MGGLGIIAGIYANKFDQLSAITNFLVTPLAFLSGTFYSIDALPPFMQTLSHANPFFYI IDGVRFGMIGVSDSSPWTGLWVVTGSCIVVLAICHRWMRSGYRLKA" gene 1875748..1876410 /locus_tag="SKA53_09514" CDS 1875748..1876410 /locus_tag="SKA53_09514" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAWRDPKGCLARETEGSHMSWTDERVETLKKMWGDGQSASQIAK ELGGVTRNAVIGKVHRLGLSNRAGTGTAVPAAKPALKEKPSETVEAPSAKPVSKPAPK AKPSMAVAIKEELELDENGIPISAARRAIIPAGQPLPPQPSANEISPEALAKVNEVEK TAKRLTLMELTEKTCKWPVGDPATEDFWFCGLPVQQGKPYCEAHVGVAFQPMSARRDR RR" gene 1876474..1877862 /locus_tag="SKA53_09519" CDS 1876474..1877862 /locus_tag="SKA53_09519" /note="COG0621 2-methylthioadenine synthetase" /codon_start=1 /transl_table=11 /product="RNA modification enzyme, MiaB-family" /db_xref="CDD:10491" /translation="MTQNPPSLRPDLARAQVTDTRRDGQPTIGMVSLGCPKALVDSER ILTRLRAEGYAISADYAGAEAVIVNTCGFLDSAKAESLDAIGEALRENGKVIVTGCLG AEPDYIREHHPHILAVTGPHQYEQVLDAVHLAVPPSPDPFIDLLPATGVSLTPRHYSY LKISEGCNHKCKFCIIPDMRGLLNSRPAHAVLREAEKLVQAGVRELLVISQDTSAYGL DRKYDLNPWKDGQVRSHITDLTRELGQLGAWVRLHYVYPYPHVRDLIPLMADPANGVL PYLDIPFQHSHPDVLRRMARPAAGAKTLDEIAAWRAICPDITLRSTFIVGYPGETEAE FQHLLDWLDAAQLDRVGCFQYENVAGARSNTLPDHVPAEVKQDRWDRFMAKAQAISAA KLAAKVGKRLEVIVDDIDEDGIATCRTWADAPEIDGNLFIDEGTEALSVGDIVQVVVD EAGEYDLWGGLA" gene 1877946..1879010 /locus_tag="SKA53_09524" CDS 1877946..1879010 /locus_tag="SKA53_09524" /note="COG4748 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="Putative restriction endonuclease or methylase" /db_xref="CDD:13888" /translation="MQFAEKIKELSKRSVIAASKALTEEATKTSVVLPFIQALGFDPF NLDEVVPEFISDVGLKKGEKVDFALKIDGKTTILIEVKPITMTLGSAQFSQLFRYFHT TESKVAILTNGKEAWFFSDIDDTNKMDKKPFFTFDFQNHDEKAIEELARFQKDIFSIE NILEAASALKYKSKAAQYLKSQLDEPDDDFIKVVGRKIHDGMLTKAIVEQLRPAIQSA LDVIIKDRIQDKLGIAFRPEAQPSTKATASEEETETEQSEIVTTEEEVQAFLIVKAIA ARSVAIDRITIRDSKTYCSVFVDNNNRKPLVRFYFNAKSKNVLGIFDPDKVEQKFEME HLGQIYDHADQILQTAASYS" gene complement(1879064..1879288) /locus_tag="SKA53_09529" CDS complement(1879064..1879288) /locus_tag="SKA53_09529" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLIVLALAMLPAAAFAQETTLPTAAEPVAQSCPAGMTFNAATQ SCGLTPAQTPTPAASDGFGCSFSAAREVTS" gene complement(1879378..1879644) /locus_tag="SKA53_09534" CDS complement(1879378..1879644) /locus_tag="SKA53_09534" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMQTLGDMREHFLRVVKMSGACGVNLSAALDEGQIDAPEYADMV TRCRGCAQVGKCDKLLATRPVLPEAPAYCENRDEFAQLRDVQAV" gene complement(1879709..1880245) /locus_tag="SKA53_09539" CDS complement(1879709..1880245) /locus_tag="SKA53_09539" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLSYLAFAFAVLPAAAFCAGSDDPAPPKPTETTTVCADGLVWD LATKSCMSPADSTNDDNARLNDVRELAYAGYYQAALDVLDTLDNPAAPFALTYYGFAH RKAGRIDLGMAYYDAALAADPDNLLARSYMGQGFVASGDMVQAQVQLTEIRMRGGRDT WPELALAQAIATGVGTTY" gene 1880481..1881047 /locus_tag="SKA53_09544" CDS 1880481..1881047 /locus_tag="SKA53_09544" /note="COG1272 Predicted membrane protein, hemolysin III homolog" /codon_start=1 /transl_table=11 /product="putative membrane protein" /db_xref="CDD:10988" /translation="MAGAVLLLGWAAGTADATQITTVAIYAATLITTFVASAVYHLTP WHSIRPLLRRIDHAAIYLKIAGTYTPLVVTIGSGFAYLVLALVWTLALIGVVLKLFFW RTPGRSGPALYLVMGWLSPPLIWSLWPVVPLSTIVLIALGGLIYTAGVPFYAAQRLRY ATAIWHGCVVIASACFFIAIASGVAAQG" gene complement(1881044..1881763) /locus_tag="SKA53_09549" CDS complement(1881044..1881763) /locus_tag="SKA53_09549" /note="COG0501 Zn-dependent protease with chaperone function" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13919" /translation="MRQVAVLFALILAACAPMDTAPRPTGATPVVQPPVDSGALLPAS QVMVNFRIAVTRIEPVAEQICRQRGNNSNCDFLILVDDRIGAPMNAYQTLDRNGRPVI VFTERLIADARNVDEIAFVLAHEAAHHIEGHIARQQQNAVLGAALIGSLAGALGGNSP DAVQTAQQLGATVGARAYSRNFELEADATGTRIAHAAGFNPLRGSEFFFRIPDPGNRF LGTHPANADRLRVVREVAATL" gene 1881867..1882100 /locus_tag="SKA53_09554" CDS 1881867..1882100 /locus_tag="SKA53_09554" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFSIEHDYDATVVTLVDEGKAPLREDVIINAFDDCVTLTQYDPR SDSDVQITMSMTQLRDLQAALDLPEGIYRLRKT" gene 1882097..1883200 /locus_tag="SKA53_09559" CDS 1882097..1883200 /locus_tag="SKA53_09559" /note="COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein" /codon_start=1 /transl_table=11 /product="deacetylase / probable acetylpolyamine aminohydrolase" /db_xref="CDD:24480" /translation="MTTGFFWDERCFWHGGGNYAGMLPVGGLVQPMNGGLPESPETKR RLKNLIAVTGLARDLVMRGAAPATTADLLRVHPAHYLERFKALSDAGGGELGRRTPFG PGGYEIAALSAGLAKAALLAVLQDEMDNAYALSRPPGHHCLPDFPNGFCLLNNIGIAI EAARAAGLAQRFAVLDWDVHHGNGTEAIFYDRADVLTVSIHQDRNYPMDTGAFADRGT GAGAGCNLNIPLPPGTGHKGYLAAMDRLALPAIRDFAPDVLIIACGYDAAANDPLGRM LATADTFAQMTARVMKLARDICDGRLVMVHEGGYSETYVPFCGHAVLQTMAGSTVHAP DPFAEVFPLRQPDAGFDAYLDTVIDDMAAHLTA" gene 1883378..1883956 /locus_tag="SKA53_09564" CDS 1883378..1883956 /locus_tag="SKA53_09564" /note="COG0778 Nitroreductase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10646" /translation="MPTPNPEALAFLLSRRSRPAKTLTTPVPDADALDTLLTAAARTP DHGKLEPWRFIVLTKPALMRLAGLVAARGTVLGIDPDRSAKAQDQYAQADLAIAVVSS PKPSDKIPQIEQVYSAGAVCLALVNAALSAGWGANWLSGWPSHDRDFIRDGLGLADHE NIAGLIHLGTETSAPPDRPRPDIAAITSWMTA" gene 1883953..1884639 /locus_tag="SKA53_09569" CDS 1883953..1884639 /locus_tag="SKA53_09569" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:12325" /translation="MILSSFLLALAQVSDPRFRSVLWRGIGLTIALLVGIYAGLLWLI AVLTAEPVTLPGVGQITWLGDLLSWGSLGLMILLSVFLMVPVASAITSLFLDEVAQAV EDTHFPDLPPMPPIGFFEGLRDTISFLGLLIAANLLAFGVYAMLPFAAFFIFYALNGF LLGREYFQLAAMRRIGRVDARAMAKRHQGTIWIAGCLMAVPLSVPFINLLIPVLGAAT FTHLFHKLSR" gene complement(1884629..1884883) /locus_tag="SKA53_09574" CDS complement(1884629..1884883) /locus_tag="SKA53_09574" /note="COG1335 Amidases related to nicotinamidase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVIWSMVFFIVLPLRMVSQGDAGEIVPGTHASAPADGQVGRKAK ITTYWALPLWCIITAVILSGVISVRDIDMFDRMGPAVVSD" gene complement(1884953..1885357) /locus_tag="SKA53_09579" CDS complement(1884953..1885357) /locus_tag="SKA53_09579" /note="COG0346 Lactoylglutathione lyase and related lyases" /codon_start=1 /transl_table=11 /product="methylmalonyl-CoA epimerase" /db_xref="CDD:25648" /translation="MIGRLNHVAIAVPDLVAASDQYRQMLGADVGAPQDEPDHGVTVV FITLPNTKIELLYPLGDQSPIQGFLDKNPSGGIHHICYEVDDILVARDHLLDQGARVL GGGAPKIGAHGKPVLFLHPKDFNGCLIELEQV" gene 1885486..1886202 /locus_tag="SKA53_09584" CDS 1885486..1886202 /locus_tag="SKA53_09584" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="response regulator" /db_xref="CDD:5334" /translation="MDTTDSILLARTPTAQRPLLGLTVLLVEDSRFASEAVRLLCLRS GARIRRADSLQTAQRHLAVYRPSVCLVDLGLPDGSGLDLIGSLARATPRIPVIIGTSG DETAHDAVIRAGADGFLAKPIDNLAAFQTAILQHLPADRQPPGPRALPDERVVPDRIA LRDDLSQVAHLLGQPEPNRSLPYVMQFLGDVARNGKDSDLSRAVRAVEITRNRSQNPH ADIAALSQLVQQRLAAGGPI" gene complement(1886199..1887977) /locus_tag="SKA53_09589" CDS complement(1886199..1887977) /locus_tag="SKA53_09589" /EC_number="6.1.1.12" /note="COG0173 Aspartyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="aspartyl-tRNA synthetase" /db_xref="CDD:10048" /translation="MHAYRSHTCADLTAADVGKTVRLSGWVNRVRDHGGILFIDLRDH YGITQVLCDPDSAAFADVEKLRSEYCIRIDGEVKARDASLVNPKLPTGEIEVFIREVE VLGAAKELPLMVFGDQEYPEETRLKYRYLDLRREAMQSNMKLRSDVVASMRRRMWDKG FREYQTPIITASSPEGARDFLVPSRLHPGKFYALPQAPQQFKQLIMVSGYDKYFQIAP CFRDEDPRADRSPTDFYQLDLEMSFVTQQDVFDTIQPVIGGVFEEFGGGRKVDQTWEQ ISYKDAALWYGTDKPDLRNPIKMQVVSDHFRDSGFAIFAKLLEQDGTEIRAIPAPTGG SRKFCDRMNAFAQKEGLPGMGYIFWRDQGEGMEAAGPLAKNIGPERTEAIRQQLGLGL GDAAFFLGGKPKAFEAVAGRARTVIGDELGLTDKDRFAFAWIVDFPIYEQDAETGKID FEHNPFSMPQGGMEALSGDPLAVRGYQYDLACNGYELVSGAIRNHKPEIMFKAFEIAG YGEDEVRKRFGGMVNAFQYGAPPHGGCAAGIDRIVMLLADASNIREVIMFPMNQRAED LMMGAPSEPMNEQLRELRLRVVPPES" gene 1888189..1891521 /gene="carB" /locus_tag="SKA53_09594" CDS 1888189..1891521 /gene="carB" /locus_tag="SKA53_09594" /EC_number="6.3.5.5" /note="COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)" /codon_start=1 /transl_table=11 /product="carbamoyl-phosphate synthase large subunit" /db_xref="CDD:10331" /translation="MPKRTDIKSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRV ILVNSNPATIMTDPGLADATYIEPITPEIVAKIIEKERPDALLPTMGGQTGLNTSLAL ADMGVLEKFGVEMIGAKREAIEMAEDRKLFREAMDRLGIENPKATIITAPKGENGKRD IKAGLQLAIDAIEYVGLPAIIRPAFTLGGTGGGVAYNREQYEHFCRTGMEASPVGQIL VDESLLGWKEFEMEVVRDKADNAIIVCAIENVDPMGVHTGDSITVAPALTLTDKEYQI MRNGSIAVLREIGVETGGSNVQWAINPADGRMVVIEMNPRVSRSSALASKATGFPIAK IAAKLAVGYTLDELDNDITGVTPASFEPTIDYVVTKIPRFAFEKFAGSEPHLTTAMKS VGEAMAIGRTFHESMQKALASLETGLTGFDEITIPGAPDAAAITKALAQQTPDRIRVI AQAMRHGMSDDDIHAVTKFDPWFLARIREIIDAEAEIRKNGLPVTETGLRKIKMMGFT DARLATLTGRTEDNVRRARHNLGVTAVFKRIDTCGAEFEAQTPYMYSTYETPVMGDVE CEARPSDRKKVVILGGGPNRIGQGIEFDYCCCHACYALTDQGYETIMINCNPETVSTD YDTSDRLYFEPLTFEHVMEILRVEQENGVLHGVIVQFGGQTPLKLANALHEAGIPILG TTPDAIDLAEDRERFQQLVQKLGLKQPVNGIAHSDAEAFEIAKTIGFPLVIRPSYVLG GRAMEIVRDQAQLERYISEAVVVSGDSPVLLDSYLSGAVEVDVDCLSDGENTHVAGIM QHIEEAGVHSGDSACSLPPYSLSAAMIAEIRSQTEKLARALHVVGLMNIQFAVKNEEV YLIEVNPRASRTVPFVAKATDSAIASIAARLMAGEPLSNFPLRAPYPASENPMDVLPL GDAFTLADPNTPWFSVKEAVLPFARFPGVDTILGPEMRSTGEVMGWDRSFPRAFLKAQ MGAGTNLPETGTVFISIRDADKTADMVQAAQILRAMGFDIVATRGTAAWLTEHAITCE VVSKVYEGGLTIVDRLKDGHIALVFNTTEGAQAVEDSRDIRAVALYDKIPYFTTAAAS HAAVLAMQAREEGDIDVRSLQG" gene 1891594..1892712 /locus_tag="SKA53_09599" CDS 1891594..1892712 /locus_tag="SKA53_09599" /EC_number="2.3.1.41" /note="COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III" /codon_start=1 /transl_table=11 /product="3-oxoacyl-(acyl carrier protein) synthase" /db_xref="CDD:27985" /translation="MHKAAITGTGVFTPSQVITNDELVAAFNAHADLWNAQNADAIAT GAVAAKPHSSADFILAASGIEQRYVLDKSGLMDPARMFPRLPQRPDDAPGYMAEIGVD AAQKALAAAGVNAADVDLVICAASNMERAYPAIGVEIQQLLGAGGFAFDMNVACSSAT FGIQTAADMIRAGSIRRALVVNPEICSAHLEWRDRDCHFIFGDVATATLLERDEGLDK PHFKVLSTRCATQFSNNIRNNNGYLRRTHDAMDDRRDMQFMQNGRKVFKEVLPLVSQH IADHLADDGVSADSLRRLWLHQANKTMNDYIGRKVLGRVPAPDEQPNILQDYANTSSA GSIIAFAKHSVDLAPGDKGLICSFGAGYSVGSVIVERA" gene complement(1892709..1893419) /locus_tag="SKA53_09604" CDS complement(1892709..1893419) /locus_tag="SKA53_09604" /note="COG0431 Predicted flavoprotein" /codon_start=1 /transl_table=11 /product="NADPH-dependent FMN reductase" /db_xref="CDD:10305" /translation="MDLSDLPNITPGALQRLDHATLAGPDDAGHPPRILLLYGSLRPV SYSRLCAEEGARVLRALGCETRFFDPSGLPLPDDGVDADHPKVAELRDLALWSEGMVW SSPERHGAMTGIMKTQIDWLPLSPIGGIRPTQGKTLALMQVSGGSQSFNTVNQMRILG RWMRLITIPNQSSVPMAWQEFEGGRMKPSPLYNRIVDVMEELARFTLMTRSRDKMLTD RYSERVETLQDVHQRISG" gene 1893444..1894127 /locus_tag="SKA53_09609" CDS 1893444..1894127 /locus_tag="SKA53_09609" /EC_number="2.7.1.21" /note="COG1435 Thymidine kinase" /codon_start=1 /transl_table=11 /product="thymidine kinase" /db_xref="CDD:11149" /translation="MMDLSQMARVNRPAGLAKAADSGQISGMAKLYFNYSTMNAGKST VLLQASHNYIERGMQTYLMIAQLDNRAGHGRIGSRIGIGADADTFAPGEDLFAKIKAR LDCGPCACVFIDEAQFLDPEQVWQLARAVDDLGVPIMTFGLRVDFLGALFPGSAALLA LADEMREVRTICHCGKKATMVVRKDAEGRVMTAGDQIVIGGNDRYVSLCRRHWRQEMG EDVPEKKNF" gene complement(1894186..1896378) /locus_tag="SKA53_09614" CDS complement(1894186..1896378) /locus_tag="SKA53_09614" /note="COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase" /codon_start=1 /transl_table=11 /product="primosomal protein N'" /db_xref="CDD:10916" /translation="MIPSYFPQGDLVGVLTTQPLDRLLDYKAPEGGCHLGAFVEVPLG PRKVLGVVWGPGQGDYDSAKIRSVIRVLDLAPMRDEMRDFLIRAADYTLTPMPAMLRL GTRAPGLGDAPSMRKVYRLGTRDPDRKTAARDKVLAVLRDYGGLAFTLGELADAADVG TSVVKGLVAQGAVLEEDAPRDVPYPPLDPDHGGKALNPDQAVGADALRAALRKEGYGT TLLKGVTGSGKTEVYLEAVAECLRMGKQALVLLPEIALSGEFIERVEARFGMRPAEWH SGVTMTERRRCFRMVGQGDAQLVVGARSALFLPFRNLGLIVVDEEHDTSYKQEDGVLY NARDMAVLRAALCGAQVVLASATPSLESWANAQAGKYARLDLTARFGAAVMPEMAAID MRVEELPHGRWVSPTLRDAIANRLEKGEQSLIFLNRRGYAPVTLCRACGHQIGCDHCD ARMVEHRFQKRLMCHQCGETKPIPVICPSCGAADKLAAVGPGVERMGEEVAALFPTAR IAVLSSDLYGSARAMKAHIAEIAQGGTDIIIGTQLVAKGHNFPLLTLVGVIDADLGLQ GSDLRAAERTFQLMRQVAGRAGRAAIPGAALLQTYQPDHPVIRAILNGDEESFWSAEA AERRGAGVPPYGRMAGIILSGPDLKAVFDLGNDMARRDGPLRQIGAQVFGPAPAPIAR VRGKHRVRLLVKADKSAPLQAALAQWVAQFRLPANLRLAIDIDPQSFY" gene 1896463..1897116 /locus_tag="SKA53_09619" CDS 1896463..1897116 /locus_tag="SKA53_09619" /EC_number="2.2.1.2" /note="COG0176 Transaldolase" /codon_start=1 /transl_table=11 /product="transaldolase" /db_xref="CDD:28136" /translation="MKFFVDTAELDQIKELHDLGMVDGVTTNPSLIAKSGRDILEVTK EICDLVKGPVSAEVVALDADTMLAEGRKLAKIADNIAVKVPLTWAGLQTCKTLSDEGI MVNVTLCFSANQALLAAKAGATFISPFIGRLDDINLDGLELIEDIRTIYDNYGFKTQI LAASIRTANHMSDCAKIGADVATAPPAVIKAMANHILTDKGLAGFMADVEKAGIKIL" gene 1897261..1897956 /locus_tag="SKA53_09624" CDS 1897261..1897956 /locus_tag="SKA53_09624" /note="COG3159 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15638" /translation="MTESSLADDLRARIIANPDFLLDDHDVMRALVGANDDARGGNIV DLRAIAMERLEARFDRLEDTHRNVIAAAYDNLAGTNQVHRAILRMMDAQTFASFLRDL TGDVADTLRVDAIRLALETDTPADHPAMDPAIVVVAAGFVDQYITLGRNMPARQVTLR KFQNVGASLYGDRAPFIQSEACLKLDLGEGRRPAMLVMGSENAAQFSQSQGTDLLVFF TGVLERVLRRWLA" gene 1897956..1898876 /locus_tag="SKA53_09629" CDS 1897956..1898876 /locus_tag="SKA53_09629" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="tyrosine recombinase" /db_xref="CDD:27719" /translation="MAFIAPALTATLDHWLDHERALAGVAENTIVAYRADVLGFMAFL TQHNGDTQGLGPLARVTLSDMRAWMAHERGRGVAARSLARSLSAVKSFYRWLAAREGF EPTAVLSTRAPKFQPKLPRPLSAPAASDMIDQIGLQACDPWVAARDTAVVTLLYGCGL RISEALSLQGRDAPLPPVLRITGKGGKQRIVPVLDIARDAVAGYLRLCPYEQAADAPL FRAIRGGPLAPRAIQKVVEQTRLQLGLPGTATPHALRHSFATHLMAAGGDLRCIQELL GHASLSTTQAYTAVDAAQLMAVYDRAHPKA" gene 1898895..1899614 /locus_tag="SKA53_09634" CDS 1898895..1899614 /locus_tag="SKA53_09634" /note="COG1183 Phosphatidylserine synthase" /codon_start=1 /transl_table=11 /product="phosphatidylcholine synthase" /db_xref="CDD:10901" /translation="MKIGYDVLMNLRTKALFVHLLTASGAVFAMLAMLAAVDQKWDLM FLWLVVAFFVDGIDGPLARRYEVTRNAPVFDGVLLDLIIDYLTYVFVPAYALFKSGLL PGWTGWTAIIVITFASALYFADTRMKTKDYSFSGFPGCWNMLVLVIFALEPNFWVSLM LVSSLAVAMFAPLKFVHPVRTKRWRNVTLPMALGWTFFAAWAAWVDFHPDTLAHWGLV VTSVYLLFAGIGQQIIYGKDG" gene complement(1899720..1902614) /locus_tag="SKA53_09639" CDS complement(1899720..1902614) /locus_tag="SKA53_09639" /EC_number="6.1.1.5" /note="COG0060 Isoleucyl-tRNA synthetase" /codon_start=1 /transl_table=11 /product="isoleucyl-tRNA synthetase" /db_xref="CDD:9935" /translation="MCAETTDYKDTLNLPQTDFPMRAGLPKREPEWLARWAQIGVYEK LRAKAAGRTPFTLHDGPPYANGNLHIGHALNKILKDMVVRSQQMMGRDARYVPGWDCH GLPIEWKIEEKYRAKGQDKDAINVVDFRQECRKFAEGWVDIQREEFKRLGITGNWDDP YLTMAFHAERVIAEEFQTFLMNGTLYQGSKPVMWSPVEKTALAEAEVEYHDRQTDAIW VKFPVREASGGSILNKATVLIFTTTPWTIPQNRAICFGPNIAYGLYEVTGTPDECWAA VGDTYLIADALAADVMDKARLDAGMFTRLRDVTPEELAGLTCAHPLAGADPEWDFPVP LLPGDHVTDDTGTGFVHTAPSHGDDDYAIGVKHGLPMTYNILDDSSYRADLPFFGGEC ILKPNGKPGGANKAVIDKLKEVSALIATKRITISDAHSWRSKAPVIRLNRPQWFAAID KAVGDGQDTYGTTIRERALRSIDELVTWTPKTGRNRLYSMIEARPDWVLSRQRAWGVP LTCFTKKGTQHSDPDFLLRNADVNARVLEAFEAEGADAWYKDGAKARFLTGIVDPDAY DQVFDILDVWFDSGSTHAFVLRDRADGSTDGMADLYLEGTDQHRGWFHSSMLQACGTK GHAPYRGVLTHGFTLDQKGMKMSKSIGNTIAPEKVVQQYGADILRLWVAQSDYTADLR IGDEILKGVADSYRRLRNTMRYMLGSLADFSESDRMDPADMPELERWVLHRIAELDVT VREGYARYDFQGVFQAIFTFATVDLSAFYFDVRKDALYCDGDTARRRAARTVLDILFH RITRWLAPMLCFTMEEVWLERFPGDDSSVHLEDFADTPADWRDDALAAKWATVRRARR VVTGALEVERTAKVIGASLEAAPTVYVTADVAKVLDTTSFDDLCITSAITISTDPAPE GAFRLDDVADIAVVFAHAAGDKCERCWKILPDVGTHAHTGVCGRCDAALG" gene complement(1902781..1903704) /locus_tag="SKA53_09644" CDS complement(1902781..1903704) /locus_tag="SKA53_09644" /EC_number="1.3.1.12" /note="COG0287 Prephenate dehydrogenase" /codon_start=1 /transl_table=11 /product="prephenate dehydrogenase" /db_xref="CDD:10161" /translation="MAVIYDKVALIGLGLIASSMCHAIRRSGLARQIVGYARSAETRA TAREIALCDLVTDTAAEAVADADLVVLCVPVGAMADVARDIGPHLKLGATLSDVGSVK RAVIDAVAPFVPEGVHFIPAHPLAGTEHSGPRSGFAELFDNRFCILVPVAGTDPAAVA RLADLWRGMGSNVDEMDADHHDLVLAVTSHTPHLIAYTMVGVADELRRVTDSEVIKYS AAGFRDFTRIAASDPTMWRDVFLHNKEATLEILGRFTEELFALQRAIRLGDGDHLHAY FTRTRSIRRSIIEAGQDTDAPDFGRAKAKKT" gene complement(1903704..1904789) /locus_tag="SKA53_09649" CDS complement(1903704..1904789) /locus_tag="SKA53_09649" /EC_number="2.6.1.9" /note="COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase" /codon_start=1 /transl_table=11 /product="histidinol-phosphate aminotransferase" /db_xref="CDD:9954" /translation="MATGIQPQPGILDIALYVGGASRLDGQSNVLKLSSNENPLGPSP AAVQAFSRAGHDLHRYPSTDHADLRVVIAEVWGVDPARVVCGVGSGEILKLLAEGYAG PGDEVVFTEHGFSMYPIYAHACGATPVIVPERDRVVDVDAILAACTDRTRLIYLANPA NPTGTMIPEPEVARLAAGLPPQALLVLDGAYAEYVEGFDAGRALVEARENVIMTRTFS KIYGLGGMRVGWAYGPQAVIDVLNRLRGPFNLSAAALSAAEAAMRDTAHTERCRAENA RWRDWLAAGLADLGVPSDPSSANFILARFASAAEAQDCDVYLRSQGIIVRQVAGYGLP QCLRITVGDESACRRVVHAVGQFKGSR" gene complement(1904968..1905588) /locus_tag="SKA53_09654" CDS complement(1904968..1905588) /locus_tag="SKA53_09654" /note="COG0522 Ribosomal protein S4 and related proteins" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S4" /db_xref="CDD:10393" /translation="MTKRTAAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGK LSDFGTQLRAKQKLKGYYGDLTEKQFRRIYAEAERVKGDTGENLIGLLERRLDAVVYR AKFVPTVFAARQFVNHGHVTVNGQRVNIPSYRVKEGDVIEVRQKSKQLEIVLVAAQLA ERDVPDYMEVDHNKMIATFVRTPTLGDVPYPVTMEPNLVVEFYAKN" gene 1906018..1906485 /locus_tag="SKA53_09659" CDS 1906018..1906485 /locus_tag="SKA53_09659" /note="COG3238 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12575" /translation="MSNPVPAPRLLHFTAAFGAGSLLSLMVLFNGTLATYGSLLFASW VPHLTGTALAIVILLALRPRRAGISHPPLWAYLGGVVGGVTVMLTSATMNTALALSGT IALGLAGQMLFSLFADIRGLFGLPQRMPKARDYLALALIIAGSLVLIFLGGAA" gene 1906482..1906907 /locus_tag="SKA53_09664" CDS 1906482..1906907 /locus_tag="SKA53_09664" /note="COG3238 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12575" /translation="MIGFAALALLAGVLVSLSRQINGRLALSTSAWESSFWNHVVGLG FITLAALVFGGLFAGAPQDAPWWAYLGGPVGVVFIAAGSWLIARIGAAQTALLIIAGQ MISGVMIDIIMGTAGNTLARIAGVALILAGMWVARSAKD" gene complement(1906920..1907756) /locus_tag="SKA53_09669" CDS complement(1906920..1907756) /locus_tag="SKA53_09669" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10325" /translation="MKKLVLTGAAGRLGSHLREPLTRMCDELVSTDIVADIGKLYDGE SYVQADLTDLAAMEAILKDATMVVHFGAIGDEAPWDDILQSNIIGAYNVWEAAYRQGV KRVVYASSVHAVGMHLKTDTIGLDAPHKPDTYYGLAKCFAEDLASLYWDKRGVESVCM RIFSCAQATNARSIGTWLSYGDLIHLVERSIDSPVVGFTKVWGISNNDRAVVDNSKAG HLGFRPKDNAEQFAQDVFAKTPPLDNKDLANLCIGGPFATVELGNSGVAVLGVVNDKK TT" gene complement(1907778..1908980) /locus_tag="SKA53_09674" CDS complement(1907778..1908980) /locus_tag="SKA53_09674" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10534" /translation="MQTPLQNSYDVVIIGGAMLGSAVAWFLTDNPDFDGSILVVERDP TYAQAATSLTNSCIRQQFSAAINVQISQFGADFVKNFPRYMGNDPRVPQPRLHSFGYL YLADTPAFAAALRDAQTVQAACGAGTRHMTRDEIAAAYPFYQLDDIIAGNHNLVDEGY FDGNTLFDWWRRSARERGVDYITNEVTAITRDASGTRVQSVTLATGDTIACGHVVNAA GTRGAQVAAMAGISIPVEPRKRYTFIFEAAQRLDRDLPLTIDPSGVHVRTDGQYYMAG CPPEDDQPVDPTDFTEDHSIWEDHVWPTIATRIPQFEAVKLRNSWAGHYDYNTLDQNA IAGPHSGVVNFIFVNGFSGHGFQQSPAMGRGIAEWITYGAYRTLDLTPFGYTRIAKGE KFIEKAVI" gene complement(1908980..1910662) /locus_tag="SKA53_09679" CDS complement(1908980..1910662) /locus_tag="SKA53_09679" /note="COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit" /codon_start=1 /transl_table=11 /product="putative N-methylhydantoinase B" /db_xref="CDD:3047" /translation="MSNVANQVMWNRLISIVEEQAQALVRTAFSTSVREAGDLSAGVY DAAGLMLAQAVTGTPGHVNAMADAVPHFIRRIGRATMREGDVYITNDPWEGTGHLHDF TVVTPSFYQGRHVGFFACTAHVVDVGGRGFGADAASVYEEGIHIPIMRFAHAGRVDET LIAIIRGNVREPEQVVGDLYALATCNEIGQRRLAEMLAEFALHDLDGISDFILTNSRR ATLERIAALPRDSATGAMRIDGFDVPIDLCVSLKIEADRIICDFTGTSGVDKKGINVP LVYTKAYACYALKCAIAPEIPNNAASLAPFEITAPEGSIVNAVHPAPVALRHIIGHMI PDVVFGALDKILPATVPAEGAGCLCNFQVSLRPATGQGRRAEVLTFNSGGAGARPALD GLNATAFPSGVMTMPVEATEHTGPVIIWRKELRPDSGGAGQFRGGLGQFMEVGPAQGF EADFSAMFDRVHHPARGRQGGADGAATTIALDDGSTMQGKGKQFVHAGRRVMLGLPGG AGYGPAAKRDPALIKRDLARGYISAKAAMRDYGLTEADVAAVQAQVTKGETA" gene complement(1910659..1912734) /locus_tag="SKA53_09684" CDS complement(1910659..1912734) /locus_tag="SKA53_09684" /note="COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit" /codon_start=1 /transl_table=11 /product="hydantoin utilization protein" /db_xref="CDD:10020" /translation="MQHAIRLGVDIGGTFTDVVLELAGASHSTKVLTTYAAPEDAIID GMHQVCAKAGISPAQIGQIIHGTTLATNALIERRGARTALITTEGFRDVIEMRTESRF EQYDLNLQLPEPLLARQHRFTVTERVDAQGAVLIPLDREEVVALAEDMASYNFDSIAV GLIHAYLNPEHERMIRDVLAERLPGVMVSLSSEVSPQMREYERFNTTVANAYIKPLMK TYLDRLKSRLADEGADCPVFLMHSGGGIISLENAAEFPVRLVESGPAGGAVFAAHIAA RYGLDKILSFDMGGTTAKICLIKNQTPKTARVFEVARSYRFKKGSGMPISIPVIDMVE IGAGGGSLAHVDSLRQIRVGPESAGSEPGPACYGRGGSRPAVTDADLVLGRLDPDNFA GGSIRLHKGASDTALTALGAPLDMDALTAAYGLAEVVDENMANAARVHAVENGEDLAG YTMIAFGGAAPLHAGRLCEKLGVTRLLVPTGAGVGSAIGFLRAPFSFEATRSVYMKLS AFDAAMVRDLLAALAEEATGFVRNCDAAAPITAQYKVYMRYTGQGWEIPVSLCADQAA NPDAVTFQALFEADYTALFGRTVTGMDIEITVWAVNATTASATAAPLPVTPAGRAITG HSTRALFDPALAKTVQAQIVPRAGLAPGDTVTGPALITEDETTIVIPASRHAIARPDG SIDITEISA" gene complement(1912818..1913705) /locus_tag="SKA53_09689" CDS complement(1912818..1913705) /locus_tag="SKA53_09689" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulators, LysR family" /db_xref="CDD:10453" /translation="MRLNLKQLEAFVWVADLHSFRGAADRLGTTQPNISARIAGLEQA LGIVLMTRDAGSVVLTAKGRDLLAHARRVLDATDALIAAADQKALIDGTLRLGVTEMI VHTWLRDYLRRLKETYPKLSVELTVDLSVNLERMLADRRLDLAIQNGPFTRLTSGQID LGAYDMIWVASPALGLAGQAGSDDLAAHPILTHARDTHLYAQVAAHFATAKLPVRLVP SSNLAACLHMTIDGMGVATMPAAMVADPLARGQLVQVDYGWTPAPLHFFARYDAERSA RIVADAAQVAVVISAALDP" gene 1913845..1914981 /locus_tag="SKA53_09694" CDS 1913845..1914981 /locus_tag="SKA53_09694" /note="COG2217 Cation transport ATPase" /codon_start=1 /transl_table=11 /product="twin-arginine translocation pathway signal sequence domain protein" /translation="MNRRKFLALSGGGIILAATATLGTIASRTPATALAPWDRAGSMY DEPRMRALSYAILAPNPHNRQPWLVDLSEPDRVLLKVDTNRLLPDTDPFNRQITVGLG CFLELLVMAAAQDGFAVDLDVFPQGADQMALDDRPVAIATFRAGAGRPDPLFAHVMAR RSNKEPFDTTRPIAPDTIAQIAGAAIYGSRVAGDASQGSITTLRQLTTDAMIVEIDTP HTFKESVDLFRIGKAEVEANPDGIDFSGPLFETLGAFGLMTREAMADPTTNMFAQSKA VLQANTETAMGHLWQATRGNTRADQIIAGRDWLRLNLAATAAGVDMQPLSQALQEFPE MAAHHRAAHQMLAQDGETLQMLCRLGYGPTIAPSPRWPLEAKLI" gene 1914989..1915435 /locus_tag="SKA53_09699" CDS 1914989..1915435 /locus_tag="SKA53_09699" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /db_xref="CDD:24258" /translation="MDENGRRVFQFFNEIGIINQLAGAIFAARLPDGLHVSHFALLNH LVRLGDEKTPLALASAFQVPKTTMTHTLAVLEKRAAIRLTPHPSDGRSKIVFLTEAGR KLHDDAIASMADPIRQITADLGDGTISDLIPQLEKIRAYLDQNRSI" gene complement(1915438..1918743) /locus_tag="SKA53_09704" CDS complement(1915438..1918743) /locus_tag="SKA53_09704" /note="COG0587 DNA polymerase III, alpha subunit" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit alpha" /db_xref="CDD:10457" /translation="MPQNDHQHPRRALEGDGFVPNPRADFVELGVATCFSFLRGASDA VDLAVTAHSLGYDKIGCADLNTMAGVVRLHAAALKAGITPVIGCRLQLVSGEAFLAYP RDRASYGRLCALLSKGKMRDAGGGWQAKGACDISLDDLAAHAADVQLIAVPGTDLRHF AALLPRLVRALPSLRHVAASCLYRGDDRARINALDALARRYGLSILATNDVHYHAPDR RPLQDVMTCIRHKTTIAKAGFLLDANAERHLKSPAQMARLFADWPHAIRATRDVADAS TFDLRDLAYEYPHETVPEGRSPQEYLEELTWKGAAARYPDGVPAALQATLRKELALIA KLDIPQYFLTIHEIIDFARNQCKPPILCQGRGSAANSAVCYVLGITAVDPAKNDLLFE RFISEERKEPPDIDVDFEHERREEVIQHIYNKYGRNRAALCATVIHYRPRMAVREVGR VMGLSEDVTTALAKTIWGSWGREIGAAQAAEAGIDLRDPLMARTIRLADQMIGMPRHL GQHVGGFILTEKALTETVPIGNGAMPDRSFIEWDKDDIDELRILKVDVLALGMLTCIR KAFDLIAAHHGKRFDLATVPQEDPAVYDMLCKGDSLGTFQVESRAQMNMLPRLKPRAF YDLVIQVAIVRPGPIQGDMVHPYLRRRSGAEVVEYPSPGPQYDPDELKKVLGRTLGVP IFQEQAMKIAMVAAEFSTKEANELRKAMATFRSHGTIGALEEKMVGRMIRRGYDPAFA ARCFNQIKGFGDYGFPESHAASFALLVYISSWIKCHYPDVFCAALLNSQPMGFYAPAQ IVRDAREHGVIVRAADVNYSDWDNSLEPLAPGVFAVRLGLRQIDGMRRDMAQRIMDAR GRPFDDLKDMKTRAKLDAGTVQRLAAADALRSMMLDRRQALWDARALRDAPDLPLFAD TRDEGAEVRFDLPQMPVCEQVVADYQTLRLSLKAHPLAFLRRSMTRQGYRAAAELAQM RSGQPVKLAGVVLIRQRPGSAKGVCFITLEDETGVANLVVWPKVMEANRKTVMQARLI DVHGVVQRDGDVIHVVAHVLTDRSDALARLSEDRMTPPLAHADEVRRPIGGDPRVHHP RDVRVIPKSRDFY" gene complement(1918804..1920270) /locus_tag="SKA53_09709" CDS complement(1918804..1920270) /locus_tag="SKA53_09709" /note="COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10263" /translation="MERQGNAPPDDIPLVLARDGQHGPVVHAANRAARLAGIMAGSRV VDMRALCPDLQVAYADQAGDRAALDRLVLWARRWCPWNVRDGDDGLILDTTGSDHLLG GEAAMLVEMETQLSLLGLTSRLAVAPTWGAAWALARHGPVRAICGAEDMVVKLGALPV TGLRLDPATVLLLRRLGLKTIGAVMDVPRLSLTRRFAKAALPTNPLLRLDQALGKLAE PVSSVDPAPRLIVQSRLAEPIFDPTPYLPALCADLCDQLQQAGQGCRRLHLTIYRTDG DISHLSVAMSALSRDPVHLNGLFRDKLDRINPGYGFDLIALEAADLGAVKTVQSNLDG GSDDDLELAHLLDRLAARFGDRAVTRPVLRASHIPERAEMRLPVLADAPALMPVPASE RPIRLLDQPEEVRVLYAVPEGPPAQFVWRRQTHRVTRYAGPERIAPEWWRDRPGTRLR DYFKVEDQIGRRLWLYREGLHSDGRGGDPRWFVHGMFA" gene complement(1920239..1920901) /locus_tag="SKA53_09714" CDS complement(1920239..1920901) /locus_tag="SKA53_09714" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13715" /translation="MQKTLQGFPPQPGLSRFTLSEVFVETAADAAALGFALARLPRGQ RPVLWVQDRVSRKESGYPSLAGIGPLRPIIMVNVTRAADVLWTMEDGLRCRSLGGVIG EIWGDPAVLDFTATKRLALRSEAAGVPCWLIRRLAHPNLSAARDRWRIGARPSAPHPH DSQSPGAPRWAVELFRSRHAKPGQWVASYDRAADRVDLVAAVSDRTLDAGDGAAGQRA AG" gene 1921110..1921196 /locus_tag="SKA53_t11083" tRNA 1921110..1921196 /locus_tag="SKA53_t11083" /product="tRNA-Ser" gene complement(1921309..1921998) /locus_tag="SKA53_09719" CDS complement(1921309..1921998) /locus_tag="SKA53_09719" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="phosphate regulon transcriptional regulatory protein PhoB" /db_xref="CDD:10613" /translation="MADLQPSVLVVEDEPAQREVLAYNLESEGFRVIKAADGNEALLL IEEEQPDLILLDWMLPGTSGIEICRQIKSRPAFRMTPVIMLSARSEEVDKVRGLETGA DDYISKPYSIIELLARVKAHLRRSRPATMGERLIYNDILLDSETHKVFRGENELKLGP TEFRLLTTFMEKPGRVWSRDQLLDRVWGRDIYVDTRTVDVHVGRLRKVLGSHGGEDLI RTVRGAGYALG" gene complement(1921998..1922714) /locus_tag="SKA53_09724" CDS complement(1921998..1922714) /locus_tag="SKA53_09724" /note="COG0704 Phosphate uptake regulator" /codon_start=1 /transl_table=11 /product="phosphate transport system regulatory protein" /db_xref="CDD:10573" /translation="MNDNHIVASFDRDLESIQATMVRMGGLVEQALADSAQALRTRDD ELAEKVRIGDKVIDDLDLLIKSDAARLLALRAPTAKDLRLVLAVMEISSHLERCGDYA KNIAKRTMAMSGAGAIGGTLSDMARMSVFVETMVREALDAFIARDPVKAAEIIARDAE ADQIYNTLFRSFLTHMMEDYKNITVGMHLHFIAKNIERVGDHATGIAEQTIYAVTGAL PEDDRPKQDNTTSAFLESDV" gene complement(1922726..1923487) /locus_tag="SKA53_09729" CDS complement(1922726..1923487) /locus_tag="SKA53_09729" /note="COG1117 ABC-type phosphate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC phosphate transporter, ATPase subunit PstB" /db_xref="CDD:10839" /translation="MNDTKISAKGVQVYYGETHAIKDVSVEIGDKTVTAFIGPSGCGK STFLRCLNRMNDTIDICRVQGSITMDDQDIYDPRVDPVQLRAKVGMVFQKPNPFPKSI YDNVAYGPKIHGLARNKADMDGIVEASLRRAALWNEVKDRLDSPGTGLSGGQQQRLCI ARAVATAPEVLLMDEPCSALDPIATAQIEELIDELRQQFSVVIVTHSMQQAARVSQKT AFFHMGHLVEFNDTDQIFTNPQDPRTESYITGRIG" gene complement(1923563..1925290) /locus_tag="SKA53_09734" CDS complement(1923563..1925290) /locus_tag="SKA53_09734" /note="COG0581 ABC-type phosphate transport system, permease component" /codon_start=1 /transl_table=11 /product="phosphate ABC transporter, permease protein" /db_xref="CDD:10451" /translation="MSDANLSGAVPIRKSSLLEQSALVRKRHRTGTILRWLGFSAITL VLMFLAILLWSIVSRGVPALFQYQAQIELYYDPAVLNPDGGDVSAEEIGTINLRTGFE RGIFTSSLRSTLENAGIDIEGTVSRRWTAEAIGALDAAGLTGASAIIAAAPTPADAAR QLGQAGSAVRAAVAAMDGDDTNAAITARDAAAQALNDLGFAQAADRVASIDPSDSAAL AETGYQAALTDAAGALRQPAQFDDAALSSIIFATNRRDVRDQLVDNPDLVGTTEKTGV PIDISVTRYLSGELSGVGTAQMPPGFDIGQLALVDAMVEADLISNSFRWHFFTNPYSQ SGEITGIGPALMGSAYMMLVVLVFSLVFGVAASIYLEEFAPKNRFTNFIEINIANLAA VPSIVFGILGAAILFTLMDLGFGSSIRGTALLGGLVLSLMTLPTIVIATRAALKAVPP SIADAALGVGASKVQMVFHHKLPLAAPGILTGTIIGIAQALGETAPLLLIGLSVSTGA ALLSSPFSGGLLEQAQSMPTVVYLLAQNQDAPVREGLAQSAILVMLVLLFALNILAII LRRKFERRW" gene complement(1925290..1926849) /locus_tag="SKA53_09739" CDS complement(1925290..1926849) /locus_tag="SKA53_09739" /note="COG0573 ABC-type phosphate transport system, permease component" /codon_start=1 /transl_table=11 /product="phosphate transport system permease protein pstc" /db_xref="CDD:10443" /translation="MGAFITFPAVLLLIVLLAIAGYALGRRKALSFPAQSTHSRPHQH AWHVVFATAAPSLLVVMLWLFFAGIASNIYTNMVTPDDLVDVRLSAQAREGLTEREID IREGVLRTQFVAGVRSLASALDGYVADGNATEADIAGWNAEQDPIADRLRAGGQVLGP AVTNGMLSVAQVVRQFDRRVGTVGPIISLVLAIAGFVIALRRISAEFRARVVVERWIS GFLIFASTMAILATVAILAALTLPSLSFFREYGFFNFLFGMAWAPAGDVVGIPEGRDG SYQSALGFVPLIWGTLYISLVALLVAVPLGLLAAVYLSEFASRRARSWVKPALEILAG VPTIVYGIFALITIGPFLQAVVGATVMPNTVSVMTAGVVMGMMLVPFISSLSDDVINA VPQTLRDGSLAIGATQAETVVQVILPAALPGIVGAIVLAASRAIGETMIVVLAAGALS NVQGIEPNPFGAVVTVTTRIVAVLTGEGSGFDSIDVLAVFALAFTLFFITLALNLLAQ RMVAKYREQYD" gene complement(1926949..1927956) /locus_tag="SKA53_09744" CDS complement(1926949..1927956) /locus_tag="SKA53_09744" /note="COG0226 ABC-type phosphate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC phosphate transporter, periplasmic phosphate-binding protein" /db_xref="CDD:10101" /translation="MMSAAAVSAQSRANVQAAGSSTVLPYANIVAEAFGAETDFATPV VEGGGSSTGRRMLCEGVGEGTIDIANSSSLMKDSERETCIAAGITPIEVRFGYDGIVF ASDINGASFAFEPVHWHIALAAEHFIDGALVPNTLTNWAQVAEIAQSLGVAGDLPDQE INAFIPGTNHGTREVFNEKVLLDGCEQGGFLAAMLAAGVDEDTAEDACMNTRTDGRSV DIEGDYPQTLANLDSTPTGIGVFGLSFYENNTDRLQVATMSGVTPSTETISVGEYPVS RPLQFYVKQEHIGVIPGLLEFVEFFISDEIAGPGGPLSDYGLVPDPKLAETQAMVAAL R" gene complement(1928430..1929410) /locus_tag="SKA53_09749" CDS complement(1928430..1929410) /locus_tag="SKA53_09749" /EC_number="1.1.1.169" /note="COG1893 Ketopantoate reductase" /codon_start=1 /transl_table=11 /product="2-dehydropantoate 2-reductase" /db_xref="CDD:11602" /translation="MKICIFGAGAIGGYMGAKLAEAGADVSLVARGPHLAAMQANGLT LIEEGETKTYPVNASDDPAALGHQDYVIVTLKAHSVPPVVARMQPLIGPDTTIVSGVN GVPWWYFHKVGGPLEGTRLASVDPGDAQWNGFGPDRVLGCVVYPAAEVIAPGVVKHIE GNRFSLGEPDGSKSERATRLSEALSKAGLKAPVRPKIRDEIWVKLWGNLSFNPISALT HATLDVLCTDPGTRAVARAMMLEAQDIAEKLGVKFPIDVDRRIDGGAAVGAHRTSMLQ DLDAGRPMEIDALVGSVRELGRVTGTPTPTIDTVLALVSLRAKMAGLYGN" gene complement(1929415..1930851) /locus_tag="SKA53_09754" CDS complement(1929415..1930851) /locus_tag="SKA53_09754" /note="COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /codon_start=1 /transl_table=11 /product="AMP-forming acyl-CoA synthetase/ligase" /db_xref="CDD:10192" /translation="MTYGQLNSLTRTVRTFLRSAGIGAQDRVAIVLPNGPEMAAAFVT VAQSATTAPLNPAYKEDEFAFYLADLKARAIILEAGYDGPARAAAARFDLTVLELTAT EPAGTFTLSTNVTGTAVDTVPTADDVGLILHTSGTTSRPKIVPLLQSNIAASARHISA SLALTPADRCMNVMPLFHIHGLIAAVSSSLAAGGSVWCAPGFDALKFFGWMEDAQPTW YTAVPTMHQAILARAGRNAETIAKVPLRFLRSSSASLPGPVMEALADTFKAPVIEGYG MTEAAHQMASNPLGAGKQKPGSVGIEAGPLVRVAHEVENRLVAGVGEIVISGPNVTPG YEGNPEANEKNFFEAENRRWFRTGDQGEFDAEGYLTLTGRLKEIINRGGEKISPLEVD GVLSAHPAVAQVVTFAIPHDKLGEDVGAAVVLKEGHTATDRDIRDFASAQLAAFKVPR KILILDDIPKGATGKLQRIGLAEKLGLV" gene complement(1930990..1932501) /locus_tag="SKA53_09759" CDS complement(1930990..1932501) /locus_tag="SKA53_09759" /note="COG3333 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12667" /translation="MEVMSFLADGILLALEPINLALIIAGVTVGLFIGAMPGLGSVNG VAILLPITFLVPPNSAIIFLAAIYYGAMYGGAISSVTLGIPGASTAVATTFDGRPLAL QGRASLALVTAALASFVGGTVATVLFTLFAPVLASTALSFGPPEIFALMLLAFATFVG LGGDDIPKTVFSICLGLVLAAVGFDTISGEPRMVLFEIDGFMRGIGFIVLAIGVYGIG EMLWTIEQTRGEVTTTNPKMTAKGMMSDAKEAAQRGWKGTAIGSLIGFFVGILPAAGA TPGSLMSYGVAKMLSKTPEEYGKGSPDGVAAPESANNSASTGSMLPMLTLGIPGSPTT AILLGGMVIWGLTPGPRLFIDQSEFVWGLIGSFYISNIAALVINLAFIPLFVWMLRMP FTILAPLIFVLSIVGGFAASRSIHDLWLIVIFGLSAFFLRKFDYPLAPAVLAIVLGPI AEPTLRQSLLLSSGDPMIFLTRPIAGPITVIAIILILLPAVKLLRRKKTFAKN" gene complement(1932526..1932885) /locus_tag="SKA53_09764" CDS complement(1932526..1932885) /locus_tag="SKA53_09764" /note="COG0395 ABC-type sugar transport system, permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLLSCLASAWKWWRTQSPASRSDEPFMDAFGWRTLLYVGGSVIA FVGLISIVSMYGAVAVFLLYYLRFLGRHSWFLTLAISLSLPIGLFFFFEAVMLISMPQ GLSFTQPAFDLMYDIIY" gene complement(1933056..1934027) /locus_tag="SKA53_09769" CDS complement(1933056..1934027) /locus_tag="SKA53_09769" /note="COG3181 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12519" /translation="MKLTKRLFLALAASTTIATLPMAAFAEDWQPKRPIDFTIMAGAG GGADQIARFIQSVVEENSLTNRPLIPTNRGGGSGAESLLHLKDARDPDHTLMVTLNSF YTTPIRQEALGVDIETFTPIVMMGVDPFVLWVHKDSGITTFEDFVAKVRDMDGEFVMG GTGTGQEDSIVIAYMSGAYDLKVKYIPYDGGGAVAKDLAGQQIMATVNNPAEAKGFYE SGDFVPLLSFSDERMDAYPDVPTLKEMGHDFSYYNQRAVVGAPGMSAEAAAYYREIFG SVYDSEKWQGYLVSESLSPMVMDEAETRAYWATQVQNHRTLLSELNN" gene complement(1934147..1934998) /locus_tag="SKA53_09774" CDS complement(1934147..1934998) /locus_tag="SKA53_09774" /note="COG0589 Universal stress protein UspA and related nucleotide-binding proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:28402" /translation="MLKSILVPVRGDGMVATVLAHAAQLAKQHDAQVNVVHCRVQPQD LLPQGVPLNDFARKVMLEQAVELANRQEDHLRGILHRLAREFGLSEDASEAGTATCTF TEEPGRMADVVRHAGRLTDLIVLPKPQRENNLGPTSLKSALYGAGRPVLICPGQLQPD ATFAQHVAVGWNGSLPAARAVASSLDIVHAAKRVSILTGGKLQPHGPTAEELVAYYAI RGITAEIVHFDGKDPATALLATCKSIGASLLVTGAYSHSHETEMLFGGNTQRIVDDTE MPVLMAH" gene complement(1935543..1937228) /locus_tag="SKA53_09779" CDS complement(1935543..1937228) /locus_tag="SKA53_09779" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVDIKAHHLAESALSERRMTSVPPTPLGGASASAQKMLQTDRAT ASVQTAISIRAQIYQAVSALRSSLETLAGANESNKIAQPPVSGAPDGISRTALSSDPI TRPQGTSQIIVVRFAQYAQQGTILLPPAGPVKLSTGTTDHTVAIGAGNDSLQSLVQSL NGLSGLKAWLLQTRQGLALVVKSLPGTAHALQPASIKTILHVLQAALPPQGQPLVGSV DEIPATDGVAVEPRIVLTLQNHAYLRPKETIAALQLRVASLIREVNAIQTFLAGIVKR GVVSGTDISPQDGILAQTLLDRLRKITTRPVYGFASNPVLPADIGLDVGEDGLLTFNA GSFDRMSEDRLDLLAAMLGPDGNHDDMVPTPDIQAADLLKQGVYTLIYNPTQTPVMAT LDGFPLQLSHDPDGRPVLTLGAEDQHLAIVLPMDAPVAAKLVYRLSLFDQLAEITATT LSPDAPHLQSGTVHDIGVASAKRDDASVDNMILAVLAQAVDQSDMAQPAQSNTMPVQA AELLFYLLWIGLFVPRVDRDRRKKQHPERRPIPHGASVRIIWQSPPPSAQGDL" gene complement(1937419..1937913) /locus_tag="SKA53_09784" CDS complement(1937419..1937913) /locus_tag="SKA53_09784" /note="COG3544 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12871" /translation="MNTVKTLFATTLVATTFAFAAHAQDPVFQLPEQCNVVPAMGAMA HGAMGHGGMHGDQSGDMGSGMMGMMDMEDVDLESMPEHVQDNMRRMMISMPAMQDGMM NEDADVAFACGMIAHHQGAIDMAQVLIAHGKDPQMLALANQIIAAQVVEMEEMRNWLA ENAN" gene complement(1937948..1938160) /locus_tag="SKA53_09789" CDS complement(1937948..1938160) /locus_tag="SKA53_09789" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTSIGTTGHGLRLALLPVLLLIALFAGLPGDAALVMPVVSHVNH PVAPAVADTSGRHPAIIIPPPRAVLV" gene complement(1938157..1938354) /locus_tag="SKA53_09794" CDS