LOCUS RD1 4331634 bp DNA circular BCT 26-JAN-2007 DEFINITION Roseobacter denitrificans ACCESSION RD1 VERSION RD1.1 KEYWORDS HTG. SOURCE Roseobacter denitrificans OCh 114 ORGANISM Roseobacter denitrificans OCh 114 Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter. REFERENCE 1 (bases 1 to 4331634) AUTHORS Swingley,W.D., Sadekar,S., Mastrian,S.D., Matthies,H.J., Hao,J., Ramos,H., Acharya,C.R., Conrad,A.L., Taylor,H.L., Dejesa,L.C., Shah,M.K., O'huallachain,M.E., Lince,M.T., Blankenship,R.E., Beatty,J.T. and Touchman,J.W. TITLE The Complete Genome Sequence of Roseobacter denitrificans Reveals a Mixotrophic Rather than Photosynthetic Metabolism JOURNAL J. Bacteriol. 189 (3), 683-690 (2007) PUBMED 17098896 REFERENCE 2 (bases 1 to 4331634) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (27-SEP-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4331634) AUTHORS Touchman,J.W. TITLE Direct Submission JOURNAL Submitted (11-JUL-2006) DNA Sequencing Center, Translational Genomics Research Institute, 445 N. Fifth Street, Phoenix, AZ 85004, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000467. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..4331634 /organism="Roseobacter denitrificans OCh 114" /mol_type="genomic DNA" /strain="OCh 114" /db_xref="taxon:375451" gene 1723..2871 /locus_tag="RD1_0003" /db_xref="GeneID:4198060" CDS 1723..2871 /locus_tag="RD1_0003" /EC_number="2.1.2.10" /codon_start=1 /transl_table=11 /product="aminomethyltransferase, putative" /protein_id="YP_680429.1" /db_xref="GI:110677422" /db_xref="GeneID:4198060" /translation="MAIIYRTSALAQRHAEIGGELEDWNGMGTAWFYDHSDERAKADY EAVRTKAGLMDVSGLKKIHLSGPHAAAVIDRATTRNVDKLMPGRAVYAAMLDDRGLFI DDCVIYRLSVNNWLLVHGTGTGHESLAMAAYGKNVSMIFDDDLHDMSLQGPVAVDFLA KHVPGIRDLAYFGIIQTKLFGMPVMISRTGYTGERGYEIFCEGRHAIALWDAILEDGK DMGIRPVQFSTLDLLRTESYLLFYPGDNSETYPFENGAACGDSLWELGLEFTVSPGKT GFRGAENHYALEGKERFKIYGVRLEGTTAADEGADLLKDGEKVGVVTYGMRSDLFDHT VGIARMPVECATPGTKMTVRNGDGTEIPCVAEEMPFYDKDKAIRTAKG" gene 2948..3556 /locus_tag="RD1_0004" /db_xref="GeneID:4198467" CDS 2948..3556 /locus_tag="RD1_0004" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680430.1" /db_xref="GI:110677423" /db_xref="GeneID:4198467" /translation="MSKFQFPKSIRSRPVYGTLTPRRGKSHLMIADAEGAEALLDLAQ QDAEVFRTAHLIYIPKATGETYVEKLKALKPAQFYVGPSYEASVSRIRRVLSDAHMGL QVYLTGTEGLMGQAMNEAMTAGIPHQAIQTEHRGSVARRMQCVHCKGITEDVMTDPFQ CTHCGLHLFVRDHYSRRLAAFQGVCIDAEDPGNIPEPVELYK" gene 3553..4539 /gene="vanB" /locus_tag="RD1_0005" /db_xref="GeneID:4198468" CDS 3553..4539 /gene="vanB" /locus_tag="RD1_0005" /EC_number="1.14.13.-" /codon_start=1 /transl_table=11 /product="vanillate O-demethylase oxidoreductase, putative" /protein_id="YP_680431.1" /db_xref="GI:110677424" /db_xref="GeneID:4198468" /translation="MSAAPQKAKAGAEKIEVEVSAIVPVNELVSRFEFKRRDGQPFPP FSAGAHTVVEMNDNGRMRLNPYSLMSDPADTSIYAISVRRDDEGRGGSLFMHRHVKVG DPMTITYPVNLFPLDLRGHKHVFLAGGIGITPFLSMIATLERMGGRWEMHYACRSKAL GSYVDELTGRHPDKVHVYCDDQDEAIPLESLLDGQPLGTHVYVCGPAGMINWVHSTAE AHGWPKEHVHSEEFLAPQPGKPFEVRLCKSDIVIQVGEHESLLEAIERCGVQAPFLCR GGACGQCETDVVEADGEFIHRDHWLEEEEHASGKKIMPCVSRFVGKTLVLDR" gene 4551..5618 /locus_tag="RD1_0006" /db_xref="GeneID:4198469" CDS 4551..5618 /locus_tag="RD1_0006" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680432.1" /db_xref="GI:110677425" /db_xref="GeneID:4198469" /translation="MTIQFNTETFRDDYSFRNSDWAIKRFPFPFHEDSYMYSVNMEQH RGGPKGSVYEMRFDVDEHYVSEMADRAIVLAEDPLRCQSLPHMTLAGWDTLELIMVSK SEDYPDLFELHRDGNRWRWINKPMDIDHTFTFLDETTLPCGPLEYITRQAQGDYAVLD QRDDMLYMDAGMVTTQADWSLDFDIGMDFFEWHAPVPLAHEMGIFKRALKFLLNIQQG APARRLNWTMTVNPLLDTSPENYHKWGVQKTTLTPENIGSKQHLRVELQTFYRLPRSN ALLFPIRCYLISFQDLVTIPKWGRRLHRVIRDLPEELATYKGFIDNRPLMLDYLSRYD DGLPTSPGVWPDLDTEPSLQK" gene complement(5659..6306) /locus_tag="RD1_0007" /db_xref="GeneID:4198470" CDS complement(5659..6306) /locus_tag="RD1_0007" /codon_start=1 /transl_table=11 /product="DNA-binding protein" /protein_id="YP_680433.1" /db_xref="GI:110677426" /db_xref="GeneID:4198470" /translation="MNVDSTKTMTKLIQDPHGVREEREKVLEVAIGREVRAYRKQKGM TVAELSRLTDLSIGMLSKIENGNTSPSLTTLQALANALSVPLTAFFKGFEEHREAVHT KAGEGLEIERAGTRAGHHYDLLGHIGSNNSGVIVEPYLITLNTEADTFQTFQHEGIEM IYMLEGKVGYMHGNAHYTLEAGDTLFFDADAPHGPEDLIELPARYLSVICYPQRS" gene 6341..7435 /gene="araC" /locus_tag="RD1_0008" /db_xref="GeneID:4198471" CDS 6341..7435 /gene="araC" /locus_tag="RD1_0008" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family, putative" /protein_id="YP_680434.1" /db_xref="GI:110677427" /db_xref="GeneID:4198471" /translation="MQHTRLATKGKRFSTYCKKILLRLKNVLHMTRSTTSPRSIGFLL FPGFPMACLTSVIEPLRAANEISGATAFTWELIAEQPGPVASSAGIPFGPQSLLADVD APDYLLLLSAPSVRFADQRTPAHLRRLARHGCTLGAISGGVFPLVRSGAVEGARLSVH WCYEAAFAAEFPDMLQSDEVIETSDRCVTASGAAAAFDLALGFIDTALGPNVATEVAC WFQHPMMRKIGVKQSVPAHLTDSIQNDLSPLVSDAIRIFAEDLSNPVSVAGVAKALNV SPRHLERSFKKAAGQNPTTYFRWLRMQAARQIVLYTNDAISDVAAAVGYASTKHFIRH YRAEYGLSPQEDRKRINLYRTEGNRPVPSV" gene complement(7540..8100) /gene="soxG" /locus_tag="RD1_0009" /db_xref="GeneID:4198472" CDS complement(7540..8100) /gene="soxG" /locus_tag="RD1_0009" /EC_number="1.5.3.1" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, gamma subunit" /protein_id="YP_680435.1" /db_xref="GI:110677428" /db_xref="GeneID:4198472" /translation="MHDLIPITPLGGQAPRVDTVGAVTVTEVTDRALASVAARMGAEK AAGETLSKTIGAQAPAPSRLAGDTLSAFWTGPDQWMIEAPIDTHEDLAKQLVAAFGST ASATEQTDAWCRFDLSGPHLPQVMEILCPVDTHIWRGGEATRTSIDHLGCFLLCRDPQ TFSVIGPRSSAGSLHHALLTACRAAL" gene complement(8093..11044) /gene="soxA" /locus_tag="RD1_0010" /db_xref="GeneID:4198473" CDS complement(8093..11044) /gene="soxA" /locus_tag="RD1_0010" /EC_number="1.5.3.1" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, alpha subunit" /protein_id="YP_680436.1" /db_xref="GI:110677429" /db_xref="GeneID:4198473" /translation="MNQINRLNGGLIDRKATKSFTFDGARYTGCAGDTLASALLANGV RLMGRSFKYHRPRGPMTAGSEEPNAIVELRSGARSEPNTRATTAELFDGLSATSQNRW PSLKWDAMAINDSLSPFLSAGFYYKTFMWPAAFWEKLYEPIIRRAAGLGSLSHEPDPD AYDKGFLHCDLLIIGAGPAGLAAALTAGESGARVILADEDYVLGGRLASETGLLSDQD GHAWAQEAVARLHAMPNVRVMSRSTVIGAFDHGVYGMLERVSDHLAEPAPGKPRQILW RVYSKRAILAAGATERPIVFENNDRPGIMLASAMRAYANRWAVTLGKSVAVFTNNDDG HRTAVDLRAKGVKVTVIDTRSDAVSKADYETIPGGVVVNTKGRLGLKCVDVRRASGGL RTLYVDGLGVSGGWNPNVHMTCHQRGRPEWNDDLAAFVPGGTLPTGLIPAGAATGAFS THAALASGQDAACTALTDLGHTPTRPDLPAAEDAPLRISAFWHVKDAKRAWVDQQNDV TAKDVKLAHQENFVSVEHLKRYTTLGMATDQGKTSNIAGLAIMAEVAGKQIPQVGTTM FRPPYTPTAIGAFAGRSRDEDFRPVRKTPSHYWAEEQGAVFVEVGMWLRAQWFPKPGE TNWRESVDREVLQTRKSVGVCDCTTLGKIDVQGADAADFLNKVYANAFAKLAVGKTRY GLMLREDGIAMDDGTAARLAEDHFVVTTTTANAVPVYRHMEFVRQCLFPDLDVQLIST TEAWAQYAVAGPNSRKLLQKIVDPEFDISNEGFPFMACGEITVCGGLRARLFRISFSG ELAFEIAVPTRYGDALMRRLMAEGEEFGVTPYGTEALSVMRIEKGHAAGNELNGTTSA HNLGMGRMVSKKKDCIGNTLSERPGLTEEDALKLVGFKALNGTDKVPAGAHLITVGDP VDAAHDQGYITSACYSPNLGCHIAIGYLKSGDSRMGEKVRLVSPLTGVDHEVEVVSAH FVDPEGERLRA" gene complement(11041..11328) /gene="soxD" /locus_tag="RD1_0011" /db_xref="GeneID:4198474" CDS complement(11041..11328) /gene="soxD" /locus_tag="RD1_0011" /EC_number="1.5.3.1" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, delta subunit" /protein_id="YP_680437.1" /db_xref="GI:110677430" /db_xref="GeneID:4198474" /translation="MIIDHPLLGPRDAAEFVYKGDASLIHRPDWQADDAAAAFHEYGY LRDNPAGLHRELWFHEQGDRSWLVVTRDTTTHEITKVELARDVARTEGRSK" gene complement(11341..12591) /gene="soxB" /locus_tag="RD1_0012" /db_xref="GeneID:4198475" CDS complement(11341..12591) /gene="soxB" /locus_tag="RD1_0012" /EC_number="1.5.3.1" /codon_start=1 /transl_table=11 /product="sarcosine oxidase, beta subunit" /protein_id="YP_680438.1" /db_xref="GI:110677431" /db_xref="GeneID:4198475" /translation="MRYSGFAVLKEALTGHRGWGPAWRDASPQNAYDFVIIGGGGHGL ATAYYLAKEFRQSRIAVLEKGWIGGGNVGRNTTIIRSNYLLDGNQPFYEFSLKLWEGL EQELNYNAMVSQRGILNLIHTDAQRDAFIRRGNAMILNGADAELLSTEQIKQRYPFLN TENARFPIKGGLAQHRGGTVRHDAVAWGYARAADQQGVDIIQNCEVTGFRIENGTCIG VETSRGFIGAKKVAACVAGSSSRLMAKAEMRLPIESHVLQAFVSEGLKPLLPGVITFG AGHFYCSQSDKGGLVFGGDLDGYNSYAQRGNLPVVEDVCEGGMAIFPNLGRARLLRMW GGIMDMSMDGSPIIDRTHINGLYFNGGWCYGGFKATPASGFAYAHLLATDTPHPTATA YGFDRFATGHMIDEKGQGNQPNLH" gene 12850..13797 /gene="opuAC" /locus_tag="RD1_0013" /db_xref="GeneID:4198476" CDS 12850..13797 /gene="opuAC" /locus_tag="RD1_0013" /codon_start=1 /transl_table=11 /product="glycine betaine transporter, substrate-binding protein" /protein_id="YP_680439.1" /db_xref="GI:110677432" /db_xref="GeneID:4198476" /translation="MNKFTTALATGVLAFAPAFAMADSDDPIIIPIHNWSSQIVMSNV VGQMFEEMGLNVEYVTTDSQAVYESIRLGDVTLGMEVWEGAFGASFRAAMEKGGIVDA GDHNAVTREDWWYPMWTKDACPGLPSWEALNECAEIFATPETGDKGRYLDGPVDWLKH GKERVEALGMDFEVINAGSAAALWAEIGAAEADKRPIVVFNWTPNFAEAVWPGEFVEF PEWVDGCDKDPAVGPNPDALYDCGNPADGYMKKAAWEGMEEKWPDAFAVLQRISFTNP QIAQMAKLVDIEDYEPEEAAEIWLEENEDLWRPWLDASS" gene 13879..14913 /gene="opuAA" /locus_tag="RD1_0014" /db_xref="GeneID:4198477" CDS 13879..14913 /gene="opuAA" /locus_tag="RD1_0014" /EC_number="3.6.3.32" /codon_start=1 /transl_table=11 /product="glycine betaine transporter, ATP-binding protein" /protein_id="YP_680440.1" /db_xref="GI:110677433" /db_xref="GeneID:4198477" /translation="MKDSMNVASDIVISAKNVWKVFGNNPEAYLKTMTAGRSFDDIRA DGYIAGVRDVSVDVSRGELLVIMGLSGSGKSTLVRCLSRLHEITAGTITVDDQVIGDL SEKQLIELRRNKMGMVFQSFGLLPHRTVLENVSFPLEMRGQDRHTRRERALEVIKLVG LEGREEYFPRELSGGQQQRVGIARSLAIEPDIWFLDEPFSALDPLIRREMQDEFIRLR AMLGKTIVFITHDFDEALRLADRIAIMKDGAIEQCDTPDQIVLNPATDYVAKFTQEID KARVVHAAGLIKPDLTGSGEPVKASATIQELAKMLIDDARDVIPVADETGPIGAMARK DALDILLQAN" gene 14913..16892 /gene="opuAB" /locus_tag="RD1_0015" /db_xref="GeneID:4198478" CDS 14913..16892 /gene="opuAB" /locus_tag="RD1_0015" /codon_start=1 /transl_table=11 /product="glycine betaine transporter, permease protein" /protein_id="YP_680441.1" /db_xref="GI:110677434" /db_xref="GeneID:4198478" /translation="MAIVATNTESQTTPLSSRTLGLGLFLFAVALTLLHYAGLLPAWL HRLPEAVIPPFETWLDAIFNFVKDDLGLLALTRFLTGGLEAVLDVTANLLYGKRRWPF IDPIPWSAIAAATTVLGYYLGGWRLAALAGGTCVWTAMIGQWEIAMETMSVLVISAPL AFMIGLLVGIYAWKSPSFNRALLPFLSVMQTLPFFTYLLPAVIFFKVGPTAAAVATTV FAIPPMILMTTLGLQKVSSEVVEAGKMSGCTRFQMMRHVYLPSARTEILVGVNQVIML CLAMVVLTAFIGMPGLGAKLLQMLGSFKIGRAFEIGVTIVLVAITLDRLSKAWVAKLP EHFDRGTPFYIRHKYLVAGAVGFALFFALAQLVPILAEVGRRQSLSQGREIDQLIKAY LALDWVKASTDAMRYVLNVWILNPFRDFLLSIPTSAFIILVVAAGLVIAGPRQAVLAA VFFSLVALSGWWDRSVITLYSVIAAVSLALIIGIPVGILAARRETTARRMLLVCDTAQ TFPSFIYLIPAIMLFGITATSVVMSILIFAMVPLVRYTIEGLRSVPAEMMEAADMSGA TKLQKLWQVQLPLALPTMAVGFNQAIMFAFFMVIIAAFIGTQDLGQELQRTLAGAYLG KNLVLGLCVSLMALTFDMIVMKWAQEKKAKLGLAR" gene complement(16992..17639) /gene="rluA" /locus_tag="RD1_0016" /db_xref="GeneID:4198479" CDS complement(16992..17639) /gene="rluA" /locus_tag="RD1_0016" /EC_number="4.2.1.70" /codon_start=1 /transl_table=11 /product="ribosomal large subunit pseudouridine synthase A" /protein_id="YP_680442.1" /db_xref="GI:110677435" /db_xref="GeneID:4198479" /translation="MDETYAPPQTPLTVLHEDAEVLLVDKPAGLLSVPGKGPHLADCL LARVQAMFADALLVHRLDRDTSGVMIFALTPHAQRHLGLQFEKRMTRKTYVARVWGVP CDKTGTVDLPLIVDWPNRPRQMVCHETGKPAQTEWRVLKDDGQTARMRLHPHTGRSHQ LRVHMRALGHPILGDPFYATGPARDYPRLMLHSEELRFKHPQGGRSMKVRATAPF" gene complement(17670..20117) /locus_tag="RD1_0017" /db_xref="GeneID:4198480" CDS complement(17670..20117) /locus_tag="RD1_0017" /EC_number="1.5.99.2" /codon_start=1 /transl_table=11 /product="FAD dependent oxidoreductase, putative" /protein_id="YP_680443.1" /db_xref="GI:110677436" /db_xref="GeneID:4198480" /translation="MALPPSHARVVIIGGGVIGCSVAYHLIKQGWSDVVLLERKQLTS GTTWHAAGLIAQLRATANMTKLAKYSQELYGNLEAETGVATGFKRCGSITVALTEERR EEIYRQAAMARAFGVDVEEISAQEVKARYEHLNISDVTGAVYLDKDGQGDPANIALAL AKGARQGGAKVLERTCVTGITCEGRRATGVDWTQGTQTGHITADMVVNCGGMWGHEVG RMAGVNVPLHACEHFYIVTEAIAGLTQLPVLRVPDECAYYKEDAGKMLLGAFEPNAKP WAMKGIPADFEFDQLPEDFDHFEPILEAAVERMPMLAEAGIHTFFNGPESFTPDDAYH LGLAPEMDNFWVAAGFNSIGIQSAGGAGMALAQWMEAGEKPFDLGDVDISRMQPFQGN KTYLFERSKETLGLLYADHFPFRQKATARGVRRTPFHDHLIRHGAVMGELAGWERANW FAVNNQKPEYEYTWKRQNFFVNVAEEVAAVRTNVGMYDMSSFGKIRVEGRDAVAFMNH VGGGQFDVPVGKIVYTQFLNHKGGIEADVTVTRLSETAFLVVTPAATRLADQTWMMRH RGDFNVVVTDVTAGEGVLAIMGPNARKLLQEVSPADFSNAVNPFGTAQEIELGMGLAR VHRVTYVGELGWEVYVSSDMAAHAFEVLHEAGQDLGVKLCGMHMMDCARMEKGFRHFG HDITCEDHVLEAGLGFAVKTDKPDFIGRDAVLRKKDTGLESRLVQFKLKDPEPLLYHN EPVLRNGEIVGFLSSGAYGHHLGGAMGLGYVPCAGETAAEVLASDYEVDVAGVRVAAD VSLQPMYDPKSERVKAG" gene complement(20147..21037) /locus_tag="RD1_0018" /db_xref="GeneID:4198481" CDS complement(20147..21037) /locus_tag="RD1_0018" /codon_start=1 /transl_table=11 /product="homocysteine S-methyltransferase, putative" /protein_id="YP_680444.1" /db_xref="GI:110677437" /db_xref="GeneID:4198481" /translation="MTQITLLDGGMGQELVHRAGDKPTPLWSAQVMVDHPGLVEAVHA DYFAAGATVATTNSYAIHHDRLEGTGMEDAFEDLYQRALSEASAARATHGSGRIAGAL GPLVASYRPDLHPSREVAVPLFVEAAALLAPECDLLILETVASVAHARDALEGARSTN LPVWLSLTVSDSDGMQLRSGEPLEDALEVAANADAVLVNCSAPEAVTKAMPILAQSGK PFGGYANGFVQISEDFLKEKPTVDTLETRRDMGPRAYAGYVMEWVSAGATIVGGCCEV GPKHIAELKKRLLAAGHTLV" gene complement(21034..23484) /locus_tag="RD1_0019" /db_xref="GeneID:4198482" CDS complement(21034..23484) /locus_tag="RD1_0019" /EC_number="1.5.99.2" /codon_start=1 /transl_table=11 /product="dimethylglycine dehydrogenase, putative" /protein_id="YP_680445.1" /db_xref="GI:110677438" /db_xref="GeneID:4198482" /translation="MAEFPTTARVVIIGGGVVGTSTLYHLAKAGWKDCVLLEKNELTA GSTWHAAGNVPNFAGSWAVMNMQRYSAAMYRTLGDDVDYPMNYHVTGAVRLAHSKERM QEFEKVAGMGRAQGLQMDICTPEELQQYNPFMETHDLAGGMWDPLDGDIDPAQLTQAL AKGARQAGGRIERFCPVIGMDRDGDEWIVKTEKGDIRCEKVVNCAGYYAQRVGEMFKP FGGRTVPMVVMSHQYFLTEPIPELEAWTKENGKKVAMIRDVDTSYYLRQEKTGLNLGP YERNCKAHWVTPEDPMPEDFSFQLYPDDLERLEYYIEDAMARLPLLGTSGVGRNINGP IPYAPDGLPMIGPMPGVRNAFEGHSFTFGIAQGGGAGKVLSEWIMHGETELDMWAVDP RRYTDYADHDYCLSKALETYGHEYAMHFPRHEWPAGRDKKLSPVDEKIRALGGQMGAF NGWERANWFAKPGDDTSEESTQTWDRNGPWAARIKEEVEAVRDGVGVLDLPGFSRFKV AGPGADEWLRGLTTGSLPRIGRVGLLYFADSRGRILTEMSVTREAEDRFVLVTAASAQ WHDREWLEAQMPDNCAFTLEDWTDRMSTLIVTGPEARALLGKLCDADLTLPWLSFQET EVAGGWAALLRVSFAGELGWEVHAENADIPAMYDAILDAGAVPFGMYALNSMRIEKGY RAWKGDLSSDYSLLEGGLERFIRFDKPQDFPGKAALLNEKQQGVKKQFVTLVVDAGAQ DAPYMAPLFHGDEVVGETTSGDWGYRVNKSIALGMLRKDLTEPGTEIEVEIYGQRRRA TVQADQPLWDPQNERIRA" gene complement(23486..23650) /locus_tag="RD1_0020" /db_xref="GeneID:4198483" CDS complement(23486..23650) /locus_tag="RD1_0020" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680446.1" /db_xref="GI:110677439" /db_xref="GeneID:4198483" /translation="MAFPMRRGATDMTSNVTTPNPNTPPAGFDRETHRFAVGKGGYDK TTDFVPQEEK" gene complement(23619..24242) /locus_tag="RD1_0021" /db_xref="GeneID:4198484" CDS complement(23619..24242) /locus_tag="RD1_0021" /codon_start=1 /transl_table=11 /product="homoserine/lactone efflux protein" /protein_id="YP_680447.1" /db_xref="GI:110677440" /db_xref="GeneID:4198484" /translation="MMGFEAWTIFALFWIVFVTTPGPNAVNCIQNGIYLGFGRAMIGV LAILTQATLFLILSAFGITALIAASPAGFFAAKMIGAGFLIYLGVRGWMQARTPVTIS AKPAKSIYFQALAIATINPKSVAGYLAAFSQFVQADVPIWEQMIVIVPTALTLTALSY TGFCALGAGLGRAALDAVFSVWLRRILASCFVIYGLLLGLSNAPGRN" gene complement(24239..24811) /locus_tag="RD1_0022" /db_xref="GeneID:4198485" CDS complement(24239..24811) /locus_tag="RD1_0022" /codon_start=1 /transl_table=11 /product="DNA-binding protein" /protein_id="YP_680448.1" /db_xref="GI:110677441" /db_xref="GeneID:4198485" /translation="MHHSLPDEPQTLGADLRALRKARGLTLADLAERLGRSVGWLSQV ERDKSDPSISDLRAIAKVLEVSISMLFRHAPATATEAGYIVRAAARRPMGSKTEGLVE ELLSPDLTDDFEMVHSTFEPGSRVSEMVTRPTQEVAYLLSGTLQIEINDTVHTIYPGD SFRIRGEAFRWSNPYAEPAVAIWVIAPPVY" gene 24803..24910 /locus_tag="RD1_0023" /db_xref="GeneID:4198486" CDS 24803..24910 /locus_tag="RD1_0023" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680449.1" /db_xref="GI:110677442" /db_xref="GeneID:4198486" /translation="MVHGRENSPSNFTVPELNEKIQTFFTPQGAFFPPD" gene complement(24931..25386) /locus_tag="RD1_0024" /db_xref="GeneID:4195713" CDS complement(24931..25386) /locus_tag="RD1_0024" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680450.1" /db_xref="GI:110677443" /db_xref="GeneID:4195713" /translation="MKTDYPTLAKTIAALTEGETDVIALMATVACEIHHCDDRFDWTG FYRVTGPQMLKIGPYQGGHGCLVIPFSRGVCGAAARTREIQLIEDVDAFPGHIACASS TRSELVLPVENARGALLGVFDIDSDQPAAFEQRDADEIDDILKAVFGRL" gene complement(25435..26607) /locus_tag="RD1_0025" /db_xref="GeneID:4195714" CDS complement(25435..26607) /locus_tag="RD1_0025" /codon_start=1 /transl_table=11 /product="thiolase, N-terminal domain" /protein_id="YP_680451.1" /db_xref="GI:110677444" /db_xref="GeneID:4195714" /translation="MTDVLILGAARTPMGGFQGALSSFSAAQLGGVALKSALQDAGVS SVDEVLMGCVLPAGQGQAPARQAGFAAGLDETVPATTLNKMCGSGMKAAMIAFDQIAL GQAGLVAAGGMESMSNAPYLLHKMRSGARLGHSEVIDHMFLDGLEDAYDKGRLMGTFA EDCAEMFQFSRQAQDAYALASLSRAVEAQKSGAFDGEITPVDVVSRKGTIKVSADEQP GAARPDKIPQLKPAFREGGTVTAANASSISDGAAALVLASGAYAASKNLTARARIVGH ATHAQTPGLFTTAPVPAARKLLEKTGWDKGSVDLWEVNEAFAVVPLAFMHEMALDHEV VNVNGGACALGHPIGASGARIMVTLLNAMEKRDVKRGVAAICIGGGEATAIAIERG" gene 26690..27043 /locus_tag="RD1_0026" /db_xref="GeneID:4195715" CDS 26690..27043 /locus_tag="RD1_0026" /codon_start=1 /transl_table=11 /product="anti-anti-sigma factor, putative" /protein_id="YP_680452.1" /db_xref="GI:110677445" /db_xref="GeneID:4195715" /translation="MELASKTEEQLRIVSVQDTRIDAAVAIEFKDAMRVETDDGPDLV VLDLSRVEFIDSSGLGAIVAAMKHMGKDRKMALAGLTPTVERVFTLTRMDSVFSVFPT LEGALAELKPQQTCQ" gene 27055..27501 /gene="rsbW" /locus_tag="RD1_0027" /db_xref="GeneID:4195716" CDS 27055..27501 /gene="rsbW" /locus_tag="RD1_0027" /EC_number="2.7.11.1" /codon_start=1 /transl_table=11 /product="serine-protein kinase, putative" /protein_id="YP_680453.1" /db_xref="GI:110677446" /db_xref="GeneID:4195716" /translation="MESEQLRPFRVCVESGQYAAREALREFLDALRPLKLDVEESGTI ELVLAEVLNNIVEHAYPPSQPSGPIAIECAHRQDGLILKIKDEGHAMPDGKMPLGELT PLDVELEDMPEGGFGWFLISHLAKDVRYARVGHENHLNMRLAVGTS" gene 27764..29341 /gene="ggtA" /locus_tag="RD1_0028" /db_xref="GeneID:4195717" CDS 27764..29341 /gene="ggtA" /locus_tag="RD1_0028" /EC_number="2.3.2.2" /codon_start=1 /transl_table=11 /product="gamma-glutamyltranspeptidase, putative" /protein_id="YP_680454.1" /db_xref="GI:110677447" /db_xref="GeneID:4195717" /translation="MRDFHLPGRSPVLASNGMCATSHPLAAKTAVDVLQQGGNAMDAA IAGAVLLGLCEPAMTGIGGDCFVLWSDRDRQNVRALNGSGRAPAALDAHDLREAGETT VPSFSAHAVTIPTAVAAFAHLAETVGTLGLDRLLAPSIKYAQEGIPVAPRVAFDWENY GHNLQGSAREQYLIDGKLLKTGDIFRAPGQAEVLRRIAEQGASAFYTGEIAEDMVATL QAAGGVHTLDDFAAAACDETTPIFGTYKDIDIVEHPPNGQGATAILMLNILAQFDLAS MAPFGTQRAHIEAEAAKLAYDARNRFLADADHTTRLAHMLDMSLAKKLAAMIDPGKAM PAAAPLTEMVHKDTVYISTVDRDGMAVSLIYSIFKDFGSGIASDKFGILLQNRGAGFT LEQGHPNELKGGKRPMHTIIPAMLRKNGKVIMPFGVMGGAYQPNGHARFVTNLTDFGM DPQATIDAPRAFSDMGNMQVERGYSDAVRQELTDLGHSVSIPQTAIGGAQAIMMHDNG VLEGASDPRKDGCALGY" gene complement(29350..29676) /locus_tag="RD1_0029" /db_xref="GeneID:4195718" CDS complement(29350..29676) /locus_tag="RD1_0029" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680455.1" /db_xref="GI:110677448" /db_xref="GeneID:4195718" /translation="MIKTRAKYHLGQIVRHKKHPFRGVIFDVDPEFSNTEEWYEAIPE DSRPVKEQPYYHLLAENEQSYYVAYVSEQNLIADYSGEPVDHPDIPDLFGPLQDGSYP LHFQLN" gene 29762..30643 /locus_tag="RD1_0030" /db_xref="GeneID:4195719" CDS 29762..30643 /locus_tag="RD1_0030" /codon_start=1 /transl_table=11 /product="auxin efflux carrier family protein" /protein_id="YP_680456.1" /db_xref="GI:110677449" /db_xref="GeneID:4195719" /translation="MNLALTVLEIVAPVFLLAAIGFVWVKLGNEYRIRFVTQLAMTLS VPCLIFVSLMETQIAPEDLTALSLAAIGAYGVVTVAILALVFVLRLNRQTFAAPLMFG NTGNIGLPLAFFAYGETGLGYAIIVFGIMAVWSFTFGVWLVAGAGSFGKVVREPMVAG TILGAIFLWQGWQTPPFVTNTLDLIGQMAIPLMLITLGVAIARLKPGGILRATALSAV KLVICTGVAWYIGDAFELDRIALGVLVLQVATPVAVTSYMLAEKYGADAEEVAGLVVA STLMSVAALPLLLGFLL" gene 30714..31298 /locus_tag="RD1_0031" /db_xref="GeneID:4195720" CDS 30714..31298 /locus_tag="RD1_0031" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="YP_680457.1" /db_xref="GI:110677450" /db_xref="GeneID:4195720" /translation="MSRTLRAMAILLLVASCGGVSSTAPRNLNDACSIAEQRPEYMRA FQRTQQKWGVPVHVQMATMHQESRFIGNAKTPHKYALGVIPMGRVSSAYGYSQALDGT WSDYQRATGKRLARRDRIRDASDFMGWYMNISQQRNGIPLHDARNQYLAYHEGHTGYA RGSYNRKSWLLNVADKVDARADLYQAQLATCNLR" gene complement(31304..31864) /gene="lolA" /locus_tag="RD1_0032" /db_xref="GeneID:4195721" CDS complement(31304..31864) /gene="lolA" /locus_tag="RD1_0032" /codon_start=1 /transl_table=11 /product="outer membrane lipoprotein carrier protein, putative" /protein_id="YP_680458.1" /db_xref="GI:110677451" /db_xref="GeneID:4195721" /translation="MIPVASAAAEQLKLAEISAYLNSLETLKGTFRQINDDGSVSTGQ LYIRRPGRMRFEYDPPEQALVIAAASAVVIIDRKSNQPSETYPLSRTPLSLLLGRDID LTRAAMVRNARFDGTATIVTAEDPDNLENGFLEMYFTDQPTRLEQWVIHDASGAQTRV ILDAFETGMELPNSLFDADREKGRDR" gene complement(32002..34818) /gene="ftsK" /locus_tag="RD1_0033" /db_xref="GeneID:4195722" CDS complement(32002..34818) /gene="ftsK" /locus_tag="RD1_0033" /codon_start=1 /transl_table=11 /product="cell division protein FtsK" /protein_id="YP_680459.1" /db_xref="GI:110677452" /db_xref="GeneID:4195722" /translation="MKGKKGMAFQTRGRDPLFDSNMAEAMEKRGKELFGLVLMVLGAM ACAMIASYTPDDPNWMVSTDATVQNWMGRIGASIAAPLFMIVGWGSWGIGIVLVAWGL RFALHAGAERALGRLIFAPIAIALGSIYAATLTPAGNWLDIHSFGLGGLFGDTVMGAI LTLLPVGSTVTVKLMSLLMAIGIIVFGGFVLGFTRAEVARIGRFLLMGLVMLYAGVMT LLGRSAQGAVSTAQELAARRAERRAQAEEMAALAQTEVAPLPDNMMFETAETQPKTGL FARMPSLVRRPDAMPEPELVAQPDAPDVEEGPGEDRIKARIADVIKSRVRSSTAVHVP ATAPLTRGRGRGPDPLVLDTTPVVRPEPPLTARHAKPPAPEIEVEDTASFDMPEPRVD EVIEIPRPAPRRVVQQPVRKPVQPSRRAQAEAQPTLSFDDTHPGFELPPLNLLENPID VPRLHLSDEALEENARMLESVLDDYGVKGEIVAVRPGPVVTMYELEPAPGLKASRVIG LADDIARSMAALSARVSTVPGRSVIGIELPNDTREKVVLREILSARDFGDTNMRLPLA LGKDIGGDPIVANLAKMPHLLIAGTTGSGKSVAINTMILSLLYKLTPQECRMIMIDPK MLELSVYDGIPHLLSPVVTDPKKAVVALKWVVGEMEERYRKMSKMGVRNIEGYNGRVR EALSKGEMFSRTVQTGFDEETGEPIFETEENTPVALPYIVVIVDEMADLMMVAGKEIE ACIQRLAQMARASGIHLIMATQRPSVDVITGTIKANFPTRISFQVTSKIDSRTILGEM GAEQLLGMGDMLYMAGGAKITRCHGPFVSDEEVEEIVNHLKAYGEPDYVNGVVEGPSE DAESNIDAVLGLGGNTDGEDALYDTAVQVVLKDRKCSTSYIQRKLAIGYNKAARLVEQ MEDQGLVSPANHVGKREILVPEQG" gene complement(34824..36002) /locus_tag="RD1_0034" /db_xref="GeneID:4195723" CDS complement(34824..36002) /locus_tag="RD1_0034" /codon_start=1 /transl_table=11 /product="aminotransferase, putative" /protein_id="YP_680460.1" /db_xref="GI:110677453" /db_xref="GeneID:4195723" /translation="MYPERFSNLPAHAWPRLRALLDVHEGGGVPVHMTIGEPKHLFPQ WVMEVINEHSAGFNSYPPNDGAPELRQAIASFVQRRYGVPVDADTQVMALNGTREGLY NAVMALCPETKNGQRPAVLMPNPFYQVYMIAALSVGADPVMVPATIENGHLPDFSSLS EETLNRTTAAYICSPANPQGAVASAEYWRDLMGLAERYDFKVFADECYSEIYRGAPPV GALQVAQDIGADPDRVVIFHSLSKRSNLPGLRSGFVASGAKNIAEIKQLRNYAGAPLP LPLQMAAAAVWNDEAHVHENRALYVEKYEIADRILGNVPGYASPDAGFFLWLPVENDE RAAVKLWRETGVRVLPGGYLAQDWEGVNPGQGYIRAAMVAPKAETERGIQMIRDCLYP " gene complement(36111..37439) /locus_tag="RD1_0035" /db_xref="GeneID:4195724" CDS complement(36111..37439) /locus_tag="RD1_0035" /codon_start=1 /transl_table=11 /product="amidase, putative" /protein_id="YP_680461.1" /db_xref="GI:110677454" /db_xref="GeneID:4195724" /translation="MQAWLKLTAADLGRGITAGEIDPVDLTQTYLDAISVYPLRDRIY ARVTPERALHEAAAARGRARSGQRRSPLDGVPISWKDLFDSAGVATEAGSLLLKNRVP ERDAKVLQNATAAGLVCLGKTHMSELAFSGLGYNPSTATPPCINDDGAVPGGSSSGAA ASVAFDLAAVGVGSDTGGSVRIPAAWNDLVGLKTTSGRLSNDGVVPLAARFDTVGPLC RSVEDAALMLAVLQGGRAADLSGASLTGRRLAVLNTVAMEDLRSGPAEAFSAAVSKLE LAGAQVEEIHIDAVNDAMALTTCLYTAEAYGLWRDVIEANPDAMYEEILKRFRLGQNH SGPDYVAAWAALEAARVSYHQATAGFDAVILPTAPILPPNLNRLNTDHDYYVTENLMS LRNTRIGNLMGLCALSLPTDTPSCGLMLMAPPHREEALLRLGTAAEQALA" gene 37491..38753 /gene="ubiH" /locus_tag="RD1_0036" /db_xref="GeneID:4195725" CDS 37491..38753 /gene="ubiH" /locus_tag="RD1_0036" /EC_number="1.14.13.