complement(1938157..1938354) /locus_tag="SKA53_09794" /note="COG2608 Copper chaperone" /codon_start=1 /transl_table=11 /product="putative Copper chaperone" /db_xref="CDD:12125" /translation="MQFQIDKMGCGGCARSITATIHTLDPAADVVIDLPTKRVAVTSK ADGMAIEQALSQAGFPPRRIA" gene 1938705..1939283 /locus_tag="SKA53_09799" CDS 1938705..1939283 /locus_tag="SKA53_09799" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSLININTSAAKLNRPTGLRGLFYDIRSWVDGEVVTGNQLRDDQ LLFDTETASFDLIAPELIEDRTIYIVDQTGGTLYPKVSNVAATAKSFETFASLEDAAE AAMDKSHDSVALVLNIDLIVDMNDAVEQLIAVKLALPDVPVIICSRTFSKNNFSLQRR AIADASLRLPCTDVSLALAIESGILNNKNRRS" gene complement(1939349..1941928) /locus_tag="SKA53_09804" CDS complement(1939349..1941928) /locus_tag="SKA53_09804" /note="COG0642 Signal transduction histidine kinase" /codon_start=1 /transl_table=11 /product="multisensor hybrid histidine kinase" /db_xref="CDD:10512" /translation="MASATSIFLVPLKSRRFFVVAIVLFLLLTCILILFNAASLQQRL KTMRDTAAEAARAQLVDLDVIHGALVLAADGLLLARSDPELESQNGLARLNLLFDGFS QRVEAAMVLLSDPDLAPDLGEKLVALDAVRNALAERIDAIDPTDAHTILVVTTRLHAA AQIVQDITAATELYAVRTAEIAQQAERSFLRQLWIHNIVAIVAMLLVVAGLSLWRRVE GRAQRLSGILGKACDSAVDAIIVIDADGRILLTNQTVTRVFGVRGDDLAGHHIGALID MQDVQPTNAQPDDAAVTPPLITTGVMRVMARRSNGPSFPADLSVTADIDLDGRPIMIV FIRDMTAAAAAEDQLRIERLGAERNAAAKTAFLGMMSHDMRTPLQGMIAALDLLDQTG MDQVGRNLVQTARDCSLRALQQINDVLDMTRLNGQPQQKVLFDPTAIVAEILNELTPL AAGQNTQLALRVEQGDTPLPSFVGTPPAFVRAIYNLVGNAVKFTANGRVTVALSFRET SVGKFTLDVAVVDTGVGIALEKQESLFEEFKMLNGDRAHPREGAGLGLVIANAAVKQM NGALGLTSSPGEGSTFSFSIDLSTATASASAQTLSQPAAQNRHEKSLVGPRNILVVDD NAINLSLLAAVVRQLGHSVDEAKDGSIAVGLAAMRAYDVIFMDVNMPDMDGYTASRII RAGGPSCDAMIVAVTAYTNIHYSDEVRNAGIDGVLTKPTTQDEIAAVLDGYLPQETAP APTPVAGDPERTEVQRAITALSETLGDDNAIRLMKAGLTEVAELLDALDAHPDADDQA AAAIHRVVGSTAVLGFSGLSKTLCAAEQAANARDRQKLWSLLETVKSDSASLSRALAA HTA" gene 1942098..1942214 /locus_tag="SKA53_09809" CDS 1942098..1942214 /locus_tag="SKA53_09809" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRTKCLHPRNSATAGGARSFEKSVPAAVWAIILRDGSE" gene 1942618..1943232 /locus_tag="SKA53_09814" CDS 1942618..1943232 /locus_tag="SKA53_09814" /note="COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /codon_start=1 /transl_table=11 /product="two component transcriptional regulator, LuxR family" /db_xref="CDD:11904" /translation="MTRILVADDHRLIAESVSLSLSMSEGFDVEISDSLSSTLEKIIS EPPYSIVMLDLRMPGMDGINSIKKVVDAAGDANVVLFSANADTHTVARAIEVGVRGLV PKTLPLQSLGSVLRLIQSGQMFIPAENRITPGDARGQSLLSESELAVLQMAASGMTNK HIANNLDMNEARIKMHMRTICRKLGARNRAHAAMIGRDMGIVDH" gene complement(1943355..1943555) /locus_tag="SKA53_09819" CDS complement(1943355..1943555) /locus_tag="SKA53_09819" /note="COG2041 Sulfite oxidase and related enzymes" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRVIEPPHALQVFAVGTGATNLIYRDAVPFRFTPPWPRQLQLSL CRIAQSAASLAAADHDSTENMP" gene 1944099..1945688 /locus_tag="SKA53_09824" CDS 1944099..1945688 /locus_tag="SKA53_09824" /note="COG4166 ABC-type oligopeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter, periplasmic oligopeptide-bindingprotein" /db_xref="CDD:13433" /translation="MLSAIAANAQATHPVTGEALAEVQTFTYRVLDEHSSVDPQVVED VTGAEVVRDLFEGLMNQDAAGNLVPGVATGFEVSEDGLTYTFTLRDNARWSNGDPVLA SDFVYAWKRAVDPALASEYAWFMELMSIENAAAIIAGDMDKDALGVTAPDESTFVVTL SQPLPYFAQMTTHSTTFPVHPATVEEHGDTWTRPENIVSNGAYVLREHVPQERLVRVR NDMYWDNENTIIDEVTSLVINDANQGLTRYLAGELDRTEVPPGQYQRLSAEYPDQAIS IPRLCSYYYNFNLSEGGPEALQDVRVRQAMNLAVNRDVIVNNVLGAGQTAAYNFTPVR TAGFTLPDLPIADMTQEDRNAMAVALITEAGYGIGGEPLSIELLYNTDEAHRNIAVAL GQMWQQTLGIQTTLANQEWQTFLQTRGNQNFEMARGAWCGDYNEASTFLDLVTTNSGY NDAKYSNAEVDQLMAEAKTAADPQPNYTRVEQIIAEEVPIIPIYHYADGYMFNPELKG WPVDNVEQNWYSRELYKVAGE" gene 1945763..1946686 /locus_tag="SKA53_09829" CDS 1945763..1946686 /locus_tag="SKA53_09829" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="putative oligopeptide ABC transporter, permeaseprotein" /db_xref="CDD:10471" /translation="MFNFVLKRLAIAVPTILILIVLSFMLMFAAPGGPFNSERPLPPQ VLANLEARYGLDQPYWKQMYDYIVNVVTRFDFGPSFQYRDRTVTDVIMQGFPVTLTYG FWSFVVAVIVGVSLGVVAAIKHNTWLDYLAVGISVGAQVLPNFVMAPILVLVFTLWLG WLPGGGWQGGQWQYLILPVIALSTSYMASIARITRSSMLEVLNAGFIRTARAKGLPTW RIILGHALKPAMLPVLSYLGPAFVLMITGSVVIDVYFSTGGIGQFFVNSAFSRDYAVI MGITILVGVLTILFNLVVDVLYAWIDPKIRY" gene 1946697..1947623 /locus_tag="SKA53_09834" CDS 1946697..1947623 /locus_tag="SKA53_09834" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter, permease protein" /db_xref="CDD:10891" /translation="MYPDKTTGAALVDAAHLAEVQGRSLWKDARQRFMRNKAAVAGLV ALILITLFAFFGGLLAQWSAQEINWVMMGNVAQAGGPSIANGHYFGVDELGRDLYART VQGTRISLLVGFVGAAIAVIVGTLYGAIAGYFGGRTDGIMMRIVDILMAIPFMFVLIL MLVIFGRSILMLFIGIGLISWLDMSRIARGQTLTLKNKEFVEAAIAIGVRPMTIILRH IVPNLLGLVIVYATLLVPTMIITESFISFLGLGVQEPATSLGALISAGAGQMRYGVIW QLAFPLFFFIVTLFAFFFVGDGLRDALDPKDR" gene 1947625..1948593 /locus_tag="SKA53_09839" CDS 1947625..1948593 /locus_tag="SKA53_09839" /note="COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC oligopeptide transporter, ATP-binding subunit oppD" /db_xref="CDD:10318" /translation="MTLLQTKDLTVTFQTADGPVNAVNGVNFSIDKGETLAIVGESGS GKSQTAFAIMGLLARNGQATGQALFDGQDLLAMPQKALNTIRANDVAMIFQDPMTSLN PYIRISDQMAEVLTLHKGISKRAAIAQSVRMLDAVGIPDAKARISSYPHEFSGGMRQR IMIAMALLCEPRLLIADEPTTALDVTVQAQIMRVLADIRRDFGTAMILITHDLGIVAD ACDRTLVLYGGQIMEEGPTDDVFARPSHPYTAGLLRAVPRLDRDDDELLTIAGEPPDM SRLPAGCPFSPRCAAVMPHCPTVKPALESFDGTRRRACHLPIEEVA" gene 1948593..1949600 /locus_tag="SKA53_09844" CDS 1948593..1949600 /locus_tag="SKA53_09844" /note="COG4608 ABC-type oligopeptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter, ATP-binding protein" /db_xref="CDD:13764" /translation="MEPILSVQDLSVTFDIHPQGAWPWTKPQKLHAVNGISFDLAPGQ CLGVVGESGSGKSTLARAIVGTVPSSHGRIMFEAHDLASMSPSARRVHRKDVQMIFQD PLAALNPRMTVGDIIAEPLITHEPKVPRAKVRRRVQALMERVGLLPNLVNRYPHEFSG GQCQRIGIARALILKPKLLICDEPVSALDVSVQAQVVNLLRELQRDMGLSMIFIAHDL SVVKHVSDKVMVMYLGRTMELADSKPLTTGPRHPYSQALIASVPIPDPVLERARKRPV LEGELPSPLRPPSGCVFRTRCPKAQTICAEIRPPMTDADNGHMVACHFEQKQEMLVFA R" gene complement(1949607..1950302) /locus_tag="SKA53_09849" CDS complement(1949607..1950302) /locus_tag="SKA53_09849" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="ABC branched chain amino acid transporter, ATPase subunit" /db_xref="CDD:10284" /translation="MLKVENLTLHYGASQILWGVSLEAQAGAVTAVMGTNGVGKTSLL RAIAGRHPYSGGTITLDGQLLDHPRAAEAAQAGIAYVPQGREVFALLTVTENLQTGFA CLPRSAHKIPDRIYDLFPVLHQMRDRRGGDLSGGQQQQLAIARALIARPKVLLLDEPT EGIQPNIIKQIGKVIELLRDEGEIAIVLVEQYFDFAYSLADQFCVLNRGEVVLSQPAS AVTRDAILQRVSI" gene complement(1950306..1951043) /locus_tag="SKA53_09854" CDS complement(1950306..1951043) /locus_tag="SKA53_09854" /note="COG4674 Uncharacterized ABC-type transport system, ATPase component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, ATP-binding protein,putative" /db_xref="CDD:13816" /translation="MTLLEVSGVSVTFDGFRAINNLSIAIGEPELRAVIGPNGAGKTT FMDIVTGKTRPDTGRVLWGELSTDLVKLSESQIAKAGIGRKFQKPTVFEDQTVSANLS MALKNKRGPFAVLSWKATAADKARIVELAEEVGLADRLDHRAGDLSHGQKQWLEIGML LAQDPRLLLVDEPAAGMTPAEREHTTDLLKRAAQTRAVVVIEHDMEFIRRLDCRVTVL HEGSVLAEGSLDHVTKNQQVIDVYLGR" gene complement(1951040..1952215) /locus_tag="SKA53_09859" CDS complement(1951040..1952215) /locus_tag="SKA53_09859" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, permease protein" /db_xref="CDD:13442" /translation="MTTPNRSFLRDNPSVLWFMGLLGLFTVIVTILSEGMGAGVMSTN MVKILGMTLCLCLIAIAMDVVWGYCGILSLGHFAFFGLGGYAIGMWLMYARTEIVIRD NLAQGAIPATETEVAEAVASQIFGVVGSSDLPLIWTFAGSLPAQLALVVLVPGLLALV FGWLAFRSRVTGVYLSILTQAMTLALSLYLFQNDTGLRGNNGLSGLQNIPGALDVPQA VISVWFFWASALALGLGYVLFAWVVSGKFGSVIRAIRDNEARVRFLGYNVEAYKLFVF TITAVVAGIAGALYYPQAGIINPAQIAPIASIYLAVWVAIGGRGRLYGAVIGAAFVSL LSSWLTGGGAPNIELGPLRIIWTDWWLVLLGLGFVAVTLFFPKGIGGLFDYLVRRQP" gene complement(1952220..1954178) /locus_tag="SKA53_09864" CDS complement(1952220..1954178) /locus_tag="SKA53_09864" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="ABC branched chain amino acid transporter, inner membrane subunit" /db_xref="CDD:10430" /translation="MLRYLRAFALLWPLLVGPAMAQEPSATLLQDVLQSVQADVASPS RSTVPVVLRALLTADAPGTVDFLRAWSDREVYERPGDGLFFYAAPAAGELTLIDIDSG AEIATVGTRDVNQIRPNAGVRREIGAALVAFELTHPDPDRRIAALDAAARSPDPEQIA AIRAARATEADPAIAVRMDRLIALLVARFDPDSTTRIAAIEALRGDVSTPARSVLNQL LQTRADFAPTLPADVNVAVVKTPGDQITLAAAYDVLVSAGLAPAAPGRNAIRDVLRAN VTAGAVGGVPVHQLNTDANRIIAYQALQDAGTVSPLVTEADMAEAVAQYVFFDVYLEP DSAVTDAARAAQDSTTTKVALFQFLSLSFDALSLASIFFLAAIGLAITFGVMRVINMA HGEFIMMGAYTGYVVQTVIPDYTASLAVALPLAFAVTFLAGVVMERLVIRHLYTRPLE TLLATFGISIALQQLAKNIFGTQARPVTAPDWLAGAIQINDLVSVAAVRVGIFIMAAL FLLLLLYILNRTRLGLEVRAVTQNPGMAASMGINPDRINMLTFGLGSGIAGVAGVAIG LVAQVTSEMGANYIVQSFMTVVVGGVGSVFGTLAGAALIGSLQKGIEWFNPANTLAAQ TYMVLFIILFIQFRPKGIVALKGRAAGD" gene complement(1954245..1955525) /locus_tag="SKA53_09869" CDS complement(1954245..1955525) /locus_tag="SKA53_09869" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, periplasmicsubstrate-binding protein" /db_xref="CDD:10552" /translation="MMKKTLLAAAAVAALSTAANAQAACPIKVGVLHSLSGSMAISET TLRDVMQMLVAEQNAKGGLLGCELEAVVVDPASDWPLFAELTRQLLTVDEVDVIFGAW TSVSRKALLPVLEELNGLFFYPVQYEGQESSRNVFYTGAAPNQQAIPAVDYFIDELGV ESFALLGTDYVYPRTTNAILESYLLSKGIAPEDIFVNYTPFGHADWSTIVSDVVALGA GGKQVGVISTINGDANVGFYTELAAQGVSADDIPVVAFSVGEEELSGLDTSRLVGHLA AWNYFMSADTPENESFITAWHDFIGSTDRVTNDPMEAHYIGFNMWVNAVEAAGTTDVD AVREAMWGQEFPNLTGGMAVMNANHHLSKPVLIGEIRADGQFDIISQTPEVAGEAWSP FLTESATWTSDWQTLECGMYDTATSTCVQLTSNY" gene 1955833..1956945 /locus_tag="SKA53_09874" CDS 1955833..1956945 /locus_tag="SKA53_09874" /note="COG0798 Arsenite efflux pump ACR3 and related permeases" /codon_start=1 /transl_table=11 /product="arsenical pump membrane protein, putative" /db_xref="CDD:10666" /translation="MGVSLLAAWLTQHGGPSIAALCASKRGDPMPVFERFLSVWVALA ITMGIALGQVAPNFVSFLASLEYGSVNFVVAILIWAMVYPMMVAVDFASLARVHERPK GMIITLVVNWLIKPFTMALLGVVFFDYLFAPFIAPGTSGQYIAGLILLGAAPCTAMVF VWSQLTKGDPNYTLAQVSLNDAIMVFAYAPIVALLLGVTDITVPWETLVLSVVLYVVI PLAAGILTRVWLTRGRSDTGSVVAGFTAKVKPFSIIGLLATVVLLFGFQGGVILSQPF VIALIAVPLLIQSYGMFGLAYWAAKAWRVPHDVAAPCALIGTSNFFELAVAVAIGLFG LNSIAALVTVVGVLVEVPVMLTLVWFANRTRHWFAA" gene complement(1956942..1957760) /locus_tag="SKA53_09879" CDS complement(1956942..1957760) /locus_tag="SKA53_09879" /note="COG1414 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, IclR family" /db_xref="CDD:11129" /translation="MQHDIRKTRGRPKAWDDKAVQNTVKSLDRALEVLIALGEMQGGT LSEIATNLHQSPATVYRVLTTFQGRGFVDFDRQAQVWSIGAAAFLTGSQFLRRTSLVE RARPIMRDLMEATGETANLGIERDGNVLFLGQVETHATIRAFFPPGTVSAMHASGIGK ALLAHMDDARQRRVLAAGKLEQFTPHTLTNPEAMIADLHAARARGYAFDGEERNLGMR CIAATVHDVSGDAVAGLSVSGPTSRITDDKIAPLAQAVTEAAARLTAAIGGAPR" gene 1957923..1959113 /locus_tag="SKA53_09884" CDS 1957923..1959113 /locus_tag="SKA53_09884" /note="COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase" /codon_start=1 /transl_table=11 /product="serine--glyoxylate transaminase, putative" /db_xref="CDD:9950" /translation="MSFQNPVFIPGPTNMPESIRKACDMPTIDHRSPLFGQILHPARA NVQKVLKSANADVFIFPSTGTGGWETAITNTLSAGDTVLAARNGMFSHRWIDMCQRHG LDVQIVETPWGHGLPADRYAEALAADKGHKIKAVLATHNETATGVKSDIAAVRAALDA ADHPALLFVDGVSSIGSMNFEFDAWGVDIAVTGSQKGFMLPAGLAILGFSAKARAATK TAGLPRTFFDVNDMAKGYDNSAFPYTPPVGLMNGLLLASDMLLREGLDNVFARHTRIA SGIRAAVHAWGLELCAATPDLYSDTVSAIKTPAGFNATEIVNHAASAYGVAFGTGLGE VAGKVFRIGHLGSMTDVMALSGIATAEMCMVDLGLDIKLGSGVAAAQDHYRRTTGQAL QDAA" gene 1959113..1960096 /locus_tag="SKA53_09889" CDS 1959113..1960096 /locus_tag="SKA53_09889" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="putative threonine dehydratase" /db_xref="CDD:10889" /translation="MKDLDMYIPTYDDVIAAHARIAPHIHRTPVLTSSYLDDLIGAQL FFKCENFQKAGAFKVRGASNAVFGLSDADAARGVCTHSSGNHALSLSYAAGRRGIPCN VVMPRTAPDAKKAAVRGYGGIITECEPSTTSREEVFAQVQARTGGDFVHPYNDPRVIA GQATCSREFMEQTDGLDMMVAPIGGGGMISGTCLTLSHIAPEVQIIASEPQQSDDAYR SFKAGHIIADDAPVTVADGLKVPLKDLTWHFVSNHVTDIFTATEAEIIAAMKLTWERM KIVIEPSCAVPLATIIKNRDFFKGKRIGVIITGGNVDLDKLPWMQGEGSTT" gene 1960093..1961256 /locus_tag="SKA53_09894" CDS 1960093..1961256 /locus_tag="SKA53_09894" /note="COG3616 Predicted amino acid aldolase or racemase" /codon_start=1 /transl_table=11 /product="threonine aldolase, low-specificity" /db_xref="CDD:12940" /translation="MNDMSSLNNLDVGYDIPALPGMDEADIQTPCLVLDLDALERNIK KMGDFAKSHGMRHRVHGKMHKSVDVALLQEKLGGSVGVCCQKVSEAEVFARGGIKDVL VSNQVRHPAKIDRLARIPKLGARAICCVDDIANIADLSAAAQKHGTQIECLVEIDVGA GRCGVQYGAAVVVLAKAINAAPGLKYAGIQAYQGAMQHLDSYAERQTKTQIAIEQVRE TLDLLKAEGIESDIVGGGGTGSYYFESASGVFNELQCGSYAFMDADYGRILDKDGKRI DKGEWENALFILTSVMSHAKADKAIVDAGLKVQSVDSGLPLIYGRDDVTYVKCSDEHG VVADPGGVLKVNDKLKLVPGHCDPTCNVHDWYVGVRGGKVEVVWPVSARGKAY" gene 1961338..1962303 /locus_tag="SKA53_09899" CDS 1961338..1962303 /locus_tag="SKA53_09899" /note="COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog" /codon_start=1 /transl_table=11 /product="possible ornithine cyclodeaminase" /db_xref="CDD:12077" /translation="MIIVPEKEIAGLMTRADAYNAVEQVFASMSSGRAYNFPVIREAI GHADALYGFKSGFDRDGLALGLKSGGYWPGNEANGLTNHQSTVFLFDADTGKCRAIVG GNLLTALRTAAASAVSINHLARKDASVLGMIGAGHQSVFQLRAAVEQRSFDKIIGWNY HPEMLQRLAAVAAELGIPFEAVSLAQLGAEADVIISITSAFAPSLLDIHVRPGTHIAC MGTDTKGKQELEAAVLARATVFTDEVAQAVTIGEAQHAIAAGLITQDAIHEMGAVVNG THPGRTSPDEITVFDGTGVGLQDLAVASAVVDLAVAKGVATTVEF" gene complement(1962300..1962770) /locus_tag="SKA53_09904" CDS complement(1962300..1962770) /locus_tag="SKA53_09904" /EC_number="3.5.3.19" /note="COG3194 Ureidoglycolate hydrolase" /codon_start=1 /transl_table=11 /product="ureidoglycolate hydrolase" /db_xref="CDD:9674" /translation="MKDIRARPLTAAAFAPFGDVLNCDGAPDRIINAGLCGRFHDRAQ MDVGDGRAGISLFRSELRSLPYQLDLIERHPLGSQAFIPMSMDGFLVVVAAEDFVPQA FVTAPGEGINFHRGTWHGVLTPLSGPGLFAVIDRIGPGANLEEHHFETSYRITA" gene complement(1962767..1964146) /locus_tag="SKA53_09909" CDS complement(1962767..1964146) /locus_tag="SKA53_09909" /note="COG0726 Predicted xylanase/chitin deacetylase" /codon_start=1 /transl_table=11 /product="polysaccharide deacetylase family protein" /db_xref="CDD:12533" /translation="MTGHGAEPPAAHWPGGARIAVQIVLNYEEGGENNILHGDAASEA FLSEIVGAAAWPGQRHWNMESIYEYGARAGFWRLHRMLADLPVTVYGVATALARAPEQ VAAMQDAGWEIASHGLKWIEYKDAPEDVERADMIAAISLHKEVTGTPPRGWYTGRCSV NTVRLAAETGQFAYVADSYADDLPYWVEIGRHDQLIVPYTLDANDMRFATPQGFNAGA QFLDYLKASFDTLYREGGRMMSIGLHCRLIGRPGRAEALRQFIDYAQAHDGVWFATRA QIADHWTAQHPHQRFARPSQMGRDAFVAAYGGVFEHSPWIAAGAHGLELGPAHDTAIG LHNALCRVFRSAGDDARLAVLNAHPDLAGKLAAAKRLTSDSTAEQASAGLDALTDAER AAFQAQNAAYLDRFGFPFIIAVRDHDKPSIMAAFGARLQNDRASELAEACRQVERIAL HRLRGMLPR" gene 1964323..1965546 /locus_tag="SKA53_09914" CDS 1964323..1965546 /locus_tag="SKA53_09914" /note="COG3748 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:25054" /translation="MYDVAILWEWLAFAVRWLHVITAIAWIGSSFYFIALDLGLNRNI QGPADGEEWQVHGGGFYHIQKYLVAPEAMPDHLTWFKWESYATWLSGAALLAVVYWVG AELYLIDTAKADLEIWQGIVISAASLGVGWVIYDLLCKSPLGEKPTVLMLLLFALLVV MSWGYNQVFTGRAALLHLGAFTATIMTANVFVIIMPNQRIVVADLKAGRKPDPKYGKI AKLRSTHNNYLTLPVIFLMLSNHYPLAFGTQYAWIIAALVFLMGVTIRHYFNSMHARK GKPTWTWAVTVILFIVIAWLSTFPGHNTYEDAEARALTPYEQRFASAAGFEEAHDIVI GRCSMCHAREPVWGNMHWAPKGVFLETEADIAHHARAIYLQSGISHAMPPANITRLPD EDRATLAAWYRAATD" gene complement(1965645..1966328) /locus_tag="SKA53_09919" CDS complement(1965645..1966328) /locus_tag="SKA53_09919" /note="COG0036 Pentose-5-phosphate-3-epimerase" /codon_start=1 /transl_table=11 /product="Pentose-5-phosphate-3-epimerase" /db_xref="CDD:9911" /translation="MSFDRSIKIAPSILSADFANFGAECRAIEAQGADWVHVDVMDGH FVPNITFGPATCAAIRPHIKGVMDVHLMIAPVDPYIEAFAKAGADIITAHVEAGPHIH RTMQAIRGAGAKAGVALNPATPAAAVEYLLDMVDLVCVMTVNPGFGGQKFIHSQVEKV RQLRAMIGDRPIHIEIDGGVDPLTAPLVAAAGADVLVAGSAVFRGGSVSDPAPYGANI RAIRDAAKA" gene 1966447..1967280 /locus_tag="SKA53_09924" CDS 1966447..1967280 /locus_tag="SKA53_09924" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /db_xref="CDD:14970" /translation="MNAVLRHADILRANAQVHLTRATLTAERPRALHGHDFYELFWVQ NGKVRHHLPDGTQTLAEGSVVFLSPGQTHALQGRGEHALVVSLCLHPALVKALVDRHP SLAGHLFWSGKGIAQHHRDMRELAVLNHAAVQLERSRCDTIAAEAFLLPLCAELTTDI YPADAPDWLISACRAARQPTVFRDGATGLVALTGKAHPHVSRSMRKHFGMTPSDYINR IRMDHAARALTTDADSVGQIAADCGIPNMSHFHKLFRAAFGDTPLQYRQKLQRQVVQP S" gene 1967341..1968348 /locus_tag="SKA53_09929" CDS 1967341..1968348 /locus_tag="SKA53_09929" /note="COG0274 Deoxyribose-phosphate aldolase" /codon_start=1 /transl_table=11 /product="deoxyribose-phosphate aldolase" /db_xref="CDD:28139" /translation="MQEANLQTSTTPPAVAHLPQLHLARNEGTSLDLDWVMAVQANTS AIERRAASLPGRRSVKKDYQAAWLCKAISLMDLTTLSGDDSAGRVRRLCAKARQPVRA DILDALGMQGLTTGAVCVYHDMVATAVDALAGSGIPVAAVSTGFPAGLSPFHLRIAEI GESVAAGAQEIDIVISRRHVLTGDWQALYDEMREMRAACGDAHVKAILATGELGTLRN VARASLVCMMAGADFIKTSTGKEPVNATLPVTLTMIRAIRDYHDRTGVMVGYKPAGGI SKAKDALVYLSMIKDELGDRWLQPDLFRFGASSLLGDIERQLDHHVTGAYSAQWRHAI S" gene 1968394..1970709 /locus_tag="SKA53_09934" CDS 1968394..1970709 /locus_tag="SKA53_09934" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="aldehyde dehydrogenase family protein" /db_xref="CDD:10741" /translation="MKIKEIFTTMDYGPALESKAEALAWLAQHDNLVGHFIGGKWTPA RDDFATTNPATGEKLAGVTKGTSADIAVAVAAARKAQPAWAKSGHKRARVLYAIARLM QKHARLLAVMETLDNGKPIREARDIDVPLAIRHFYHHAGFAQLMQDELPDRAALGVCG QIIPWNFPLLMLAWKIAPALAMGNTVVLKPAEYTPLTAMVFADICMQAGVPAGVVNIV MGDGETGAALVAADVDKIAFTGSTDVGRKIREATAGTGKALSLELGGKSPYIVFDDAD MDSAVEGLVDAIWFNQGQVCCAGSRLLVQEGIADRFYAKLKARMDGLRIGDPLDKCID IGAIVDPVQLAQITAMVSANAEGETYQITAPEGCFYPPTLITGLSPASHLMQEEIFGP VLVATTFRTPAEAVEIANNTRYGLAASVWSENINLALDIAPKLVAGIVWINGTNMMDA AAGFGGLRESGFGREGGWEGLAGYTRPKASAKPIKRITAFASSDSSPADPLDRTTKLY IGGKQTRPDGGYSRAVFNPRGKLLGHVSEANRKDLRNAVEAMNAAKGWSKSTGHLRAQ ILYYIAENLSARGDELAKRLKDLTGKSGTAEVEQTIRALFTFAAWADKYDGKVHGVPI RGVALAMHEAVGNIAVFCGEATPLLGLVTPMAAAISMGNRVTLVTSAPFPLIVAEIYQ ILETSDLPAGVVNILTGDHSDLAGHAAKHHDIDAVWSFSGADISATIEKGSASNLKRT WVNNGTALTPTARDWLAAATEVKNIWIPYGE" gene complement(1970710..1971360) /locus_tag="SKA53_09939" CDS complement(1970710..1971360) /locus_tag="SKA53_09939" /note="COG0751 Glycyl-tRNA synthetase, beta subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MARVKFVFRLLVLAGVAMFLHYVLPQHDVVKVTSTEVIRTDLGS FNRIFFASGDSGSATPDTRDLRLINTQKQNTFLFGFIQRDTSRVMVYRNEDTGWIWPP YFKFNSADLQAEAANLTRGEDWVVVTHYGWRNRWLSIYPNAVGLRVVDSPDVTIIPWF NIVFFVFLLIAVVFLRAMWRQLWERAVDPVIDAATHHIDAAQADLAERRGRWFGRK" gene complement(1971369..1971644) /locus_tag="SKA53_09944" CDS complement(1971369..1971644) /locus_tag="SKA53_09944" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAFIKLVIFGFIALTVIYWSVAIYARSVRKERLEKSFDGAHPGN TDRAARDAFVTAGMTAYNASIRPKLVGLVYVVPTIVIGSIIYMINMN" gene complement(1971721..1972074) /locus_tag="SKA53_09949" CDS complement(1971721..1972074) /locus_tag="SKA53_09949" /note="COG2216 High-affinity K+ transport system, ATPase chain B" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNRMGNIISDGLFLPILILALLGFGVPRLIARLLPEGVFALLAN AAPSALVMCILSAAFFFGLYVWQGVPARDLLANGLRQNLVTFGGLGVIAAIIWAPIMV LSVAGLPRKWVDKTW" gene 1972169..1972513 /locus_tag="SKA53_09954" CDS 1972169..1972513 /locus_tag="SKA53_09954" /note="COG3450 Predicted enzyme of the cupin superfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24123" /translation="MPATIAQVTADGVTPEISRPSAEKLISGDPVFTTWNIEDADGLY AGIWQSTPGKWRVRYDEWEYFSLTAGKSIITPDGGTPITLTTGDSYIIRPGFTGTWEV VEETVKDYVIRL" gene complement(1972518..1973183) /locus_tag="SKA53_09959" CDS complement(1972518..1973183) /locus_tag="SKA53_09959" /note="COG1376 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11091" /translation="MDAGYNLPGIPSEYLQGVNRRVTGLYQGEAPPNSLDVDPYAKFL YHVRADGTATRYPVGVGRAGRSIRGRATMQFMRAWPGWTPTQNMLRTEPEVYGDFRAG IPGGLRSPLGARALYLFRGGRDTFYRIHGTNDLPSIGNSGSAGCIRLFNQDIIHLYNQ ITAPMPVLIRSPEESLRVDPENYDRGVELPPTMIAAEELIGPDAEAANRPPDLDALWM GMI" gene complement(1973487..1974692) /locus_tag="SKA53_09964" CDS complement(1973487..1974692) /locus_tag="SKA53_09964" /note="COG0006 Xaa-Pro aminopeptidase" /codon_start=1 /transl_table=11 /product="creatinase" /db_xref="CDD:28146" /translation="MTARPHFYKFHQGEKTLPFAAAEYEARLAGLRAIMDKAGVEAVL FTSMQNIAYYSGFLYCSFGRQYGLVVTPTDCVTISAGIDAAQPWRRSYGDAITYTDWD RSNYWRAVRSVTGLGKVLGYESDHLTVAIRLALRDNLQPARLVDLAAETMAQRMRKSP AELDLIRAGAAVADVGGYAIRDAIKPGVREIDVAMAGRDAMELEIAARFPQAEYRDTW VWFQSGINTDGAHNPVTSRKLENGDILSLNTFPMISGYYTALERTLFVGEADAASLAI WEANVAAHEYGMSLLVPGAICADVTAKINTFLADRDLLQYRTFGYGHSFGVLSHYYGR EAGLELREDIPTVLEPGMVISMEPMLTIPHGQPGAGGYREHDILFITEDGNEDITGYP YGPAFNIIA" gene complement(1974795..1975694) /locus_tag="SKA53_09969" CDS complement(1974795..1975694) /locus_tag="SKA53_09969" /note="COG0223 Methionyl-tRNA formyltransferase" /codon_start=1 /transl_table=11 /product="methionyl-tRNA formyltransferase" /db_xref="CDD:10098" /translation="MRIIFMGTPEFSVPVLDALVAAGHDIVTVYTQPPRPAGRGKKDR PQAVHLRALELGLPVRHPVGLRNPQAQTEFADLNADIAVVVAYGLILPQAVLDAPRLG CLNIHASLLPRWRGAAPIHRAIMAGDAQTGVCIMQMEAGLDTGPVLLREATDIAADDT TGALHDRLSAMGARLVVEALRRLPDLTPEPQPDEGVTYAAKIDKAEGRVDWAQPAATV ARQINGLSPFPGAWCDVAGERVKLLGAETADGNAAPGTVLDGFTIACATGAVTITTAQ REGKRAMPAADVLNGLSLGDRLA" gene complement(1975710..1976219) /locus_tag="SKA53_09974" CDS complement(1975710..1976219) /locus_tag="SKA53_09974" /note="COG0242 N-formylmethionyl-tRNA deformylase" /codon_start=1 /transl_table=11 /product="peptide deformylase" /db_xref="CDD:28279" /translation="MTHRAYVQWPHPVLRTPAAPVAAITDEIRALWDEMIVAMDTMPG VGLAAPQLGVGLALAVVDASTMRGQAVRMANPEILHSSVEFRDHEEGSPNLPGVWARI SRPRAVTVRFLNADGEVEERDFVGLWATSVQHQIDHLAGRMFIDRMTKVRRDMLIKKA HKIAAKAAI" gene complement(1976216..1976674) /locus_tag="SKA53_09979" CDS complement(1976216..1976674) /locus_tag="SKA53_09979" /note="COG0242 N-formylmethionyl-tRNA deformylase" /codon_start=1 /transl_table=11 /product="peptide deformylase" /db_xref="CDD:28279" /translation="MALDLRFDGDPVLRAVAEPVTAFDEDLALLVAEMLATMYAAPGR GLAAPQVGVSQRVFVIDTTWKDGDPDPQAFVNPQIIARSKTTATAVEACLSIPDRAFA VTRPIWVDMRWQDIAGDVQQGRFDGVAAICVCHEYDHLDGVLITDIGVAQ" gene complement(1976679..1977200) /locus_tag="SKA53_09984" CDS complement(1976679..1977200) /locus_tag="SKA53_09984" /note="COG0242 N-formylmethionyl-tRNA deformylase" /codon_start=1 /transl_table=11 /product="peptide deformylase" /db_xref="CDD:28279" /translation="MTIRPILIHPDPRLKKVTAPVASIDDDLRRLADDMLETMYEAPG IGLAAPQVAVMRRVIVMDCQKDAEATPEPMVLINPEIIWSSEATSVYDEGCLSIPEQY AEVTRPAEVEVAWLGLDGKPQRARFDGLWATCVQHEIDHLDGKLFIDCLGPLKRQMIT RKMQKLKREMARG" gene 1977300..1978472 /locus_tag="SKA53_09989" CDS 1977300..1978472 /locus_tag="SKA53_09989" /note="COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities" /codon_start=1 /transl_table=11 /product="aminotransferase, classes I and II" /db_xref="CDD:10887" /translation="MSFNTPIDRRNTNSSKWDLMEKLFGVAPDSGLAMWTADSDYQTA PCVLAAIDRARDHGVFGYGIDSTDYTDAITWWMQNRHGWTVDPDWIVSTQGLGNAIAL SLQLWSEPGDAAAIFTPVYHEFAHKITRAGRVVTTCPLVRDGDTYALDLDDAKTRLTG REKLLIWCSPQNPSGRVWTTAELRAVAAFARDNGMLLISDEIHHDLVYRDHDFVPMAV AAPDFADNTVYLTAASKTFNIAGQRTGNMIIPNADLRAQAQTWQAMMDYKPGSLAIAM ITAAYSAEGAAWADAQMDHLQANRDLFQDGLRAIPGVWSMPLQSTYLAWVDFSGTGMD HTQIAARIRDDAKIAVSPGPAFGSGGENFMRINFATQRHVVEDAVQRLQHAFRDLQ" gene complement(1978480..1978833) /locus_tag="SKA53_09994" CDS complement(1978480..1978833) /locus_tag="SKA53_09994" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MYTFLPEAVRQGLEDARKAALRRKDRLSVRDGDATHRIRRLWDG GFALDLKGSDKLRGHVDIYDGPKHLYQCLVVSAVADDEERVFEFKWLTPVADRPAADF VHPDFVPAGLLEKRG" gene complement(1978928..1979698) /locus_tag="SKA53_09999" CDS complement(1978928..1979698) /locus_tag="SKA53_09999" /note="COG2875 Precorrin-4 methylase" /codon_start=1 /transl_table=11 /product="precorrin-4 C11-methyltransferase" /db_xref="CDD:12227" /translation="MTVYFIGAGPGDPELLTLKAARVIGECPVCLYAGSLVPEAVVAC APADALVLDTAPMTLDDTHAVILQAHAKGQDVARVHSGDPSLYGAIAEQIRRLKADGI DYQIIPGVPAYAAAAAALGTELTVPEVAQSIILTRMSMKSTGMPAGETLENFARSGAT LAIHLGIRALREIERQLVPFYGADCPVAVIYRVGWPDQLILRGTLSDIHAQVRVAKIT RTALILVGPALSENHGFPDSALYDAAKPHVLRPRVKAD" gene complement(1979740..1981551) /locus_tag="SKA53_10004" CDS complement(1979740..1981551) /locus_tag="SKA53_10004" /note="COG2073 Cobalamin biosynthesis protein CbiG" /codon_start=1 /transl_table=11 /product="Precorrin-3B C17-methyltransferase region" /db_xref="CDD:10739" /translation="MAVKPVVLALSASGEAVAHRVAAVLGAQVHGRKGRVAKADTFFA NALDHARDLFAAGVPVVGVCAAGILIRAVAPLLADKRAEPPVIAVSDDGAVVVPLLGG HRGANRLAAQIARALGAVAAVTTAGDVALGVALDEPPSGWRLVNREDAKGAMAALLSG GGARVLGDAPWLADLPAGDALRLSCTIKAQFDLGVDHLQFAPQRLTLGLGCARDCDPA EMAALVAEVLAEAGVAAEAVQSVNTITLKADEPAIIDLARTLDVPLRLFEAAELEALT PRLATPSDVVFAEVGTHGVAEAAALAQAGAQATLLIAKRKTANATCALAIAPAPITVL AGRGRGRLSVVGIGPGQAAWRTPEVSRLVAEAEELVGYGLYIDLLGPLAIGKQRSDFP LGGEEDRCRYALEQAGLGKNVALVCSGDAGIYAMGALVFELLDRSADQMGVSDAARRV EVVCSPGVSALQGAAARAGAPLGHDFCAISLSDLLTPRGDIIKRLQAAAIGDFVIAFY NPVSLRRRTLLAEARDILLRHRPAETPVMLASSLGRPEEHIRYRRLDQLDVDEVDMLT VVLVGSSHSRLAQLGTGPRMYTPRGYARKIDGDLAAG" gene complement(1981542..1982246) /locus_tag="SKA53_10009" CDS complement(1981542..1982246) /locus_tag="SKA53_10009" /note="COG2243 Precorrin-2 methylase" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis precorrin-2 methyltransferase" /db_xref="CDD:11949" /translation="MVTGVLYGVGLGPGAPDLITLRAARLIEGAAVVAYPTLAGAASF ARAIAADLIAPDAREIVMDVPMSVERAPAQAAYDAGAVQIAAALDAGQDVVCLCEGDP FFYGSFMYLFARLSGRYRVEIVPGVTSITACAARAGRPLVARNERLTVLPGPLPEEEL RARIDGAESVVIMKVGRHLTKIRTVIADLGLTDMAVYVERATLPDEVVLPLADAPAAA PYFSMILLTKGADPWL" gene complement(1982290..1983492) /locus_tag="SKA53_10014" CDS complement(1982290..1983492) /locus_tag="SKA53_10014" /note="COG2241 Precorrin-6B methylase 1" /codon_start=1 /transl_table=11 /product="CobL, precorrin-6Y C5,15-methyltransferase" /db_xref="CDD:11947" /translation="MSDAWLHIVGIGEDGMAGLVPATRAVVEAAEVIIGGDRHHVLAE NLTAERLAWPHPFDALISTIRGLQGRRVVVLATGDPLWFSVGARIGRAIDPAQIVYHP QLSAFQLAAARMGWSLPDVETLTVHGRPVEQMIAFIQPDARLLILTTGAETPAQIAAF LAARGFGQSRMTVLAAMGGKDEARFDGVAETWAHDVPAFNTLAVECIAAPDAALLPRV PGLADELFQSDGTMTKQEIRAVTLAKLMPMRGALLWDIGCGCGSVAIEWMRAARYARA IGIEPRADRRAFAAANALALGAPKLELIDGMVPQALHGLDAPDAIFIGGGLSRETFNA AWAALRPLGRLVANAVTLESEAELIALHKTHGGDLVKLSVHRAEPVGRLTGWRPLMPV TQWSLVKR" gene complement(1983485..1984135) /locus_tag="SKA53_10019" CDS complement(1983485..1984135) /locus_tag="SKA53_10019" /EC_number="5.4.1.2" /note="COG2082 Precorrin isomerase" /codon_start=1 /transl_table=11 /product="precorrin-8X methylmutase" /db_xref="CDD:3077" /translation="MKGPILRPYETDPKAIYTQSFATVRAEARLDRFAADLHPLMTRL IHACGMVEIVDRLAYSEQVVVAGQQALRAGAPVLCDCEMVGAGIIRRYLPAGNDVIVT LNDPAVPALAAKIGNTRSAAAVELWQDRIAGAVVAIGNAPTALFHLLELLDAGWPKPA VILGFPVGFVGAAESKAELARDPRGCDYIALRGRRGGSAMASAAVNALAAGLPEDV" gene complement(1984187..1985428) /locus_tag="SKA53_10024" CDS complement(1984187..1985428) /locus_tag="SKA53_10024" /note="COG2138 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11846" /translation="MKSGHDRPSQRRRENSVKTGVMICGHGSRSQSAVDEFAVLAEKL PAYLPDDWVTDYGYLEFANPVIRDGLDRLRAAGCDRILAVPGMLFAAMHAKNDIPTVL NTYAAKHGLAVNYGRELGIDPKMIAAAAGRVQEAVDRANVKYGALPVAETCLVVIGRG ASDPDANGNVAKIARMIQEGMGFGWCEVGYSGVTFPLVEPCLQHAARLPYKRIIVFPY FLFSGILIDRIYGFTDQVAAEHPGIQFVKAGYLGDHPKVLETFAERILEQDSATPPPN CGICGYRAQMLALEDGHNHTISAADRSHPAFGAVPPATCVLCKYRTQVLGFEGEVGAL QESHHHHVEGQGASAPGSNVADCKLCTTFCTGMCRLVVQDQHDHHHHHGHDHDHDHHH HAPYPHAKHPHGPESARKTKP" gene 1985680..1986528 /locus_tag="SKA53_10029" CDS 1985680..1986528 /locus_tag="SKA53_10029" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNDWYLILMIWGDAYSDADCNRLIRNAHMHSPSLKGAIVLSDRV DRDLDPRAIQCRISPDFDRSDFKKNGLAVKISLFEIDVLPPGARCVYVDLDSVIIGDL GKVAALTLSAPLWTLPTPRARLDAWSRLRWRLSRGRRYGAGNSSVFAYRNAFPGNPTA KFRNKTTVFGQAASDDIRSNDDRFIGWSCQDVIRPLPTQLAVRFRIEFLEVTFWMNRI KARYRRKARQSLVVVTFDGALTKPAVIAALRDGAVIADHHGRRARWTDLEMSGLRQTM QDALQD" gene 1986609..1987604 /locus_tag="SKA53_10034" CDS 1986609..1987604 /locus_tag="SKA53_10034" /note="COG0435 Predicted glutathione S-transferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10309" /translation="MQQRSIIMGQLVDGIWHDVWYDTKTSGGKFERTEASFRNWITAD GSAGPSGTDGFPAESGRYHLYVSYACPWAHRALIFRALKGLEDHISISAVHPDMLGEG WSFQKDDNGATGDTLFGYDYAREVYLRALPDMTGRVTVPILWDKQRETIVSNESSEII RMFNSAFDAITGNSDDYWPLALRDAIVPVNDRIYDTVNNGVYKSGFATTQQAYEDAVY PLFDSLDWLEDRLGKSRYLMGDRLTEADWRLWTTLLRFDPVYHLHFKCNRKRIADYPN LSGFLRDLHQIPGIAKTVNMDHIVRHYHYSHDTINPNRIIPINPVIDLSQPHGRA" gene complement(1987570..1987959) /locus_tag="SKA53_10039" CDS complement(1987570..1987959) /locus_tag="SKA53_10039" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="response regulator" /db_xref="CDD:10613" /translation="MHVLIIHGNGGLAATWQRHLEMLDAQVTQARTSVAALAALETII FDVIVLDVMLDGCSALAVADMAQFRQPWANVVFVTDTTVFSDGSIFGYSGNARAFIQT ATPPNDLAAIVHYYGSLRPDRAAAKDR" gene 1988067..1988516 /locus_tag="SKA53_10044" CDS 1988067..1988516 /locus_tag="SKA53_10044" /note="COG5469 Predicted metal-binding protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14553" /translation="MYLSSDLADHAIIRLKGVDHDGRQKMTTWITICDTCKREGWDSG TMAQTDGEALAGLIEAAASGLAGVKTRRVSCLMGCKSGCNITIQAPDKLNYTLGDFTP DTDAAAGIVAYAQAHAQSPTGQVPFRDWPQSIKGHFVTRHPPLPASE" gene 1988513..1989448 /locus_tag="SKA53_10049" CDS 1988513..1989448 /locus_tag="SKA53_10049" /note="COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase" /codon_start=1 /transl_table=11 /product="cobalamin biosynthetic protein CobC" /db_xref="CDD:9954" /translation="MTVARDHGGGLDAAIARHGGSRATWLDLSTGINPVPYPLPQFPA DAWTALPDKAAFARLHNLARGFWRVPQDATILAATGASAIIAALPRVFAQGEVCIPGP TYNEHEAAFRAAGWTIGTVPRHALVAVHPNNPDGAIWSAPDFTTQVTIIDESFCDVLP ERSLVHLASRPNTVVLKSFGKFWGLAGLRLGFAIGDPAVVARLAEILGPWQVSGPALN IGAEALADLQWADTTRARLVQDAHRLDQLVTAKGAKLLGGTSLFRLYRVDDAAAWQDR LAQGHVWSRIFPYAGDWLRLGLPAPDRWAQLEAAL" gene 1989445..1990338 /locus_tag="SKA53_10054" CDS 1989445..1990338 /locus_tag="SKA53_10054" /note="COG1270 Cobalamin biosynthesis protein CobD/CbiB" /codon_start=1 /transl_table=11 /product="cobalamin biosynthesis protein CobD" /db_xref="CDD:10986" /translation="MTLFFGMILDALFGEPKWLWSRYPHPAVLMGRLIGWCDLRFNAG PARQGKGIAVLTGLVVGAGLFGLILDALPGTIIDILIVAVLLAQKSLADHVRAVGNAL RLSLGDGKRAVAMIVGRDTQAMDRPAVARSAIESAAENLSDGVIAPAFWFLIAGLPGL LIYKIVNTADSMIGYRTPCHAEFGWAAARFDDLINLIPARLTAAMIWAVTSRPDPRGI LADAPLHRSPNAGWPEAAMAHGLDIALSGPRSYDGQLRDYPFVNGGGEHDLTPDDIDR AVGVLWKTWAVMLILALITTA" gene 1990426..1991595 /locus_tag="SKA53_10059" CDS 1990426..1991595 /locus_tag="SKA53_10059" /note="COG2951 Membrane-bound lytic murein transglycosylase B" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12298" /translation="MRLALAAALTLLTGAATAQTCGGDVGSFIAGVKAEAVATGIPAA TADAFFAGAQIEQSVLNADRSQGVFQQDFIQFSRNLISQNRIDNGTRNSQRFDSTFRA IENRFGIPRGVLLAFWAFETDYGAVQGNFNTRNALLTLAHDCRRPDLFRPQLIAAIEL YRRGGMDPATTLGAWAGEIGQLQKLPREIVEKGMDGDGDGLVDLKNSAPDALTTGANV LSSLGWRPNEPWMHEITVPANLDWSQTGLTNKRPVSDWAAMGVTARQGSLGPANLPAA ILLPMGRNGPAFMTYPNFDVYFEWNRSFVYVTTAAYFATRLSGAPVYNAGNPSPALTG DQMRLLQERLTARGYDVGGIDGILGAMTRNAVQAEQARLGLPADAWPTLDLLNRL" gene complement(1991640..1995095) /locus_tag="SKA53_10064" CDS complement(1991640..1995095) /locus_tag="SKA53_10064" /note="COG1196 Chromosome segregation ATPases" /codon_start=1 /transl_table=11 /product="SMC protein" /db_xref="CDD:10914" /translation="MRFSKLRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEAL RWVMGEHRASAMRGGGMEDVIFAGAATRPARNFAEVSLIIDNAERLAPAAFNDADQLE IVRRITRDAGSAYKVGTKDVRARDVQMLFADASTGAHSPALVRQGMIAELINAKPKSR RRILEEAAGISGLYQRRHEAELKLKGAETNLTRVDDVIDQLAAQLAQLARQARQAARY REIGESLRRAEGMLLFRRWQEADDALLEATNLLRDRTTAAAQAERAARDATKARQGAE DALPPLREEEAIAAAVLQRLQVQRDALQDQEARARDMIATLRARIDQLTRDIDREAGL NKDAGETIARLEWEAREIAKAGEGHDARLEAAQGAAREAAGVLQEAEAASAQLTEDVA RLAARHQSTQRLIDDHRATLTKNEAEAAKSKAASQDAATALARAEADFAAAGLAEAAA LASADAAEDALAAAEAARAATQTQESEARALRSEAEGGANALRAEVTALSRLVDRDRA EGGQVLDLLSVQKGYEKALGAALADDLRAPAVGADAPTGWASLPDYAQAQALPAGVAP LADVVTVPAVLARRIAQIGLVDAADGARLQAELQPGQRLVSLAGDLWRWDGFRSGAED APSAAALRLQQLNRLAELQRDLDAAAAKAQQAAAAHDALTRALQDCTVVDQAARAARR DADRAVADANRAASRAEADRNLSQGRLESLGLALRRIEEEAMGARKALAEAEQAAAAL GDLAAARASVEDVKMTVEAARITMMSRRSASEELRREGDARLRRAQEITKEISGWKHR LETATKRSAELADRKAASEAELAEASAAPEEIAAKRAELADAIATAETRRRAAADRLA EAETLLRDAGHAEREAERLASEAREARARAEARADAARETIAYAAERIMEAQEVTPAQ LLDALGVPVADMPPVATVEAEVNALKRQRDALGAVNLRAEEDAKGVQVEHDALVREKA DLLAAIAALRTGIASLNKEGRERLLTAFEQVNDSFGLLFTHLFGGGEAKLVLVESDDP LEAGLEIMCQPPGKKLSTLSLLSGGEQTLTALALIFAVFLANPAPICVLDEVDAPLDD ANVTRFCDLLDEMCRRTDTRFLIITHHAVTMSRMDRLFGVTMGEQGVSQLVSVDLKRA AAMVA" gene 1995641..1996282 /locus_tag="SKA53_10069" CDS 1995641..1996282 /locus_tag="SKA53_10069" /note="COG2370 Hydrogenase/urease accessory protein" /codon_start=1 /transl_table=11 /product="hydrogenase accessory protein" /db_xref="CDD:12042" /translation="MKRILTIAGLSLAASPAFAHHPLGGLPMETFTHGLLSGVGHPVL GFDHLFFVAAMGIAATFTANRLLTPAAYIGAMLAGCVLMYAGIAMPLAETMIVLSLLV VGGIVLSGKGLTTTTALMVFAAFGLFHGSAFGGSIAGQEGGVGGGVLVGYLIGLGAIQ YLIAIGAGWATRKLGATDASAVTARLGGAMVAGVGVFLALEIIEGPIVAALVG" gene 1996358..1997431 /locus_tag="SKA53_10074" CDS 1996358..1997431 /locus_tag="SKA53_10074" /note="COG0523 Putative GTPases (G3E family)" /codon_start=1 /transl_table=11 /product="cobW protein, putative" /db_xref="CDD:24627" /translation="MPAKIPATIVTGFLGSGKTTLIRHMLQNANGKRIALIINEFGDL GVDGDILKGCGEEVCSKDDIVELSNGCICCTVADDFIPTMEALLARNPAPDHIVIETS GLALPQPLVRAFNWPGISTRVTVDGVVTVVDGRAVQDGQFAHNIAAVDAQRAADDNLD HETPLSELFEDQIACADMIVVNKTDLLTAEEADSLAAQLRTDSRDGVQVVKTSMGALP VDVLLGQGIGAEGDLESRHEIHHHHHHHDDDEDDHEDDDHHHDHGHDEFESFIVTRDE VSDAAAFAAQVSAVIKSNNILRLKGFVAVTGKPMRMTLQAVGPRVDTYFDQPFGDAPR QTRLVVIGEAGLDQSAITAALQA" gene 1997428..1997877 /locus_tag="SKA53_10079" CDS 1997428..1997877 /locus_tag="SKA53_10079" /note="COG0454 Histone acetyltransferase HPA2 and related acetyltransferases" /codon_start=1 /transl_table=11 /product="acetyltransferase, GNAT family" /db_xref="CDD:25558" /translation="MIIVGITDPHDAQATALLQQSHALMQALFPPEDNFYLSIDDLVA SDIHFYTGRIGDVILGTGALRVCDGYGEIKSMFVDEAARGKGVADAILRQIEDQARSL SLPLLKLETGNILHAAHKLYARHGFTPCGPFGDYPETASSVFMEKRL" gene complement(1997880..1998041) /locus_tag="SKA53_10084" CDS complement(1997880..1998041) /locus_tag="SKA53_10084" /codon_start=1 /transl_table=11 /product="cobaltochelatase" /translation="MDYNAAGAPKMAKKGPKHEEHNAPGSKKKPFGARPDKAELLARM KKAAEEKKG" gene 1998089..2001802 /locus_tag="SKA53_10089" CDS 1998089..2001802 /locus_tag="SKA53_10089" /note="COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases" /codon_start=1 /transl_table=11 /product="cobN protein" /db_xref="CDD:6764" /translation="MHLLAATPGAISDGTEPVDLGQTPANVVIISAADTELAALAEAR AEMPDPPTLRLANMLHLAHPMSVDLHLDDCATKSRLVIARILGGAGYWKYGLTQYAAR LHDAGVPVAFLPGDDKPDPELRGLSTVSGTDYDALWSYLVEGGPQNNINALAYAKAML DGSDKPSAAAPLLRAGIYWPGAGIADLTTAQAAWTPDAPIVPIIFYRALVQGGGLNPI NRLTRSLSRAGLNPLPIFVASLKDPVSTATLDHIFTVTPPDVILNCTAFAVGSPHDGD DSPQNPLLANNAPIFQVILSGASEASWAEGLHGLTARDIAMNVALPEVDGRILSRAIS FKGEAFFDDATQCPIATYQARGDRVDFVTQLTANWARMRHTPAKAKKVALILANYPNK DGRLANGVGLDTPAATIHTLNLLTQAGYQTDPPADSATLMAQIMAGPTNWLTDRADKQ GGVFLPLETYRQHFDALPWDIKEQITTRWGAAEDDPFFALSELLPPEAPSRASGAGFA LSIHRFGNAVVGLQPARGYNIDPTDTYHSPDLVPPHNYLAFYFWLRHHWEADAIVHMG KHGNLEWLPGKAVALSETCWPEAVFGPTPHIYPFIVNDPGEGTQAKRRACAVIIDHLT PPLTRAESYGPMRDLEALVDEYYEAAGVDPRRVTHLRREILSLSEATGLSRDVGFTGD NNTDLGKLDSYLCELKEAQIRDGLHIFGQSPTGQQEIDLAIALARVPRGNGKGHNASL LRALAEDLGISIDPLDCDMAAPAPEKPDALADGTTWRTNGDTVERLENLSQRLVRDGG RGVVGFTPRASQAVVQTIRDDILPTIRACGPAEGTALLTALAGHFVAPGPSGAPTRGR LDVLPTGRNFFSVDSRAVPTPTAWALGWKSANLLIEKHLQDHGDWPRSMLITAWGTAN MRTGGDDIAQALALMGVKPTWDSANRRVTGFDVLPQTVLGRPRVDVTLRISGFFRDAF PQLIALVDSAARAVQALDEPADLNPAAARSQAGEDATRVFGSKPGAYGAGLQALIDER IWSDKSDFAAAYIAWGSYAYGAKASGARAEAAFKQRLSQVEAIVQNQDNREHDILDSD DYYQFEGGAAAAVSTLQGRERPIYHNDHSRPERPVIRTLDDEIGRVVRSRVVNPKWID GVKRHGYKGAFEIAATVDYLFAFAATTGAVRNHHFDLVEAAFLADDATRDFIADANAP ALREIAQRLQEAIDRNLWQPASNSARARIAGLL" gene 2001824..2002432 /locus_tag="SKA53_10094" CDS 2001824..2002432 /locus_tag="SKA53_10094" /EC_number="2.5.1.17" /note="COG2109 ATP:corrinoid adenosyltransferase" /codon_start=1 /transl_table=11 /product="cob(I)yrinic acid a,c-diamide adenosyltransferase" /db_xref="CDD:11817" /translation="MTDDPDRHAMKMAKKKAARDKIMATKTDQKGLIIVHTGKGKGKS SAAFGMIFRCIAHNMKCAVVQFIKGGMSTGERDLILAKFSDTCAFHTMGEGFTWETQD KSRDTEMAQAAWAQAKELIVDDTNSMVLLDEINIAIRYDYVAIADVVAFLRDHKPPMT HVVLTGRNAHEDLIELADLVTEMELVKHPFRSGIKAQIGVEF" gene 2002503..2003174 /locus_tag="SKA53_10099" CDS 2002503..2003174 /locus_tag="SKA53_10099" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGASVLQLSDMVATGVQRAVYLHPLDPTKLIKVLRPAGSVPRRT NFNGIMDRLLPGTRLRQIHKEYTEYLRVMLNHPEPDFHTPIAHMFGFSQTSEGLGCIT ERVMEPGRQVGETLGAKAAAGTLTPAHIAMLNDTVQRIYASDIRASDMNPNNFVFGQR DNGTGPGPEECVLVDGFGDIHAIPVRSMARWSNRMGLDDSCKRLARNAKLHWDAKARE FALPR" gene 2003204..2003668 /locus_tag="SKA53_10104" CDS 2003204..2003668 /locus_tag="SKA53_10104" /note="COG4405 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25044" /translation="MTDHRDSPERNAMTDDTEDLQDTYPGAGTFRFGDTPELCQYLIG LVRQRKKTATCGAAADFADDPDSMPVVGRCDIAANWDGTPALVIRTTKVQQIRFCDVT EEMALAEGANDSLLGWRKDHKAYFKRNGGFDPEMMLVFEHFTLVEDLAGREL" gene 2003670..2003852 /gene="pheT" /locus_tag="SKA53_10109" CDS 2003670..2003852 /gene="pheT" /locus_tag="SKA53_10109" /EC_number="6.1.1.20" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase beta subunit" /translation="MRLWIACLLVMIIGAHIAMWTSDMPRDLALRLTLINAAGWAVIL LPAWAVSKWAAAHKHR" gene 2003939..2006335 /locus_tag="SKA53_10114" CDS 2003939..2006335 /locus_tag="SKA53_10114" /note="COG0073 EMAP domain" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase, beta subunit" /db_xref="CDD:9947" /translation="MKFTLSWLKHHLETDASVDLIAETLTDLGLEVEGVENPAERLAD FTIGYVESAEKHPDADKLRVCQVQTKDGLTQIICGAPNARAGITVVIASPGTYVPGID TTIGVGKIRGIESHGMMCSEREMELSEEHDGIIELPSGTVGQTFTDWLAQNQPEKVDP VIEIAITPNRPDALGVYGIARDLAARGLGTLKPLTIDPVPASFTADLSVSIDDDTHDG CPVFCGRLIRGVKNGPSPAWLQTQLRAIGLRPISFLVDVTNWFTYDLNRPLHVFDADK VQGDLRVHRAKGGETILALDDKTYTLQAGQIAISDDHGVASIAGIMGGDATGCTDETV NVFVESAYWDPIQIAYTGRALKINSDARYRFERGIDPAFTPEGLEHAVRMIVDHAGGE ASELIIAGAVPDTSRAYRLDAQRLISLVGMDIPESTQRQTLTALGFRLEGDMAHVPSW RPDVQGDADLVEEVARIASLTKLQGKPMPRMDAGVPKPILTAGQQRQQSARRTMAALG YNECVTYSFVDAQAATLFGGGDDATMLENPISSELSHMRPNLLPGLLRAAARNQARGF MDMALFEVGAGFHGGEPGEQHNLITGVLIGKTASKDVHGTSRAVDLYDAKADAESVLA AIGAPAKVQILRGAADWWHPGRHGMICLGPKKVLAVFGELHPKVLREMDIKGPAVGFT IWPDEVPVPKSKTNTRPALVATDLQAVERDFAFVVGADVEALTLVNAALGADKALITD VRVFDQFIGGNLGEGKKSLAVTVRLQPTTTTLKDADIEAVSAKIVDKVTKATGGILRG " gene 2006392..2007024 /locus_tag="SKA53_10119" CDS 2006392..2007024 /locus_tag="SKA53_10119" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="methyltransferase, UbiE/COQ5 family" /db_xref="CDD:11933" /translation="MIDSAIFWDRAAEKYAASAIGNPAAYQYTLGRTRGYLRPTDHVL EIACGTGSTAVLLAPDVASYLATDVSPEMIRIARGKLPVKAADLRFDVAGELPETGPF DVVLAHSFFHLVPDMERRMAQIFDLLTPGGYFISKTAALKGRSLKWTLIGAVIPLVQM LGKAPFLRKFTVQELEGAICAAGFEIVESGDFAIPARYIVARKPGVASGG" gene 2007062..2007520 /locus_tag="SKA53_10124" CDS 2007062..2007520 /locus_tag="SKA53_10124" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTLHIYLSGEIHTDWRDQIIAGAADLDVVFSGPVTDHAASDDCG VAIMGAEAQKFWHDHKGAKLNAIRTRHGIETADIVVVRFGDQYKQWNAAFDAGYAAAM GKSLIVMHGPDHQHALKEVDAAALAVVETPQQVVDVLTYVLHGSLPDRQG" gene 2007609..2008028 /locus_tag="SKA53_10129" CDS 2007609..2008028 /locus_tag="SKA53_10129" /note="COG1970 Large-conductance mechanosensitive channel" /codon_start=1 /transl_table=11 /product="large conductance mechanosensitive channel protein" /db_xref="CDD:17034" /translation="MCRTIQPEEQIMLNEFKDFIAKGSVMDLAVGIIIGAAFTAIVSS LVNDLIQPLIGLIIGGIDFSGLSFGLGDAQFMYGNFITATINFLIIAFVVFMLVKAVN RVKSIADKPDDIAPEVHTGPSELDILIEIRDALAKRP" gene complement(2008065..2009183) /locus_tag="SKA53_10134" CDS complement(2008065..2009183) /locus_tag="SKA53_10134" /note="COG0686 Alanine dehydrogenase" /codon_start=1 /transl_table=11 /product="alanine dehydrogenase" /db_xref="CDD:10555" /translation="MLIGCPKEIKPQEFRVGVTPDAAQEAVAHGHKVMIETGAGIGAG FSDDDYSAAGAQIAGTAAEIFASADMIVKVKEPQPVERKMLRAGQILFTYLHLAPDPD QTRDLMASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLM GGVPGVGPAQVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDTFGGQFKTS YASKANTIALARAADMIIGAVLIPGAAAPKLISRAQLAELKQGAVLVDVAIDQGGCFE TSRATTHQDPIYDVDGIMHYCVANMPGAVARTSTIALGNATMPFMLALADKGWRQACE DDPHLLAGLNVHAGRLTYYAVGKALGIDVLSPALALKA" gene 2009318..2009776 /locus_tag="SKA53_10139" CDS 2009318..2009776 /locus_tag="SKA53_10139" /note="COG1522 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AsnC family" /db_xref="CDD:11236" /translation="MDLDSIDRRILAVLQKSGRISNADLSEVANLSPSACHRRVQRLE KDGYIREYVALLDPRKMGRPTTVFVEITLSGQADEVLDAFEKAVAKVPDVLECHLMAG TADYLLKVVAGDTEDFARIHRKHLATLPGVAQMQSSFALRNVRQTTALPV" gene complement(2009879..2011111) /locus_tag="SKA53_10144" CDS complement(2009879..2011111) /locus_tag="SKA53_10144" /note="COG1035 Coenzyme F420-reducing hydrogenase, beta subunit" /codon_start=1 /transl_table=11 /product="possible coenzyme F420 hydrogenase beta subunit" /db_xref="CDD:10763" /translation="MTINTPDFAQPAPRGLCTDCGVSRMADASACGKACQFIKPDYPA MEARVHGRAAGMQGDEPFFGVTGAMYRAALQPARQGAQWTGLTTRLAERLLETGAVDA VLTMVADPADRWRPRPAIITDAADMAEARGMRMGYAPLLALLEPARAAGHRRIAVIGI PCQIYALRALEAQLGFERIYVIGTPCSDNTTTENFHGFLARLTDAPDTVTYLEFRADY HVELRFADGSERLIPFLKLPIADLPRDFFPTTCRTCVDYTNRLADITVGYMAGEGEQW LIVRNVRGQEMLDGLGAEVTLAAPGSRGKRAGAVKGFVENTRLAAGGLPLRRMPDFMR GIMGWLMPKIGPRGLEFARARLEMKAAETILHLRREEPAKIKNMVPAHVWNLAAPYGL TPEAGEVSARPKDDDHQQ" gene 2011230..2012252 /locus_tag="SKA53_10149" CDS 2011230..2012252 /locus_tag="SKA53_10149" /EC_number="1.2.1.11" /note="COG0136 Aspartate-semialdehyde dehydrogenase" /codon_start=1 /transl_table=11 /product="aspartate-semialdehyde dehydrogenase" /db_xref="CDD:10011" /translation="MGYRIAIVGATGNVGREMLNILHERTFPVDEIVALASRRSLGSE VSFGDTTLKTKDLDTFDFTGWDIALFAVGSEATKTYAPKAAKAGCVVIDNSSLYRYDP DVPLIVPEVNAQAIHGYSKKNIIANPNCSTAQMVVALKPLHDRARIKRVVVSTYQSVS GAGKEGIDELWDQTKSIYNPTDSKPPKKFTKQIAFNVIPHIDVFLDDGSTKEEWKMVA ETKKILDTKIKVTATCVRVPVFVGHSESINIEFEDFLDEHEARDILRESPGIMVIDKR EDGGYVTPIECVGDYATFISRIRQDSTIDNGLNLWCVSDNLRKGAALNAVQIAEVLGR ECLKKG" gene 2012391..2014037 /locus_tag="SKA53_10154" CDS 2012391..2014037 /locus_tag="SKA53_10154" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIRLFVTTSLLALAAPAFADTITGQARVDTVTIFPGLATVTRLV TLDLPAGQHDITVPDLPQGLSADGLRISAPGQVRLGAVSRAFDRLPVTPDQYSPAILA ARTQVERLEDVLRESDAAIATIRLRAQAAEDQIAFLQSLGQASAGETLSTIANIQALA QMVGSETLALRTAAFAAEQEAQAATRARKNDVDALDNARRALAALLAPEEQGSVLSFT LDAAEAGEVTLEINTTESFATWSPVYDLRLTTGDDPRLDIDRAVVISQATGQDWLDVQ LILSTARPGDQIAPGGAWAELRRIIAEDALTREATGMADEPMPLQRNSAVMASPMMDA TPITAQADFSGAAVLYVYPNRIDIRNGVEDLRLPLDQLTFDADVWAEATPMTDANAYR MAEFTNTTDEILLPGRAMLHADGTMIGFSHLPLLAAGADLDVGFGPQDGLRLTRITPD RSEGDRGVFSSSNQLVERTVLTVENLTGQDWEVLLRDAVPYSEQDDLQISLTAAPEAT RRDPDGARGIVEWDLSVPAGAKQEVVMETTLRWPSGFVLH" gene complement(2014059..2016497) /locus_tag="SKA53_10159" CDS complement(2014059..2016497) /locus_tag="SKA53_10159" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase/aminomethyl transferase" /db_xref="CDD:10278" /translation="MLPKHARVVIIGGGVIGCSVAYHLTKLGWQDVVLLERKQLTSGT TWHAAGLIGQLRATANMTRLANYSQQLYGGLEAETGIATGFRRVGSITVALTDERREE LFRSAGMARAFGVEIEEISPTEVKNRYHHLNIDGVTAGVFLPKDGQGDPANIALALAK DARMRGAIVAEHTKVTAINRTGRRVTSVDWASGDDVGQITCDMVVNCAGMWGHQVGRM AGVNVPLHACEHFYIVSEPIPGLTQMPVLRVPDECAYYKEDAGKIMLGAFEPNAKPWG MAGISEDFEFDQLPEDFDHFEPILEQAVNRMPMLASAGIHTFFNGPESFTPDDAYHLG LAPEMDNVWVAAGFNSIGIQSAGGAGMALSQWMDAGEKPFDLGDVDISRMQPFQGNKT YLFERSKETLGLLYADHFPYRQKATARGIRRTPFHRHLLDQGAVMGELAGWERANWFA VPGQDPAYAYSWQRQNFFGNVGAELAAVRGNVGMYDMSSFGKIRVEGRDACAFLNHIC GAQMDVAVGRIVYTQFLNAKAGIEADVTVTRLSETAYLVVTPAATRLADQTWMQRNLG DYTAVITDVTAGEGVLAVMGPHSRALLQKVSPNDFSNDHNPFGTAQEIEIGMALARVH RVSYVGELGWEVYISADMAGHVFEVLHAAGQDMGLKLCGMHMMDAARMEKGFRHFGHD ITCEDHVLEAGLGFAVKTDKPVFIGRDAVLRKRDAGLARRLLQFKLTDPAPLLYHNEP VLRDGRVVGHLTSGGYGHHVGAALGMGYVPCAGESVDDLLASRYEIDVMGVRVVAEAQ LKPFYDPAGARVKM" gene complement(2016519..2017367) /locus_tag="SKA53_10164" CDS complement(2016519..2017367) /locus_tag="SKA53_10164" /note="COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)" /codon_start=1 /transl_table=11 /product="homocysteine S-methyltransferase family protein" /db_xref="CDD:11748" /translation="MTKITLLDGGMGQELIRRSGEAPTPLWSTQVMIDHPGMVAAVHA DYRAAGATVHTTNTYAIHRDRLEGTGLEDRFADLTAAASTEAQGSGRIAGSIGPLIAS YRPDIHPAHDIAVPAYAEVAALIAPRVDLFLCETVASVAHARAVLAATLPLGKPVWLS VTLDDEDGSRLRSGEPVADVLEAAQGASALLANCSAPEAMAAAMAAFAKGNLPFGAYA NGFTQITKDFLKSKPTVDALSARRDLGPDAYAHFALGWIDQGPPSSVAAARSAPPISR GWRSNC" gene complement(2017396..2019840) /locus_tag="SKA53_10169" CDS complement(2017396..2019840) /locus_tag="SKA53_10169" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="aminomethyl transferase family protein" /db_xref="CDD:10278" /translation="MNDFPTSARVVIIGGGVVGVSTLYHLAKKGWTDCVLLEKNELTA GSTWHAAGNCPSFSTSWAVMNMQRYSLSLYKRLAAEVDYPINYHVTGSIRLAHSKERM QEFARARAMGNYQGLNLALMTPEEAQAAYPFLETHDLAGALYDPDDGDIDPAQLTQAL AKGARQMGARIERFCPATGVTQTPGGWIVHTDKGDIACEKVVNAAGYYAQRVGEWFKP YGGRTVPMVTMSHQYFLTDEIPALAEWTAANGRKVPLLRDVDSSYYLRQDKNGLNLGP YERNCRAHWVTPDDPQPDDFSFQLYPDDLDRLEWYIEDAMARVPILGTAGVGRVINGP IPYAPDGLPLLGPMPGVKNAYEACVFTFGITQGGGAGKVAAEWIVDGQPEWDMWSCDP RRYTDYTGQEYCHAKAVETYGHEYAMHFPYHAWPAGRDQRLSPLHDRIKALGGVMGAY NGWERANWFAKSGDDLSEAATQTWGRAGPWQPRIAAECAAVRDHAGVIAISGFTRLAV TGPGARAHVDRLTASTLPKPGRVGLAYFPDDRGRILTEMSVIPQSDDDIWLITASVAQ WHDRDVLLRDLPDGVRVQDRSDQYECLLVTGPKARDILAPLTDADLTLPWLSFQDAQV CGKPCHLLRVSFAGELGWEVHCANADAPAIYDAILGGGAVPFGMFALNALRIEKGYRA WKGDLSTDYSLLEGGLDRFINFDKPDFVGKPALLAEKQRGVAKRFVTLVLDDADAYDA PYMATISHDGAVVGETTSGAFGYRVGKSIALGMLRADLAVAGTKVAIDIYGTQVSATV QPDAPLWDPANARIRA" gene complement(2019837..2020097) /locus_tag="SKA53_10174" CDS complement(2019837..2020097) /locus_tag="SKA53_10174" /note="COG3791 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13111" /translation="MQVPDADLSVTGEVRWYAATPAARRGFCPTCGSFLFWKGHDDPD TGIALGALDGPTGLTLARHIFVADKGDYYEIHGGVPQEEQET" gene complement(2020226..2020795) /locus_tag="SKA53_10179" CDS complement(2020226..2020795) /locus_tag="SKA53_10179" /note="COG1396 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="DNA-binding protein, putative" /db_xref="CDD:16530" /translation="MEDFHASASFDLQGADLRALRKARGLTLTALAERVGRSVGWLSQ VERDLSSASVDDIAALARVLDVATSSLLALGGGQEAGRIVRADNRRPIGNRNPGLTEG LLSPDLTDDFEVIHSRFAPGARLDHAVSRPTQEVGYVVAGHFDLWIEETLFHLHPGDS FRLRGDLFRWANPYPETCEIIWVISPPVY" gene complement(2020928..2021380) /locus_tag="SKA53_10184" CDS complement(2020928..2021380) /locus_tag="SKA53_10184" /note="COG1956 GAF domain-containing protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11664" /translation="MRVDYPTLHQTIASLTEGETDQVALMATVACEVHHSDDRFNWTG FYRVVGPELLKIGPYQGGHGCLVIPFARGVCGAAARTGQVQLVPDVDSFPGHIACASS TRSEIVLPVFAASGALIGVFDIDSDKPDAFTQADADALTDILHSVFAR" gene complement(2021468..2022628) /locus_tag="SKA53_10189" CDS complement(2021468..2022628) /locus_tag="SKA53_10189" /note="COG0183 Acetyl-CoA acetyltransferase" /codon_start=1 /transl_table=11 /product="acetyl-CoA C-acetyltransferase" /db_xref="CDD:27979" /translation="MQDVVITGAARTAMGGFQGVFADVDAPTLGGAAIRAALENAGVA TVDEVLMGCVLPAGQGQAPARQAAFLGGLGEEVPATTLNKMCGSGMKAAMMAFDQITA GSADVMIAGGMESMTNAPYLMPKMRSGARIGHAQVIDSMFLDGLEDAYDKGRLMGTFA EDCATTYQFTRAAQDDYALQSLSNALAAQDSGAFDREITPVTLKTRTGEVRITADEQP AKARPEKIPTLKPAFRDGGTVTAANASSISDGAAALVLARGDTATNIRARIMGHASHA QAPGLFTTAPVPAAQKLLARLGWSVGDVDLWEVNEAFAVVPMAFMREMNILRDRINVN GGACALGHPIGASGARIIVTLLNALETRGLRRGIAAICIGGGEGTAIAIERP" gene 2022753..2024327 /locus_tag="SKA53_10194" CDS 2022753..2024327 /locus_tag="SKA53_10194" /note="COG0405 Gamma-glutamyltransferase" /codon_start=1 /transl_table=11 /product="Probable gamma-glutamyltranspeptidase" /db_xref="CDD:24503" /translation="MRDFHKPGRSAVYATNGMCATSHPLATKVAVQMLEAGGNAVDAA IAGAVLLGICEPQMTGIGGDCFVLFTPPGEDRVLALNGSGRAPAGINADALRAKGPVI APYSADAVSVPGAVDAFCRLSKDWGKLGLKAVLAPAIHYAQTGVPVAERVASDWGKAD SNLSGTARDLFLLDGKPPRPGQVFAAPRQAEALRRIALHGRTGFYEGEVAEDMVAALR AQGGTHTLEDFAATACDYTDPITGGYGGLELCEHPPNGQGATAILLLNILKHFDIAAM DPWGAARAHVEAEATKLAYDTRNRFMADPGYMTRLDHMTAPETAAKLAALIDPKRAMP AGLPGAEAVHKDTIYITVVDKNRMAVSLIYSVFHAFGSGIASDKYGILFHNRGAGFTL EQGHPNEVAGGKRPMHTIIPAILKKDGKVMMPFGVMGGQYQATGHARFVSNITDFGLS PQAAIDAPRSFAEGNVLNVENGYSDAVKTELGARGHNVQTPDTAIGGSQAILIHPDGV LEGGSDPRKDGCALGY" gene complement(2024341..2024724) /locus_tag="SKA53_10199" CDS complement(2024341..2024724) /locus_tag="SKA53_10199" /note="COG0306 Phosphate/sulphate permeases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGAGGSNGGTRQFLIGLIMMIGGGYLLLNGIVVRPSLGGRIFGV GGMPVTSGMILIPLMFGIGLIFYNAKNRLGWIIAGASLIALVFGVIANTTVQFARLSI FDLLVILVLLVGGAGLFLRSLRKSG" gene complement(2024800..2025330) /locus_tag="SKA53_10204" CDS complement(2024800..2025330) /locus_tag="SKA53_10204" /note="COG0431 Predicted flavoprotein" /codon_start=1 /transl_table=11 /product="NADPH-dependent FMN reductase domain protein" /db_xref="CDD:10305" /translation="MTTLLGISGSLRKASTNTMLMRNAAEIFGPDSYFEGDIRFPLYD GDLEEAEGIPAAVQMLADQIAAADAVIIATPEYNKAMSGALKNALDWVSRTKGGVWKN KPLAIMSATGGRAGGERAQFSLRLAMMPFRPHILQGPEVLVANSAKEFDENGKLTGEM YINLLAELMGDLRALT" gene 2025434..2027086 /locus_tag="SKA53_10209" CDS 2025434..2027086 /locus_tag="SKA53_10209" /EC_number="2.2.1.6" /note="COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]" /codon_start=1 /transl_table=11 /product="acetolactate synthase II large subunit" /db_xref="CDD:9904" /translation="MQRHGGKILSDQLKKLGVRRVFSVPGESFLAALDGLYYSGIANI VCRQEGGAAMMAEAYGKMTGQPGVCFVTRGPGATNASAGIHIAMQDSTPMVLFVGQID NRHTDRETFQEVDYKAMFGPIAKWVAQIDHTDRLPEYIGRAFRVAMSGRPGPVVLALP ENMLSDHADVPDIRMSDTYPTEMPADAKHAILHALGQAERPLVVVGGPHWSAQAQTDL QAFAKQHHLPVAVSFRRQDYIDNNHGCYAGDLNVGINPRLAARVREADLLLLIGTRFG DIETQGYTLVDPAAPQKTIIHIHADADEIGRVYAPDIGVVTTAPAALRALAAASPVGD WSSWTAAARADYDAWISPQESPGALKQEQVIKWLSDHLPDDAILTNGAGNYAAWLHRY FVYKKHGTQLAPTSGSMGYGFPAAISASLEYPDRTVVCLAGDGCFQMTCNELSTAAQH GATPIVVVMDNGRYGTIRMHQEKHYPGRVSGTMLANPDFATLARAYGGYGETVTTSAD FVAAFGRAQAAGTFAIIACKVDEEALSTGATLSAVRAAALAR" gene complement(2027214..2028287) /locus_tag="SKA53_10214" CDS complement(2027214..2028287) /locus_tag="SKA53_10214" /note="COG0016 Phenylalanyl-tRNA synthetase alpha subunit" /codon_start=1 /transl_table=11 /product="phenylalanyl-tRNA synthetase, alpha subunit" /db_xref="CDD:9892" /translation="MDDLKAKYLSLIAAAGDEAAIEDLRITALGKKGEISLQMRELGK MSPEERQTAGPALNALKDEINSALAAKKAALGDAALDARLRGEWLDVTLPSRPRRQGT IHPISQVTEEVTAIFADMGFSVAEGPQIESDWYNFDALNIPGHHPARAEMDTFYTHRS AGDNRPPHVLRTHTSPVQIRSMEATGASTRIICPGRVYRADYDQTHTPMFHQVEGLAI DKDISMANLKWVLEEFVKSYFEVDHVDIRFRASHFPFTEPSAEVDIRCSWEGGTLKVG EGDDWLEILGSGMVHPKVLQAAGVDPTQWQGFAFGMGIDRIAMLKYGIPDLRAFFDSD LRWLRHYGFAALDVPTLHGGLSR" gene complement(2028414..2028773) /locus_tag="SKA53_10219" CDS complement(2028414..2028773) /locus_tag="SKA53_10219" /note="COG0292 Ribosomal protein L20" /codon_start=1 /transl_table=11 /product="50S ribosomal protein L20" /db_xref="CDD:1014" /translation="MRVKGGTVTHRRHKKVLDAAKGYYDRRSKTFKVAKQAVDKANQY ATRDRHNRKRNFRALWIQRINAGVRSVDETLNYSKFINGLALAGIEVDRKVLADLAVN EPEAFATIVGQAKAAMA" gene complement(2028791..2028991) /locus_tag="SKA53_10224" CDS complement(2028791..2028991) /locus_tag="SKA53_10224" /note="COG0291 Ribosomal protein L35" /codon_start=1 /transl_table=11 /product="ribosomal protein L35" /db_xref="CDD:10165" /translation="MPKMKTKSSCKKRFKVTATGRILAGQAGKRHGMIKRSNKFLRNA RGTTTLSKQDEGIIKPMMPYAR" gene complement(2029150..2030595) /locus_tag="SKA53_10229" CDS complement(2029150..2030595) /locus_tag="SKA53_10229" /note="COG0469 Pyruvate kinase" /codon_start=1 /transl_table=11 /product="pyruvate kinase" /db_xref="CDD:24183" /translation="MKRHRNVKIVATLGPASNDYAMIRALHEAGADVFRLNMSHGDHE EIRKRHAIIRQVEKDLDSPIAILADLQGPKLRVGVFANGEEELVPGASFRLDLDKTDG DATRVCLPHTEIFDALEPGAHLLVNDGKIKLRVKDCGATFADCEVIVGGTISNRKGVN VPDVVLPLAALSDKDRKDLEFVCELGVDWLALSFVQRPADVDEARVLAKGRAAILSKI EKPAAVKNFDEILAVSDGIMVARGDLGVELPVQNVPPIQKQLVRKCRAAAKPVIVATQ MLESMIESPMPTRAEVSDVATAIYEGADAIMLSAESAAGSYPIEAVQTMDNVAREVEA DPTYTEIIEASRRAVRTSVADGIVSAAREIAETTDIKAICCFSQSGTTALLVARERPR VPIIALTSHIRTARRLCLSWGTNCVITGEVNRFKDAVIAAVRATLAQGMATKDDMVVV TAGVPFNTPGSTNILRVAPCEERLIYASETE" gene 2030700..2031437 /locus_tag="SKA53_10234" CDS 2030700..2031437 /locus_tag="SKA53_10234" /note="COG3931 Predicted N-formylglutamate amidohydrolase" /codon_start=1 /transl_table=11 /product="possible N-formylglutamate amidohydrolase" /db_xref="CDD:13238" /translation="MTHPAYEIEGADRPGRWLVTCDHATNHVPDWVQDGDLGLRAADM GRHIAYDIGAAGVTRHLAALLDSPAILSRFSRLVIDPNRGEDDPTLLMRLYDGTIIPA NRHAGPQDLTERLDRLYRPYHDAYADLASQMQRPVICAIHSFTPRLRSRAPRPWEVGV LFAHDDRLAKPFIAACRAQGWCTGENEPYAGHLPGDAIDRHALQHGRPNVLIELRQDL IADEAGQMAWADRLAPILQNILQDSQL" gene 2031434..2031742 /locus_tag="SKA53_10239" CDS 2031434..2031742 /locus_tag="SKA53_10239" /note="COG3492 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26952" /translation="MKETDMDDQTRIELEAAAFRRLRQHLQTDRPDVQNIDMMNLTGF CRNCLSRWYQEAAIERGIPMTKDEGREAFYGMPYDDWRAQHQTEASPAAQEAFKSSHD " gene 2031735..2032874 /locus_tag="SKA53_10244" CDS 2031735..2032874 /locus_tag="SKA53_10244" /EC_number="3.5.1.18" /note="COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /codon_start=1 /transl_table=11 /product="succinyl-diaminopimelate desuccinylase" /db_xref="CDD:10494" /translation="MIDPVALTADLVRCPSVTPVEGGALVLLEDLLTKGGFTCTRVDR GGVSNLFARWGRQGANRTFGFNGHTDVVPLGDEAAWTMPPFGAVIKDGYLYGRGSTDM KSGVAAFAAAALDFVTDTPPDGAVILAITGDEEGDALDGTTALLDWMATNGEAMSVCL VGEPTCPDVMGEAMKIGRRGSLNATFTVTGVQGHSAYPHRAKNPLPAVARLVDILASH ALDQGTAHFDPSTLAVVTIDTGNPATNVIPAQTKAGVNIRFNDLHSGASLTEWMQGIA DQVAADFGVRIAMQVKVSGESFITPPGPLSDLVGKAVKAETGRDPVLSTSGGTSDARF VQHHCPVVEFGLVGKTMHQVDERVAVDQIVQLKAIYGRILADYFA" gene 2032943..2035198 /locus_tag="SKA53_10249" CDS 2032943..2035198 /locus_tag="SKA53_10249" /note="COG0557 Exoribonuclease R" /codon_start=1 /transl_table=11 /product="ribonuclease R" /db_xref="CDD:10428" /translation="MTQIPSKSEILAFIADNPTQTAKRDIARAFGIKGAARIDLKRIL KELEEAGKLTKRRSSYRDAEDLPPVAVLEILAPDADGDLFARPLEWTGQGPEPRVLML LRSSDPALGAGDRILGRLTLDKTEDHTHTARMIRRIGTNPMRILGVFRAGSEGGRVLP IDKGADKQWVVPAGATGGAKDGELVEAEQAGPKGRLGLPKARIVARLGDPTAPRAVSL IAIHQHGIPDHFPDDAVAEADAAKPVGVKGRKDLRDLPLITIDPWDARDHDDACFVEA DEDPANAGGFIIWVAIADVAAYVKPNTALDNEARKRGNSTYFPDRVVPMLPDRLSGDL CSLHEGVDRACIAVAMRIDAQGQKIGHEFHRGLMKSVASLNYEEVQDAIDGQPNDKTA PLMQDIIRPIYAAYAALVKARALRQPLELDLPERQIILNDDGKVTSVQFKERLDAHRL IEEFMVLANVAAAETLIAKKSPLLFRVHEEPNPDKLDALRDVAQASGLVLAKGQVLKT AHLNRLLIAARETEQSDLINMATLRSMTQAYYSPDNLGHFGLALRSYAHFTSPIRRYS DLIVHRALIAAHGWGKDGLSPWDVENLGDTAQKISDTERRSMSAERDTTDRYLAAFLS DRIGVEMGGRISGIAKFGVFVKLDETGADGMIPIRTLGREYFHYDADSQTLMGSDSGT LIRLGQRVTVKLIEAAPVTGGLIVELLTLDERTMPRGPSVTRGKPVRRKQAGAKAKAA KIARKVKRTRM" gene complement(2035280..2035783) /locus_tag="SKA53_10254" CDS complement(2035280..2035783) /locus_tag="SKA53_10254" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family, NudH subfamily" /db_xref="CDD:25476" /translation="MKHQGPFMTIDEIANLPYRPCVGVMLINPRGHVFVGQRLDRDTD AWQMPQGGVDPGENTRTAALRELEEETGITPNLVSIEAETAGLIPYDLPVALVPHIWK GRYRGQEQKWFLMRFHGQDSQINLQTAHPEFSAWKWVPPADLVAGIVPFKRAVYEQVL AEFAAKL" gene complement(2035831..2036325) /locus_tag="SKA53_10259" CDS complement(2035831..2036325) /locus_tag="SKA53_10259" /note="COG3786 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13106" /translation="MKPTDLVLTPTHLRFLNRRFPRTIGHGGVVKRKKEGDGATPIGT HRLVGMLYRSDRMTRPADWALPIKPFDLWSDDIRDPDYNMMVRAPHPYRHERLRRADP MYDLVILTDWNWPYAVKGRGSAIFIHQWRGPGRPTAGCIGLRRDHLRWIAARIRHETR LVIA" gene complement(2036421..2037500) /locus_tag="SKA53_10264" CDS complement(2036421..2037500) /locus_tag="SKA53_10264" /note="COG0807 GTP cyclohydrolase II" /codon_start=1 /transl_table=11 /product="3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" /db_xref="CDD:10675" /translation="MTGFSPDITERLARARADLRMGVPVVLDGGAVMLAAETLDADRL AHLRTLGGAPVLAITSWRAQTLKARAYDGDLARIALPLDVGLSWVRSVADPADDLRAP MKGPLRSIRDGNADLHRAAIALTKAARLLPAALVLAIDDAHGFAKAYDLTLIPGAAAL DLTLSPLRPVISARLPLEVSEAGRLHIFRPDDGAEEHYAVEIGQPDRSQPVLSRLHSA CFTGDLLGSLKCDCGPQLRGALAQMGATGAGVLLYLNQEGRGIGLANKMRAYSLQDQG FDTVEANHRLGFEDDERDFRIGAEILKKMGFSAVRLLTNNPAKVARMESCGIAVVERV PLKVGENSHNHGYLATKAAKSGHLL" gene 2037638..2038339 /locus_tag="SKA53_10269" CDS 2037638..2038339 /locus_tag="SKA53_10269" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator" /db_xref="CDD:10613" /translation="MMETVMGQLKKILLVDDDDDLREALGEQLLMTEDFDVFEADDGA SAIVKTKEGLYDLMILDVGLPDTDGRELCRRLRKQGVKCPIIMLTAQDSDADTILGLD AGANDYVSKPFKFPVLLARIRSQLRTHEQSEDAIFQLGPYTFKPAQKMLITEDDKKVR LTEKETNILKYLYRATDGVVARDVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSN ARLLVTEQGGYRLVS" gene 2038444..2038818 /locus_tag="SKA53_10274" CDS 2038444..2038818 /locus_tag="SKA53_10274" /note="COG0607 Rhodanese-related sulfurtransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27914" /translation="MKTAQDYLDEANAVVTRITSKDAIAKHAEGAGVFIDVRDSSDIA NSGTIKGAERVARGFIEFAADPTSKFHKPFFDKDRTYYLVCGLGGQAALAGKTLKDMG YPNVINVGGIGDWKDAGGPVED" gene complement(2038815..2039936) /locus_tag="SKA53_10279" CDS complement(2038815..2039936) /locus_tag="SKA53_10279" /note="COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases" /codon_start=1 /transl_table=11 /product="Cystathionine gamma-synthase" /db_xref="CDD:10496" /translation="MKKPLHPATIAAHAAGALDPQSGGVVPALQPSTTFLRDESYALV RPDNIYSRDNSDNMRQAEAVIRALENAQDTLLFPSGMAAIAAVFRALPNRASAIVQSG IYWGTTAWVRDFCARREITLIEAPAADLIPTCQAHPADLVLIETPSNPWLLTVDIAAV KQATKGILLVDGTAATPVLTRALDHGADIVMHSATKAINGHSDVLAGVLSTAAPERDV WQAIKADRKMAGAILGPFEAWLLTRAMRTLPLRVERMSQNALALAQHLMAHDAVEDVF YPGLPHHQGHDIALRQMQGGFGSLLSVLVKGGRADALRVTGKLELFLRATSLGGVESL VEHRHTIEPHTGIPENLIRVSTGIEHIDDLIADWDQALA" gene complement(2039978..2040868) /locus_tag="SKA53_10284" CDS complement(2039978..2040868) /locus_tag="SKA53_10284" /note="COG0560 Phosphoserine phosphatase" /codon_start=1 /transl_table=11 /product="phosphoserine phosphatase" /db_xref="CDD:10431" /translation="MKEKIMFTATLLTNPVSRGLDPALVENLRNAWGGADAVWLAPDE AAEFAIPVMPSNCWDIWADLQDHGVDMVIQPAANRRKKMLLADMDSTMIQQECIDELA DEAGVGAHVAGITARAMNGELDFEAALIERVGLLRDLPEAVIAQVLASRITYMPGGAV LVATMKAQGAYAALVSGGFTAFTAQVAARLGFDENRANTLLVADGRLTGDVARPILGK AAKVAALEDITARLGITAADVLAVGDGANDLGMLSRAGAGVALHAKPAVQAQCDIRIN HGDLTALLYLQGYGRDDFVG" gene 2041026..2042168 /locus_tag="SKA53_10289" CDS 2041026..2042168 /locus_tag="SKA53_10289" /EC_number="2.6.1.52" /note="COG1932 Phosphoserine aminotransferase" /codon_start=1 /transl_table=11 /product="phosphoserine aminotransferase" /db_xref="CDD:11640" /translation="MVTTKPAARPANPRFSSGPCAKPPVWKLDDLRDAPLGRSHRAAI GKSKLAEAIDLTREILGVPADYRIGIVPASDTGAYEMAMWTMLGARPVEMVAWESFGA GWVTDVVKQLKIDATVHEAPYGEIVDMAALNYDHDVCFTWNGTTSGVRMPHGDMIPAD RAGLTLCDATSAAFAQDLPWDKLDVTTFSWQKVMGGEGAHGMLILSPRAVERLESYTP AWPLPKIFRLTSKGKLIEGIFKGETINTPSMLSVEDYLVALKWGRSIGGLDALIHRAN ANARAIWNFCADHSWIDNLAVDPVTRSNTSVCLKFTDPRITDGEAFAKAVAKRLEAEN IALDIGAYRDAPAGLRIWCGATVETSDIEAMLPWLDWAYQTEISHQ" gene 2042257..2043849 /locus_tag="SKA53_10294" CDS 2042257..2043849 /locus_tag="SKA53_10294" /note="COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases" /codon_start=1 /transl_table=11 /product="D-3-phosphoglycerate dehydrogenase" /db_xref="CDD:9986" /translation="MAPKVLISDELSEAAVQIFKDRGIDVDFQPNLGKDKEKLLEIIG NYDGLAIRSATKATEKIIAAATNLKVIGRAGIGVDNVDIPAASKKGIIVMNTPFGNSI TTAEHAISLMMAVARQIPEANASTHAGKWEKSRFMGVELTAKTLGVIGAGNIGSIVID RALGLRMKVVAYDPFLSEDRATEIGVEKVELDDLLARADFITMHVPLTDQTRNILSRE NIAKLKQGVRIINCARGGLVDEDALADALKSGHVAGAAFDVFAVEPATDSPLFNLPNV VVTPHLGAATTEAQENVALQVAEQMSDYLLTGAVSNALNMPSVTAEEAKIMGPWIKLS GHLGNFIGQMTDEPIMAINILFDGTASEMNLKALTASSVAGIMKATNPDVNMVSAPVI AKERGVKISTTKQDQSGAFEGYIKVTVVTESRERSIAGTVFNDGKPRFIQIKGINIDA EVGENMVYTTNNDVPGIIGVLGSILGTNSVNIANFTLGRAEAKGEAIALLYLDEPLPA KAVAELEGTGKFKQVKPLRFDI" gene complement(2043931..2045076) /locus_tag="SKA53_10299" CDS complement(2043931..2045076) /locus_tag="SKA53_10299" /note="COG1454 Alcohol dehydrogenase, class IV" /codon_start=1 /transl_table=11 /product="Iron-containing alcohol dehydrogenase" /db_xref="CDD:11168" /translation="MTLTANWSYPTTIKFGVGRISELPALCKGAGITRPLLVTDKALA SLPITAQALDLLDAAGLGRAVFSQVDANPTEANMQAGLIVYRAGGHDGVVAFGGGSAL DLGKMIALMVDQPVSVWDLEDIGDWWTRANPDTIAPIIAVPTTAGTGSEVGRAGVLTD SATHRKKIIFHPKLMPVVTLCDPALTVGMPAFITAGTGMDALAHCLEAYCSPHYHPMS QGIALEGMRLVLENLPRAYAVPDDLDARANMMSAAAMGAVAFQKGLGAIHSLSHPIGA VYNTHHGTTNAVVMPMVLDFNRAEIEVRIDRAAAYLGIAGGFDGFYAHVMDLRASLSI PANLTALGVEAARLDELTEMALLDPSCGGNPVAMTRENTRALFGACM" gene complement(2045080..2046459) /locus_tag="SKA53_10304" CDS complement(2045080..2046459) /locus_tag="SKA53_10304" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="putative Aldehyde dehydrogenase" /db_xref="CDD:10741" /translation="MTTISLISPVDGSVYAERTALPLADAQAAVARARKAQGAWAGLP LDTRIATVMAGITALEGMAAEIVPELAWQMGRPVRYGGEFGGVRERAAYMAGIASDVL ADELVEDSDKFTRLIARQAQGVVFVIAPWNYPFLTAVNTIVPALIAGNAVVLKHASQT LLAGERLAQAFHAAGVPQDVFQNLVLDHATTEALIAERSFDFINFTGSVGGGRAIEKA AAGTFSGTGLELGGKDPGYVRADADLDAAVDGLMDGAMFNSGQCCCGIERIYVHESLY DAFVEKAVAWVRAQRLGNPLDQDTTMGPMAHKRFAAIVRDQVAEAVAQGAHALIDPAE FPADDGGAYLAPQILTHVTHDMRVMREESFGPVVGIMPVKDDAEAIRLMNDCAYGLTA SIWTNDAAAARRIGDQIQTGTVLMNRCDYLDPALCWTGCKDTGRGAALSALGYLALTR AKSYHLKKA" gene complement(2046487..2047854) /locus_tag="SKA53_10309" CDS complement(2046487..2047854) /locus_tag="SKA53_10309" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="Glutamine synthetase class-I" /db_xref="CDD:22916" /translation="MAGLMTLADLRAAFDAGEIDTVMVAAPDMQGRMVGKRFHAAHFL DSGYQETHCCNYLFATDMEMVTVAGYASTSWAKGYGDYVMKPDLSTLRRVPWLPGTAL VLCDMLDHHTHQEIAISPRAILKRQVARAQALGYQPMAATELEFYIFEQSYDALRDGG TDHLTPVSAYNEDYHLFQTTKEEPLMRALRNGLYGAGIPVENSKGEAEAGQEEINIRY DAMVTTADFHVITKQATKEIAHALGKSVTFMAKYDHRRAGSSSHVHQSLWTLDGAPAF LDKDAEYGMSALMRQYMAGQLAHAREITALLAPYVNSYKRFCVGMFAPTKAVWSLDNR TAGFRVCGDGTKAVRVECRIGGADLNPYLACAALLAAGLAGIEGKMDLEPEMQGDSYR KADAREIPKTLRESADLLQGSAMLRAAFGDDVVDHYTRAARWEIEEHDRVVTDFERQR LLERG" gene complement(2047917..2048954) /locus_tag="SKA53_10314" CDS complement(2047917..2048954) /locus_tag="SKA53_10314" /note="COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="bacterial extracellular solute-binding protein, family 7" /db_xref="CDD:8627" /translation="MTTTRRKFLTTGALGGAAALAAPAVHAQSTIRWRLQTYAGASLG AQVAKPAIDMFNAIAGDEMQIDLFYADQLVPTGELFQAMQRGTIDAVQSDDDSMASPT EVTVFGGYFPFASRYSLDVPALFNNWGLNEIWGEEYAKVGVKHISAGSWDPCHFITST PITSLADLQGKRVFTFPTAGRFLSQFGVVPVTVPWEDVEIALQTREIDGVAWCGITEA HEVGWADVTSHFLTNNISGAWIGHFFSNMERWNELPPHLQVLMTTCFEQSHYYRQHWY WAGEARLRTESKKLELTSIPDAEWATVETAARAFWEEIAAESETKAKVVDIFRNYNAA MDQAGRPYRYS" gene complement(2049013..2050338) /locus_tag="SKA53_10319" CDS complement(2049013..2050338) /locus_tag="SKA53_10319" /note="COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component" /codon_start=1 /transl_table=11 /product="Putative TRAP-T family transporter, DctM (12TMs) subunit" /db_xref="CDD:13807" /translation="MPYEMIAALMFGSMLAVMLTGQRMFGVIGFVAVVAAVWLWGDRG GHDLAFAQTIKLMNWFPLMTLPMFIFMGYVLSESKLADDLYRMFHVWFGPVPGGLAIG TILLMVLISAMNGLSVAGMAIGATIALPELLKRNYDKLMVTGVIQAGSSLGILVPPSV VLVLYAMIARQPVTHLWAAGLVPGLMLAVLFILYIWLRCRMNPALGPAIDPEELAQVT TREKYMLLLSGLMPLAIFAVMMVPFVLGYTRLVESAVVGAISALAVSVAKGRMTWAIL ETCTKKTLAISCMFLWIILAALAFGAVFDGLRAVDFVRQLFMDNLGLGRWEILILMQV SFLLMGMFLDDTAMLVIVAPLYVPIVQMLEFNLIWYGVLYTITCQIAYMTPPFGYNLF LMRAMAPNEVTLTEIYRSIIPFVGVMIIGLGLVMAFPQIALWLPSVLFP" gene complement(2050328..2050858) /locus_tag="SKA53_10324" CDS complement(2050328..2050858) /locus_tag="SKA53_10324" /note="COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /codon_start=1 /transl_table=11 /product="TRAP-T family transporter, DctQ (4TMs) subunit" /db_xref="CDD:13808" /translation="MPRFVMTYLHMVEALNYRVGRLAMWSLFALMGVLAWGAIARAGF SPQIWTDEMAQFLLMGYFMLGGAYSLQMGSAVRMDLLYDRWSDKTKAAVDCITIFTLI VYLGVLLWGGIESTQFALEYGERRRGLWQPYMAPIKIIMCIGILLMILQCSAFLIRDI ATVRGIKIAERDTNAL" gene complement(2050843..2051655) /locus_tag="SKA53_10329" CDS complement(2050843..2051655) /locus_tag="SKA53_10329" /note="COG3931 Predicted N-formylglutamate amidohydrolase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13238" /translation="MQTMTGSGPDWAGSVISWDQSGDQAETVPCVILICEHASNDVVM PWVDAAPDLLASHAASDLGALGLARALGPLLARDHGGAELVHAPLSRLIFDLNRSPDR PDACPAQSELYPVVMNQSITVGERLARMESVYLPFHNLVRARIARALALGRRPVVVTI HSFSPTWHGVPRDVECGVIHDDLPALARRIVAEADDLGLLTALNAPYSAADHVTHTLR LHALPYGLENVMLELRNDLIATPKAQMEIATRLVRVLTRAITQVTSMPCPVL" gene 2051783..2052652 /locus_tag="SKA53_10334" CDS 2051783..2052652 /locus_tag="SKA53_10334" /note="COG1737 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, RpiR family" /db_xref="CDD:11448" /translation="MTQFQTLEDQLRAAMPTMTRAERQLASHMLGNFPLSVLGTVATI AQDAGVSAPTVVRFVRKIGFSGYPEFRAQLHEEMGERLASPITKHEKWADRLEIDHPL NRFALRVIENLRQTLSQQDLRTFDAVRDLLADKSRSVYLIGGRLTRSIAEYFTTALHV MRSDVTLLSSQPNTWPPALLDMSAGDVLVVFDIRRYEPSVQQFAELAHAQQMEVVLFT DQWVSPTAGVARHILTSQIEVPSAWDTIVPLIALVESMLSALQDANWQDTRERLERME RFYEEMLLFKRMR" gene complement(2052822..2053997) /locus_tag="SKA53_10339" CDS complement(2052822..2053997) /locus_tag="SKA53_10339" /note="COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily" /codon_start=1 /transl_table=11 /product="mandelate racemase/muconate lactonizing enzyme family protein" /db_xref="CDD:14081" /translation="MSTPYSMSGAVPVSSDRGKHDSGPRIRRIETFCTPLIGFVRVTA EDNSTGWGQVSTYSSDLTCEILHRQVAPWALGRGMGALEDVIAEIPLREHKFPGTYLR RAMAGLDTAVWDWRGKAVGKPVAELLGGSVGPVRAYASSMRRDITPPDEAVRLQKLRD ECGFDAFKVRVGAECGQDTDAWDGRTEAIIPAIRKAMGPDAALLVDGNSGFGIVRAIE VGRMLEANGYEHFEEPCPYWELEQTAEVTRALSIDVAGGEQDWDIQQWKRIVAMRAVD IIQPDILYLGGMIRSMEVARMGHAAGLPCTPHAANLSLVTLFTMHLLRAVPNPGRYLE FSIEGDDYYPWQRDLFLNDPYKVTSGQVVVSDAPGWGAEINPEWLAKSAYKCSEDAC" gene complement(2053994..2055604) /locus_tag="SKA53_10344" CDS complement(2053994..2055604) /locus_tag="SKA53_10344" /note="COG2303 Choline dehydrogenase and related flavoproteins" /codon_start=1 /transl_table=11 /product="oxidoreductase, GMC family" /db_xref="CDD:11983" /translation="MEDFDYIIVGAGSAGCVLAERLSVSGRHKVLLLEAGGRGWSPWI ALPLGYGKTFYDSRVNWKYQTEPEDALAGRSGYWPRGKVVGGSGAINALVYARGLPQD FEDWAAAGATGWGWDTVQQTYEAMETRRGTRGDRQGRGPLHVQDVSDQIHPVNRHFFA AAEELGLPRTDNINGSACEGAGAYLINTSKGRRMHSARAFLKPALKRPNVTLMTGVIA ERIVFEGLRAAAVQVNKGGRRLTFRAGREIILSAGAVTSPRLLQLSGIGPAELLKSHG IMPLCDAPHVGGNLQDHLGINYYFRATEPTLNNILRPLTGKLRAALQYALTRRGPLAL SVNQCGGYFRSSPDLVGPDQQLYFNPVTYTTTPHGKRSVIQPDPFAGFIIGFQPSRPT SRGRIDISSADPMAAPRIQPNSLATKEDRALVVAGGRLCQRLIETSALQGLVETAMGP DLRVMDDDQILADFRERSGTVFHPVGTCRMGQDAQSSVVNPQLQVHGVQGLRVIDASV FPNLTSGNTNAPTMMLAHRAAALILEDA" gene complement(2056344..2056514) /locus_tag="SKA53_10349" CDS complement(2056344..2056514) /locus_tag="SKA53_10349" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQRTLSFEITTEHVVFNTLASADLVIWISICLKALVYATTDGSG KRFDPAYATQPA" gene complement(2056634..2056707) /locus_tag="SKA53_t11093" tRNA complement(2056634..2056707) /locus_tag="SKA53_t11093" /product="tRNA-Met" gene complement(2060217..2060290) /locus_tag="SKA53_t11091" tRNA complement(2060217..2060290) /locus_tag="SKA53_t11091" /product="tRNA-Ile" gene complement(2060378..2060450) /locus_tag="SKA53_t11089" tRNA complement(2060378..2060450) /locus_tag="SKA53_t11089" /product="tRNA-Ala" gene complement(2062784..2063401) /locus_tag="SKA53_10354" CDS complement(2062784..2063401) /locus_tag="SKA53_10354" /note="COG2717 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:17629" /translation="MTLSATVNGALRNVRAWPLYGIAATYAAWEFWRAVNQQGPYLVE PINVLERTYGEIALILLVAGLLVTPLRQWTGVNLIKFRRAIGLCAFFFVLAHFLVFAV LDVQSLGRVWTETVKRPYVTVGMLAFVLLIPLAVTSNNLSIRKMGAAAWRQLHKLSYV AVILGALHYLWLSRGFQVEPLVYLVLSIGLVALRYRHVAWRKQAA" gene complement(2063438..2064340) /locus_tag="SKA53_10359" CDS complement(2063438..2064340) /locus_tag="SKA53_10359" /note="COG2041 Sulfite oxidase and related enzymes" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:28610" /translation="MAYRWKNTLTHADITPKAAYLNRRQILAGAAGLGAIGLVPRAAD AQAGLEPNTLEEIRSYNNFYEFGTGKGDPAANAHQLVTAPWSIKVDGMVDRPGDYALG DLLAGLTVEDRIYRFRCVEAWSMVIPWNGIELADILNKVGVQSGARYVAFETVVQPEN MIGVQRRVLDFPYVEGLRLDEAMHPLTIMATGIYGEPIANQNGAPIRLVVPWKYGFKS IKSIVRITLTDQEPPISWNIANAREYGFYSNVNPNVDHPRWSQASERRIGGGLFAARQ DTLMFNGYPEVAPLYDGMDLSVFI" gene 2064658..2065092 /locus_tag="SKA53_10364" CDS 2064658..2065092 /locus_tag="SKA53_10364" /note="COG2335 Secreted and surface protein containing fasciclin-like repeats" /codon_start=1 /transl_table=11 /product="Beta-Ig-H3/Fasciclin" /db_xref="CDD:25913" /translation="MSSVAFAAGHSKDIVDTAVEAGTFTTLVAAVEAAGLVETLKSEG PFTVFAPTDEAFAALPAGTVEGLLADPEALAAILTYHVVAGKVMSTDLSDGMTATTVN GADITIGTTNGVTVNGANVVTADIEASNGVIHVIDAVILPPM" gene