-" /codon_start=1 /transl_table=11 /product="2-octaprenyl-6-methoxyphenol hydroxylase" /protein_id="YP_680462.1" /db_xref="GI:110677455" /db_xref="GeneID:4195725" /translation="MDNPPAPAIFRHMAFDSDILIVGGGLNGPTLALALAQAGHSVTM IDAVPLGSRKSPGFDGRCYAMALTSTRLLEAVGIWETLEPDAQPMLDIKVTDGRAGEG PSPFFMHFDHAEIEEGPMGYMVEDRHLRPALLSASDAHENIQTLHGETVVSQSAEAGS VSVTLASGRVLTGRLLVGCDGRGSGTAMRAGIKRTGWDYGQTALVCAVEHALPHHGVA HQFFMPPGPLAILPLTGNRSSIVWSETAENAALINEMPDEAYIDVLKPRFGSFLGDIT RVGTRYTYPLSLSLANTLVAPRVVLVGDAAHGVHPIAGQGLNAGVRDIAALAEVVTDA KRRGEDIGAEGVLSRYQEWRRFDNTTLALATDTFNRLFSNDNPVLRAVRDIGMGIVGN MPALRRSFIREAAGLTGDLPKLLKGQRL" gene complement(38853..39038) /locus_tag="RD1_0037" /db_xref="GeneID:4195726" CDS complement(38853..39038) /locus_tag="RD1_0037" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680463.1" /db_xref="GI:110677456" /db_xref="GeneID:4195726" /translation="MSETEVVFDRRMLEALICPRSHETLKYDQERQELISETANLAYP IRNGIPVMLIDEARVLD" gene complement(39035..39679) /gene="lonD" /locus_tag="RD1_0038" /db_xref="GeneID:4195727" CDS complement(39035..39679) /gene="lonD" /locus_tag="RD1_0038" /EC_number="3.4.21.53" /codon_start=1 /transl_table=11 /product="ATP-dependent protease La domain protein, putative" /protein_id="YP_680464.1" /db_xref="GI:110677457" /db_xref="GeneID:4195727" /translation="MIKASELPDTIAIFPLGGALLLPRSRLPLHIFEPRYLQMLEDAL KTRERLIGMIQPNEVPGRGGTGLHTIGCAGRIMQFSETEDGRYLITLAGVSRFRVVKE IEGFTPYRRCDVVWDGFDRDLGPDETDTAFQRQGFLKLLERYFDARQLSADWETLKEA DDELLVNSLSMMLDFDPEDKQALLEAPSLTTRRETLVTLMEYQLRGGQESEMMQ" gene complement(39707..40624) /gene="trx" /locus_tag="RD1_0039" /db_xref="GeneID:4195728" CDS complement(39707..40624) /gene="trx" /locus_tag="RD1_0039" /codon_start=1 /transl_table=11 /product="thioredoxin, putative" /protein_id="YP_680465.1" /db_xref="GI:110677458" /db_xref="GeneID:4195728" /translation="MMDLNLGAAPAADDLIKDTTEATFMADVVDTSQTVPVIVDFWAP WCGPCKTLGPQLEAAVRAAKGAVKMVKINVDEAQMIAGQLQIQSIPTVYAFSKGQPID GFQGALPESEIKAFVDRVVKATGGEAPGDGLADAVAAAEEMLAEGAAADAAQTFAAVL GEDEKHAAAYGGMVRAHIAMGELDQAEAILNGAPAEISKAPELEAAFAQLELARQAEG AGPVDELKAAVAADPDNNQARFDLAQALHANGDVEGGVAELLELFRRDQEWNDGAAKA QLFTIFEALKPNDPIVLNGRRKLSSIIFA" gene complement(40679..41467) /gene="xth" /locus_tag="RD1_0041" /db_xref="GeneID:4195729" CDS complement(40679..41467) /gene="xth" /locus_tag="RD1_0041" /EC_number="3.1.11.2" /codon_start=1 /transl_table=11 /product="exodeoxyribonuclease III, putative" /protein_id="YP_680466.1" /db_xref="GI:110677459" /db_xref="GeneID:4195729" /translation="MAFSLATWNINSVRLREALVLKLMTEELPDVLCLQECKSPVDKM PLEAFAAAGYGHVVARGQKGYNGVAILSKIPMQEAAAEDFAGLGHARHIAGRLENGVT VHNFYVPAGGDVADREVNEKFGQKLDYLTEMRDWFHAQKPEKSILVGDLNIAPREDDV WDHKKLLKVVSHTPIEVEHLAQTQDAGGWVDITRQDIPEGRLYSWWSYRAADWDAADK GRRLDHVWATSDIAAAGHDSRILRGARGWEKPSDHAPVFAQFDL" gene complement(41728..42414) /gene="mtrA" /locus_tag="RD1_0042" /db_xref="GeneID:4195730" CDS complement(41728..42414) /gene="mtrA" /locus_tag="RD1_0042" /codon_start=1 /transl_table=11 /product="DNA-binding response regulator, putative" /protein_id="YP_680467.1" /db_xref="GI:110677460" /db_xref="GeneID:4195730" /translation="MAQLKKILLVDDDDDLRDALSEQLIMTEDFDVFEAANGADAMVR AKEALYDLVILDVGLPDTDGRELCRLMRKQGVKSPILMLTGHDSDADTILGLDAGAND YVSKPFKFPVLLARIRAQLRQHEQSEDAVFQLGPYTFKPAMKTLITEDEKKIRLTEKE TNILKFLYRSTEGVVARDVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSNARLLV TESGGYRLMA" gene 42577..43665 /gene="ribA" /locus_tag="RD1_0043" /db_xref="GeneID:4195731" CDS 42577..43665 /gene="ribA" /locus_tag="RD1_0043" /EC_number="3.5.4.25" /codon_start=1 /transl_table=11 /product="GTP cyclohydrolase II" /protein_id="YP_680468.1" /db_xref="GI:110677461" /db_xref="GeneID:4195731" /translation="MSFSPDQNELIARARADLRMGVPVVIDGATPLLAAPVETLNAAR LGDVMALSQDAVLVITARRAATLKAAAYDGDLARVKLSPDATLAWVNGVADPAGDLMN PMKGPLACARGGDAETHRFAIQLAKAARLLPAVVCAPVDNAPAFAQAHNLVCLAAQSG QAMLDASSPLHAVISARLPMEVSEAGRLHVFRPEDGGEEHYAIEIGRPDRAAPLLTRL HSACFTGDLMGSLKCDCGPQLRAALAQMGAEGNGVLLYMNQEGRGIGLANKMRAYSLQ DQGFDTVEANHRLGFEDDERDFRLGAAILKSMGFSKARLLTNNPRKVAMMCENGIDVT ERVPLHVGENAHNHAYLATKVAKSGHLK" gene 43662..44156 /locus_tag="RD1_0044" /db_xref="GeneID:4198487" CDS 43662..44156 /locus_tag="RD1_0044" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680469.1" /db_xref="GI:110677462" /db_xref="GeneID:4198487" /translation="MKPDDMVVTPRGLRFQGQLFPCSIGKTGITRRKKEGDGATPTGI HRIVGMLYRPDRIAKPADWALPIGLNDLWSDDPGHEDYNMMVRAPYSHSHEKLRRADP LYDLVLLTDWNWPYAVKGRGSAIFMHQFRRPGFPTEGCIALSRGNLRRIAPRITLQTR LIVP" gene complement(44164..44820) /locus_tag="RD1_0046" /db_xref="GeneID:4198488" CDS complement(44164..44820) /locus_tag="RD1_0046" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680470.1" /db_xref="GI:110677463" /db_xref="GeneID:4198488" /translation="MMSLSDISQRIEKAVAQAGRDRGSVKLIAVSKVQPNERVEAVLK EGHRCFGENRVQEAAGKWPAFRDDHDGVDLHLIGPLQTNKARQAFDLFQSIHTLDRPK LAKTCARLAQEIGHCPELFVQVNTGEEPQKAGVAPSDADAFIAECRALDLPVRGLMCI PPIDEEASLHFALLAKIAERNGLAGLSMGMSDDFEKAISFGATHIRVGSAIFGARVPA " gene complement(44919..45881) /locus_tag="RD1_0047" /db_xref="GeneID:4198489" CDS complement(44919..45881) /locus_tag="RD1_0047" /codon_start=1 /transl_table=11 /product="outer membrane porin, putative" /protein_id="YP_680471.1" /db_xref="GI:110677464" /db_xref="GeneID:4198489" /translation="MKKILMASTMLVATAGMAAADITFDGFGRFGIVYNDGADDAGDR SDTQLDQRFRLNVVGTTETDGGVEFRARLRLESNDNGDGQGSGGGNVVEAPEFGVRAG GFNVFLGNTSDLIDSGDVVDYYGNGIGLTDFAETSSNFVTGSIISGINGGDEIDPTIK TSYTVGDFTFGASYSDNALDSATEEYQIGAGYKFGNFGVGAAFGNVDGGDFDDTDFWA LSFNGDLGSFAFSLLAADSDDQDSVALGASVAVPVGAATDVRFVVSDNGLDSDDSFAA TKGDDTAYAVGFRHSLGGGVRLQGGIGENSLGDTVGDLGVIFNF" gene 46129..46620 /locus_tag="RD1_0048" /db_xref="GeneID:4198490" CDS 46129..46620 /locus_tag="RD1_0048" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680472.1" /db_xref="GI:110677465" /db_xref="GeneID:4198490" /translation="MQKIWVTQIITGMAVAAALSGCGVATPSNAVIGPQAGDNFTSQR DRNRSSGTTIWDAFRAGGGEQTVAVNKYLWAASLEVLNFLPVESVDPFTGVIITGFGT PPGSGRAYRATILIDDPALDARSLNVSLQTRNGPASAPAVQAVENAILSRARQLRIAD DAL" gene 46734..49280 /gene="leuS" /locus_tag="RD1_0049" /db_xref="GeneID:4198491" CDS 46734..49280 /gene="leuS" /locus_tag="RD1_0049" /EC_number="6.1.1.4" /note="leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-" /codon_start=1 /transl_table=11 /product="leucyl-tRNA synthetase" /protein_id="YP_680473.1" /db_xref="GI:110677466" /db_xref="GeneID:4198491" /translation="MTRYTPAEIEARWQKAWRENEVFKAIRSADKPKYYVLEMFPYPS GRIHMGHVRNYTMGDVIARYKLATGHNVLHPMGWDAFGMPAENAAMAIGGHPKDWTYG NIKDMRDQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLEAGLVYRKNAIVNWDPV DMTVLANEQVEQGRGWRSGALVERRELTQWFFKISDHSEELLSALDTLENWPAKVRLM QENWIGKSRGLQFAFSTIDGPDGHDRIEVYTTRPDTLLGASFVGISPDHPLAKLLERD NDNVAAFCAECRKGGTTEEAIETAEKLGFDTGLRVRHPFDTAAELPVYIANFILMDYG TGAIFGCPAHDQRDFEFATKYDLPIISTFLPSQDADEVLSEAFVPAKTEKVFYNRGFA GAEFQTGLEAIDAAIDFCESNGIGQGVTKYRLRDWGLSRQRYWGCPIPVVHCDDCGVV PEKKENLPIELPYDVSFDTPGNPLNRHPTWRDTPCPACGKPAQRETDTMDTFVDSSWY FARFTAPRAETPTVMEDAQYWMNVDQYIGGIEHAILHLLYSRFFARAMQMTGHLPQSA IEPFDALFTQGMVTHEIYQTRDANGRPVYHLPEDVTDGRLADGTEVEIIPSAKMSKSK KNVVDPLGIIASYGADTARWFVLSDSPPERDVEWTASGAEAAFKHLTRVWTLSERIGK MDKDAAGQGDEDLLRAMHVCIHDVTMGIESFGFNAAIAKLYAFTAKLQKSKAGYGAQR TAIMTLAQLMSPMTPHLAEDIWAHQGGDGLVTTAPWPRADEAMLVSDTVTLPVQINGK RRAEIVISADLSKEEVEKIALADPAVIRSLNGATPKKIIVVPGRIVNVVV" gene 49267..49746 /locus_tag="RD1_0050" /db_xref="GeneID:4198492" CDS 49267..49746 /locus_tag="RD1_0050" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="YP_680474.1" /db_xref="GI:110677467" /db_xref="GeneID:4198492" /translation="MSSYSRRSLLFLPLALGACGFAPVYGTGSTGSALQNAVEVSDPN DVDGYLVVRRLEERLGRAAQPTYKLTLAVDSKREALAVNRNSNINRYNIVGTANYVLV EQATGRVVTSGSVDNFTGSSATGTTVATLAAERDARERLMSLLADQIVVRLLSTDLT" gene 49743..50744 /locus_tag="RD1_0052" /db_xref="GeneID:4198493" CDS 49743..50744 /locus_tag="RD1_0052" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680475.1" /db_xref="GI:110677468" /db_xref="GeneID:4198493" /translation="MKLSTRDAVSYFARPDPDKTGILIYGADAMRVALKRQQLLAALL GKEAEEEMRLTRLNGGDLRKDPALLLDAVKAVGFFPGPRAAFVQEANENTAPAILTAL ADWQPGDAQIIVTAGALKPTSKLRKAFEAHPNAYAAGIYDNPPTRAEIETTLAETGLA LPTGDVMAALSDLAQAIDPGDFRQTIEKLALYKLHDPAPISLQDIAACAPTSTEADVD DVLMVVAEARAHEIGPMMQKLIAQGANPVGLCIGAMRHFRALHRAACDTSGRPTIFGP NRDRMLAQSRKWGAAKLETALTVLMDTDLQLRSAGQHAPGMALVERAFIRLAMLAPR" gene 50763..51347 /locus_tag="RD1_0053" /db_xref="GeneID:4198494" CDS 50763..51347 /locus_tag="RD1_0053" /codon_start=1 /transl_table=11 /product="glutathione S-transferase family protein" /protein_id="YP_680476.1" /db_xref="GI:110677469" /db_xref="GeneID:4198494" /translation="MYTVIGPVKSRAMRVLWMLEELGEAYNHIDAAPRSDAARTYNPS GKVPALLDGTEVLTDSMAILTYLADKHGKLTAPAGTIARARQDAMTFWLLDEFDAILW AAAKHSFVLPQEQRMPAVKDSLKAEFSASADQLAAKLDGPFLMGDQLTVPDILACHCL NWAVGAGFPRVDDRLFAYGKNLRQRPAFQAAAAR" gene complement(51326..52510) /locus_tag="RD1_0054" /db_xref="GeneID:4198495" CDS complement(51326..52510) /locus_tag="RD1_0054" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680477.1" /db_xref="GI:110677470" /db_xref="GeneID:4198495" /translation="MSTALVIGAGPAGLMAAETLSAAGHRVIICDAKPSVGRKFLMAG KSGLNLTKDEAFAPFMRHYFEAEAPLRPMIARFDAQAVQDWARGLGQDLFTGSTGRVF PKAMKASPLLRAWLARLDAAGVERRTGWRWLGWDQEAALFETPAGAQKLTADVTVLAT GGASWARLGSDGAWADAVGAQGCALTPFAPSNAAVSIRWSDHMAPHFGVALKSVAWQA GSMSSRGEAAITQTGLEGGGVYSLTPALRAGAPLFVDLAPDRTAEKLAAELAGKSGKL RLAHWLRNTLRLSPAKIAFFFEMTAAGRPSREAWVATLKKLAVRYDGLRPMDEAISTA GGVPFAAMDDRLMLKSRPGVFCAGEMIDWEAPTGGYLITACLATGRWAGRGAVDYLAA AA" gene complement(52507..53841) /locus_tag="RD1_0055" /db_xref="GeneID:4198496" CDS complement(52507..53841) /locus_tag="RD1_0055" /codon_start=1 /transl_table=11 /product="mechanosensitive ion channel family protein, putative" /protein_id="YP_680478.1" /db_xref="GI:110677471" /db_xref="GeneID:4198496" /translation="MEFDLTGQPEIVQLAAGYALQIWEIAKSWALSPAAWSQFALLVL AYVLAVIAAARLRGTLTRLLTPAAEAESIIARSRRTVLMFLPLLLPLLAYVFTAVGES VVRSIFDSGAVIAFGKRVFLFLAVRTLVRDIISDPLLKLLGKYVLIPIAAIYALGLLD AVSAKLTETTISLGNISFSVMSLIRGLIAGSVLFWLGGWSNRQSAQFIESQQDMRPSL RQLIAKVVEFSIFGIAFLLLMNIMGINLSTLAFIGGAVGVGLGFGLQKIASNFISGVI LLIEGQATVGDYVELDGGESGRIVKMTARAAILETFDGRWIVVPNEDFITTRVVNYSD SGSANRYEAPFSVSYDTDINRVPALIEAAVATHPGVLNEPYPPDCELRGFGDSGIDFA VEFWVNGFDDGPNKFTSDVLFLIWNTLKENDIEIPYPQRVVEIKGGVPDLAS" gene complement(53945..55948) /locus_tag="RD1_0056" /db_xref="GeneID:4198497" CDS complement(53945..55948) /locus_tag="RD1_0056" /codon_start=1 /transl_table=11 /product="hydantoinase/oxoprolinase, putative" /protein_id="YP_680479.1" /db_xref="GI:110677472" /db_xref="GeneID:4198497" /translation="MPILLGVDTGGTYTDAVLIRDEKEVIATAKSLTTRHDLAEGIGA AVRAVLRDGAVAPADVSMASLSTTLATNALVEGQGGRIALILIGFQERDLDTHGLRDA LKGDPVLICSGGHDHAGAEVAALDLEQVRQFLRGQAKDVSAFAVAAQFATRNPAHELE VAALIGEVTGRPVSASHALSAKLNGPKRAMTALLNARLVGMIDRLIGRAEDMLRALGI TAPMMVVRGDGALISALQARHHPIETILSGPAASLVGARWLTGAQDALVSDIGGTTTD IALLRNGRPAIDPAGARVGPYRTMVEAVAMRTTGLGGDSAVEMVSGGLARAITLGPRR VIPVSLMAHHAPEVVHAALDAALRAAAPGEHDARFVQAVRGQSTEGLGARETTLLDRI GTGIHPLGAVLRARLEHSALNRLVERGLVQLGGVTPSDASHVLGTLADWDAEAARKAL VLLARRRSGAGEMLARTAQDMAQMIVDQLTQQTVTALLEAAFAEENADFGGAAGDLAR HGLMQAGLRAHRGLLRFDAALDVPIVGLGASAQTYYPAVGRAVRSEMVLPAHAGVANA IGAVVGRVTMRRAGSVTAPSDGMFRVHFDSGPQDFTDCDAALVALEAWLTERARADAA QAGAADIQISVTRDIKTAGVEAREVFVEAMITVEAAGRPRVAV" gene complement(56013..57056) /locus_tag="RD1_0057" /db_xref="GeneID:4198498" CDS complement(56013..57056) /locus_tag="RD1_0057" /codon_start=1 /transl_table=11 /product="4Fe-4S binding domain protein, putative" /protein_id="YP_680480.1" /db_xref="GI:110677473" /db_xref="GeneID:4198498" /translation="MSGLKEKLVARALEEGFIACRICRPDAVPDVAARLKAFVDAGHH GQMTWMADRIHWRGDPTQLWPQARSVIMLAESYGPEHDPMAVLQQPERGAISVYAQGR DYHDVVKKRLKRLARWLMAEAADADLQVKVFVDTAPVPEKALGQAAGLGWQGKHTNLL SREWGNWAFLGAVFTTLDIAPDAPEVDHCGSCRACLDVCPTDAFPAPYQLDARRCISY LTIEHKGPVPTDLRPLLGNRIYGCDDCLAVCPWNKFATTARDMRLSARPELTAPRLAD LAALDDAAFRALFSGSAVKRIGRNRFVRNVLYAIGNSGEASLRQTASELMDDPDDAVA DAARWAVAQLGRK" gene complement(57069..57734) /locus_tag="RD1_0058" /db_xref="GeneID:4198499" CDS complement(57069..57734) /locus_tag="RD1_0058" /codon_start=1 /transl_table=11 /product="glutathione S-transferase domain protein" /protein_id="YP_680481.1" /db_xref="GI:110677474" /db_xref="GeneID:4198499" /translation="MARLFHVPLSPFCRKVRLSLAEKKIDVELVEERYWEEDPEFMRR NPAGKVPVLKIDGVIMAESAAICEYIEETRPDPSLMPKDAIARAEVRRLVGWFDDKFH HEVTSKLLYERVNKKMMKLGYPDSKNVKAGSKAIKYHLDYMTWLLDHRRWLAGDSMTL ADFAAAAHLSALDYNSDVDWNRSEVVKDWYAKIKSRPAFRNILADQVPGFPPAKHYND LDF" gene complement(57790..58455) /gene="mtgA" /locus_tag="RD1_0059" /db_xref="GeneID:4198500" CDS complement(57790..58455) /gene="mtgA" /locus_tag="RD1_0059" /EC_number="2.4.2.-" /codon_start=1 /transl_table=11 /product="monofunctional biosynthetic peptidoglycan transglycosylase" /protein_id="YP_680482.1" /db_xref="GI:110677475" /db_xref="GeneID:4198500" /translation="MRKVLRIAVRVGLVVVALGLLVMFLGRFVPPWTTPYMFAEGRKL GGVSYEWVALEDVAPVMARSVVAAEDANFCTHWGFDMVAIREAIEDGGTRGASTLSQQ TVKNLYLWHGRNYTRKAAEALLTPVLEGLWPKRRIIEVYLNIAEFDTGVFGVKAAAAH YFGVSPDALSATQAARLAAILPSPKTRSASRPSDFVRKRARAIIDGAATIRRDGRAAC FES" gene complement(58565..63094) /gene="gltB" /locus_tag="RD1_0060" /db_xref="GeneID:4198501" CDS complement(58565..63094) /gene="gltB" /locus_tag="RD1_0060" /EC_number="1.4.1.13" /codon_start=1 /transl_table=11 /product="glutamate synthase, large subunit" /protein_id="YP_680483.1" /db_xref="GI:110677476" /db_xref="GeneID:4198501" /translation="MTYDDAWVAREEAKRAYMAENGLYSEAEEHSSCGVGLVVSVDGK PSREVVENGIKALKAIWHRGAVDADGKTGDGAGIHVQIPAPFFYDQVRRTGHQPKTEL LMAVGQVFLPRTDFAAQETCRTIVETEVLRMGYYIYGWRHVPVNISVLGEKANATRPE IEQILISNIKGVDEETFERELYVIRRRIEKAAAAAQVPSLYIASLSCRSIIYKGMMLA EQVAEFYPDLMDERFESAFAIYHQRYSTNTFPQWWLAQPFRMLAHNGEINTLKGNLNW MKSHEIRMASSTFGEMAEDIKPIVPAGSSDSAALDAVFEVLVRAGRSAPMAKTMLVPE SWSKQAVELPQSWRDMYSYCNSVMEPWDGPAALAMTDGRWVCAGLDRNGLRPMRYVVT NDGMLIAGSEAGMVPLNEANVVEKGALGPGQILAVDMHEGRLFHDTEIKDKLASNQPF GEWVGKIKDLDEALTGVTETTIFAGNELRRRQVAAGYSIEEIEQILAPMVEDAKESLA SMGDDTPSAVLSKQYRPLSHFFRQNFSQVTNPPIDSLREYRVMSLKTRFGNLKNVLDE DSSQTEIITLDSPFVGNAQFDTLVSHFNAELVEIDCTFEAGRGNLDAGLKRIRAEAED AVRSGAGHIVLTDHMSDATKVGMPMILATSAVHSHLVRQGLRTFCSLNVRSAECIDPH YFAVLIGAGATIVNAYLAEDTVADRIERGLIDGTLTEAVARYRYAIDQGLLKIMAKMG ISVISSYRGGLNFEAVGLSRAMCAEYFPGMTSRISGIGIHGIQHKVEEVHAKGWAGAG SVLPIGGFYKARKSGETHAWEATSMHMMQTACNTASYAMWKQYSAKMQSNPPIHLRDL LDIKPLGKPVPLEEVESITSIRKRFVTPGMSLGALSPEAHKTLNVAMNRIGAKSDSGE GGEDPAHFVPEPNGDNPSAKIKQVASGRFGVTAEYLNQCEELEIKVAQGAKPGEGGQL PGMKVTDLIARLRHSTKGVTLISPPPHHDIYSIEDLAQLIYDLKQINPRCKVTVKLVA SSGVGTIAAGVAKAKADVILISGHNGGTGASPATSIKYAGLPWEMGLTEAHQVLAMNN LRDRVTLRTDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQCQSNTCPVGVC TQDEALREKFTGNADKVVNLITFYASEVREILAQIGARSLDDVIGRADLLTQVSRGSA HLDDLDLNPLLITVDGAADIVYDRARARNAVPDTLDAEIVRDAQRFLEDGEKMQLSYA IQNTHRTVGTRTSSHIVKKFGMRNNLQPDHLTVKLSGSAGQSLGAFAAPGLKLEVSGD ANDYVGKGLSGGRIVVRPPMASPIVAGENTIIGNTVLYGATDGYLFAAGRAGERFAVR NSGAKVVIEGCGSNGCEYMTGGVAVIVGDIGANFGAGMTGGMAYLYDPEGKAPALMNM ETLVTCPVGEGHWMAELRGLLEMHLAETNSRRVGDILQHWDIEKQHFLQVCPKEMLVH LPAPLALEEGAIPAE" gene complement(63091..63525) /locus_tag="RD1_0061" /db_xref="GeneID:4198502" CDS complement(63091..63525) /locus_tag="RD1_0061" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680484.1" /db_xref="GI:110677477" /db_xref="GeneID:4198502" /translation="MSTDHLTGQCLCGAVQITVAGAHDPRPGACHCRMCQRWNGGVFM CFEAQAEAVTVTGDVARYASSDFSQRAFCPRCGSHLWMRDTDTPGTAYELMPGLFDAA RGWDVRSEIYVDGAMATLTGDHPRATGAAYEAKNRFVEGDVK" gene complement(63522..63956) /locus_tag="RD1_0062" /db_xref="GeneID:4198503" CDS complement(63522..63956) /locus_tag="RD1_0062" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680485.1" /db_xref="GI:110677478" /db_xref="GeneID:4198503" /translation="MGDRQKIDGQCLCGAVQIAAVIDAPTLVACHCGMCQRQNGGPYI SIMTEQAGTEASGPIKVFKSSDWAERAFCGTCGSTLWYGTLHDGARYLSSGLFPDAAG APLTLEYFSDNCPQGYAFSGDHRRMTEAETIAAFTEGGEPGA" gene complement(64087..65520) /gene="gltD" /locus_tag="RD1_0063" /db_xref="GeneID:4198504" CDS complement(64087..65520) /gene="gltD" /locus_tag="RD1_0063" /EC_number="1.4.1.13" /note="function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain" /codon_start=1 /transl_table=11 /product="putative oxidoreductase" /protein_id="YP_680486.1" /db_xref="GI:110677479" /db_xref="GeneID:4198504" /translation="MASQQMLKFVTVERGMPEKREADVRREDFKEIYAEYADAKAKEQ SSRCSQCGVPYCQTHCPLHNNIPDWLRLTAEGRLREAYEVSQATNTFPEICGRICPQD RLCEGNCVIEQSGHGTVTIGAVEKYITDTAWEEGWVLPIAPAQERTESVGIIGAGPGG LAAADVLRRAGVQVTVYDRYDRAGGLLTYGIPGFKLEKDVVMRRNKQLELGGITFELN CTVGEDISFEDIRARHDAVIIATGVYKSREIEAPGVGAQGLVRAIDFLTASNRKSFGD AVPEFDDGTLNAEGKRVVVIGGGDTAMDCVRTSVRQGATSVKCLYRRDRANMPGSQRE VQNAEEEGVVFEWLSAPKGFVGDPVTGVMVQKMRLGAPDATGRQAPEVIEGADYVEEA DIVIMALGFEPEDLPALWDQPELPVTRWGTIKAAFTTGETDLEGVYAVGDIVRGASLV VWAIRDGRDCAEAILQKLDAGAQIAAE" gene 65746..66549 /gene="uppP" /locus_tag="RD1_0064" /db_xref="GeneID:4198505" CDS 65746..66549 /gene="uppP" /locus_tag="RD1_0064" /EC_number="3.6.1.27" /codon_start=1 /transl_table=11 /product="undecaprenyl-diphosphatase, putative" /protein_id="YP_680487.1" /db_xref="GI:110677480" /db_xref="GeneID:4198505" /translation="MTLFHLILVAAIQGLTEFLPVSSSGHLVLLPALTGQPDQGLAID VAVHVGSLLAVILYFWSDVRIAATGSLRLARGKVDTQGAFLALCLIIATIPVMIAGLI IKLTGLDEMMRSVAVIGWTMLGFGLVLYWADRTGASTRTASGWTLKDAFLMGLAQILS LIPGTSRSGITITAARRLGYEREGAAKLAMLMSIPTIIASGAVLGADVIGEADWQMAR DGALAAALAFVSALLALALMMRLLKSVSFTPYVVYRVILGLILLVYAYS" gene complement(66546..67529) /locus_tag="RD1_0065" /db_xref="GeneID:4198506" CDS complement(66546..67529) /locus_tag="RD1_0065" /EC_number="1.6.5.3" /codon_start=1 /transl_table=11 /product="NADH-ubiquinone oxidoreductase, putative" /protein_id="YP_680488.1" /db_xref="GI:110677481" /db_xref="GeneID:4198506" /translation="MSKLVTIYGGSGFVGRYIARRMAKAGWRVRVAVRRPNEAMFVKP YGVVGQVEPVLCNVRDDASVRHVMMGADAVVNCVGILAEDSKNTFDTVQAEGAERIAR IAAQEGVARMVHISAIGADAHSDSDYARTKALGEAGVLQHMPSAVILRPSIVFGPEDQ FFNRFADMAKLGPVLPVVGAETRFQPVYVDDVAQAAEKALTETVAPGVYELGGPDVCS FRALMELMLETIHKRRLIVNIPFFAARIMGFTFDMIQKASLGLIRNGMITRDQVKNLA RDNVVGEGQRGFDALGIEPVTMVSVLPEYLWRFRPSGQYDAIKKSAKNLRS" gene 67695..67780 /locus_tag="RD1_0066" /db_xref="GeneID:4198312" tRNA 67695..67780 /locus_tag="RD1_0066" /product="tRNA-Leu" /db_xref="GeneID:4198312" gene complement(68288..69538) /locus_tag="RD1_0067" /db_xref="GeneID:4198313" CDS complement(68288..69538) /locus_tag="RD1_0067" /codon_start=1 /transl_table=11 /product="sulfatase, putative" /protein_id="YP_680489.1" /db_xref="GI:110677482" /db_xref="GeneID:4198313" /translation="MGLSNEDPTLANMMKSLGYTTGQFGKNHLGDQNQFLPTTKGFDE YWVWLYHLNAMEYTSDPDWSDDPEFEAQYGPRNVIHAFATEEMDDTVDPRWGLVGNQR IVDDGPAPPERQKTLDDEVTARTLDFIDRAVESETPFFVWMAPARAHVWTHLSPEYEA MLGNGRGLQDVVMKELDDNVGKVLARLEALNISDNTIVVFTSDNGPETMTWPDGGTTP FYGEKGTTWEGGFRVPAIIKWPGKVPEGRVANGIFSGMDWMPTLVAAAGGPDNLPEVM LEGYEGYNVHLDSYNQLPYLLGGEESQRDEIVYYEGTSLQAIHYRDWKAHFVVQHHGW AGPKDELNAPLLFNLRRDPYEKAAEESGMYTIWMGKKMWAFGPAARLVQGHLQSFQAF PPRGAVVDNQDKVEKQVTTEGGMS" gene complement(69950..70813) /locus_tag="RD1_0068" /db_xref="GeneID:4198314" CDS complement(69950..70813) /locus_tag="RD1_0068" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680490.1" /db_xref="GI:110677483" /db_xref="GeneID:4198314" /translation="MHRFLTRALAWMFALTAMIAMAARADQAEVDELFTSVQAAVAAQ GLNPVIEIDHARLAAAEGVEMPASRVQLFSDSAINASLMLENIRAGLDLPFRVLAFDQ NGSTSLTYTSSAFLSQRHGLTDARALAAFDARLNDLVAHSERARVAPVPTLDVGPDFG IVELRSRYDVPETVARLKAAVTAQPDTIWFGEIDFQVEAAQLGISLVASRLLLFGGPA PGGVAMAEYPAIGLDAFCQKVFVYAGDDGNAVVIYNDIAALAKLHYGTSIDPHRMLNK RLRATFTPATE" gene complement(70868..72958) /locus_tag="RD1_0069" /db_xref="GeneID:4198315" CDS complement(70868..72958) /locus_tag="RD1_0069" /codon_start=1 /transl_table=11 /product="mechanosensitive ion channel protein, putative" /protein_id="YP_680491.1" /db_xref="GI:110677484" /db_xref="GeneID:4198315" /translation="MSEGWPTASADDTPPKPLPRPSIGQSMTETRIEIVVTGGNAEAT IDQLASQLQDSEAVVSGADTAAQPAELIASSISASAALPQNINAWFAQIAVSEGYQPL ATLAICAVIFAIAYLLERVIARLLSGSVSEPVTTLQKLGNATRWGGARGLSLLAFYGM SLVGIHVVFDASTEAFELAAVALSSLMLPRAWLLVLEVLTGSQDPHRRANSLSDLEAS HVMRSALCLVVFFAATAFARDFVLGVVDAGDSGALFAVATRALDAMATGFFFFSVRKP VGGLIVNALSCDTGNPKLFVRLLSRFWPALYIFLFLLQIIAEARGYLSGTLGEDASAL KRSFAVFVLTPFIVASLGIWRDDLMSRTDWDRRGRVAGVFSLLEGTVTVGAAIFILYA WNIDPFATDLEGAKRILPGLVSAAIVTVIGVSAWRMISGFFDKGTVGGADDEANVPDG EGGVGGSRLETVLPILRTALAVLIGTVTVLLALSSLGVQIAPLLAGAGILGLAVGFGA QKIVEDIISGVLYLIEDAFRKGEYIETNEGQGVVDAIMLRSIRLRHHLGAVYTVPFSS IGTVQNHSRDWVTVKLSFEVAPTQDLEKVRKLVKKVGAQLMQDPELEGQFLAPLKSQG AVAMVGSNYKIGVKFTSKPGEQFLIRRKALNAIQKAFSENNVQIAAPRVIVDTGGEAA AAAAKTVIDRAAPA" gene 73014..73127 /locus_tag="RD1_0070" /db_xref="GeneID:4198316" CDS 73014..73127 /locus_tag="RD1_0070" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680492.1" /db_xref="GI:110677485" /db_xref="GeneID:4198316" /translation="MTPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF" gene complement(73785..74429) /locus_tag="RD1_0071" /db_xref="GeneID:4198317" CDS complement(73785..74429) /locus_tag="RD1_0071" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680493.1" /db_xref="GI:110677486" /db_xref="GeneID:4198317" /translation="MSRDSILAKIDAATQTAPLVEIDAQASALIADPDSYRADFAPQP LIARFIEKATSETVTATVEQLASLADIPAAVSHYLTEKELGAKIAVQPRACLRGIDWS GVQITDHAQMNEPIALTIADAGIAETGSLVFFTGPDAPVLLNFLPLHHLAVLRSSTIR PYMEDVFDAFGTTRAKQGRSCNIITGTSGTADIEARNVRGAHGPRFMHILLISE" gene complement(74433..75839) /locus_tag="RD1_0072" /db_xref="GeneID:4198318" CDS complement(74433..75839) /locus_tag="RD1_0072" /codon_start=1 /transl_table=11 /product="4Fe-4S binding domain protein, putative" /protein_id="YP_680494.1" /db_xref="GI:110677487" /db_xref="GeneID:4198318" /translation="MKQTSHQFNENVARALAEPTLKVALDRTTTLLRTRRAKVIDAFP QYAKARETAQKIKDHTLDHLGHYLRQFEENAKANGAQVHWAATPEDARQIVSDICRAQ NAKTATRVKSMLGEEIGIAQALSDAGVERVETDLAEHIIQLADDPPSHIVMPAMHKTH EQVAELFAQKHKDPGDQQDIPSLVESARRELRPKFMNADISISGANFLIADTGSFVTI TNEGNAELTTTPPKTHIVTVGIEKMVPSLKHAAVFIRLLSRAAIGTEITQYTTFYNGP KRDGDRDGPENLHIVLVDNHRSDMLSDFLRPMLRCIRCGACMNHCPVYAAVGGHAYGA VYPGPMGSVLTPAMTGLKGSKDLPNACTLNGRCKEVCPVNIPLPDMLRSLRARQFESG MVTPKARWSLKLWAMLATRPALYHFGTSVANMMLRVLARGRGKISAVPLAGGWTRTRD LPQPEAGTFMQQYRKQKR" gene complement(75850..76620) /locus_tag="RD1_0073" /db_xref="GeneID:4198319" CDS complement(75850..76620) /locus_tag="RD1_0073" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680495.1" /db_xref="GI:110677488" /db_xref="GeneID:4198319" /translation="MTNNDGPHVGFFVTCIVDSMRPNIGFASLKLLEDAGCTVEVPTA QTCCGQPAFNSGDDATTKAIAKQVIEAFEPFGYVVVPSGSCASMIRSHYGELFADDPA WQSRQKALSAKTWEVLSFLTDVMKYTPSATYQGTATYHDSCSGLRDLGVHDQPRALLA HVQGLSVVPLEGNNECCGFGGTFCVKYPELSTAVVTDKTTKIKATQADTLLGGDMGCL MNMAGKLSREGREMRVFHTIEVLADMADGPGICAPRLK" gene complement(76746..78467) /gene="dld" /locus_tag="RD1_0074" /db_xref="GeneID:4198320" CDS complement(76746..78467) /gene="dld" /locus_tag="RD1_0074" /EC_number="1.1.1.28" /note="component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent" /codon_start=1 /transl_table=11 /product="D-lactate dehydrogenase" /protein_id="YP_680496.1" /db_xref="GI:110677489" /db_xref="GeneID:4198320" /translation="MTNDDLIAKLKTIAGARHVLTGDRQTERYRKGFRSGEGEAIAVV IPGSLVEMWEILKACVAADKILIMQAANTGLTEGSTPKGTYDRDVVILSTLRLDRIHL LRDGQQIVSLPGGTLFGLEKQLAPYGRQPHSVIGSSCIGASIMGGVCNNSGGALVQRG PAYTELSLYAQITHEGQLELVNHLGINLGNSPEEILTRIDNGAFSDKDLSDDAGRASD AGYPERVSDVDADSPARFNADPRTLHEASGCAGKLAVFAVRLDTFPIATGEKVYYVGT NDPAQLTELRRRALTELPELPVSGEYLHRECFDIARKYGKDTLLMINWLGTDFLPRIF AMKGAMDARFAKVPFLPANLVDRVMQVVSNILPEALPKRMMDFRARFEHHLILKVSAD SIVGTESILNDTVGADGWFACDPKETKKAMLHRFAAAGAAIRYHAVHPGTTEDILALD IALKRNDRNWVETLPPEIEDQLVAKMYYGHFFCHVFHQDYLVKKGCDPKALKEQMLAL LDTRGAEYPAEHNVGHLYAAKPALANHYKTLDPTNSFNPGIGKTSRERYYGAPCGCGV DHPAAAE" gene 78658..79296 /locus_tag="RD1_0075" /db_xref="GeneID:4198321" CDS 78658..79296 /locus_tag="RD1_0075" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein A" /protein_id="YP_680497.1" /db_xref="GI:110677490" /db_xref="GeneID:4198321" /translation="MTDATKPAPRTDLIICPNCDAVFSLARPGHGEKAVCSRCETVLI TPRRNAGLQIIALSLSIVILISTAAVFPFLSVDAIGIKNSVSILETALVFSDGPLAVL SLTTAALILFIPLLRVMLCLYVIVPLVRDRAPAPYSADAFRVAEALRPWSMAEVFAIG CAVALIKVSALVHVTFGPAFWLFSVLVMLVVVQENIICRWSVWNALSRPRRS" gene 79254..79913 /locus_tag="RD1_0076" /db_xref="GeneID:4198322" CDS 79254..79913 /locus_tag="RD1_0076" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein A" /protein_id="YP_680498.1" /db_xref="GI:110677491" /db_xref="GeneID:4198322" /translation="MVRMERIEPTQKIVTARELGLVGCVRCHQVWPEDTARCGRCGHA LKSRDTKSLQRVWAFWLIGLMCYIPANIYPMLQTRMLFYVQDSTIIGGAVELIEYGSI GIALVILFASVAIPIGKFIAIAFLAISLHRPTTVSNHQRQRLLEIVEYIGRWSMIDIF VVAILSSLVQLQLIVTINPGAASIFFAAAVIFTMISAQSFDSRLIWDQINAQDEKPKN E" gene 79906..81987 /gene="pqiB" /locus_tag="RD1_0077" /db_xref="GeneID:4198323" CDS 79906..81987 /gene="pqiB" /locus_tag="RD1_0077" /codon_start=1 /transl_table=11 /product="paraquat-inducible protein B, putative" /protein_id="YP_680499.1" /db_xref="GI:110677492" /db_xref="GeneID:4198323" /translation="MNDAPPVPIEKEPKSLISNLSIVWIIPALALVTALFVAWQSYNA RGPVITVEFENAAGIVPRETEVRFRDVQVGLVEEVMFSEGLSSVVAKVRLDKSVAPYV DSTASFWIVRPEFSASGISGLDTVLSGVFIQGSWDSTIGPPASAFKGLDRAPLYQTGS ADLQIALRSLPGGTLSADTPILYRGIEIGRVGPARISPEGNFAIAEAVIYEPHGRLIT PSTRFWDASGFSFTIGPAGAEIDFTSVASLLGGGITFDTFVSGGEQVGDGSVFEVFPS ETDARNSVFNASEVDLLEVRVIFDENISGLTLGAPVELSGLRIGSVENLSGVVDPETY GDSRVRLAAVLGIQPARLGLPEEVTPQSALMLLEEQVRNGLRARLASTSILTGGLKVE LVQLPDAPPALVEVFEGSIPRMPTAPSEISDAAASVEGVFTRINRLPIEEVLTSVTDF LRAAENLLTSEDLRAAPQDLRGLLGDIRGVVTSQTVQDIPVTLNVALVRLDGILAQIE EQQGVARILASIDAATSAATAVGTSIEGLPDLVTELAGVAAEAASLPLADLTQQVTDV LASADAVVSAPAMQELPASLAGALDELNRTLAELREGGAVDNVNATLRSTRNAADAVA LSAQDLPDLVDRITQVFDEASATIAGYNRGEVLSRDAQAALRDISQASNAISSLARLL ERNPSALIRGR" gene 81988..82548 /locus_tag="RD1_0078" /db_xref="GeneID:4198324" CDS 81988..82548 /locus_tag="RD1_0078" /codon_start=1 /transl_table=11 /product="lipoprotein, putative" /protein_id="YP_680500.1" /db_xref="GI:110677493" /db_xref="GeneID:4198324" /translation="MRPFPFLLSALICLSACGAASDRYTVTSPQVTQTQTIAFRAVEV RDVSLPAYAADDEITVQTTDGRILSDGGVLWADTPDRAVALELSRYLTQITRARVASA PWPFEALPDARLDVRFETLVAGDDGQYRASGQYFVAVPDGRRERAGLFDLSVPFDPLI GPPAIASARGQIILDLAVFIARNGLR" gene complement(82648..83775) /locus_tag="RD1_0079" /db_xref="GeneID:4198325" CDS complement(82648..83775) /locus_tag="RD1_0079" /codon_start=1 /transl_table=11 /product="aminotransferase, putative" /protein_id="YP_680501.1" /db_xref="GI:110677494" /db_xref="GeneID:4198325" /translation="MKVKIHRLFEYLLESTQSKPEAIVGFSLSASPTLGDFIPDIDPS LSLDWNNRDFRGLPELRAHVLAQAGLNGVCTPSDVLITAGASEANYLAIMQLVEPGDD IVIETPGWPQAEVLAKAKGANVVYVARSERDNWVLPLDTLRAAVTPRTRLIFLTNPNN PTGQVLDVGALRDIVDIADRVGAWLLVDEVYAGLEWEGPRAPSIAGLYDRGITTGSVS KALGLQGLRTGWLICRDPTLVMDAIILRENTSEIMNIMGEVIAEIALRPDRLAPRLQD ARSAGAANLARLTSWLETEPQLSWVAPKAGLIGLGRLPEGCDSDAFAKLLLADPYRTF VLPGSAYGQPQHIRLGVGGGAGVNLEQGLARLSQALRDWSA" gene 83827..84579 /locus_tag="RD1_0080" /db_xref="GeneID:4198326" CDS 83827..84579 /locus_tag="RD1_0080" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680502.1" /db_xref="GI:110677495" /db_xref="GeneID:4198326" /translation="MQPLLHGRPARLAILDYGLFQVHEDGRIIGICGYLIQTTAGENV LIDTGFPAKYGVDHAAATEEDALGDFGQVLSLTETNLAPAQLALLGLARSDIDLMIQS HTHIDHVGFIGGFPGVPILIAATERALPRPLYWSGKQALEWPDADYIELQSDTRLGPG FDVLLVPGHAPGQLAFVLELPHTGAVVLTSDAISRPSELDTDFAGAWDAPLARQHANR LMRRAQDDKAMVIYGHCPAQWSELRKAPNWYD" gene complement(84576..84767) /locus_tag="RD1_0081" /db_xref="GeneID:4198327" CDS complement(84576..84767) /locus_tag="RD1_0081" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680503.1" /db_xref="GI:110677496" /db_xref="GeneID:4198327" /translation="MEKFRHERGREVKKMAFFTSAAGGFGHVLHPAEIAAWPGFLVSP AGDVSSGKVIILNQRRHLR" gene complement(84780..84938) /locus_tag="RD1_0082" /db_xref="GeneID:4198328" CDS complement(84780..84938) /locus_tag="RD1_0082" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680504.1" /db_xref="GI:110677497" /db_xref="GeneID:4198328" /translation="MHLVSPFSGIVMWLRIVFFYLIVFYCAQRRKPSRDRMNARAFHK ASRFADPG" gene 84933..86558 /locus_tag="RD1_0083" /db_xref="GeneID:4198329" CDS 84933..86558 /locus_tag="RD1_0083" /codon_start=1 /transl_table=11 /product="glutamate synthase, putative" /protein_id="YP_680505.1" /db_xref="GI:110677498" /db_xref="GeneID:4198329" /translation="MHFLEPMLRFTTMAVVAALAVASALAAMIWSVWLIIPFVVFAAL TLLGIHDLRQPHHSILRNYPVLGHMRFLFEGIRPEIRQYLIESDQDEEPFSRDARSLV YQRAKGEEDKRPFGTRMRVYDAGYAWVTHSVNPIHITDTDFRVTIGGPKCAQPYCASI YNISAMSFGSLSGNAIEALNTGAKMGGFAHDTGEGSVSKYHKIGGGDLIFQVASGYFG CRHEDGTFNPDKFRETASLDQIKMIEVKLSQGAKPGHGGMLPASKITEEIAEARGIPM GVDCVSPAGHSSFSTPLEMMEFIGQLRSLSNGKPVGFKLCIGHRREFMCMVKAMLQTG IVPDFIVVDGTEGGTGAAPVEFSNHVGMPMVEGLAFVHNTLRGAGLRDQIKIGAAGKI VSAFDVARALALGADWCNSARGFMFAIGCIQAQACHTNHCPVGVATQDPLRARALDVV SKSERVARYHRNTLKALGEMTGAAGLEHPGCFMPQHMMLRLGDKKMAEASDIFAYLPE GFLINNQEGSPIMEDYRKRWNRADAASFAAPGF" gene complement(86744..88468) /locus_tag="RD1_0084" /db_xref="GeneID:4198099" CDS complement(86744..88468) /locus_tag="RD1_0084" /codon_start=1 /transl_table=11 /product="sensor histidine kinase, putative" /protein_id="YP_680506.1" /db_xref="GI:110677499" /db_xref="GeneID:4198099" /translation="MTGGFLDGDVFRGLAFRILVFLTLALLPFGLIAVFQTREIARQA NSNSELSLLALTDQAASAERSIFQEAFGAAEALSALAQLYASDARACSSFLSAYRRAV GLYSFISYLPPDGIVRCSSAGGSYDFSNAPDFIKELANPRRQITANPSGEISAEPVLV LSQPFFTRAGFAGFMTMSVPLGVISANMADPLDGMPAHLVTFNADGKIIRSDRADDMT KADMPADKSLRALVGQDSVVFQSTNTLGEARIYAVVPVVPDVAYAMSIWRPDEMEESL QQSIGLSLALPVIMWLASLVVAFWSLNRLAVRHIRKLGRQMRHFAFNRRVPRTTLGQG VPRELVEIQNAFVRMADSIVRDEAALEDTLRDKNILLKEVHHRVKNNLQLISSIMNMQ IRRAESDDARQVLKRLQERILSLATVHKNLYQTENLDRVDAGKLLEEIIGQLLTMGLS ASAGVQVSQHYASIQMDADDAAPLTLLVSEALTNALKYLGAPENGGSARLDITFEMAA EETACFRIANTTSGAQGSAGTGLGTQLISAFTRQLNGTVEVGYQQQEHWLEVTFPLRE RVKGTYDF" gene complement(88470..89027) /locus_tag="RD1_0085" /db_xref="GeneID:4198100" CDS complement(88470..89027) /locus_tag="RD1_0085" /note="Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate" /codon_start=1 /transl_table=11 /product="RNA polymerase sigma factor" /protein_id="YP_680507.1" /db_xref="GI:110677500" /db_xref="GeneID:4198100" /translation="MNDPDPRFALLDHLPAMRGFATSLTRDSVAADDVVQDAVIKAWT SFDQFQPGTNLRAWLFTILRNTFYSSTRKSGREVADVDGVHFGALAEKPAHDGRLQMT DFRSAFAQLPDEQREALLLVGASGFSYEEAAEMCGVAVGTIKSRTGRGRQRLAELMQL EDEEALEMTDDATLSVLTAAKATTF" gene complement(89024..89191) /locus_tag="RD1_0086" /db_xref="GeneID:4198101" CDS complement(89024..89191) /locus_tag="RD1_0086" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680508.1" /db_xref="GI:110677501" /db_xref="GeneID:4198101" /translation="MISMAQSGAQRKRDSIIDQSLKQAYDQVADEGVPDRFRLLLDAL KEQEQQQGRSK" gene 89289..90098 /gene="tcrX" /locus_tag="RD1_0087" /db_xref="GeneID:4198102" CDS 89289..90098 /gene="tcrX" /locus_tag="RD1_0087" /note="in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media" /codon_start=1 /transl_table=11 /product="two-component response regulator" /protein_id="YP_680509.1" /db_xref="GI:110677502" /db_xref="GeneID:4198102" /translation="MSNPSDTTDISSQLANYLPYLRRFARAMTGSQSSGDRFAAAALE TILTDRSVLDGSDVKTGLFRVLYRIWSSAGAPVDDAESGLKARAQKHMAKLTDNSREA LLLHTLEGFSFDKIANIIGIEQTEAESLVSIARREIADAASGSVMIIEDEAIIAMDLE SIVSEMGHRVTGIATTRAEAVALGKADAPDLILADIQLADNSSGIDAVNDLIEALGER PVIFITAFPERLLTGEKHEPAFLISKPYAEDQVISSVSQAMFFSSTETLTT" gene complement(90109..91029) /locus_tag="RD1_0088" /db_xref="GeneID:4198103" CDS complement(90109..91029) /locus_tag="RD1_0088" /EC_number="3.1.-.-" /codon_start=1 /transl_table=11 /product="ribonuclease BN, putative" /protein_id="YP_680510.1" /db_xref="GI:110677503" /db_xref="GeneID:4198103" /translation="MTSRISIGLLGKALFAAFGLVGRSNLALIAAGVAFYSMLSIFPA LAALIAVLSLIADPEVVVVQLAELQELMPEDVYDILNAQIVGLVSTSSDTLGWTGLVS VIVALWSARAGVGAMMHGLNVVYATDSRGTWRHYLRAVLLTVSLVAIGIIALLALVVA PVILAFLALGGFTSVIIDLLRWGVGIAVIFAGIGLLYRFGPNRRPAITRFVTPGSVFA AVSWAALSIAFSYYVAHFGNYNEVYGSIGAVIAMLVWLWISSFLVLFGAALNAEIEAR TEPSDAKPVADDPREDQEVPTDDAELAPTS" gene 91266..92525 /locus_tag="RD1_0089" /db_xref="GeneID:4198104" CDS 91266..92525 /locus_tag="RD1_0089" /codon_start=1 /transl_table=11 /product="aminotransferase, putative" /protein_id="YP_680511.1" /db_xref="GI:110677504" /db_xref="GeneID:4198104" /translation="MPEFAPDLMQDIRSRFAHVDACPFQGPRVFFENAGGALTLNSAV ETSAKFAAIPDNQGRDNPAAQALVKIIDRAKSDMALFFSAHGGQFFVGESGTELTFRL IRTAAMGSGAGSIIGSTVEHPASRSAARHWAEQAGKPYISVPHDDATGAVTPAAYAAL MTPDVRVATILHTSPVTGIANDVAGISAAIRAVAPDAFIIVDGIQHASHGRIDIAGYD IDGYVISPYKVFSRHGYGVAWVSDRMTALPLEQLIDGPRASWEMGTRDTGAYATFSDV VQYFEWLGTQHTDSDDREQRIRAAGGAIHAHEQVLTHAMLRGTGNLPGLAELPGVTIL GGADNPRREGLVCFALDHVPAVEIVEKLNAQGIRTHIRKADHYSGNILSPLGLTSAVR VSLCHYNTLTEVSAFLAAMKDIAARAK" gene 92563..93852 /gene="dapE" /locus_tag="RD1_0090" /db_xref="GeneID:4198105" CDS 92563..93852 /gene="dapE" /locus_tag="RD1_0090" /EC_number="3.5.1.18" /note="dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simil" /codon_start=1 /transl_table=11 /product="succinyl-diaminopimelate desuccinylase" /protein_id="YP_680512.1" /db_xref="GI:110677505" /db_xref="GeneID:4198105" /translation="MQPDLAAAIENRRDDLIALTQALIRIPTLNPPGCEYHTICQLIA SRLEARGFAIEMIRARGTPGDSDTYPRWNVVARHDGATQGECVHFNSHIDVVEVGQGW THDPFAGTLQDGRIYGRGACDMKGGLAASIIAVEAFIDTYPDYAGAIEISGTADEESG GYGGVAYLAERGYFDPQRVQHAIIPEPLNKDRICLGHRGGWWAEIETHGEIAHGSMPF LGDCAVRHMGAVLSEFEDKLFPAMALRRTDMPVVPDGARQSTMNINSIHGGQAEQDAD FDGLPAHCVPDSCRIVIDRRFLLEEPLDQVRAEVTGLLETLKQTRPDFEYTLTEINSV LPSMTDRDAPIVRVVAQAIEEVIGNPPDYVASPGTYDQKHIDRIGKLKNCIAYGPGIL ELAHKPDEYVGVDDMIDSAQVMAQSLVTLLTGKAQSV" gene complement(93937..94791) /gene="panC" /locus_tag="RD1_0091" /db_xref="GeneID:4198106" CDS complement(93937..94791) /gene="panC" /locus_tag="RD1_0091" /EC_number="6.3.2.1" /codon_start=1 /transl_table=11 /product="pantoate--beta-alanine ligase" /protein_id="YP_680513.1" /db_xref="GI:110677506" /db_xref="GeneID:4198106" /translation="MTVPVLRTLSALRSATREWHLAGETIGVVPTMGALHDGHLSLVA AAKSACDRVIVTIFVNPKQFNKASDLASYPRTEEDDARKLARFDVDAVYAPDVSQIYP EGFCTNVSVAGMTDVLCGAHRPGHFDGVATVVTKLFTQTSADKAFFGEKDFQQLMVVQ RMARDLDIPIEVVGCPTIREEDGLAMSSRNLLLSDRARTMAPRMHEIMQEAATALGQG APFDALQATALRQLTAAGFTDVDYFELRSCASLSLLDHASVPARLFAAAWLAGVRLID NIDVPVAR" gene complement(94788..95627) /gene="panB" /locus_tag="RD1_0093" /db_xref="GeneID:4198107" CDS complement(94788..95627) /gene="panB" /locus_tag="RD1_0093" /EC_number="2.1.2.11" /note="catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate" /codon_start=1 /transl_table=11 /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /protein_id="YP_680514.1" /db_xref="GI:110677507" /db_xref="GeneID:4198107" /translation="MSATARQTAPMPVDIKSRKGGEPIVSLTAYTTPMAQMMDAHCDI VLVGDSLGMVLHGLPSTLEVTMEMMILHGRAVSRGLSRAMMVIDMPFGSYEQSPEQAF ESAARLMRETGAGAVKLEGGQHMAQTIEFLVQRGIPVMAHIGLTPQSINTLGGYKVQG RGPQAEVLMQDAKAVAAAGAFSVVLEKTPQGLSDEITASIDIPTIGIGASAGCDGQIL VVDDMLGLFTAFKAKFVKRYAELGDLGAAAIAAYAADVRARRFPAPEHVFADAEPKAN TKR" gene 95873..96634 /locus_tag="RD1_0094" /db_xref="GeneID:4198108" CDS 95873..96634 /locus_tag="RD1_0094" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680515.1" /db_xref="GI:110677508" /db_xref="GeneID:4198108" /translation="MAGWPKSFTEKKRRARGICRAMLLGMSASMALSTPGLADDWDYT ITPYIWAPALDLNLDVGPNPPIRGDVSMLGILDGALLLQGQARRGRWSFLGEFNYLNL SDNFGVSSTDPRAEWRLKGTMVSLAAGYAVYDNADTRIEAIGGIRAWDLETSTEVSNL TASRTSTFVDPMIGMRVETPLGQGFNFHGLANIGGSNFGSDRQVEAIAQVNWPWTQRT SLSAGYRYLSLDFDEDQVLIDATMEGPFIAVSFDF" gene 96769..97056 /locus_tag="RD1_0095" /db_xref="GeneID:4198109" CDS 96769..97056 /locus_tag="RD1_0095" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680516.1" /db_xref="GI:110677509" /db_xref="GeneID:4198109" /translation="MSESVNRDANDSDARKGGDSAQWERAMTDLEIQASKLADRAEKA THAERMMLQPQIDRVLTTLAMRGAPVSGRLRRINNTLKDEALDDMFDNMPV" gene complement(97134..98264) /locus_tag="RD1_0096" /db_xref="GeneID:4198110" CDS complement(97134..98264) /locus_tag="RD1_0096" /codon_start=1 /transl_table=11 /product="acetoin utilization protein, putative" /protein_id="YP_680517.1" /db_xref="GI:110677510" /db_xref="GeneID:4198110" /translation="MKAPRLIGAEIFRHSSYGRWHPLRVPRVSTVMDLSRAMGWLPPA QFITAPRAKPKALLAWHTADYIAALQRVEATQEATPHDTQRHDIGTVTNPVYPEIFRR PATAAGGSLLAGELLREGGIIYNPPGGTHHGMPDRANGFCYLNDPVLAMLSLRRNGVQ RIAYVDIDAHHCDGVAAGFHGDPQCLMISVHEEGLWPRTGLLEDTAGGAGLNLPVPRG LNDTEMAYIRDRLILPQVEAFRPDAVVLLCGADGVEEDPLAHLCLSNNAHWAVTKALM GIAPRMLVLGGGGYNPWSVGRLWTGVWATLNGHDIPDRLPPEAQAVLRALRFEGNRRG KNPPEHWFTTLRDAPRPGPVRSDITDRVAELSRKAARLRLDH" gene 98445..98945 /locus_tag="RD1_0097" /db_xref="GeneID:4198111" CDS 98445..98945 /locus_tag="RD1_0097" /codon_start=1 /transl_table=11 /product="acetyltransferase, GNAT family protein, putative" /protein_id="YP_680518.1" /db_xref="GI:110677511" /db_xref="GeneID:4198111" /translation="MRDDIILSPITQTQHREDALDLAMRATDYATLEVGHAPDGAYIR DFFTAVPPGLGPDCLMHFGVMEGPAMVGMICIAEGYEFPDDWWIGLVLLDPAFRGQGV GHKVVSDIKTRARNRRINLLKLAVLAANPRALKFWHREGFTHHRDAPATPQSDGHDRI VLKYQL" gene 98961..99707 /gene="linX" /locus_tag="RD1_0098" /db_xref="GeneID:4198112" CDS 98961..99707 /gene="linX" /locus_tag="RD1_0098" /EC_number="1.1.1.100" /note="Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis" /codon_start=1 /transl_table=11 /product="3-ketoacyl-(acyl-carrier-protein) reductase" /protein_id="YP_680519.1" /db_xref="GI:110677512" /db_xref="GeneID:4198112" /translation="MRLSGKTAIITGGASGFGAGIARRFIAEGCRVMVADINGDAAAQ MAIELGENAVAQKVDVSDGASVDAMAEAAQEVWGDVDILINNAGVTHLPAPMEDVSES DFDRVLAVNVKAVYLTARAFVPRMKARGQGVILNVASTAGVSPRPNLNWYNASKGWMI TATKTMAVELAPNGIRVNALNPVAGETPLLKTFLGEDTPEMREKFLSTIPLGRFSSPE DLGNAACYLCSDEATMITGVALEVDGGRCI" gene 99704..100054 /locus_tag="RD1_0099" /db_xref="GeneID:4198113" CDS 99704..100054 /locus_tag="RD1_0099" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680520.1" /db_xref="GI:110677513" /db_xref="GeneID:4198113" /translation="MKPINLAEKLGQFTSHWDPHVVAQYNDNDVMVVRFQGEFPFHMH ADTDDFFLVLQGEMTMDLEDASHVVKAGELFVVPRGVTHRPRAEAECHVLLIEPKGEP NTGDPATAAAKPHI" gene 100056..101048 /locus_tag="RD1_0100" /db_xref="GeneID:4198114" CDS 100056..101048 /locus_tag="RD1_0100" /codon_start=1 /transl_table=11 /product="peptidase, T4 family, putative" /protein_id="YP_680521.1" /db_xref="GI:110677514" /db_xref="GeneID:4198114" /translation="MRPGPRNLITDVAGLRVGNAQDHKLKSGATVLTADAPFTASVHV MGGAPGTRETDLLAPDKSVASVDALVLSGGSAFGLEACTGVVDGLRAMGRGFAVGSAI VPIVPGAILFDLINGGVKDWSTNPYPALGRRALDTASDTFEIGTAGAGTGATTATLKG GLGSSSLVLDNGITVGALVAANPFGAVTTPGSRHFFAAPYEMGNEFAGLGPDPTKGHG LPVRTKVLHGTGAGANTTIAIVATDAALDKAQCQRMAIAAHDGMARAIVPSHTPMDGD LVFALSTGGKALADLDMIGHGAALCLTRAIARAVYAATPQPGDLLPSWHDLPIS" gene complement(101045..102982) /gene="dxs" /locus_tag="RD1_0101" /db_xref="GeneID:4198115" CDS complement(101045..102982) /gene="dxs" /locus_tag="RD1_0101" /EC_number="2.2.1.7" /note="catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate" /codon_start=1 /transl_table=11 /product="1-deoxy-D-xylulose-5-phosphate synthase" /protein_id="YP_680522.1" /db_xref="GI:110677515" /db_xref="GeneID:4198115" /translation="MTDTKTPTLDRVAGPADLRSMSDTELRNVADELRAEVVEAVSQT GGHLGSSLGVVELSVAIHAVFDTPRDKLVWDVGHQCYPHKILTGRRKQMPTLRQGGGI SGFTKRSESEYDPFGAAHSSTSISAALGFTISRDMGQPTGDAVAVIGDGSISAGMAYE AMNNAGHEGRRMFVILNDNEMSIAPPVGAMSSYLSSLSELSRAGPFGGLVAIAEGMEQ LAPKPVRDGARRARELVTGLENRGTFFEELGFDYIGPIDGHDMAQLLSVLRGAKARAT GPVLIHCCTVKGKGYAPAEGSADKYHGVSKFDVGTGVQAKAKANAPSYTAVFGDALTT LAEEDPSVVAVTAAMPSGTGVDRMAKRFPNRVFDVGIAEQHGVTFAAAMAATGLKPFC AIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMV VMAAADEAELVHMVATAGAHNDGPIAFRYPRGNGTGVPLPETGRVLEIGKGRMIREGD GEVAILSLGTLLSDCEAAARILEAEGINATIADARFAKPLDMALIANLVQTHKALITV EQGAMAGFGAMVLQSMAAEGLLDLGCKVRTMCLPDRFIDQAAPAEMYRDAGLDTMGIV EQVTRVLGRDLKVVTLNAKRR" gene complement(103204..104319) /gene="pufC" /locus_tag="RD1_0102" /db_xref="GeneID:4198116" CDS complement(103204..104319) /gene="pufC" /locus_tag="RD1_0102" /codon_start=1 /transl_table=11 /product="photosynthetic reaction center cytochrome c subunit" /protein_id="YP_680523.1" /db_xref="GI:110677516" /db_xref="GeneID:4198116" /translation="MFPKWFDKWNADNPTNIFGPAILIGVLGVAVFGAAAIVSIGNPA QTASMQTGPRGTGMHVAEFNVTRFAPDPTIEEYYTEAPYIPEGGEELAKDIYENVQVL GDLTDDNFNRVMTAMTQWIAPEEGCVYCHGEGDLETYGEDNLYTKVVARRMIQMTQNI NENWDGHVNANAEVGVNCYTCHRGEHVPSEIWFNITPVTEATAGWASVQNRATPLSQS TSLPSNALEIYLTEYEAVNVHDLESRVAGVPNDVEVASIQKTEMTFSLMNYFSNSLGV NCVFCHNSRAFYDPGQHTPQWATALLGRQMVIEMNQEYLIPLEDEYPEDRLGPVYADA PKAACKTCHKGYQKPMQGLNVIADWPELATTEAPVYE" gene complement(104322..105317) /gene="pufM" /locus_tag="RD1_0103" /db_xref="GeneID:4198117" CDS complement(104322..105317) /gene="pufM" /locus_tag="RD1_0103" /codon_start=1 /transl_table=11 /product="photosynthetic reaction center M subunit" /protein_id="YP_680524.1" /db_xref="GI:110677517" /db_xref="GeneID:4198117" /translation="MMYPEYQNIFTQVQVRGTPEMGMDDAGNNMMEERVGKPFFSTLA GLFGNGQIGPYYFGWTSIVAFGTGIAWFVIVGFNMLAQVGWSIPQFIRQLFWLALEPP SPEYGLSMPPLNDGGWYIIASFFLLVSVMTWLLRAYLLAEQHKMGKHIFWGFAAAVWL FLVLGLFRPILMGSWSEAVPYGIFPHLDWTTAFSIRYGNLYYNPFHCLSIVFLYGSVL LFCMHGGTILAVTRYGGDRELEQIYDRGTATERAALFWRWTMGFNATMEGIHRWAWWF AVLTPITGGIGILLTGTVVDNWFIWAQEHHFAPMYDGSYGYEDYGSYEAFIGKEN" gene complement(105319..106170) /gene="pufL" /locus_tag="RD1_0104" /db_xref="GeneID:4198118" CDS complement(105319..106170) /gene="pufL" /locus_tag="RD1_0104" /codon_start=1 /transl_table=11 /product="photosynthetic reaction center L subunit" /protein_id="YP_680525.1" /db_xref="GI:110677518" /db_xref="GeneID:4198118" /translation="MALLSFERKYRVRGGTLVGGDLFDFWVGPFYVGFFGVTTAFFAL LGTILIFWGASQQGTFNPWLINIAPPDLSYGLGLAPLLEGGLWQIITICATGAFISWA LREVEICRKLGMGYHVPFGFAAAIIAYMTLVIFRPLLMGAWGHGFPYGIFSHLDWVSN VGYAYLHFHYNPAHMLAVTLFFTTTLALALHGGLILSACNPEKGEEAKTPDHEDTFFR DFIGYSVGTLGIHRLGYLLAINAGLWSAICIIISGPVWTAGWPEWWNWWLDMPIWGEP IAVIGGM" gene 106185..106316 /locus_tag="RD1_0105" /db_xref="GeneID:4198507" CDS 106185..106316 /locus_tag="RD1_0105" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680526.1" /db_xref="GI:110677519" /db_xref="GeneID:4198507" /translation="MCGTPVSNRSDKGLREMRNWPLCRHASKAEAVDKLSYEFAAGV" gene complement(106396..106554) /gene="pufA" /locus_tag="RD1_0106" /db_xref="GeneID:4198508" CDS complement(106396..106554) /gene="pufA" /locus_tag="RD1_0106" /codon_start=1 /transl_table=11 /product="light-harvesting protein B-875, alpha chain" /protein_id="YP_680527.1" /db_xref="GI:110677520" /db_xref="GeneID:4198508" /translation="MAKFYKIWLIFDPRRVFVAQGVFLFLLAAMIHLVVLSSGLNWFE AAAAVGGQ" gene complement(106567..106719) /gene="pufB" /locus_tag="RD1_0107" /db_xref="GeneID:4198509" CDS complement(106567..106719) /gene="pufB" /locus_tag="RD1_0107" /codon_start=1 /transl_table=11 /product="light-harvesting protein B-875, beta chain" /protein_id="YP_680528.1" /db_xref="GI:110677521" /db_xref="GeneID:4198509" /translation="MADNTDLSFTGLTDEQAQELHSVYMSGLFLFAAVAVVAHLATYI WRPWFG" gene complement(106901..107134) /gene="pufQ" /locus_tag="RD1_0108" /db_xref="GeneID:4198510" CDS complement(106901..107134) /gene="pufQ" /locus_tag="RD1_0108" /codon_start=1 /transl_table=11 /product="protein pufQ" /protein_id="YP_680529.1" /db_xref="GI:110677522" /db_xref="GeneID:4198510" /translation="MMDTTVQAPAHSREHVKRKNGVEFSVYFAIIFVATLPLATLTWA MHAIKSRSFTDKGPMARAWSQARIITPMIFSAY" gene complement(107152..108627) /gene="bchZ" /locus_tag="RD1_0109" /db_xref="GeneID:4198511" CDS complement(107152..108627) /gene="bchZ" /locus_tag="RD1_0109" /EC_number="1.18.1.