complement(2065235..2067883) /locus_tag="SKA53_10369" CDS complement(2065235..2067883) /locus_tag="SKA53_10369" /note="COG0542 ATPases with chaperone activity, ATP-binding subunit" /codon_start=1 /transl_table=11 /product="Chaperone ClpB" /db_xref="CDD:10413" /translation="MFVNGRFIKENTMNLDKFTERSRGFIQSAQTIAMRENHQRLTPE HLLKALLDDEEGLAANLITRAGGRPADVLGAVNATLAKLPKVTGDAAQVYLDNITATV VDEAEKIAKKAGDSFVPVERLLTALALVKSKAKDALDAGGVTAQALNAAINDMRKGRT ADSASAEDSFDALKKYARDLTEAAEQGKIDPIIGRDEEIRRAMQVLSRRTKNNPVLIG EPGVGKTAIAEGLALRIVNGDVPESLRHKKLMALDMGALIAGAKYRGEFEERLKAVLK EIETAAGEIILFIDEMHTLVGAGKADGAMDAANLIKPALARGELHCIGATTLAEYRKY VEKDAALARRFQPLLVEEPTVVDTISILRGIKEKYELHHGVRISDSALVAAATLSHRY ITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALDRQILQLQIEAEALKKEDDKASK DRLEKLEKELADVQDRASEMTAKWQTERDKLEDTRGVKERLDRARADLDIAKREGNLA KAGELSYGVIPQLERQLAEVEANDDLMVEEAVRPEQIAEVVERWTGIPMSKMLEGERD KLLRMEDALGKRVIGQKTAVRAVANAVRRARAGLNDENRPLGSFLFLGPTGVGKTELT KAVAEYLFDDDSAMVRIDMSEFMEKHAVSRLIGAPPGYVGYDEGGVLTEAVRRRPYQV ILFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRHVDFKQTLIILTSNLGAQALSQLPDG VDSGAAKRDVMDAVRAHFRPEFLNRLDETIIFDRLARDDMAGIVAIQLGLLAKRLAGR NISLDLDDGALRWLADEGYDPVFGARPLKRVIQRTLQDQLAEMILGGDVLEGAVIKVT AGVDGLIVGDRVATSSQIAPPNLPLH" gene 2068000..2068710 /locus_tag="SKA53_10374" CDS 2068000..2068710 /locus_tag="SKA53_10374" /EC_number="4.1.1.23" /note="COG0284 Orotidine-5'-phosphate decarboxylase" /codon_start=1 /transl_table=11 /product="orotidine 5'-phosphate decarboxylase" /db_xref="CDD:10158" /translation="MPDDRLIVAMDVPNVVAGLELAALLGDSVSFYKIGLGMLTGGGL ALANELKQDQGKRIFLDMKLFDISATIEAAVRGIAAFDLDFLTVHGDPHVVRAARQGA AGSDMKILAVTILTSLDRNDLDASCIKAGNITDLVQERAGLALMAGADGVIASPQEAG LIRALPEAAGKLIVTPGVRPVGADRGDQKRVATPAQAVANGADHVVVGRPIWQAADPR AAAQDILRELSSVQATAP" gene complement(2068707..2068979) /locus_tag="SKA53_10379" CDS complement(2068707..2068979) /locus_tag="SKA53_10379" /note="COG1585 Membrane protein implicated in regulation of membrane protease activity" /codon_start=1 /transl_table=11 /product="conserved hypoothetical protein" /translation="MVLWAQWWVWMSGALILATLEVLIPGYIFLGFAIGAGLLGLLIL FGINATGLALTLVIFAVLSLLSYLGMRRFFRLRQGQVKVWETDIND" gene complement(2068981..2069871) /locus_tag="SKA53_10384" CDS complement(2068981..2069871) /locus_tag="SKA53_10384" /note="COG0330 Membrane protease subunits, stomatin/prohibitin homologs" /codon_start=1 /transl_table=11 /product="Band 7 protein" /db_xref="CDD:10204" /translation="MPMDQFLAEFFGQNILYLLLAVFIVVCVMAGVRIVPQSEKFVVE RLGRLQSVLGPGINFIVPFLDRVRHQVSILERQLPPMTQDAITSDNVLVQVETSVFYR IIEPEKTVYRIRDVDAAISTTVAGIVRSEIGRMELDQVQANRSRLIEAVREQVSQQVD DWGIEVTRAEILDVNLDQATRAAMLQQLNAERARRAQVTEAEGKKRSVELQADADLYA AEQEAKARRVLADAEAYATQVVAGAIAENGLEAAQYQVALKQVEAISKMGAGQGNQTV VLPANALDAFADAFKMLKGR" gene complement(2069900..2071171) /locus_tag="SKA53_10389" CDS complement(2069900..2071171) /locus_tag="SKA53_10389" /EC_number="1.4.99.1" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="D-amino acid dehydrogenase small subunit" /db_xref="CDD:10534" /translation="MAEKAMPSIAVIGAGITGVTTAYSLMIRGFDVTVYDRQRYAGME TSFANGGQLSASNAEVWNQWSTVLKGIKWMLQGDAPLFVNPRPGWHKVSWMMEFLGNI PNYKSNTVKTARLAVAARAGLAEMADRSGVDFDFSPAGILHFYKTDKDLRHARMVNGL LREGGLDRRELTVDEVLAREPTLRGDIIGGFWTESDSTGDIHKFTVGLADWLQKQGVT FRLGVPVTDLHLRDDGVYVESGDETRFDGIVISAGVASRKFAAKLGDRVNIYPVKGYS ITVNLNDAASQAAAPTTSLLDDKAKIVTSRLGRDRLRIAGTAEFNGENRDILERRVRP LIQWCETHFPDVSTEACVPWAGLRPMMPNMMPRVGQGRNDRVFYNTGHGHLGWTLSPA TADAIGATIAARFKSNSMARYDLKSASIVPN" gene 2071488..2072741 /locus_tag="SKA53_10394" CDS 2071488..2072741 /locus_tag="SKA53_10394" /EC_number="2.7.7.7" /note="COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair" /codon_start=1 /transl_table=11 /product="DNA polymerase IV" /db_xref="CDD:10263" /translation="MPALCRDCLTTFDSETRCPACRSPRVTRHPELFALGIAHMDCDA FYASVEKRDNPGLADKPVIIGGGRRGVVSTACYLARIKGVKSAMPMFQALKLCPEAVV IKPRFDAYVKASRAIRAMMDDLTPLVEPLSLDEAFMDLRGTAKLHHAPPAVMLARLIK RMKDELGLTGSIGLSHNKFLAKVASDLEKPRGFSIIGKDETPAFLRPRSVRLIWGIGP AAQASLESAGIRTFDDLLRWDRRDLHARFGHTGERLYALARGEDGRRISPNAPVKTLS NETTFHENTGNPDILDGHLWRMAEKVSARAKATDKAGRVVQLKLKTADFRLISKRQSL HHPTQLADTIYRTARGLFDQVPGSGPYRLLGVGLSDITAAADADRSGDLLDPTADQRA KAEHATDVIRQRFGSDAIIKGRALR" gene complement(2072757..2073620) /locus_tag="SKA53_10399" CDS complement(2072757..2073620) /locus_tag="SKA53_10399" /note="COG3741 N-formylglutamate amidohydrolase" /codon_start=1 /transl_table=11 /product="N-formylglutamate amidohydrolase family protein" /db_xref="CDD:13061" /translation="MPTSPYHLLLPEARSTSVVFASPHSGRDYPASFLRRAVLDAQEI RSSEDAFVDLLFASAPLHGAPFLTATAPRAFLDLNRGPDEFDPALIEGVRRNIHNPRV ASGLGVIPRVVANGRQIYRGKLTLVEAHQRIIQYWRPYHDRLQMLIDQSINDFGQAVL IDCHSMPHEALENMGPPGAGRPDVVLGDRFGATASGAVMDQVEAAFIAAGLKVARNMP FAGAYITQHYGRPSRNQHAIQVEIDRALYMHETTLTPSAGFDAFRDLLDGVIAALANI GRVPAVRVAAE" gene 2073774..2073845 /locus_tag="SKA53_t11085" tRNA 2073774..2073845 /locus_tag="SKA53_t11085" /product="tRNA-Val" gene 2073981..2074049 /locus_tag="SKA53_10404" CDS 2073981..2074049 /locus_tag="SKA53_10404" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRRKGRVYVINKTQRRFKARQG" gene 2074264..2075418 /locus_tag="SKA53_10409" CDS 2074264..2075418 /locus_tag="SKA53_10409" /note="COG2183 Transcriptional accessory protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLSLAAPAFAQDLCGGVGSGGQWIGGDAASSDMTTADNFREQLA LVMGGNDYVALFTLSETTDVRLEAAGRGAGDPIIDLLHADGSLILSDDDSGGNAASRA ETTLDAGSYCMAMRSYDGGPMTAFVRIGRQDHEPLTEGIALQVDPGSSGSCAEAVPIG PLGSSVNGSAIDDPYWSFTLDQPTAISITAVNESADPLITLYDGANNYIAENDDHDGF NSRIDMTDPLAAGTYCISLNALADETAPITLTVSAYDPQAAVLAIYDRGEAAPPLDGT VPVTDLGLVSTRIRQDVNGSSIASWFTVDVDAPGLLMLEAIGNASADPVLVIFDDLGR EIGRNDDHGNTTDSLIAARVTPGTYTIGVWKYGGSLGLIRLLVERYVPAQ" gene complement(2075457..2076653) /locus_tag="SKA53_10414" CDS complement(2075457..2076653) /locus_tag="SKA53_10414" /note="COG1541 Coenzyme F390 synthetase" /codon_start=1 /transl_table=11 /product="phenylacetate-CoA ligase, putative" /db_xref="CDD:11255" /translation="MTTYFDDLETRTPQARAAAQLDQLRAQIARVRAMPGACLPDVVV TSMADLAKFPVLRKSDLGSWQKAQPPFGGLHVSNMTHVFQSPGPIYEPGGSSHDWWRF GRFLHACGIGATDIVQNCFGYHLTPAGTMFENGARAVGAAILPAGTGQTELQVRAAAD IGTTAYAGTPDYLKVILEKADEMGVALKITKAAVSGGALFPQLRQYYADRGVTCLQCY ATADLGHIAYETAPVEGMIVDEGVIVEIVTPGTGDPVVPGDVGEVVVTSLNPDYPLIR FATGDMSAAMPGTSACGRTNMRIKGWMGRADQTTKIKGMFVRPEQVAALVAKLGAARA RVIADRAGDADTMQVHVEGTGLDATAIAAAVVDILKLKGEVICCAPGTLPRDGLVIED RRSYDT" gene complement(2076753..2077568) /locus_tag="SKA53_10419" CDS complement(2076753..2077568) /locus_tag="SKA53_10419" /note="COG0410 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, ATP-binding protein" /db_xref="CDD:10284" /translation="MPDSKETLLEVNNIEVIYNHVILVLKGVSLNVPKGGITALLGGN GAGKTTTLKAISNLLHSERGEVTKGSVIYRGEPVHHLSPEALVKKGVVQVMEGRHCFE HLTIEENLLTGAYTRRDGGAAVAADLEMVYTYFPRLKERRKSQAGYTSGGEQQMCAIG RALMSRPETILLDEPSMGLAPQLVEEIFTIVKNLNENEGVSFLLAEQNTNVALRFAHQ GYILESGRVVMEGPAAELRENPDVKEFYLGMSDEGRKSFRDVRSYRRRKRWLA" gene complement(2077620..2078903) /locus_tag="SKA53_10424" CDS complement(2077620..2078903) /locus_tag="SKA53_10424" /note="COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC branched amino acid transporter family, periplasmicsubstrate-binding subunit" /db_xref="CDD:10552" /translation="MKMKTLAVMALAGSMTAGTAMADLVIPDLSYRTGPYAAGGVPFS DGYQDYFALLNARDGGIGGEPVRVIECETAYNTERGVECYEATKGEGALIYQPLSTGI TYQLIPRTTADNIPLHTMGYGRTSAANGEVFNWVFNYPANYWDAASVAVNYLLDENGG SLDGKTIALVYHNSAYGKEPIRTLEDLSALHGFTLTQLAVDHPGQEQKSQWLQIRRER PDYVLMWGWGVMNQVAVQEAANIGFPMENFIGNWWAGAEHDVTPAGMAANGYKSLNMN PITDYPVLSEIQSLVHEAGNAAGDGSNLGSVLYVRGMYAAMLAAEAIANAQDIHGVAD VTPAMVRDGMEALEITNARMTELGMEGIGPEFAVTCQNHGGTGQGLVQQWNASAGVWE PLTGFISPDASVIAPLIAEDSAAFAAESGITPGCL" gene complement(2078961..2080037) /locus_tag="SKA53_10429" CDS complement(2078961..2080037) /locus_tag="SKA53_10429" /note="COG4177 ABC-type branched-chain amino acid transport system, permease component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, permease protein" /db_xref="CDD:13442" /translation="MLYREAGDFKTSYQADSQTFPIAFDRWRYWAVLVIAFCVVPFFV NAYWANAILVPFLIYAIAAIGLNILTGYCGQVSLGTGGFMAVGAYACYKLMTSFPDVS IVIHIILAGGITAAVGAAFGLPSLRIKGFYLAVATLAAQFFLVWMFNKVSWFYNYSAS GQINAPERFVAGIAVTGPNTAPWAQYMICLVFLTICALIARNLTRGTIGRSWMAIRDM DIAAEIIGVNPLKAKLTAFAVSSFFIGISGALFFAVYLGAVEVGEAFGIQKSFLVLFM IIIGGLGSLFGSFAGAAFLVLLPVALKVIGVDLLGWPTDLVAHLQLVIVGGLIMFFLI KEPHGLAQLWRVAKEKLRLWPFPY" gene complement(2080115..2081113) /locus_tag="SKA53_10434" CDS complement(2080115..2081113) /locus_tag="SKA53_10434" /note="COG0559 Branched-chain amino acid ABC-type transport system, permease components" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, permease protein" /db_xref="CDD:10430" /translation="MSADFLYGIEVVLNGLMAGVLYALVALGFVLIFKASGIFNFAQG VMALFAALTLVGIMEGQVPFAHLINAVFGTNIHHFGWQVPAILAIFLTVLVMIAFAWA VQHFVFRHLVGQEPIILFMATIGLAYFLEGVGDLMWGSSIRTLALGLPQGGSLWVEEM TNGLGGDDFYGFFIDKLDMVATLVALVLVAGLVAFAQYTKQGRAMRAVADDHQAALSV GISLSYIWVLVWSLAGIVALVAGVMWGAKSGVQFSLSLIALKALPVLMLGGFTSIPGA IVGGMIIGVGEKLFEYTIGAPYLGGATENWFAYMLALVFLVFRPQGLFGERIIERV" gene complement(2081200..2082018) /locus_tag="SKA53_10439" CDS complement(2081200..2082018) /locus_tag="SKA53_10439" /note="COG0411 ABC-type branched-chain amino acid transport systems, ATPase component" /codon_start=1 /transl_table=11 /product="branched-chain amino acid ABC transporter, ATP-binding protein" /db_xref="CDD:10285" /translation="MMDGVAPYVTADGRQIGGVLMDMRGITLRFGGVEAIKNISFDIR EGEIRAIIGPNGAGKSSMLNVISGFYHPQDGEVWFRGEKRKPMKPYQVARLGIARTFQ NIALFEGMSVLDNIMTGRLTHMKTGLLAQAIWKGRAEAEEVANREIVEKVIDFLEIQA IRKTPVGRLPYGLKKRVELARALAAEPKLLLLDEPMAGMNVEEKEDMSRFILDVNDEF GTTIALIEHDMGVVMDLSDRVVVMDYGRKIGDGTPDEVRNNQEVIDAYLGVAHE" gene complement(2082015..2083973) /locus_tag="SKA53_10444" CDS complement(2082015..2083973) /locus_tag="SKA53_10444" /note="COG1022 Long-chain acyl-CoA synthetases (AMP-forming)" /codon_start=1 /transl_table=11 /product="Long chain acyl-CoA synthetase" /db_xref="CDD:10750" /translation="MHAPADGGLVTIPDLLARNVARHGAKPAYREKEFGIWQSWTWAQ ASEQIDALAMGLLTLGANVGDHVAVSGRNRPALYWAMVAAQRIGCIPVPLYAEAAAEE IAYALDHCGARFAVVGDQEQVDKIADVRDGLTQLDHVIYLDGRGLRKYDHAAMTSYAD VQKAGRASGLLDQVNARSAARTYDDTCVMLYTSGTTGRPKGVVLSNRNVIETSKNSSE FDHLRADDEVLAYLPMAWVGDFIFSVGQAMWTGFCVNCPESADTMQLDLREIGPTYFF APPRVFEQQLTNVMIRMEDAGRVKKWLFHRYMAVGRRVGALLLDGKQVSAGDRLNYML AKLLVIGPLKNTLGLSRVRVGYTAGEAIGPEIFDFYRALGINLKQLYGQTEATVFITQ QPDGEVRSDTVGVPSPGVELRIAENGEVYYRSPGVFVEYYKNPESTASTKDADGWVAT GDAGFIEDGTGHLRIIDRAKDVGKMADGRLFAPKYVENKLKFYPNILEAVVFGANRDY CTAFINIDLTAVGNWAERNNIAYSSYQELSQHPRVLDMILGHVSEVNRSVAADPMLAG CQVHRFLVLHKELDADDGEMTRTRKVRRRIVEEKFHDLITALYGGAADIYTETEVTYE DGRKGKITATLAICDAQVAAEQHKVAAE" gene complement(2084118..2086883) /locus_tag="SKA53_10449" CDS complement(2084118..2086883) /locus_tag="SKA53_10449" /note="COG3383 Uncharacterized anaerobic dehydrogenase" /codon_start=1 /transl_table=11 /product="formate dehydrogenase, alpha subunit" /db_xref="CDD:12715" /translation="MSDQITFTLDGVTVTAVPGQTIWEVANGRGLVIPHLCHKPAPGY RSDGNCRACMVAIEGERTLAASCIREPRDGMVVTTDGPREVQARRMVMELLVADQPAQ DVAHDRSSHLWDMAGAQGVAVSRFPAKAEHIPLLDDSHVAMSVNLDACIQCGLCVRAC REVQVNDVIGMAGRGGTAYPVFDMDDPMGGSSCVACGECVQACPTGALLPATVTDENQ QGDTADYDREVASVCPFCGVGCQVSLKIKDNRVKFVEGINGPANEGRLCVKGRFGFDY IHHPHRLTKPLIRRADAPAKGLNVDPGNWQKHFREATWDEALDAAAGGLRAIGGTGVA GFGSAKCTNEEAYLFQKLIRQGFGHNNVDHCTRLCHASSVAALMENVGSGAVTATFNQ IEHSDVAIVIGANPIENHPVAATYFKQFAKRGGKLIVMDPRGQALKRHASHMLQFRPG ADVSMLNAIMHVIVEEQLYDRQYIAAYTENWEAEKAHLADFSPEKMAGICGIDAETLR DVARTFAGAKAAMIFWGMGVSQHIHGTDNARCLISLALMTGQVGRPGAGLHPLRGQNN VQGASDAGMIPMFLPDYQPVGDQGVRTAFQEVWQHGEIDATKGLTVTEILDAVHDGDI HGMYILGENPAMSDPDVDHARAALAKLSHLVVQDIFITETANFADVILPASAFAEKTG TVTNTNRQVQMGRPAVPPPGDAREDWWITVELAKRLGLPWTYAHPSEVFGEMTQVMAS LNNITWDRLEAQSAVTYPSLTPDDPGQPIVFADGFPRENGRAKFTPASVIAPDETPDA DYPMIMTTGRQLEHWHTGSMTRRSRVLDAVEPEANCSLHPSTLRRLGVEPGGMVRLTT RRGSIDIMARSDRAVAPDMVFVPFAYVEAAANILTNPAIDPYGKIPEFKFAAVRVEKA QSEVAAE" gene complement(2087025..2087423) /locus_tag="SKA53_10454" CDS complement(2087025..2087423) /locus_tag="SKA53_10454" /note="COG0762 Predicted integral membrane protein" /codon_start=1 /transl_table=11 /product="YGGT family protein" /db_xref="CDD:25898" /translation="MIPPDVNVNFDLGATLGLSDKAEPLRSVRQFQKGDLFMLTIIQA LLVIIGVVRFFVIAHFIMSWLIRFEVLNVRQQFVGQVWYTLERVLDPIYGPVRRMMPN MGGIDLAPVIVLVGLEILRIFLINNIGAFV" gene 2087517..2087996 /locus_tag="SKA53_10459" CDS 2087517..2087996 /locus_tag="SKA53_10459" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MEAHVSWHRCWPQDIDIYLEMNNGRILTIMDLGRTGLGIRTGLV AALRRNRWGLTMAGASVRYRKRIRPFTRFRMVSKCIGWDDKFIYLDQSIWIGQDCAVQ ILYRSAATDRNGIVKPERLLAEMGMRDPQPSLPDWVQGWIDADRVRPWPPVDHSPQP" gene 2088061..2089434 /locus_tag="SKA53_10464" CDS 2088061..2089434 /locus_tag="SKA53_10464" /note="COG2270 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:11976" /translation="MSVSKKRIWGWMAFDWASQPFYTLGLTFIFGPYFAVVAAQYYLG AGLDEAAANARAQWIWSAGQTVAGLLIAFSAPFLGAFADRSGRKIPWIAFFSVVYVVT TWMLWGLTPDGASLILILVLFYIGFIAAESALNFVNAILPSLGNDREVGRISGSGAAF GYWGGVVSLFLMLLLLAENDQGVTLLGNAPLFGLDPDLREGTRAVGPFIAIWYVIFII PFFLYVRDDPHAPRQSTNLRAVTGELIDTLRSVVKRKSLFNFLLGSMFYRDALNAVYA FGGVYAALVLEWQTIQIGVFGIIAAIAAAIVTWLGGLGDARYGPKPVITACVWVLIGV SVIIVGMSRQAMFGIPLPQGSPIPDMVFYVCGVFIGGAGGALYSASRSMMVRHTHPDR PAEAFGLFALTGKATAFLAPALITIFTIVTGSNQLGFLPIIFLFVIGLFLLRSVNKNG DRDAWSA" gene 2089422..2090318 /gene="mepA" /locus_tag="SKA53_10469" CDS 2089422..2090318 /gene="mepA" /locus_tag="SKA53_10469" /EC_number="3.4.99.-" /note="COG3770 Murein endopeptidase" /codon_start=1 /transl_table=11 /product="penicillin-insensitive murein endopeptidase" /db_xref="CDD:13090" /translation="MVRLTAALILSMGLAACQPDTPRIAVTQNAGDTRVAKVLFGAAP RPTAQSPSALGSYARGCQAGAVALPETGPTWQAMRLSRNRNWAQPITVDYVQDLSRFA ATLPGWNGIYVGDLSQPRGGPMLTGHASHQTGLDADIWMLPATRLDLSRAEREAISSI SMRRANGAYVNTDWTPQHEALIRAAASDPRTARIFVFPGAKVEMCNNATGDRSWLNKV RPWYGHHYHFHVRLNCPAGDATCVDQAPPPAGDGCAEAQDWVNTILNPPPPDPTAPPA LPRGELTMASLPGQCLGVLNAN" gene 2090392..2091243 /locus_tag="SKA53_10474" CDS 2090392..2091243 /locus_tag="SKA53_10474" /note="COG4222 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13494" /translation="MRLTALLPALWFALPAQSDPVLIGSHAWVLDDPRFGGFSAIEVS DDGDSFLALSDRGVFVRGQFARSGDQITGITAGPIVTVSGPGGQALTRAESDSEGLAI GADGTIYVSYEWTHGIRSFAAIDAPASDLMTTPAFDGMQTNASLEALAIDRDGALYTI PERSGGATQPFPVFRLRNGIWDQPFSIPRRGAFLVAGADIGPDGRLYVLERDFLGIGF RSRVRRFDLTGGNEQVLLETRLRAHDNLEGISVWQDEQGLRMTLISDDNFRAFQRTEI VEYRLTD" gene 2091317..2091958 /locus_tag="SKA53_10479" CDS 2091317..2091958 /locus_tag="SKA53_10479" /note="COG1738 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="membrane protein, putative" /db_xref="CDD:11449" /translation="MTRILPGVIAMAAIVVASNILVQFLILDGLLTWGAFTYPLAFLV TDVMNRVYGTQAARRVVFAGLIVGIICSLIGSQIMLQGDGYEYPAVALRIAIGSATAF AVAQMLDIAMFNRLRDGSWWKAPLGSTLVGSTVDTVIFFAIAFSAVFNGLSAAAADEI IWAQDAVPFLNAGPLVPLWVSLAVADWGVKLTIALLALLPFRLIVGRMQRAKI" gene 2092245..2092658 /locus_tag="SKA53_10484" CDS 2092245..2092658 /locus_tag="SKA53_10484" /note="COG1186 Protein chain release factor B" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10904" /translation="MRITDQIEIADWELTESFARASGPGGQNVNKVSTAVELRFEAER SPNLPDPVKRRLRRLAGRRWTNDGAIVIFVQDTRSQARNRDIARERLAELVLSATVVP KRRVATKPTYGSVKRRLKEKKVRGEVKAMRGKVDE" gene complement(2092706..2093947) /locus_tag="SKA53_10489" CDS complement(2092706..2093947) /locus_tag="SKA53_10489" /EC_number="2.4.2.11" /codon_start=1 /transl_table=11 /product="nicotinate phosphoribosyltransferase" /translation="MGFFDKFHRDGGGDFTILLIGSSRYINFLSGVFSIPAYSNIESL PPKVKIIEPEKIGLPADKKILVLTQYKARDPYSAVKGVESFLTLPRSFLFIYPSGLRE ALEDECIVIEGKTSKLHKISRKSTVSSLPSKSSMIKSASKSVKSFAEYALASEVMSDR KTMGMMLRSLNSASLAANSSDSETQLITLWSAFEALLPAPSKDDGKHVRIVHFNKLIV PCVARKYLLSKFQNCFSVCAASVGGSFQKVLDDHGAGASPAERLGSILIGEPAYQKML MKSLADSPLLMNRVWSLQRVLLNPKDGLGKTTTHESRVSWQVNRIYRERNDIVHSGSR SPFIAPLVENAFLYYRLVIRSLEDAFTRYNVYEPHSALQLISGQHSDAKDAIGQMLSN HKLNDEQKQLAFFKFVFQDQA" gene complement(2094510..2095802) /locus_tag="SKA53_10494" CDS complement(2094510..2095802) /locus_tag="SKA53_10494" /note="COG1488 Nicotinic acid phosphoribosyltransferase" /codon_start=1 /transl_table=11 /product="Nicotinate phosphoribosyltransferase" /db_xref="CDD:28011" /translation="MVDIATRVWNHKWKIDPIVRSLIDTDFYKLLMCQSVFRNHPDTQ VTFSLINRTKTIRLADLVDEGELREQLDHIRSLRLTRGESTWLRGNTFYGKRQMFTPA FMTWFENLQLPPYHLEKIDGQYELTFEGSWPEVMLWEIPALAVIMELRSRAVLKTLGR FELQVLYARAMTKLWEKVEDLRHIPDLRLADFGTRRRHSYLWQDWCVQAMMEGLGANF TGTSNCRIAMQREIEAIGTNAHELPMVYAALADSDEALRHAPYAVLADWQEEHDGNLR IILPDTFGSKGFLDRAPDWLAGWTGIRVDSGDPAAGAETAIAWWQSRGEDPRQKLVIF SDGLDVAKIIELHQQFAGRVRVSFGWGTMLTNDFIGLVADDALAPFSLVCKAVSANGR PTVKLSDNPNKAMGPLDEIARYKRVFGVGDQKRVEVVV" gene complement(2095859..2096791) /locus_tag="SKA53_10499" CDS complement(2095859..2096791) /locus_tag="SKA53_10499" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="glycosyl transferase" /db_xref="CDD:25539" /translation="MTVSIIIPTYNRPALLQRAVVSALAACPQDGEVIVIDDRSDTAQ TALCDVTDPRLRITTNTGDKGAAGARNHGIAQAKGEIVMFLDDDDVMVADYPGRVLAA AAQSGADWGFARLAEINGIDQPLSLARYDETPRISSGLVGDDVPILDRLPAFSQGFWI RRQVFTELGPIYVDQKLDEDTDYCFRLYGHRQKAWFETEPGCIYSRSYAVSGSDAPQL TRGSDKLIESQCHLRTFQRNQNYFKTHSAEQWALIRRCLRFAAYNGVKETPKILLRDL QPFRLRLRAWLFWQIKCAGKKRYQRRIAHNTLQA" gene complement(2096788..2097381) /locus_tag="SKA53_10504" CDS complement(2096788..2097381) /locus_tag="SKA53_10504" /note="COG1335 Amidases related to nicotinamidase" /codon_start=1 /transl_table=11 /product="pyrazinamidase/nicotinamidase" /db_xref="CDD:27794" /translation="MTHALIVIDVQKDFCPGGALAVAQGDQIVPGINVAMSDFDIVVL TQDWHPAGHSSFASTHGAAPMSMMDMRYGPQVLWPDHCIQGSLGAQFHPDLTVDRADL ILRKGHNPAIDSYSAFFENDRNTPTGLEGYLRTRGIDRITLVGLATDFCVAYSALDAA KLGFDVMVRLDLCRAIDFDGSLARAKADMQAAGVVLV" gene 2097373..2098737 /locus_tag="SKA53_10509" CDS 2097373..2098737 /locus_tag="SKA53_10509" /note="COG0443 Molecular chaperone" /codon_start=1 /transl_table=11 /product="heat shock protein, Hsp70 family" /db_xref="CDD:10317" /translation="MCHGGFPVLLHPQSAIDLSQAKPEGLRLACNFPIGGIFAGGMMA TLGIDFGTSNTAAGVMVAGRPHLIAVEPAQSTLPTSVFFDPDRKVTLYGSAANAALIE GREGRFMRALKSVLGTPLLRERRMIAHERLTLLEVVARFLAMIRAKAEAETGQTYNHA LSGRPVRFHSADPARDAQAELDLHEAYLLAGFRDVTFMNEPEAAALAAGPLDKGALGL VIDIGGGTSDFTIFERDGSATRIVASHGVRVGGTDFDRALSLAQVMPLLGRGAEIGNA IGNGRHLAPNAIYNDLATWQKIPFVYTPENRRMAAGFAKQGVDPALFARLQTVLDMEL GHDIAFAVEAAKIRLNAPDTDQTGIDLRFVASDLWAQTLKAEMDAALSDHTAAIRACA VDTLAQAGITPDRIAKIVFVGGSSLLQAVEASVSQLFPQAALERGEAFTAVVDGLALA SGPS" gene 2098770..2099675 /locus_tag="SKA53_10514" CDS 2098770..2099675 /locus_tag="SKA53_10514" /note="COG1054 Predicted sulfurtransferase" /codon_start=1 /transl_table=11 /product="rhodanese-like domain protein" /db_xref="CDD:10779" /translation="MYIVAALYHFTRFADPATLRGPLLDLCRARAISGTLLLAGEGIN GTIAGDRAGVDAVLAHIRALPGCADLDWKESTAVDAPFHRMKVRLKREIVTMGQPDID PVSRVGHYVEPADWNDLISAPDVAVIDTRNDYEVAIGTFDGAIDPQTKSFGEFPAWWE ANKHRFHNKRIAMFCTGGIRCEKSTNYLMGQGVEDVYHLKGGILKYLEEVPQDASKWD GECFVFDGRVSVGHGLAEGPHILCHGCRRPLLPEDRHHPAFEQGVSCHHCVDETTTQD KARFRERQKQIALAKGRGVRHIGGL" gene 2099662..2100708 /locus_tag="SKA53_10519" CDS 2099662..2100708 /locus_tag="SKA53_10519" /note="COG3180 Putative ammonia monooxygenase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12518" /translation="MAGFDRKTALALLLGLTGGVVAYFVGLPLPWMLGPMIANVAAAM LRAPVKGPAGLRNIVVPVIGVLLGSGVTAELFGLVSTWVLTLALLPPFLLVAAGVSFL IYRRVGGYDPVTAYYAAMPGGLNEMILLGAEAGGSERQIALAHAARVMIVIIFVALFF GLVLGVSAGGTGGANWTALDALSLRDYAVLGLCAIAGAWLGKIARLPAAPVFGPMILS AIAHYTGLVTVPPPSLFVIAAQLTIGTVIGTRFVGAKMADLRRELGLAALASGIMLAI ALGFAEVIVLAGGMPLAQAFLAYAPGGLTEMSLLTLAMGQDATYVSVIHVIRITLVIA AAPLVFAMIRKRAL" gene 2100709..2102805 /locus_tag="SKA53_10524" CDS 2100709..2102805 /locus_tag="SKA53_10524" /note="COG1770 Protease II" /codon_start=1 /transl_table=11 /product="PtrB, protease" /db_xref="CDD:11481" /translation="MEALMFKHLPNAPLAGKRPTTATAHGVTLRDDFAWLRADNWQEA MRDPAKLPSDIADYLTAENGYYDAAMADTADLQTALIAEMRGRIKEDDTSVPRKNGAY AYVMRYSEGAEHPVYIRTPRNGGDEVVLLDVNAEAAAHEYFDLGAVAVSPDHEVLAWK ADTTGSEFFTLRLRDTTTGQDSATLIADVGSVAWANESTLFYVRVDAQHRPNKVFRHT IGSDPADDVLVYEEKDPRYFVGVSRLRSGAYVQIATGMNDENEVWVIPTATPDAQPAL IAARTEGLEYEIDHQGDQFVILTNAGGAVDFKIVTAPTATPQRAHWVDRVPYRAGRMV IGLAAYRDWLIWVERENALPRICYQGRSGPVQSIAFDEEAYALGADPSAEYDTDMFRF TYSSPTTPSQVFDFDLSSGDRVLMKQVELPSGHDPADYVTRRIMAPSHDGALVPVTIL HHATTLLDGTAPCLLYGYGSYGASMPAGFSANRLSLVDRGFIYAIAHVRGGEEKGRAW YEDAKFGRKVNTFHDFIGAAQSLIDEGYTGKGRIVAQGGSAGGLLVGAVVNMAPDLWA GIIADVPFVDVLTTILDDTLPLTPGEWSQWGNPIESRAAFDDIRAYSPYDNVTEQDYP AMLVTAGVSDPRVTYWEPAKWVAKLRTTKTDDNILLLKTNMTSGHFGKTGRFAALEDA ARSYAFAIKAVGRMVG" gene complement(2102868..2105192) /locus_tag="SKA53_10529" CDS complement(2102868..2105192) /locus_tag="SKA53_10529" /note="COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /db_xref="CDD:10062" /translation="MYIGDTDDGSGLHHMVYEVVDNGIDEALAGHADHVYVRINADSS VTVGDNGRGIPVGIHEGEGVSAAEVIMTQLHAGGKFDSNSYKVSGGLHGVGVSVVNAL SDFLELRIWREGKEHYARFEGGFTVESLRVVGDANGRKGTEVTFLAALTTFSNRDFDF HILEKRLRELAFLNSGVRIILEDLRPAEPLRNELFYEGGVREFVKYLDRSKTPLMETP IYVTGERDDIGVEVAMWWNDSYNEMVLPFTNNIPQRDGGTHLAGFRGALTRAIIKYAT ETGITKKEKIALTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVENLMGEK LNEWFEENPATAKSIISKIVEAAAAREAARKAREIRRKSAMDVNFNASKLKDCSEKDP SKTEVFLVEGDSAGGSAQTGRDRGTQAILPLKGKILNVERARFDRMLGSQEIGNLVMA LGTGIGRDEFKIDKLRYHKVIIMTDADVDGAHIRTLLLTFFFRQMPELIEGGHLYIAQ PPLYKVTRGRSEVYLKDQAAMDEYLIEQGIDGAMLRQGNGEEIAGADLRRIVDEARQL KRVLEAFPTHYPRHILEQAAIAGAFVPGVVENDLQGTADRVAQRLDLVALEWERGWQG RITQDKGMRLARILRGVEEVRTLDGTMLRSGEARRTGTFTQSLQDVYNLPATLVRKDR SQLIHGPLDLLRAILEEGEKGLSLQRYKGLGEMNPDQLWETTLDPDARTLLQVKVEDV AEADDLFTKLMGDVVEPRREFIQTNALNVENLDF" gene complement(2105376..2105972) /locus_tag="SKA53_10534" CDS complement(2105376..2105972) /locus_tag="SKA53_10534" /note="COG1280 Putative threonine efflux protein" /codon_start=1 /transl_table=11 /product="transporter, LysE family" /db_xref="CDD:10996" /translation="MLYAGALLILFVTPGPVWVALLARSLSGGFAAAWPLAVGVALGD IFWPLVAILGVTWLVSAFAEVMMVMKWIAVAVFIVMGIGLIRSGGHTLRADSRLTRPG RWAGFVAGVAVILGNPKAVLFYMGVLPGFFDLTQVTLTDVVAICTLSFVIPLVGNLLL AGFIGRMRGALKSPETLRRINLVAGCLLVAVGAVIAIS" gene complement(2105993..2107093) /locus_tag="SKA53_10539" CDS complement(2105993..2107093) /locus_tag="SKA53_10539" /note="COG1195 Recombinational DNA repair ATPase (RecF pathway)" /codon_start=1 /transl_table=11 /product="recombination protein F" /db_xref="CDD:10913" /translation="MTGLALLQLTLSHLRSHKRAVLDLDPRPLAIFGPNGAGKTNILE AVSLLSPGRGLRRAGADDLARRPEALGWKITGVLQSLYQVHEIETWAEAGQPRQLRID GKTAPQVALGRIARVLWLVPAMDRLWTEGADGRRRFLDRATLSFEPGHADVVLTYEKA MRERNRLLKDMVRDPHWYAAIEGQMAAAATQITANRTKAIAALMAAQAAAVSAFPTAQ LTLTYSDPLPTDLQSALADHRSRDMAAGRTLLGPHRADLDAVFADKHVPARDCSTGEQ KALLISLILANARALAQDFGAPPILLLDEVAAHLDATRRAALYDEICALGAQAFMTGT GPELFAELGSRAQYAEVTETHGQSAVERKDAV" gene complement(2107134..2108252) /locus_tag="SKA53_10544" CDS complement(2107134..2108252) /locus_tag="SKA53_10544" /EC_number="2.7.7.7" /note="COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit beta" /db_xref="CDD:28483" /translation="MKFSIERAVLLKAVAQAQSVVERRNTIPILANVLIEAQGDEVHF RATDLDIEIVDKAPAKVDRAGATTVSAVTLNEIVRKLPDGALVTLTEESATGRLTIEA GRSNFSLATLPKEDFPVMASSDYAANFSAKAPVLRRLFDKSKFAISTEETRYYLNGVY MHVADGENGKVLRCVATDGHRLARIDAELPMGAENMAGVIVPRKTVGELRKLLDDDDM KIAVSVSETKIRFATPDITLTSKVIDGTFPDYTRVIPQGNTRRLEVDASEFARAVDRV ATVSSERSRAVKLSLDEDRLILSVNSPDSGAAEEELAVAYSDERLEIGFNAKYLLEIA SQVDRENAVFMFNSSGDPTLMREGNDMSAIYVVMPMRV" gene complement(2108366..2109709) /gene="dnaA" /locus_tag="SKA53_10549" CDS complement(2108366..2109709) /gene="dnaA" /locus_tag="SKA53_10549" /note="COG0593 ATPase involved in DNA replication initiation" /codon_start=1 /transl_table=11 /product="chromosomal replication initiation protein" /db_xref="CDD:10463" /translation="MTNDIWAKVLLTLKGALGVNNYSNWIEPLEFAQLADGVAVFHVP TNFIGNYVSQNFGDQIIYQLGQQGEDVQRLQFKVPVSAQVTLKPAPKPTARIVNVDDI SGSPLDARFTFDTFVVGKPNELAHAAARRVADGGPVTFNPLFLYGGVGLGKTHLMHAI AHELQRRSPELNVLYLSAEQFMYRFITALRERKMMDFKQLFRSVDVLMVDDVQFIAGK DSTQEEFFHTFNALVDGQKQIIISADRAPGEIKDLEDRIRSRLQCGLVVDLHPTDYEL RLGILQSKVDAFSAQYPGLAVAPGVLEFLAHRISTNVRVLEGALTRLFAFASLVGREI NLELTQDCLSDVLKASDRKVTVEEIQRKVSEHYNIRLSDMIGPKRVRNYARPRQMAMY LAKQMTSRSLPEIGRRFGGRDHTTVMHGVRKIEELKLLDSQIADDLELLRRALEA" gene complement(2110296..2110493) /locus_tag="SKA53_10554" CDS complement(2110296..2110493) /locus_tag="SKA53_10554" /note="COG0268 Ribosomal protein S20" /codon_start=1 /transl_table=11 /product="ribosomal protein S20" /db_xref="CDD:10143" /translation="MRRSRIRTFLRKVEEAIATGDQTVAIAALRAAQPELMRGVTKGV VHKNTAARKMSRLSARVKAIG" gene complement(2110708..2111484) /locus_tag="SKA53_10559" CDS complement(2110708..2111484) /locus_tag="SKA53_10559" /note="COG1024 Enoyl-CoA hydratase/carnithine racemase" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase" /db_xref="CDD:10752" /translation="MAYENIIVDTRDDVATITLNRPDALNALNGDLLRELCTALEEAD TSDKVRCIIITGSEKAFAAGADIAEMADKTFVDLYTTRFFENETDRFNRTRKPIIAAV AGYALGGGCELAMMCDFIIAADTAKFGQPEINLGVIAGLGGTQRLTRFVGKSKSMDMH LTGRFMDAAEAERSGLVSRVVPAKDLLGEARKAAVKIAAKSQIAAIAAKDAVNRAFET TLAEGLQYERRLFQSMFATDDQTEGMTAFLEKREAQFRDR" gene complement(2111546..2112397) /locus_tag="SKA53_10564" CDS complement(2111546..2112397) /locus_tag="SKA53_10564" /note="COG0266 Formamidopyrimidine-DNA glycosylase" /codon_start=1 /transl_table=11 /product="formamidopyrimidine-DNA glycosylase" /db_xref="CDD:10141" /translation="MPELPEVETVKAGIAPVMTGQLIAKAEVNRPDLRWPFPENMADR LTGRRVLGLRRRSKYILVDLDSAETLLIHLGMSGRILVSGAAQGAFYHPHPAPAKHDH VVLHMDGGARITFNDARRFGAMDLMPTAAQDDHWLIRDLGPEPLGNAFDETYLVARLK GRNTPIKSALLDQRIVAGLGNIYVCEVLFRAGIDPRRKAGQIAARRVASLVPLIRDVL HEAIAAGGSSLRDYRQSDGELGYFQHGFQVYDREGAPCVTPDCARPISRIVQSGRSSF FCAQCQR" gene 2112483..2113235 /locus_tag="SKA53_10569" CDS 2112483..2113235 /locus_tag="SKA53_10569" /note="COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis" /codon_start=1 /transl_table=11 /product="ubiquinone/menaquinone biosynthesis methyltransferase UbiE" /db_xref="CDD:11933" /translation="MTDDTEKTTHFGFDTVREDEKAGRVQGVFSSVASKYDIMNDVMS GGIHRIWKDAMMDWLAPRPGQRLLDVAGGTGDVSFRFLKRAGRGHATVLDLTESMLVA GRKRAEAAQMSDSLDWVVGDAMALPFEANTFDVYTISFGIRNVTRPQDALAEAFRVLK PGGRLMVLEFSQIPNPMLQAAYDAYSFNVIPRMGQIIAGDRDSYQYLVESIRQFPDQD TFLGMVRDAGFGNAKYRNLTMGVAALHSGWKI" gene 2113303..2114766 /locus_tag="SKA53_10574" CDS 2113303..2114766 /locus_tag="SKA53_10574" /note="COG0661 Predicted unusual protein kinase" /codon_start=1 /transl_table=11 /product="2-polyprenylphenol 6-hydroxylase" /db_xref="CDD:10530" /translation="MKVILDAFDVGLLLRITLRSLVWPFQWLGYKGDPSMPPAPRALT ALGPAYIKFGQILSTRPDVVGEDMAVQLRVLQDKLPPFSMAEAKAEIQRELGMPVEKL FSTFSAPVAAASLAQVHKAHLADTGEAVAVKILRPGIEKAFRRDIDAFYFAARTIEVL SPSSRRLRPMDVITHFEGVVMGELDLRLESSAAAEFAANTKDDLGFTVPQVRWHLSGR RVMTLDWAEGIGIGDNAALDAAGHDRRALADRVLGLFLNHALRDGYFHGDMHQGNLKV SATGEIIAYDFGIMGRIDEYTRRVYAEILFGFIRKDYQRVAEVHFEAGYVPANRDVDE FARALRAVGEPIFGMDASRISMARLLAYLFEVTERFGMETRTELIHLQRTMVVVEGVA RSLDPRMNIWEVAKPVVEDYIKQSIGPKALLRDLGRTAMILSRFGPQLPRLAEQALIR LNNPAPEPKPQRRIARLSWMALGGVLVGGAMWLGQMM" gene complement(2114880..2115431) /locus_tag="SKA53_10579" CDS complement(2114880..2115431) /locus_tag="SKA53_10579" /note="COG1843 Flagellar hook capping protein" /codon_start=1 /transl_table=11 /product="Possible FlgD protein" /db_xref="CDD:11553" /translation="MLTAQMKNQDPLNPVESADFATQLATFSGVEQAVLTNDLLRGLS LQIGVSGLASWVGKEVRAPAPVYFDGAPVTLHPNPMAAATAGEIVVRDASGAVVHRFA SPATTDPVQWDGVGRNGVVVPDGVYSFAFASLSDGEVLGENPVETYNTVTEVQSFAGQ TSLVAHGGIMIRVGDVTALRSPS" gene complement(2115543..2116850) /locus_tag="SKA53_10584" CDS complement(2115543..2116850) /locus_tag="SKA53_10584" /note="COG3144 Flagellar hook-length control protein" /codon_start=1 /transl_table=11 /product="flagellar hook-length control protein" /db_xref="CDD:9386" /translation="MSQAVELYLTGHCMLVPHLIPAASALPVAPAGAVALAGQNDFQL TYDAAAGLAAVDPQPLIEVVIMPPDQTVSVGSDPDMLMLADDVTGEMGADLVPLTTAE PVKIAGSPDQKGAVPFLPAGDPRLPVKITQHALIQMMFDQPAAPAAPPPADAADVAAL VTVLPGARQPVSAEEIARAGLADTDAGPTKRETAIKEGAPVARIASTVAAQPTIAPSP VAAQMPSSAPLATRDIPEPLPPATVMDRTVPMSPVATAIKRPELVIPIVKGLDPKVDA ALGGDESTLPFAPAGDTASGVAKTSEAQSAPGLARHVAQQLAVTITQTAGQPTEIALN PEELGRVRMSMSLTDGTLMLHINAERPETADLLRRHIDTLAQEFRSLGYNDISFDFGD GRTQDEARHDASPLTENAEDTTETQAPEQTGMRQPRGGLDLRL" gene 2116915..2117208 /locus_tag="SKA53_10589" CDS 2116915..2117208 /locus_tag="SKA53_10589" /codon_start=1 /transl_table=11 /product="flagellar protein FlgJ, putative" /db_xref="CDD:13257" /translation="MTIIPVLSPPRGPIAIPESLRGDTKLREAAQKLEATFLAEMLKS AGLGTSRPAFGGGIGEDQFSSFLRDAQSIELAKSGGIGLAESLFNAMKRSIDA" gene 2117201..2117542 /locus_tag="SKA53_10594" CDS 2117201..2117542 /locus_tag="SKA53_10594" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRDPTVSELRSVLAAETAAILAGQYAQLDDLAARKDQLFNALQQ APRAAADLRAISRMLARNQALLAAALKGISAARLRLTALKAVRDGLQVYDQSGRFAAS PITRPDLVRKA" gene complement(2117927..2118322) /locus_tag="SKA53_10599" CDS complement(2117927..2118322) /locus_tag="SKA53_10599" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNDILVPADPADLIDRIVDLQLRLDAADDPVLQTELRRQHGLLS RLADRIMPPDDVLADLIQQLGDARRDQMTLIKDLQNCDASKEYGIAFVALSQALLATI ASAAEARTGINQCYARHVAGSVTGVLRDS" gene 2118574..2119485 /locus_tag="SKA53_10604" CDS 2118574..2119485 /locus_tag="SKA53_10604" /note="COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases" /codon_start=1 /transl_table=11 /product="putative bacteriochlorophyll synthase, 34 kDa subunit" /db_xref="CDD:16879" /translation="MSVMSDLPLNRTTRRWPEPRAMVWLIKPVTWFPPMWALLCGIVS SGAAFTGNWTLILLGVLLAGPIVCGMSQAANDWCDRHVDAINEPDRPIPSGRIPGRWG LWIALAMTGLGLGVGYTLGPWVFGATVLAVLAAWAYSAEPVRAKKSGIWGPALCGLAY ETLPWITGAAILTSGAPSVPVIMIAVLYGLGAHGIMTLNDFKAVEGDRAMGLRSLPVT LGADRAARVACWVMAVPQIAVIGLLVTWGYPFHALGIGAMLAVQLAAMRVLLRDPLGK AQWYQGMGILFYISGMMIASFALGAMA" gene 2119482..2120762 /locus_tag="SKA53_10609" CDS 2119482..2120762 /locus_tag="SKA53_10609" /codon_start=1 /transl_table=11 /product="putative light-harvesting 1 (B870) complex assembly protein PucC" /db_xref="CDD:4968" /translation="MNLTWVQIIRLGLVQMALGAIVVLMTSTLNRLMVVELALPAVIP GMLVALHYGVQMSRPKWGHASDAGGQRTRWIIGGMVALGAGAMAATVGLVVLEASFTW GMVLSIAAYGLIGVGVGASGTSLLALLATTTAPHRRAAAATITWLMMIFGIAMTAGIV GTLIDPYTPLRLIEIVAAVVLIAIGVTTLAVWGIERGLKVTREPDPTPFREGLAEVWA EPKARNFTMFVFLAMTAYFMQELILEPYAGLVFGLTPGQTTSLSGAQNGGVFIGMLTV GIMATGLKIGALRNWVMAGCLGSAGALAIITLLGPLGPGAPILPAVMTLGFFNGMFAV AAIGSMMALAGEGRERREGTRMGLWGAAQAIAAGFGGLVGAAMADILRLTLTDTQAFG AVFLFEASLFIAAAVVAAKIMDRKMPSATLVPGE" gene 2120766..2121947 /locus_tag="SKA53_10614" CDS 2120766..2121947 /locus_tag="SKA53_10614" /note="COG0644 Dehydrogenases (flavoproteins)" /codon_start=1 /transl_table=11 /product="Geranylgeranyl hydrogenase" /db_xref="CDD:10514" /translation="MQYDVVVVGAGPSGATAAEDLARSGHKVAFIDREGRIKPCGGAI PPRLIADFFIPDDQIVAKVNTARMISPTGRQVDIPIENGYVGMVDREHFDSFLRQRAQ DAGAHRYAGTFTKITRDADGTHVVYRDKISGNDMRLTTKLVIGADGARSNVARAEIKD GDKIPYVIAYHEIIEAPAANATYDPLRCDVVYDGRISPDFYGWVFPHGAQASVGMGSM LKSVDVKQATADLRAASGLTDCKTIRREGAPIPLKPLDCWDNGRDVVLAGDAAGVVAP SSGEGIYYAMVGGRVAATAAAACLASGRVKDLQLARKLFMREHKQVFRVLGAMQNAYY RSDERRERFVSLCHDVDVQKLTFEAYMNKKLVKARPMAHLKIGIKNLAHLTRLVSPLR T" gene 2121953..2122477 /locus_tag="SKA53_10619" CDS 2121953..2122477 /locus_tag="SKA53_10619" /note="COG1443 Isopentenyldiphosphate isomerase" /codon_start=1 /transl_table=11 /product="Isopentenyl-diphosphate delta-isomerase" /db_xref="CDD:11157" /translation="MIPAWVNGKLQPVEKLDAHQRGLKHKAVSVFVMNRGRVLIQQRA LEKYHTPGLWANTCCTHPEWNEDPAACALRRLDEELGITGLYPTHRDQIEYRADVGND LIEHELVEVYVADAPNNLRITPNPSEVMATRWVDFYDLSADVTRHPEHYTPWLQIYLR DYQDAIFGDLMRAV" gene 2122508..2123059 /locus_tag="SKA53_10624" CDS 2122508..2123059 /locus_tag="SKA53_10624" /note="COG3703 Uncharacterized protein involved in cation transport" /codon_start=1 /transl_table=11 /product="ChaC-like protein" /db_xref="CDD:13023" /translation="MGMTGKGSFMWVFGYGSLLWNPGFTPVRRVTARLPDYHRSFCML SIHHRGTPDHPGLVLALDHQPGGQCTGVAFQVAPQDQDEVLAMLRERELVSSAYVEQE VPLICDTGDQVTALAYVVDRTHIQYCQFDLEQQAQMIAHATGGRGPNTEYLYNTVTHL AEIGIKDADMAWLADRVRALTAT" gene 2123215..2124297 /locus_tag="SKA53_10629" CDS 2123215..2124297 /locus_tag="SKA53_10629" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLIVIGLLGAGIYLGLEQITAIYLSNPYLNGVILGVFVLGVLSC FNQVFLLMNSVRWIELFARETGGHSFTAAPSLLAPLATLLRSRGARTQVSSSSGRSIL DSVAQRIDEDREITRYIGNLLIFLGLLGTFYGLATTVPALVETIKSLNPGDGESGADI FGRLQVGLENQLGGMGTAFSSSLLGLAGSLVVGLLELFAGHGQNRFYRELEEWMSTIT RVGIDGDDSAGTGGAATTAMVEQMGEVMDTIQLLLAQNEADRAATDNRFQALAEAITT LMQVTTTQDTSASLARVADGQATLIQKLDDSGMDGIDAESRMRLRSIDVQLLRILEEL SAGRQESIGALRHDLATLASAIRDRG" gene 2124301..2125902 /locus_tag="SKA53_10634" CDS 2124301..2125902 /locus_tag="SKA53_10634" /note="COG1360 Flagellar motor protein" /codon_start=1 /transl_table=11 /product="flagellar motor protein" /db_xref="CDD:11076" /translation="MALSRRSSNRFQNAIWPGFVDAMTGILLVLMFVLSIFMVIQFTL RETITGQESELDLLSGEMTALAATLGLERARTATLSTDLDAANAQAARQANQIASLIA QRAAQDQALAQAQNQITSFEAQVAGLLSDQRQARDTISGLEAAQDQLLSDQEALNLAL AQARDEIDAGAETARLAAARREALEALIVDLETARDENAARISTFEAKRIADAAAAAA LRARLENADAELTAMTLNLERQRREAEETLTLLAAARTAQATLAADRTEALTEAERQA ALLATATAALSEQKAQSDASQRQVAVLNEQILALRNQVGNLQSLLNIAEDSDRAAQVQ IETLGAQLNTALARVVSEERQRIALEEAERSRLEAEAARLQAEAENLERFRSDFFGQL RQVLEGQDRIRIEGDRFVFSSEVLFEVGRADLSPQGRDEIANVAGILNDIADDIPAGI DWIIRVDGHTDDNPIAAGGRFADNWELSQARALSVVRFMVDDLGIPPMRLAANGFGEY QPLNTADTAQARAQNRRIELKLTER" gene complement(2126093..2127034) /locus_tag="SKA53_10639" CDS complement(2126093..2127034) /locus_tag="SKA53_10639" /codon_start=1 /transl_table=11 /product="type I secretion target repeat protein" /translation="MDYGFIVRDSNGIDYFVGKVKVSVLADSLYNGSVMSEGWNPVTQ EWVGPPPIGTTFTLISVGNDYPGGFNPWQRGGGGLREGPTGFNPYSNDVRLGSGVAAP VLKTGFFPFCFAAGTLIETETGPRLIEELLPGDRILTCDAGLQELRWVGRRHISSDVL SRMPKWCPVRISAGALGAGLPKRDMMVSPQHRVLIRSRIAQRMFDADEVLVAAKDLVG LPGIARADDITDVDYIHLMFDAHRIVLAEGAPMESFYLGPMVLRSLDIATRNELLELF PDMENETAAFARPVVTGGPARNLVSRHQRNAQPLVFA" gene complement(2127526..2128512) /locus_tag="SKA53_10644" CDS complement(2127526..2128512) /locus_tag="SKA53_10644" /note="COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components" /codon_start=1 /transl_table=11 /product="ABC transporter, periplasmic substrate-binding protein" /db_xref="CDD:10584" /translation="MKKTMIAAALAAGLGGVAQAQDNDVSLQLQWVTQSQFAGYYVAL DQGYYEDEGLNVTILPGGPDIAPPQVLAGGGADAMLNWMPSALAARERGLPVVNIAQP FKTSGLMLTCWKDTGIESVEDFRGRTIGVWFFGNEYPFLSWMAQAGIPTDGGPDGVTV LRQGFNVDPLLQRQADCISTMTYNEYGQVLDAGVNPDELITFMYEDQGVATLEDGIYV LEQNLEDPVFVEKMVRFVRASMKGWKWAEENPEAAGAIIIEYDETGAQSEAAQVRMMQ EVAKLTAGSNGALDPADYERTVATLLGGGSDPVISAAPTGAWTHLITDQALN" gene complement(2128555..2129406) /locus_tag="SKA53_10649" CDS complement(2128555..2129406) /locus_tag="SKA53_10649" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein" /db_xref="CDD:10470" /translation="MTGPALISVLAVWVVGWFINARLAVSRMSDARIIRVLVPVIFGL TLLLIWELLVRMTGVSPIVLPPPSMIAERFANSLPILWVDFEQTIVKGAMTGYVIGMI CAFAVAVLADRSDFLTRGILPVGGFMAALPIVGIAPIFVKWLGSDWESKAAVVAVMVF FPILVNIVAGLRDTSAMQRDLMRTYGAGYWQTLFKLRLPAAMPFIFNGLKIATTLALI GAIVAEFFGSPTVGMGFRISTSVGRLALDMVWAEIVVAAIAGSTLYGAVAWIEGRVTF WHPSQRK" gene complement(2129403..2130323) /locus_tag="SKA53_10654" CDS complement(2129403..2130323) /locus_tag="SKA53_10654" /note="COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein" /db_xref="CDD:10470" /translation="MKSLFPILTIVAAILVIWVLAVVPMNMHLTADQAQRDGLMVMPQ TPAERQGYSGLGLSFANAGLIPLTYTLDRPRLPSPHQVAGEMWETIALRNVTSRQSLV YHGWVTLSATLVGFAIGTTLGILLAVGIVHNRAMDMSVMPWAIASQTIPILALAPMII VMMGQFGIQGLLPKAVISAYLSFFPVVVGMVKGLRSPDAMQMDLLRTYYASSSQGFWK LRLPASVPYLFASFKIGISAALVGAIVAELPTGARAGFGARMLVGDQYGNPLVTWAAL FAAAITAAALVAIFTAMERLTLRRMGMAAA" gene complement(2130372..2131154) /locus_tag="SKA53_10659" CDS complement(2130372..2131154) /locus_tag="SKA53_10659" /note="COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /db_xref="CDD:10838" /translation="MTADTVISAQGLNLTFQTNDGPVHALKDVNLDIRKGEFISFIGP SGCGKTTFLRCIAGLETPTDGTLSVNGMTPDQARRARAYGYVFQAAGLYPWRTIGGNV KLPLEIMGFSKSEQAERVARVLALVDLAGFEKKFPWQLSGGMQQRASIARALAFDADI LLMDEPFGALDEIVRDHLNEQLLALWARTEKTIGFVTHSIPEAVYLSTKIVVMSPRPG RITDVIDSPLPKERPLDIRDSKEFIDIAHRVREGLRAGHVDD" gene complement(2131154..2132608) /locus_tag="SKA53_10664" CDS complement(2131154..2132608) /locus_tag="SKA53_10664" /EC_number="3.5.2.2" /note="COG0044 Dihydroorotase and related cyclic amidohydrolases" /codon_start=1 /transl_table=11 /product="dihydropyrimidinase" /db_xref="CDD:28175" /translation="MTTVIKNGTIVTADLTYKADVLIDGGKIIEIGQNLSGDEKLDAT GCYVMPGGIDPHTHLEMPFMGTYSADDFESGTRAALSGGTTMVVDFALPAPGQGLHDA LQMWDNKSGRASCDYSFHMAVTWWGEQVFNEMESVVRDRGINTFKHFMAYKGALMVND DEMYASFARLASLGAIAMVHAENGDVVAELSAKLLAEGNTGPEAHAYSRPPQVEGEAA NRAIMIADMTGVPLYIVHVSCEEAHEAIRRARMQGKRVWGEPLIQHLTLDESAYFNQD WDHAARRVMSPPFRNKMHQDSLWAGLQSGSLSVVATDHCAFTTAQKRYGVGDFTKIPN GTGGLEDRMPMLWTHGVRTGRLTMNEFVAVTSTNIAKILNCYPRKGAVLVGADADLVV WDPEKSKTIMAKSQQSAIDYNVFEGKEVTGLPRFTLTRGHVAVHDGEMRTREGHGQFV KRAPNTPTNTALSKWKELTAPRPVERTGIPATGV" gene complement(2132663..2132992) /locus_tag="SKA53_10669" CDS complement(2132663..2132992) /locus_tag="SKA53_10669" /note="COG2827 Predicted endonuclease containing a URI domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12180" /translation="MSIYHLVIRSSQNCDMTHFVYIMASRPNGAIYIGRTRDLHSRVQ HHRDGRSVHTAKYKIKTLVWFETHDDFDTSLRRERAIKRWRRAWKNQLIHTANPHWQD ITIHIPV" gene complement(2133080..2134330) /locus_tag="SKA53_10674" CDS complement(2133080..2134330) /locus_tag="SKA53_10674" /note="COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /codon_start=1 /transl_table=11 /product="N-carbamoyl-L-amino acid amidohydrolase" /db_xref="CDD:10494" /translation="MPSPGENLKINGERLWDSLMEMAKIGPGVAGGNNRQTLTDEDSA GRHLFQRWCDAAGCTMGVDEMGNMFARRDGTDPDALPVYVGSHLDTQPTGGRYDGVLG VLGGLEVIRTLNDLDIKTKHPIVVTNWTNEEGTRYAPAMLASGVFAGKHALDWALDRV DAKGKRFGDELERIGWKGPEKVGDRKMHAFFELHIEQGPILEAEGKQIGVVTHGQGLR WVQCTVTGKESHTGSTPMHMRKNAGRGLALITELVHEIAMKHQPNAVGAIGHIDVYPN SRNIIPGKVVFTVDMRSHLLDKLNAMVTELMERAPQICADIGVEFEAEIVGQFDPPAF DETCVAAVRKAAERLGYSHMDIVSGAGHDACWINDIYPTAMIMCPCVDGLSHNEAEEI TPQWAAAGTDVLFHAVVETAEIVG" gene 2134493..2135095 /locus_tag="SKA53_10679" CDS 2134493..2135095 /locus_tag="SKA53_10679" /note="COG1309 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /db_xref="CDD:11025" /translation="MTKPPTRIQKRNQAAIMSAGLDIFSQFGFRGTTLDQIADAAGLS KPNLLYYFPSKEAIHTALLERLLENWLDPLKALNSGGDPVQEIIAYAHRKLALSKDYP RESRLFANEILQGAPRIENILHTDLKQLVDEKAAVIKGWADKGKIAPVDPYHLIFSIW ALTQHYADFDVQVQAVMPGSDPYAGAATYLDHVISRILQP" gene complement(2135096..2136400) /locus_tag="SKA53_10684" CDS complement(2135096..2136400) /locus_tag="SKA53_10684" /EC_number="1.3.1.1" /note="COG0167 Dihydroorotate dehydrogenase" /codon_start=1 /transl_table=11 /product="dihydropyrimidine dehydrogenase" /db_xref="CDD:10042" /translation="MADLTTNFLGIKSPNPFWLASAPPTDKEYNVRRAFDAGWGGVVW KTLGSEGPPVVNVNGPRYGAIYGADRRLLGLNNIELITDRPLQTNLDEIKRVKADYPD RAMIVSIMVPCEEQAWKDILPRVQETGADGIELNFGCPHGMSERGMGAAVGQVPEYIE MVTRWCKQYYDKPVIVKLTPNITDIRQPAAAAMRGGADAVSLINTINSITSVNLDTMS PEPSIDGKGSHGGYCGPAVKPIALSMVSEIARHPETRGLAISGIGGVTTWRDAAEYIS LGCGNVQVCTAVMTYGFKIVQEMISGLSGWMDEKGYTSVEQVVGRAIPNVTDWKYLNL NYVAKAKINQDDCIKCGRCYAACEDTSHQAIAMSADRTFTVIDAECVACNLCVDVCPV ENCITMEAMQPGQVDPRTGKVVQKEYANWTTHPNNPGAVAAE" gene complement(2136498..2137826) /locus_tag="SKA53_10689" CDS complement(2136498..2137826) /locus_tag="SKA53_10689" /note="COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases" /codon_start=1 /transl_table=11 /product="pyridine nucleotide-disulphide oxidoreductase family protein" /db_xref="CDD:10364" /translation="MSNPMTPGIAAARLPAETLAQNFADLHAPLDRHEARVAADRCYF CYDAPCVTACPTSIDIPLFIRQISTGTPDAAAKTIFDQNILGGMCARVCPTEDLCEQA CVREAAEGKPVEIGRLQRYATDTLMAKQSHPYSRAAPTGKTVAVVGAGPAGLACAHRL AMYGHDVTIFDAQTKPGGLNEFGIAAYKSTDDFAAREVDWLMGIGGITLQTGKALGRD LSLDALAGDFDAVFLAVGLGGVNALQAAGEDKDGVRNAVDFIAELRQASDLTSLPVGR DVVVIGGGMTAVDAAVQSKLLGAQNVTIAYRRSRDAMSASRYEQDLAASHGVRLMFNV QPVAIHGNGSVREVELEYTADTGAGLQGTGETIRLRVDQLFKAIGQTLETGAGLALDG RKIAVTAAGRTSRAGVWAGGDCASGGDDLTVTAVAEGRDAAMDIHAALTA" gene complement(2137976..2138884) /locus_tag="SKA53_10694" CDS complement(2137976..2138884) /locus_tag="SKA53_10694" /note="COG0673 Predicted dehydrogenases and related proteins" /codon_start=1 /transl_table=11 /product="D-galactose 1-dehydrogenase, hypothetical" /db_xref="CDD:10542" /translation="MRAICLVGIGKIAVDQHIPAIAASPDWMLAATVSRAGAVDGVPA YTDFARMLAERPDIDTVSLCLPPVPRYDYAAAAIAAGRHVMLEKPPGATLAEVQALAR MAQDAGVTLYTTWHSRMAKGVAPAKAWLADKIVTAAHITWKEDVRRWHPGQDWVFTPG GMGVFDPGSNALSIMTEILPQPVHLRHADLYFPANRDTPIAAELTWTGNVTGSFDWRQ TGPQSWDIVVQTDNGTLALHDGGARLVIDGKDVESGADREYPALYDRMAELVKTAASE VDITPMIHVADALTLGKRHVVDAFDF" gene complement(2138884..2140641) /locus_tag="SKA53_10699" CDS complement(2138884..2140641) /locus_tag="SKA53_10699" /note="COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase" /codon_start=1 /transl_table=11 /product="putative dihydroxy-acid dehydratase protein" /db_xref="CDD:25654" /translation="MTFIPATWPRKLRSQEWFGGSSKDAIYHRSWMKNQGLPADLLDG RPVIGICNTWSELTPCNAHLRDLAERVKFGIYEAGGFPVEFPVFSPSESTLRPTAMMY RNLCAMDVEEALRGKCIDGVVLLAGCDKTTPALLMGAASVDLPAIMVSGGPMLNGHFR GERVGSGTHLWKFSEAVRAGEMTEEEFVEAEASMSRSPGSCNTMGTASTMASMAEALG MALSGNAAIPAVDSRRRVMAHLTGRRIVQMVKDDLKPSDIMTKSAFENAIRTNAAIGG STNAVIHLLAMAGRTKDVTLTLDDWDRLGRDVPTIVNLMPSGKYLMEEFFYAGGLPVV IKRLGEAGLLYRDALTVSGGTIWDEVKDVRNWNEEVILPVDKALTASGGIAVLRGNLA PGGAVLKPSAATATLMQHRGRAVVFEDIDDYKARINDDDLDIDETCVMVLKNCGPRGY PGMAEVGNMGLPPKILKKGITDMVRISDARMSGTAFGTVVLHTSPEAAMGGPLAVVQN GDMIELDVAGRRLHLDITDAELQARLAAWSAETSGANPRPASGYAMLYHDRVMGADTG ADFDFLVGHRGNAVGKEAH" gene 2140889..2142853 /locus_tag="SKA53_10704" CDS 2140889..2142853 /locus_tag="SKA53_10704" /note="COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases" /codon_start=1 /transl_table=11 /product="acetyl-coenzyme A synthetase" /db_xref="CDD:10239" /translation="MTHAPSADDRFAPSAAFAAKAHVTADQYQAMYNASIQDPERFWA EHGKRIDWIKPFTKVKSTSFAPGKIDIKWFEDGTLNVSANCIDRHLETRGDQTAIIWE PDDPKDAAQHITYKELHRRTCRMANILETMGVRRGDRVVIYLPMIPEAAYAMLACARI GAVHSIVFAGFSPDALGTRINGCDAKVVITADHAPRGGRSTPLKSNTDAALLHCKDSV KCLVVRRTGGQTSWADGRDFDYNEMAMEADDYCAPAEMGAEDPLFILYTSGSTGQPKG VVHSSGGYLAYAAMTHQYTFDYHDGDIFWCTADVGWVTGHSYIVYGPLANGATTIMFE GVPTYPDAGRFWEVCQKHKVNQFYTAPTALRALMAHGNGPVEKYDLSSIKVLGTVGEP INPEAWNWYNDVIGKGKCPIVDTWWQTETGGHLLTPLPGAIATKPGSATLPFFGVLPV ILDPQTGVEITTTAAEGVLCIKDSWPGQMRTVYGDHERFEKTYFSDYKNYYFTGDGCR RDEDGYYWITGRVDDVINVSGHRMGTAEVESALVAHADVAEAAVVGYPHAIKGQGIYA YVTLMNGVEPSEDLRKDLVKWVRSEIGPIASPDLIQWAPGLPKTRSGKIMRRILRKIA ENDHTTLGDISTLADPSVVDHLIEHRMNKV" gene 2142850..2143536 /locus_tag="SKA53_10709" CDS 2142850..2143536 /locus_tag="SKA53_10709" /note="COG0563 Adenylate kinase and related kinases" /codon_start=1 /transl_table=11 /product="adenylate kinase" /db_xref="CDD:22990" /translation="MSGAETITRPAVLILLGPPGAGKGTQARMLQDRFGLVQLSTGDL LRAAVAAGTEAGLAARSVMAAGGLVSDDIVLAILKDRLAAADTQKGVILDGFPRTTVQ AEALDTLLAQSGQRINAAISLDVDDTEMVTRIAGRYTCGGCGEGYHDSFKTPAVAGVC DKCSGTDMQRRPDDNTATVGQRLAAYHAQTAPLITYYENKGTLQRINAMGAIGQIAEE LGTIVKQAVV" gene 2143605..2143865 /locus_tag="SKA53_10714" CDS 2143605..2143865 /locus_tag="SKA53_10714" /note="COG4327 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13574" /translation="MAEEPQNNNAYWAANVRIILISLTIWASVSFGFGIILRPALMGI SVGGADLGFWFAQQGSILTFLGLIFFYAWRMNKLDAEHGVEE" gene 2143888..2145705 /locus_tag="SKA53_10719" CDS 2143888..2145705 /locus_tag="SKA53_10719" /note="COG4147 Predicted symporter" /codon_start=1 /transl_table=11 /product="Na+/solute symporter" /db_xref="CDD:13424" /translation="MDQYTLNLLVVGATFALYIGIAIWARAGSTAEFYAAGQGVPPVM NGMATAADWMSAASFISMAGIIALAPAGGYTQSSFLMGWTGGYVLLALLLAPYLRKFG KFTVPEFVGDRFYSNGARVVAVICLIVISVTYVIGQMRGVGVTFARFLEVSTDTGLYI GAAIVFAYAVFGGMKGITYTQVAQYCVLIVAYTIPAIFISLQITGNFLPQLGLLGGYA PTGGDVAFLAKLDQVVTELGFTQYTSHTTSTLNMVFFTMSLMIGTAGLPHVIIRFFTV PKVSDARWSAGWALVFIALLYTVAPAVGSMARLNISTTFWPNAVEGNALDGEALSLEQ INTNPELAWINTWKNTGLLNFEDKNGDGFIQYYNENNAGMQAIAAERGWTGNELTKID NDMMVLANPEIAKLPGWVIALVAAGGLAAALSTAAGLLLAISSAISHDLIKGSINPNI SEKGELLAARISMGFAILLATWLGLNPPGFAAQVVALAFGLAAATIFPVLMMGIFSKR VNKEGAIAGMLVGLIATAIYIFLFLGWFFIPGTAMLANTPDNWLFGISPASFGTVGAM LNFGTAYIVSGLTKAPPREVQDLVESIRVPKGAGAATGH" gene 2145795..2147630 /locus_tag="SKA53_10724" CDS 2145795..2147630 /locus_tag="SKA53_10724" /note="COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains" /codon_start=1 /transl_table=11 /product="nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein" /db_xref="CDD:12254" /translation="MPRSMLDLRRFLLSIHPYDSLPDVDFQNVLTQFIRVPMAPGDVI YAFGTPCEGLYIILDGEVEITTENGEIVSHLGSRNSFGERGLMRDGTTGTHARALSDG ELLLLPTDDFHALIAANAGAHRFFTRGRTRNDADATRPATLTETRVDQLMAADPVTCS ADDTITAIAKLMRQYRISCLPVMAGTRLAGIVTLHDINNRVVAEGLDTGLPVSRIMTA NPETLPPSAIGSDVLHMMMERRFGHVPIVDQCRLVGIVTQTNLTRFQATNSASLVHDV VRATTADDMAGVSARIPQLLVQLVGAGNRHETVTRLITDIADAITRRLLTLAEENLGP PPVPYLWLACGSQGRQEQTGISDQDNCLMLDDSVTDADMPYFADLAKFVSDGLSKAGY FYCPGDMMATNPRWCQPVRVWRRYFRRWIDTPNTEAQMLASVMLDLRPIGGTRSLFAD LHRETLAQAARNSIFVAHMVSNSLKHTPPLGLLRGFTTLRSGEHKHHIDMKMNGVIPI VDLGRIYALRGQLDSVNTRARIASAHGAGQISQSGGHDLLDAYDLIAQARLDHQAMLI RAGAKPDNFMSPNVLSEFERSHLRDAFVVVRTMQSAVTQGLGIIG" gene 2147657..2148181 /locus_tag="SKA53_10729" CDS 2147657..2148181 /locus_tag="SKA53_10729" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MYVDIITIVAAGFAAAGVALILNRLSGRRLPRWVVPAFAGTGMI VMSLTNEYRWYPRTLTLLPAGFEVISTADYSAPFSPWTYVIPYVNRFAAVDVAGVQRN ANAPDMRLANVVFFQRWQPMQLRSALFDCAQGRTALLQDNAMFNEDGTVRVPRWDQTG LDDPATALVCAGPI" gene 2148181..2149590 /locus_tag="SKA53_10734" CDS 2148181..2149590 /locus_tag="SKA53_10734" /note="COG2176 DNA polymerase III, alpha subunit (gram-positive type)" /codon_start=1 /transl_table=11 /product="exonuclease, DNA polymerase III, epsilon subunit family" /db_xref="CDD:11884" /translation="MLGRLRPRQRTLAFFALLAFGSIGLLAAALLLAEARLDQPEARQ AFITAGIIGGFGIFGFVAVMWLVFDDMVVHPMERLAAAMQAHAATDMHRGIDAETARH LGDLAKGAAALTSRLASARAEADANLARYTSKLATEREHLTRILSAIPAAVLMVSPDH RIALYDGHAALMLDDQHHLGLRQKIFDYFDETYLRAALTNLARSGQATLDQQIATADG ARLLDVSLHNLGRDQGYMLSFPVPREASPARPVVFDFAMTTRTETRDIQDVPLRDLTY VVFDTETTGFLPNKDEVVQIGALRVVNGQQAPGEVLDLLVNPGRAIPASSTAVHRITD AMVKDAPDMVHAGRKFHSFARDAVLVAHNAPFDLSFFHRYAPKIGMKFDHPVLDTVLL SAVLFGITEGHTLDELAKRLGIELLDKHRHTAIGDAIATRDIFLRMIPMLEARGLTTF GAVVAEIRKHKRLLPDMNT" gene 2149700..2150560 /locus_tag="SKA53_10739" CDS 2149700..2150560 /locus_tag="SKA53_10739" /note="COG0451 Nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10325" /translation="MTQTLLSFGHGFSADALARILLPQGWRIIGTTRSEDKAARLHQA GIEPRIWPGADMRPALDAATHLLVSAAPDDNGDPVLAQLQAEITARAGQFAWVGYLST TGVYGDHAGDWVDETTPLAPATKRGIARVQAEAAWATIPDLALHIFRLAGIYGPGRGP FAKVRDGSARRIIKPGQVFSRTHVADIAQVLAASIARPNPGAIYNVCDDDPAPPEDVI GYAAELLGLPLPPAQDFATAEMTPMARSFYAESKKVRNDRIKDELGVRLIYPDYRRGL QALLVQEDGT" gene 2150767..2151543 /locus_tag="SKA53_10744" CDS 2150767..2151543 /locus_tag="SKA53_10744" /codon_start=1 /transl_table=11 /product="voltage-gated sodium channel" /db_xref="CDD:25532" /translation="MNLRARTSAFLDRPAVGQFIFGVIVFNAIILGLETSDNVMARAG GLILLLDQICLAIFVAELAVKLFAYGPRFFRSGWNIFDFIIVGISLVPGNGALSVLRA LRILRVLRVISVVPSLRRVVEGFVTALPGMGSVFLLMGIVFYIGAVMATKLFGDSFPE WFGTLGASGYSLFQIMTLESWSMGIVRPVMEVYPYAWAFFIPFIMMTTFAVVNLLVGL IVNSMQDAHAEEGNAATDAYRDEVLAKLAAIEQRLDQAGK" gene complement(2151645..2153057) /locus_tag="SKA53_10749" CDS complement(2151645..2153057) /locus_tag="SKA53_10749" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="putative chemotaxis protein" /db_xref="CDD:24241" /translation="MKDLQQDMPEQDKSDALMADLARRLGDLSIDIARVSGHVDDTSQ QVGQQSRTGIELAQRVDHISSRAQAVLTSAEEAQAISAKAEENAQESGSKLQSMVADV AALIDMVTHIAGQFGRLQNTLTSVARVSGEIGEISRQTNLLSLNAAIEAARAGAHGRG FMVLAREVKDLSQTTREATEEIASTITTLDRELAGLRGETARALDSASVIRTQIDDVS TLVENMPRVMGTVIAAQRDIVGASTSIATEIVQMKSGIDELSEGIAASDQSLANAREK MRDLTNSSETLTAMTALIGLETIDTPYITAAQDLAQRISARFEQAVQGGEVALADLFD RDYRPVPGSNPAQVILRCVRFTDRVLPALQEPLLTLSDRVVFCAAVNADGYLPTHNVK FSQPQRPDDPDWNAAHCRNRRIFNDRVGLAAGRSTRPFLLQAYRRDMGNGTFAMMKDV SAPIMVNGRHWGGVRLAYLV" gene complement(2153128..2155041) /locus_tag="SKA53_10754" CDS complement(2153128..2155041) /locus_tag="SKA53_10754" /EC_number="2.2.1.7" /note="COG1154 Deoxyxylulose-5-phosphate synthase" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose-5-phosphate synthase" /db_xref="CDD:10873" /translation="MSDQPNTPLLDKVQTPADMKSLSDAQLRKLADELRAETIAAVSV TGGHLGAGLGVVEMTVALHAVFDAPKDKIIWDVSHQSYPHKILTGRRDRIRTIRTEGG LSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGDPGDAIAIIGDGAISAGMAY EAMNNAGHLGKRLIVILNDNEMSIAPPVGAMSSYLSQLYAGAPFQEFKAAAKGAVSLL PEPFREGAKRAKDVLKHMTVGGTLFEQLGFSYVGPIDGHDMDQLLSVLRTVKARADGP ILIHAITKKGKGYAPAESASDKGHATAKFDLVTGKQAKAPSNAPSYTSVFAESLLKHA AADPRICAVTAAMPDGTGLSKFMERYASRCFDVGIAEQHAVTFSAGLAAGGMRPFCAI YSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANLPGFVVM AAADEAELVRMVATAAAYDEGPIAFRFPRGEGVGVEIPQDATPLEIGKGRMIREGAQV AILSFGTRLSEVMKACETLEAKGIKPTVADARFAKPLDRDLILQLAAGHDALITVEEG AVGGFGSHVGQLLADEGVFDHGLRFRSMVLPDTFIDQASPKAMYDVAGMNAAHIEAKV LEALGIARLGKRA" gene complement(2155053..2155937) /locus_tag="SKA53_10759" CDS complement(2155053..2155937) /locus_tag="SKA53_10759" /note="COG0142 Geranylgeranyl pyrophosphate synthase" /codon_start=1 /transl_table=11 /product="geranylgeranyl pyrophosphate synthetase" /db_xref="CDD:10017" /translation="MVDLITRRPLPDALAQAARIATQMIEAQLSDLSGPVPDAMIYAA RGGKALRAFLAIETARLHGVPPQVAAHAAAAIECIHAYSLIHDDLPCMDDDDLRRGQP TVHKRWDEATAVLAGDALQALAFELLGRLDCADAAKLDLTLSLAQAAGVRGMVGGQAA DIAAETADVPLTLDQIIALQAGKTGALMSWAALVGPRMALADQAALRLYGDCLGLAFQ IADDVLDVTGDAALVGKALGKDAAAGKATFVSLLGLDGAKRRAVDLVTQACDALSDYG DDAETLKDAARFVTARTH" gene complement(2155930..2156163) /locus_tag="SKA53_10764" CDS complement(2155930..2156163) /locus_tag="SKA53_10764" /note="COG1722 Exonuclease VII small subunit" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease VII, small subunit" /db_xref="CDD:11433" /translation="MTEVDQMSFEDAIKELETVVGQLERGDVALDQSIALYERGAALK ARCEAKLKEAEEKVARITLGENGHPTGTAPLDG" gene complement(2156160..2157083) /locus_tag="SKA53_10769" CDS complement(2156160..2157083) /locus_tag="SKA53_10769" /note="COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein" /codon_start=1 /transl_table=11 /product="histone deacetylase family protein" /db_xref="CDD:24480" /translation="MTTALIFHDDCHGHVTPPGHPEQVARLDAVLGALAGMEMMRVKA PLAAQDDLLRAHPQAHLDALHAAAPETGWHALDADTHMSRGTLAAAYRAAGAVVLAVD LVMAGDVANAFAAVRPPGHHAERETPMGFCFFGNVAVGAKHALDHHGLARVAIVDFDV HHGNGTQDLVEDDPRILFCSTHQSPLYPGTGAADETGVGNVLNVPLPAGTGSRTFRDV MDRVVLPRVDAFAPELILISAGFDAHRDDPLAGLELTEDDFAWVTARLCDLADSHCHG RVVSALEGGYDLPALGASAAAHVRILEERGR" gene complement(2157167..2157868) /locus_tag="SKA53_10774" CDS complement(2157167..2157868) /locus_tag="SKA53_10774" /note="COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator PetR" /db_xref="CDD:10613" /translation="MSADDAHLLIVDDDARIRSLLQKFLMRAGFLVTTARDAAHARRV LAGLEFDLIVLDVMMSGEGGVALCRDLRRTITTPIMLLTAKGETMDRITGLEAGADDY LVKPFEPKELLLRINAILRRVPAAEPVAILPKVLHMGPVRYDIERGEMWHGTNLVRLT ATESQLMRIFSGRPGEPVTRTKLVEELSRSGGQTQERAVDVQITRLRRKIEIDPKQPR FLQTVRGEGYMLAPE" gene complement(2157865..2158371) /locus_tag="SKA53_10779" CDS complement(2157865..2158371) /locus_tag="SKA53_10779" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /db_xref="CDD:24258" /translation="MAEGARPQMGQNLLFLTDEQLRKGIEAMFFAYRGFTADPDRILA QKSYGRAHHRALHFIHRSPGTTVNNLLSILGVTKQSLNRVLRSLIEDGLVISSVGNKD KRERHLHLTPAGAVLERALSDAQRDRMRAAYRAAGPAAVVGFRQVLEAMMDPEARQHY EAMKDKPE" gene 2158515..2159384 /locus_tag="SKA53_10784" CDS 2158515..2159384 /locus_tag="SKA53_10784" /EC_number="2.6.1.42" /note="COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase" /codon_start=1 /transl_table=11 /product="branched-chain amino acid aminotransferase" /db_xref="CDD:9990" /translation="MAGAYDDRDGKIWLDGKLVEWRDANVHILTHAMHYASSVFEGER CYNGKIFKSRAHSERLIKSGQLIDFQIPFSVDEIETAKQAALDANGLKDAYVRPIAWR GSGEDMGVAAARNPVHLAVAVWEWGNYYGDAKTRGAKLDIAKWKRPSPETAPSQAKAA GLYMIATMSKHAAEAKGCSDAMMFDYRGYVAEATGANLFFVKDGEVHTPAADAFLNGI TRQTVIGMLRDKGITVHERVIMPDELEGFQQCWLTGTAAEVTPVGQIGDYNFEVGALT RDIAADYEKLVRA" gene complement(2159427..2159624) /locus_tag="SKA53_10789" CDS complement(2159427..2159624) /locus_tag="SKA53_10789" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKHPLDRAKSGSNDELQRVIGLKKDALPRRTTLDLQKRPRSHVT ERRTTEFVRIAREEETAIWQR" gene complement(2159700..2160620) /locus_tag="SKA53_10794" CDS complement(2159700..2160620) /locus_tag="SKA53_10794" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="Putative transporter, RarD family, DMT superfamily" /translation="MQPLKGIVFKVVSVCMFMAMAGLIKAASETVPPGQAVFFRSFFA LPIIFGWLALRGELRHGWKTTNTVGHFWRGLVGTSAMGLGFAGLGLLPLPEVTAIGYA APLLVVIFAAMFLNEDVRAFRLSAVALGMIGVLVVLSPRLSVGASLNTAETLGAVVVL MGAVLTALAQVFVRKLVATETTSAIVLWFTVTSSLLALLTIPWGWVTPTWPIAALLVM AGLLGGVGQIFLTSSYRFADASLVAPFDYTSMILALAIGYFIFDEVPTGTMLIGAGIV ILAGVLIIWRERKLGLQRAQQRKATGNMGS" gene 2160766..2161761 /locus_tag="SKA53_10799" CDS 2160766..2161761 /locus_tag="SKA53_10799" /note="COG3239 Fatty acid desaturase" /codon_start=1 /transl_table=11 /product="putative fatty acid desaturase" /db_xref="CDD:12576" /translation="MTARDWVHVLAQYREPNNWRSSFELAVSLIPFILLWVLAVWVSQ FSYIGALLISALNGLFLLRLFCIQHDCGHGSFFGNRKVSDWIGRALGVVTLTPYDVWR RTHSIHHSHAGDLDQRGIGDVMTLTVEEYHQRTPFGRFLYRAYRHPLVMFGLGPTYIF FLQNRMPHGRMQRESKYWVSAMGTNLAVAVLLTVIGYVGGFAALFLVFLPTTLIAASI GVWLFYVQHQFETTHWDAADDWQLHDAALHGSSHYDLPPILRWFTANIGIHHVHHLYS RIPFYRLTEVLRDHQDLVECSRMTLLQSLKCASLDLWDEKSRRLVSFAAARRAAA" gene complement(2161803..2162834) /locus_tag="SKA53_10804" CDS complement(2161803..2162834) /locus_tag="SKA53_10804" /note="COG1600 Uncharacterized Fe-S protein" /codon_start=1 /transl_table=11 /product="4Fe-4S ferredoxin, iron-sulfur cluster binding protein" /db_xref="CDD:11313" /translation="MKDRLKDFALEAGFAKIGICRPDAVPEMAERLATFVADGRHGQM AWMADRMQWRGDPTALWPAARSVIMLAEVYTPDHDPLAVLDERDRAAISVYAQGRDYH DVVKKRLKVVGRWLIDQVPEAEIKVFVDTAPVMEKPLAQAAGLGWQGKHTNLLGRDLG NWVFLGAIFTTVVLEPDTPEISHCGSCTACLDICPTQAFPAPYQLDARRCISYLTIEH KGPVDPDLRGLMGNRIYGCDDCLAVCPWNKFAASGRDARLAARDDLLAPPLAELAQLD DAAFRARFAGSPIKRIGRDRFVRNVAYALGNSGDPAMAAHLSHLVDDPDATVADAARW AVLRLQRAG" gene complement(2162901..2163659) /locus_tag="SKA53_10809" CDS complement(2162901..2163659) /locus_tag="SKA53_10809" /note="COG0625 Glutathione S-transferase" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /db_xref="CDD:10495" /translation="MAARSALNDEAGIEPRDLLRHGSSIVQVRFAMNTLYHYPLSPFS RKVRLCLAEKKIEVGLVEERYWEQSPEFLRRNPAAKVPVLKMNGRLMSESTAICEYLE EVYPTPPLMPRDAEGRYEVRRLVGWFDDKFYHEVTFKLTGERVYRKVMARGYPDSANV KAGARAIKFHLDYMAHLLEHRRWLAGNDMTLADFAGAAHLSCLDYTSDVDWNRHEVVK DWYAKIKSRPAFRSLLADEVPGFQPAAHYADLDF" gene complement(2163631..2164383) /locus_tag="SKA53_10814" CDS complement(2163631..2164383) /locus_tag="SKA53_10814" /note="COG0744 Membrane carboxypeptidase (penicillin-binding protein)" /codon_start=1 /transl_table=11 /product="monofunctional biosynthetic peptidoglycan transglycosylase" /db_xref="CDD:25650" /translation="MAETPKPPKRRARKSTRDTAAKKPGLRHRVLRAARRALVWGGAG IAGFVLVWTLLYALINPPTNAYMLSEGRRLGGVQQDWVPMGGIAPVMARSAVAAEDAN FCLHWGLDVNAIRDAMENGRGGASTISQQVVKNLFLWHGRSWARKSVEAVWTPVIEVL WSKRRILEIYLNVAEFDTGVFGVQAAARHYFGVDAGDLTATQAARLAAILPAPKERSA SNPSGFTRNRAAQIMQGADTIAADGRAECFER" gene complement(2164465..2169000) /locus_tag="SKA53_10819" CDS complement(2164465..2169000) /locus_tag="SKA53_10819" /note="COG0067 Glutamate synthase domain 1" /codon_start=1 /transl_table=11 /product="Glutamine-pyruvate aminotransferase" /db_xref="CDD:9944" /translation="MMTTYDQTWVAAEEAKRKWMAENGMYRDDDEHASCGVGLVVAID GTPSRDVVEKGINALKAIWHRGAVDADGKTGDGAGIHLQIPVPFFYDQVRRTGHEPDD DKMIAVGQVFLPRTDFGAQERCRTIVESEVLRMGHYIYGWRHVPVNTEVLGEKANATR PEIEQILIRCEKDMTEEEFERELYIIRRRIEKAAAAAQIAGIYLCSLSCRSVIYKGMM LAEQVAEFYPDLMDARFESAFAIYHQRYSTNTFPQWSLAQPFRMLAHNGEINTLKGNV NWMKSHEIRMASGAFGDKAEDIKPIIPSGASDSAALDSVFEVLVRAGRNAPMAKTMLV PEAWSQQAVEMPQAWQDMYGYCNAVMEPWDGPAALAMTDGRWVCGGLDRNGLRPLRYV VTGDGLLVAGSEMGMVPVDEATVIEKGALGPGQMIAVDMLEGRLYRDRELKDKLAAAQ PFSDWVEKVVDLNNLMRDMPEKALFDGAELRKRQVAAGYSIEELEQVLAPMAEDGKEM IASMGDDTPSAVLSTTYRPLSHFFRQNFSQVTNPPIDSLRESRVMSLKTRFGNLKNVL DEDSSQTEILVLDSPFIANAEFDEMVRQFGDSVAFIDCTFAAGRGALNAGLQRIRAEA EDAVRSGAGHLVLTDQHQSADRVAMPMILATSAVHSGLTGKGLRTFCSVNVRSAECID PHYFAVLIGCGATTVNAYLAQDSIADRLRRGLIDGTLTEAVRRYRAAVDAGLLKIMSK MGISVLSSYRGGLNFEAVGLSRAMVAEYFPGMHSRISGIGTTGIQAKAEEVHAKGWKG GSDVLPIGGFYKARRSGEKHAWEAQTMHMLQAACNNASYALWQQYSKSMQANPPIHLR DLLAIKPLGAPVPIEEVESITAIRKRFVTPGMSLGALSPEAHKTLNVAMNRIGAKSDS GEGGEDPAHFVPEPNGDNPSAKIKQVASGRFGVTAEYLNACEELEIKVAQGAKPGEGG QLPGMKVTELIARLRHSTKGVTLISPPPHHDIYSIEDLAQLIYDLKQINPRAKVTVKL VASSGVGTIAAGVAKAKADVILISGHNGGTGASPGTSIKYAGLPWEMGLTEAHQVLAM NNLRERITLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQCQSNTCPVG VCTQDDALRAKFTGNAEKVVNLITFYATEVREILASIGARSLDDVIGRADLLTQVSRG SAHLDDLDLNPLLITVDGAHKIRYDRHRPRTAVDDTLDAQIVQDAARFLNDGEKMQLD YAVQNTLRSIGTRTSSHIVQKFGMRNALQPDHLTVKLRGSAGQSLGAFAAPGLKLEVS GDANDYVGKGLSGGTIVVRPPMISPLVASENTIIGNTVLYGATAGYLFAAGRAGERFA VRNSGAHVVIEGCGTNGCEYMTGGVAVILGSIGANFGAGMTGGMAYLYDPKGMSAPLI NMESLVTCPVTVAHWHDQLKDLIIRHAKETGSRKAADILQHWDLEKANFVQVCPKEML INLKHPLTIAQTAIPAE" gene complement(2169062..2169733) /locus_tag="SKA53_10824" CDS complement(2169062..2169733) /locus_tag="SKA53_10824" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKLLSALIVFMVAAPVAAQQSFAPPQGCTGKLTVQHRNCVMVN VWTCDADPAGDQWLALIGQNGVFSVQRVDDQFQWLESYKTTGTEMLQLPAPDPASLTE LFAAQIDTWDFTVDTDAGIERHVGFDMLTGETIVIDGETLLVTEFQGRTTDADGNEIY AGSGRQYVSETHRLFFLGEGWEDVTPDQVTDSSPVEFIYPGEAGFFTDQPRYECNVIE SGFRP" gene complement(2169733..2171160) /locus_tag="SKA53_10829" CDS complement(2169733..2171160) /locus_tag="SKA53_10829" /note="COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases" /codon_start=1 /transl_table=11 /product="Glutamate synthase (beta subunit)" /db_xref="CDD:10364" /translation="MAGQKMLKFTTVHRDMPEKRLPDLRKQDFNEIYAEYARDKAAEQ ASRCSQCGVPYCQTHCPLHNNIPDWLRLTAEGRLQEAYEISQATNTFPEICGRICPQD RLCEGNCVIEQSGHGTVTIGSVEKYITDMAFENGWVQPIRPHAERAESVGIIGAGPGG LAAADMLRRQGVQVTVYDRYDRGGGLMTYGIPGFKLEKDIVMQRMAQLEDGGVQFVLN CNVGEDLSFDAIRGKHDAVLIATGVYKTRDLPDSSAEGIVNALDYLTASNRKSFGDEV PEYDSGALNAAGKRVVVIGGGDTAMDCVRTAIRQGAESVKCLYRRDRANMPGSQREVA NAEEEGVEFVWLSAPLGFEGDAVSGVKVQKMRLGAPDATGRQMPEVIAGADYIEEADL VVKALGFEPEDVPTLWGVPELAVTRWGTIKADFTTGKTSLDGVYAAGDIVRGASLVVW AIRDGRDAATAILDYLGQSASVAAE" gene 2171376..2172179 /locus_tag="SKA53_10834" CDS 2171376..2172179 /locus_tag="SKA53_10834" /note="COG1968 Uncharacterized bacitracin resistance protein" /codon_start=1 /transl_table=11 /product="undecaprenol kinase, putative" /db_xref="CDD:25938" /translation="MTMFHLLLVALIQGVTEFLPVSSSGHLILLPSLTGMADQGLIID VAAHLGTLTAVIVYFWPDVRLALSGALRLLRGKIDTQGAFLALCLLIATIPVIIAGLI LKVTGLADAMRGIAVIGWAMLLFGIVLYIADQKGETVKTAERWTMKDAAVMGLWQAVA LIPGTSRSGITITAARMLGYARPDAARLSMLMSIPTIIASGALLSLDVIGTATAADLR DIAIVAVMSGVAAWAALAIMMRLLRSVSYTPYVIYRIGLGIVLLMIAYS" gene complement(2172176..2173156) /locus_tag="SKA53_10839" CDS complement(2172176..2173156) /locus_tag="SKA53_10839" /note="COG0702 Predicted nucleoside-diphosphate-sugar epimerases" /codon_start=1 /transl_table=11 /product="NADH ubiquinone oxidoreductase, putative" /db_xref="CDD:10571" /translation="MSKLVTIFGGSGFVGRYIARRMAQNGWRVRVAVRNTNEAMFVRT YGAVGQVEPVFCNIRDDASVAAVTHGADAVVNCVGVLAELRKNTFAAVQAEGATRIAR IAAEMGVARMVQISAIGASDTSVSAYARTKAAGEQGVLDHMPDAMILRPSIIFGAEDQ FFNRFAGMTRLGPVLPVIGADTQFQPVYVDDVAAAAVKGVLGEVPGGIYELGGPDVAT FRELMQTMLAVVRRRRMILNMPFWAARIMAGAFNILRIVSLGLVTPPVTRDQVENLAL DNVVSDGAKGFADLGIVPTAMMAVLPDYLWRFRPSGQYDAIKESAKNLRS" gene 2173307..2173390 /locus_tag="SKA53_t11087" tRNA 2173307..2173390 /locus_tag="SKA53_t11087" /product="tRNA-Leu" gene 2173541..2174635 /locus_tag="SKA53_10844" CDS 2173541..2174635 /locus_tag="SKA53_10844" /codon_start=1 /transl_table=11 /product="site-specific recombinase, phage integrase family" /translation="MILRLRLLSMDQKMPLKLPRYVFRRANGSYRYKRNVPKALREVI PKATVYRQLGESYDEAIRRLPVVHAEIEALFDQERNTPSSVRAKSLVREHLGAWHADV FAEGVVEPEWDITDDFRELAAELEGSTPADVVRQVGSARLKPEPMTLHRVLTEYCAYK CDGSVEHTDLKTRIERIRKDLVIVLGKNRVEWTPLADINRADANTFRDYLLNRMAPNS VLRTLGVIKAAMNHVIIENDLEQRNVFQGIKIKGAGASKDDRLPMSDAQLEALLQSIK ATPSLCPAYHPRRQRRPPCRNRRARGKRHRPRGWLPAHPPQHAPPPEDQNVRTHDPAV PQSHSVPQAPASAGPRHRPHLPTICPTKGE" gene 2174649..2174864 /locus_tag="SKA53_10849" CDS 2174649..2174864 /locus_tag="SKA53_10849" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27725" /translation="MLMKRLRTQISDPKVTIHSLRHRMKDKLRNTGCPEAISLAILGH STNTVAANYGSGYALEVMREQMERVWG" gene 2174864..2176174 /locus_tag="SKA53_10854" CDS 2174864..2176174 /locus_tag="SKA53_10854" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQRHEDILSPEKARAFNPFLCAISDKLKALIVEVQKQVSGYEAY YKTRERVRRPADQITFERTIEAILCDLCAVTLEPQHNSLHLPLSNKILRAKSRYKGIA LGKTLPDILNILSAPEMDFVVVEKGHSNFKIVDEDLNMAFAGGRQTILRAGQKLLSRI ERFEITKDDLGHASEEEVLVLRAPKRHAASIAEYEEYEDNQATLGLRRQMTGINAWLG AADISCSYPDANAAQRRLRRIFNNSDFAQGGRLYGGFWQSMSSDERQEHISINQDAVV ECDYGQMNILLLYAVAAAQDHLPPGDLYDLSEYGIPVSCRPGIKKVMQTVINSTVLPR RLPKRSRKHFPPRISLGDILAAIQEKHPMIFPLMTSGIGMQLFRTEADILVDVLEALR SKGIVALPVHDAVIVADEDKDTTRTIMKAVFKDHTGITPQVTLG" gene complement(2176315..2176488) /locus_tag="SKA53_10859" CDS complement(2176315..2176488) /locus_tag="SKA53_10859" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSYVDALDLELEIMIVLMSLFRSFEGLCGVAVVSLLIVLALKLD IYRVVHGASMIVV" gene 2176688..2176828 /locus_tag="SKA53_10864" CDS 2176688..2176828 /locus_tag="SKA53_10864" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKGDPHKVSIIFLSKTVSVASINSDLRFNIQETMLTKCYVSYPL GT" gene 2176825..2178189 /locus_tag="SKA53_10869" CDS 2176825..2178189 /locus_tag="SKA53_10869" /note="COG3378 Predicted ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:23443" /translation="MKKNNAYYDVENLQVKYQPHDIKQVIVQRMVETFPLWQLSDQGW RDFFKILLDPPVNKLNPERSIAVWSGKQVFIPQNDQKVIFEKGTATINTWSRPIYRKT VGVEASAFNDFIEYVIPNDAERDVFLDWLVWVLRYEAQKPAWAIMLYSEKQGTGKSTL AEVLIELFGRLNTGRVNGVNKLIGRFNKEVLENKLVIVEEVEVKRGSPQANAIKSLVT EDSIMVEAKLMPVYVQQIHCAFLMTTNHLPLWLEESDRRFFILNFDHHGYANGGKDYN RFTKLVGAVKLQIKKPEGVKGIYDQLMRRDVPQDFGLKVDITKHRTDIMERLQDLAPD AAKQVLEETLKDKNIVFVPMKLAHQLINKITPREINAQTHIFSELGWRKGKFAWDGGP QNRAWYLVLDEDKLPNRGKVYTRNMTSPKCDFGWSTMASQVDAVRTILRLEEKNKSEE FLRV" gene 2178538..2178702 /locus_tag="SKA53_10874" CDS 2178538..2178702 /locus_tag="SKA53_10874" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQLWSMSTMLFATNATIEHVYDQIIYSWAHRRRMFWTKIGVNML GIHLRDAAKP" gene 2178936..2179172 /locus_tag="SKA53_10879" CDS 2178936..2179172 /locus_tag="SKA53_10879" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFTTFTALALAGGGLRLVLQWQLKRRWQIALSVPQALAGALVVL AGLPEFLKPIPFPIPLGLTLGLLLPDLVLTRRGL" gene 2179169..2179363 /locus_tag="SKA53_10884" CDS 2179169..2179363 /locus_tag="SKA53_10884" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDWQLKEDDVVVLRPLDDIPEHLFRVLDVYDDCITGYSLTGPL EGIYGEPGLELILRVHSRST" gene 2179464..2180708 /locus_tag="SKA53_10889" CDS 2179464..2180708 /locus_tag="SKA53_10889" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="putative integrase" /db_xref="CDD:27725" /translation="MSTQIKYAYRRHNTWIYRRTYPVQLHDILGSSLKRSLHTADAKV AAKRVAELNTTFEAIVLEAQAKLADGVQSGEPPQLAIAVPRYQRARLLGEQPVQEVAA VYLAEVSVRLRPGSYKSVRFALELLTSHVGARKLGDLNDTLGKEVLGYIARLSPNIRK YSQAQGASLAELATLSEEHEGISLTAQTQRRIWRQLQQFLDWCVRSGTLEANPWDGLA VKERPEVRSHRVLTDAQVSLLLNTNDRVLHSALLFCLLTGMRSGEACGLLAEDVSTKG NLGRFVQIRPNAVRLLKSKAAEREVPLHPVLETLLDTTLPTSGRLFPNLSVDKVVKRY AYLRRQHPELGSTVFHSTRKWFITQCERTGVPEHFTATLVGHQSARSENKLTYGLYSA GISDTQKREIIDQIRLPQDVLL" gene 2180705..2180887 /locus_tag="SKA53_10894" CDS 2180705..2180887 /locus_tag="SKA53_10894" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSALRIPDIEAFEERAAIAEYDGGLTRLQAESLAATQQGFASAG AYWRWLADYVVNRGLG" gene 2181109..2181939 /locus_tag="SKA53_10899" CDS 2181109..2181939 /locus_tag="SKA53_10899" /codon_start=1 /transl_table=11 /product="ISSpo9, transposase" /db_xref="CDD:25792" /translation="MSWEAEASGRRGRQKTYSDAAIQACLTLKVLFGLPLRQTTGFVE SLLKRVELDWSVPDFSTLCRRQKTLSVAIPYKGSAGPLHLLVDSTGIKAEGEGEWNAR KHGGPKRRLWRKIHIGVDEETLEIRAIEVTSSSIGDAPMLPDLLSQIPPDQELGSVTA DGAYDTRKCHDAIAARNAHAVIPPRKNAKMWKPDTAGAKARNEAVRSSKYLGRALWRN LTGYHRRSRVETKMHCVKLLGQRLSARDFDRQVAEIQIRAAILNGFTAIGIPRTVAVG " gene 2182017..2182142 /locus_tag="SKA53_10904" CDS 2182017..2182142 /locus_tag="SKA53_10904" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:17462" /translation="MTPFLLQRIFELSGGQSLKANIALVENNAWLAAEIAAAFHT" gene complement(2182219..2183301) /locus_tag="SKA53_10909" CDS complement(2182219..2183301) /locus_tag="SKA53_10909" /note="COG0477 Permeases of the major facilitator superfamily" /codon_start=1 /transl_table=11 /product="major facilitator family transporter" /db_xref="CDD:12168" /translation="MLPRLFDSFGADEKVVGSMLFATTISTIVTVYFSGHLSDYFGRQ RTLSGACIAISVSLFLYGFVDVVGISLVVASLLLGFGWGLTYSLGPVVLSRLVNADMR VRFFTLLSVFVMAGFGLSPVLAAVLEGAGFSVRHAFFVTAALCIVSAILFLFLDRPIK AHAINPRAELPSRITRAALSGVIASRSFLPIMMICLGASVFAGMINFQTVFADARGLN YASFFLIYTITVVVFRLILSRFKGGTNPYRTIAVLLYVMSISVVIFIFSGASFPLYML VAVLFAVGYGISYPLLVTVTANDADEHLSAQTLQLFALTYFIGIFGFPLIAGWFIVEL GTWPLLAFVAALALIEATLALRRSLN" gene complement(2183607..2184467) /locus_tag="SKA53_10914" CDS complement(2183607..2184467) /locus_tag="SKA53_10914" /note="COG0788 Formyltetrahydrofolate hydrolase" /codon_start=1 /transl_table=11 /product="probable formyltetrahydrofolate deformylase" /db_xref="CDD:10656" /translation="MREPSEPQFILKLSCDAAPGIVAAVTSALASQGANLVETAQFWD RQSDRFFLRVAFLAEDGDETRILDALAPIKVQFDMDLNLRHTARKPRLLIMVSRFDHA MLHLLYQVRVGWLDAEVVAIVSNHPDARRIAEHEGLPFYHLPVTRETKAEAEAELLTL VEETDADLVVLARYMQVLSDEFSRALSGRVINIHHSFLPSFKGAKPYHQAHERGVKLI GATAHYVTADLDEGPIIEQEAERVAHSMTPDDLVAVGRDIEARVLARAVKMHLEGRVM LSGQRTLVFT" gene complement(2184481..2185902) /locus_tag="SKA53_10919" CDS complement(2184481..2185902) /locus_tag="SKA53_10919" /note="COG1760 L-serine deaminase" /codon_start=1 /transl_table=11 /product="probable L-serine dehydratase protein" /db_xref="CDD:26049" /translation="MFLSVFDIFKIGVGPSSSHTMGPMTAAARFLDDLRGGAEKIPGA GTLTRLGASLHGSLAFTGKGHGTDRAVILGLIGYLPASLDPDAAEELETEVRRIKRIS PPGLGTLDFDPESDLVFDFGPPLPGHANGLVLSAFDERGNPYMTQTYYSVGGGFVVTE AELETEKAAKTKTLHAEKDAMGYPYPFGSAAEMLEMGRASGKSIAEMKRANECAHQNI QPRELSGQITRICDVMNAVIDRGLRIDGILPGGLSVKRRAKAMHEQLLAERGNNRSQP HVANDWLSVYAMAVNEENAAGGRVVTSPTNGAAGVVPSVVRYYRDHCIGATDAGVQTM MLTASAIGGLIKHRASISGAECGCQAEVGSASAMGAAGLCAALGGTNEQIENAAEIAL EHHLGMTCDPAAGLVQVPCIERNGLGAIKAVSAASLALRGDGTHFMPLDNCIETMRQT GEDMNTKYKETSLGGLAVNLPEC" gene complement(2185906..2187237) /locus_tag="SKA53_10924" CDS complement(2185906..2187237) /locus_tag="SKA53_10924" /note="COG0112 Glycine/serine hydroxymethyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9987" /translation="MTRPDKGRDPFLMSERTHPMLDSAKTTRITDTAIADAVSLELDR QQTQIELIASENIVSRDVLLAQGSVLTNKYAEGYPGRRYYGGCEHVDTVEQIAIDRLK ELFGAGFANVQPHSGAQANQAVFLALLKPGDRIMGLNLAHGGHLTHGSPVTMSGKWFD VVSYEVSKDDLLIDMDNVRKVALETKPKLIVAGASAYPRHMDFAAFRAIADEVGAYLM VDMAHYAGLIAAGEYPDPVPHAHVVTSTTHKTLRGPRGGIILTNDEALAKKFNSAVFP GNQGGPLMHVIAAKAVAFGEALQPSFKQYAKDVIANARALSEVLVSGGLGVVSGGTDC HMVLVDLRPKGVTGKAAEIALERAGLTCNKNAIPFDPEKPFVTSGVRLGTSAGTTRGF GEAEFRKVGELVLMVIDALSANPEGDAAVEAAVLEEVRALCEAHPIYTDGV" gene complement(2187259..2187735) /locus_tag="SKA53_10929" CDS complement(2187259..2187735) /locus_tag="SKA53_10929" /note="COG4583 Sarcosine oxidase gamma subunit" /codon_start=1 /transl_table=11 /product="SoxG, sarcosine oxidase, gamma subunit" /db_xref="CDD:13746" /translation="MARFNLRIAPADLATVSKAFGLTLPTKIGQGEQNGDRAAYCIGP DEWLLHAAEADQQAIVAAFNAVREKTPHSLVVISDRELTISVTGPAALDLLSVACPLD LSRMANGSAKRTVFDYAQVVLIRDGEDAFRIEVWRSFFPHVHGLLEIAARELAIGL" gene complement(2187803..2190805) /locus_tag="SKA53_10934" CDS complement(2187803..2190805) /locus_tag="SKA53_10934" /note="COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, alpha subunit" /db_xref="CDD:10278" /translation="MTDFRVKGRGRVNTDKPIKFTFDDQTFQGFEGDTVASALLANGV HLMGRSFKYHRPRGVVTASSEEPNALIGTTRGKGRFEPNTRATIQEIYPGLKTESQNK WPSLKFDLGAINDRLYMLFSAGFYYKTFMWPRSFWDSVYEPIIRKAAGLGKAPTEVDP DIYASRYMHCDVLVVGSGPSGIAAALTAGRAGSKVVLVDENSEMGGTILSEPSVSIDG QSAWDWLEGAMAELDRMPNVRRMTRTTAMGYYHQNMIGLVQKLTDHMGDVPDGAPRER MWRVRAKEVVLAQGAIERPMVFDGNDTPGVMMAGAAQTFLNRFGVLVGKKPVVLTSHD SAWYSAFDMADAGASVVAIVDTRNELPKALQNAAKARGIKTYLGYTATGTKGRLRVSA LRVNPVRNGKVGAGHMLFCDAVLVCGGWTPSLHLFSHTKGSLDWDADAKVYLPGHKTE DVHIAGAGRGLWGIAAALDDGTKAGMDAVKSLGGKAGSATYEVAEDRTGTGITQKELP TDRNPGKAKAFVDFQNDVTAKDIRLAVREGMKSIEHVKRYTTNGMATDQGKLSNMNGL TIASDALGKEAPKVGLTTFRPPYTPTTFGAFAGYHKGTHFEVTRCTPIDSWAEENGAE FEPVALWRRAWYFPKAGEDMHKAVARECKATRESLGIFDASTLGKIEVSGPDATEFMN RMYTNPWTKLGVGRARYGLLLGEDGFIRDDGVIGRMRHDLFHVTTTTGGAARVLNMME DYIQTEWPDLKVWLTSTTEEWATIALNGPNARKVLEPFVEGADISAEAFPHMSVRECT VAGFPSRLFRISFTGELGFEINVPARHGRALWEKLWEVGKKYDICPYGTETMHVLRAE KGFIIVGQDTDGTVTPLDAGIGWAIGKMKSDFVGKRSLDRPDIVAPNRKQLVGLLTED PKTVLVEGAQIVDNPNQPKPMKMIGHVTSSYWSESLGRSIAMAVVEGGFDRMDDTLHI PAENGAIVKAKVTGTVFYDPAGDRLKVE" gene complement(2190802..2191101) /locus_tag="SKA53_10939" CDS complement(2190802..2191101) /locus_tag="SKA53_10939" /note="COG4311 Sarcosine oxidase delta subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9826" /translation="MLLIHCPYCDDTLPELEFSYAGEAHIARPADPSKLSDEEWRDFL FIRTNVKGVHAERWRHINGCGRFFNALRDTVSDRFLTTYKAGEARPDTTTLEAAE" gene complement(2191114..2192367) /locus_tag="SKA53_10944" CDS complement(2191114..2192367) /locus_tag="SKA53_10944" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10534" /translation="MTHFSGFSLLKNALSGHKNWPEQWPDKQPKAEYDVIIVGAGGHG LGAAYYLAKEHGITNVAVIEKGWLGGGNTGRNTTIIRSNYLYDESAKLYDHALDLWDN LSTELNYNVMYSKRGVMMLAHNVHDVQSFQRHIHANRLNGVDNQWLNPQQAKEFCPPL NISPDARYPVMGAALQKRAGTARHDAVAWGYARAAAKRGVDIIQNCPVIAIRRAPDGS VEGVDTAKGFIKAKKVAVSAAGHTSVVMESAGVRMPLESYPLQALVSEPIKPVFPCVV MSNTVHAYISQSDKGELVIGSGTDQYTSYSQRGGLPLIEHTVAAICEVFPIFNRMRML RKWGGIVDVTPDRSAILGKTPVKGLYVNCGWGTGGFKATPGAAHTLAWTVAKDEPHPI NAPFTLERFTTGRLIDEAAAAAVAH" gene 2192497..2193492 /locus_tag="SKA53_10949" CDS 2192497..2193492 /locus_tag="SKA53_10949" /note="COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:14108" /translation="MESKPVLKIGFILARRFTLSAFANFADVLRLAADEGDRSRPIRC SWRIVSATMNPVVSSCGIPVHPDERLGDPEKFDYVVVVGGLIPAIQDLNPDYIAYLKR AALANVPIVGVCTGAFILYKAGLMEGYRCCVSWFHHNDFLEQFEGLIPVSDQIFVVDR NRLTCSGGVSSAHLAAYLVERHIGSAAARKSLNIMIIDEAQTPENPQPGLPLEFATSD KLVRKALHLIRQNVATPMTVDRLSERLKVSRRMLERHFIEALQISPAEVGLSVRLSVA RHLLSGTDTSITQIAAATGFCDASHFGKVFRTREGVPPDAWRQKDRATAARDLLA" gene complement(2193542..2195116) /locus_tag="SKA53_10954" CDS complement(2193542..2195116) /locus_tag="SKA53_10954" /note="COG1292 Choline-glycine betaine transporter" /codon_start=1 /transl_table=11 /product="transporter, BCCT family" /db_xref="CDD:11008" /translation="MLIRSGVFRGVNPYSSLISAGVILLFVFLVLAFPASSADWIDSA RTFVTFYFNWWYVVLSGVFLVFLIAIAVSKYGSLRLGDADERPKYSYFTWFAMLYAAG QGIGIIFWSIAEPMFHYAGGTPFAEGTGNQAAADMALQVTFFHWGLNAWAIYCIVALA LCLVSYRLKKPLGIRYTLYPLFGDRVEGALGVVIDVIAVFATIFGIATSLGLGVTQIN AGLNHIWDVPISDAVQLVLIAVITAVALCSVLSGLDRGIKWLSQVNMWLTIVLLIFFF AWGPTRYLMLSLGDATLSYAKSLFSFNVYVESVPAEAARWSDMWQGWWTTFYWGWWIS WAPFVGVFVARVSRGRTVREFIFGVVGVSSLVSFVWIVAYGGTALWTELFGPGGVSDA VSANVSMALFATFEAMNVGLIGVIAGVLGTILVTTYFVTSSDSGTLVVATILSEGNEH PMYRHRLIWGTFEGVVAAVLLIVGGSAALSTLQTAAIIAAMPFSIIMVLMCVAIVRCL SLEHKTEASAELGETN" gene complement(2195189..2196310) /locus_tag="SKA53_10959" CDS complement(2195189..2196310) /locus_tag="SKA53_10959" /note="COG3839 ABC-type sugar transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="probable ATP-binding component of ABC transporter" /db_xref="CDD:13158" /translation="MKANAQMEQQSEAIVKFDNVVKRFGNFTAVEKADFEIGRGEFLA IMGSSGCGKTTTLRMLAGLEDPTEGAIYLDGEKVNGKATWDRDTPMVWQSLALFPFLT VQENVEFALKMRGVGKEERRQRAEKWLEKMQITEFANRNINQLSGGQKQRVALARALV TEPKILLLDEPLSALDAHLKVRMQAVLSNLQKDLGITFVYVTHSMSEAFSMADRVVIM SRGQIEQIGTPEEIYREPYNRFVAEFLGSANIFDGVVQGPAGADGWQVAYEGGETILP KSERPDARQGQKVTFIVSAENMQLSLPDSGQPGIEASVAGEEFIGGTAMVFLETAGGQ ELKVQKSHDELSVLNLHPGSKVVVHWESGSCHVLPGENK" gene complement(2196310..2197104) /locus_tag="SKA53_10964" CDS complement(2196310..2197104) /locus_tag="SKA53_10964" /note="COG1177 ABC-type spermidine/putrescine transport system, permease component II" /codon_start=1 /transl_table=11 /product="permease protein of polyamine ABC transporter" /db_xref="CDD:10895" /translation="MGNENRIINALLKLHIVLCLLFIFAPIAGSFVFSLNSDRFPSLP LGEFSTEWYRLIWEDPLVWQGFGNTLVVGLTVAVIATILGFGGAYTDFRYNFTGKSVY VALALLPPTIPVVIMGLAMLAFLSRVNLSGTTISVIIAHGVMCSPFAMAIIRLRLSQM DPDLEAASWNMGGNQWQTLRYVIIPFTKPAIFAALFITMAVSFDEFAVAWFVSGLNET LPVKILGFLQGQVSPRINAIGSLAFLSSMTLIILAQLLLRSPEEEK" gene complement(2197106..2197963) /locus_tag="SKA53_10969" CDS complement(2197106..2197963) /locus_tag="SKA53_10969" /note="COG1176 ABC-type spermidine/putrescine transport system, permease component I" /codon_start=1 /transl_table=11 /product="spermidine/putrescine ABC transporter, permease protein" /db_xref="CDD:10894" /translation="MGSDMTKRPTLFSLILSMPLLLWQLLFFLFPLLFLVAISFWTVR NFQMTPDLNFGNWERVLSRGVFWDAYFRTMVLATTAAVVTSIIAFPASYAISFKMSEK AKRWMIFILIIPFFTSYLVRVYSLQVFLSDAGIINAAFAYIGLGPFPMLNNAFGIIVG MVTLTLPLVVLLQTFSLNFVNRDLIEAAHNLRCGRLRTVFAVIVPSAKVGLVIAALFA FILSFGDFVSPLYLGGGNPPTLSIMITDFTKSGQQWPRAAVVAIMMIITLLTAAFAAV TYAYKERGK" gene complement(2198026..2199099) /locus_tag="SKA53_10974" CDS complement(2198026..2199099) /locus_tag="SKA53_10974" /note="COG0687 Spermidine/putrescine-binding periplasmic protein" /codon_start=1 /transl_table=11 /product="probable binding protein component of ABC transporter" /db_xref="CDD:10556" /translation="MTGAAALATPFLSIRAAAQTTELSMLAWYGHAEPDIVGEFEEAN NVKFVPKYYTGGDNMLGLIAQSPRGTFDVILSDGEYVQQLNAAGYIEELDPADYAFDD FFPEFQKFPGHWQDDKLYSVITRFGFLGVAYNTDAFTEEEASSYDLFADERLTGKLGH FDWHLPNLGQMSLHVGNSSPYDIDEAAWELVQEHTMGLRRQAGGFFDYGGTFSSLDNG QMLAFAGIGDWITGTLEKNGSPVRSVIPKEGGLQWTESFSIGKGSQNQEMAKKWIQYI TSPEGQAKSADMAAYPAIVPSQAGWRVLNETNPAEAQRQNMVLGQRNAMDMIREGLIQ YRQLPVQQSLEDWNDFWSDYKGA" gene complement(2199190..2199963) /locus_tag="SKA53_10979" CDS complement(2199190..2199963) /locus_tag="SKA53_10979" /note="COG1402 Uncharacterized protein, putative amidase" /codon_start=1 /transl_table=11 /product="creatinine amidohydrolase; creatininase" /db_xref="CDD:11117" /translation="MAWPDYQKRVQNGDVPILIPLGSMEQHGHHMPMHVDVLLPTEFA RRVAEQVGALVAPPFTYGYKSHQKSGGGNFFPGTTSLDGATLVNALKDVVKEFVRHGV RNLCIVNGHFENSWFITEAIDLALRELGWGDIHDVKVVVLSYWDFVDQASIEKLYPNG FLGWDIEHGGVLETSLMLRLHPDLVSLQSAVEHAPATFPPYDVYPAKPEWTPASGTLS SPKEATAEKGDILLDVCTKGIIAALTNEFGKAAALASAS" gene 2200085..2200981 /locus_tag="SKA53_10984" CDS 2200085..2200981 /locus_tag="SKA53_10984" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulatory protein" /db_xref="CDD:10453" /translation="MMRKFTNLQTDLLRTFVTVVDLRNYTETGNILGRTQPAISLQIK RLEEVVGAKLLKHEGKQVELTPDGQTLLGYAREMLRLNDRAVANLQQAAFLGTLRIGL PVDYSIEYFQSVIAKFSHENPAVLLDIRCYRSRELLAALHVDDLDMTIAITDEMPAPH VSIYWSERPVWVCARDHKIDPDQPLKVIAHPDGCFYRKRMIDALNTEGRDWRVSFESL GVSALQKAVLDGMGVTALTKKTLLPGMRVLTASDGFPKLSKIHIGLFYKHIKMSDAAL KLIEQITEDVSSFRLPTRARAG" gene 2201103..2202317 /locus_tag="SKA53_10989" CDS 2201103..2202317 /locus_tag="SKA53_10989" /note="COG0006 Xaa-Pro aminopeptidase" /codon_start=1 /transl_table=11 /product="creatinase" /db_xref="CDD:28146" /translation="MDDMLHVMEWHNGEKEFSPFSDNEMARRQNELRDWMGKNDVDAS LFTSYHCINYYSGWLYCYFGRKYGMVIDQKNATTISAGIDGGQPFRRSFGNNITYTDW RRDNFYRAIQQLTPGAKRIGIEFDHVSLEYRQLLQDALPGVEFVDVGQPAMWMRTIKS AEEIKLIKEGARVADVGGAAVAAAVKAGVPEHEVAIASTNAMIREIANSFPFVELMDT WTWFQSGINTDGAHNPVTNKKVQSGEILSLNTFPMIFGYYTALERTLFCDHVDDASLD IWEKNVKVHERGLELIKPGARCMDIAIELNEMYREWDLLKYRSFGYGHSFGVLSHYYG REAGVELREDIETELKPGMVVSMEPMVMIPEGQPGAGGYREHDILVIGEDNTVENITG FPFGPEHNVIKN" gene 2202352..2202483 /locus_tag="SKA53_10994" CDS 2202352..2202483 /locus_tag="SKA53_10994" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MISALLALVIAVTFLSRETQKHGYTVIARGGGLPIFIQTNSAY" gene 2202578..2203165 /locus_tag="SKA53_10999" CDS 2202578..2203165 /locus_tag="SKA53_10999" /note="COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain" /codon_start=1 /transl_table=11 /product="putative transcriptional regulator protein" /translation="MRNRALQEFLDAARIAYSARARDPNSVSLLEQVFATLESPAPQS QSDSGRLPVCKYLTDIANPSVSDEPDLRQVMTTFFSIEPTLRWRRRQGDCSGASEGFA ENHANAMIVGPGGLEPREGVWLGVSLLGPNVQYPNHRHPPQETYLVMNTGDFRQGRNE WVHVAKGETFYNPHNIPHAMRSNDLPLLVFWVLKE" gene complement(2203564..2204340) /locus_tag="SKA53_11004" CDS complement(2203564..2204340) /locus_tag="SKA53_11004" /note="COG3547 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="probable transposase" /db_xref="CDD:12874" /translation="MKPFVKRQKNDRADAEAIAEAAMRPTMRFVAVKSTETQGRAVAF RTHQCMVRQRTQLINALRGHLAEFGLVAPKGPARLKLLENALADESTDLPEPVRHMGS IYVEQIARLTEVIDRLSDELETSSKTDEQLRRLCTIPGIGPVTAGAVAAFAPDLDTFD SGRNFAAWLGLVPRQRSTGGKARLGSVSKMGQTDIRRLLIVGAMSVIRWVVRRGGSTN RWLAALVARKPKMVAAVALANKMARMIWALSTKQENYRMA" gene complement(2204595..2204882) /locus_tag="SKA53_11009" CDS complement(2204595..2204882) /locus_tag="SKA53_11009" /note="COG2963 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase" /db_xref="CDD:23225" /translation="MMKKPETSKDAADKLVKNIRRKTRQTYSAEEKIRIVLAGLRGEE SISVLCRREGIAESLYYSWSKEFLEAGKRRELMRWMPPPAGIVYHDGSIFA" gene 2205182..2205445 /locus_tag="SKA53_11014" CDS 2205182..2205445 /locus_tag="SKA53_11014" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MMPKIGTAFRTISNRKVVAKLLYLLDSYRRTTPSPGHQNLPDIS KKTNNNLVFSVFLDHFRDRFWDHLCRFRAVICQVWRVDLGCTA" gene 2205442..2206410 /locus_tag="SKA53_11019" CDS 2205442..2206410 /locus_tag="SKA53_11019" /codon_start=1 /transl_table=11 /product="site-specific recombinase, phage integrase family" /translation="MILRLRLLSMDQKMPLKLPRYVFRRANGSYRYKRNVPKALREVI PKATVYRQLGESYDEAIRRLPVVHAEIEALFDQERNTPSSVRAKSLVREHLGAWHADV FAEGVVEPEWDITDDFRELAAELEGSTPADVVRQVGSARLKPEPMTLHRVLTEYCAYK CDGSVEHTDLKTRIERIRKDLVIVLGKNRVEWTPLADINRADANTFRDYLLNRMAPNS VLRTLGVIKAAMNHVIIENDLEQRNVFQGIKIKGAGASKDDRLPMSDAQLEALLPEYQ SNPEPMPCLSPSQTAAPALQKSSGSRQTTSTTRLAACTSATTRSAA" gene 2206551..2206766 /locus_tag="SKA53_11024" CDS 2206551..2206766 /locus_tag="SKA53_11024" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27725" /translation="MLMKRLRTQISDPKVTIHSLRHRMKDKLRNTGCPEAISLAILGH STNTVAANYGSGYALEVMREQMERVWG" gene 2206766..2207377 /locus_tag="SKA53_11029" CDS 2206766..2207377 /locus_tag="SKA53_11029" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQRHEDILSPEKARAFNPFLCAISDKLKALIVEVQKQVSGYEAY YKTRERVRRPADQITFERTIEAILCDLCAVTLEPQHNSLHLPLSNKILRAKSRYKGIA LGKTLPDILNILSAPEMDFVVVEKGHSNFKIVDEDLNMAFAGGRQTILRAGQKLLSRI ERFEITKDDLGHASEEEVLVLRAPKRHAASIAEYEEYEDNQAT" gene 2207392..2208075 /locus_tag="SKA53_11034" CDS 2207392..2208075 /locus_tag="SKA53_11034" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTGINAWLGAADISCSYPDANAAQRRLRRIFNNSDFAQGGRLYG GFWQSMSSDERQEHISINQDAVVECDYGQMNILLLYAVAAAQDHLPPGDLYDLSEYGI PVSCRPGIKKVMQTVINSTVLPRRLPKRSRKHFPPRISLGDILAAIQEKHPMIFPLMT SGIGMQLFRTEADILVDVLEALRSKGIVALPVHDAVIVADEDKDTTRTIMKAVFKDHT GITPQVTLG" gene 2208241..2210100 /locus_tag="SKA53_11039" CDS 2208241..2210100 /locus_tag="SKA53_11039" /note="COG3378 Predicted ATPase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:23443" /translation="MKENGIQIDIEQDLLADAISETHGQPYTDDEIELLALDHELTDF QQLQIEIHDELFQCGMGWDTRASWEDIHHAEDGEDTKETLRLKREVQLYAASCFVQHK RKYIDVETHFELTDLEIFRALSQKIAQKFYKWYRSKKLRAAMIDEISFAVVNGTTIDP RMCFALYSGKKYMLPGNSAKRLWRNGYCDLNVWVEPSYRQEAPVDRDDAKPLGSLQDL IDFAIATPLERQILLDWLGWSLKHENLKPRWAIFLYSETKGTGKSTLLELGQALFGEA NTANENGIEGLTQRFSIDSLSKKFIKVEEVKLSSHSDAGNKMKDYITGETAMLDVKNL SKQTIRLKCAFMLTTNHKPTWLEGGERRYFLIDMNHEGHAYGDRKDAFDAITATFRAD LANPKQLKRWYLELVGRSYHTDFDPIILKPQKIGSLLMKELMGEARIEVQDVLEDLLS VYNVTIIPSADQQLLVNHLRLKGQQALRNLLRDLGWVPASIRFDGKTQRVWARGGGSL KNGRVDAPLLSQELDGAIPLGFTWWPISQAISKGWNELTAHVLRPGRYKHTKTEKGKT TVEYELHGRPEENYARGPFADSTSDTDFESYLWQQTKEPVDDLSNLSKEDLKF" gene 2210241..2210660 /locus_tag="SKA53_11044" CDS 2210241..2210660 /locus_tag="SKA53_11044" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLKEILSSADLETETGCWVFEAARKQWPFFGKREYAYRIVAFAM KGWPPKGERAEVVRHICGNEYCVHPAHLAVGTHRENALDETRVSAGYLGATDDTLPLI DKVSSKPTAQMRAVQYREEVSPSLMRTPSGRKPRRRG" gene 2210931..2211167 /locus_tag="SKA53_11049" CDS 2210931..2211167 /locus_tag="SKA53_11049" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFTTFTALALAGGGLRLVLQWQLKRRWQIALSVPQALAGALVVL AGLPEFLKPIPFPIPLGLTLGLLLPDLVLTRRGL" gene 2211164..2211358 /locus_tag="SKA53_11054" CDS 2211164..2211358 /locus_tag="SKA53_11054" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDWQLKEDDVVVLRPLDDIPEHLFRVLDVYDDCITGYSLTGPL EGIYGEPGLELILRVHSRST" gene 2211459..2212703 /locus_tag="SKA53_11059" CDS 2211459..2212703 /locus_tag="SKA53_11059" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="putative integrase" /db_xref="CDD:27725" /translation="MSTQIKYAYRRHNTWIYRRTYPVQLHDILGSSLKRSLHTADAKV AAKRVAELNTTFEAIVLEAQAKLADGVQSGEPPQLAIAVPRYQRARLLGEQPVQEVAA VYLAEVSVRLRPGSYKSVRFALELLTSHVGARKLGDLNDTLGKEVLGYIARLSPNIRK YSQAQGASLAELATLSEEHEGISLTAQTQRRIWRQLQQFLDWCVRSGTLEANPWDGLA VKERPEVRSHRVLTDAQVSLLLNTNDRVLHSALLFCLLTGMRSGEACGLLAEDVSTKG NLGRFVQIRPNAVRLLKSKAAEREVPLHPVLETLLDTTLPTSGRLFPNLSVDKVVKRY AYLRRQHPELGSTVFHSTRKWFITQCERTGVPEHFTATLVGHQSARSENKLTYGLYSA GISDTQKREIIDQIRLPQDVLL" gene 2212700..2212882 /locus_tag="SKA53_11064" CDS 2212700..2212882 /locus_tag="SKA53_11064" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSALRIPDIEAFEERAAIAEYDGGLTRLQAESLAATQQGFASAG AYWRWLADYVVNRGLG" gene 2213160..2213306 /locus_tag="SKA53_11069" CDS 2213160..2213306 /locus_tag="SKA53_11069" /note="COG3666 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAGFIEGIDRGQSVLFPDRLADWISEDSLVRVVDFFVEDLDLQP KTEA" gene 2213559..>2214035 /locus_tag="SKA53_11074" CDS 2213559..>2214035 /locus_tag="SKA53_11074" /note="COG1609 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator" /db_xref="CDD:11322" /translation="MTVAKIKNMEDFAAVSGISRPTLSKYFNDPNSVRATTKLRIEAA LKQHDYRPNVYAINQNRRQTRTIGLVVPNLTDPFFAGIARTLEGLILRAGFTPVLLSS HDGPDQELDNLESLRAIKPAGVLLAPLGRASDLAGVAAFAQDCPTVLFDSNLDGIGE" gene <2214443..2214669 /locus_tag="SKA53_11093" CDS <2214443..2214669 /locus_tag="SKA53_11093" /note="COG1609 Transcriptional regulators" /codon_start=3 /transl_table=11 /product="putative transcriptional regulator, LacI family protein" /db_xref="CDD:11322" /translation="RVGRGAGSALRIAGHDDHPFSKFTCPSLTTISQDYDSISTRSVE TVLALIERGERAQSREAALFSGTLVLRGSA" gene 2214790..2216079 /locus_tag="SKA53_11098" CDS 2214790..2216079 /locus_tag="SKA53_11098" /note="COG1653 ABC-type sugar transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="periplasmic sorbitol-binding protein" /db_xref="CDD:11364" /translation="MKNAFYGATALTLVTAGGAFADAHATELTIAIVNNGHMINMQTV AEAYTEATGVTLNWVSLEEGVLREQVTSDTATGGGQYDIINIGMQEAPIWGAAGWIEP LEFGADYDVDDMLPAMRNGLSADGVLYAAPFYGESSMVMYRKDLADAAGVSIVDNDSW DNVKAAAAAMHDPDNGVYGACLRGKPGWGDNMAFVTTVVNSFGGAWFDADMKPTLDTD EWKAAIEFYVDMLGSYGPPGSEGNSFNEILALYNEGKCGMWIDATIAASFLEVDGVAY AQSPNAGNPVGANWLWAWAMAVPTGTDKTDEAKAFIEWATSKAYIEAVGNHPDFGWGS VPTGTRTSTYAIPEFQAAAAFADAELAAINSAAPEATDIKPYVGVQFAAIPEFPEVGS AVAQEIAAALSGAKTVDEALAASQSAADAIMQEAGYY" gene complement(2216105..2216329) /locus_tag="SKA53_11103" CDS complement(2216105..2216329) /locus_tag="SKA53_11103" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLNGTSIQNNNNTMAGVWSRRGMVRLATAQFSLDDAKLRNYVSF GMTGRIVIGGSIAQAMRFYLDKVEGIRPAK" gene 2216328..2217185 /locus_tag="SKA53_11108" CDS 2216328..2217185 /locus_tag="SKA53_11108" /note="COG1175 ABC-type sugar transport systems, permease components" /codon_start=1 /transl_table=11 /product="Binding-protein-dependent transport systems inner membranecomponent" /db_xref="CDD:10893" /translation="MTLFFSFIRYVLASTNRPEWTSPSISNWRGFGNYQYVWNQDSFW LAIQNSLLIVCSILFLTVILGVAIAILINRTFPGRGIVRVLLISPFFVMPAVNAVLWI NMLLDPVLGLQGAAVAGANDLVALLRDAPVVGSFFSLWPQFEPISFRATQTSAYAVIM MVTWQWTPFAVLILMTSLQSEDQQQKEAAILDGASRWSQFRFLTLPHLARPIAIVVMI QAIFHLSLYAEIEIVSRGNGNKNLPYYIGELVNNNIGAASATGIFAVILANIVAIFLL RMLGKTLME" gene 2217197..2218030 /locus_tag="SKA53_11113" CDS 2217197..2218030 /locus_tag="SKA53_11113" /note="COG0395 ABC-type sugar transport system, permease component" /codon_start=1 /transl_table=11 /product="Binding-protein-dependent transport systems inner membranecomponent" /db_xref="CDD:10269" /translation="MAIVAQHTKFSKVAWPVLAWAVGLLFFFPIFFMVMTSFKTDADA VKPEFLFRFTPTLENYTNMTNNYDYWRFATNSVITSVTATLFTLFVAVPCAYAMAFNP SRGTKDILMWMLSTKMLPAAAVLYPMIFMAKSLGIYDTKFLIVMVLSLINLPIAVWML FTYFKDIPKDIIEAGQMDGLNTWGEVREILIPLAWGGIASTALLVFIFCWNEAYWTVR LTTIDAATLSKLIEGNRAPEGLFFGRLSAVSTAAVGPIVVLGWFCQKQLVQGLTFGAV K" gene 2218039..2219043 /locus_tag="SKA53_11118" CDS 2218039..2219043 /locus_tag="SKA53_11118" /note="COG3839 ABC-type sugar transport systems, ATPase components" /codon_start=1 /transl_table=11 /product="ABC sorbitol/mannitol transporter, ATPase subunit" /db_xref="CDD:13156" /translation="MGRIVLQKVSKKFGEIEVIPPLDLTIEDGEFAVFVGPSGCGKST LLRLIAGLEDNTSGDIIIDGNTVTQVPPSKRGLAMVFQSYALYPHMTVRKNIGFPLRM EKMDQAEIDAKVNTAATSLNLTDYLDRKPGQLSGGQRQRVAIGRAIVREPLAFLFDEP LSNLDAALRVGMRMEILELHNKLKTTMIYVTHDQVEAMTMADKIVVLQAGVIEQVGSP LELYRAPRNLFVAGFIGSPKMNLITGPLAAKYGATTIGIRPEHIDVVASGGTWEGTVS VSEHLGSDTFLHVKVAGFEQVLTVRSIGDIAVKHGDKVSLSPRLGELHKFGADGLRIG " gene 2219040..2219813 /locus_tag="SKA53_11123" CDS 2219040..2219813 /locus_tag="SKA53_11123" /EC_number="1.1.99.21" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="sorbitol dehydrogenase" /db_xref="CDD:25396" /translation="MTRLLGKTALITGGARGIGRAFAQAYLQNGARVAIADIDRDLCQ ATATALGDQVLAVHMDVSDPASITQAVDQTIAAFGQIDILINNAAVFSAAPIVEISPE DYARVFDINVKGTLFTLQAVARHMIDAGIKGKIINMASQAGRRGEPLVAVYCASKAAV ISLTQSAGLNLIRHGINVNAIAPGVVDGAHWDGVDAFFAKYENKPAGQKKAEVGAAVP YGRMATPTDLTGMALFLATSDADYIVAQTYNVDGGNWMS" gene 2219813..2221309 /locus_tag="SKA53_11128" CDS 2219813..2221309 /locus_tag="SKA53_11128" /note="COG0246 Mannitol-1-phosphate/altronate dehydrogenases" /codon_start=1 /transl_table=11 /product="Mannitol dehydrogenase" /db_xref="CDD:24525" /translation="MKDHMHKNSPMKLNAANLDAFPETILRPRYDRAALRAGMVHIGV GNFHRGHQAWYLHRLMQQGLAHDWAIIGAGVRATDATMRDKLLAQDCLTTLIELSTNS SGAEIIGSMIDFLPVEDGNAALIAQLAQADIRIVSLTVTEGGYFIHPATKGFDAAHPD IVHDAANPTTPRTAFGAIVAALKLRKEMGLGAFTALSCDNLVSNGDILRQTVVSLAHL SDPALADWIDNTCSFPNSMVDCIVPATGQNELALAKGFGVDDAAPVTHEDFRQWVIED HFCAGRPDWDKVGAQFTNDVHAFEAMKIRILNGGHQVISVPAQVLGIDTISGCMEHDL LGPLFLKIAHEEIAPHVDAVPDMTPSAYVKLIQRRCANPMIVDTTRRVAFDGSSRHPG FVLPSIRDGLAAGTSIDGLALIEAAWARMCAGTRGDGAVIAPNDPFWADLNVIALRAK DDPAAWLSMTHIYGDLAENARFVAAFKTALRRIWAEGMSAAIQNYLSR" gene 2221881..2222045 /locus_tag="SKA53_11133" CDS 2221881..2222045 /locus_tag="SKA53_11133" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKLGVDHGLPRPAVRIVSRDRSHILKTGNDSHRAKASLETAKQK QKDTRNIAIG" gene complement(2222218..2224536) /locus_tag="SKA53_11138" CDS complement(2222218..2224536) /locus_tag="SKA53_11138" /note="COG0542 ATPases with chaperone activity, ATP-binding subunit" /codon_start=1 /transl_table=11 /product="Chaperonin clpA/B" /db_xref="CDD:10413" /translation="MPSFSTTLEQSIHGALALANERKHELATLEHLLLALIDEPDAAR VMRACSVDLDDLRKDLEDFIDDDLSTLVTDVEGSEAVPTAAFQRVIQRAAIHVQSSGR SEVTGANVLVAIFAERESNAAYFLQEQDMTRYDAVNFIAHGVAKDPAFGETRPVTGAA DETEQTTGADPEKESALAKYCVDLNAKSKKGDVDPLIGRAHEVERCIQVLCRRRKNNP LLVGDPGVGKTAIAEGLAYKIVNKDVPDVLAGATIYSLDMGALLAGTRYRGDFEERLK AVMTEMENHKDAVLFIDEIHTVIGAGATSGGAMDASNLLKPALQGGKLRCMGSTTYKE FRQHFEKDRALARRFQKIDVNEPSVPDSIKILMGLKPYFEEHHHIKYTAEAIKTAVEL SARYINDRKLPDKAIDVIDEAGAAQHLVAESKRRKTIGTKEIEAVVAKIARIPAKNVS KDDAEVLKDLEKSLKRVVFGQDRAIEALSSAIKLARAGLREPEKPIGNYLFAGPTGVG KTEVAKQLADTLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGMLTDGVDQNPH CVLLLDEMEKAHPDVYNILLQVMDHGKLTDHNGRTTDFRNVILIMTSNAGAAEMSKNA LGFGREARTGEDTAAIERIFTPEFRNRLDAIISFGALPKEVIMQVVEKFVLQLEAQLI DRNVHIELTQAAAEWLADKGYDANMGARPLGRVIQEHIKKPLAEELLFGTLVKGGIVK VGVKNGELDLTFEAPQQGRITGSNKPPLLTAE" gene complement(2224714..2225490) /locus_tag="SKA53_11143" CDS complement(2224714..2225490) /locus_tag="SKA53_11143" /note="COG0491 Zn-dependent hydrolases, including glyoxylases" /codon_start=1 /transl_table=11 /product="hydroxyacylglutathione hydrolase, putative" /db_xref="CDD:10362" /translation="MTNTASPVELVTVPCLRDNYAFVLHNAVTEQTVLIDAPEASPIK AVLAQRGWQLTDILLTHHHDDHVGGLQSLRGDARVIGARADAHRLPPLDLAVAEGDLL HICGQATHVIDVPGHTIGHIAFHMPDAGLVFTGDSLMALGCGRLFEGTPAQMWESLLK LRALPQQTMVCSGHEYTESNARFAVSLDPDNADLRLRIKTIETARAAGRPTVPSGLDE ERRTNPFLRADDAGLKAHLGMQNQPDVDVFAQIRASKDRF" gene 2225552..2226316 /locus_tag="SKA53_11148" CDS 2225552..2226316 /locus_tag="SKA53_11148" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11933" /translation="MHLDVLDLRNFYYRSALGRAAQQVIRNELVTLWPEAKGQVVAGF GFAVPLLRPYLKDARRVIGLMPGPQGVMPWPPEGRNVSILCEDTLWPIETGHIDKLVV MHGLETSEHPTALLDEMWRVLGPGGRAVVVVPNRAGLWSRTDKTPFGYGRPYSLTQLD AQLRKHRFVTERTLSTLFQPPSRSRFWRRSAAMFERVGPKIPVIAAGGVLMVEVTKQS AAPTRPGLKEAVRRPLKALEGITAPQPKPESARTSD" gene 2226360..2227460 /locus_tag="SKA53_11153" CDS 2226360..2227460 /locus_tag="SKA53_11153" /note="COG0116 Predicted N6-adenine-specific DNA methylase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9991" /translation="MTQTFEIFLTATPGFEPALLAEAQAAGFVGERTQGGVTMTGGWP DVWRANLVLRGATRVLVRIGSFMAFHLAQLDKRAHKFPWVDVLRTDIPLRVEVTTNRK SKIYHAGAATQRIETALKANGYQISAEAELVLKLRIDDNRVTISVDTSGESLHKRGHK QGVGKAPMRETLASLFLRDCGYHGTEPVLDPMCGSGTFVIEAAEIAAGLYPGRSRSFT FEQLASFDPVAWDAMRQHSPTPTDLRFYGSDRDAGAIRMSRENADRAGVMGLTTFDTL PVDALTRPDGPPGLVICNPPYGDRIGNPKLLFGLYASLGQTLKAQFSGWRVGIVTSDA ALANATGLPFKPKGAPVPHGGLKVWLFQTGKL" gene 2227471..2228361 /locus_tag="SKA53_11158" CDS 2227471..2228361 /locus_tag="SKA53_11158" /note="COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10203" /translation="MTLFAGLSAFPITPATPDGQIIADDLARMLLRLKAARVDSVGLL GSTGTYAYLDRAARQEAVSIAAETLAGDVPLIVSVGALRTDAAVALAQDAAKGGADGL LMAPVSYTALTQEEAYQHYLAVAGATGLPLSIYNNPGTTHFTFSIDLLVRLAAIPTIT AVKMPLPAQGTLADDLAALRNYLPADFVIGYSGDWGCAEALLSGAQTWYSVVAGILPE PALRLTQAALAGDAARTAELNATFTPLWALFRAHGGLRVAYGIAHLLGLTKALPPRPI LPMPDSAMPDLRAALDIALA" gene complement(2228369..2229682) /locus_tag="SKA53_11163" CDS complement(2228369..2229682) /locus_tag="SKA53_11163" /note="COG1004 Predicted UDP-glucose 6-dehydrogenase" /codon_start=1 /transl_table=11 /product="UDP-glucose 6-dehydrogenase" /db_xref="CDD:10733" /translation="MIGTGYVGLVSGVCLADFGHEIVCIDKDEAKLALLRDGKTPIFE PGLDALLARNMAAGRLSFTSDLRAAIDGVQVVFIAVGTPSRRGDGHADLSYVFSAVQE LAEVLTDHVVIVTKSTVPVGTSRKVAELMRATNPAQDFDVVSNPEFLREGAAIDDFMH PDRVVVGVQTDRAAAVMQAIYRPLTDRGFPMLVADLETAEMVKYAANAFLATKVTFIN EMALLCERTGADVKAVANGMGFDQRIGPKFLQAGPGYGGSCFPKDTRALARIGQDHAA PLQIVETVIKVNEEVKRVMIDKIIDLCDGHVRKKSIAVLGLTFKPGTDDMRDAPSLTI VPALVGQGADVRVVDPQAFREAEDLLPGVTWHDDAYTAVQGADLVVILTEWDDFRTLD LARLAGSMAEPRMADLRNVYHCDDAVAAGFSYYTGIGRKSVMPPV" gene 2229681..2229788 /locus_tag="SKA53_11168" CDS 2229681..2229788 /locus_tag="SKA53_11168" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAIFIAIAPFVTMSQQYLIFSYCGVGRRSSDQYPQ" gene complement(2229977..2230354) /locus_tag="SKA53_11173" CDS complement(2229977..2230354) /locus_tag="SKA53_11173" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MILAAVVALGLVKLVLPIVQDALHTGDGAVIRAEVRLINQCPLA NSSFAVRNTDTGRSIPFSNGRAQIEGAQGTYLQIVLASRFDDVTFSGEKQRIKPQMTM TADCTSGERMRGVMDGIGDKFGN" gene complement(2230442..2232220) /locus_tag="SKA53_11178" CDS complement(2230442..2232220) /locus_tag="SKA53_11178" /note="COG1344 Flagellin and related hook-associated proteins" /codon_start=1 /transl_table=11 /product="flagellin" /db_xref="CDD:25583" /translation="MALAIATNTGALMAAASATSVNKDMETSMERLSTGKRINSAKDD AAGVAIASRLTSEIRGTNQAIRNAQDGQALINTAEGAHKEVVNILQRMRELAVQSSND TNDATDRTNLQAEMTALTSEINRIAGATAWAGQNLLDGATPNPASLSTTHTDAKVLSL HIGSGTGAGDTIAVNIKAISAAALGVGGTSSTPTVSATLTGSTAAGTLTPTASGTGGT LVVGGGFQATDTYSVTINGVALSVDADSTDQYADDKNGIATQLKDEIEAALTTVTTGA TAAQRALYGITVADNGSGTLTIAQAGPSVSNVLDTKAGGSTGTLTKTGAGELTFSGLV ATGDSFTVDVDGKTYTVTDAAGFTLDDDGFASNLVAQINADGVPGLTATSAAGVVTIT RAAAAFTGVAAASTIGAASITENAGTFTVAGAGVGSTFSIDIDGTTVTGTVASGDGFG DTNIGVAAQIAQAIKDQGIKGLTVSVGTGVNADKFTLSRDGSVSIASASDAATAIANI DTALTRVNTQRANLGAVSNRLDNTVSNLTNVVINLEGGRGRIEDADFAAESTSLAKSQ ILQQASTAMLAQANASKQSVLSLLQG" gene 2232500..2233114 /locus_tag="SKA53_11183" CDS 2232500..2233114 /locus_tag="SKA53_11183" /note="COG0790 FOG: TPR repeat, SEL1 subfamily" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10658" /translation="MLLVAGTGLAAQGSDASPDPFDAAVDAVKAEDFGLANDLFLALA EQDDHDAQFNLAILLEAGKGTPQNYTLALEWAWLAQLGGVERAKELADRLAEKLLPAT KDAIAERIKSHLQDRLSRGNSAAIMQFVAFNQTILTRPDLETAYIWTLIGAALNIEQA VQTRNDIEATLETRVVLAAQETARGMFVDQDMASLFAGDGVASR" gene complement(2233066..2233470) /locus_tag="SKA53_11188" CDS complement(2233066..2233470) /locus_tag="SKA53_11188" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVSGQSITNWLLALNLLLVGWLLIRVMRDQRDLSDIKSSLKQIV QSVPPTNSPEVTVTQVDTPDVAQLTQRVAANHGPQAKSASNIVAFIAARQAGRSLEEA AQQYDLTEDEAFAISVSYRDATPSPANNDAMS" gene complement(2233513..2233782) /locus_tag="SKA53_11193" CDS complement(2233513..2233782) /locus_tag="SKA53_11193" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSETGVATQQLDAALDRLKACRASDKDYIAASENVLAEMSKLGP LGPNTSDDLANLYQKLTQEFLYAEKCAELRGLGHAGNTGSQTSKY" gene complement(2233782..2234120) /locus_tag="SKA53_11198" CDS complement(2233782..2234120) /locus_tag="SKA53_11198" /note="COG0564 Pseudouridylate synthases, 23S RNA-specific" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVDATQNLTGTVTSAKMPEVNAVPRVNISPASSGDTAGLGVAAP VNPVSASSRPAVEINSAAAEVLASMQSMPVPVDIEAVERIRASIQANEYPVDYDKIAQ GLADSFESMT" gene complement(2234156..2234869) /locus_tag="SKA53_11203" CDS complement(2234156..2234869) /locus_tag="SKA53_11203" /note="COG1261 Flagellar basal body P-ring biosynthesis protein" /codon_start=1 /transl_table=11 /product="flagellar basal-body P-ring formation protein FlgA" /db_xref="CDD:10978" /translation="MMRWLSIMLFWPFALFAQDQAATRIVTGQEVQQAIIERLASVGE IAAPNVMAEKQFYACDAPLEVEQAFNGWRSVTVRCPSPVEWSIALRAQVQGALPQVPK VTEGQVTQAVFLRRPLRSGDRIQLDDLEIRPIDPLSVNNVYITIEDVVGRVLSQSLTP RVPVSPRHLQRDWAINADDIVTLQIVNGGIEIESPGIALEPGQIGDNIRLRNLSSGSE VIGRISQERKVQVISKMAP" gene complement(2234871..2235212) /locus_tag="SKA53_11208" CDS complement(2234871..2235212) /locus_tag="SKA53_11208" /note="COG3170 Tfp pilus assembly protein FimV" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLGQVILPLLAVFMLPHVAKAQEPWVLLCMADCSDTAASGQRH IIAPGENLLGILRQYRYGSTGLQTVIEKIVQDNPRAFLRGDPDRMVAGQTLILPEASG FPTVPDDIYVF" gene complement(2235218..2236336) /locus_tag="SKA53_11213" CDS complement(2235218..2236336) /locus_tag="SKA53_11213" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRLLAPVLLLVLTCGPGFADIVRVTGRAAVTNNDTDRAQRFALE DALYLAALEGGADVSGFSMADNGALTGESILLRPNSRILDYSVVSQGPSGHHYEVVID AYVGTAPALGCAVRPAINLISGNPQINVGYTAPLWATEALELAHDATIMGLGATPQIN VSARDISLATVGQGGSKVPAGFDYDTLMGGQPRVEASRSNLIPDTARGLHLSWHATAP GLQATTLTVTLQAQVLDPAAPGRAQQMTTSHVVAVSANTPWRTVNVLARKDAHEVAKS LADSVSAELATWLGSYACAPLQGFLTDAGTGRFRIDLGSRDGLTRQSLAFAEGHGQPW TVFRIVELSPSQAILSPMNARRAGAHLAGAKVRFEIGG" gene complement(2236387..2236875) /locus_tag="SKA53_11218" CDS complement(2236387..2236875) /locus_tag="SKA53_11218" /note="COG1370 Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9723" /translation="MIKTCAAFTIALALGACNMNAHAPYNAAGISPAAKEVLEIETAL RGTDAAVIQQTVPPIIGTGYATISAQPAHNINQKRLMAIRVARLDAMRDLTEQVHGLR LSAQTTVVDAVLQNDTTRASVDGTIRGARTVRINPVGRDTYEVVLELDRDMIARIMMA VR" gene 2237065..2239170 /locus_tag="SKA53_11223" CDS 2237065..2239170 /locus_tag="SKA53_11223" /note="COG1298 Flagellar biosynthesis pathway, component FlhA" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein, FlhA" /db_xref="CDD:11014" /translation="MSASETAIPRHLLGRSLTSITLPLGILMLVAMMVLPLPAFLLDI FFTLNIFMSLLILMVALHTYRPLDFSSFPSLILVATVLRLALNVASTRIILSEGHLGT SAAGAVIEAFGAFVIAGNYVVGIFVFVILVIINLVVITKGAGRVSEVSARFTLDAMPG KQMAIDADLNAGVLTAEEATVRREDVSREADFHGAMDGASKFVKGDAVAGILILAINV IGGLTIGMLQHGLSIGEASELYILLSIGDGLVAQIPSLLLSIATAIIVTRVSSSQDMA EHIKGEVSMSRAWFPVAGVLLLIGLVPGMPTILFGGMGLAAGVAAYFFRKQEQTDATQ DKSDAKTPVEDSNPNSLNITDVADLSAVTLLLSYPLLSMVDKDDGGPLARRIVTVRKE VSQALGFVLPSVRIRDDLGLTANEYRIKIGQTVVAEDKIYPDQKLALPSGTSRVKIEG IDVKEPSFRIDATWIQSDREFEAEANGYIIIEPETVLATHLSQILYKYASELIGQDDV QELLDNLSKVVPQLVQSVVPKLMPLHNLTAVLRQILRERIPISDLRRILELISEMASK NMSVTETAEALRPQLVGLLIQQTTPLNTPLPVVTLDSAFEHLLINSAKRSEGDQLLLD GSLAEQMVKSLVRVNEEQTEAGKKPFLVVSPQIRRKLSSFLRQHIADFPVLSFTELPD GRRVEVVATVSGDEQMATE" gene 2239212..2240633 /locus_tag="SKA53_11228" CDS 2239212..2240633 /locus_tag="SKA53_11228" /note="COG0542 ATPases with chaperone activity, ATP-binding subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:8906" /translation="MTEYIFRASDPDTAMEKAVRELGDDAMILSVRKMGDVTEVRATR ESDMADQLQWDDRKPQSWPSDAMDLGAAMRTARARRNGSDPAPTPRRAADTNAAPTRE KSTDMGVTAAPVARPAEEPETILDATQFEELFRQRLAQAPDDQPEIVSNAAEPVSRQQ DPVERETATAPNSSAAQTVPWTPDQPDSADTWNEDRAPAAQVPAAERPSATILNEGAV AQHRISIFDYGFPEDIAQSCAVAPDLHTLQAQQDHACHLLAARITDDAEISLVHENKA LFLFGPPGAGKTTVAAQLAFERLRTTAFQPRLVQVPQKGFVSCGRLQQYATLLNSEFR TLSFEDNEDIARNDIIDCDLTEPDAIAEALEWVTERSSGSDVSPLLIIPSTWSIAAIK QYTMMFEAICPATVLTHMDIGGIDIAGLSAMADANIKLIAANETRKITEGLTLVDRDS VERFLQVTLATSVADDQQSSTRH" gene 2240700..2241068 /locus_tag="SKA53_11233" CDS 2240700..2241068 /locus_tag="SKA53_11233" /note="COG1516 Flagellin-specific chaperone FliS" /codon_start=1 /transl_table=11 /product="putative flagellar protein FliS" /db_xref="CDD:11230" /translation="MLSPAAVYKRQQQNPGFNPEDSHQLIKATLEYLVRSLGILMQEP ARDSEIFQTHIARVLTSIYVLQSSLDFERGGDISVNLFQLYEYSRQQTLKLMRNDDTA QIDRAYYSISEIFDAWQKIK" gene 2241050..2241364 /locus_tag="SKA53_11238" CDS 2241050..2241364 /locus_tag="SKA53_11238" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAENQVNPRLHDAHLIALEKAQDALEDALRDTDFDAAERINMEM RERFAGLAHVHADQIRQDLPRLSAIIGRHTQARNDLVEQVACLQRNQRRTQAVIAAYA KH" gene 2241376..2241666 /locus_tag="SKA53_11243" CDS 2241376..2241666 /locus_tag="SKA53_11243" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAAMVADVFVEKADADCKTAFTRMIKHGFLNIRVVSGERNSIAC SEIMKTTDALLAKMTELQRRLTRPASNMTKDENQVGATDTADTICRFFSTSQ" gene 2241907..2242290 /locus_tag="SKA53_11248" CDS 2241907..2242290 /locus_tag="SKA53_11248" /note="COG1126 ABC-type polar amino acid transport system, ATPase component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSRDLLLTYADCTPEKLYSVAENMLFFLAEIEDDNALEHCHSFS YRSVHFDKADRPRRLKGLFLDPLAAVKQQTSSDTVFKSFRAFVFRSRVEGNLVAPIEW KVRNHKELISLADILDVEVSFSDAM" gene complement(2242300..2242803) /locus_tag="SKA53_11253" CDS complement(2242300..2242803) /locus_tag="SKA53_11253" /note="COG0068 Hydrogenase maturation factor" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLDAANIKNAFLCFFVSVGILTVDPRPVHAQETTFVAKGPIVID VLGGLDWMRCSIGQVWENDTCVGSALLVPFASVASLIERAERNIGPGWRLPSREELER LIVINPEPPMIDQNVFPNTYPGLYWTGDTNWLMSNAPWSINFFTSYAYGRADKTRTVA VRLVRPR" gene 2242921..2243640 /locus_tag="SKA53_11258" CDS 2242921..2243640 /locus_tag="SKA53_11258" /note="COG1291 Flagellar motor component" /codon_start=1 /transl_table=11 /product="Flagellar motor protein MotA" /db_xref="CDD:11007" /translation="MIIGAMIVGGGVAPFVDVPSILIVIGGTFFAAMYTTPLATFLGS FGAMSKAFLPPVKKQNVLVERMVELAGIARKDGMMALEGQAVPDKFFEKGMQLLVDGA DETKLVKQLTAEIKSMKSRHEANQLVVKAWIDLAPAMGMIGTLIGLVLMLGNMSDPKA IGPAMAVALLTTMYGAIVANVLFGPLLTKLEGYTAYEVIYREMVVLGLRNIARGESPR NIQDQMASNLPPKMQAKIDAA" gene 2243668..2244903 /locus_tag="SKA53_11263" CDS 2243668..2244903 /locus_tag="SKA53_11263" /note="COG1360 Flagellar motor protein" /codon_start=1 /transl_table=11 /product="flagellar MotB protein" /db_xref="CDD:11076" /translation="MSEAVEAEEEQDEECPKCPPVGAPAWMATFADLATLLMAFFVLL LSFAEMNVPKFKQISGSLKDSFGVQKIIPVVEQPKGTTVLELNFSPSPSPSVTEEATQ ETTEIKEPELKIPTDNRDMDGEDKQLEGETDADGLGGETAENIADNENMSDAEKLAAA LEQIGTAVNIEAEIVDGKVAIDMNAEDASPQELIEKFQRVGQAIEIAGLATGKAEQEI LFGGLDETLNDLISMVSEIQRQQQESGGATLDEALSQMARATEKALEAEAQLRANLQD EIDQGLVTVEQRDGKVFVNLGAGGAFPSGSADLTLQARGIIDELAAVTVDPTSKVVVS GHTDNVPISFGALYRDNWDLAAARAASVVQEIEASIPAPGREMSAISFGETKPVADNA TAEGRERNRRIELEIEFEQ" gene 2244908..2245711 /locus_tag="SKA53_11268" CDS 2244908..2245711 /locus_tag="SKA53_11268" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="site-specfic recombinase, phage integrase family" /db_xref="CDD:27722" /translation="MGQSETAPFIEGRQSAMLNKLKLAGLGGVPSAQHARFTKRKSDQ QGWTAGVFLKSRANGDRVWLQRIMIDGKRREIELGSFLTLSLAEAREAAQENRKTIAE GGDIFAELRKQHRQDIRDRIRRLSAKLSEPASLRTPQPVLQDEVLTPLPLDVEPPTAP ITQTASEESDVAKVRALGPHIDAALSVILDAVPADIDSGYVSQDMLALSTACGVEMLE RACRITLEMGDCTLLSIVAILDQDAATTDEADNANIIAHSNIRGAEHFH" gene 2245724..2246533 /locus_tag="SKA53_11273" CDS 2245724..2246533 /locus_tag="SKA53_11273" /note="COG1484 DNA replication protein" /codon_start=1 /transl_table=11 /product="TRm23b IS ATP-binding protein" /db_xref="CDD:2228" /translation="MSTNATYEALRALKLDGMADVFAELAAQTARSPQDPAQWVAHMV AREKSIRDAKRLQSRLRAARLREPEATMDKVDFTAERTLDRGAFEALRGTDWIETHRT VLMSGPCGVGKSFLACALGHEACKLDKSVMYFRMPQLFAELASAKQGGTYDRLFSKIK RTDVLILDDWGPDLMTPAQRRDLMEIVDARYERKSTVITSQLPIEKWYDIIADPTLAD AILDRLVHQAYRFDLAGVSMRKAPAEVKNDAPSAKPSFGRLLSRPAHPANR" gene complement(2246606..2247943) /locus_tag="SKA53_11278" CDS complement(2246606..2247943) /locus_tag="SKA53_11278" /note="COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog" /codon_start=1 /transl_table=11 /product="Sigma-54 factor (RpoN2)" /db_xref="CDD:11222" /translation="MTPNAHLAQKQSLVFTPQLQQAIKLLLFNNLELSNYVEKIAEEN PFVEVELPEMRVPAPRVMASSQRDPSFDPISLLADRSTQGFAAQLFAQVDDILTEQSE RAIGYAIASHVDPSGWLSIPTPLLADNLGVDDACVCTVLRKLQSAEPAGLFARNLAEC LVLQIVADDPDRSALLIIMQNLVLVERGAIPELRRKTGCSAEEVKRLLRRLREFNPKP GLALSDDVMMSARAPDILAARGQDGEWYVELNGATLPILKVDEVEGRRVRKLVKHDSD QAYVRDTLGNARWLKRAIAQRNETSIKVAAEIVRFQKAFLEHGMQHMRPLKLKTVADA VGLHESTISRVTSSLMMQTPQGSFPLKTFFSTAIDLDGTDEGVSARMVREKIRNLIGA ENPSGPLSDEFIAQSLQCEGLSIARRTIAKYRKLDKIPSSSQRRRAYRLRPAV" gene complement(2248206..2248505) /locus_tag="SKA53_11283" CDS complement(2248206..2248505) /locus_tag="SKA53_11283" /note="COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTITPMDSLDNADQSQVAPKVRRRSAKKSCQRCMVIRLFLISAA CIGILQIIAPSTFAILQGLGPLTLSILFVGGFGIIAVVKSVAEHLATRPDDSESQ" gene complement(2248506..2249264) /locus_tag="SKA53_11288" CDS complement(2248506..2249264) /locus_tag="SKA53_11288" /note="COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVNGNVPEESVVEVTPPGPLKLVKIKGSALQREFFLQADDVIVA