-" /codon_start=1 /transl_table=11 /product="chlorophyllide reductase subunit Z" /protein_id="YP_680530.1" /db_xref="GI:110677523" /db_xref="GeneID:4198511" /translation="MLVTDHDRAGGYWGAVYAFCAVKGLQVVIDGPVGCENLPVTSVL HYTDALPPHELPIVVTGLGEGEMGSGTEESMKRAWDTLDPALPAVVVTGSIAEMIGGG VTPQGTNIQRFLPRTIDEDQWEAADRAMTWIFTEFGMTKGRMPPEKKRGEGARPRVNI LGPMYGTFNMPSDLAEIRRLVEGIGCEVNMVLPLGAHVAEMRNLVNADVNICMYREFG RGLSELLAKPYLQAPIGVESTTKFLRALGNLVGLDPEPFITQEKHSTIKPVWDLWRSV TQDFFATASFGIVANETYARGIRQFLENDLGFPCAFAVARIAGKKTNNEEVRAMIGQK KPLIVLGSINEKMYLAEQKAGFGPAPAFIPASFPGAAIRRHTGTPFMGYAGATYLLQE ICNGLFDALFHILPLGTDMDATDATLTPLRRDFPWDEDAQAMLDRIVETHPILTRISA AKSLRDAAEKAALAAGDERVVLSTVRALDPASAGPDLEDQT" gene complement(108716..110245) /gene="bchY" /locus_tag="RD1_0110" /db_xref="GeneID:4198512" CDS complement(108716..110245) /gene="bchY" /locus_tag="RD1_0110" /EC_number="1.18.1.-" /codon_start=1 /transl_table=11 /product="chlorophyllide reductase subunit Y" /protein_id="YP_680531.1" /db_xref="GI:110677524" /db_xref="GeneID:4198512" /translation="MIKGHPHGDVSRVASDAPADAMGCHSGADMAEAARNAGQSELLD KFKADYPVGPHDKPQSMCPAFGSLRVGLRMKRVATVLSGSACCVYGLTFVSHFYGARR SVGYVPFNSESLVTGKLYEDIRDSVHELADPDRYDAIVVTNLCVPTASGVPLRLLPKE INGVRIVGIDVPGFGVPTHAEAKDVLAGAMLNYARAEAMAGPVAAPVGGKSARPTVAM LGEMFPADPMMIGQMLAPMGLAAGPVLPCREWRELYAALDCAVVAAIHPFYVDTVREF KAAGRPVVGSAPVGYDGTAAWLKAIGETHGVSAEDIAAAQNAVLPAIRGALGATPING TITLSGYEGSELLVARLLIESGANVPYVGTACANSPWSADDAAWLEAKGVKVKYRASL EDDCAAMEAIQPDLAIGTTPVVQKAKQLGIPGLYFTNLISARPLMGVAGAGSLATVIN AAIGNKERMAHMQEFFEGVGAGDTAGVWEGAPNLRPDFRAQHQKKLDKLARAAKAQEM I" gene complement(110444..111448) /gene="bchX" /locus_tag="RD1_0111" /db_xref="GeneID:4198513" CDS complement(110444..111448) /gene="bchX" /locus_tag="RD1_0111" /EC_number="1.18.1.-" /codon_start=1 /transl_table=11 /product="chlorophyllide reductase subunit X" /protein_id="YP_680532.1" /db_xref="GI:110677525" /db_xref="GeneID:4198513" /translation="MKDEVPNLKDFDKRLRDEAQAEPTLEVPQGEPASKTQIIAIYGK GGIGKSFTLANLSHMMAEQGKRVLLIGCDPKSDTTSLLFGGKACPTIIETSTRKKLAG EEVKIGDVCFKRGGVFAMELGGPEVGRGCGGRGIIHGFELLEKLGFHDWDFDYVLLDF LGDVVCGGFGLPIARDMAQKVILVASNDLQSLYVANNVCSAVEYFRKLGGNVGVAGLV INKDDGTGEAAAFAEAVDIPVLASIPQDDDLRKKSANYQIVGTQESQWGDLFAMLGDN VAVAPPQRPTPLDQDGLLGLFDASETGGDYVLVPATDVDMRGKNAEPKPSLEVVYDDA " gene complement(111445..112386) /gene="bchC" /locus_tag="RD1_0112" /db_xref="GeneID:4198514" CDS complement(111445..112386) /gene="bchC" /locus_tag="RD1_0112" /EC_number="1.-.-.-" /codon_start=1 /transl_table=11 /product="2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase" /protein_id="YP_680533.1" /db_xref="GI:110677526" /db_xref="GeneID:4198514" /translation="MDTTAVLLKGPKDLDVDTLQLHVPGDGDLVVEIEHSGISTGTEK LFWSGEMPPFPGMGYPLVPGYEAVGEVVEADRATGFKVGERVFVPGANCYDGAFGLFG GAASRVVTASDRVTRIDAGHGASGALLALAATARHSMAGLNKSVPDLIVGHGVLGRLL ARLTIAAGAPAPMVWEIDESRRKGAQGYEVIAPEDDPRRDYTSVYDASGSVEVLNDLV GRLAKGGEIVLAGFYTTAISFAFPPAFMKEARFRVAAEWTHDDLAATRALVEGGSLSL ENLITHQASHLNARAAYAQAFTDPDCLKMILNWKDVA" gene complement(112514..113620) /gene="crtF" /locus_tag="RD1_0113" /db_xref="GeneID:4198515" CDS complement(112514..113620) /gene="crtF" /locus_tag="RD1_0113" /EC_number="2.1.1.-" /codon_start=1 /transl_table=11 /product="hydroxyneurosporene methyltransferase" /protein_id="YP_680534.1" /db_xref="GI:110677527" /db_xref="GeneID:4198515" /translation="MPEWRGGWLNRLVARPGFQSWASRFLLTRGQARRDGAILFDVVQ GFVQSQVLMAVVELDLLRRLRGGPQSAEMLGRATAIPPERMQVLLQAAAALKLLKRTR SGQYGLARKGAALMGVPGLEAMIRHHRAFYTDLKDPVDLLRGPERTELSEFWPYVFGA RGEIDPQVAEAYSDLMAQSQLLVAQDTLRTVSLKGVQHLLDIGGGTGAFLKAVGDAYP NLKMTLFDLPQVTPGATARFEQAGMMDRVTLHPGSFRDDLLPDGADAISLIRVLYDHA DDTVATLLEDVFDALPDGGRLIISEPMGGGAQPDRAGDVYFAFYTMAMQTGRTRSAEE ITALCQAAGFTDIRCPRPARNYVTRVISARKPNQ" gene complement(113634..114518) /gene="crtE" /locus_tag="RD1_0114" /db_xref="GeneID:4198516" CDS complement(113634..114518) /gene="crtE" /locus_tag="RD1_0114" /EC_number="2.5.1.29" /codon_start=1 /transl_table=11 /product="geranylgeranyl pyrophosphate synthetase" /protein_id="YP_680535.1" /db_xref="GI:110677528" /db_xref="GeneID:4198516" /translation="MGMNSRIEAAIAQAVAVGQGRGAVPQRLSSALGYATAPGGARIR PTILTSVALACGDDQPKLTDAAASALELIHCASLVHDDLPCFDDADTRRGKPSVHKAY SEPLAVLTGDSLIVLAFEILARQSGLAPDRVAQMILILSQRTGMPGGICAGQGWESEA EIDLSAYHQAKTGALFIAATQMGAVAAGQEAEPWFELGARIGEAFQVADDLRDALYDA DTLGKPVGQDDLHGRPNAVTLLGVQGAISRLKDILGGAIASIPSCRGEAQLADMVRRY AERLTPVAPNVAASRSNV" gene 114612..116162 /gene="crtD" /locus_tag="RD1_0115" /db_xref="GeneID:4198517" CDS 114612..116162 /gene="crtD" /locus_tag="RD1_0115" /EC_number="1.14.99.-" /codon_start=1 /transl_table=11 /product="methoxyneurosporene dehydrogenase" /protein_id="YP_680536.1" /db_xref="GI:110677529" /db_xref="GeneID:4198517" /translation="MHVSTAPLIPDRPRAIVIGAGIAGLAAALRLATSGMQVTLLERH NHPGGKIRTLSSAAGPVDAGPTVLTMRHVFDDLFACAGTRLKDHVTLVPQSILARHFW PDGSKLDLHADPLLSRDAIAAFAGNTSADEFMQFNRRTQQLFDAFDAPMMQAPNPRMR DLVPHVLKQPQLIAAMAPLSTLKTSLGRAFSDPRLAQLFGRYATYVGGAPHLSPAILS LIWQAEAAGVWVVEGGMHKLAHAIAKLARHAGVDIRYNTHVDRIKTVGGRAVGVEIDG TYLLEAEAILYAGDPRALATGSMGADLRVVAPQTVKLPRSFSARVHSFAATPQGRDLT HHNVFFAADPDCEFKELMAGRMPADPTLYLCAEDRGHGADIPTLERFEMISNAPATET HTPPQEIEKWHQQIMQRMADMGVTFTPMPTTETLTTPQDFAMLFPETLGALYGQTPHG LTAALQRPTAQTPIAGLWLAGGGTHPGAGVPMATLSARHAAEAILRAQTSTSLSAPTA TPGGMSTG" gene 116012..117031 /gene="crtC" /locus_tag="RD1_0116" /db_xref="GeneID:4198518" CDS 116012..117031 /gene="crtC" /locus_tag="RD1_0116" /EC_number="1.-.-.-" /codon_start=1 /transl_table=11 /product="hydroxyneurosporene dehydrogenase" /protein_id="YP_680537.1" /db_xref="GI:110677530" /db_xref="GeneID:4198518" /translation="MARGGRHPSGGGGPDGDTLRPARGRGDLARPNFNVAVGPNGYAW WYVDGLSDCGSRAVSVIGFIGSVFSPWYRWSGRKCPQDHVCINVATYGPGGRFTMTDR GQSALRQTASRLQVGPSMMRWDGNDLVIEINEVSSPPLINRIRGEIRVTPSAITNVEL PLTPDGAHVWRPFAPRARISVNIDRPGWQWQGEGYFDANFGSRALEEDFSYWTWGRFP TSGGATCFYDATRLDGTELSAGFAFDHDGTARKIEMPPKTGFRRTLWAVKRETRSDAG YKPHQVMSMLDAPFYSRSAVRTRIDGEETTGVHEALDLTRFRSPLLKPMLAVRVPRRK NWSWD" gene 117165..117887 /locus_tag="RD1_0117" /db_xref="GeneID:4198519" CDS 117165..117887 /locus_tag="RD1_0117" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680538.1" /db_xref="GI:110677531" /db_xref="GeneID:4198519" /translation="MYHIKTGTLAGLLALSAGPVVAQGGAWTYEGSFYLFAAETTLNV GGIEGELSFSDALDNLEFAGMGAFTASNGQWTFIADLMYFNLGFENSTPGDAFSRLDT SSKTTVFNALALYKMRDASSYSFHLGGGFRYFNTDTTLRLRPGTQPGTTVGDDNSWTD PIVAAMGRFELSDTWSTTISADYGNFVNDRETYQFTVTFDYEFAENWTARAGYRYLNV DNDDDDFRLEQSGPVLGVSYRF" gene complement(117907..118389) /gene="crtK" /locus_tag="RD1_0118" /db_xref="GeneID:4198520" CDS complement(117907..118389) /gene="crtK" /locus_tag="RD1_0118" /codon_start=1 /transl_table=11 /product="CrtK protein" /protein_id="YP_680539.1" /db_xref="GI:110677532" /db_xref="GeneID:4198520" /translation="MFWLLFSLFLVACVGAGLTGGLFPPGPWYRKLQKPWFTPPDWVF PVTWSVLYVCIAVAGARIAMAENNAVAMAFWTLQIAFNGLWTPVFFGIRNIRLGMAVV CMLWVIVLGGIIVMWPVDQIAALLFVPYLIWVTIAASLNAGVWWLNPEVARNPPHVAT " gene complement(118413..119432) /gene="crtB" /locus_tag="RD1_0119" /db_xref="GeneID:4198521" CDS complement(118413..119432) /gene="crtB" /locus_tag="RD1_0119" /EC_number="2.5.1.-" /codon_start=1 /transl_table=11 /product="phytoene synthase" /protein_id="YP_680540.1" /db_xref="GI:110677533" /db_xref="GeneID:4198521" /translation="MIAPADMEHCREAIRHGSLSFHAASKLLPAHVRDPALALYAFCR LADDEVDLKQDKVASVLRLRDRLDQVYAGRPKDAPTDRAFAAIVEEFEMPRALPDALL EGLAWDAAERRYDTLSGVKDYSARVASAVGAMMCVLMRVRDADALARACDLGVAMQLT NIARDVGEDALERRIYLPLEWLEDAGIEVEVFFADPRATKAVRGMVKRLVMEANRLYM RSEAGVGALPRGCRPGIYGARFIYAGIGGQLTRMGYDSISARARTNKWQKIGWLGQSM LLSGASMIMPKSSVLYARPLPEVQFLVDATAIGAPQRSRSDALMSVLSTLEARRQAQR AELTG" gene complement(119429..120976) /gene="ctrI" /locus_tag="RD1_0120" /db_xref="GeneID:4198522" CDS complement(119429..120976) /gene="ctrI" /locus_tag="RD1_0120" /EC_number="1.14.99.-" /codon_start=1 /transl_table=11 /product="phytoene dehydrogenase" /protein_id="YP_680541.1" /db_xref="GI:110677534" /db_xref="GeneID:4198522" /translation="MMTRIETIESVETGDRAGARAIVIGAGLGGLAAAMRLGAKGYRV TVIDKLDVPGGRGSAIWQDGHRFDLGPTIVTVPQLYRELWQACGRDFDADVTLKPLDP FYEIRWPDGTKFVAQQDTEKLRAEVAKLAPGDLAGFDKFLVDSSKRYWFGFEDLGRRS MHKLWDLVKVLPTFALLRADKSVYAHAASRVKDEKLRMALSFHPLFIGGDPLHVTSMY ILVAYLEKEFGVHYAMGGLAGMAQAMGRVIEDQGGTLLMNTQADEIVVRDGTVTGVRL ESGLEMGADVVVSNADAGHTYTRLMRNHKKKRWTPAKLKKTRYSMSLFVWYFGTKGTR GDWKDVGHHTILNGPRYAGLLKDIFIKGKLCDDMSLYVHRPSVTDPSVAPEGDDTFYV LSPVPHLGHDNGVDWAVEEPKYKAKMLKVLEDQLLPGLTAKISTEVVFTPETFRDRYL SPLGAGFSIEPRILQSAWFRPHNVSEEAKGLYLVGAGTHPGAGVPGVISTAEVLGKLV PDAETVK" gene 121082..121798 /gene="crtA" /locus_tag="RD1_0121" /db_xref="GeneID:4198523" CDS 121082..121798 /gene="crtA" /locus_tag="RD1_0121" /codon_start=1 /transl_table=11 /product="spheroidene monooxygenase" /protein_id="YP_680542.1" /db_xref="GI:110677535" /db_xref="GeneID:4198523" /translation="MTERPVVSISFFRFSRIPARIWALYMMGRARLSLPSVPGIGFWK LCGSGSGEGFTPLPNTAVFAILATWPDEQTARQQIDTAPIFAKYHRKASESWTIFLET ASVRGVWSGDTPFHPTGQKITGPLAALTRATVKPSLALKFWRRVPDISQMIGSDENVA FKIGIGEVPLLHQVTFSLWPDANAMAAFARMNGPHAAAIRAVRDEDWFAEELYARFAI LGDTGSWEGASPLEKLELHA" gene 121795..122799 /gene="bchI" /locus_tag="RD1_0122" /db_xref="GeneID:4198524" CDS 121795..122799 /gene="bchI" /locus_tag="RD1_0122" /EC_number="6.6.1.1" /note="involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH" /codon_start=1 /transl_table=11 /product="magnesium chelatase subunit I" /protein_id="YP_680543.1" /db_xref="GI:110677536" /db_xref="GeneID:4198524" /translation="MKTPFPFSAIVGQREMKQAMVLTAVDPGIGGVLVFGDRGTGKST AVRALAALLPPIRAVESCPVNSSRAADCPEWAELGSKKLVSRPTPVIDLPLGATEDRV VGALDIERALTRGEKAFEPGLLARANRGYLYIDEVNLLEDHIVDLLLDVAQSGENVVE REGLSIRHPARFVLVGSGNPEEGELRPQLLDRFGLSVEVRSPNDVAERVEVIKRRDAF ESDFDAFMAHYSAEDTKVRDTILKARKRLAKIKTPDDILHDCAALCIALGSDGLRGEL TLLRTARALAAYQGDKVLSRAHLRDIAPSALSHRLRRDPLDEAGSGARVARIVAEVLG " gene 122796..124454 /gene="bchD" /locus_tag="RD1_0123" /db_xref="GeneID:4198525" CDS 122796..124454 /gene="bchD" /locus_tag="RD1_0123" /EC_number="6.6.1.1" /note="involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH" /codon_start=1 /transl_table=11 /product="magnesium chelatase subunit D" /protein_id="YP_680544.1" /db_xref="GI:110677537" /db_xref="GeneID:4198525" /translation="MSHESDSWDRAALALRLLTVENADLGGAVIRMRASPARDHVLAA LRGLKLRKIHPTISDDQLFGGLDLAATLESSHLVENTSFFDDKTNALLVMAERCGTGL AAKLAQILDRDAGHMLIALDEGAEADEHAPPALADRLALHIEPEGRMPEGWQPAPAGT SALDPRHVTVSAGDIQTLAEIAAVFGIDSLRAPLLALRVARAHAALNGRDKVTDSDLN VAAELTYPHRATRLPQEPDAAEDPPAPPEDSPEDDAAGDSDTLSLPEGDMLVEAVKAL LPPDLLAGLAPAGTSRGASGAGAGQKRKGNRRGRPLPSRPGRLDGRARIDLVATLRAA APWQPLRQRAVPTRTGLHIRPSDIRLKRYQEQSDRLLIFTVDASGSAAMSRLNEAKGA VELLLAQAYAARDHVALVAFRGEGAELLLPPTRSLVQTKRRLASLPGGGGTPLAAGLQ QAALLAQQSRSKGLTPTVVVLTDGRANIALDGTPDRTAAQADSEQMAQIIQTQNIAAL VIDMSKRPQEPLRALSARLGAPYLALPRADAERLTGAVNAALDA" gene 124455..125327 /gene="bchO" /locus_tag="RD1_0124" /db_xref="GeneID:4198388" CDS 124455..125327 /gene="bchO" /locus_tag="RD1_0124" /EC_number="6.6.1.1" /codon_start=1 /transl_table=11 /product="magnesium-chelatase 30 kDa subunit" /protein_id="YP_680545.1" /db_xref="GI:110677538" /db_xref="GeneID:4198388" /translation="MRWPPPKDWPHADHSRQVFCHPHRWHVQEFGAGPTVLLLHGAGG STHSFRDLATALSKNHHVVAIDLPGQGYTQLGARHRSGLASTTEDIVALCAQEGWQPV AIIGHSAGGALALRLSERVFSPQEQTPRVIGINPALDNFKGLAGVLFPVLAKLLAAVP FTAQIFASATSSPARIAALIRSTGSELDAQGLSYYQRLISNRNHADATLMMMAQWSLD DLLRDLPTIPAQTLFIVGDKDATVPPSVSDKAAQKLQNARVIHLEHLGHLAHEEAPEE IARLILAFLSDHGA" gene complement(125483..125716) /locus_tag="RD1_0125" /db_xref="GeneID:4198389" CDS complement(125483..125716) /locus_tag="RD1_0125" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680546.1" /db_xref="GI:110677539" /db_xref="GeneID:4198389" /translation="MDNRKLTSLFEITGSLSAMVYAVLIASNTGNEILGFSLLLISAS LFAAWAVIDRRWTFLMLQAFYGGSAILGLVRWG" gene complement(125920..126339) /gene="cycA" /locus_tag="RD1_0126" /db_xref="GeneID:4198390" CDS complement(125920..126339) /gene="cycA" /locus_tag="RD1_0126" /codon_start=1 /transl_table=11 /product="cytochrome c-551" /protein_id="YP_680547.1" /db_xref="GI:110677540" /db_xref="GeneID:4198390" /translation="MTRTLAVVLAMTFSAAPVFAEGDIEAGEKAFNKCKSCHQIVSDA GEEIVKGGRTGPNLYGVLGRQAGTADFRYGDDLVAAGEAGLVWDADNFVEYVTDPRAF LRAYLDDSKAKSKMAYKLRSGGEDIAAYLASVSGSSS" gene complement(126413..127627) /gene="hemA" /locus_tag="RD1_0127" /db_xref="GeneID:4198391" CDS complement(126413..127627) /gene="hemA" /locus_tag="RD1_0127" /EC_number="2.3.1.37" /note="catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine" /codon_start=1 /transl_table=11 /product="5-aminolevulinate synthase" /protein_id="YP_680548.1" /db_xref="GI:110677541" /db_xref="GeneID:4198391" /translation="MDFDALFQAQLDTLKEDGNYRIFAELERQAGKFPQAKCHNEDSP DQVTVWCSNDYLGMGQHPTVINAMKGAIDAYGAGAGGTRNISGTNHAHKLLEAELADL HHKDDALLFTSGYVSNWAALSTLGSRLHDAVILSDELNHASMIEGIRHSRANKVLWKH NDPEDLDRKLSALPANCPKIVAFESVYSMDGDICPMKEIVEVAEKHGAMTYLDEVHAV GLYGPRGGGISEREGLQDRITLIEGTLGKAYGVVGGYITGSEAMCDFIRSFASGFIFT TALPPAVATAAQASIRHLKQSDQERKLQQERVAYLRKRLDMEGIPHLENPSHIIPVMI GDPVKCRMIADYLMQQYGIYVQPINYPTVPKGTERLRFTPGPLHSIEDIEHLVLALKE LWKQCAISHAVA" gene complement(127617..128438) /gene="puhE" /locus_tag="RD1_0128" /db_xref="GeneID:4198392" CDS complement(127617..128438) /gene="puhE" /locus_tag="RD1_0128" /codon_start=1 /transl_table=11 /product="PuhE protein" /protein_id="YP_680549.1" /db_xref="GI:110677542" /db_xref="GeneID:4198392" /translation="MSIWSASLLALFVWWFSTGAILWVVKVADRRGGNAGTLATLWGL PMLALGIFGFWSTLDDMSAQGAVLAFLSALAIWGWIELAFLTGVITGPNTYPLPPNTP EWERFIRAWGTLAYHEMLLVFTLISMFLVEWNMMAGNKFATWTFAVLFFARISAKLNL FWGVPRINVDFLPNALAHLATYFRIRPLNWLFPISVSALTFAAACWLERMHGAETQGQ IIGFALLSVITALALLEHWVMVLPIPDEKLWRWMLPAPKQPTPKATTLKGGHHGL" gene complement(128440..129477) /gene="acsF" /locus_tag="RD1_0129" /db_xref="GeneID:4198393" CDS complement(128440..129477) /gene="acsF" /locus_tag="RD1_0129" /EC_number="1.14.13.81" /codon_start=1 /transl_table=11 /product="magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase" /protein_id="YP_680550.1" /db_xref="GI:110677543" /db_xref="GeneID:4198393" /translation="MDSESATEVAMQNTLLTPRFYTTDFDELDAIDVSSVREDWDKLI AQMVSDPNKGHFKKNEDWDHVDWENMEPTLKKEFLDFLISSCTAEFSGCVLYKEMKRR GNNKDITQLFQLMARDEARHAGFINDALREAGVAVNLGFLTQKKKYTYFRPKFIYYAT YLSEKIGYARYITIFRHLEKHPEHRFHPIFKWFEEWCNDEFSHGEAFALLMKTDPKLT SGKNVLWIKFFLTAVYSTMYVRDHQRPAFHKALGVDPDWYAHEVFTKTSELTKQIYPI TLDIEHPRWQRGLEKMQKANADLAEATQNGKFFAKIGAQARAVSAFISLITIPAKKHK VPTETLMRPAY" gene complement(129552..129848) /locus_tag="RD1_0130" /db_xref="GeneID:4198394" CDS complement(129552..129848) /locus_tag="RD1_0130" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680551.1" /db_xref="GI:110677544" /db_xref="GeneID:4198394" /translation="MGLLTKDFERAPCTVEISHKFESLHAHVRFNNGAVIYPGDEVQV HGGEIMAPFGEVISEDREATIIRASKLERLWTRLTGDFEVMELCEFSFSEEVKL" gene complement(129869..130336) /gene="puhC" /locus_tag="RD1_0131" /db_xref="GeneID:4198395" CDS complement(129869..130336) /gene="puhC" /locus_tag="RD1_0131" /codon_start=1 /transl_table=11 /product="PuhC protein" /protein_id="YP_680552.1" /db_xref="GI:110677545" /db_xref="GeneID:4198395" /translation="MATHTQPRIHAKEEDLVPRIMVRIMFGLVLTILGIVTVATLTGR APDSQPPVGALLSERAIYLSGDASGAARVLDEHGTLLADFTPQNGGFVAGIERVIARE RGKSGIDMSAPILLQLREGNRLSITDPVTGWSAELMGFGATNSRTFARLLDKP" gene complement(130342..130980) /gene="puhB" /locus_tag="RD1_0132" /db_xref="GeneID:4198396" CDS complement(130342..130980) /gene="puhB" /locus_tag="RD1_0132" /codon_start=1 /transl_table=11 /product="possible photosynthetic co" /protein_id="YP_680553.1" /db_xref="GI:110677546" /db_xref="GeneID:4198396" /translation="MSHDDFEIEPVEGLPAKPPKGENILWQGRPDWWRLAVESLNVKW VAGYFILLALWRFVSQLDLLPLGQAIGAAVPFLLLGLVTCGMLTLVAVAQARATVYTV TDARVAMRIGAALNVTLNIPYTQVGNAMLDLRPGKTGTIALETIGETRLSYLTCWPHV RPWHFREAQPALRCIPDAERVARLLSEAAEARVSVPTVTRARPQAAQAVAAE" gene complement(131068..131835) /gene="puhA" /locus_tag="RD1_0133" /db_xref="GeneID:4198397" CDS complement(131068..131835) /gene="puhA" /locus_tag="RD1_0133" /codon_start=1 /transl_table=11 /product="photosynthetic reaction center H subunit" /protein_id="YP_680554.1" /db_xref="GI:110677547" /db_xref="GeneID:4198397" /translation="MTAAFFGEFDLASLSLWLFYIFFAGLIIYIQRENMREGYPLEDD EGNPSSNPSMWPVPSDKTFKLPHGRGEVTVPSGQTPERADIALKRTGPGNGFPLEPTG DPMLDGVGPASWAPRRDAPELDGHGHPKIVPMSAAEGFIVSAGRDPRGLPVMSGDKEI VGKITDMWIDEPEQLVRFLEFELEGKWGSGTRLVPMTFANIKSNRVNIAALYGEHFAN VPTIASPRQITLLEEDKIAGYYGGGKLYAGTRQEPKL" gene complement(131858..133291) /gene="lhaA" /locus_tag="RD1_0134" /db_xref="GeneID:4198398" CDS complement(131858..133291) /gene="lhaA" /locus_tag="RD1_0134" /codon_start=1 /transl_table=11 /product="LhaA protein" /protein_id="YP_680555.1" /db_xref="GI:110677548" /db_xref="GeneID:4198398" /translation="MNVAGLKRLSLKAMPFADAASDGLPLPQLLRLSLFQISVGMAAV MLLGTLNRVMIVELTVPAMVVAVMIALPVLIAPFRTLLGFRSDTHRSAIGWKRVPYIW FGTLWQFGGLAIMPSALLVLGGDVYIDVPFAGEILAALAFVMTGLGMHMTQTAGLALA SDRATDETRPRVVALLYVMFLVGMGISSLIIGFLLRDFTPLKLIQVVQATAVITAVLN LIALWKQESLQPMSRTEREAPRPRFKDAWDDFIKGGQAGRLLACIFVGTMAFNMQDVL LEPYGGEILGLSVSSTTLLTAMWSLGALLGFALAGKRLAEGSDAFRLAAGGILAGVGA FCMVIFAAPLNSPALFFSGAGMIGFGGGLFAVATLTACMTLPETGMAGRGLALGAWGA AQATAAGLSIAIGGSLRDWTGSIAMSGAWGEGLVSPATGYSVVYHLEIVLLFVTLVIL GPLVRRRVYHTTRESGSRPMGLADFPT" gene complement(133288..134016) /gene="bchM" /locus_tag="RD1_0135" /db_xref="GeneID:4198399" CDS complement(133288..134016) /gene="bchM" /locus_tag="RD1_0135" /EC_number="2.1.1.11" /note="catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine" /codon_start=1 /transl_table=11 /product="Mg-protoporphyrin IX methyl transferase" /protein_id="YP_680556.1" /db_xref="GI:110677549" /db_xref="GeneID:4198399" /translation="MRDEVTLSTGATPAAQQRYSATLGRVETYFDKTATRTWERLTSD APVSKIRQTVRQGRDRMRDLMLSRLPADLTGHRVLDAGCGAGQMTIELAARGAEVLAT DISPSLVQIAEARLPEDLRKQVTFTSGDMLCHTLGQFDHVIAMDSLIYYDETDIGRAL AALEARTGGSIVFTVAPRTKALMAMWYAGKLFPRSDRSPVMIPHDAGRLARAALAQGV SGQVAPVERVTSGFYISQLMEVRV" gene complement(134016..134915) /gene="chlL" /locus_tag="RD1_0136" /db_xref="GeneID:4198400" CDS complement(134016..134915) /gene="chlL" /locus_tag="RD1_0136" /EC_number="1.18.-.