VNGKHWSQIGSIEGTVRTAIEMTGRPILATVVREKKMFSVFLSKPFPKGSPVLDGDEA QDFNEFKPSMSIERIRTLSNYAIVADGQNAADVFEMRKSLLAMIFPPLWLIGRRLWEP LAAFTCAIMTAFVIHQSLGLLIYFFMCVYVGMRQVPLGLLSMQREGMRRRMVVAARDE QEAQLIALRFNEKFKFKFTSQEKANGLAIDVEIV" gene complement(2249264..2250094) /locus_tag="SKA53_11293" CDS complement(2249264..2250094) /locus_tag="SKA53_11293" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:2198" /translation="MVARSPKFADSPDLDQSIQIALDAAEASMDVTAEFERISAQFEQ TVSAAQRLEKMARIALMVGGGVAVFAVLLMAMIWQRSSYGLERLSATNTELLSILAEN VSTMDEKLAPIGAIDSQMAQLRGELTSLNERMSVVAQALDDTSAFKADLTAMTEKLSA LDTLENAQMRSDAIQQEIGDRIATLNGELAMNVSTVMRDTFAAQSDAFAEMITSMSQA ADATGNGDNAEEFVKIKEQMETRLQEIAQRINRLQAGSSAAPGSQAQSRQDPDIIKFP " gene complement(2250309..2250536) /locus_tag="SKA53_11298" CDS complement(2250309..2250536) /locus_tag="SKA53_11298" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTKIKRRKHETRGEMISTFALAVSGMFFVGEARLYQDEGATGHA LILGLCGILSLAGALRFHLHNLWRWFGQFRK" gene complement(2250533..2251684) /locus_tag="SKA53_11303" CDS complement(2250533..2251684) /locus_tag="SKA53_11303" /note="COG1377 Flagellar biosynthesis pathway, component FlhB" /codon_start=1 /transl_table=11 /product="Flagellar protein FlhB" /db_xref="CDD:11092" /translation="MADEASDGQEKTEEPTQKRLEKAKEDGQVASSKELFVLSTLSVG FLLYFGLLPFLSGLLLEWSALLRFSGEAGLHDEIIRNSSTSFAFIFWKSVIFALPLLV IIVLTQMAMSGSINWSASALAFKGSRINPVNGLKRMFSVKALVEMLKAVGKVASLIGA AIFVFSSEVDKLLTSQATHLFGGLSRLGDVFIFLMIVFLLVLAVIAMFDVVYQQYDNN KKLKMTLQELKDESKQTEGSPEVKAKIRRLQMTAGSRAKQRREAMEQVPSATAIITNP IHFAVALKYEIGTRGAPTILAMGRGHQAQEIIRLGKEAGVTVFSNELLARALFFAGRI GDEIPPPLYTAVAAVLAFIYQLNKGEQVDEPDVDLPDDMLFDANGKSLS" gene complement(2251677..2252504) /locus_tag="SKA53_11308" CDS complement(2251677..2252504) /locus_tag="SKA53_11308" /note="COG1684 Flagellar biosynthesis pathway, component FliR" /codon_start=1 /transl_table=11 /product="Flagellar protein FliR" /db_xref="CDD:11395" /translation="MISQVPTLDDVLGLGGLELQSLIDFMLVFFLHTLRLSAFFLSAP FFGAAAIPVQVRVIVSVAIAFGFYGLIDVPDPQNLPFLSMIEVALIEVVIGLSLGLAF TIAFSAVALTGEKIAASAGLGFAAQMDPNSGGQTPVISQFLNLFAIAAFLSLDGHLHM IGLIRMSYEVLPLGQPFKFSAFITGGLAAAGHMFTIASQLMLPVVSILLLANITVGVV TRSAPQLNLFSFGFPLTILTCFVALYVSTAPFASGIAEMIEFILEFIEDTIGEAGVG" gene complement(2252501..2252767) /locus_tag="SKA53_11313" CDS complement(2252501..2252767) /locus_tag="SKA53_11313" /note="COG1987 Flagellar biosynthesis pathway, component FliQ" /codon_start=1 /transl_table=11 /product="Flagellar protein FliQ" /db_xref="CDD:11695" /translation="MEFDSNIESLRAAFWQIIIASGPILGVALTVGLIIGILQAATSI NEMTLSFVPKLVIVLAAMAALSSFMMQEMTDYFASIFEQIRLLK" gene complement(2252771..2253529) /locus_tag="SKA53_11318" CDS complement(2252771..2253529) /locus_tag="SKA53_11318" /note="COG1338 Flagellar biosynthesis pathway, component FliP" /codon_start=1 /transl_table=11 /product="Flagellar transport protein FliP" /db_xref="CDD:11054" /translation="MTSVIVRLFGIIFLCSIPLGGAFAQVGGGLPALNVLVGNDGGTT YSLSLQILALMTVLTILPSFLLGITAFTRIIIILSILRQAMGTQQTPPNQVLISIALF LTFYVMAPTFEEIYSTTISPYLAGELSAVAAIEGSANIMRGFLILNTREAELAMFAEM AGDAPYASNEDVPYAVLLPAFITSELKTAFQIGFLLFLPFLVIDLVIASILMSLGMMM LSPMLVALPFKLLLFVLVDGWAMTIGSIASTYVN" gene complement(2253546..2253827) /locus_tag="SKA53_11323" CDS complement(2253546..2253827) /locus_tag="SKA53_11323" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDNAIFDTSSIVIVIVFLAVLLIARQIIVSKAGDLRQRILPADS SIKLRETQRIDRTTQLSLFQLDGQSVAIVHGPGKAATMVLLQPNGPSGE" gene complement(2253857..2254165) /locus_tag="SKA53_11328" CDS complement(2253857..2254165) /locus_tag="SKA53_11328" /note="COG1886 Flagellar motor switch/type III secretory pathway protein" /codon_start=1 /transl_table=11 /product="Flagellar motor switch FliN protein" /db_xref="CDD:11595" /translation="MKEQKMENQDKDPKGPETDKLRALENIEVEMSVEVGRTEISISE LLRLNEGSVVELDRLAGEPLDILVNGTLIAKGEIVMVGERFGIRFSDIVDPENRVGSI " gene complement(2254181..2255143) /locus_tag="SKA53_11333" CDS complement(2254181..2255143) /locus_tag="SKA53_11333" /note="COG1868 Flagellar motor switch protein" /codon_start=1 /transl_table=11 /product="Flagellar switch protein FliM" /db_xref="CDD:11578" /translation="MSSKKLTQDEVDALMSSVDTSAKAKADVSDSKGIRDFVFGSDDL SLLGDYYALRVINERFARLARTVFQPMLRVQPRITALMPEVKTFDQYCENAPVLMSLT TSRIDELRGSKMMVIQPGFISALTNAYYGGDLGLRYQPRAEFTATETRVIEIITEGLN RTLLAAWQDLMQLTFSDESREENLQFASFVEGSETVIICSFSVQLPKADDARIDILYP LQTLKPIAAQLRSRMQSEVIDDDMTWRERLERAVSEVRLPINVQLSKPRVSLRQLISI TKGDVYPIQLREGLSVMVQGQKMFFADIGEVAGTSAITITQKLD" gene complement(2255158..2255745) /locus_tag="SKA53_11338" CDS complement(2255158..2255745) /locus_tag="SKA53_11338" /note="COG1580 Flagellar basal body-associated protein" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein, FliL" /db_xref="CDD:8705" /translation="MSEEEEPKKKKSGVGKILIFAVVGLVMMGAGLGVGYFLFGTATN TPEQIAAQIIEKNRGAVPEVAEVETEEAADGGPPEKVSKDSLKSEVFETLYYELPGSL TTNLKDSRRFLQIGVGLSTQYDEAILENVESNLPAIRAAILATLSDYGEEDVVGREAR TALSDDLKATINATLEELEGFGGVEGVLLTSFVMQ" gene complement(2255768..2257771) /locus_tag="SKA53_11343" CDS complement(2255768..2257771) /locus_tag="SKA53_11343" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIASLITNDIGVAGATDWLAKTGLDSNKTGVSTVEPSFVQIMTS LENGTAPIPLQMDMASQGLEQQPTPQDIGALDLAVTDEDSAQFLLAMVASLGSGKAVL GPPIVEPAAGITTVLATNGDVAVDELPVTLALDLDAALALVAPPSDLWGVAQIDQVQV EPVDPSLTNNQEITFLPVVTVGPNLDSQQLALPLGAVALPLGAVALPLGALALPVTAL TAMLPESDLALLAAVDGGLGANVVPVVNGKLSVLDGTVDVPFTSMTDRSIFEIVKIVT PDAGNLTGEQMPHDVTYQVVGVGAGMGRDTLSYPVVTADEGTNVTPLRPLVVQGDVLN PVVKVASGPTGVATVLTAVVTDADPQVVPAPAPVQAQVSATKPPVDTNGMPSQTAPAG DAAGDLHDNAIPQQQAARAVPATPANGAASMHATGKNDGPGVAQTDRAPVIAPDQVTS AIQMSKTAQLALGAATDAVQQVTVPRQPLPPTLGPDPVLAAATQIDFASGGSGSASQG GSGQTGSGVAGQGAASLQGQLEAALDVRQQGWTKTLVNRAINAAQAGGSLTIKILPAH LGQITLKLSEGKRGTDLRIIADVPATASMLRDVQDQLSSAFENAGLTLGTYSASTGNN GGEGSQKDGYTDEVTPSELTNDTAQSADDVAGADNLSRINILL" gene complement(2257861..2258280) /locus_tag="SKA53_11348" CDS complement(2257861..2258280) /locus_tag="SKA53_11348" /note="COG1196 Chromosome segregation ATPases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVERKAKMLRNIALKEHARMPVLIKRQHVLQDEISQLTDLVARI ADLQTQGRRQGDLDPRQLQSDHWYELQLVDERELLQNKLEFLQVELRDLTMAINRMSH KKRVVSNKADEVERQVSEDREAQQDAAHDFTRTTRQV" gene complement(2258283..2259617) /locus_tag="SKA53_11353" CDS complement(2258283..2259617) /locus_tag="SKA53_11353" /note="COG1157 Flagellar biosynthesis/type III secretory pathway ATPase" /codon_start=1 /transl_table=11 /product="FliI, Flagellum-specific ATPase" /db_xref="CDD:10876" /translation="MLNFTDQITGPLRQDRRAATQGPILSGRVSRYDGLLLECDGFPV CVGSVCSVQTTDGHAVLGEVIGFNEGRNKLVLYQSGAAVQAGARVALIDEGTMVDVGD SYLGRTVDGLGWPLDDAPAPQVSAQAPLNGTLVNPLARRQIPGPLDVGVRAVNGLLTI GCGQRIGIIAGSGVGKSVLLGMMARYTSADVVVIGLIGERAREVGEMVRAIMQPATRG KVSIIAVPADRSPLLRIRGARRATALAEHFRDQGKNVLLIMDSLTRVAHAQREIGLAL GEAPTSKGYPASVISMIPNLIERAGMGVGPNAGSITGIYTVLADGDDSNDPVVDTARA ILDGHIVLSRSIAQMGVYPAIDIPASISRVMNDIVPLSQQKAARKFKRLVSLYNENRD LMLMGGYVSGQDADLDQAVALWPKLVDYISQSPDDQAELSKSSSQLISIVGQ" gene complement(2259617..2260501) /locus_tag="SKA53_11358" CDS complement(2259617..2260501) /locus_tag="SKA53_11358" /note="COG1317 Flagellar biosynthesis/type III secretory pathway protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11033" /translation="MKDRFLPMKATDPARDPDQLNLAELLSKHKDPAFALVASASRQS DQTFRPLSWAQIAIKIPVETALADEDSLAPIAASAMGTDLPEEPLLSGDDLPEEAPPP QAEAPAHPIEQAPEPRHPAAPPVDEKMLQRIRDDAYAEGLSTGKAITQSEREAELAAQ FTQLQELTVSLGSEQVFDMDVVARSIEDAVLTLASERIGVALTDMPEPLLLRLDTLLD NLAHLLGTREVFVCPEDVPLLQKCLDTHPNPPLIYLRGDPTMQRGDARLRVGGAEVSD LLRDRATSLLRKTGADLV" gene complement(2260501..2261541) /locus_tag="SKA53_11363" CDS complement(2260501..2261541) /locus_tag="SKA53_11363" /note="COG1536 Flagellar motor switch protein" /codon_start=1 /transl_table=11 /product="Probable flagellar motor switch protein FliG" /db_xref="CDD:11250" /translation="MDGAKSVELTATEITERLSGTQKSAILMMLLGEEEAAEILKNLS PKEVQHLGGAMYSVRNTDQETVNAVLDEFLAIIKKQTSLGLGAGNYIRNVLNRALGED KAQSVLSRITPASSERPIEILDWMDGRSIAELLQDEHPQIIALIISYLDYSQASDVLN LLPEDLQPEIVQRIATLETVDPEALRELELVMQMKFKANTSLRSTKVGGVKAAAKIMN FTKANMEKRILGAIRRNDKDLMQAIQDNMFTFDNLGMSDDRSLQTLLRMVEPEDLIMA LKGATVELQEKLFGCMSTRAASNIKDEMEVLGPVRLTEVQTAQKQIIEVARKMSDEGT IVLAGRGGDEMV" gene complement(2261557..2263407) /locus_tag="SKA53_11368" CDS complement(2261557..2263407) /locus_tag="SKA53_11368" /note="COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein" /codon_start=1 /transl_table=11 /product="Flagellar FliF M-ring protein" /db_xref="CDD:11477" /translation="MTDSSTNLSTASSRTGVMQRTSYAMGELRTFYMQPAVQRAFPVI AAALLVVLGLILYLILQAPQRTTLFAALPEAEKAAVMDALRNNGTDVQIDPVTGDITV PTGEFYNSRMSLAAQGLPQSMPDGYSVLTDMPMGTSRSVESMRLKQSQEVELARSINE IDVVSASRVHLAIPERSAFARNAQNPTASVFVQVMPGRSLSEQQVMAIVNLVSSSVAN LPKTSVTVVNQNGQLLSDTVNDPATDLADRQLEYQLRLENIYRTRIESLLTPIVGPGN VSAQVSLDIDFTRTERTEDMVIPDQSALLSEQVAVEEEVAEASQGIPGTVGNTPPPRP ELEQPAGAADGQAPAEAGATAEAGANTVAEIYAPVDRNTGPGQPRLRSSDSTMRNYEV SRTVTSENSPMTRINGVHVAVLLRETLPVAPTEDGDAVAAPAIGLDPSRLDEVKSLVS RTVGIDESRGDTLIVSSLPFISPEAVISSLSGSTELVWHEDPWIREMMRNALMVIVLA VVTLGLIKPLLTQFLASSGESGGYGNVITTEDGEIIDMDVIEMEEGQTLEEIKAKLKP KKSTISAEMLDTANSYDDKVALIRMIVADEAGRVSNVFKALMEDDLDQVG" gene complement(2263453..2263794) /locus_tag="SKA53_11373" CDS complement(2263453..2263794) /locus_tag="SKA53_11373" /note="COG1677 Flagellar hook-basal body protein" /codon_start=1 /transl_table=11 /product="flagellar protein FliE" /db_xref="CDD:17090" /translation="MKALEQISNVSSTTVNAALSRAADMAERAAGGGMVGRSNDGSSF ADLMSDSLDNVARSQNDAAQLVKDYETGKETDLTKVMVAQQVSSLSFQMALNVRNKAL SAYKDIMNMPV" gene complement(2263817..2264872) /locus_tag="SKA53_11378" CDS complement(2263817..2264872) /locus_tag="SKA53_11378" /note="COG0133 Tryptophan synthase beta chain" /codon_start=1 /transl_table=11 /product="Torf protein" /db_xref="CDD:11911" /translation="MGCDHEGKCSTDFLILSAQRAAELGGQSGVIELAKSVGAKSVLI ADTRAAAYGITTSLGGRIVNLSLPKDMARDDARQFIVTLLHGTGRALVRSDGSRRLYD LARRVAKSDVSVFINGPSGSGKEVMARFMHLQSARKDKEFIAINCAAIPDNMLEAMMF GHEKGAFTGASTSNVGVIRAADGGTLLLDEISEMSLQLQAKLLRAIQELTVTPVGGTK AIKVDVRIFATTNRNMSDECRMGRFREDLFYRLNVFPIQTQSLRERPEDIGAIAYELV MRHVKDVTQAPLLSPDALDLLTAHHWPGNVRELENVIQRALVLKDGPVITADAIMIDQ SSIMDIQSQTATAQAVN" gene 2264894..2265022 /locus_tag="SKA53_11383" CDS 2264894..2265022 /locus_tag="SKA53_11383" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQNEILQYLGAQVESDLINNYPVYDLHHEMRKASAMPILARR" gene 2265560..2266453 /locus_tag="SKA53_11388" CDS 2265560..2266453 /locus_tag="SKA53_11388" /note="COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /codon_start=1 /transl_table=11 /product="sigma54 specific transcriptional regulator, fis family" /db_xref="CDD:11911" /translation="MLEAELFGHEKGSFTGAATRRVGRFEEAAGGTLFLDEIGDLPLE LQGKLLRAIEARAVSRIGSNTEQPIDFRLVCATHQNIGDKVDKGEFRQDLMYRISVVM LQVPSLQDRISDLPELVRSISDGLETDGSGLVPPKVSSDGLEEMMAYAWPGNIRELRN FFQRAAVLSTGVPIDRNVVRKLLHLPLDRLAEQKALWTAIDQMPDDDELIIADPVAAP LESADQSMISMLNGDDQFNLQGHLSAQEAKFIELAMELCNYNTAKAAKRLSLKRTTLI AKMRKYGISSDLPSENSYNLN" gene complement(2266538..2266939) /locus_tag="SKA53_11393" CDS complement(2266538..2266939) /locus_tag="SKA53_11393" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKETINVIQVSVQSAEVTLVGHDAIPALVANCSLMNIARGNMVL TLKPTDVDKVGAIGVVEIEKNRPVMLARASVSVAQFNLVLNCLQHIPPRPVTLILALQ DSLTLTSDGYLDANGQDRKFISDLSWSIPIL" gene complement(2266964..2267683) /locus_tag="SKA53_11398" CDS complement(2266964..2267683) /locus_tag="SKA53_11398" /note="COG1191 DNA-directed RNA polymerase specialized sigma subunit" /codon_start=1 /transl_table=11 /product="sigma factor FliA (Sigma-28 group, flagellar)" /db_xref="CDD:10909" /translation="MQEYPSAKLNVEKLVREHEALVRRVSHHIHSRVRSIVEFDDLLQ VGLIGLIEAAQRYTRREGVSFENYAVLRVRGAIYDYLRKNSNLGRKTIATTKVVKFAQ AELSQKLGRAPTRVELAEAVSMTIGELNAWEQSLNSSYQNSLQDEYDEYSMWFSAEEP PAEQLLDRGRLKDALLIALKSLPQREALVLQLYYVEELNIYEIAAILEVTPGRVSQLK SMAFKKMQPLLRDFAEGMGGA" gene complement(2267697..2268419) /locus_tag="SKA53_11403" CDS complement(2267697..2268419) /locus_tag="SKA53_11403" /note="COG0455 ATPases involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="flagellar synthesis regulator" /db_xref="CDD:10328" /translation="MSTRLQDGYGPTLLVDSDLLMANSHVLLNTRPTVDLIDVLEGRC DWRDAVQKLPNGLSLLPGRTAANVLVESDAERLKDLLNTLKTTAHDFAYIIVDVPAGS GTGVMNTVSVADHTMVVLLGQATSFVDAYALIKNAYFEKNVTSFSAVVNMAKSAEQAK MIFDNFERTVSSFLPVKLVYAGYMPKMSEINASSVHGRSIDRDVMKARIYPKIDSILA ALFAGGAGYTGPDAVTFHSPVP" gene complement(2268580..2269083) /locus_tag="SKA53_11408" CDS complement(2268580..2269083) /locus_tag="SKA53_11408" /note="COG3108 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="Tat (twin-arginine translocation) pathway signal sequence domainprotein" /db_xref="CDD:24824" /translation="MVESEKPGPRIVTGRPSLPFVARLHNANTGERLFLDVPASLDLG WIQRRRLNHFMRDWRQDQVKVMDPSVVQDFLEICRAFATPGNPTDVKVNSGYRSQRTN ELLRQRSRNVAINSLHMEGRAIDFALPKVSQRQLGATANAICRGGVGTYSTFIHIDSG RNRHWSA" gene complement(2269309..2270130) /locus_tag="SKA53_11413" CDS complement(2269309..2270130) /locus_tag="SKA53_11413" /note="COG4786 Flagellar basal body rod protein" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgG" /db_xref="CDD:13922" /translation="MFGTIKSGMATSMFEIAVVSNNVANSGTTAFRKSNTSFSDLYSG GSADSVARLSKGVGSIVDGTKQSTEQGGLLTRDGVLNLALIGKGMFVSAAPSATAGAI GTISYTRDGEFSLDKDGQLRTSTNDFVMGYGPGVTPAEATPLVNLKVPVKKDGDGGAQ LTALEIGTDGKLMATYGSAPAELLGTIAIASFPNEIALRQIGMNRFLATDGAGTPKIG VGGQDGFGMIQSGTLETSNVDLTIELTDMIRAQQQFSGSSRILQTYSDMIEKLTR" gene complement(2270187..2271416) /locus_tag="SKA53_11418" CDS complement(2270187..2271416) /locus_tag="SKA53_11418" /note="COG1344 Flagellin and related hook-associated proteins" /codon_start=1 /transl_table=11 /product="flagellar hook-associated protein 3 FlgL" /db_xref="CDD:11060" /translation="MLTRFSQVNKEIELRQTKISTGREITEASEKPIEAVKLSALEQS LTQLKGFQRNTTTAQQRLSLGDTVLASVDGIMAQLRERAISANTDTVSASDLAAIRVD VAQSREALIDLANSRTSDDQALFGGYATDIQPFTPDTNGRIQYRGDGGQHTLAASETT RLPTSVNGAEVFMQVDTSDGVASIFDIVDSFEAALLTDGSYASTLSADAGDELSLSFN GDRVPRDVSFDLQGPSGSTSITATDVVGGSHDQLKSAINKKSDETGVIATVVGGHLVL SAATGTIALSALKIEGVELASREPRFTIMADGEPPQTMVPTAQTLDAQLEKLVQAGQD IAVSRTKIGARLKRAEDQEAALQSRALALETDVNELGSADLGKVVTELQALLVSRDAA MQAYSRIGQSSLFDFLK" gene complement(2271458..2275723) /locus_tag="SKA53_11423" CDS complement(2271458..2275723) /locus_tag="SKA53_11423" /note="COG1256 Flagellar hook-associated protein" /codon_start=1 /transl_table=11 /product="FlgK flagellar hook-associated protein 1" /db_xref="CDD:10973" /translation="MASLLDIGRSAVQAQREALNVTGQNIVNANTEGYRRRDATLTEV YGIQSELTGLSSQTGLGVKLGEIRRAYDGFLTESKRSATARFEASDAFVGKLEQLENL ILPNDGDLGVVMTAFFDNLTQVAASPGDPAPREAALEMGETVANAFNTTAGMLTSLMN GTAEEIGVELVDVNRTLQSLGIINGQLRSSNIGSAPPHNLLDERDRLLDSLAEKIPVN IKIGERLDAELRLGASDSGPLILTGEDAKKLSVVEGESGSIMFRVGSGQIVSQLETGG LRGLVDAHGTNRRALSELDALARDFSQKLNDQHAQGIDLDGQLGRELFAVVDFSVTAG ASNQGDAQATIRLVPGLADRLGALQMTFDGRRGQWQLTDDTGARLGAGRASLEIDGAV ILVEGTPKDGDTFSITPMSGEASRISFLLTRGEEIAAASTIAIYPTTTNKGSAVLTST QEALPGSGVPALSSVLTNNLSPVAAKDFLRGGVVGSIPRGTESITLASLATQTTATVS AQNDADIGGLILTLRDRDSGSVIEYSFSPDSDTDPSGAWASGEEFAKYLSAGVLRGVS SENSAKVTISELGLSVTGSATGFTFASDGARELEAISAVSAGGNALLTGITSGKPASD IRIFTREGRQVSGTPLAAAEVAQLLTTENGFNASAEYRSDYNAVSGSSSYRGMSVVQR SSGADPLASGLQSKMVSLTGLSGPAGGTISSNPAANSTTAQTITLEMYTGTTGTLSIP AGVDAAYVAQEANKAFAPVGVSAVARTAIRLSLDGVGSGTTQFDLKGVNDTALKITAQ INDGDLSELVQAVNRRSDETGVTAELSVSGNAVTLVQRDGFDVVTTNISSGVALRASS LDQMYNPLASEDFTADLRFSGTIAFTSGSGFALKTSGGKPLVSVADPMKGGLASQEHS NGGTLAALSYAVDSRIDGLSQNVDGTRIHAPSARFETVLTAAYGTLLMEFTADVSANE LSAGIMTGESVAQLTAQKLRAQAPIPSLEGDALISTSNPPIGASARFVLAGAEYTLTR VDNRLTALDFEMTGPEAGRILPRVIKTNEGFSLSLIVADGQLAGAGPRPVTDSGAEAF GLSDTQLTQSLQGRSFDATDGTYQINVTVGGVAKTVILQAKDGKLTQSDPKPDELSVD ITGGDDEPTSITLTSALGLAVTPSVDAAALGFKLANAELSVENGRLLARSTDETVVDI KARGTSAAGIYLHLDDLPDEELIVVMGSDGARRLSAEFKIGEPLTAKTRGPEQFRIEM MDDASGRVELFDMVSGASIATRMSSGLARFNVTGQTLELAGFADTGDSFQFATGQRSS GDSRNLDELIKLGEQGSGRRTFQDNFRSIAAGVGSSLEAGRLTRASNEAVRDAAVASE SELSGVNLDEEAAKLMAQQQAYQAAARILQTARELFDTLIRIA" gene complement(2275724..2276062) /locus_tag="SKA53_11428" CDS complement(2275724..2276062) /locus_tag="SKA53_11428" /note="COG3951 Rod binding protein" /codon_start=1 /transl_table=11 /product="mannosyl-glycoprotein endo-beta-N-acetylglucosamidase" /db_xref="CDD:13257" /translation="MNPISPSAFNLATDAAFQSEQSMSLNRDSRLETPEQLAAVAEQF EAIFVKAILSSARSAELSDPLLNSEGQKTFTQMLDAEYAGALAQRESLGIADAIVRQF QNRVRNGDAV" gene complement(2276099..2277181) /locus_tag="SKA53_11433" CDS complement(2276099..2277181) /locus_tag="SKA53_11433" /note="COG1706 Flagellar basal-body P-ring protein" /codon_start=1 /transl_table=11 /product="flagellar P-ring protein" /db_xref="CDD:4681" /translation="MLSSIAQADRVKDIAALAGVRSNQLVGYGLVVGLSGTGDGDLGI TLQSLQSMVSRFGMVTELEGLDGTNAAAVIVTADLPAFIKPGQTLDVTVSTLGPSESL RGGTLLLTPLLGVDGETYALAQGNLVVGGLGVSGEDGSSLTVNVPTVGRVPQGATVER LVENEFITNEYMVLNLHRPDFSTASNVAEAINVVFGGGTAVPIDASSIRVQAPSDPEQ KVSFASLIEQVEVQPGAPPAQVIVNSRTGTVVIGGNVNVTPAVITHGSLTVRIREDPQ AVPQSETIVADGVVINTPAAPVVTPDSAITVDEQGARAFLFDPGVSLSDVVDSINAIG ATPSDLVAILEALRVSGALRAQLIII" gene complement(2277242..2277889) /locus_tag="SKA53_11438" CDS complement(2277242..2277889) /locus_tag="SKA53_11438" /note="COG2063 Flagellar basal body L-ring protein" /codon_start=1 /transl_table=11 /product="Flagellar L-ring protein" /db_xref="CDD:11771" /translation="MFIFRVLTPFALSILAGCSTYVEDEASAQFQPVLPDSTYNSGPS NGSIYHPGVSGLFAVEQRASKVGDVLTVALNESFQATKSQTATADKSDTTTANLPRFI SPNDPEFGMTQSFAGSGAAEQSNTFTGLVTVSVVRVFPNGNLQILGQKKLTLNSGDEY VRVSGIVRRSDISPANIVSSNRLANAEITYTGAGDIADTAKRGLFSRAVSSLNLI" gene complement(2277900..2278685) /locus_tag="SKA53_11443" CDS complement(2277900..2278685) /locus_tag="SKA53_11443" /note="COG4786 Flagellar basal body rod protein" /codon_start=1 /transl_table=11 /product="Flagellar distal rod protein" /db_xref="CDD:13922" /translation="MTNAMHVAKTGLNAQQTRMQVIANNLANLNTVGFKSDRVNFESL LYQVKRSGGDQTSEGTALTSALALGTGVRAVNTQKLYTQGGMVNTDNSFDLAIEGQGF FQVLMPDGRVGYTRNGSFSRSADGTMTTASGYVVQPEIRIPADATEVNISQDGLVSVR QAGEEEAQEVGQLTIASFANPRGLQPIGESFVTQTLASGAPTVAAPQAQGLGKLMQGA LEGSNVNVVQQLVEMIETQRAYEVSSKAISSSDEMMRYISNNL" gene complement(2278755..2279516) /locus_tag="SKA53_11448" CDS complement(2278755..2279516) /locus_tag="SKA53_11448" /note="COG4787 Flagellar basal body rod protein" /codon_start=1 /transl_table=11 /product="flagellar proximal rod protein FlgF" /db_xref="CDD:13922" /translation="MDRNIHIALNNLRNISSELRVNAQNMANANVPGFRADLSVTREA SFLTPFDQFRSRVYSQEASQSLFSTDEGGLQNTEAEMDLAIQGQGYFYIAPSSGGDTA LSRRGDLSFDLDRFVVDGAGNKLLDVALNPIQLPPTRRIVVEETGQIQMELLDAPEGT FVAGPIIATSQADDVVLSKSPDGHIRPVGQADLPEPDQRARLTQGFLENSNVDTIGSL IQNIESQRQFEMSVKFIALAQEIDEGGTRIMRLPG" gene complement(2279574..2284910) /locus_tag="SKA53_11453" CDS complement(2279574..2284910) /locus_tag="SKA53_11453" /note="COG1749 Flagellar hook protein FlgE" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11460" /translation="MSFYTALTGLNGAQSDISATSNNIANVGTTGFKRSRAEFGDIFA TSPLQNSSSSIGSGAILKGVKQQFTQGNIASSLNALDMAISGQGFFALKPSQTSTQVV YTRNGSFNVDNNRNVVDSSGQFLLAYPVNEDGSVTAKDIDSAAPLRLPVTSGDPKATS LVDLAVNVPASADVVTEKEKFTDGYTFDPNDSESFTNSTSFTIFDDLGNPTIATVYFI KTQRATAEDPTNKFETRLVINNQVVPPDLVPAVTRSNEQIFIDRFGNQTTSVPDASYT LEQKSSPLYKLDEQNDRAPSQPAILTGQASGFNFGDEGTGEIEIVTDPLQFGATYEAN PNSNQGVYWGRDFLLVNIDDGTRPVSIDVRAGRYNAEQLAAEVERAINQAHDDGRKIE IQKGADDKISIQLFQPGASGAVPVRALPLDINLLEPSYISLQNKMDLTVSTSPNFSLD VFLAHAQVRLNETLNGSPEFVPGASEKQFAQFTGSTIAVPPTDPEAFSFDYTTRDLGI ATVTSLSAKWEVLYNSGKFEVSDKNESVDAAKEAGTVTITFSDASLNPLTVTIDGFTS QTAVLDAIELKLGGASYFSDKLKVNRTYTSETTLAAVLSAMNLPEASDAPTTQQIDNQ QSVFAGNVRDAAVAVGERMITSVVGALVDGVPTTEQTALQTDALTLAINDALLARNAE FSSTDAVNPTSPTPDEVVAKAAALADAINDALLARNAEFSSTEAADPTSPTPEEVVAK TEALTNLLSGRKNALANSFSITEYTITEIINADGTRSTIPDPTPRDVDDETAALTEAV SVALLARNAEFSSTDAEDPTSPTPDEVVAKAAALAEAVSVALLARNAEFSSTEAADPT SPTPEEVVAKAAALTTARAEAASDLKGLFNYTETPSGEPTNDQITAELNAKTEAGDPT DSFNLAVTAFKNASLAADEFAQLNEDLSQSEVAQDNFANLVTTLSNSQILLADFTDLA TTWSDAEADLSSFLALESTLAAAEADLSTFVDLGTALTAAESAASDFAALVATLTTAE DVASDFDGLVAQLNTVFRDFAVIKERHLAYSNVENRPSVNVYDEKIAVSTSPGSIKLD PQNNSLKIKLGEGDGLRFKEEETILLMGANSDAEALNGRSFRIAAIEGDVIEIVTAGL GLSENPIEIPGVEENPSPYYILAERSTDVEAYFEGAALEVEGSAKSFNNQKILMRETD SARHGYTNDQINAAFDVGIFGDFTGNVIGSNATAEKLGLDLPILTNTAMAWVDELNAP IKVAYDSATQSIVFKVDHTALGPGGAISNLSEIQITSGNAGVNSFGLAGSSSPRIEIT SATSVNGQSFVFDGADDGVGPARFGAKVSYDRESRAFSFKSGTTGEAIDEDKALGVPT KQSASNIQVGRYEIDKVTKSARIQPGAINLASRGLALGTNDLMGVGAKSAVVFEEGKG LKSLPARAIGGAATDPLNSNPVFLNPANRETTFNISVNGINAVIDIPGGNYIGSTLAE RLQERINQMQDPVTGRTIGGVTVRYQPDDNNFVFTTGTTGTESTIRVRGPAKLGLDDV PLGIGSVPTIANLVQATNENGVPLFVNENGEIVDSEPNNLVEGYYPLYLNEGELTFDK TGRLISPQGLTRYEAQTETFSISLDIDYSASSQLATPFVVNNLEQNGFTSGRLDGLSI DATGLLRANYTNGQNKPLGKIVMANFNNQNGLKQVGNATFVQTAESGDPIIGEAGTEG FGSIQSGALERSNVDITEELVNLITAQRNFQAASKAIETSTQLTQTIINIRT" gene complement(2284945..2285646) /locus_tag="SKA53_11458" CDS complement(2284945..2285646) /locus_tag="SKA53_11458" /note="COG1843 Flagellar hook capping protein" /codon_start=1 /transl_table=11 /product="Flagellar scaffolding protein FlgD" /db_xref="CDD:11553" /translation="MDVDNKSLAAQNALLSKLGISTTQDKNAVPKEELGQTDFLKLMT AQLQNQDPFAPMDNGDFIAQMAQFSSVAGISKMSETMSGIADQMGQFRVASSVNYLGH SVMIPGNLARADDNGEIHGAIELERASVDTRIEFLDAMTGESLHTMDMGGQASGLSGF AWTDVPEQYRDGSRRVRLDVLVNYGDGEGVQSLTPNVYAQVIGTANAATNGDGMLETE DYGDVSAAEVLRFRL" gene complement(2285660..2286079) /locus_tag="SKA53_11463" CDS complement(2285660..2286079) /locus_tag="SKA53_11463" /note="COG1558 Flagellar basal body rod protein" /codon_start=1 /transl_table=11 /product="flagellar basal-body rod protein FlgC" /db_xref="CDD:11271" /translation="MADIKNVFDIAGRSMAAQMVRLNTVASNIANANTRSGSAEQTFR PLRPVFQTAFEGGIRNAERATVDVKEIVALDREAQRVHEPGHPLADEEGFVYMPPVDM NEELVDMLEASRQYQNNLEVLTTMRTLMLRTVDMGKS" gene complement(2286079..2286396) /locus_tag="SKA53_11468" CDS complement(2286079..2286396) /locus_tag="SKA53_11468" /note="COG1815 Flagellar basal body protein" /codon_start=1 /transl_table=11 /product="Flagellar proximal rod protein FlgB" /db_xref="CDD:11525" /translation="MLASNIANAGTPGYKARDIDFDRELARQAGDSPIRKNDGRHIDN LAGTSGVDVQYRVPLNPSLDGNTVELSVEQMEFSENSLRYMTTLSFLNRRISGLMTAI KGE" gene 2286525..2287238 /locus_tag="SKA53_11473" CDS 2286525..2287238 /locus_tag="SKA53_11473" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAETKMVEKSSKPRRAAPKPGSASVSEESGKPLSAKAPTARKPE NRRKRLTIQERIMEHLAEVPALLAVSTLSQMLRDTAHLPTRLAIQRARIDVLRARTIA CRLGKPADSAITLAALLNRNAKVEVAPVEAPVPPKEEEQAAQTAAPEPILSPDAQQDM RIELTEAHIHQGIQLPKGAILVVNGAIGLSLIEMEVAKPAIEDAPEEDVSGVVADGAE TDQNEDKTEDLDEQNKAES" gene 2287296..2287640 /locus_tag="SKA53_11478" CDS 2287296..2287640 /locus_tag="SKA53_11478" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPLSMTFPLTASLLLFAGLADCQALTRFTQESYDCTMTAAPLGR IVFTKMSKGAAGVIEGASPDKIIITAISDTQIDGEWGGELVQIQRESGRVRFTRDAIV SSYACKAARFRM" gene 2287706..2289355 /locus_tag="SKA53_11483" CDS 2287706..2289355 /locus_tag="SKA53_11483" /note="COG1345 Flagellar capping protein" /codon_start=1 /transl_table=11 /product="possible flagellar hook-associated protein 2 (filament cap protein)" /db_xref="CDD:11061" /translation="MAEIKPDILSAVSRGGSGIEIKQLVTSLVAAETSGERSLNQRRL DSTSTTISAMGQLSQQVGTFKDGMAAVAQAASRQASSSTSAVTFEVSNAALASDVSAS VSVQRLATEQILSFSFDASVTPTSAVNQGTVSLNTAAGDSASSFTIDSSNNTLSDLTE QLNAIDGVTASLLDTGTGYALIVKSKVGENNALDADSITAIKTALKMTSDADEGVTDA TNNPLGAGSTLVAAQDALLLVDGVTVTRSENSFDDLFVGHKVTLNAVGTSTLASADSS TSVQERINSFLTIANELKSYLTQATQRGLNGAEPGPLAGDVAAQSVLSRMRNIATQPI TGFGDEPIYLAQIGIQTERDGTLTLNAERFERAIAENPDIVDALFSTKYSSEDPNLEV TGLSFAPPKVGSYALVYDPSTSPATATLDGQALSVGTNDDGDVVLRATDGDAYGLQLT LGSNESLTTTVRYGQSMADQLESYGETLLGATGLIARRETELSDNLAGFETNLEDIET KAAALTERYNIRFGRMEAVITSMNKTGEYMQSLMDAWNADR" gene complement(2289454..2289526) /locus_tag="SKA53_t13346" tRNA complement(2289454..2289526) /locus_tag="SKA53_t13346" /product="tRNA-Thr" gene complement(2289571..2291010) /locus_tag="SKA53_11488" CDS complement(2289571..2291010) /locus_tag="SKA53_11488" /note="COG3071 Uncharacterized enzyme of heme biosynthesis" /codon_start=1 /transl_table=11 /product="HemY domain protein" /db_xref="CDD:13211" /translation="MIWSLIKITAFILTVTALTYGAAMLYDVDGGATIAVMGIEFTLR TLDMVVALVALVVLVWLGLRLLALLAASYHFLNGDETAISRYFDRNRERKGYEALAEG MMALASGEGHLAMTKAARAEKYLHQPQLTNLLTAQAAEMTGDRRKAEETYKKLLADDR TRFVGVRGIMKQKLAEGDTDLALKLAQKAFALKPKHAETQDVLLQLQADKADWKGARQ TLGAKLKSGTLPRDVHKRRDAVLALSEARDILDEGNPIEAREAAIAANRLSPDLIPAA VMAARGYIAQGNARYASRVLVKTWTAQPHPDIATAFAEIVPDETPQARLKRFATLTKA TPDHPEAKMLMAELHVAAEDFPAARRDIADLVETDPTARSLALMAAVERGVGADDAVV RGWLTRALTAPRGPQWICDKCQHIHPQWGPVCGNCAAFDTLSWKRPPAGEVSMPAGTE MLPLIVGSQPVPDETLPDDAETVAKDDAK" gene complement(2291022..2292221) /locus_tag="SKA53_11493" CDS complement(2291022..2292221) /locus_tag="SKA53_11493" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13473" /translation="MIGWEKAKMVKQPAKRPRAAVKPRKASAGEAAPVESAQAVSSGA DQVPPEYHASITPDAPSEMEQPQLAPESAVVPPAPKARGGVLAMFVGGLIAGAVGFAV ASLTTSTAQMDLQAQLTAQDAHIAAIQQQLNGQQSVDLAPLVDGQAELAVQIMGLQDD LTATVAILKDRITALENRPAGESTGDGAAGDTSEFEADVAALRAELSQLTDMARTQLD TARAEAAAIEQNAAAAARAAAGRAALARLQVGVESGAPLGVALADLEDVLGASAPDAL LAVQDGVPTLVALQDSFPDYARAALTTARAEGVAGEDTSGVGAFLRNQFQVRSVNPRD GDDVDAMLSRAQAALRGGLLHDTLAEIVQLPAVARAELSDWLALAEARADAVAAIDML AKSLSEN" gene complement(2292283..2292999) /locus_tag="SKA53_11498" CDS complement(2292283..2292999) /locus_tag="SKA53_11498" /note="COG1587 Uroporphyrinogen-III synthase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11300" /translation="MTPALILTRPAPQAEAFAAEITARWVGPLRTILSPLLQIVPVPI TVDLTQVKGVILTSAHGVAASRAATLPRGLPAWCVGEKTAQLASEAGFDVIAGPGDAT RLADKIISRRPDGPLVHLHGVHTRGGVSERLAAAGIGCIDVIGYDQVAQPLSDAAFEA LQGGAPVILPLFSPRTATILAGQAPFAAPVHVVVMSTAVQNAAAAINLRSLSVAATPD AGAMIAATLKRLRVMAEQGL" gene 2293069..2294151 /locus_tag="SKA53_11503" CDS 2293069..2294151 /locus_tag="SKA53_11503" /note="COG0533 Metal-dependent proteases with possible chaperone activity" /codon_start=1 /transl_table=11 /product="O-sialoglycoprotein endopeptidase, putative" /db_xref="CDD:10404" /translation="MARALTVLGIESSCDDTASAVVRGHDVLASVVYGQTALHADFGG VVPEVAARAHAEKLDHCVEDALSAAGLHLADLDAIAVTAGPGLIGGVLSGVMCAKGLA AATGLPLIGVNHLAGHALTPRLTDQVAYPYLMLLVSGGHCQFLIVAGPDKYRRLGGTI DDAPGEAFDKTARILGLSQPGGPAVETSGIGGDPRAFDLPRPLLNQPGCDMSFSGLKT AMLRARDAVVAAKGGLTRLDQADLSASFQAAIADVLVEKTRRALAIYLAIKPVTPCFA IAGGVAANQVIRGRLMQLCASLDTDFVAPPLALCTDNAAMIAYAGAELLAFGQRDDLT LSARPRWPLDKTAAPMLGSGKKGAKA" gene 2294148..2295110 /locus_tag="SKA53_11508" CDS 2294148..2295110 /locus_tag="SKA53_11508" /note="COG0240 Glycerol-3-phosphate dehydrogenase" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate dehydrogenase (NAD(P)+)" /db_xref="CDD:10115" /translation="MTIGIAGGGAFGTALGVALARDGRDVQVWARDVAAVAQMQANRA NARLPGVTLPDEITISAVLDPLFACDTLLLAIPAQALVPFLQDHSARLAGKVLVACCK GIDLQRMTGPASTIRDLVPDAQAAVLTGPSFAADIARGLPTALTIACADDATGMMLQQ MLSTPTLRLYRTTDIIGAELGGALKNVMAIAAGVTIGAGLGDSARAALITRGFAEMQR LVGQLGGQADTLRGLSGLGDLVLTCTSEQSRNYRFGVALGAGQAFDATTTVEGAATAR ALQQLALDLGIDLPICTVVADLTMGRTDVKTALHALLSRPLKEE" gene 2295111..2295383 /locus_tag="SKA53_11513" CDS 2295111..2295383 /locus_tag="SKA53_11513" /note="COG2350 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:8741" /translation="MRFALLAKDKPGALQTRLDNRDAHLAYVAETGVVEIAGPLLDAE GQMCGSLIILEVADLATAEAWAAADPYAKAGLFGDVTLTGWKKVIG" gene 2295383..2295802 /locus_tag="SKA53_11518" CDS 2295383..2295802 /locus_tag="SKA53_11518" /note="COG2947 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12295" /translation="MAYWLFKSEPDVWGWDQQTAKGAVGEEWGGVRNYQARNNMRAMK TGDLGFFYHSRTGLEIVGIVEVCTESHPDSTTDDPRWDCVDVRAVRPFVKPVSLAQIK ADLRLKDMVLVNNARLSVQPVTDTEWKTICALGGIEP" gene complement(2296168..2297556) /locus_tag="SKA53_11523" CDS complement(2296168..2297556) /locus_tag="SKA53_11523" /EC_number="3.3.1.1" /note="COG0499 S-adenosylhomocysteine hydrolase" /codon_start=1 /transl_table=11 /product="S-adenosyl-L-homocysteine hydrolase" /db_xref="CDD:26362" /translation="MSQDYIVKDIALAAYGRKELDIAETEMPGLMALREEYGAAKPLA GARIVGSLHMTIQTAVLIETLNALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAIKG QTLEEHWDYLDKSFQFPEGANMILDDGGDATLYVLLGARAEAGEEIIPVPESEEEVVI KAQIKKRMAQSPGWFTKTRDAIKGVSEETTTGVHRLYDLHKKGQLPFPAINVNDSVTK SKFDNKYGCKESLVDGIRRATDTMMAGKVAVVCGYGDVGKGSAASLQGAGARVKVTEV DPICALQAAMDGFEVVLLEDVLDSADIFITTTGNRDVIRIEHMREMKDMAIVGNIGHF DNEIQVAALKNHKWTNIKEQVDMIEMPSGNRLILLSEGRLLNLGNATGHPSFVMSASF TNQVLAQIELWTKGEDYQPGVFILPKALDEKVARLHLKRIGVKLTELRKEQADYIGVT VDGPFKPEHYRY" gene 2297700..2298263 /locus_tag="SKA53_11528" CDS 2297700..2298263 /locus_tag="SKA53_11528" /note="COG1896 Predicted hydrolases of HD superfamily" /codon_start=1 /transl_table=11 /product="putative S-adenosyl L-homocystein hydrolase" /db_xref="CDD:11605" /translation="MLSGRRLDLLDPTPMDIEIGDIAHGLAFVARWNGQTKGDFAYTV AEHSLLVTDIFINQNPKAPVRWHLAALLHDAPEYVIGDMISPVKAAVGPGYGALDDRL TAAIHQRFGLPAQLPVQIKRQIKKADKLSAWLEAVQIAGFSRPEADRFFGKQDAALLD RFAIRLRPPMAVRDEYTRRCHDLIKAM" gene 2298345..2300033 /locus_tag="SKA53_11533" CDS 2298345..2300033 /locus_tag="SKA53_11533" /note="COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain" /codon_start=1 /transl_table=11 /product="sensory box-containing diguanylate cyclase, putative" /db_xref="CDD:14131" /translation="MIMIKHLSDRLNAQLLRISPEQLWVRYIFAVTITLALLVTMHSV NQQIIAHSAPIYAAAELEQLQRNQRTVLGAALLVLLAEAVIIFYPAYLAVQTQIRALR DQSMRLLSSKVALQQTNVRLLYLANHDTLTGLPNRANLIAILTERMTRGEAEEQTFLF VGLDGFKSINDSAGHESGDDLLIAVGQALRTCVDGDQIVARIGGDEFAIMTDEAAGPM LRRVMAALSDPFDVKGRRLKVQASIGFLVLDHHRTDPMAVLADATMALQVAKNEGGNR AQEFTPALREAARHAQQLQMEIPDAIRNGELEPWFQPQIRLTDGALHGVEVLARWRHP IRGLITPDRFLPAVERAGMTVEMDLAIWQAAMVQAMKWQTMNIWDPVLSLNAAPATIA DPYLIERFLLVLRNSGLRPEQVIVEVLETTLIDGTSGMAAMNIDSLSECGIALELDDF GTGYASLCRLTQLPLSGIKLDKSLVAPLPDHGADSVVRAILALSAELGLHVVAEGIEE IHQAQHLQDRGCTIGQGYGFARPMPALDFEMWLTLHASQPVTISDDRLVLINEA" gene 2300089..2300700 /locus_tag="SKA53_11538" CDS 2300089..2300700 /locus_tag="SKA53_11538" /note="COG0349 Ribonuclease D" /codon_start=1 /transl_table=11 /product="exonuclease, putative" /db_xref="CDD:10223" /translation="MANFLYHNDLPDGLNLGPVVAIDCETMGLNPHRDRLCLIQMSGG DGDCHLVQVSKGQAGAPNLCAMLTDPAVLKLFHFGRFDIAALLNAFGVVTAPVYCTKI ASKLVRTYTDRHGLKVLLQDMLGIDISKHQQQSDWGAPKLTPAQLDYAASDVLYLHQL KAAFDVLLQREDRTAVAKACFDFLPTRAALDLHGWPETDIFTH" gene 2300700..2301668 /locus_tag="SKA53_11543" CDS 2300700..2301668 /locus_tag="SKA53_11543" /note="COG0794 Predicted sugar phosphate isomerase involved in capsule formation" /codon_start=1 /transl_table=11 /product="arabinose 5-phosphate isomerase" /db_xref="CDD:10662" /translation="MTDPVPFLATARRVILQEADALTALSATLDANFADAVTLLLNAK GRVIVSGMGKSGHIARKIAATFASTGTPAHFVHPAEASHGDLGMMTRGDVVLVLSNSG ETPELADLVAYTRRFGIPMIGVASRAESTLIQQADVGITLPQLGEACGRGIVPTISTT MTLALGDALAIALMEHRAFTPENFRDFHPGGKLGAQLSKVADLMHRDDAIPLVRVDTP MSDVLLVITQKGFGVAAVLGEDDRLVGIVTDGDLRRHMQGLLDHTAGEVMTANPTTVS PHALAEEAVNIMNSRKITCLFALDPANPGKVTGILHIHDCLRAGIV" gene 2301671..2302270 /locus_tag="SKA53_11548" CDS 2301671..2302270 /locus_tag="SKA53_11548" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVGGDNLYSQWVGWAKILLPLCGLALLSMLFLFARGPNDGTKIP LAQVIDLARDEKLSAPEFSGLTDTGAVVVISARSARPLPDRPDTATIDTLRMQMDNPG GSTLYVTGVTGEIDGRARIARFSGLVRLQTSTGYTMETGGLTVTLDTGTAISDGSLEI RAPMGNLTAGQVTFQFDTSNTGHQMLFTDGVRLIYTPQG" gene 2302326..2302787 /locus_tag="SKA53_11553" CDS 2302326..2302787 /locus_tag="SKA53_11553" /note="COG1934 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11642" /translation="MLLALAFSTASAQTQINLGALVVDPSAAIEVTSDALSVDQDTGI AVFEGDVLVIQGDLRLSAQRVEVVYGNDTAEIARLIASGGALLANTQDAAEADTADYD ITTGLLTLTGDVLVTQGGNVISAQSMIVNVTDGTATMQGRVRTMLQQSTNE" gene 2302802..2303545 /locus_tag="SKA53_11558" CDS 2302802..2303545 /locus_tag="SKA53_11558" /note="COG1137 ABC-type (unclassified) transport system, ATPase component" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein" /db_xref="CDD:10857" /translation="MTVKTGDVGLQVISLRKSYRKRPVIRDVSITLGRGEVVALLGPN GSGKTTCFYAIAGLVAPEGGKVIIDGRDVTTLPMYRRAQLGIGYLPQEMSIFRGMSVE DNIMSILEIAVKDRHQRRERLETLLSEFSIEHLRRASAMALSGGERRRVEIARCLAAG PKYVLLDEPFAGVDPIAVAEIRHLVADLKNRGIGVLITDHNVQETLQIVDRAYILHDG KVLMSGTTQDVVQDENVRRVYLGNNFRVN" gene 2303784..2304359 /locus_tag="SKA53_11563" CDS 2303784..2304359 /locus_tag="SKA53_11563" /note="COG1544 Ribosome-associated protein Y (PSrp-1)" /codon_start=1 /transl_table=11 /product="ribosomal subunit interface protein, putative" /db_xref="CDD:11258" /translation="MRYQISGKQIDIGEALQTHVRTEMDAILSKYAGRPTEAYVVFSK SGHEYVCEAVVHLSTGLTAQATGKANEIYAAFDSNAEKMDKQLRRYKRRLKDHHAGRS TPVELSDAGSYILAPSDESEEAGNDTVNAMIIAEMETKIPSLSVGEAVMQMEIANAPV LVFRNEKHSGVNVVYRRDDGNIGWIDPRAAG" gene 2304387..2304851 /locus_tag="SKA53_11568" CDS 2304387..2304851 /locus_tag="SKA53_11568" /note="COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)" /codon_start=1 /transl_table=11 /product="PTS IIA-like nitrogen-regulatory protein PtsN" /db_xref="CDD:11473" /translation="MQLSKILLSNAVKSIASCTSKKRLFHDIGEMAETCYGLKPSAVI DALIERENLGPTGVGHGVALPHARLAGVDDVKGIFLRLEKPLYFDAVDRQPVDLVFAL IAPENAGVDHLKALALVSRTFRDASICAKLRANSDPVTLFTILTSVGSSQAA" gene complement(2304848..2306272) /locus_tag="SKA53_11573" CDS complement(2304848..2306272) /locus_tag="SKA53_11573" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13645" /translation="MTHFDYFIILADMRTGSNFLESNLNAVDGLSCLGEAFNPSFIGY PMQEALFGISLDQREADPQGLLDAIKAADGLCGFRFFHNHDPRVLDICLADPRCAKIV LTRNPLDTYVSLKIAQATGQWKLTNATHAKTQRIRFDADEFTGHLRAIQDFQTILLHR LQTTGQTAFFIGYDDLQDIAVLNGLAAFLGLPARLTNLDRKLKKQNPAPFADKVSNLA EMESALRAIDPFDLSRTPNFEPRKGPAIPTYMAAARTGLIYMPLRSGPQDTVADWFVA LDDAPPITDFSQKSLRQWQNEHALFRRFTVLRHPVARAHVAFCDHILTTGDGHYPHLR ATLRKVHKLPIPEGGPDLDHPSDYDPAAHRAGFLAFLEFLCSNLAGQTSVRVDAAWAS QLTLLQGMAQVALPDVILHEDDIPRALPLLAAQVGRLDAPLPRLVAHRHVHWLEAVYD PVIEATARTAYARDYETFGFTNWR" gene complement(2306269..2307963) /locus_tag="SKA53_11578" CDS complement(2306269..2307963) /locus_tag="SKA53_11578" /codon_start=1 /transl_table=11 /product="core-2/I-branching enzyme family protein" /translation="MTLGIVMLVHTAFDRAEQMIRHWADAGCPVVVHVDRHVAQETHD AFVTAVADLADVSFSRRYRGEWGMWGLIAASQAASRQLLDRYPQIQHVYLASGACLPL