-" /note="light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production" /codon_start=1 /transl_table=11 /product="protochlorophyllide reductase iron-sulfur ATP-binding protein" /protein_id="YP_680557.1" /db_xref="GI:110677550" /db_xref="GeneID:4198400" /translation="MSPLDRTPPSLRGQDGEGSVQVHQDETAKIEGAKVFSVYGKGGI GKSTTSSNLSAAFSMLGKRVLQIGCDPKHDSTFTLTGSLVPTVIDILKEVDFHPEELR AEDFVFDGFNGVKCVEAGGPPAGTGCGGYVVGQTVKLLKQHHMLEDTDVVIFDVLGDV VCGGFAAPLQHADRALIVTANDFDSIYAMNRIIAAVQAKSKNYKVRLAGCVANRSRET DEVDRYCDTVGFNRIAHMPDLDAIRRSRLKKKTLFEMPDDEEIVQVRKEYIRLAETLW NGTEPLAPAPLPDRDIFELLGFD" gene complement(134968..138540) /gene="bchH" /locus_tag="RD1_0137" /db_xref="GeneID:4198401" CDS complement(134968..138540) /gene="bchH" /locus_tag="RD1_0137" /EC_number="6.6.1.1" /note="involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH" /codon_start=1 /transl_table=11 /product="magnesium chelatase subunit H" /protein_id="YP_680558.1" /db_xref="GI:110677551" /db_xref="GeneID:4198401" /translation="MRDEVGINGQLPGYRVVVVTLDSHAAGPAMRAAERLSADYPGLD VSIHAAAEWGETPGTFEAAKAAVETGDIIIANLLFLEEHYARILPSLEARRPHCDAMI GVIADASIVKLTKMGALDMMAPKSGAMKLMKKLRGSSKPSSSSGADKMALLRRLPKIL KFIPGKSQDLRAWFMSMQYWLGGSDDNVEAMMRFLLNRYARNPGWAKAPEAPAPIEYP DAGLYHPDLPTRITTDLNDLPRPEGATATVGLLLMRSYVLSSDTAHYDAVIRSFEARG IAVRAAFAGGLDGRPAIDAYFRDQSGTQIDAMVSLTGFSLVGGPAYNDNDAAIAVLKD LDVPYLAAHPLEFQTLEQWACSTQGLGPIETTMLIALPELDGATNPTVFAGRHGTAGC HGCNHDCEMKSDHKAMAPCIERVDSLVEKTIRMTTLRRKTNAEKTLGIVLFGFPPNAG AVGTAAYLSVFESLFNTLHRLKADGYDVEVPETVDALRDKVLAGNARQYGQEANVADH VTADTIVKTTPPLAAIEAVWGPAPGRIQSDGRGVFILGAHFGKVFVGVQPAFGYEGDP MRLLFEKGFAPTHAFTTFYLWLRNTLKADAILHFGMHGALEFMPGKQAGLGARDWPDR LIGEMPNIYLYASNNPSEASLAKRRSGAVTITHLTPPLAASGLYKGLLDLKDSLTRWR AMDQDSDERDELQALIAQQADAVDMGDVTPDQLWLKLLETEDALIPDGLHILGKPLSD AARAEYLSIMDHADDATRARVDALLQQETELDAICRALSARYIAPVPGGDLIRSTDIL PTGRNIHAFDPFRMPTAFACQDGAKQAQLLLDTHQTLPRTVALVLWGSDNIKSDGGPI AQALALMGCVPRFDSFGRLAGADLISLEDLGRPRIDVIMTLSGIFRDLLPLQTRMLAE AAQKCAMADEPVELNYIRAHALAYAEKTGCDMAEASLRVFSNAEGAYGSNVNQLVDSS AFGDEDELADAYQARKSFAYGTDGKASSNAALLQSQLAEVDVAYQNLESVELGVTTVD HYFDTLGGIARAVKRAKGSEAAVYIGDQTRGSGKVRTLKEQVALETRSRSLNPKFFEG LLKHGAEGVRQIEAQVTNTMGWSATTGQVDPWVYQRLSETFVLDEDMRQRLADLNPTA SSRMANRLLEAHDRNYWSPDAETLAALQDAADALEDQLEGIAAQ" gene complement(138530..140071) /gene="bchB" /locus_tag="RD1_0138" /db_xref="GeneID:4198402" CDS complement(138530..140071) /gene="bchB" /locus_tag="RD1_0138" /EC_number="1.18.-.-" /note="light-independent reduction of protochlorophyllide to form chlorophyllide a" /codon_start=1 /transl_table=11 /product="light-independent protochlorophyllide reductase subunit B" /protein_id="YP_680559.1" /db_xref="GI:110677552" /db_xref="GeneID:4198402" /translation="MKLTVWTYEGPPHVGAMRVATGMKGLHYVLHAPQGDTYADLLFT MIERRDHRPPVTYTTFQARDLGSDTADLFKQTLQDAYDRFQPEALIVGASCTAELIQD DPGGMSETMGIPIPVIPLELPSYQRKENFGADETFFQIVRTLAKPMARTKQITCNLIG PTALGFRHRDDITELTGLLSDMGISVNVVAPMDATPTDIARIGAAHFNVLMYPETAET AARWMERELGQPYTKTVPIGVGATRDFIAEVAQIAGVAPYLDDSRLRLPWYSRSVDST YLTGKRVFLFGDGTHVIAAARIARDEMGFEVVGLGCYNREMARPVRALARDFGIEALI TDDYLEVESRIEALQPEMILGTQMERHIGKRLGIPCAVISAPVHVQDFPARYSPQMGV EGANVIFDTWVHPLVMGLEEHLLHMFRDDFEFHDAAGPSHHGGHSPKPQAAEPAPQAA PQPENTGTSVEVVWLADAERELKKIPFFVRGKARRNTETFASERGVGEISVDTLYEAK AHYAR" gene complement(140068..141354) /gene="bchN" /locus_tag="RD1_0139" /db_xref="GeneID:4198403" CDS complement(140068..141354) /gene="bchN" /locus_tag="RD1_0139" /EC_number="1.18.-.-" /note="light-independent reduction of protochlorophyllide to form chlorophyllide a" /codon_start=1 /transl_table=11 /product="light-independent protochlorophyllide reductase subunit N" /protein_id="YP_680560.1" /db_xref="GI:110677553" /db_xref="GeneID:4198403" /translation="MTELPRLPAQGGCSNAPILKQRGQREVFCGLTGIIWLHRKMQDA FFLVVGSRTCAHLLQSAAGVMIFAEPRFGTAILEETDLAGLADAQAELDKVVDQLLAR RTDIKQLFLVGSCPSEVIKLDLSRAAERMTEKYAPSVRVLNFSGSGIETTFTQGEDAC LASMVPVLPKTDTRQLLLVGALPDVVEEQAVSLLEQMGIGPIKVLPAPRADTDLGIGE NTVFALTQPFLGDTHGALERRGARHLPAPFPFGEEGTTAWLRVIADEFGVDADTFERV TAAPRARARKAISQASEALRGKTIFFFPDSQLEIPLARFLTRECGMEAIEVGSPFVHK GIIGSDLEMLAQGPVISEGQDVDLQLDRCRAARPDLTVCGLGLANPLEAEGLATKWAI ELVFTPVHFYEQAGDLAGLFSRPVRRAGLLKVEAAE" gene complement(141351..141875) /gene="bchF" /locus_tag="RD1_0140" /db_xref="GeneID:4198404" CDS complement(141351..141875) /gene="bchF" /locus_tag="RD1_0140" /EC_number="4.2.1.-" /codon_start=1 /transl_table=11 /product="2-vinyl bacteriochlorophyllide hydratase" /protein_id="YP_680561.1" /db_xref="GI:110677554" /db_xref="GeneID:4198404" /translation="MNGHASRTSAPTGLYSAEERARRDETVWTTIQGVLAPLQFAVFL VSLVLVVRYLWNGEGYVIATWSIVLKTMLLYLIMVTGAIWEKIVFGQYLFAPAFFWED VFSFAVIALHTAYIWALFSDAMSTTNLMILALTAYGAYVINAIQFILKLRAARLQAAA ASDTTSDTTPEVAA" gene 142189..142971 /gene="ppa" /locus_tag="RD1_0142" /db_xref="GeneID:4198405" CDS 142189..142971 /gene="ppa" /locus_tag="RD1_0142" /codon_start=1 /transl_table=11 /product="regulatory protein Ppa" /protein_id="YP_680562.1" /db_xref="GI:110677555" /db_xref="GeneID:4198405" /translation="MSTDDQTDPRGVMRNRPDSVDVLASTVISVLRDRQAVSCEGLRQ FVLDQISSRVLSKKHFAPDVVLAELRGYRLSVDAIIDLYVPAAARMLGEQWVDDKISF ADVTIGTMRLQALLADASGASCVDHKVGAVRLNALVVIPQNEQHFLGASVVAAQLRRL GCEVAMSYDEDHGALTARLINDVPDLVLVTCGRLETLPSVANTIQVVRKAVGNDPTLA VGGACQVNKQRVMEITGADIVTSVAEEAVAHCLKYVNSPSTS" gene 142968..144395 /gene="ppsR" /locus_tag="RD1_0143" /db_xref="GeneID:4198406" CDS 142968..144395 /gene="ppsR" /locus_tag="RD1_0143" /codon_start=1 /transl_table=11 /product="transcriptional regulator PpsR" /protein_id="YP_680563.1" /db_xref="GI:110677556" /db_xref="GeneID:4198406" /translation="MTTGGNTFWSSGAVPLIEPEFLSSIIAAASDIALVVSAEGIILS VVVNSHSESFGNLKHWEDRPVSEFLTRESIPKFEKAHAAYLLGEVPKKQLELNHSDNA VWQYPVRYTFHRFGHENAALLLGRDLRPIAETQQQLVQAQIALEQGYEARREFDARYR VLLANTKQAVVFVSVQSGRVEDANEAAAALLGLNADALRSSSFAQHFMDRSNVELTES LMNATLAEEEGQVTLTATRTQATVIAHPVVFRAGGQRVLMCRLETKESKAATPDAAAD HALAMFRAGSDAMLFMGPNGVIISVNESFLDLVGAAHLSDVVGRSFGDFLGRGQIDLA VLTEQPQRSGHMRIYATKLVNDLGTRLAVEISATHLADADVAAIGCMIRDVSRTETAR GGSGGTISNAAPAEPARNVMDLVGSAALKDIVAETTDVVEKMCIETAVELTNNNRVAA AEMLGLSRQSLYVKLRKYGLLNKNG" gene 144450..145349 /gene="bchG" /locus_tag="RD1_0144" /db_xref="GeneID:4198407" CDS 144450..145349 /gene="bchG" /locus_tag="RD1_0144" /EC_number="6.1.-.-" /codon_start=1 /transl_table=11 /product="bacteriochlorophyll/chlorophyll a synthase" /protein_id="YP_680564.1" /db_xref="GI:110677557" /db_xref="GeneID:4198407" /translation="MAVTDSIHTRRFPEPAAALRLIKPITWFPPMWAYLCGVVSSGVS PVGNWTLVLLGVVLAGPIVCGMSQAANDWCDRHVDAINEPHRPIPSGRIPGRWGLWIA LAMSVLSLGVGWQLGPWGFGATVVGVLAAWAYSAEPVRLKRSGWWGPGLVGLSYETLP WFTGAAVLSAGAPSLPVIVIAVLYGIGAHGIMTLNDFKALEGDRQMGVNSLPVTLGPQ RAAQVACAVMSAPQVVVVFLLFSWGKPLHAAGVCAVLFVQFWAMTIMFKDPKAKAPWY NGTGVLLYISGMMIAAFALRGLA" gene 145349..146647 /locus_tag="RD1_0145" /db_xref="GeneID:4198197" CDS 145349..146647 /locus_tag="RD1_0145" /codon_start=1 /transl_table=11 /product="PucC family protein, putative" /protein_id="YP_680565.1" /db_xref="GI:110677558" /db_xref="GeneID:4198197" /translation="MLSWFGIMRLGLVQMSLGAIVVLTTATMNRVMVVELAMPAILPG LLVSIYYGTQFLRPRFGHSADQGGQRTPWVIGGVALLAAGAIGAALSVGLMERIAWAG IATAIPSFLLIGLGIGAAGTNLLALLSTRVSAQRQAPAGSLVWIMMIFGLAVTGITAG QLLDPYSHGRLVAVTLGVSAVALTLTCLGIWGQERGEKRVVEKRNGNFRAILRELWVD PRVRIFTIFVFASMLAYNLQDLILEPFAGHVFGLTVGESTKLGGMHHAGALMGMIAVL LGGTVLARWFIVPTRVWVVGGCLLSGVSLVGLAYGGLHAASWPIGANIFVLGLANGAF AVAAIGAMMGLAREGGGGSEGVRMGLFGAAQAIAFGLGSFAGTAMVDLMRWITSQDAV AYGSVFAIEGLVFLVAAVLALRLTSPHADARARPAMMPGE" gene 146652..147830 /gene="bchP" /locus_tag="RD1_0146" /db_xref="GeneID:4198198" CDS 146652..147830 /gene="bchP" /locus_tag="RD1_0146" /EC_number="1.3.1.-" /codon_start=1 /transl_table=11 /product="geranylgeranyl hydrogenase" /protein_id="YP_680566.1" /db_xref="GI:110677559" /db_xref="GeneID:4198198" /translation="MYDVVVIGGGPSGATAALDLVHSGHRVALLDRKGRIKPCGGAIP PRLMQDFHIGDDQLLAKVNTARMISPTGRKVDIPIENGFVGMVDRKDFDPFLRQRAAD AGADYFTGTFVRIERPEGTPVVIYRDKATQEERELPCKLVIGADGAKSRVGLAEVKDA DKVPLVFAYHEIIKAPPKSAIYDPERCDVIYDGAISPDFYGWVFPHGNSASVGMGTEL SSVNLKEATAALRDAAGLSDCETIRKEGAPIPLRPLDRWDNGKDVLLAGDAAGVVAPS SGEGIYYAMVGGRVAATACAATLASGRVKDLRLARQLFMKEHKMVFRVLGSMQNAYYR SDERRERFVSLCHDVDVQRLTFEAYMNKKLVRARPMAHLKIGIKNLAHLTGLVATTRV " gene 147827..148357 /gene="idi" /locus_tag="RD1_0147" /db_xref="GeneID:4198199" CDS 147827..148357 /gene="idi" /locus_tag="RD1_0147" /EC_number="5.3.3.2" /codon_start=1 /transl_table=11 /product="isopentyl-diphosphate delta-isomerase" /protein_id="YP_680567.1" /db_xref="GI:110677560" /db_xref="GeneID:4198199" /translation="MTIMIPAWVNGTLTSVEKLEAHVKGLRHKAVSVFVLKGDAVLMQ QRAMCKYHTPGLWTNTCCTHPEWDEAPEVCAIRRLDEELGVRGLIPQHRHHLEYRADV GGGLIEHEVVDVFVAEADETLVVLPNPDEVMAVEWVHFDDLVDQVAQHPDRYTPWLRI YLRDHAATIFGELALL" gene 148820..149530 /locus_tag="RD1_0148" /db_xref="GeneID:4198200" CDS 148820..149530 /locus_tag="RD1_0148" /codon_start=1 /transl_table=11 /product="transglycosylase SLT domain protein" /protein_id="YP_680568.1" /db_xref="GI:110677561" /db_xref="GeneID:4198200" /translation="MHNCKRFVYLFWVFLSSGFAFEAEASTQNSAARHVCDQAAVQAA RSSDVPLSVLKAIARTESGITVDDQFAPWPWTVNSEGRGVRFSSAEEAIEYVGLNRQR GVSNIDIGCFQINYKWHGANFSSVQEMFNPYKNALYAANFLTSLYNEFEDWTKAAGAY HSRNTEHSDLYLAKYIPILEQLDQTGRLSGAQKQSVTKANSFPLLIGQPADSTRGSLF PLAASSRGNLLVSSGRKN" gene 149533..151617 /gene="flhA" /locus_tag="RD1_0149" /db_xref="GeneID:4198201" CDS 149533..151617 /gene="flhA" /locus_tag="RD1_0149" /note="membrane protein involved in the flagellar export apparatus" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein A" /protein_id="YP_680569.1" /db_xref="GI:110677562" /db_xref="GeneID:4198201" /translation="MENLTVKALFNPTILLAIALMTVIVMMILPVPSWVLDAGLAASF ALAILIFTVTLFIERPLDFSAFPTILLASLMLRLSLNVSSTKLIIGQGHTGTDAAGEV IEGFAQFVMGGSVFLGLVVFSVLLIVNFMVITKGATRMAEVGARFALDGMPGKQLAID SDMAAGAITHTEAKERREREQQETTFFGSLDGASKFVKGDAIAGLLITLLNLVAGLIM GIAVHGMPLGQAFETYAILTVGDGLVSQIPAVVISIASALLLARGGAQGATDLAVFAQ LGRHPSALATVGVLMALFAFFPGLPFVPFIVGSLALGFVAYRLHVKQKAEPQEVLALQ DESETPKEAVLGDILEIDDIHVEFSQDLVNMVLDPGTGLDARISNMRTHVATVYGLIL PEIRLTDNAGLPVGTYVLKIQGVEQARAQLNPDQVLALVPENPVNLPSGTDTNEPVYG APARWINRKDQESAALDGLTLVTPAEILATHLLETVKRNFSRLLTLKSLRRLLTEMTN ISNPARAEANRKLLDEMIPDKVPIDVLHSVLRLLLDEQVSIRNLPLILEATAEARGRN SQVEAICEHVRQRLGFQLVAEMRREDGTLPLIQLAPEWEDTFTMYQVEADRGLDIALP PDLFNKLAENVSEKLQTANQNGINAALVTNTKRRRFLKTVMRAKGINNPVFSFEEIGL DARPSLVGVVAQ" gene 151614..152384 /gene="fliR" /locus_tag="RD1_0150" /db_xref="GeneID:4198202" CDS 151614..152384 /gene="fliR" /locus_tag="RD1_0150" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliR" /protein_id="YP_680570.1" /db_xref="GI:110677563" /db_xref="GeneID:4198202" /translation="MIALQEFFPFLNSAIWHGFVVFCRVAALAAVLPAFGEQTLSARV KLAAALAFTVIVAPALPIIPAPGSIGAVSFVILTEVVAGLAIGIGLRLFVLALQTAGS IAAQSTSLSQVLGGAAVDPLPAMGYILVIAGLALAVMAGLHVKVAQLIILSYDFMPVG RFANAADLSEWGTSQVAHAFSLAFTLAAPFVILSVLYNFALGAINRAMPQLMVAFVGA PVITLGGLALLLISAPYMLTVWLGAMDRYLADPFGVLP" gene 152381..153469 /gene="flhB" /locus_tag="RD1_0151" /db_xref="GeneID:4198203" CDS 152381..153469 /gene="flhB" /locus_tag="RD1_0151" /note="membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FlhB" /protein_id="YP_680571.1" /db_xref="GI:110677564" /db_xref="GeneID:4198203" /translation="MSAPDEEADKSFEATPQKLLEARKKGEIARSTELLTAASYAGFL LALLLFGESGLLELGSTMAVIIGQSAQIAPLFFEGAGTVPARGIIQSTGSALLPIFVY PALAVMLVLFATRGIVFAPTKVQPKLSKISVISNAKNKFGRTGLFQFVLSFSKLIIYS AILAVFLYHRTNEMVAALQTTPQYTVILLAKICIEFLIYVVIVSAIIGGIDAIWQHFE HLRKNKMSRKEVMDETKNSEGDPYMKQERRQRAQSLAGTQVAVEVAAADVVIVNPTHF AVALKWDRTPGQAPVCVAKGVDETALRIREIATENAVPIHSDPPAARALHATTNIGDQ IAPEHYKAVAAAIRFAENMRKQSKGKVT" gene 153466..153861 /locus_tag="RD1_0153" /db_xref="GeneID:4198204" CDS 153466..153861 /locus_tag="RD1_0153" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680572.1" /db_xref="GI:110677565" /db_xref="GeneID:4198204" /translation="MSKQQLQTIQQVFELKFKKKQGAFLAVLQQEQQLRAQLKKLDTQ LRNSQMDQHQNMQAIGADVIWQSWVERSKKSLNLELAQVLAQKETLLVNVKKDYGRLL VSRELYSTLKNTERTQTQARLLAAAIKGS" gene complement(154208..154609) /locus_tag="RD1_0154" /db_xref="GeneID:4198205" CDS complement(154208..154609) /locus_tag="RD1_0154" /codon_start=1 /transl_table=11 /product="integrase, catalytic domain" /protein_id="YP_680573.1" /db_xref="GI:110677566" /db_xref="GeneID:4198205" /translation="MRCKIACRAMGSLDFVFDAFADGQRFRVLCIVDDCTREALATVV DRSLSGARMTRELENPIRRRGQPDMIVSDNGTEMTSHAVLRCCKDTGVGWQYIARGKP MQNAFVESFNAMLRNERLNEHTLGNLAEEDY" gene complement(155014..155277) /locus_tag="RD1_0155" /db_xref="GeneID:4198206" CDS complement(155014..155277) /locus_tag="RD1_0155" /codon_start=1 /transl_table=11 /product="inverted repeat region" /protein_id="YP_680574.1" /db_xref="GI:110677567" /db_xref="GeneID:4198206" /translation="MKCRFSDEQIICMINEFETGMKAQELCRKYRISDATFYRCKAKG GGINMSGAKKLRALEDENNRLKRMLADAILDNAVLKYLATKNY" gene complement(155374..156426) /locus_tag="RD1_0156" /db_xref="GeneID:4198207" CDS complement(155374..156426) /locus_tag="RD1_0156" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680575.1" /db_xref="GI:110677568" /db_xref="GeneID:4198207" /translation="MLFQNANDLLFAETASLHRLSPQLENRLTKIRGLFRGAGHNPAI GSGLSLGAGYLFQLSPEADTSFIGLGTMRSDNGSEAYGAAANLSFGNGWGFNIALARA EMRYDLFFDATKLPIEQDGELVSGGLSYAVSRQSTIGINARYLNTTIGLRTSDTPIPD DLLPDLELELGTLGLTYEWDLRDDGDYPTDGSLLTLAFSRGFSLADTSRSYDFASANF DVYRTVGSEKVVAGRVSACSASSNAPFFDQCSIGFTDGFRGFTPTQFYDTRLISLQAE YRQRLGSRFGFVAFGGVGWTGETFNALTDNGDRIAGGVGLRYRVSKQFPVDLSVDVST NNDDEEYLYIYVGQRF" gene 156373..156639 /locus_tag="RD1_0157" /db_xref="GeneID:4198208" CDS 156373..156639 /locus_tag="RD1_0157" /codon_start=1 /transl_table=11 /product="inverted repeat region" /protein_id="YP_680576.1" /db_xref="GI:110677569" /db_xref="GeneID:4198208" /translation="MKRSRFSEEQIIGILKEHQAGLGAKELCRKHGISDATFYKWRSK YGGMEVSDARRLKTLESENTKLKKMLAEQMMDVATLKEMLGKNF" gene 156675..157487 /locus_tag="RD1_0158" /db_xref="GeneID:4198209" CDS 156675..157487 /locus_tag="RD1_0158" /codon_start=1 /transl_table=11 /product="integrase, catalytic domain, putative" /protein_id="YP_680577.2" /db_xref="GI:162139376" /db_xref="GeneID:4198209" /translation="MKTKGYNQKRACSLAGIDPRVYRRRSKRPADTELRARMKELASE RRRFGYRRLHILLKREGWQVNWKKLYRLYREEGLTVRKRGGRKRAVGTRTPMAIPQGP NQRWSLDFMSDALEDGRRFRVLNVIDDFSRECLAAVVDTSIGGTRVARELDRIAELRG YPCMVVSDNGTELTSNAMLKWQENRKVGWHYIAPGKPMQNGLVESFNGRMREECLNEH LFPSLRHARRMIAAWRGDYNHYRPHSSLDGLTPWEYHQRSKEDQNLNSANLK" gene complement(159558..159929) /gene="flaF" /locus_tag="RD1_0159" /db_xref="GeneID:4198210" CDS complement(159558..159929) /gene="flaF" /locus_tag="RD1_0159" /note="acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis regulatory protein FlaF" /protein_id="YP_680578.1" /db_xref="GI:110677571" /db_xref="GeneID:4198210" /translation="MNSFAQAQRAYAPTQAPIKTARSTEYEVIARISHRMKRAMQQDD FPALAEALHENNKLWTTLAIDVGNPDNLLPDELRARIVYLADFTRQHSHKVMRKTETA VPLLEINAAILKGLKHEVSGK" gene complement(160000..161250) /locus_tag="RD1_0160" /db_xref="GeneID:4198211" CDS complement(160000..161250) /locus_tag="RD1_0160" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680579.1" /db_xref="GI:110677572" /db_xref="GeneID:4198211" /translation="MSSILTNNSAMVALQTLKSINSDLGKIQSEISTGKTVESAKDNA ATWAISKVMSSDVEGFRAISDSLSLGQSTVGVALDAAEGITDLLTEIKGKIVNSQEEN VDRGKIQTDIVALRDQISSIAGAAQFNGLNLLSNTDNTEGSGTASILSSLDRAGDGTI SPSNIDVSKQDLGTGAAEFGATAVASAGDLIAVSAASAVGPAGATPVISFTADGAAGG ASYRITLTGAAANEWGTTAVNFEYVARDGDTEMDVSNNLLKQMNDYATANEFTNTTFT QDATTGAITVANTGAAADTLGVAVAENLDGTAAGGLAALADIDVSDADGAAAALASIE GLIQTSIDAAASLGSDGKRIETQNEFVGKLMDGLKSGIGSLVDADMEAASAKLQALQT QQQLGVQALSIANQAPQTILSLFR" gene complement(161459..161818) /locus_tag="RD1_0161" /db_xref="GeneID:4198212" CDS complement(161459..161818) /locus_tag="RD1_0161" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680580.1" /db_xref="GI:110677573" /db_xref="GeneID:4198212" /translation="MSNVVGSDVIGALDDVLEKEREALLSGNLEAIGRLLEQKEALIE ELSVLEEIEAKALHDLTGKMKRNQDLLDHALAGIRSVAGRLAAMRRVRSSLDTYDANG TKRSVDMTNDTSLEKRA" gene complement(161811..162113) /gene="cheL" /locus_tag="RD1_0162" /db_xref="GeneID:4198213" CDS complement(161811..162113) /gene="cheL" /locus_tag="RD1_0162" /codon_start=1 /transl_table=11 /product="chemotactic signal-response protein, putative" /protein_id="YP_680581.1" /db_xref="GI:110677574" /db_xref="GeneID:4198213" /translation="MQLELVRMTELSSVAGKPSNPAARNDKALREAANKMEASFLAEM LKSAGLGKSSSEFGGGAGEDQFASFLVQEQAMMMVKAGGIGLSEALFESLKEKSNE" gene 162209..163546 /locus_tag="RD1_0163" /db_xref="GeneID:4198214" CDS 162209..163546 /locus_tag="RD1_0163" /codon_start=1 /transl_table=11 /product="flagellar hook-length control protein" /protein_id="YP_680582.1" /db_xref="GI:110677575" /db_xref="GeneID:4198214" /translation="MLDILTTQTAPQQMGKTAQNKKIENADSKEQAFDEEYAATGDDV EGTEQQQTDESQAADQQSADEAETKSSDDTSPDTAPEPNAQNSDVTVEEQPAFAIAQG SKAAKTPEAESKTSPTDLSSAKRANMQESAPTMPADAAQPAQKPGVTKTAVSATSAAE AFVTAKAAENAALSASPGMAGNAEKSAVVDPQPPRTSVLKQANTATALVSAPISGEQP SEKLKSLKLSDELAARAVSLRSDSQAQPAPPMVSSPAQTAKLMPLTALSKIDIGKEKM ALDSTSALSIEALSAAETRSASSTSTTPLNQLLARAETPTAIARQMAEALQKLPDRPV EISLNPKELGRVRMNISAAEAGITVTIVTERPETLDLMRRNIDQLVREFQAIGYNDIN FAFSEGETQQGFAETSDERNGAAATQLELLQAEETAESNDTTLNAQTGVDIRL" gene 163556..164236 /gene="flgD" /locus_tag="RD1_0164" /db_xref="GeneID:4198215" CDS 163556..164236 /gene="flgD" /locus_tag="RD1_0164" /note="acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Rhodobacter sphaeroides has 2 copies of many flagellar genes; the Rhodobacter protein in this cluster is associated with a set of flagellar genes acquired by lateral ge" /codon_start=1 /transl_table=11 /product="flagellar basal body rod modification protein" /protein_id="YP_680583.1" /db_xref="GI:110677576" /db_xref="GeneID:4198215" /translation="MDILNAQATQPTRQLGTAQASNSAALSSDFETFLKMLTAQARFQ DPLEPIDSSEYAAQLAQFSMVEQQVLSNDLLTELGAQLGSNSIGQMAAWIGMEARTTA PVAFDGSPITVLPKSEAGADEAYLIAYGPDGSEVQRQQVTPGTDPIEWLGLDDNGAAL PIGNYSFVVESRAVGQTIGTSPAETYSRITEARREGSDTVFILNGGSPVSAADVSALR EASLQSST" gene complement(164233..165567) /locus_tag="RD1_0165" /db_xref="GeneID:4197924" CDS complement(164233..165567) /locus_tag="RD1_0165" /codon_start=1 /transl_table=11 /product="oxidoreductase, putative" /protein_id="YP_680584.1" /db_xref="GI:110677577" /db_xref="GeneID:4197924" /translation="MQRILSAYAYGAGPRAGCWWDETCDLPKLNALQGDLSVDVAIIG GGFTGLSAALHLATQGVKVTLLEAQDIGWGASGRNGGFCCLGGGIAGDDALDSRYGRD ARLGFRNAEKAAVLFVEETINRLGLDVDRHSKGETEFACRPKDMAGLAKMAKRTHENY GVEATVIDQSDLAGLGMTGGPAFFGALSIPIGFGLNPRKLLAGFALAAIDAGADLFAA SPVLGVARNGHGHALKCPQGVVNAQQVIVATNGYSSEDIPIWLASRFMPVQSTVLVTR PLSNAELDAQGWTTEQMGYDSQNLLHYFRLMPDRRFLFGMRGAIRSGPRAEMKARQRT QADFRKMFPAWSTVEISNMWSGMVSLARKKLPFVGEIPASNGIWTAMCYHGNGVAMGS YAGKLVADMVLGRATGECPEVMTKPLTKFPLGRVRRMLLPPVYGQLMLQDRF" gene complement(165567..166385) /gene="potI" /locus_tag="RD1_0167" /db_xref="GeneID:4197925" CDS complement(165567..166385) /gene="potI" /locus_tag="RD1_0167" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter, permease protein" /protein_id="YP_680585.1" /db_xref="GI:110677578" /db_xref="GeneID:4197925" /translation="MNRLSWFNVTSLTLGFAFLYLPMLILIIFSFNESKLVTVWAGFS TKWYGELLQNEAFLDAAWVTIKVAVLSSTLATILGTMAAYVLVRGGRFLGRTLFSGMI YAPLVMPEVITGLSLLLLFIGIGLDRGVLTIVLAHTTFSMCFVSVVVSSRLLTFDRSL EEAALDLGCSPFDAFRLVTLPIIAPAVISGWLLAFTLSLDDLVIASFTAGPSATTLPI KIFSAVRLGVSPEINALSTIMIAIVTVGVVVASLVSKRNMVRQQNDERAAAAQT" gene complement(166382..167257) /gene="potH" /locus_tag="RD1_0168" /db_xref="GeneID:4197926" CDS complement(166382..167257) /gene="potH" /locus_tag="RD1_0168" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter, permease protein" /protein_id="YP_680586.1" /db_xref="GI:110677579" /db_xref="GeneID:4197926" /translation="MQRLFLIAIPYAWLFALFLVPFGIVFKISLSDIALAIPPYTPTL KDGFSAFIAGLDFENFAFLASDDLYWKAYLSSLQIAVLSTFMTLCVGYPIAYGMARAP AEWRATLMMLVILPFWTSFLIRVYAWMGILSQEGFLNQFLLWTGMIGQPLTILNTNTA VYIGIVYTYLPFMILPIYAALDRLDGSLIEAAEDLGCSRLQAFWLVTIPLSKNGIIAG SFLVFIPALGEFVIPSLLGGSGTLMIGKVLWEEFFNNRDWPVASAVAIVLLLILIIPI VLFQRNQQRQAEEES" gene complement(167295..168422) /gene="potG" /locus_tag="RD1_0169" /db_xref="GeneID:4197927" CDS complement(167295..168422) /gene="potG" /locus_tag="RD1_0169" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter, ATP-binding protein" /protein_id="YP_680587.1" /db_xref="GI:110677580" /db_xref="GeneID:4197927" /translation="MNQAVFEPWSDPTQKPLIRFKSVTKQFGSFTAIDDLTLDIFEKE FFALLGPSGCGKTTMMRMLAGFETPTSGVIELAGADIAPLPPNKRAVNMMFQSYALFP HLSVYENIAFGLRRDKVSGDALDARVSEMLKLTRLEKFARRKPHQISGGQRQRVALAR SLAKAPKLLLLDEPLGALDAKLRQATQFELMDIQEKTGTTFVIVTHDQEEAMTVASRV AVMDEGRIMQVETPERIYEAPNSLYVADFIGEVNIISGTARAIGDEQFHIDWAEGNAP FLATSSRPFSEGQPCHLALRPEKVGIHAERPEAAENAVQGKILDIAYLGNLSTYHVAL PGGQIIKAQTANTRRVSRRSYTWEDTVWLSWTSTAGVLLPE" gene complement(168502..169584) /gene="potF" /locus_tag="RD1_0170" /db_xref="GeneID:4197928" CDS complement(168502..169584) /gene="potF" /locus_tag="RD1_0170" /codon_start=1 /transl_table=11 /product="putrescine ABC transporter, periplasmic putrescine-binding protein" /protein_id="YP_680588.1" /db_xref="GI:110677581" /db_xref="GeneID:4197928" /translation="MNKLMITSAVVALCATTVLADEVRVYNWSDYIDESLLEKFEEET GINLIYDVFDSNEVLETKMLAGGSGYDVVVPTGTFLQRQISAGAFQKLDQSKLPNLEN MWDVVKARTEQYDPGNAYSINYMWGTTGIGANINKVQEILGADAPVASLSLIFDPASM EKLSECGVHFLDAPTEMIPAALKYIGEDPDSHDPDVIAKAEAVLAAIRPYVQKFHSSE YINALANGDICVAFGWSGDILQSRDRAAEADNGVEIVYNAPTEGALMWFDQMAIPTDA PNPEGAHAFLNFIMDAENIAAASNYVYYANGNAASKPFLVDDVINDTAVYPDEATLEN LFTVTPYPAKVQRVVTRMWTRVKSGT" gene 169773..170432 /locus_tag="RD1_0171" /db_xref="GeneID:4197929" CDS 169773..170432 /locus_tag="RD1_0171" /codon_start=1 /transl_table=11 /product="transcriptional regulator, putative" /protein_id="YP_680589.1" /db_xref="GI:110677582" /db_xref="GeneID:4197929" /translation="MEYVKLPAHQSVYEDIRDQILFGDMAPGQPVTIQGLADTLKAGM TPVREAIRRLTSDGALNMTGNRRVSVPVITHTCLEELEFMRKTLEPELAFRAVSKITD AAKEMLHAHDDALNSAISQGDIKGYLTHNYHFHAILYQAAQAPIMTATVDRLWLRFGP SLRVVCGRHGTMNLPDKHADLLAALDSKDARCVREAMAEDVHQGIIQIREALDATMKP D" gene 170510..171907 /locus_tag="RD1_0172" /db_xref="GeneID:4197930" CDS 170510..171907 /locus_tag="RD1_0172" /codon_start=1 /transl_table=11 /product="putative aminotransferase" /protein_id="YP_680590.1" /db_xref="GI:110677583" /db_xref="GeneID:4197930" /translation="MSAISNHMPTAELQALDAAHHMHPFTSNEVLATKGARVITRADG VYLTDSDGNRILDGMAGLWCVNIGYGRPELAEVAARQMKELPYYNTFFMTTHVPAIAL AQEVTKLAPAGMNNIFFASSGSEANDTNIRLVRTYWAQKGKPQKSHIISRKNAYHGSS VGSGSLGGMTYMHEQGGMPIAGIHHINQPDWWSEGGDMTPEEFGVARAKELEAKINEL GEDNVAAFIAEPVQGAGGVIVPPETYWPEIQRICDEYEILLIADEVICGFGRLGAWFG SEVMGIKPHIMTVAKGLSSGYQPIGGSIVCDEVAEVIGQTEFNHGYTYSGHPVAAAVA LENLRILQEENIVEHVRTVAAPALKAGLETLADHPLVGDVSCKGLMASLALTPHKESR AKFASERGTIGTICRERAFANNLVMRHVGDRMVVSPPLIIQQNDIDTLVERAGKALDE AYSEIKSEGLLKAAS" gene 172145..173260 /locus_tag="RD1_0173" /db_xref="GeneID:4197931" CDS 172145..173260 /locus_tag="RD1_0173" /codon_start=1 /transl_table=11 /product="polyamine ABC transporter, ATP-binding protein, putative" /protein_id="YP_680591.1" /db_xref="GI:110677584" /db_xref="GeneID:4197931" /translation="MGSQTLAEKSSNDSFVEFDRVQKSYDGENLVVKDLNLFMPKGEF LTMLGPSGSGKTTCLMMLAGFETATHGDIRLDGVSINNIPPHKRGIGMVFQNYALFPH MTVAENLSFPLEVRKMGKSDREAKVKRALDMVQMGDFAGRRPAQLSGGQQQRIALARA LVFEPELVLMDEPLGALDKQLRETLQFEITNLAHALGITVVYVTHDQTEALTMSDRVA VFDDGRIQQLAPPDKLYEEPENSFVAQFIGENNTLEGVVKEIKGDHCLIQLDDGGLID AKPINVSAVGERTRVSIRPERVEYNKDRLSPDAHTLHAEVLEFIYMGDIFRTRLRVAG IDEFVIKTRNAPDVDRLKPGQSIEIGWLPEDCRALDA" gene 173380..174486 /locus_tag="RD1_0175" /db_xref="GeneID:4197932" CDS 173380..174486 /locus_tag="RD1_0175" /codon_start=1 /transl_table=11 /product="ABC transporter, substrate-binding protein, putative" /protein_id="YP_680592.1" /db_xref="GI:110677585" /db_xref="GeneID:4197932" /translation="MKLTKLLLASTALTLAAGSAFAEVEMANEMTIVSWGGAYSNSQQ QAYHNPYMEKTGVTIINDESSAEAVSKLRAMNEAGNITWDVVDVVAADALRLCDEGLA MEIDADEMLAPAPDGTPASEDFGDLLVGDCFIPQIVYSTTVGYRTDMVGDTPPTSICA LFDTEGYPGKRALEKRPINNMEWALLCDGVAKDDVYDVLETDEGQQQALDKLATIKDD VIWWSAGADTPQLLADGEIVMGSTYNGRLFSVIEEQKQPVGMLWDAQVFDLDGWIIPA GLPEDRLARALDYVYFATDTQRLADQSKWISYGPARASSAPLVSTHAELGIEMAPHMP TDPENAKNTFLYNYEFWADYRDDIDAKFQAWLAQ" gene 174559..174846 /locus_tag="RD1_0178" /db_xref="GeneID:4197933" CDS 174559..174846 /locus_tag="RD1_0178" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680593.1" /db_xref="GI:110677586" /db_xref="GeneID:4197933" /translation="MPKGYIIGNISLRDADAYKPYSLRNDEIVPRHGGKFLARGGRSQ ILEGDSHDRQVIIEFPSYEDALAFYNDPDYQENMKIRQANADGSILVVEGV" gene 174850..176490 /locus_tag="RD1_0179" /db_xref="GeneID:4197934" CDS 174850..176490 /locus_tag="RD1_0179" /codon_start=1 /transl_table=11 /product="ABC transporter, permease protein, putative" /protein_id="YP_680594.1" /db_xref="GI:110677587" /db_xref="GeneID:4197934" /translation="MTDTAEHSGPMLAADGRPLKASLNRALRRQKMRALLLIAPLLLF VLVTFIAPIADMLFRSVENQIVSDTLPRTTTELATWDADSGEIPSQETFNALFKDVFI AAERKAHTRLGSRLNYELTGVSSLFRKSGRSVDDMAEVYQDQFEDLNDFWKEGENWSQ LMGSASWLTAMNGWNEDSGQAQPVFEVRDDIAAALPETTAIYEEFATFVQIEEEERLT TEDPWAVVYAALYEDMAGGADLSGISGAGSAELLAAAEAAATFETVDYTAAFYEVDED WHDIDVWQTIQTYTPDFTSGYFLNAVDMKKSPDGPEMRPENEQLHIMLFMRTLFMSLV ITGSCILLGYPVAWILANLPARTANLLMILVLLPFWTSLLVRTSAWKVMLQQQGVVND TLVWLGIVADDSRLALINNQTGTIIAMTHILLPFMILPLYSVMKTIPPSYLRAAKSLG ATNWTAFWRVYFPQSVPGIGAGSILVFILSIGYYITPEIVGGTTGTFISNRIAYHISS SLNWGLAAALGAILLAVVLALYWAYDRIVGIDNVKLGG" gene 176830..177672 /locus_tag="RD1_0180" /db_xref="GeneID:4197935" CDS 176830..177672 /locus_tag="RD1_0180" /codon_start=1 /transl_table=11 /product="ABC transporter permease protein, putative" /protein_id="YP_680595.1" /db_xref="GI:110677588" /db_xref="GeneID:4197935" /translation="MPYLTPGQVLWHYTFRVICGAILVFLITPILVVMPLSFNAENFF TFTPEMLRFDPAGYSLKHYEDFFTNSDWQGALANSIKIAPAATLLSVTFGTLAAIGLS QPHVPFRRAIMAILISPMIVPLIISAAGMYFFYSRIGLQGTYMGVVLAHAALGIPFVI ITVTATLVGFDNSLTRAAANMGANPVTTFFRVQMPLILPGVISGGLFAFITSFDEVVV VLFVGSAGQKTLPWQMFTGLREQISPTILAVATILVLVSIALLTVVELLRRRSERLRG MSPT" gene complement(177764..179119) /locus_tag="RD1_0181" /db_xref="GeneID:4197936" CDS complement(177764..179119) /locus_tag="RD1_0181" /codon_start=1 /transl_table=11 /product="transglycosylase, putative" /protein_id="YP_680596.1" /db_xref="GI:110677589" /db_xref="GeneID:4197936" /translation="MKRMIFWSGMLGLVLGVNGAYAQTSGQSLRPVVRPAVAPPVNLV DVAASGTAIERAIRPKLRTDAIKGEAEMALALATSAAEFDAWVAGFKDRAARQGIRSA TLESAFQGVRFDSDVIRRDRNQSEFTKTIWQYLASAASDRRIANGKAALAKHRTTLEA IERRYGVEKEVVVAVWGLESGYGAYRGSNDVIRSLATLAYEGRRGAFFEEQLIAALKI LQNGDTAPRNMTGSWAGAMGHTQFIPTSYLAYAVDFTGDGRRDIWSEDPTDALASTAA YLKNAGWKTGQPWGVEVQLPQGFDYAQANRITRKTPGAWARLGVRDMSGRKVANHGRA AILLPAGAEGAAFMIFDNFAAIERYNAADAYVIGVGHLSDRIKGGGPIRSSWPTDERA LTFAERKEIQQRLTHAGFNTQGVDGRIGPKTTDAIRAFQRNRGLVADGYASSALLQKL R" gene 179316..180008 /locus_tag="RD1_0182" /db_xref="GeneID:4197937" CDS 179316..180008 /locus_tag="RD1_0182" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680597.1" /db_xref="GI:110677590" /db_xref="GeneID:4197937" /translation="MIKLLTFPPAFGLFAASPFCVKAAYLLNMSGQKWEREDMLDPRK MPYGKLPAIRAGERLIADSDRIQTYLESEGADFNKGLSDLDKANARAFIRMSEEHLYF HLVLDRWADDAIWPKVRDVYFSQVPPGLRHVIAAGVRRKTLSGLHSQGLGRLSQEERL ARIEPDIDAITMRLRHSHFLFGDQPTAADASVAPMLAAATASPGVTLMGRMIEGNEVL MAYIARVDESCG" gene complement(180005..182260) /gene="rnr" /locus_tag="RD1_0183" /db_xref="GeneID:4197938" CDS complement(180005..182260) /gene="rnr" /locus_tag="RD1_0183" /EC_number="3.1.-.-" /codon_start=1 /transl_table=11 /product="ribonuclease R" /protein_id="YP_680598.1" /db_xref="GI:110677591" /db_xref="GeneID:4197938" /translation="MSSLPTKNDILEWIEQNPTLTAKRDIAKAFGIKGAARIDLKRVL KELEADGHLEKRNRSYQDPERLPPVSVLLVTGPDDDGDLYAKPMEWHGTGQEPVVLLI PRASDPAMGAGDRILARLTLVKNDTHHYEARLIRRIGTNPRRVVGVFRQTAEGGRIQP IDKGSDKEWQVASGATHGAKDGELVEAEQAGPKARLGLPRARVVERLGDPSAPKAVSL IAIHQHGIPDSFPDDVIAAADAAKPVGPEGRKDLRDLPLITIDPSDARDHDDACFARA DHDPKNEGGHVVWVAIADVAAYVTPGSALDREARKRGNSTYFPDRVVPMLPDRLSGDL CSLHEGVPRACIAVEMVLDADGNKLRHRFYRALMQSPASLHYEEVQAAIDGTANDRTQ PLLELVLKPLYAAYAALVSARARRQPLELDLPERRIELAEDGTVTSVSFKERLDAHRL IEEFMVLANVAAAETLIEKKSPLLFRVHEEPSPEKLDALRETARASGYNLAKGQVLKT AHLNRLLNEAAGTEEAELINISTLRSMTQAYYGPINLGHFGLALPRYAHFTSPIRRYA DLIVHRALISAHGWGKDGLRPEDADGLDDTGTHISDTERRSMVAERDTTDRYLASYLS ERVGSEFTGRVSGIARFGIFVKLDETGADGLVPMRSIGNEYFHFDAETMTLMGADSGQ IIGLGQRATVRLAEAAPITGGIALELLELEGAKLARGRRSPAGRTPRKRGVKAKRKAD KIKRKVKRSRR" gene complement(182266..182865) /locus_tag="RD1_0184" /db_xref="GeneID:4197939" CDS complement(182266..182865) /locus_tag="RD1_0184" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680599.1" /db_xref="GI:110677592" /db_xref="GeneID:4197939" /translation="MRRTLAIMLKEPRPGRVKTRLGHEIGMTNAAWWFRHQATALIRR LQDPRWDVVLMVSPDGEGLKSRVWPRGLRRIPQGHGDLGIRMKRALRGQIPGPVCVIG ADIPGIERRHIARAFKALGHADAVLGPAYDGGYWLIGLKNARPARRQLFQSVRWSTEF ALADTVRSLGDFSVAYVDKLQDVDTTADLRMTARGQRAT" gene complement(182862..184007) /gene="dapE" /locus_tag="RD1_0185" /db_xref="GeneID:4197940" CDS complement(182862..184007) /gene="dapE" /locus_tag="RD1_0185" /EC_number="3.5.1.18" /note="dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simil" /codon_start=1 /transl_table=11 /product="succinyl-diaminopimelate desuccinylase" /protein_id="YP_680600.1" /db_xref="GI:110677593" /db_xref="GeneID:4197940" /translation="MPAVDPVRLTADLVRCASVTPADEGALDILHDVLSDAGFDCAWA DRGGIRNLFARWGRKGHPKTFGFNGHTDVVPIGNADDWSMPPFGAEVKDGIMYGRGTT DMKSGVAAFAAAAVDFVRDTPPDGAIVLAITGDEEGDATDGTTALLAYMAAQGEQMSA CLVGEPTCPDRMGEMIKIGRRGSMTAWITFIGKQGHAAYPHRACNPLPALMRLMDRLA SHKLDEGTEFFDPSTLAIVTVDTGNPATNVIPASCSGTVNIRFNDAHSGASLTEWIKT ELSRIEGEFGVQIDLRIKISGESFLTPPGPLSALVSKAVKAQTGIEPVLSTTGGTSDA RFVKDHCPVVEFGLVGQSMHQVDEHVKTDHIVELKAIYSRILTDYFA" gene complement(184075..184428) /locus_tag="RD1_0186" /db_xref="GeneID:4197941" CDS complement(184075..184428) /locus_tag="RD1_0186" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680601.1" /db_xref="GI:110677594" /db_xref="GeneID:4197941" /translation="MTKEKKPSRQQVYTLVVQIGRKEGDGLPKKATGAALVIYASGID EAEAVRETVAILKQADTAPLDVTGYGTLQERLAEGHEISDEERMLMQRALDENAVIVA QMEPFYGTFQSEEAQ" gene complement(184438..185316) /locus_tag="RD1_0187" /db_xref="GeneID:4197942" CDS complement(184438..185316) /locus_tag="RD1_0187" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680602.1" /db_xref="GI:110677595" /db_xref="GeneID:4197942" /translation="MLQVLSDLQSAAVAGCSELALQLSPRLREDLKRVVFDQECKMTA ADVEALHAELMMVASMPNQNHPAFMTATIILLADRLNYGAGEDDLFWNWSAFRDRFRE APSPVRAALMNGFRRADMLGLVALDQRPKGTDLRTYEETDLTRLLKIIARSMTEDMRD AVCTLAPEELRDVHRKALDNCLKSSCILSEFGGWFPSEVVEQVSLDPVHPSYAAATAL MILDAIATRDASGKMAARYEEQADDYILLPTDVRVPLMAGLRHLHEMEEDWEPYADWP VEQRLDKAIVMPFAKP" gene 185318..185413 /locus_tag="RD1_0188" /db_xref="GeneID:4197943" CDS 185318..185413 /locus_tag="RD1_0188" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680603.1" /db_xref="GI:110677596" /db_xref="GeneID:4197943" /translation="MKFFGAAIFLMASDYTAIRAGLYRNLDNTLE" gene complement(185454..186281) /gene="dapD" /locus_tag="RD1_0189" /db_xref="GeneID:4198178" CDS complement(185454..186281) /gene="dapD" /locus_tag="RD1_0189" /EC_number="2.3.1.117" /note="catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway" /codon_start=1 /transl_table=11 /product="2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase" /protein_id="YP_680604.1" /db_xref="GI:110677597" /db_xref="GeneID:4198178" /translation="MSNAELETAIEAAWEARDSISPATKGAERDAIEATLAALDGGGL RVAERQADGNWHVNQWAKKAVLLGFRIKDMEMQSGGAQGGGWWDKVDSKFAGWGEADW KDAGFRAVPNCVVRKSAYIAPGVVLMPSFVNLGAYVDEGTMVDTWATVGSCAQIGKNV HLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKI VDRETGEFTYGEVPAGSVVVAGSMPSKNGVNLYCAVIVKKVDAQTRSKTSINELLRD" gene 186453..187289 /locus_tag="RD1_0190" /db_xref="GeneID:4198179" CDS 186453..187289 /locus_tag="RD1_0190" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680605.1" /db_xref="GI:110677598" /db_xref="GeneID:4198179" /translation="MNRRHPLRHASADRKAIREVPDTPQTRAPEYRLAFADDDFLCRE ELRPVRLQLELLKPQMHLDALGINSTIVLFGGARIPSPSNKDSAATRTLADLSHFYDE AREFARLMTLKSMEAEGKENVIVTGGGPGVMEAGNRGALDAGGRSIGLNIVLPHEQAP NSYVTPELCFNFHYFAIRKMHFLMRASAICVFPGGFGTLDELFEALTLIQTGRMQPVP VLLFGRKFWDSIINWDALADAGTISAEDLELFSFVESAAEAMEIIDRWQDMPTREAMP GR" gene complement(187382..188122) /locus_tag="RD1_0191" /db_xref="GeneID:4198180" CDS complement(187382..188122) /locus_tag="RD1_0191" /codon_start=1 /transl_table=11 /product="protein-disulfide isomerase, putative" /protein_id="YP_680606.1" /db_xref="GI:110677599" /db_xref="GeneID:4198180" /translation="MRRRDLLVGGGIVAVAVAIPPILRRIPTDFEFEPLPGFAGFRRI TGGSVSAASNPFLGLEPPDPSTPAPQRAGSPCVALFGPEGWQTGVVPIAIFSDFNCPY CKVLENRLMERRDAGAPVRLIWHEMPLLGAASRRSAQAVLAARFFDAEEAARAYLSQR FLRPGPVALRAMAHELGLPPDAFAQEVSGPRVAQALATSLDLGRRLGIPGTPGTVIGR TLVIGATNDADLTKLIEIESAQPQMVCA" gene complement(188122..189306) /locus_tag="RD1_0192" /db_xref="GeneID:4198181" CDS complement(188122..189306) /locus_tag="RD1_0192" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680607.1" /db_xref="GI:110677600" /db_xref="GeneID:4198181" /translation="MPANAPITQDVHTIPRKLPDGPVNLVGLTRAAMRDALIAEGTPE KQAKMRVGQIWQWIYQWGVRDFDLMTNLSKAYRAQLKEKFVVEVPEVVTRQVSEDGTR KYLVRIAGGHEVEVVYIPDEGRGTLCVSSQVGCTLTCSFCHTGTQKLVRNLTAAEIIG QVMVARDDLGEWPEIGAPKDETRLLSNIVLMGMGEPLYNFENVRDAMKIAMDPEGIQL SRRRITLSTSGVVPEIARTAVEIGCQLAVSFHATTDDVRDTLVPINKRWNIEVLLEAL RAYPKVSNSERITFEYVMLHGVNDSDEDARRLVKLIDGIPAKINLIPFNEWPGAPYKR SSNNRIRAFADIIYKAGYASPIRTPRGEDIMAACGQLKSATERARKSRKQIAAETGLA GA" gene complement(189417..189947) /locus_tag="RD1_0193" /db_xref="GeneID:4198182" CDS complement(189417..189947) /locus_tag="RD1_0193" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680608.1" /db_xref="GI:110677601" /db_xref="GeneID:4198182" /translation="MRISKSFLGLVGALSLVGSLAAAQEVSNNRVAAKTDWSVFVEDN PKECWSVSVPTETVNTRDGRVVAANRGEILLMVFFRPSANANGQVAFTGGYPFRDGSQ VSVEIGGTEYSLFTDGDWAWPATAADDAKLVAAMKRGADAVVTGISSRGTTTKDTFSL LGFTAATEDAEKRCAG" gene 190121..191101 /gene="ansA" /locus_tag="RD1_0194" /db_xref="GeneID:4198183" CDS 190121..191101 /gene="ansA" /locus_tag="RD1_0194" /codon_start=1 /transl_table=11 /product="L-asparaginase II" /protein_id="YP_680609.1" /db_xref="GI:110677602" /db_xref="GeneID:4198183" /translation="MSQPVPMVEIWRGPFLESMHTGHAVICDAAGGIIEAWGNPDQVV LSRSSSKMIQALPLIDSGAADAMGLTPQHLALACASHGGAPMHTQRVQAWLETLDLTD DALRCGAHMPYDPVTHDQMLIAGEKPCQRHNNCSGKHAGFLTLSKHLGGDSGYIDTDH PVQKAVLEAFERLTSETSPGFGIDGCSAPNFASSLHGMARAMARFAASPEDSAEARLH QAMRLHPELVAGENRACTDLMRATDGKVAIKTGAEGFFNVIIPEQKIGIALKITDGTT RASECAIAAILVKLGVLAPDHPATMKYVNAPILNRRGVTTGHMRAAPALL" gene complement(191109..191984) /gene="serB" /locus_tag="RD1_0195" /db_xref="GeneID:4198184" CDS complement(191109..191984) /gene="serB" /locus_tag="RD1_0195" /EC_number="3.1.3.3" /codon_start=1 /transl_table=11 /product="phosphoserine phosphatase, putative" /protein_id="YP_680610.1" /db_xref="GI:110677603" /db_xref="GeneID:4198184" /translation="MFSITLIAKPGTLAPALADSLRNAWGGGDVVWLSPGGAAEFQVA QKPENLWEVWAEMQGLGVDLVAQPAAGRRKKMLLADMDSTMIEQECIDELADEAGVGE HVKGITARAMNGELDFDAALRERVGLLKGLPVATIEHVLSSRITLMPGGPVLLATMKA NGAHAALVSGGFTAFTQAIASKLGFDENRANTLLAKDGILTGEVGTPILGQQAKVDAL HDITQRLSLAPTDVLAVGDGANDLGMLKAAGTGVALHAKPSVAAQCDIRINHGDLTAL LYLQGYAEQDFVHPA" gene 192308..193471 /gene="serC" /locus_tag="RD1_0196" /db_xref="GeneID:4198185" CDS 192308..193471 /gene="serC" /locus_tag="RD1_0196" /EC_number="2.6.1.52" /note="catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate" /codon_start=1 /transl_table=11 /product="phosphoserine aminotransferase" /protein_id="YP_680611.1" /db_xref="GI:110677604" /db_xref="GeneID:4198185" /translation="MAIQQPATRPAPKPVAVPANPRFSSGPCAKPPTFDLKKLADAPL GRSHRASEGKAKLLKAIETTREVLGVPDDYRIGIVPASDTGAYEMAMWSLLGERHAEM VAWESFGAGWVTDVVKQLKIAHTVHTADYGDIVDMAALNYDHDVCFTWNGTTSGVRMP SGDAIPADRAGLTLCDATSAAFAMDLPWDKLDVTTFSWQKVLGGEAAHGMLILSPRAV ERLESYTPPWPLPKIFRLTKGGKLIEGIFTGATINTPSMLCVEDYLQALDWAKSVGGL QGLIARADANAGAIADFVAAHDWIDFLAKDPATRSNTSVCLRFTDARITDGAAFAKAV AKRLADENVALDIGAYREAPAGLRIWCGGTVETSDITAMLPWLAWAFEAEINA" gene 193514..195109 /gene="serA" /locus_tag="RD1_0197" /db_xref="GeneID:4198186" CDS 193514..195109 /gene="serA" /locus_tag="RD1_0197" /EC_number="1.1.1.95" /codon_start=1 /transl_table=11 /product="D-3-phosphoglycerate dehydrogenase" /protein_id="YP_680612.1" /db_xref="GI:110677605" /db_xref="GeneID:4198186" /translation="MAPKVLISDKLSPAAVQIFKDRGIDVDFQPDVGKDKDKLAEIIG DYDGLAIRSATKATAKIIAAATNLKVIGRAGIGTDNIDKDAASKKGIIVMNTPFGNMI TTAEHAIAMMFAVARQIPEASASTHAGKWEKSKFMGVELTGKTLGVIGAGNIGGIVCD RAKGLKMKVVAYDPFLGEEKAKKMGVEKVELDALLARADFITLHVPFTDQTANILSAE AIAKMRPGVRIINCARGGLVDEEALAAALKSGHVAGAAFDVFSQEPATENPLFNLPNV VCTPHLGAATSEAQENVALQVAEQMSDYLLTGAVSNALNMPSVTAEEAKVMGPWLKLS GHLGAFIGQMTDEPIKAINILYDGSVAEMNLSALNCGVIAGIMKKANPDVNMVSAPVI AQERGITISTTNQSKSGVFDGYIKVTVVTDKRERSIAGTVFSDGKPRFIQIKGIQIDA EVGAHMLYTTNEDVPGIIGTLGQTMGENGVNIANFTLGRAEAKGEAIALLYVDDQVPA PVIKKLEKTGMFTQVKPLIFDVA" gene complement(195174..196205) /gene="tdh" /locus_tag="RD1_0198" /db_xref="GeneID:4198187" CDS complement(195174..196205) /gene="tdh" /locus_tag="RD1_0198" /EC_number="1.1.1.103" /note="converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism" /codon_start=1 /transl_table=11 /product="L-threonine 3-dehydrogenase" /protein_id="YP_680613.1" /db_xref="GI:110677606" /db_xref="GeneID:4198187" /translation="MKALAKLHAREGIWMTQAPVPEIGPDDVLIKINKTGICGTDIHI WNWDEWAAGTVPVPMITGHEFAGEIVEVGRNVTDLSIGQRCSGEGHLIGKTSRQSRAG KFHLDPATRGIGVNEQGAFAQFLKLPAFNVVPLPDDISDDIGAILDPLGNAVHTALSF DLIGEDVLVTGAGPIGIMAAAVARHAGARHVVITDVNADRLALASRVADVVPVNVAQD DLKQTIADLGMKQGFDVGLEMSGNQQALDQMVDAMTMGGRIAMLGIPPGKSPVDWSQI VFKAITIKGVYGREIFETWYKMIAMLQNGLDVSQVITHRFAADEYEAGFAAMKSGKSG KVVLDWTTA" gene complement(196214..197401) /gene="kbl" /locus_tag="RD1_0199" /db_xref="GeneID:4198188" CDS complement(196214..197401) /gene="kbl" /locus_tag="RD1_0199" /EC_number="2.3.1.29" /note="catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine" /codon_start=1 /transl_table=11 /product="2-amino-3-ketobutyrate coenzyme A ligase" /protein_id="YP_680614.1" /db_xref="GI:110677607" /db_xref="GeneID:4198188" /translation="MTQAYLTHISATLDQIANDGMMKKERAITSPQAGNIDVGPKSVI NLCANNYLGLADHPELISAARCAMEPRGFGMASVRFICGTQDLHRQLEARLAQFLQMD DAILFAACFDANGGLFEPLLGPEDAVISDALNHASIIDGIRLCKARRYRYANSDMRDL EGQLQLARDEGARFIMIATDGVFSMDGYLAKLSDIKALADKYDALLMVDDCHATGFMG PQGRGTPAHAGVSADILTGTLGKALGGAIGGYIAGPQPIVDLLRQRARPYLFSNSLPP SIVAAGLKALDLVEAGDDLRAQLFENTAYWRNGLEALNFDLLPGAHPIVPIMLGEAQL AQDMAAQLFDEGVFVSGFFYPVVPRGQARIRTQMNAALSKDDLDKALEAFAVVGRRLG VIK" gene complement(197496..198059) /locus_tag="RD1_0200" /db_xref="GeneID:4198189" CDS complement(197496..198059) /locus_tag="RD1_0200" /codon_start=1 /transl_table=11 /product="DNA-binding protein" /protein_id="YP_680615.1" /db_xref="GI:110677608" /db_xref="GeneID:4198189" /translation="MADDRDDILGQLPARLKDARRVQGLSLDAVAKLSGVSRSMVSQI ERGESSPTISTLWNLTRALQVDFAGLLDVASTQSKIETLRSADVPTIENLGKGLRIRI LSPPEEAGNHEVYELVFSLDGVLDSQPHTRGAREHLTVIEGVVDVTSADNTSRLEAGD TARYSADVPHQIRAIGAARAFLVVQNA" gene 198181..199359 /gene="bktB" /locus_tag="RD1_0201" /db_xref="GeneID:4198190" CDS 198181..199359 /gene="bktB" /locus_tag="RD1_0201" /note="catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA" /codon_start=1 /transl_table=11 /product="beta-ketothiolase" /protein_id="YP_680616.1" /db_xref="GI:110677609" /db_xref="GeneID:4198190" /translation="MTKEIVILDGARTAIGTFGGALAATSPIDLATVASKAALERSGV EGAQIGHVAFGHVINTEPKDMYLSRVAAMQAGVPETVPAMNVNRLCGSGAQAIVSVIQ SLMLGDADFALAGGAENMSRSPFIIPQQRWGAKMGDVKTLDMMLGALNCPFGTGHMGV TAENVAAEHDITRAQQDAFALQSQQRAADAIAAGYFKSQITPVEVRVKRDMVAFEVDE HPKATTLEALSGLRAVFQKDGSVTAGNASGINDGAAAIVLATGDAAQKAGLKPKARVL GYAHAGVRPEVMGIGPVPAVQNLLARTGLSVADFDVVESNEAFAAQALAVSQELGLGA AKVNPNGGAIALGHPVGATGAIITLKAMYELERIGGKRALITMCIGGGQGIALAIERL " gene complement(199369..200916) /gene="ubiB" /locus_tag="RD1_0202" /db_xref="GeneID:4198191" CDS complement(199369..200916) /gene="ubiB" /locus_tag="RD1_0202" /EC_number="1.14.13.-" /codon_start=1 /transl_table=11 /product="ubiquinone biosynthesis protein UbiB" /protein_id="YP_680617.1" /db_xref="GI:110677610" /db_xref="GeneID:4198191" /translation="MRGPHNIWRLIRTGATLERTGAMKVVLDAFEAPRAVRFVARALG IPFKFLGYYGDPSMPPATRALTALGPAYIKFGQILSTRPDVVGDELAVQLRVLQDKLP PFSVAVAKAEVSKELGVPVDQVFSEFSEPVAAASIAQVHRARIASTGEDVAVKVLRPG IERAFNKDVDAFYLAARMVELFAPGARRLRPMDVIEHFDGVVQGELDLRLESSAASEF AATTKDDEGFQLPEIKWDLSARRVMTLGWAAGVPLGDNDAIDAAGHNRVELGNRVLQL FLNHALRDGYFHGDMHQGNLKVAPNGDIVAYDFGIMGHIDEYTRRVYAEILFGFIRRD YKRVAEVHFEAGYVPADKDVDEFARALRAVGEPIFGMDASKISMGRLLNYLFEVTERF GMETRTELILLQRTMVVVEGVARSLNPQINIWEVASPVVSNYISQSIGPRATLKDLAK TARVLARFGPRLPVMVENALIRTSNPQPVRRENSWGKWIVGGLILGVTIGVSGSLTLI AVDLMFF" gene complement(200917..201669) /gene="ubiE" /locus_tag="RD1_0203" /db_xref="GeneID:4198192" CDS complement(200917..201669) /gene="ubiE" /locus_tag="RD1_0203" /EC_number="2.1.1.-" /codon_start=1 /transl_table=11 /product="ubiquinone/menaquinone biosynthesis methyltransferase UbiE" /protein_id="YP_680618.1" /db_xref="GI:110677611" /db_xref="GeneID:4198192" /translation="MTDDSNKTTHFGFETVPEGEKAGRVQGVFSSVASKYDIMNDVMS VGIHRLWKEAMMDWLAPRAGQKLLDVAGGTGDISFRFLKRAGYGHATVLDLTESMLVE GRKRAEAAAMADQLDWVTGDAMALPFADNTFDVYTISFGIRNVTRPQEALNEAFRVLR PGGRLMVLEFSQLPNPAMQKAYDLYSFNVIPRMGQAIAGDRDSYQYLVESIRKFPDQD TFLKMVRDAGFENAKFRNLSMGIACLHSGWKL" gene 201887..202738 /gene="mutM" /locus_tag="RD1_0204" /db_xref="GeneID:4198193" CDS 201887..202738 /gene="mutM" /locus_tag="RD1_0204" /EC_number="3.2.2.23" /codon_start=1 /transl_table=11 /product="formamidopyrimidine-DNA glycosylase" /protein_id="YP_680619.1" /db_xref="GI:110677612" /db_xref="GeneID:4198193" /translation="MPELPEVETVRRGLTPAMEGVVIARADVNRPDLRWPFPADMAAR LTGKRVERLRRRSKYILMDLDSGETLLVHLGMSGRMLVSGDPLGQFVHSHPAPEKHDH VVFHMANNARITFNDPRRFGAMDLMETASADTHKLLSVLGPEPLGNDFHESHLIEAFK NRNSPVKSVLLDQRIVSGLGNIYVCEALFRAKIHPIRKAGKISGARVATLVPIIREVL AEAIEAGGSSLRDFKQADGELGYFQHSFDVYGREGAPCKGEGCTGQIKRIVQSGRSSF YCAQCQR" gene 202803..203579 /locus_tag="RD1_0205" /db_xref="GeneID:4198194" CDS 202803..203579 /locus_tag="RD1_0205" /EC_number="4.2.1.17" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="YP_680620.1" /db_xref="GI:110677613" /db_xref="GeneID:4198194" /translation="MAYETIIVDVEDHVAQITLNRPDALNALNDELMSELANALTAAQ NNDKVRCIILTGSEKAFAAGADISMMKDKSFVEVFSGDLFTAETEEIMRVRKPIIAAV SGYALGGGCELAMMCDFIICSETAKFGQPEINLGVVAGLGGTQRLTRLVGKSKAMDMN LTGRFMDAEEAERSGLVSRVVPCKKLMDEAHGAAQRIAEKSMVSVMVVKEAVNRAYET TLREGLLFERRMFHSLFATEDQKEGMSAFVEKREAQFRDR" gene 203608..204015 /locus_tag="RD1_0206" /db_xref="GeneID:4198195" CDS 203608..204015 /locus_tag="RD1_0206" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680621.1" /db_xref="GI:110677614" /db_xref="GeneID:4198195" /translation="MAHPIKHAMAATLLALGGAAQAEMLPGSEWEPTKMQAQPFESAR DVFIRFEQDGRYFGNGGCNSIRGRFVTNGDAILLGPAAATMMACPEEIMQQEFGFLQT LDSVRQFDRSGTELTLSDAAARVVMRLRQRDWD" gene 204187..204450 /gene="rpsT" /locus_tag="RD1_0207" /db_xref="GeneID:4198196" CDS 204187..204450 /gene="rpsT" /locus_tag="RD1_0207" /note="binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase" /codon_start=1 /transl_table=11 /product="30S ribosomal protein S20" /protein_id="YP_680622.1" /db_xref="GI:110677615" /db_xref="GeneID:4198196" /translation="MANSPQAKKRARQNEARFQINKARRSRIRTFLRRVEEAIASGDK EAATAALRAAQPELMRGVTKGVFHKNTAARKMSRLAARVKVLG" gene 204958..206322 /gene="dnaA" /locus_tag="RD1_0208" /db_xref="GeneID:4198158" CDS 204958..206322 /gene="dnaA" /locus_tag="RD1_0208" /note="binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself." /codon_start=1 /transl_table=11 /product="chromosomal replication initiation protein" /protein_id="YP_680623.1" /db_xref="GI:110677616" /db_xref="GeneID:4198158" /translation="MTKEQWGQLQQRLLKTVGQNNYKNWIEPIEFGSTQDGVATFEVP TNFLGNYVSQNFADLILHEVRQEDPAVRRLRFAVPSHVNATTKPARPAQATAPRAPAE KTPRSTLSTAPLDARFTFDNFIVGKPNELAHAAAKRVAEGGPVTFNPLFLYGGVGLGK THLMHAIAHELRLRRPEMNVLYLSAEQFMYRFVQALRDRKMMDFKEIFRSVDVLMVDD VQFIAGKGSTQEEFFHTFNALVDQNKQIIISGDRAPGEIKDMEERVKSRLQCGLVVDL HPTDYELRLGILQSKVEQQRKNYPGLDISDGVLEFLAHRISTNVRVLEGALTRLCAFA SLVGREIDMELTQDCLSDVLRASERKITVEEIQRKVSDHYNIRLSDMIGPKRLRSYAR PRQVAMYLSKKMTSRSLPEIGRRFGGRDHTTVMHGVKRIEELKIQDGQIAEDLELLRR ALEE" gene 206464..207582 /gene="dnaN" /locus_tag="RD1_0209" /db_xref="GeneID:4198159" CDS 206464..207582 /gene="dnaN" /locus_tag="RD1_0209" /EC_number="2.7.7.7" /note="binds the polymerase to DNA and acts as a sliding clamp" /codon_start=1 /transl_table=11 /product="DNA polymerase III subunit beta" /protein_id="YP_680624.1" /db_xref="GI:110677617" /db_xref="GeneID:4198159" /translation="MKISIERAALLKAVSQAQSVVERRNTIPILANVLIEAEGSDVTF RATDLDIEVVDKAPAQVERAGATTVSATTLHEIVRKLPDGALVTLTADSAIGRLTVEA GRSNFSLATLPKEDFPVMATSEYQSNFSVKAPVLRRLFDKSKFAISTEETRYYLNGVY MHVADADGGHVLRCVATDGHRLARIDADLPEAANDMPGVIVPRKTVGELRKLLDNDEM TIAVSVSETKVRFATPDITLTSKVIDGTFPDYTRVIPQGNTRKLEVDAADFARAVDRV ATVSSERSRAVKLQLDEDRLVLSVNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIA SQVDRENAVFLFNSSGDPTLMREGNDLSAVYVVMPMRV" gene 207640..208740 /gene="recF" /locus_tag="RD1_0210" /db_xref="GeneID:4198160" CDS 207640..208740 /gene="recF" /locus_tag="RD1_0210" /note="Required for DNA replication; binds preferentially to single-stranded, linear DNA" /codon_start=1 /transl_table=11 /product="recombination protein F" /protein_id="YP_680625.1" /db_xref="GI:110677618" /db_xref="GeneID:4198160" /translation="MALHLTDLMVSHFRSHRVARFALDQRPVALFGPNGAGKTNILEA VSLLSPGRGLRRASAQDMTRRPEALGWKITAQVMSLGQHQEVETWSQEGAARQVRING KTAAQTALGRVSRVLWLIPSMDRLWIEGAEGRRRFLDRMTLSFEPGHADATLAYEKAM RERNRLLKNMVREPSWYQALELQMAQAGVVVDQNRRMALRQLAAAQSDATTAFPAAEL ELIHNDAPLPDGETALRDAFADSRSRDLAAGRTLVGPHRADLIGTYRAKGVAARDCST GEQKALLVSLILANARALAQDSGAAPLLLLDEVAAHLDADRRAALYDEITALGAQAWM TGTEKSLFDTLGDGAQYFEITETDGASTVQDG" gene 208737..209357 /locus_tag="RD1_0211" /db_xref="GeneID:4198161" CDS 208737..209357 /locus_tag="RD1_0211" /codon_start=1 /transl_table=11 /product="LysE family transport protein" /protein_id="YP_680626.1" /db_xref="GI:110677619" /db_xref="GeneID:4198161" /translation="MTISTADLLLYAGALIILFLTPGPVWLALMARALSGGFAAAWPL AFGVAVGDILWPLVAVLGISWIVSVFDVFMLVLRWVACGVFIVMGIALIRHARHSISA DSRLTRPGVSAGFAAGVIAILGNPKAVLFYMGVLPGFFDLRDVTGVDVTVIIAASVCI PLIGNLMIAACVGRIRSVITRPQTLARINVISGCSLILVGVLIPVL" gene 209436..211850 /gene="gyrB" /locus_tag="RD1_0212" /db_xref="GeneID:4198162" CDS 209436..211850 /gene="gyrB" /locus_tag="RD1_0212" /EC_number="5.99.1.3" /note="negatively supercoils closed circular double-stranded DNA" /codon_start=1 /transl_table=11 /product="DNA gyrase subunit B" /protein_id="YP_680627.1" /db_xref="GI:110677620" /db_xref="GeneID:4198162" /translation="MSENDQTPEEYGANSIKVLKGLEAVRKRPGMYIGDTDDGSGLHH MVYEVVDNGIDEALAGHADAVTVKIHADSSVSVSDNGRGIPVGIHEEEGVSAAEVIMT QLHAGGKFDSNSYKVSGGLHGVGVSVVNALSDWLELRIWREGKEHVARFEGGFTTRHL EVVGDTDRTGTEVRFMASTETFSNLDYSFETLEKRLRELAFLNSGVRIILIDERPAEE LRSDLFYEGGVKEFVKYLDRSKSSVMPEPIFITGEKDDIGVEVAMWWNDSYHENVLPF TNNIPQRDGGTHMAGFRGALTRTINNYAQSSGIARKEKVSFTGDDAREGLTCVLSVKV PDPKFSSQTKDKLVSSEVRPAVEGLVNEKLAEWFEENPAEAKIVVGKIIEAAHAREAA RKARDLTRRKTAMDVNFLAGKLKDCSEKDPSKTEVFLVEGDSAGGSAQTGRDRQTQAI LPLKGKILNVERARFDRMLGSQEIGNLVMALGTGIGRDEFNIDKLRYHKIVIMTDADV DGAHIRTLLLTFFYRQMPQLIEQGHLYIAQPPLYKVSRGKSEVYLKDEAAMEEYLIQQ GIDGAMLRQGNNEEISGADLARVVELARQMRRVLDAFPTHYPRHILEQAAIAGAFTPG AVDADLQGVADKVAARLNLIALEYERGWQGRITQDHGIRLARILRGVEEVRTLDGRIL RGGEASRSGSFTEHLQEVYNLPATLVRKDRTQLIHGPMDLLNAILQEGEKGLSLQRYK GLGEMNPDQLWETTLDPDARTLLQVKVDDMAEADDLFTKLMGDVVEPRREFIQQNALS VENLDF" gene complement(211946..212263) /locus_tag="RD1_0213" /db_xref="GeneID:4198163" CDS complement(211946..212263) /locus_tag="RD1_0213" /codon_start=1 /transl_table=11 /product="thioredoxin, putative" /protein_id="YP_680628.1" /db_xref="GI:110677621" /db_xref="GeneID:4198163" /translation="MEKHLKAGDTVFLDFKASWCSTCAAQERVINALKAENPEYEAKI TFIDVDWDDHGKSDLVKRMNIPRRSTLVVLKGDQELGRIVAQTGKSQIKALMDSALGA ASA" gene complement(212378..213091) /gene="ccdA" /locus_tag="RD1_0214" /db_xref="GeneID:4198164" CDS complement(212378..213091) /gene="ccdA" /locus_tag="RD1_0214" /codon_start=1 /transl_table=11 /product="cytochrome c biogenesis protein, putative" /protein_id="YP_680629.1" /db_xref="GI:110677622" /db_xref="GeneID:4198164" /translation="MELLFAYGAGLLTLINPCVVPVLPIVIASAFQSSRFGPVALSGG LSLSFVTLGVGVTAFGQALGVDIDTISKIGAGLMVLFGLALLVPQAGAVMAGATAGLS SQADARIDTLDRGGLRGQFLGGLLLGAVWSPCIGPTLGGAISLASQGEGLLRATTIMV FFAAGVSTLILGLAYGTRGAVGRYNTQLRALALRSRPILGVAFVAVGLGLLFNLHHMI EAWMIGVLPAWLIDLSVSL" gene 213264..214499 /locus_tag="RD1_0215" /db_xref="GeneID:4198165" CDS 213264..214499 /locus_tag="RD1_0215" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680630.1" /db_xref="GI:110677623" /db_xref="GeneID:4198165" /translation="MARLSLEQKLAILSDAAKYDASCASSGSTKRDSRGGKSLGSNEG SGICHAYAPDGRCISLLKILMTNFCIYDCTYCINRASSNVARARFSVDEVVKLTIEFY RRNYIEGLFLSSGIIRSPDATMSDMVQIARKLRKEENFRGYIHLKTIPDAAPELIEEA GLLADRLSINVEMPTDAAVKQHAPEKSPEQIRRAMADVRLRKEVAKDRTHTGRRPPRF APAGQSTQMIIGADDATDSTVLGQSTRLYSSYKLKRVYYSAFSPIPDASAKLPLISPP LQREHRLYQADWLLRFYGFDLEEITGHRKDGNLDLDIDPKLAWALAHRGLFPLDVNTA SRDMLLRVPGFGTKTVGRILSTRRHRTLRYEDLARMGASMKKAQPFITALGWTPRNLT DSDTLRARFAPPPQQMSLF" gene 214501..215940 /locus_tag="RD1_0216" /db_xref="GeneID:4198166" CDS 214501..215940 /locus_tag="RD1_0216" /EC_number="3.2.2.-" /codon_start=1 /transl_table=11 /product="uracil-DNA glycosylase, putative" /protein_id="YP_680631.1" /db_xref="GI:110677624" /db_xref="GeneID:4198166" /translation="MPHVSLPRIGTAEAWRDAARGFLSAAVPPAQITWGDSTTEPGLF ETPAPLVAPGRVTVPRSFVSMANTVVWHSDPSRFARLYAFLWRLKDAPHLMTDRGDAQ LAKLRSMEKNVRRCQHKMKAFVRFREIGAPGDNRRSFAAWFEPTHHTIEPTAQFFVRR FADMDWRILTPDVSVFFENGALRFLEDHPKPDLPEDASETLWVTYFRNIFNPARLKVQ AMQSEMPKKYWKNMPEAAAIPDLIASAPERARQMALAAPTLPPTRISAIQAQQAAHES VWDGPPGSLPKAIAGCTRCPLHKTATQAVPGEGPLDARLMIVGEQPGDQEDLIGRPFV GPAGQLFDSIAADAGLDRGKVFITNAVKHFKFTPRGRKRIHQRPNQGEVAHCKWWLDA ELREVAPDLVVAMGATAAAALTGSGKAISARRGRIETGEAGIPVLITWHPSYLLRLRD DTQRMAATQELACDLRMALEYKGKALAAR" gene complement(215980..216975) /gene="idhA" /locus_tag="RD1_0217" /db_xref="GeneID:4198167" CDS complement(215980..216975) /gene="idhA" /locus_tag="RD1_0217" /EC_number="1.1.1.18" /codon_start=1 /transl_table=11 /product="myo-inositol dehydrogenase" /protein_id="YP_680632.1" /db_xref="GI:110677625" /db_xref="GeneID:4198167" /translation="MISIGLLGCGRIGQVHAGSIARMGNARLTAVADAVPEAAQKLAE TSGAQTRTAEDIIAATDIDAVIVATPTSLHYDQIHALAAAGKAIFCEKPIDLSSDRAA ECMAAVTKAGVPFMTAFNRRFDPHFAHLQAQVADGVIGDAELLVITSRDPAPPPLSYI RQSGGLFRDMMIHDFDMARFILGEDPVDIYAAGACLVDPGIATAGDIDSAMVTLKTAS GKLCQINNSRRATYGYDQRLEVHGSKGMLQVSNQVENLVTHAATAGFASAPNQHFFLE RYQAAYLAELRSFVDALTKGAAPQPSVADGVAAQRMADAAAESLATGKPVKLAMS" gene complement(216979..217827) /gene="fba" /locus_tag="RD1_0218" /db_xref="GeneID:4198168" CDS complement(216979..217827) /gene="fba" /locus_tag="RD1_0218" /EC_number="4.1.2.13" /codon_start=1 /transl_table=11 /product="fructose-bisphosphate aldolase, putative" /protein_id="YP_680633.1" /db_xref="GI:110677626" /db_xref="GeneID:4198168" /translation="MTLATLTDVLRPALRDGYAVGGLVTLGWEDMRAYVRAAEAEGLP VILQAGPSCRKHTPLPVLGKMFRHLADSVSVPVVAHLDHGYTFDECREALDSGFTSLM FDGSRLGLSENIDQTARIAEMAHAAGISCEGEIGFVGYAEGENSQGTDPAEAVKFAKD SGVDAMAISVGNVHLQQNQEGGLDEARIRAIEAVTDVPLVIHGGSGVPPEQRSALARN SSICKFNIGTELRMVFGQALRAAVAVDPDRFDRVQILSDVEAPIEAAARTALRAIGPA QDTNKG" gene complement(217824..218666) /locus_tag="RD1_0219" /db_xref="GeneID:4198169" CDS complement(217824..218666) /locus_tag="RD1_0219" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680634.1" /db_xref="GI:110677627" /db_xref="GeneID:4198169" /translation="MHIAPFDNQNKPIVDAGDSLVPLNYFNIVKLKKGESFGYAVPGY ETCIAPATGLLDVATGGFEAKNLGGRGVDVWDGEPEGVYVPSGQEARFTCLSDSAEVF VAGAKFDEVLEPFAVRADEIDLVQYGSDDTKTHRKIKHILGANQHERVGRLLVSELFT VGAGGWSGFPSHKHDTDRLPDETRHDETYNFRFKPNYGSGLQMLQREDNEPGDAYHIV DGSTICIDKGYHPCCVLPGYEMYYFTILGGLSQRSLKQYFQPTHAEQLHTIPGIMDMV AKFK" gene complement(218671..219645) /locus_tag="RD1_0220" /db_xref="GeneID:4198170" CDS complement(218671..219645) /locus_tag="RD1_0220" /codon_start=1 /transl_table=11 /product="pfkB family kinase, putative" /protein_id="YP_680635.1" /db_xref="GI:110677628" /db_xref="GeneID:4198170" /translation="MREGIAQKNFVILGRAGMDMFAHPPGVKSEEAEVFHADLGGSSA NIAAGLCKLGCAASLVTSVSDDAVGRFCINRMKHYGVGTEYVRSVAGEFRNSLAIYES CIEDFQNVIYRNGAADFQVTTDDMAAVDFSPFGALVTAGTVFAAEPSRSATFAAFETA RARKLPVIFDIDYRPYSWPSPEVAADVLSRAGAASDMIVGNDEEFGFMAGDIAKGLEK AQSLAENGVAIVIYKMGEKGAVTFAGGQEIHTGIYPVTAVKPNGAGDSFMAGLLSGIA EGLDLQDAVLRGSACASIVVAKPGCAPAMPTHDQLAAFLAEHPGPTKG" gene complement(219669..221534) /gene="iolD" /locus_tag="RD1_0221" /db_xref="GeneID:4198171" CDS complement(219669..221534) /gene="iolD" /locus_tag="RD1_0221" /codon_start=1 /transl_table=11 /product="acetolactate synthase" /protein_id="YP_680636.1" /db_xref="GI:110677629" /db_xref="GeneID:4198171" /translation="MTDKTIRLTTAQAIIRYLNAQFIEIDGERVRLCGGGFGIFGHGN VTCLGEALFDVKDTLPLYRGQNEQGMGFAAAAYAKYHLRQRFMFCTASAGPGTSNLMT AAALAHTNRLPMLMLCGDTFLTRLPDPVLQQIEHYGNPAYGLNDGFRAVSRYWDRITH PAQVIQSLPAAIATMLDPADCGPAFIALPQDVQGWAYDYPEALFEEKTHRIRRQTPDP DEIADAAALLRAAERPVIIAGGGVQYSRAVAELTAFAEAHDIPVIETIAGRANLHDTH PLNIGPVGVTGSDSANAVAEAADVILSVGSRLQDFTTGSWTAFAKDARIVSLNAARHD AGKHMSLPVVGDAKLGIAALGTALAGYRAPESWTGFAKEERQKWNAYVAENVKPGNRP NSYAQAVGVVNALCDKRDRVVAAAGGLPAEVTANWRTLDIGTVDVEFGFSCMGYEISG GWGARIAQSEKEPDQDTIVFCGDGSYLLMNSDIYSSVLTQKKMILLVLDNGGFAVINK LQNNTGNQSFNNLFEDTPTIPEAFAVDFVAHAASMGAHAMRADNAAELGAAFKAAKAA DKTTVIVMNVDAYDGWTTQGHTWWEVGTPEVSDHQSVREKHAEIEASRAKQRRGV" gene 221652..222755 /locus_tag="RD1_0222" /db_xref="GeneID:4198172" CDS 221652..222755 /locus_tag="RD1_0222" /EC_number="1.1.1.-" /codon_start=1 /transl_table=11 /product="oxidoreductase, putative" /protein_id="YP_680637.1" /db_xref="GI:110677630" /db_xref="GeneID:4198172" /translation="MAEIGIGIIGGGYMGKAHAVAFSAVGAVFDTTLRPRLEMVAAST ESSAASYAKSYGFARSTGDWRVLVADADVQAIVIASPPETHLEITRAAAALGKPVFCE KPLGRSVEDGKEMVQAVEAARAVNMIGFNYIRTPASQYARALIAEGEIGDITWFRGEH TEDFYADPDAPATWRAQGDSNGCMGDLAPHMINAALALIGPIGSVMAEIETVHKTRGG APVTNDDQGQIMCRFTNGAMGHLFFSRTATGRKMGYIYEVTGTRGAIRFDQEDQNALW LYKAEGPEAQRGFRKILTGPAHPDYEPFCQGPGHGTGYQDQIIIEARDFLAAIEAGKS RWPTFRDGLEVSNIVEAARRSHAARAWQDVNHG" gene 222774..223670 /locus_tag="RD1_0223" /db_xref="GeneID:4198173" CDS 222774..223670 /locus_tag="RD1_0223" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680638.1" /db_xref="GI:110677631" /db_xref="GeneID:4198173" /translation="MTIKIGNAPCSWGVEFADDPRNPAWRDVLRENAEAGYKGIELGP VGYVPEDPAILADALAEYDLSLIGGVVFRPFHDPAAWDDVLDAAVRTCKALKAHGAEH LVLIDSTSPRRAGTAGRANDAEQMDKAEWSAFRDRIAAVARIGAEDYGLTVGMHAHAA GFLDFEPELERLMNEIDENTLKICFDTGHHSYAGFDPVAFMEKHIGRISYMHFKDIDP VVKADVIAKSTGFYDACGQGIFCNLGDGDVDFPRVREILLESGFDGWCTVEQDCDPTL PDTDSLRDAKLNRAYLETIGFS" gene 223684..224817 /locus_tag="RD1_0224" /db_xref="GeneID:4198174" CDS 223684..224817 /locus_tag="RD1_0224" /codon_start=1 /transl_table=11 /product="oxidoreductase, putative" /protein_id="YP_680639.1" /db_xref="GI:110677632" /db_xref="GeneID:4198174" /translation="MTRLNWGMIGGGEGSQIGPAHRLGAQADGNFVLAAGALDVDAEK GKAYAQSLGVSAQRSYANWQDMLEGEKNHPDRLDLITVATPNSTHFEITKAFLEAGFN VLCEKPMTMTVDQGEEIVRVAKASGKICAVNYCYSAYPMVRQMRQMVAAGEIGKVRLI VTNFSHGHHGDATDADNPRVRWRYDPAMAGVSGQFADCGIHALHMASFIAGDEVRSLS ADFASTIDSRVLEDDAMVNFRMEGGTVGRLWSSSVAIGRQHGFDIQVFGETGGMRWAS EQPNQVFYTPVGGRTQIMEKGEAGLSDEAARLSRVAIAHPEGFPLAVANIYVDLAAAI RGQRRDSLPTAEDGLRSMAAVYAAVDSAVQDGKWVDARPPSLR" gene 224950..225585 /locus_tag="RD1_0225" /db_xref="GeneID:4198175" CDS 224950..225585 /locus_tag="RD1_0225" /codon_start=1 /transl_table=11 /product="putative cyclic nucleotide-binding domain" /protein_id="YP_680640.1" /db_xref="GI:110677633" /db_xref="GeneID:4198175" /translation="MDHFANLHWIEAVGWLASILTVASYSVATMLPLRLLAIASSVCF AAYAFTLQLWPLLAMELILLPINIYRLWQVLALRGKLSRATVSTESDFSIIKAYGKRK TIKAGEVVFQRGDPVDQLYFIAKGRVSIEEMQVDLCAGDIFGEIAFFTNTATRIATAR CTEDTQVYSIDEKHFMRLQFEDPSFGIAVMRIITHRLIENVGKTVEPAPGA" gene 225804..226409 /gene="leuD" /locus_tag="RD1_0226" /db_xref="GeneID:4198176" CDS 225804..226409 /gene="leuD" /locus_tag="RD1_0226" /EC_number="4.2.1.33" /note="catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D" /codon_start=1 /transl_table=11 /product="isopropylmalate isomerase small subunit" /protein_id="YP_680641.1" /db_xref="GI:110677634" /db_xref="GeneID:4198176" /translation="MDKFTTLTGIAAPLPLINVDTDMIIPKQFLKTIKRSGLGVNLFD EMRYDDDGNEIPDFVLNQDAYRKAEIIVAGDNFGCGSSREHAPWAIKDFGIRCVIAPS FADIFYNNCFKNGILPIALPQEQVDVLMKDAEKGANARMTVDLETQTVTTSDGEVFSF DLDPFKKRCLMEGLDDIGLTMEKISAIDSFEQSAAQARPWV" gene 226454..227707 /locus_tag="RD1_0227" /db_xref="GeneID:4198177" CDS 226454..227707 /locus_tag="RD1_0227" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680642.1" /db_xref="GI:110677635" /db_xref="GeneID:4198177" /translation="MAFMVNDMMFLRHAARLRSGWFQKTRDLPDAYPESRGISKRALS KQENPHLGRARRRSRVRIAVSARSLLLTAAISLNAACAWSETLRVATFNTGLERKGPA LLLRDIVRGEDAQIEAVASVLTTIAPDIVALQSFDYDLTGAALSAFSKVLRDVGLDYP YQFAALPNTGMRTDLDMDGNRRRAEARDAQGYGFFSGQGGMAILSKYPIVTDEVQDFS SMLWRDFPGALLPQTAAGPFPSEQAQAIQRLSTTGHWVVPVDVPGLGRVTLMTLHASP PVFDGPEDRNGKRNHDEIVFWQRYLDGSFGPAPDRQFVLLGDFNQDPVDGEGLKNAIR SLISDPRLQDVEPTSTGSAEATGDPFDTADWDDPVPGNMRVDYVFPSSDWRVQEAGVY WPSGPAGVVAQTASRHRLVWVDLAR" gene 227780..228886 /gene="leuB" /locus_tag="RD1_0228" /db_xref="GeneID:4195057" CDS 227780..228886 /gene="leuB" /locus_tag="RD1_0228" /EC_number="1.1.1.85" /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="YP_680643.1" /db_xref="GI:110677636" /db_xref="GeneID:4195057" /translation="MANPSLLILPGDGIGPEVMEQVKRVIAWFGDKRDLAFDVSEDLV GGAAYDAHGTPLHDETMARALQVDAVLLGAVGGPKYDDLDFSVKPERGLLRLRKEMDL FSNLRPAQCFDALADFSSLKKDVVAGLDIMIVRELTSGVYFGEPRGIFEEGNERVGVN TQRYTESEIDRVARSAFELARRRNNKVCSMEKANVMESGILWREVVQKVHDEDYPDVE LSHMYADNGAMQLVRAPKQFDVILTDNLFGDILSDCAAMLTGSLGMLPSASLGAPAAN GRPKALYEPVHGSAPDITGQGKANPIACILSFAMALRYSFDQGDEAARLEAAIETVLA NGARTADLMGEEGGTPISTTEMGDAILKALDASL" gene 228998..230002 /locus_tag="RD1_0229" /db_xref="GeneID:4195058" CDS 228998..230002 /locus_tag="RD1_0229" /codon_start=1 /transl_table=11 /product="integral membrane protein, putative" /protein_id="YP_680644.1" /db_xref="GI:110677637" /db_xref="GeneID:4195058" /translation="MARGPMNPNVKGASFALIAFAVFALHDVIIKVLGSSYSPIQIVF FGVVFSFPLAMLYLLRDTTSGTLLPVHPWWMAARTVAAVITGFCAFYAFSVLPLAQVY AILFAAPLLITILAIPILGEQVRWQRWLAVFIGLCGVLIVLRPGQQELALGHLAALVS AICGSFASIIVRKIGREERTVVIMLYPMMANFVVMAALLPLVYQPMPLADLGKLGVIA VLAWVAGRFLIAAYNSGEAVIVAPMQYSQILWATFYGVLFFDEVPDLPTIAGSAVIIA SGLFIVLRESSAPGSERPVQRTRSRAETGTSPRVSTFLSPDRKWGRSRKKDTSKPDDL " gene complement(230261..231901) /locus_tag="RD1_0231" /db_xref="GeneID:4195059" CDS complement(230261..231901) /locus_tag="RD1_0231" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter, periplasmic binding protein, putative" /protein_id="YP_680645.1" /db_xref="GI:110677638" /db_xref="GeneID:4195059" /translation="MKFSDTIHPAARTYSQEVAAGTLSRREFLTRATSLGVSAAAAYG LLGLSKPAKAASPALSGGTLRIESLVKALKDPRTYDWPQMSNYTRGYLEFLVEYQIDG SFEPMLLEGWEVNADATEYTLSVRQGVTWNNGDAFTAEDVAFNITRWCDKGVEGNSMA SRMDALVDPDTGVAREGAIVVEDAATVRLVLEKPDITLIAGFSDYPAAIVHQSFNGDP LDNPIGTGPYMPAEFEVGVRAALVRNEAHNWWGEGAYLDRIEYLDYGTDQASIVAAVD ADEVDMVYESLGDFIFIMDDIGLAKSEAVTANTVVIRPNQAAEVDGIKPYADARVRRA LAMAVDNAVLLELGFSDNGRLAENHHVSPIHPEYAELPAPVFDPAGAMALMEEAGMAD YEHDLISIDDTWRKDTTDAAAAMLRDAGMNVKRTVLPGSTFWNDWSKYPLSSTDWAQR PLGVQVLALAYRSGEPWNESAFANAEFDALLSDAMAIADADQRREVMAKLQKIMQDEG VIIQPYWRSIYRHHKENVVGAEMHPTFEIHVTKLGLAA" gene 232120..233331 /locus_tag="RD1_0232" /db_xref="GeneID:4195060" CDS 232120..233331 /locus_tag="RD1_0232" /codon_start=1 /transl_table=11 /product="HAMP domain protein, putative" /protein_id="YP_680646.1" /db_xref="GI:110677639" /db_xref="GeneID:4195060" /translation="MIDQNNPSIGRFDKSFLVHMIRDFFIVLVIVTVVEFSLKAALVF YSYYVDGVEQAQLVAEDLADNVRSIMRNEGGPVAARTMYPILEENWSDLGYVIAIEPA PVTVESIEEGFGFTPKGIPAENWPDGRFQVHQIDITAETFCLACHTQASVGDVLGTVT VRNYLYRDFSIWFKDVRLTAILSAGKIVLHSLLLFLILRARLEPLMELRSVISNLARA YGRLDHRAEIRTSDEFGVLARDLNLFLDRITGIVSELDLVLAKVVRANDDIISVQGSL RETVDDVVSGIRRLERDAMLSAKREPRLSNEWFDAVKGSINALDAALDGAQDATAATD LLNALRQVVANAEGQTETSEKIYKNLADLGDQSETLKSSTLEMTRLEERLKSIIETCG GLVRRLKPEGK" gene 233441..233517 /locus_tag="RD1_0233" /db_xref="GeneID:4195061" tRNA 233441..233517 /locus_tag="RD1_0233" /product="tRNA-Arg" /db_xref="GeneID:4195061" gene 233606..234763 /locus_tag="RD1_0234" /db_xref="GeneID:4195062" CDS 233606..234763 /locus_tag="RD1_0234" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LacI family, putative" /protein_id="YP_680647.1" /db_xref="GI:110677640" /db_xref="GeneID:4195062" /translation="MPARRFTVLLAHELAWFRQCLIGRPFVGYQCATGQELAVTRPKH RPLTLRDVSEACGVSEMTVSRVLRNRGDVSAATREKVLAAAKALGYVPNQIAGSLASQ RVNLVAVVIPSLSNMVFPEVLTGINRTLDDTPLQPVVGVTDYLPEKEEQVLYEMLSWR PSGVIIAGLEHSDATRAMLTNAGIPVVEIMDTDGTPVDSMVGISHRRAGRKMAEAILK QGFSRIGFLGTKMPLDHRARKRFEGFTEGLTKAGIEIEDREFYNGGSALAKGREMTQT MLERSPDLDFLYYSNDMIGAGGMLWLMDQGVDIPGEVGLAGFNGVELLEGLPRQLATM DACRAEIGEKAAQIILDRSAALDTEDSFEPEHITLAPKISYGQTLRRHGQG" gene 234760..235971 /locus_tag="RD1_0235" /db_xref="GeneID:4195063" CDS 234760..235971 /locus_tag="RD1_0235" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680648.1" /db_xref="GI:110677641" /db_xref="GeneID:4195063" /translation="MNTLTLSNTDARQLFLDRHALAETPAGAAQGDALLDLIRRLGFV QLDSINTVARAHDLILFARRPRYRPEALKSLYETDHALFEHWTHDAAVIPMEFYSWWQ LRRQRDAEKLRKQWKNGRRGGFEAQFQTILDQIREQGPVSSSDVGAGEKRGSGGWWDW HPSKTALEYLWRSGALCVVGRDGFRKRYDLTERVVDAALRDAPLSQDRQKATIDWCCT GALDRLGFATPTELAAFWDHITLAEAKEWCAAQLAKGCLQPVQITCADGGARHSFARP DLAADPALERRASKRLRVLSPFDPALRDRKRAERLFGFTYRIEVFVPEAKRTYGYYVF PILQGDKIIARVDMKAFRNEDVLRVKALWPEPGLRWGKGRQSAFEGELTRLTRLAGVS KVGFEDGWLRA" gene complement(236071..236796) /locus_tag="RD1_0236" /db_xref="GeneID:4195064" CDS complement(236071..236796) /locus_tag="RD1_0236" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680649.1" /db_xref="GI:110677642" /db_xref="GeneID:4195064" /translation="MLHGQTDTMSNKGADKLGILMLDTRFPRIPGDIGNPQTWDFPVQ YAVVPGASPQAVVCDDTAPFVRAFVREGQRLVAEGCTGIATTCGFLALIRPQLAQALG VPVAASALEQAAQIQATLAPDKNLGIITISKASLSPSHLRVAAVPEDCAIVGMEGSDF ARSILENRADLDVARARHELVAAGQTLVETAPQTGAILLECTNMVPYAADLRRATGLP VYSIYTYLNWFHQSLNPKVFPPG" gene complement(236804..237319) /locus_tag="RD1_0237" /db_xref="GeneID:4195065" CDS complement(236804..237319) /locus_tag="RD1_0237" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680650.1" /db_xref="GI:110677643" /db_xref="GeneID:4195065" /translation="MSDSFPGPVVSSAHLASGSFAEISELEFGLTLAGNAFHRWMVRA IAMAGYPELGALDVLVLHSVYHRERPKKLADICLVLNVEDTHTVNYAIKKLIKAGLVK DGRQGKEKTVVATKKGAETCERYRDIREGLLLRAVGDLGLEPEQVSRAATLLRLMSGQ YDQAARAATTY" gene 237454..238695 /locus_tag="RD1_0238" /db_xref="GeneID:4195066" CDS 237454..238695 /locus_tag="RD1_0238" /EC_number="1.4.99.1" /codon_start=1 /transl_table=11 /product="oxidoreductase, FAD-binding, putative" /protein_id="YP_680651.1" /db_xref="GI:110677644" /db_xref="GeneID:4195066" /translation="MTKNVVVIGAGIVGVSTAIWLKRAGAQVTIIDRAGPGKGTSHGN AGVLAAAAMVPVTTPGLIRKAPGMLFNPDFPLYLRWSYLPKIAPWLVKYLSNANDADT RRIARDLAPIVTDSVSQHKSLVRELGLDAWVTESDYCFAYTDEAAFKSEAYVWALRRD AGFEPELIRGGDVQDYEPNISPSVGLIAALKDHGFIRDPGGYVQALAKAFDGMGGTVI TAEVKDFDLSGGRISGLETTAGRINCDDAVLATGVWSKPLMKKLGLNIPLESERGYHI VYEDATGGPARPTMIASGKFVATPMAQGVRCAGIVELGGLHAGPSDAPLKFLRKKTKE TFPNLNATAEVEWLGHRPAPTDSLPLIGQIGKTGVFTAFGHHHIGLTGGPKTGRLVAG LVMEHPANQDLTAYAPQRFQN" gene 238716..239705 /locus_tag="RD1_0239" /db_xref="GeneID:4195067" CDS 238716..239705 /locus_tag="RD1_0239" /codon_start=1 /transl_table=11 /product="peptide ABC transporter, solute-binding protein" /protein_id="YP_680652.1" /db_xref="GI:110677645" /db_xref="GeneID:4195067" /translation="MKMKRKLMASVATVALTVTSAVPAFAAEKWDMPMAYSASNFHSE NGVAFAECVGAGTNGEITIEVHAGGSLFAGADIKRAIQTGQVQIGERLLSGHQNESAV FGFDSVPFLAPSFEDSEKLYAAAKPSIEALLDEQNLELLYAVPWPPQGLYFKKEVNSV ADMAGVKFRSYNNTTSRLAELTGMLPVTVEAAEISQAFATGVAEAMVSSGATGYDRKV WESLTHFYEVDAWLPRNYVMVNQDVWADVSDANKDAIRACATEAEARGLEASKAYTQF TMDGLAAGGMTVQPAGDALMAELRAIGETMTTEWLEAAGETGAALVDAYKAAQ" gene 239769..240293 /locus_tag="RD1_0240" /db_xref="GeneID:4195068" CDS 239769..240293 /locus_tag="RD1_0240" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680653.1" /db_xref="GI:110677646" /db_xref="GeneID:4195068" /translation="MTALRKTLDFLYHAAGVLAAICLISILLLIVAQMVARWTGEIFP