RPVNELKTYLAARPDTDFIESVTTGDVQWTVGGLDRERFTLRFPFSWKRQRRLFDGYV RLQRLLRVRRRIPPGITPHLGSQWWCLTRQTLTAILNDPRRAAFDTYFRQVWIPDECY YQTLARLHTRRLESRSLTLAKFDFQGKPHIFYDDHAELLARSGCFVARKIWPQADALF HRFPSGSQADLEPHTGTIDRIFAQAVDRRTSGRRGLYMQSRFPFMERENGFTAAPYTV LQGFDAIIPDLTSWVTAQTGVVAHGHLFATDKAHFAGGAAVYRGGLSDNAHLRDYNPK MFLTNLVWNGRDRHQCFQFGPADNQAIKWMLARDAHASVWVVTGGWAVSLFCSGKPAS AVRSEAARLQQVESRFISALQSPDARSRRHIMTLAEFLGSPVDVLQAIVDDMAGHRAT ALAQAPVMVNLDGFAVFLQDLKNQGMHPYLAGDFAPVGKVKSLQSQPRKAYVMGKK" gene complement(2307960..2308910) /locus_tag="SKA53_11583" CDS complement(2307960..2308910) /locus_tag="SKA53_11583" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLKARDLTAVQDRTGTIRPDDVLLFCTFRNEDQRLPYFVQYYRD LGIDHFLMVDNDSDDGGRDFLADQPDVSLWQAKAGYGASRHGIDWLTYLQGKYASDHW ALTVDVDEFFVYPFCDSRPIRALADWLDASEVRSFGALLLDMYPKGPVSAEPYRRGDD PFKIACWFDAGNYVMSRNTMLRNLWIQGGPRARMFFADKPRQAPALNKIPFVKWQRPY AYVSSTHMMLPRGLNLVYDQHGGEKTSGVLLHAKFIDTFSTRAVEEAVRAEHYASGRE YKSYDSRQGADPDFWCEWSERYINWRQLEGLGLMSKGNWA" gene complement(2308995..2310029) /locus_tag="SKA53_11588" CDS complement(2308995..2310029) /locus_tag="SKA53_11588" /note="COG0463 Glycosyltransferases involved in cell wall biogenesis" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPAGDLWMAYRMRWKRRRFLFRIWRKRRQITPVQDRTVLIKPDM ILCFVTLRNEMARLPHFLQHYRKLGISHFLIVDNGSDDGTAAYLAAQKDVSLWSTQHS YRLARFGMDWLGWLQWQHGHRHWCLTVDADELLTFPYADSRDLGDLTRHLDARGIMSF GAIMLDMYPKGPIAEVRHDPTKDPLDALAWFDAANYREKIHPVYQNLWIQGGVRDRVF FTARPERAPTLSKVPLVRWHWRHVYVSSTHQMLPRRLNHVFDRADDRRVTGVLLHTKF LPDIMSKSQEELTRRQHFENSSLYADYHQQLAQGPDLWCLQSQRYTGWAQLAALGLMS QGDWDQDDAI" gene complement(2310047..2310850) /locus_tag="SKA53_11593" CDS complement(2310047..2310850) /locus_tag="SKA53_11593" /note="COG1210 UDP-glucose pyrophosphorylase" /codon_start=1 /transl_table=11 /product="UDP-glucose pyrophosphate" /db_xref="CDD:10928" /translation="MTLVDRPLIQYAIDEARAAGIEDFIFVTSRGKSALEDYFDHAPD LENSLRDGGKTELLRILRNTYMDSGAIAYIRQHKPLGLGHAVSCASKLIGNEPFAVIL PDDVIAAEKPCLQQMVEAYQETGGSMVATMEVSAAKTSSYGMLDIAGQSGQIVQVKGL VEKPAAGDAPSNLAVIGRYILAPEVMQSLEQVDRGAGGEIQLTDAIAQEISAGRDVFG YRFDGQRFDCGSKAGFLQATVAFALARDDLRDELAAFLAEIPFTRNAAQ" gene complement(2311031..2311834) /locus_tag="SKA53_11598" CDS complement(2311031..2311834) /locus_tag="SKA53_11598" /EC_number="2.7.7.38" /note="COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase" /codon_start=1 /transl_table=11 /product="3-deoxy-manno-octulosonate cytidylyltransferase" /db_xref="CDD:10930" /translation="MMPVLIVIPARYASTRYPGKPLVSLTGATGVAKSLIRRSWDAAM AVDGVDDVVVATDDGRIADAARGFGAKVVMTSTTCANGTERCAEAVDSLGGDYDIVVN LQGDAPLTPAWFISDLVAGLRAHPQADVATPVLRTEGQMLNALLQDRREGRVGGTTAV FGADHNALYFSKEVIPFTGRSYGPADPTPVFHHVGVYAYRPAALRAYARWQQGPLEQL EGLEQLRFLERGVPMLCVEVAAKGREFWELNNPEDVLKIETMLQQMGQP" gene complement(2311831..2312628) /locus_tag="SKA53_11603" CDS complement(2311831..2312628) /locus_tag="SKA53_11603" /note="COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase" /codon_start=1 /transl_table=11 /product="3'-Phosphadenosine 5'-phosphosulfate 3'-phosphatase" /db_xref="CDD:27903" /translation="MDYELLTSVMRRAALEAGDAIMQVYAAADFDVRAKSDDSPVTAA DLAADAVISAALRAAFPDVALVTEEQAASHMVQATTFFIVDPLDGTKEFVQRRGDFTV NIAYVVDGMPMRGIVYAPARDRLFYTDATGQSVEETAPFAKDAVGNLRAILVSEPDNA ALMVVASKSHRDQATDDYIAKYRVRDMTSAGSSLKFCLVATGEADLYPRLGRTMEWDT AAGHAVLAGAGGLVVRFDDHQPLTYGKPGFDNPFFIAAAPGVVLESA" gene 2312786..2313559 /locus_tag="SKA53_11608" CDS 2312786..2313559 /locus_tag="SKA53_11608" /note="COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein" /db_xref="CDD:7889" /translation="MAVVTYHSTVRNLRSGHRSAVIGLALTTLQSLVMVGVFLLMFTL LGVRTAQIRGDFLLFLMSGIFLYMTHTKTVAAVAGGGNPLGAMMLHAPMNTVISIVAA AVSTLYQQVFAITVILSFYHIVITPITIHDPVGALGMLLLAWFFGIAVGMVFLALNPW IPDFAGLVRALYIRMNMIASGKMFVVNTLPAMTVALFDWNPLFHIIDQSRGHVFLHYT PRVTSVSYPIYVSLALIMIGLMGEFYTRRNVSVSWYAAR" gene complement(2313607..2314653) /locus_tag="SKA53_11613" CDS complement(2313607..2314653) /locus_tag="SKA53_11613" /note="COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTKNLIAAGAILVATMHPVAAQQTAFSDAVNVWLSGDDTNGLPA LAVDARNGDTTAQLILGQVDRDTIPAGYSDFLLGLTREERAALLRFADDDGATVNWLL TLQGTDNAALGDALFWYEANLDPIDSAANLQAVDEKSTAEWVLWRTLNNGYFDRIQSL PAENPELAQVGFMTWLTDYFASENRTISMNRFLDDERPAKVPGLLALKRLERVLGLSG NFSVGLNELIEVIRGRGNRLPVTADLVTLEASLTRLGEVDPRVGVVNRLCDICPDTVA DYQCRIETFEIIGGYETLLAVRSPAEAAVPADVYLASDRAVTSLTNLVRGRAPADLTR VRSSCLQSLIVADQ" gene complement(2314685..2316280) /locus_tag="SKA53_11618" CDS complement(2314685..2316280) /locus_tag="SKA53_11618" /note="COG0226 ABC-type phosphate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="OmpA domain protein" /db_xref="CDD:10101" /translation="MIKQSVLRWPATLALGAGVSLSLATMLAAQDVTLSSLDGELTLR GELLSYDGSVYVLGTVFGALEVDAFLVSCVGDACPDIDTTAESFTIAGAAGLIDGVFG DVITAFSAEVGGAATVTDQSGDTTVISLLDEADRETATITLASVGSTQAIADVIADTA ALAVSTRAVSNNEVNAFADARKGDPTSDAQQTIFALDALVAITSLSNPVRAISESDLA RIFAGEVTNWADVGGPSAQINVYGRSNDSGTAVVFNELVMEPAGLRMADTILRTETDA ALAEAVASDPLGIGVTSLADAGDTKILAVRGVCGIQVQATPFTIKTEEYPLSRRLYAY AGDETAPAQLTRLMQFLETPAAQAVVRDAGYVDLGISFQSNTEQGLRYLASILTDDVE VTLRQLRDMTQLLTAADRSSITFRFALGSSRLDARAQDDILRLANLIATSDISNKELL LIGYTDAIGDGASNLALSQQRAEEVRQALFAVAPSLASDDLPVRALGFGEISPLSCNE TANGRRINRRVEVWLRDVVTESR" gene 2316297..2316509 /locus_tag="SKA53_11623" CDS 2316297..2316509 /locus_tag="SKA53_11623" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNPGKDWNVENASIEPEFGRFCGDKLFVSKQCMMASGTKTCVRH CLHALLTAQNCGFYAFAASTAVAGPI" gene 2316631..2318535 /locus_tag="SKA53_11628" CDS 2316631..2318535 /locus_tag="SKA53_11628" /note="COG0443 Molecular chaperone" /codon_start=1 /transl_table=11 /product="chaperone protein DnaK" /db_xref="CDD:4036" /translation="MAKVIGIDLGTTNSCIAIMDGSKPRVIENAEGARTTPSIVAFTD DERLVGQPAKRQAVTNPENTIFAVKRLIGRRFDDADLAKDKKNMPFTVVDGGNGDAWV QARGDKYSPSQISAFILGKMKETAESYLGEEVTQAVITVPAYFNDAQRQATKDAGKIA GLEVLRIINEPTAAALAYGLDKKESKTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGD TFLGGEDFDMRIVNYLADEFKKENAVDLTKDKMALQRLKEAAEKAKIELSSSSSTEIN QPFISMGSNGQPLHMVMKLTRAKLESLVGDLIKASLKPCQAAIKDAGLSTSDIDEVVL VGGMTRMPKVKEEVSKFFGKEPHQGVNPDEVVAMGAAIQAGVLQGDVKDVVLLDVTPL SLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTLRVFQGEREMAADNKMLG QFNLENIPPAPRGMPQIEVTFDIDANGIVEVGAKDKGTGKEQKITIQASGGLSDDDIE AMVKDAEANAEADKARRELVEAKNQAESLIHSTEKSMEEHADKVDPTTIEAIELAIAA LKDDLEGDNAGKIKSGVQNVTEAAMKLGEAIYKASQEESGDAEPDRPGADDDILDADF EDLDDDKRRN" gene complement(2316742..2318382) /locus_tag="SKA53_11633" CDS complement(2316742..2318382) /locus_tag="SKA53_11633" /codon_start=1 /transl_table=11 /product="putative NAD-specific glutamate dehydrogenase encoded in antisensegene pair with dnaKJ" /translation="MNAGFDLACVVAFQIVLECCNRQFDRFDRGWIDLVGMFFHRFFG RVDQAFGLIFCLDQFAASLVGLGIRLGVFDHCFDVVIRQTARRLDGDFLFFASAFVLG TNLDNAVGVDVECHLDLGHAAGGWWDVFKVELAQHLVVSGHLTFALEHPQGHGILVVF GGREDLRFFRRDRRVAVDQAGEYATQRFDPQRQWCDVQQDHILDVALQNTGLNGGTHG DNLVRVDTLMRFFAKEFGHFFLDLRHAGHAADQNDLVDVGCGQARILDRGLTRFQRCL DQIANKAFQLGTGQFHDHVQRLAVRPHRDEWLVDFGTGGRRQFDLGLFGSFLQTLQGH LVLGQIDGVLFFELVGKVVDDPHVEIFTTKERITVCGFDFEQTVVDFQNGHVESTAAK VIDRDGFAFFLVQTVSQRRGCRFVDDAQHFQPGNFTGVLGGLTLGVVEIGRHGDDGLR HFFAQIAFGGLFHLAQNERGNLAGRIFVATRLHPSVAIATINNGERHVLFVFGKVRIV KATPDQALDGENRVFGVGHGLAFCRLTDKAFVVSKCND" gene 2318608..2319759 /locus_tag="SKA53_11638" CDS 2318608..2319759 /locus_tag="SKA53_11638" /note="COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain" /codon_start=1 /transl_table=11 /product="Chaperone, DnaJ" /db_xref="CDD:10357" /translation="MSKRDYYDVLGIAKGADADAIKKAYRQKAKELHPDRNADNPKAE AQFKEANEAYEVLKDANKKAAYDRYGHAAFENGMGSSAGGPRGGGQGDFASAFSDVFD DLFGDFMGGRGGAGGRRSGAQRGSDLRYNLRINLEDAFAGLQKTITVTTAVSCGSCTG TGAEGGSEPQVCPTCNGMGKVRAQQGFFTVERTCPTCSGMGQIIKDKCKVCHGAGRVE KEKSLSVNIPAGVETGTRIRLSGEGEAGVRGGPAGDLYIFIEVNSHPLFEREGLNLYC RVPVSIATAALGGEIEVPTIDGGRSRVKVPEGSQSGRQMRLRGKGMPALRGGPSGDMM IELTVETPVKLTARQREILREFDKLSEENNPQGSSFFASVKSFWDSMKS" gene 2319869..2320531 /locus_tag="SKA53_11643" CDS 2319869..2320531 /locus_tag="SKA53_11643" /note="COG2003 DNA repair proteins" /codon_start=1 /transl_table=11 /product="DNA repair protein RadC" /db_xref="CDD:11711" /translation="MRDHRKRLRDRFLAGGPAAVPDYELLELVLFRAIPRQDVKPLAR ALIDHFGDFNRVLSASVTQIGQVPGAGPAVALELKIVEAAAHRLARARVMQRHVVSSW DALLTYCHTVMAHRDTEQFRILFLDTKNVLIADEEQAKGTLDHVPVYPREVVKRALEL NAASMILVHNHPSGDPTPSQADITMTRQISDAAGTMGITVHDHLIIGKSCEISLRAQG LF" gene complement(2320568..2323258) /locus_tag="SKA53_11648" CDS complement(2320568..2323258) /locus_tag="SKA53_11648" /note="COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)" /codon_start=1 /transl_table=11 /product="translocase" /db_xref="CDD:10523" /translation="MLGIGSIAKKVFGSANDRKVKSARPLVAQINALEPQFQALSDDD LKAKTNEFRDRALKGESLDALLPEAFANCREAARRALGLWAFDTQLLGGIFLHQGNIA EMKTGEGKTLVATFPAYLNALTGKGVHIVTVNDYLARRDAEWMSKVYGALGMTTGVVV PEQGEADKKAAYACDVTYATNNELGFDYLRDNMKSELDQMYQRYHNFAIVDEVDSILI DEARTPLIISGPAQDRSEMYAAINKVIPDILPEHYTLDEKARQATFTEEGNDFLEERL TALGLLPDGQTLYDPESATLVHHVSQALRAHVLFTREKDYIVRDDQVVLIDEFTGRMM NGRRLSDGLHQAIEAKEGVGIKPENVTLASVTFQNYFRLYDKLGGMTGTAATEADEFR EIYNLGVVEVPTNRPVARADEHDQVYRTAKEKFDGVVAEIKQAHAKGQPILVGTTSIE KSEFLAGLLRAEGITFNVLNARQHEQEAQIVADAGKLNAVTIATNMAGRGTDIQLGGN VEMRVLQALATDPQADPEALRARIEAEVADEKEKVKAAGGLFVLATERHESRRIDNQL RGRSGRQGDPGRSTFFLSLEDDLMRIFGSERLEKVLSGLGMKEGEAIVHPWVNKSLER AQAKVEARNFDIRKQLLKFDDVMNEQRKVVFHQRREIMESADLADVVKDMRDQVIDDL VTIHMPPKSYADQWDAEGLQADVVAHLGLDLPVVGWAAEEGVDDDVMRERLEEAADKY MGEKADAFGAETMRNVEKQILLKTIDEKWREHLLTLEHLRSVVGMRGYAQRDPLNEYK TEGFQLFEKLLDSLRTDVTKKLSQIRPMSKEEQERMIAQFRQQQAAAAAAMVAPAIAA EGARAGFDENDPATWGNLGRNDLCPCGSGKKFKHCHGRLA" gene 2323484..2324296 /locus_tag="SKA53_11653" CDS 2323484..2324296 /locus_tag="SKA53_11653" /note="COG0760 Parvulin-like peptidyl-prolyl isomerase" /codon_start=1 /transl_table=11 /product="PPIC-type PPIASE domain protein" /db_xref="CDD:25575" /translation="MAVSLSITTGAVAQDVTADTVVAKVGDTEITVGELIIARSMLPA QYAQFPDEVLFTGLVDQLVQQQLLADALETTPPSVIYTIQNEQRSLMAAQVIDDITQT SINQELLQEAYQDRFADAPETPEFRAAHLLVATEDEANAAKAQLDAGEAFADVAAAVS TDVTSANGGDLGWFGAGAMVEEFETAVMALEIDEISDPFETQFGWHIVTLTDQRARPA PTFEQVVQQLSAELQEAAVIAYLDELSAATTVERPEEGAFDPSVINQVELLD" gene 2324303..2325517 /gene="argJ" /locus_tag="SKA53_11658" CDS 2324303..2325517 /gene="argJ" /locus_tag="SKA53_11658" /EC_number="2.3.1.35" /note="COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase)" /codon_start=1 /transl_table=11 /product="bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein" /db_xref="CDD:17078" /translation="MKTSPLAPAQFPDLPVIAGVTFASAAAGVKYQNRTDVMLAIATP GSSVAGVFTRSATRSAPVLDCQAKLGGDPAGAAGILVNSGNSNAFTGKNGVASVVALT QAVADLTDVPVGRVFTASTGVIGEPLPHDRIIAKLAELHNGQTEAAIKDAARAIMTTD TFPKGASASVTVGDKTVQIAGIAKGSGMIAPDMATMLVYIFTDALIGQDALQALVSLH NDQTFNCITVDSDTSTSDSLIAVATGASGVDVTGNTEFAAALHGVMLDLAHQVVRDGE GATKFVTVTVTGAVDDTDARKVAMAIANSPLVKTAIAGEDANWGRIVMAVGKSGAQAD RDKLSIRFGDITVAENGWRAPDYSEDAASAYMKNAELVIGVDLGLGSGQSTVWTCDLT HGYIDINADYRS" gene 2325514..2325912 /locus_tag="SKA53_11663" CDS 2325514..2325912 /locus_tag="SKA53_11663" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="mutator mutT protein" /db_xref="CDD:25476" /translation="MKLVLVSAVALIDADGRVLLAQRPEGKSMAGLWEFPGGKVEQGE TPEAALIRELHEELGIGTWASCLAPLTFASHAYPDFHLLMPLFACRKWEGTPQSREGQ ALKWVRPNDLRDYPMPAADIPLIPILRDWL" gene complement(2325989..2328424) /gene="infB" /locus_tag="SKA53_11668" CDS complement(2325989..2328424) /gene="infB" /locus_tag="SKA53_11668" /note="COG0532 Translation initiation factor 2 (IF-2; GTPase)" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-2" /db_xref="CDD:10403" /translation="MKQSFSHGRTKNVVVETKRKRVVVPKPGAAKPAGSTGVQMGGDP SKRPAGISDVELERRMKALAMARARESDEAAKREAEEKERAAEREARRAEMEAKEAED REREERAKAKADEEKRKAERAAAKVKADTAPAGADASALPGENAVDRPSAAGPRKVDR ERDAREKAAKAKPGREDDGRRAGKLTLNDALTGREGGRQRSMAAMKRKQDRARAKAMG GSAEREKVFRDVALPPAITVSELANRMAERVADVVKALMNNGIMATQNQSIDADTAEL IIEEFGHTVVRVSDADVEDVIKQVLDDPKDLISRPPIVTIMGHVDHGKTSLLDAIRHA KVVAGEAGGITQHIGAYQVKTDGGSLLTFLDTPGHAAFTSMRSRGAQVTDIVVLVVAA DDAVMPQTIEAINHAKAAKVPMIVAINKIDKPSANPDKVRTDLLMHEVVVEKMSGDVQ DVEVSALTGKGLDNLLEAIALQAEILELKANPDRPAVGAVIEAQLDVGRGPVATVLIQ NGTLRQGDIFVVGEQYGKVRALINDKGERVAEAGPAVPVEVLGLNGTPEAGDVLNVVA TEAQAREIAEYREKASKEKRAVAGAATTLEQLMANAKANQNVSELPIVVKADVQGSAE AIVQAMEKIGNDEVRVRVLHSGVGAITESDIGLAEASGAPVFGFNVRANATARASANQ KGVEIRYYSVIYDLVDDVKKAASGLLSAEIREKFIGYATIKDVFKVSNVGKVAGCLVT EGVARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVAEVQSGQECGMAFEAYDDVRPGDV IEIFERESVERNL" gene complement(2328478..2329110) /locus_tag="SKA53_11673" CDS complement(2328478..2329110) /locus_tag="SKA53_11673" /note="COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12147" /translation="MTRGGHKDENDDVERKCIVTGEVQPKAGLIRFVIGPDNQVVPDI LGKLPGRGIYVTADRAILEQARKGQFSRSAKQAVTVPDGLLDEVERQIARRTVDLIAL TRKAGRAVCGFEKVKGWLAGGERVRVLVQASDGSERGKTKLWTPEGARYFGCLTSAEL GLAFGRQSVIHGALATGGLSDRVVEEATKLRGLREGNGGDGASGKDKEAR" gene complement(2329132..2330733) /locus_tag="SKA53_11678" CDS complement(2329132..2330733) /locus_tag="SKA53_11678" /note="COG0195 Transcription elongation factor" /codon_start=1 /transl_table=11 /product="transcription elongation factor NusA" /db_xref="CDD:10070" /translation="MAYTSANQLELLQTAEAVAREKNIEPGLVVEAMEESLARAAKSR YGAEMDIRVNIDRKTGRATFTRVRTVVADDAVENYQAEFTVAQAKDYMTDPQIGQEYS EEVPPVELGRIAAQSAKQVILQKVREAERDKQYEEFKDRAGTIINALVKREEYGNVIV DVGSGEAVLRRNEKIGREAYRPNDRIRCYIKEVRREQRGPQIFLSRTAPEFMAELFKM EVPEIYEGVIEIKAVARDPGSRAKIAVISYDSSIDPVGACVGMRGSRVQAVVNELQGE KIDIIPWNEDMPTFLVNALQPAEVTKVVLDEEAGKIEVVVPDEQLSLAIGRRGQNVRL ASMLTGLDIDILTEEEESKRRQAEFETRTKLFMDTLDLDEFFAQLLVAEGFTNLEEVA YVEQDELLVIEGVDEGTAGELQARARDYLEAQAKKAMDAAIATGVEQSLIDFEGLTPQ MLEALGKDGVKTLEDFATCADWELAGGWTTVNGERVKDDGVLEPFDVSLEEAQTMVMT ARVMLGWVDPDELNKDTDETEEEEA" gene complement(2330733..2331308) /locus_tag="SKA53_11683" CDS complement(2330733..2331308) /locus_tag="SKA53_11683" /note="COG0779 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25927" /translation="MNDLIAKAAVDRRIAEIITPVIEDMGFEVVRVRLMTGKESTLQI MVQRPDGTIEVDQCAQISTAISAVLDVEDPIVDVYTLEVSSPGIDRPLTRLKDFDQWK GFEAKIETEELIDGRRRFKGELAGIDGDEVLIDIDEGTIGLKFAWLSDAKLVLTDDLI RDVLRGRKDAGQIDETQFDEIETIIDGEENT" gene complement(2331489..2332961) /locus_tag="SKA53_11688" CDS complement(2331489..2332961) /locus_tag="SKA53_11688" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="peptide ABC transporter, periplasmic peptide-binding protein" /db_xref="CDD:10615" /translation="MPLRAQSRGGKFTAGIGGANTSDSWDGRTHSDLFMIAAALGGVY DALTEVAADGSLQGELATSWEASPDAKVWTFNLRQGVTFHNGKAFGADDVIESLQLHV AEGSKSAAQPLVAAITEMRKITDHQVQFTLEAGNADFPYLLSDYHLLMYPAGQIEESI AKGIGTGLYEVVAFDPGVRFVGRRVADHYKGDSAGFFDEVELIAINDNTARMNALLTG QIDAVNRIDFRLEPLLRANPNVSIQEVTGNQHYTFPMLTQSAPFNDVNVRRALKYGVD RQEMVDKILLGHGKVGNDSPIGPANQYYHAEMEQLAYDPDRAKFHLKQAGLDSLNIDL SASNAAFEGAVDAAQLYQSSAASAGININVIQEPADGYWSNVWLVKPFSASYWSGRST EDWMFSSAYEAGVPWNDSQWDNGRFQELLYSARAELDSDKRREQYYEMQQILRDDGGV IIPMFANFVQAISSRVVTPDVVGNTAQMDNNRMLERWSLA" gene complement(2333080..2334741) /locus_tag="SKA53_11693" CDS complement(2333080..2334741) /locus_tag="SKA53_11693" /note="COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase" /codon_start=1 /transl_table=11 /product="peptide ABC transporter, ATP-binding protein" /db_xref="CDD:10845" /translation="MTQAPDTTPLVKIRDIRIDGRSDETWLPIIKGVNLTLQRGQVLG LIGESGAGKSTLGLAAMGYTRDGVRISGGSVEFDGIDLLTASAAVKRDLLGKRIAYVA QSAAASFNPAHRLIDQHVEAPVQHGIAGRKDSAEDGIALYRKLRLPNPEEIGFRYPHQ VSGGQLQRAMTAMAMSCRPDLIIFDEPTTALDVTTQIEVLSAIRDIVAQYNTAAIYIT HDLAVVAQMADRIKVLLRGEEVETADTRTMLTAPVQDYTKSLWAVRSFERPAKPAVQK GTVPLVTVQNVDAAYGKEKVLHDVSFDIHAGRTVAVVGESGSGKSTTARCITGLLPPI AGQILFDGAPLPPDYRKRSKDQLRQIQMIYQMADTALNPRMSVGQIIARPVQFYLGLT GKAKRQRVDALLNQIELDPAEYYNRLPSELSGGQKQRIGIARALAAEPRFIICDEVTS ALDQLVAEGILRLLARLQDELSLSYMFITHDLATVRAIADEVVVMKDGHVVEQGPKAE MFRPPHHAYTDLLLSSVPEMDPDWLSNLLAERGVDNIGDAAVNKL" gene complement(2334743..2335939) /locus_tag="SKA53_11698" CDS complement(2334743..2335939) /locus_tag="SKA53_11698" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10891" /translation="MIWFAAALVSFAALAWGFRLAGQAATGRAPYFRDMTFGVAYGYI FAVAALAWLVWAYMQGRSPDPAVANKFFFLRIAVEGFVVFAIGAWLFRLLGRNVGTKG TKRLFRSMPLTASFGIMMILIYVFVAVFASFLAPYGQAEIIRGVAANIMPGGDIALGG NPDFPLGTDQIGRDILSRLIYGAQNTVGIAFATTVIAFMLGGSMGFLAATLGGWLDQL LSRIVDVLMAIPSLIFALLLMTIASVWAPRLGIPQTYFMILIIAVIDSTRVYRLSRAV GQSIVVMDYIEAAKLRGEGMGYLMFKEILPNATAPLLAEFGLRFCFVFLTIASLSFLG VGIQPPLADWGTMVRDLGGFVNFAQFAPMVATPPLLAAGAIALLAVAVNFVVDWMLHR SSGLKD" gene complement(2335936..2336928) /locus_tag="SKA53_11703" CDS complement(2335936..2336928) /locus_tag="SKA53_11703" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="peptide ABC transporter, permease protein" /db_xref="CDD:10471" /translation="MGNVLTIILQRLALGFLTLLVVSVVIFVAVNLLPGDFAQSILGQ GATPESVAAIRRDLGLDQPMVARYFSWLGGALQGDFGSSFAQASFANFTGSDSGAGSV AQQIAPRFANTMFLAAVSAAIAVPFALVLGVLAALYRNSIFDRATNIFTLSSISSPEF FLAYVLILFLAVLNPILPSVSNIFADMAFSDRLEKTLLPALTLTLVVTAHMMRMTRAA IINLLSSPYIEMARLKGMSPLRVIVHHALPNALAPIINVVAINLAYLITGVVVVEVVF VYPGIGQLFVDSVKFRDIPVVQACCLIFAAAYILLNLTADIMSILSNPRLRHPK" gene complement(2336987..2337982) /locus_tag="SKA53_11708" CDS complement(2336987..2337982) /locus_tag="SKA53_11708" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="proline iminopeptidase" /db_xref="CDD:23022" /translation="MDKVVGQKRQGAHLYPPVDPFDQRVLDVGDGHRLYVEQCGNPDG IPVVVLHGGPGGGCSPAMRRYFDPAIFRIVLFDQRGCGKSRPHASVVANTTWHLVADI EQIRQTLGIDRWIVFGGSWGATLALIYAQAHPQRVAALTLRGVFLMTQPELDWFYGGG AGKFWPDLWARFAGMIPADEQGDLIAAYHRRLFSGDLPLETRYARAWASWENALAAMD SDGLTGESPADYARAFARLENHYFHNAGFLSADQQILHPAQMAKIASIPGIIVQGRYD MICPPVSAYQLAQGWQNARLVMIGRAGHALSEPGIGAELVRSMDALGTQRVNLGL" gene 2338002..2338787 /locus_tag="SKA53_11713" CDS 2338002..2338787 /locus_tag="SKA53_11713" /EC_number="2.1.1.64" /note="COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase" /codon_start=1 /transl_table=11 /product="3-demethylubiquinone-9 3-methyltransferase" /db_xref="CDD:11934" /translation="MKQETMTAVSTGAKKMSPTNTVDPSEIAKFEAMAAEWWDLNGKF KPLHMMNPVRLDYITRQIAAEFGRDLQGPAPFAGLRLLDIGCGGGLLCEPMARLGAVV VGADAAARNIPVAQVHAAQSGLEIDYRHSTAEALAEAGEQFDVVLNMEVVEHVADPLG YLTACQQLLKPGGLHICSTINRNPKSFAMAIVGAEWVMRWLPKGTHEWAKFITPDELF ALLEKAGLVPVDRKGFVFNPLRFSWAISDRDLSVNYVTAATKG" gene complement(2338850..2339293) /locus_tag="SKA53_11718" CDS complement(2338850..2339293) /locus_tag="SKA53_11718" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulator, putative" /db_xref="CDD:24258" /translation="MPDSATSLAVSLFSEILVVDQLARASVAKVLPKGMELSHFSVLN HLAHAGAERSPAQLAKTFHLTRGAMTNTLHKLEWAGWVHIRPDWDDARRKMVSISPAG LSARDAAIAAIAPVIAEAVAKVGEEKVRIALPVLREMRLKLGQID" gene complement(2339293..2340123) /locus_tag="SKA53_11723" CDS complement(2339293..2340123) /locus_tag="SKA53_11723" /note="COG0388 Predicted amidohydrolase" /codon_start=1 /transl_table=11 /product="hydrolase, carbon-nitrogen family" /db_xref="CDD:10262" /translation="MKAGLVQLCSGDDPVANLAATRDLIAQAAAQGAGFVLTPEVTNC VSQDRAHQRAVLQPEADDITLAGLRSTARELGIWLSIGSLALKTQGDDTRFANRSFLI GPDGRIVARYDKIHMFDVDVSATETFRESAGFRPGDRAVVAQTPFARIGLTICYDIRF AYLHRALAQAGADILLVPAAFSPVTGAAHWEPLLRARAIETGCYVLAAAQTGSHPIRH GKPRQTYGHSMAISPWGEVLVDMELETGIAILDLDLVQVAQSRQRIPALTHDRPFESP " gene complement(2340120..2340377) /locus_tag="SKA53_11728" CDS complement(2340120..2340377) /locus_tag="SKA53_11728" /note="COG0695 Glutaredoxin and related proteins" /codon_start=1 /transl_table=11 /product="glutaredoxin" /db_xref="CDD:10564" /translation="MQTIEIYTKPTCGFCHMAKRVLTAKGVSFTEVNITAQPEKRAEM IQRAKGGSTVPQIFIGGKHIGGCDDLMALDRQGKLDGLLSA" gene complement(2340410..2341135) /locus_tag="SKA53_11733" CDS complement(2340410..2341135) /locus_tag="SKA53_11733" /note="COG1040 Predicted amidophosphoribosyltransferases" /codon_start=1 /transl_table=11 /product="competence protein F, putative" /db_xref="CDD:10767" /translation="MMRMQSVIRAIYPAQCVACETQTQAENGLCGTCWRETQFIDGTI CDTCGAPLPGDSDGHRLQCDDCMAIARPWDRGRAALVYNGIGRKLVLGLKHGDRTDLV EPAGLWMARLARALVHPDTVVVPVPLHWMRLLRRRYNQAALLAQVIARDLQRPVCVDA LLRPRKTAPLIGHSRDARFAALTGQITPNLRQQAQITGKPVLLVDDVMTSGATLAACT QALLDGGAVRVSTITLARVVKDA" gene 2341146..2341982 /locus_tag="SKA53_11738" CDS 2341146..2341982 /locus_tag="SKA53_11738" /note="COG0500 SAM-dependent methyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGDMTMPPPLVDRSALQRHRARAQPDHLFLHEIIADELQERLIE VNRAFTSMAIVTGFPDFWGARYPGAVIVPDDDTLALTPGAHDLVLHVMGLHWANDPVG QLVQCRHALKPDGLLLAACLGGQTLHELRTALAEAETAVAGGLSPRVAPMGEIRDLGA LLQRAGLALPVADGTKTTVSYANMFHLMHDLRKMGETNALTRRLRSMTRRKVLTQASS IYAQHYRNADNRVDATFEIIMLTGWAPADTQPQPLRPGSAKTSLADALGAKEMPLDRS ND" gene 2342035..2343123 /locus_tag="SKA53_11743" CDS 2342035..2343123 /locus_tag="SKA53_11743" /EC_number="4.99.1.1" /note="COG0276 Protoheme ferro-lyase (ferrochelatase)" /codon_start=1 /transl_table=11 /product="ferrochelatase" /db_xref="CDD:23087" /translation="MTMFDAHSSAATERPATCPVHANKDHPAIKPARVGILVANLGTP DATDYWSMRRYLNEFLSDKRVVDYSAWLWQPLLQLIILTKRPFSSGAAYKSIWNEEAN ESPLLTITKAQTAAIKKQMVERYGDDVRVDFCMRYGNPSTKSKVREMVDAGCTKILFF PLYPHYAGATSATANDQFFRALMDEKWQPIARVVEPYFEETAYIEALAQSIEKAYAEI EIRPEMLICSYHGVPERYLREGDPYHCQCQKTTRLLKERLGWDNTQIKTTFQSRFGPE EWLKPYTVKEVARLAEEDGIRHIAVCAPAFSADCIETLEEINEEIKESFEEAGGEHFT YIPCLNDDAAHIDALCGIIDKNLKGWLD" gene 2343139..2343414 /locus_tag="SKA53_11748" CDS 2343139..2343414 /locus_tag="SKA53_11748" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKIRKTEHGLTVDAADLGPLLGIAAADVPAKMRAGEITSQSETG VDADEGRIRLTFWYGGQRLRLVCDTEGNVLTTSRVPARRNPPRDIGG" gene 2343495..2344019 /locus_tag="SKA53_11753" CDS 2343495..2344019 /locus_tag="SKA53_11753" /note="COG2340 Uncharacterized protein with SCP/PR1 domains" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /db_xref="CDD:12015" /translation="MMIFGLVGTAVSACATTNRPLGPDGFPLPTAYIIAPGEEATVKF RMLDSVNALRQAGRLAPVALDAQLNAAAATHARDMSIQNRPWLFGADGSSPVLRARRA GFEGRFLGETMSESYESEIATLTAWMNDERTRAVIMDPDARLMGFSWFQESAGKLWWV LNMGAAPGFTGGFS" gene complement(2344039..2344521) /locus_tag="SKA53_11758" CDS complement(2344039..2344521) /locus_tag="SKA53_11758" /note="COG3034 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG family protein" /db_xref="CDD:12374" /translation="MMIGAAAGVAACSTTTEQDAPAYFGPDVTRIQVFKEQRKMQLLH NDKLLRQYDVALGFNPRDHKQQEGDGRTPEGAYVINRQNPNSRFHLSIGISYPNAVDV ARARAMGVHPGGDIFIHGTPAPWIGMPDWTWGCIAVSNTEMDEVYSMVQLGTKIFIYA " gene complement(2344632..2345834) /locus_tag="SKA53_11763" CDS complement(2344632..2345834) /locus_tag="SKA53_11763" /note="COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase" /codon_start=1 /transl_table=11 /product="23S rRNA (Uracil-5-)-methyltransferase rumA" /db_xref="CDD:11971" /translation="MLTIESLTHLGLGRASDGRSLIPRVLPGEEIDVAQDGTMRIVTP SAARVAAPCRHFKSCGGCAMQHASDDFVAGWKQDIVARALAAHGLHPVLHAIATSPTQ SRRRAKFAGRRTKKGALVGFHGRASHTLIDVPDCQLVTPALLATMPALQELTILAASR KGEVDLTVTETALGADVLVGTDKDLTPDLRVVLAALANAHGLSRLVWNDEPVVTINPP DQNFGGTKVTPPPGAFLQATKQGEAALLAAVDAITQGASRIVDLFAGCGTFTLPLAAR AEVHAVESETAMLAALDRGWRAGRTLRKVTTEARDLFRRPLEPDEIAKYDAAVIDPPR AGAEAQIDALARSDIKTIVMVSCNPVTFARDAKVLVDAGFAMPWVQVVDQFRWSPHVE IVSPFTRK" gene complement(2345835..2347667) /locus_tag="SKA53_11768" CDS complement(2345835..2347667) /locus_tag="SKA53_11768" /note="COG1132 ABC-type multidrug transport system, ATPase and permease components" /codon_start=1 /transl_table=11 /product="ABC multidrug efflux pump, fused ATPase and inner membrane subunits" /db_xref="CDD:10852" /translation="MKPERWINPFERAVGPPPQTLMAFLRWCLGGAMPVIGLGAVVSA LAGLLEVATALMLGWVIDAAIGSDMQSYFSTNLWLLAGVGAFFVILRPVILGLSGMFQ GVVLGPALNNLVLSRLHRHSLGQSVTFFDNDFAGRIAQKQMQGARATTDFVVDMIQTV AYALASLVGSVVLLLTIDYRTAGVLALWVLGYIWLITFYMPRIRTRSQARAAKRAMVT GQVVDTITNIKTVKLFAHDAFEDRAATDAMETYWGSAVHFGWLSTSFRFWLMGLGGLL PVLLVGTTLYFWSVGAATAGDIAAAGAISLRLAQMTGWVSFTLMGIYANVGEIEDAMQ TLSPAHQLTDAPDAVQLQPKGGAIELRDVTFSYGGGPGGLDHVSLSIASGEKLGIVGA SGAGKSTLVALLLRLYDTEQGQVLIDGHDIRDVTQESLRRQIAMVTQETAMFNRSARD NIRYGKPDATQAEVEAAATKAEAHGFIQSLRDFKGRKGYDSHLGERGVKLSGGQRQRI AIARAILKDAPILVLDEATSALDSEVEAAIQDSLDIIMDGKTVIAIAHRLSTLAAMDR IVVLDGGRIVEQGTHDALLAKAGLYARYWNRQSGGFINVQDAAE" gene complement(2347664..2349499) /locus_tag="SKA53_11773" CDS complement(2347664..2349499) /locus_tag="SKA53_11773" /note="COG1132 ABC-type multidrug transport system, ATPase and permease components" /codon_start=1 /transl_table=11 /product="ABC transporter, transmembrane ATP-binding protein" /db_xref="CDD:10852" /translation="MFQFFEELVDPYTPYQETDTPPKRLFPFLRAYAEPFRAVFWVTG ALSVVVAAVEIWLISYLGRLIDILQGGTPSEVWADSGTELILVALFILTLRPAVHVLQ VMLLNNTILPNFGTLVRWRAHRHVLRQSVGWFEDDFAGRIANRIMQTPPAAGEVVFQL FDAITFAIAYIIGAIILLGDADMRLILPLMVWLLPYLFLLAWVVRRIGPASEASSNAR SVVTGRVVDSYTNIHSVKMFAHHDSEIAYAKDAIENARRTFQHEMRLYTLMDVVLMVL NGVLIVGVVGWAIWLWGGGTATLGVVAVATSLTLRLNAMSGWIMWAISNFFRELGVVA EGMQTIAQPVTLLDRSRDDLRVTAGAVTISDLSHHYGREKGGLDRINLQIAPGEKVGL VGQSGAGKSTLVKLLLRFYDIEQGSIAIDGQDIATVTQDSLRRAIGMVQQDSSLLHRS VRENILYGHPEATEDQMIAAAKQAEAHDFILGLEDSEGNQAYAARVGERGVKLSGGQR QRIALARVMLKDAPILLLDEATSALDSEVEAAIQQTLYGMMAGKTVIAIAHRLSTIAQ MDRIIVMDQGRIIEDGTHDALLAQGGQYARFWARQSGGFLGQDAS" gene complement(2349556..2350698) /locus_tag="SKA53_11778" CDS complement(2349556..2350698) /locus_tag="SKA53_11778" /note="COG0617 tRNA nucleotidyltransferase/poly(A) polymerase" /codon_start=1 /transl_table=11 /product="polyA polymerase family protein" /db_xref="CDD:10487" /translation="MTRVTGAWLADPAAQLVCRLLTDAGYQAWFVGGCVRNALLGAPV ADLDLTTDARPDGVTQIAKAAGLKVIPTGIDHGTVTIIAKNTPFEVTTFRRDVATDGR RAVVAFADTMLEDARRRDFTMNALYAGPDGMVVDPLGGLPDLFARRVRFIEDAEQRIR EDYLRILRFFRFHAWYGADGIDPDALAACAANTDGLASLSRERVTAEMLKLLAAPDPA PAVASMAAAGVLGQILPGADAAPLAVLVHIEAAVGLLPSPIRRLGALGGDPVGALRLS KRDALTLEHMRSDLPVPELAYRHGAEAAINAAAITAAVLGHELDTNIDKNAQFAASQA FPLQAVDLMPDLQGPALGQAMKKAEAAWIASGFTLTKTELLLRLRG" gene complement(2350695..2351279) /locus_tag="SKA53_11783" CDS complement(2350695..2351279) /locus_tag="SKA53_11783" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family" /db_xref="CDD:25476" /translation="MPDLYHRLTDALAREGRASSDFDLNLDIALPQVQLTPAAVLFAV RAETETVILTKRSARLKHHPGQIAFAGGKQDAGDLTLTAAALREAHEEIGLLSDQVDV LGVLPPHQTVTGYLITPVLAVVHGPFDATPEANEVSEVFEVPFAHLANPAQYRTEGRH WQGRKRLYYAVPYGPYYIWGATARILRAFADRVS" gene complement(2351272..2352264) /locus_tag="SKA53_11788" CDS complement(2351272..2352264) /locus_tag="SKA53_11788" /note="COG1281 Disulfide bond chaperones of the HSP33 family" /codon_start=1 /transl_table=11 /product="chaperonin, 33 kDa" /db_xref="CDD:25266" /translation="MSLSAKIAWDDTVLPFQLDASDIRGRVARLDGVLEQVLKQHDYP PVIEALVAEMALLTALIGQTMKLRWKLSLQVRGSGAARLIATDYYGPTDDGQPARIRA YASYDADRLNHDAEPFSHVGNGYFAILVDQGEGTTPYQGITPLAGGSLSACAQTYFAQ SEQIPTRFALTYGRSQTPGEAAHWRAGGVMLQHMPKASPFASGEGGSGEQGLLDAVDL LSDDEGENWTRANILLDTVDDLELIGPIVTPTDLLVRLFHEEGPRVYDAQPITFGCTC SEARVRQSLSIYSAKDIRTMTTDEGNVTADCQFCGAHYVFAPETLGFEAKDTSA" gene 2352341..2352775 /locus_tag="SKA53_11793" CDS 2352341..2352775 /locus_tag="SKA53_11793" /note="COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes" /codon_start=1 /transl_table=11 /product="hydrolase, NUDIX family" /db_xref="CDD:25476" /translation="MIKRYGTVPKAGQRYTTRAGVYAILPRGGKLLLTYQGDPHFEVQ LPGGGIDPGESPLRALHREVFEETGYRIAAPRKLGTFRRFTFMPEYDLWAEKLCHIYL AQPVRPHGPPREPGHMAIWMSPAEALAELYNDGDAAFVAQHA" gene 2353035..2354252 /locus_tag="SKA53_11798" CDS 2353035..2354252 /locus_tag="SKA53_11798" /EC_number="6.3.4.5" /note="COG0137 Argininosuccinate synthase" /codon_start=1 /transl_table=11 /product="argininosuccinate synthase" /db_xref="CDD:10012" /translation="MTAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEE LEPARAKAEMMGAKSIYIEDLREEFVRDFVFPMFRANALYEGLYLLGTSIARPLISKR LVEIAAIEGADAVAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLTSRTKLLEF AEANQIPVAKDKRGDAPFSVDANLLHTSSEGKVLENPGEEAPDYVYQRTVAPEDAPNT PEMVEITFERGDAVAINGEAMSPATILTKLNELGGKHGVGRLDLVENRFVGMKSRGIY ETPGGTILLEAHRGIEQITLDSGAGHLKDSIMPRYAELIYNGFWFSPEREMLQALIDK SQEHVTGTVRVKLYKGSASTVARWSDRSLYSEAHVTFEDDAGAYDQKDAQGFIQLNAL RLKLLASRARRLK" gene 2354249..2354536 /locus_tag="SKA53_11803" CDS 2354249..2354536 /locus_tag="SKA53_11803" /note="COG3255 Putative sterol carrier protein" /codon_start=1 /transl_table=11 /product="sterol carrier family protein" /db_xref="CDD:12591" /translation="MTLADITALLQRGVDHAPLQGSLKFDCGADGVVVLENNTTSNTD RPADCTIRITLDNLAKLVKGKLNPMTGVVTGKLKVSGDARIALKLGELLKG" gene complement(2354562..2355257) /locus_tag="SKA53_11808" CDS complement(2354562..2355257) /locus_tag="SKA53_11808" /codon_start=1 /transl_table=11 /product="putative branched-chain amino acid aminotransferase" /translation="MWSGPRNLSTAMMYAFGNRADCAIWDEPFYAPYLAATGADHPMK DAIIAEHETNPAEVGRRCLDTISAQKPHFYMKHMPHHMIAGFPLDWASQCVNVHLIRH PARVIASYGAKMDHMTLEDIGYPQQAALYDRLGGVVIDSADIRADPEGMLRKLCAAID LAFDPAMLHWPAGPRAEDGIWASHWYNAVHQSTGFAGAEGDLPELAGEAAQLCRDAMP FYEKLAAVRLSSV" gene complement(2355266..2356165) /locus_tag="SKA53_11813" CDS complement(2355266..2356165) /locus_tag="SKA53_11813" /note="COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase" /codon_start=1 /transl_table=11 /product="putative IlvE, Branched-chain amino acidaminotransferase/4-amino-4-deoxychorismate lyase" /db_xref="CDD:28005" /translation="MSDVTTHQAEQDARNDAILIYVDGRIVPKAQAVISVYDSGFMLG DGVWEGLRLYDGKWAFLDDHIDRLFEAAKAIDLDVGLDRKGVISSLLDTQKANRMTTD AHARMMVTRGVKTRPFQHPNLSQQGPTFVIIMEHSRPKIPRPITLATVPHMRGLPMTQ DPKLNSHSKLNCILACIAAQKAGADEALMLDVHGFVNTTNACNFFIVKKGQVWTSTGD YCMNGITRQKVIGLCRANDIPVFERNFSLVDTYSADEAFLTGTFGAQTPVSMIDGRVI GTGELGPVTTRLRALYKDLVATS" gene complement(2356169..2357041) /locus_tag="SKA53_11818" CDS complement(2356169..2357041) /locus_tag="SKA53_11818" /note="COG0524 Sugar kinases, ribokinase family" /codon_start=1 /transl_table=11 /product="ribokinase" /db_xref="CDD:28249" /translation="MAIWNLGSINADVVYAVPHIPAPGETISTTGRQMFLGGKGANMS VAAARAAARVHHIGAVGNDGLWAVERLLEYGVDTRNIAVLDTETAQAVIMVDPAGENA ILLHPGANAEIPQTTLQNAMAEAQTGDWLVIQNETNLQRTAASLGRKMALRVAYAAAP FDADRVMAVLPYLDFLILNAVEADQLRQATGRTPADLDVADVIVTLGANGADWYGTAG HQHFPAIKVDPVDTTGAGDTFTGYVLAGLDRGMPMAQAIGQAMRAAALMVMRHGTADV IPDLSEVQAFQSRG" gene complement(2357041..2359296) /locus_tag="SKA53_11823" CDS complement(2357041..2359296) /locus_tag="SKA53_11823" /EC_number="2.3.1.8" /note="COG0281 Malic enzyme" /codon_start=1 /transl_table=11 /product="phosphate acetyltransferase" /db_xref="CDD:10155" /translation="MAKNKLTREDALQFHMQPTPGKWEIQATVPMTTQRDLSLAYSPG VAIPCEEIFANPATAYDYTNKGNLVAVISNGTAVLGLGNLGALASKPVMEGKSVLFKR FADVNSIDIELDTEDPDAFCNAVRLMGPTFGGINLEDIKAPECFIIEQRLKEEMDIPV FHDDQHGTAVICAAGLLNALYLSGKKIEDVKIVLNGAGAAGIACLELLKSMGARHDNC IMADTKGVIYQGRTEGMNQWKSAHAVVTDARSLADAMKDADVFLGVSAKGAVTQDMVA SMAPNPVIFAMANPDPEITPEEAHAVRPDAIVATGRSDYPNQVNNVLGFPYLFRGALD IHARAINDEMKIACAEALAALAREDVPDEVAMAYGKKLSFGRDYIIPTPFDPRLIHRI PTAVARAGMKTGVARRPIVDMDAYELSLKSRMDPTASILRSLNARARAAQSTVVFAEG DDPRVLRAAVLYQRAGMGKALVVGRSDDVRAKLTAEGLAEAVDEIEVVNAANTIHLET YKAFLYKRLQRNGFDAQDIHRLAARDRHVFAALMLAHGHADGMVTGATRKSAHVLELI NHVFDAQPHDGAVGVTAVLHKGRIVLITDTLVHEWPDENDLADIAERGASVARDLGLE PRVAFLSFSTFGSPVSERAEKMRKAPVVLDNRRVDFEYEGEMTVDVALNPRAQENYPF SRLTGPANVLVVPARHSASISVKLMQEMAGATVIGPILSGVGKPVQICSTVSTVNDIL NMAVIAACGID" gene 2359403..2362033 /locus_tag="SKA53_11828" CDS 2359403..2362033 /locus_tag="SKA53_11828" /note="COG0249 Mismatch repair ATPase (MutS family)" /codon_start=1 /transl_table=11 /product="DNA mismatch repair protein" /db_xref="CDD:10124" /translation="MRGGKMNTTATPMMAQYHEIKAQHPDALLFYRMGDFYEMFFDDA VAAADALDIALTKRGKHEDEDIPMCGVPYHAAEGYFLTLIRKGFRVAVCEQMESPAEA KKRGHKSVVRREVVRLVTPGTLTEDSLLDARRHNYLVAFHVVRDQGAIAWVDISTGAF HVMPCAGAKLGPELARLTPREVIVVDSAQGDWSTLVSESNAVLTTLGASAFDSTAGEK RLCALFKVGSLDAFGAFERAEIAAMSAVAEYLEITQRGNLPLLRPPVRETQKSAMQID AATRRSLELTHALAGGRQGSLLACIDRTVTAGGARLLERRLASPSCDLGIITARQDAV AFMLDQTRLCDDIRSDLRGTHDLDRALSRLALDRGGPRDMAAIRNTIAQAARLPVHPD MPPLLANVARDLAGHDVLVALLDAALIAEPPLLARDGGFIAAGYDAELDEARKLRDEG RSVIAGMQADFIVQTGISSLKIKHNNVLGYFIETTATHAEKMLAPPLNDTFIHRQTTA NQVRFTTVELSEIETRILNAGGHALEIEKRLYSSLKDAILAQAGPLGALARALAEVDL ASALAHLARTENWVRPKLDDSRAFAITGGRHPVVEMALQKQGAPFVANDCTLTDARVW LLTGPNMAGKSTFLRQNALLAILAQMGGFVPAQAAHIGIVSQIFSRVGASDDLARGRS TFMVEMVETAAILNQADDRALVILDEIGRGTATYDGLSIAWATLEHLHDVNRCRALFA THYHEMSALSAKLDGVENATVTVKEWDGDVIFLHEVKRGTADRSYGVQVARLAGLPQV VVDRAKVVLEALEKGEREGGRKAFVDDLPLFAAMPAPPPVKHQVSEVEARLKGVMPDE LTPKDALALIYELRGMVGSG" gene complement(2362043..2362597) /locus_tag="SKA53_11833" CDS complement(2362043..2362597) /locus_tag="SKA53_11833" /note="COG0576 Molecular chaperone GrpE (heat shock protein)" /codon_start=1 /transl_table=11 /product="co-chaperone GrpE" /db_xref="CDD:6339" /translation="MADKDAAYQSLDEMAAEGDMMDQAPEAGIEELEALRAERDEFRD KFMRALADAENTRKRADRDRREAENYGSARFARDMLPIYDNLRRALMSADEAEQDINK ALLEGVELTMRELISVFKKHGIDPIVPQVGDRFDPQLHQAMFEAPLPGTKAGDIIQVA AEGFMLHDRLLRPAQVGVSSTPAS" gene complement(2362610..2363710) /locus_tag="SKA53_11838" CDS complement(2362610..2363710) /locus_tag="SKA53_11838" /note="COG1420 Transcriptional regulator of heat shock gene" /codon_start=1 /transl_table=11 /product="heat-inducible transcription repressor" /db_xref="CDD:11135" /translation="MAFTAGALKEDKVSDQTPNITQMNDRSREVFRRVVEGYLESGAP VGSRSLTRTLSEKVSAATIRNVMQDLEYLGLLGSPHVSAGRVPTQLGLRMFVDGLLEI GDLDGKDRQAIDQTMQSADSDVVTMLDQVGQALSGVTHGASLVLTPKHEAAIKHIEFV SLNKDRALVVLVFADGHVENRIFTPPPGQTPSSMREAANFLNAIAEGHTLSELGQVIL REIKARRREIDTLAAELVQSGLALWENEGESTERLIVRGRGNLLTDNENEGDLERIRS LFDDLERKRDIAQFLDLAQDGDGVRIFIGSENKLFSLTGSSLVVSPYMNADRKIIGAV GVIGPTRLNYGRIVPIVNYTAQLVGKMIADRS" gene 2363790..2364497 /locus_tag="SKA53_11843" CDS 2363790..2364497 /locus_tag="SKA53_11843" /note="COG0689 RNase PH" /codon_start=1 /transl_table=11 /product="ribonuclease PH" /db_xref="CDD:10558" /translation="MRPSGRQINEMRNVTIETNVTMHAEGSCLIKCGNTHVLCTATID DRVPPFLKNSGLGWVTAEYGMLPRATNTRMRREAKEGQSGRTQEIQRLIGRSLRAGVD RVALGERQIIVDCDVIQADGGTRCASITGGWVALKLAVLKLMKTGQIISDPLVDPVAA ISCGIYAGQEVLDLDYPEDSEAGVDGNFVMTGGRLVEVQMSAEGATFSRAQMDGLLGL AEKGVAELTALQLAAVR" gene 2364497..2365105 /locus_tag="SKA53_11848" CDS 2364497..2365105 /locus_tag="SKA53_11848" /note="COG0127 Xanthosine triphosphate pyrophosphatase" /codon_start=1 /transl_table=11 /product="putative deoxyribonucleotide triphosphate pyro