GAPDYAGYAMAAASFLAFANALNHGAHIRVSIVLNALPAGPKRLLEIWCFGIGAAIAW YFTYYAYWFVYWSWKFNEVSQGQDATALWIPQSVMVIGGGLLAISLTDNLFHVIFKGD HRIVRDTVDDHFEV" gene 240274..241608 /locus_tag="RD1_0241" /db_xref="GeneID:4195069" CDS 240274..241608 /locus_tag="RD1_0241" /codon_start=1 /transl_table=11 /product="putative TRAP dicarboxylate family transporter, DctM subunit" /protein_id="YP_680654.1" /db_xref="GI:110677647" /db_xref="GeneID:4195069" /translation="MIISRCEAMTELYAIAIFLAVLFLLLGTGVWVGLALMGVAWVGM ELFTTRPVGDTMITTIWASSSSWTLTALPLFIWMGEILYRTRLSEDMFKGLSPWLARL PGGLVHTNIVSCTVFAAVSGSSAATLTTVGKMAIPELRARKYPEKMVIGTLAGAATLG LMIPPSLALIVYGVTVNESITKLFFAGVFPGLILASMFMAYVAIVSFTSKDWNPTVER GMSFGEKVRNSKFLAPVFALIAVVIGSMYLGYATATEAAAIGVIGSLLLALTQGSLTM ASFQASLMGAMRTSAMIALILAGAAFLKLSMGFTGLPRALADGIAAMELGRFQLLMAL LVFYIILGMFLDGISAVVLTMAIVEPMVREAGIDLIWFGIFVVVVVEMAQITPPIGFN LFVLQGMTRHEMGYITKAALPMFLIMVLMVFVLIWFPQIATWLPENLRQNAS" gene 241608..242537 /locus_tag="RD1_0242" /db_xref="GeneID:4195070" CDS 241608..242537 /locus_tag="RD1_0242" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680655.1" /db_xref="GI:110677648" /db_xref="GeneID:4195070" /translation="MLKVLLWRISENGRLALIVGLVAGLTLPGLAAALQPWLPQMVAV LLAITALRIGHRAASGALADLRWGIGSVVVLQLLLPFCLFALCWSLGLAGTPIALAAV LATAAPAISGAPNLALMLGQNGGRMMQILVLGTALFPITVLPLLWMTPQLGDPHQVLR AALSLLGVIIAATSLGFGLRAIVFPNPTEAQVKALDGLSVLAFSAIVVGLMAALNPAL RNNAPEVAMWALLAFAISYGAQIVVYLFLRRSRLGPVAGPLAIGAGNRNIALFLVALP EQVMAPLMVFIGCWQLPMYMTPILLRWLYKPEG" gene 242542..243276 /locus_tag="RD1_0243" /db_xref="GeneID:4195071" CDS 242542..243276 /locus_tag="RD1_0243" /codon_start=1 /transl_table=11 /product="allophanate hydrolase subunit 1, putative" /protein_id="YP_680656.1" /db_xref="GI:110677649" /db_xref="GeneID:4195071" /translation="MSYPQIKTVGLSGLLVTFAEKMSSPANRAALAFRAAVVAADWPE VRETSMSLVSVYVVADLVSEDIPKLITKLENLLSQTDWYAAPLPEGRRLWHVPTVYGT DLAPQLEEAAELAGVDPDTAIQQLSTTRMRVLTIGFAPGQPYMGELGENWNIPRQQDL TKSVPAGALVAAIRQLVVFTAPTPTGWRHVGQTAFENFRQTADQPFALTPGDELLFPQ VSRQALMDIMKSDTSGNGGAERETLP" gene 243273..244295 /locus_tag="RD1_0244" /db_xref="GeneID:4195072" CDS 243273..244295 /locus_tag="RD1_0244" /codon_start=1 /transl_table=11 /product="allophanate hydrolase subunit 2, putative" /protein_id="YP_680657.1" /db_xref="GI:110677650" /db_xref="GeneID:4195072" /translation="MSGHLTIHAAGPGSSVQDMGRAGFLAYGLTRGGAADQMALHEAA ALLGQSATLGAIEMVGVGGTFESDVDTVIALTGAEMSASIDGSALVWHASHALPKGAK LKIGGALKGTYGYLSVAGGIEAPQIMGARSTHFKAGIGGALEAGQSLPIGVTPTQRAG FVIHASGRFAGGDIRIVPSVQTDQFSPETLARFTQTTFRRDARGNRQGVRMDADTDGF FVDGGLSIVSEVITEGDIQITGDGAPYVLMCECQTTGGYPRIGTVLPCDLARVAQAPV GAPLRFRFVTMDEAREIELKARAEIKALAGRAQPLVRNPHEMSDLLSYQLIGGAISAT TDPFAD" gene 244308..245078 /locus_tag="RD1_0245" /db_xref="GeneID:4195073" CDS 244308..245078 /locus_tag="RD1_0245" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680658.1" /db_xref="GI:110677651" /db_xref="GeneID:4195073" /translation="MNRVDLNADMGESFGPWKMGDDATLLKTVTSANIACGAHAGDPD VMVATMRTAHANGVGIGTHPGFADLQGFGRRRMSVPRASLQNSIRYQVAASVGVAKSI GARVRHLKLHGALANMASEDDTLARDLFEAALSVDPDLIVMVLCATAQEEAVRALGCS YAGEIFADRAYNDDATLVDRSLPGAVIHDPQIAGPRMVEMVQAGAIITESGKRIKTSI DTICLHGDTPTAVEIARSVRTALEGADIAVRQFDGRRH" gene 245288..245749 /gene="iorA" /locus_tag="RD1_0246" /db_xref="GeneID:4195074" CDS 245288..245749 /gene="iorA" /locus_tag="RD1_0246" /EC_number="1.3.99.16" /codon_start=1 /transl_table=11 /product="isoquinoline 1-oxidoreductase, alpha subunit" /protein_id="YP_680659.1" /db_xref="GI:110677652" /db_xref="GeneID:4195074" /translation="MPTTFNVNGNPVTLDVDPDMPLLWALRDHLKLTGTKYGCGIAQC GSCTVMLDGFAARSCVTTVGDVAGSQVQTIEGVESAAARAVQQAWTTLNVAQCGYCQS GQVLVATELLENTPKPTDEEIDAAMGANICRCATYARIRKGVRAASDSLEA" gene 245753..247936 /gene="iorB" /locus_tag="RD1_0247" /db_xref="GeneID:4197831" CDS 245753..247936 /gene="iorB" /locus_tag="RD1_0247" /EC_number="1.3.99.16" /codon_start=1 /transl_table=11 /product="isoquinoline 1-oxidoreductase, beta subunit" /protein_id="YP_680660.1" /db_xref="GI:110677653" /db_xref="GeneID:4197831" /translation="MHAIKPAHSKSNADATGPSRRAFLAGATGLVVAMALPIKGRAQA VATAQAAFAPNAFIRVSPDNIVTVLIKHVEMGQGANTGLAILAAEEMDADWSQIRAEQ APDDPSLYANLAFGVQGTGGSTGLSNSYMTMREAGATARALLIEAAAQTWGIPAGDVS VSAGVVSNDATGQTATFGELAERAATLPMPQDVTLKDPSEFKLIGAEGITRLDAADKA RGKSTFSIDVMRDGMQVVTVLHPPKFGAVLASFDATAALDVPGVTAVHQIASGVAVYG ADTFAALRGRDALVVQWDETNAETRSSQEIEEEFLKAARSPARVAENIGDVDAAFDQA ERSFEAEYIFPYLAHAAMEPLDGVVEWTPDRVDVWSAIQIPTIAAPVFSSTLGVAPEA VSLHTMYAGGSFGHRATATNHFENEMAQVAAAAGPGSYKLQWTREDDMTQGYYRPLTV HRFRGGLDADGNITGWDNTVANQSIMAGTMFEQALMGDGLDRTSYEGSTDLPYALPAR RVSWAQMQTGVPVLWWRAVGHTHTAYATETFLDELLIAGGRDPVQGRLDLITQDRPRD RAVLERVAEMAQWSGPGTGERRYGVALHRSFGSFVAQIAEVENRDGTPHVTRVWCALD CGVAVTPDVVRAQMEGGIGFGLSAALFEQLTLEAGGTVRERNFDAYRVLGLEEMPEIM VDIMPSEVAPTGVGEPGTPPIAAAVGNAWRAHTGQTPRRLPIIGA" gene 248152..249030 /gene="araC" /locus_tag="RD1_0248" /db_xref="GeneID:4197832" CDS 248152..249030 /gene="araC" /locus_tag="RD1_0248" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family, putative" /protein_id="YP_680661.1" /db_xref="GI:110677654" /db_xref="GeneID:4197832" /translation="MPRRYADIYPSSPLLNSDAMQHVSAAALMSVRYFQAEPDSMPEE VFAEHHVLLNLCETPHRVQNRRDGELRDFMFHKDEIIVTPAGMKSGWRWFGKSDVIVV TLDPAKVQKFAQSELGIILDRQQFADLPQFNDPDLCAAGIMLRDALENDDLTSGVMFE AMSRVLLVKLLQRYGQKRPEELALSARFTTDHYGQVLAFIRANLDRTITVDDLAAEVG MSPSHFGRVFKETLGQTPMQYVLAYRIEQAIEMMKEAGRPLGMIALDCGFADQAHFSR SFKQVMGQTPRQYRAR" gene 249157..250302 /locus_tag="RD1_0249" /db_xref="GeneID:4197833" CDS 249157..250302 /locus_tag="RD1_0249" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family, putative" /protein_id="YP_680662.1" /db_xref="GI:110677655" /db_xref="GeneID:4197833" /translation="MRSLTLPPSQGGAGRFDSACCTWLKVFVALTFDDSDCLEMTIDK LPHLSTVSSQFIADWLAALRPLCSADHFTDLLQRSDLQSGEDVQNGRVTLDQIVCLYQ LAAVETGDEMMGLWSRPIRHRALQHLLTSVREATSLSSALYRFSTFWNLLLDDYEFTF SEDETGSVLRLTPRGDHEPQRFGHMLILKLAHGLISWLARDEVPVTAVDFAFARPRFD EDYAVIFPAPVRFDQSATAITFDLSLQGPVQLRSTADLDVFLQNAPRDWIFTRSEVHT QSLRVRSYLSQAGWDTANLTGAARALHLTPRTLIRKLEADGTSFQMIKDALRRDIAIR HLQTGQHSIEAIAHEVGFSSAANFHKAFQRWTGNTPSSYRRRNAGKR" gene 250459..251688 /locus_tag="RD1_0250" /db_xref="GeneID:4197834" CDS 250459..251688 /locus_tag="RD1_0250" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase, putative" /protein_id="YP_680663.1" /db_xref="GI:110677656" /db_xref="GeneID:4197834" /translation="MLERRTEHMSDKLESILAAAHDHATQVVTPNVDAWNAAKAWPRD ASDKAGAAGLMGLYAPEAWGGEGLPLSEGIQVYEQLGLGDGAYAFALSMHNICTFAGC GYGTDAFKEKWAHDLTSGRKLANFALTEPQSGSDPVKMYTRATINDDGTWTISGSKAW VSLAAEADIYFTVVKTSDAPGHKDMAMIAIPADAPGISFGKPYETPSYNYLPMSEMYL DKVVVSADNIILPIGQGLQGSLMAIDIARVSIASGCCGLMQAALDTALAYSKNRKMFG GKNLDLDGIQWMLGEVATDLEVSRLLYRKAAQALGTPEGPLMAAHAKRFVPDAAVKAT NTCTQVLGGMGLLQPYGLDRLSRLAQMLRIVDGTTEISRVVIGRALQKRAAGLPDLPV PKGFGEEAADAVPVAAE" gene complement(252232..253581) /gene="fliI" /locus_tag="RD1_0251" /db_xref="GeneID:4197835" CDS complement(252232..253581) /gene="fliI" /locus_tag="RD1_0251" /EC_number="3.6.3.14" /codon_start=1 /transl_table=11 /product="flagellum-specific ATP synthase" /protein_id="YP_680664.1" /db_xref="GI:110677657" /db_xref="GeneID:4197835" /translation="MNQPIPFDGLTAQITELNPVRSIGRVCRVEAGVIHISGLAGKAR IGDLVVVYRQGEPLSGEILQLDGDTLVILPDQDAEGVALNDRAALLEARGIAPSQGWI GRIIDPFGNPIDGKPLLRGAEARSLRSAPPEPALRRPMGTRLNTGMSVLNTMLPVVKG QRVGLFAGSGVGKSSLLGHLAQNMTADVVVVALIGERGRELRHFVEEVLGPEGLKRSV VICATSDQSPLIRRRCAWAAMSVAEHFRDMGLSALILADSITRFAEAHREVAVASGEA PVLRGYPPSTAHLIMSLCERAGPGEGAQGDITGIFSVLVAGSDMEEPIADILRGVLDG HIVLNREIAERGRYPAIDVLKSISRSLPAAADDIENELISIVRRYLSIYEQNEMMIRA GLYSQGSDPDIDAAIQVWSDLDAFFAKPEKQDVSNSFSQLELLLRRNKIQTRPTMVQ" gene 253663..254061 /gene="flgB" /locus_tag="RD1_0253" /db_xref="GeneID:4197836" CDS 253663..254061 /gene="flgB" /locus_tag="RD1_0253" /note="with FlgF and C makes up the proximal portion of the flagellar basal body rod" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgB" /protein_id="YP_680665.1" /db_xref="GI:110677658" /db_xref="GeneID:4197836" /translation="MFEKLEVFRMAHAMAVHAGEKQAVTAQNVANSDTPDYQARDVIP FSDTYSRDPANGGWGSQKATRQTHINGAAAGQTPDPIIDENGVGSPNGNTVSLENEML KSLDAKRQHDRALAIYKSSLSILRATLSRS" gene 254075..254464 /gene="flgC" /locus_tag="RD1_0254" /db_xref="GeneID:4197837" CDS 254075..254464 /gene="flgC" /locus_tag="RD1_0254" /note="with FlgF and B makes up the proximal portion of the flagellar basal body rod" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgC" /protein_id="YP_680666.1" /db_xref="GI:110677659" /db_xref="GeneID:4197837" /translation="MSEFSKSLDVTTSGLKAQATRLRHLSENISNADTPGYRRKLVSF ETAFGGQGVSTVETSRVRLDQSTLERVYDPSHPMADESGYFDGSNVDLLIELSDAREA QRSYEANLKVFEQTRKMSSSLMELLRK" gene 254518..254844 /gene="fliE" /locus_tag="RD1_0255" /db_xref="GeneID:4197838" CDS 254518..254844 /gene="fliE" /locus_tag="RD1_0255" /note="forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella" /codon_start=1 /transl_table=11 /product="flagellar hook-basal body protein FliE" /protein_id="YP_680667.1" /db_xref="GI:110677660" /db_xref="GeneID:4197838" /translation="MDMKAVSAIQNFTNARAASAIESYQQARPATEPLPEESSASETL GRVAKDFASTLAESEEIAKSSMVGDADPHALVQALAQTELAVEAAVRVRNKVVEAYQE ILRMPV" gene 254846..255115 /gene="fliQ" /locus_tag="RD1_0256" /db_xref="GeneID:4197839" CDS 254846..255115 /gene="fliQ" /locus_tag="RD1_0256" /codon_start=1 /transl_table=11 /product="flagellar biosynthetic protein FliQ" /protein_id="YP_680668.1" /db_xref="GI:110677661" /db_xref="GeneID:4197839" /translation="MADQIIFFDTLRHGLWIAVLISIPVLTAALVTGVSIGLVQALTS IQEMTLTFVPKLAAIVLVFWMSMGFMTQTLVSFFHEQIIPLIVGG" gene 255118..255831 /gene="flgF" /locus_tag="RD1_0257" /db_xref="GeneID:4197840" CDS 255118..255831 /gene="flgF" /locus_tag="RD1_0257" /note="FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Rhodobacter sphaeroides has 2 copies of this and other flagella genes" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgF" /protein_id="YP_680669.1" /db_xref="GI:110677662" /db_xref="GeneID:4197840" /translation="MENSGYTTITRQSGLMKEMRVVANNIANAATSGFRQEGVIFSEY VKSVDGASSLSMGQADARQTSFAQGALTQTGGQFDFAIEGDGFFLVETPLGERLTRAG AFSPNADGDLVTPDGYRVLDAGGAPVFIPPGAADIAVSADGTISTNGDPVGQLGLVQP RNPQGLVREDGVMFRADEGYEAAEQGRILQSFVENSNVNPILQLTRMIEVQRAYELGA SFVEAEDERVRQAMRTMSQ" gene 255861..256646 /gene="flgG" /locus_tag="RD1_0258" /db_xref="GeneID:4197841" CDS 255861..256646 /gene="flgG" /locus_tag="RD1_0258" /note="makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella" /codon_start=1 /transl_table=11 /product="flagellar basal body rod protein FlgG" /protein_id="YP_680670.1" /db_xref="GI:110677663" /db_xref="GeneID:4197841" /translation="MRALKIAATGMSAQQMRVETISNNLSNMSTTGYNARRAEFADLH YQQMSRPGTVNATDGTVLPTGVQLGLGVRPSAVSVQLQQGSLSATGGDLDLAIEGTGF LEVTLPSGQTAYTRDGGLKRDAEGLIVTSDGYPVEPEIVIPDDARSISINTSGEVFAY FSDATDAELLGQFNLAGFTNAKGLEALGGNLFAETEASGAAIVSTPGEDGLGTVRQGY LESSSVDAVREITELIEAQRGYEMNAKVISAADQMMGATTQIR" gene 256643..257065 /gene="flgA" /locus_tag="RD1_0259" /db_xref="GeneID:4197842" CDS 256643..257065 /gene="flgA" /locus_tag="RD1_0259" /note="required for the assembly of the flagellar basal body P-ring" /codon_start=1 /transl_table=11 /product="flagellar basal body P-ring biosynthesis protein FlgA" /protein_id="YP_680671.1" /db_xref="GI:110677664" /db_xref="GeneID:4197842" /translation="MIRLALISWLMCLPLALFAEVVVPAKTIRANATITASDITLKPI QNENAYTLMADVVGQEARTTLYAGRPILFDDIGPPAIVSRNQIVLLSYQSSGLKILTE GRALQRGGVGDRVRIMNLDSRATLFGQVQADGSVRVSN" gene 257075..257806 /gene="flgH" /locus_tag="RD1_0260" /db_xref="GeneID:4197843" CDS 257075..257806 /gene="flgH" /locus_tag="RD1_0260" /note="part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod" /codon_start=1 /transl_table=11 /product="flagellar basal body L-ring protein" /protein_id="YP_680672.1" /db_xref="GI:110677665" /db_xref="GeneID:4197843" /translation="MKNVFLCVMTAALVMSGCARLDHLGKPPSFSPASATKEHTAMLS PGLPLRVDTSTPTDDASLWSGARQSLFGDRRAVQQGDILTVVIEIDEEAEISNATDRS RSGSESLGIPSLFGLPQRIDRELPTGATLSDAVSINSSSNSSGDGSVKRNEKLTLRVA ATIVDVLPNGVLSIAGSQELRVNFEMRELLVSGYVRPEDISRKNEITYDKIATARVSY GGRGQITDVQQPRWGQQALDIVLPY" gene 257816..258316 /locus_tag="RD1_0261" /db_xref="GeneID:4197844" CDS 257816..258316 /locus_tag="RD1_0261" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680673.1" /db_xref="GI:110677666" /db_xref="GeneID:4197844" /translation="MKKILPVLMLLLGSAAGVGAGVYLRPPPTEEAAAPEETAEEGSA ATEKEEAQDDLPIAGKEYVKLSNQFVVPIVEKDRVSSMIVMTLSVEAPQGQGEVIYDL EPKIRDVFLRILFDHAAIGGFRGAFINNENLDVVRRNLRDGAIKTFGEDLISDVLIFE IARQDY" gene 258378..258602 /locus_tag="RD1_0262" /db_xref="GeneID:4197845" CDS 258378..258602 /locus_tag="RD1_0262" /codon_start=1 /transl_table=11 /product="transposase, putative" /protein_id="YP_680674.1" /db_xref="GI:110677667" /db_xref="GeneID:4197845" /translation="MGTSIYSDDFTRDAVHGITVRGNPVWEASELLTDSAHSPFKWIS RFGETVRQAISIEQQAMNRHLQRELAGVTR" gene 258705..258971 /locus_tag="RD1_0263" /db_xref="GeneID:4197846" CDS 258705..258971 /locus_tag="RD1_0263" /codon_start=1 /transl_table=11 /product="inverted repeat region" /protein_id="YP_680675.1" /db_xref="GI:110677668" /db_xref="GeneID:4197846" /translation="MKKSRFSEEQIIGILKEHQAGLGARELCRKHGISDATFYKWRSK YGGMKVSDARRLKTLESENATLKKMLAEQMMDVATLKEMLGKNL" gene 259000..259518 /locus_tag="RD1_0264" /db_xref="GeneID:4197847" CDS 259000..259518 /locus_tag="RD1_0264" /codon_start=1 /transl_table=11 /product="integrase, catalytic domain, putative" /protein_id="YP_680676.1" /db_xref="GI:110677669" /db_xref="GeneID:4197847" /translation="MGDDDQNQRWSLDFMLDAHEDGRRYRVLNVIDDFSQECLAAVVD TSIDGAHVARELDRIAELRGYPCLVVSDNGAELTSNVMLKWQEDRKVDWHYIAPGKPM QNGLVESFNARMSEECLNEHLFPSLRHARHMIAARRAGYNHQRPHSSLDGLTPWEYHQ RSREDQNLNRAN" gene complement(259899..260636) /gene="fliP" /locus_tag="RD1_0265" /db_xref="GeneID:4197848" CDS complement(259899..260636) /gene="fliP" /locus_tag="RD1_0265" /note="FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus" /codon_start=1 /transl_table=11 /product="flagellar biosynthesis protein FliP" /protein_id="YP_680677.1" /db_xref="GI:110677670" /db_xref="GeneID:4197848" /translation="MKMTRITLLAVVLIGLFTPSVSLAQDLSISLGDDGSLSARTIQL FILITVLSLAPGLAIMITCFPFLVTVLSILRQAIGLQQSPPNMLIVSLALFLTYFIME PVFQAAWQNGIQPLTDNAIDAETAFVRTLEPFRIFMAGRLDPDTFFAMAELRSETIDA APTAEAPLSVLVPSFLLSEISRAFQIGFLVFLPFLIIDLVVAAVLMSMGMMMVPPVIV SLPFKLAFFVLADGWNLIAGSLVQSYF" gene complement(260633..260926) /gene="fliN" /locus_tag="RD1_0266" /db_xref="GeneID:4197849" CDS complement(260633..260926) /gene="fliN" /locus_tag="RD1_0266" /codon_start=1 /transl_table=11 /product="flagellar motor switch protein FliN, putative" /protein_id="YP_680678.1" /db_xref="GI:110677671" /db_xref="GeneID:4197849" /translation="MDDGPMESVGGLDANNPFTSVPIEVTVCVGKARPLIRDLVTLGE NAVLSLDKSVEDPVDLYIGDRLIARGMLEEKDDDQSGQLIVRLTEVIDLKSGL" gene complement(260919..261518) /locus_tag="RD1_0267" /db_xref="GeneID:4197850" CDS complement(260919..261518) /locus_tag="RD1_0267" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding" /protein_id="YP_680679.1" /db_xref="GI:110677672" /db_xref="GeneID:4197850" /translation="MAVSHRYKNFADAKQTSPDKLNSNSEAVEDQKLQAFEAGYQAGW DDATKAQTDEKERITAELGQNLIDMKFTYQEALSELTVSIEPVMKAIVEKLFPEAMRA ALSAHILDQVASMVDAKTDRSIEVVVSTGNVERVTNLIGSTSEQPMNVIAEPTLADGQ AFVRLGETERQIDLNSLMEGVSKAIEAFFHEAHRESDNG" gene complement(261518..263140) /gene="fliF" /locus_tag="RD1_0268" /db_xref="GeneID:4198448" CDS complement(261518..263140) /gene="fliF" /locus_tag="RD1_0268" /note="the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod" /codon_start=1 /transl_table=11 /product="flagellar MS-ring protein" /protein_id="YP_680680.1" /db_xref="GI:110677673" /db_xref="GeneID:4198448" /translation="MQQIVTAWTGLPLRRQVIVALATGAMFFAILAMSRMATAPNMTL LYAGLENGAAGDVVAALEQRGAVFEVRGGSIFVDSSQRDELRMTLASEGLPANSTQGY ELLDTLSGFGTTSQMFDAAYWRAKEGELARTIVSSPHISMARVHIASTGSNPFQRGVT PKASVSVTPSGAAITPQQGKAIRFLVSSAVAGLASEDVAVIDANGALIGNADEVAPTI GGEDKADVLKARVQRLLEARVGFGNSVVEVSVDTVTESEAIRERIFDPESRVAISTDT EERNTSSSEAGGGDVTVASNLPDQDGAGGENSSSQNNETRERVNYEVSETEREILREP GAIKRVTVAVLVNEMTITDEAGQETVTPRDESELEALRDLVASAVGFDEARGDIITIK SMGLQSVPLQGTAAGTSLMSNFNIDVMSAIQMAILALVTLILGLFVVRPLLARNDLND APAVAALPGATDGETDGLGLDGEIDGDDFQLPDLPVISDFGDASGELPDLNIGSGMSE DPVDRLRTMIGERQDETVEILRSWLEDKEESV" gene 263263..263754 /gene="fliL" /locus_tag="RD1_0270" /db_xref="GeneID:4198449" CDS 263263..263754 /gene="fliL" /locus_tag="RD1_0270" /codon_start=1 /transl_table=11 /product="flagellar basal body-associated protein FliL" /protein_id="YP_680681.1" /db_xref="GI:110677674" /db_xref="GeneID:4198449" /translation="MTDATNEESAEAPKSGKLPLIVGAVLAIIGGGGGFYAASSGMIF ATESKKETVEEEKETSNEFSDISFLPLEPMTISMPRDSAYKHLRFRGELEVPKEYAED IKKVTPRIIDVLNGYLRALQVADIEEPASLTRLRSQMLRRIQIVAGPGRVNDLLIMEF VLN" gene 263765..264133 /locus_tag="RD1_0271" /db_xref="GeneID:4198450" CDS 263765..264133 /locus_tag="RD1_0271" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680682.1" /db_xref="GI:110677675" /db_xref="GeneID:4198450" /translation="MDVIADIFLAAGAFGAGIYCYILGRRLNKFNDLEKGVGGAVAVL SAQVDDLTKTLAAAQSTASVSAETLTQLTVRAEAMSQRLELQMASLHDIPPQESTVAA AETSKVQQTTAEPMFIRHRA" gene 264145..264738 /locus_tag="RD1_0272" /db_xref="GeneID:4198451" CDS 264145..264738 /locus_tag="RD1_0272" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680683.1" /db_xref="GI:110677676" /db_xref="GeneID:4198451" /translation="MKINMLRRNGRGSVLLICCLLIGSAAIRIGSEAGKAVATENPFP APAISEAKEESAGSEETKADFSKMLIAFQEREARIERLERQIDRRQKALEVADAEIEK RLQVLQDAENALRSMLAIADTAAEDDVVRLTSVYENMKPKVAAALFEEMEPAFAAGFL GRMRPDAAAGIMSGLTPNKAYTISVILAGRNAEAPKG" gene 264805..265674 /gene="motA" /locus_tag="RD1_0273" /db_xref="GeneID:4198452" CDS 264805..265674 /gene="motA" /locus_tag="RD1_0273" /note="With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine" /codon_start=1 /transl_table=11 /product="flagellar motor protein MotA" /protein_id="YP_680684.1" /db_xref="GI:110677677" /db_xref="GeneID:4198452" /translation="MIGIIGIITVFAMVFGGYLAAGGKMGIIFKALPFEMTMIGGAAV GAFLISNDMSAIKHTMRDLGRVFKGPKWSHEDYKDLLCLLFELIRLARQNPVAIEEHI EAPEESSIFSKYEKILKDKEAVALICDTLRSASMNYDDPHQVEEVLEKRMEANMHHAM HSSHALQTVADGLPALGIVAAVLGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAY GFVGPFAAKVKSVTEEDGHFYQLIREVLVANLHAHATNICIEVGRQNTPSHHRPSFAE LEEALKSVKQNAA" gene 265671..267926 /locus_tag="RD1_0274" /db_xref="GeneID:4198453" CDS 265671..267926 /locus_tag="RD1_0274" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680685.1" /db_xref="GI:110677678" /db_xref="GeneID:4198453" /translation="MRKLTLLIFVAVLFPLRLMAEPIVVRSGEHNTFTRLVMQLPTDV EWSIAQAEKNPILKLENYDGGFDLSVAFEIIPRTRLQALVAKASQLELQLACNCVVDA FLEQNSFLVIDITNSDRPVLEDVVDAGSETEAISIPASGFSYGELLWSQSDQQIAQSS ESVVQDGSSEAGIVTDEQSLSMESELVSETQERLLAAFSSAASRGILTPKPDVSISNP PRNAETPPAEIFDSSEQIPIIATPLAGNMRISNSSDIPESGLERDTVASSPVCMDPAV VDVASWGHEEDMGKQIGTSVLGLYDPSGRLMPEKVLAHARLQLYFGLGQEAKQTLEMA PSLKAQYPELLDIASVLEFGHAQNPRSLHRFADCDSDLALWALLAASEIPPDQTVNAL AALRGLDKLPSHLKSFLAQKVSERLAARGDVANASIALRSYQRLTDGDDEPRLVHAEL ADLRNEAAQAEAVINDIVNSETSETAEAIIELIDRQVAAQTPVEADVALLAETYALEL RNSEKGPVMLRAFVLAAASSGQYTKAFETLDTQNSALDVQTRTELTSFAFTELADGAT DIDFLEAYFDLFSGKKDDLNQKAIVATAQRLFDLGFHTEAASVLLNRPIEPLSPDARL LKSRLALLENDYQQSYDLISDLNGTDAALIKGQAMQGLGKPEIAAQYFSVAEAETDAR DSAWLSDDWNNLLTEDDMVFGQLRAIVNEPTDRIPQNNEMINNSNQAIASSANARLTL EGLLTELEVQN" gene 268321..268422 /locus_tag="RD1_0275" /db_xref="GeneID:4198454" CDS 268321..268422 /locus_tag="RD1_0275" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680686.1" /db_xref="GI:110677679" /db_xref="GeneID:4198454" /translation="MARETTDQRRCSDFVSDALLNDQRFHVLCIMED" gene 268503..268964 /locus_tag="RD1_0276" /db_xref="GeneID:4198455" CDS 268503..268964 /locus_tag="RD1_0276" /codon_start=1 /transl_table=11 /product="integrase, catalytic domain, putative" /protein_id="YP_680687.1" /db_xref="GI:110677680" /db_xref="GeneID:4198455" /translation="MRKRGTRRPIGLPETIHQWWRPGFVSDAFTPSHPLRRKRLPGNG WPEVPCSGHHRRLQPGVFGACARQVTVWRAADTRAGSDHSAARNWYQYAKVDWHCIAV GKPPQNGFVESFYGRMRDDFLNQHLFSSLADARSEIAKCKDDHNQNQPTPR" gene complement(269452..270537) /locus_tag="RD1_0277" /db_xref="GeneID:4198456" CDS complement(269452..270537) /locus_tag="RD1_0277" /codon_start=1 /transl_table=11 /product="ABC transporter ATP-binding protein" /protein_id="YP_680688.1" /db_xref="GI:110677681" /db_xref="GeneID:4198456" /translation="MTDAPPLVRIEGISKSFGNTVALDNLTLDIARGEFVTFLGPSGC GKSTTLRILGGFERPDKGRVILDGEDVTTQPPEKRHVNMVFQDYALFPHMTVRQNISF GLELKGMDKANIKRRQDEIMAFLELDGFGDRYPGQLSGGQRQRVALARALAPDPALLL LDEPLGALDAKLRGQVQQELKSIQQRTHKTFFFVTHDQEEALTMSDRIVVMNKGRVEQ DGTPEELYFHPATRFVAEFIGETNLLSGQMRARDGDRIVMDWFGHTLSGQAPAGPLQT GDAITASVRLEKLGFHTTRPNAANAVQGKVVGKTFLGSRMALDLVIEETEGAVLRAFV DAETGQAVGADPIWIGWDSDSMAVLQD" gene complement(270534..271325) /locus_tag="RD1_0278" /db_xref="GeneID:4198457" CDS complement(270534..271325) /locus_tag="RD1_0278" /codon_start=1 /transl_table=11 /product="spermidine-ABC transporter, permease component, putative" /protein_id="YP_680689.1" /db_xref="GI:110677682" /db_xref="GeneID:4198457" /translation="MRRGNRILLSCIYWAFVLYVFVPLLLMILMGFKDSKFIGFPIRS WTLDWYMGVFVDAELLSTLGYSVTIAILSTLISVVVGTWIAVLLEGRKFIGRAAVFGL TLLPALVPGIISAIAFRIYARWLGIEPGMGAIIWAHAVHNVPFVVLVVMARLSTLPKS QIEAARDLGADPIIAFLRITVPYLIPAILGASIFCLLLSFDDFVRSFFLGGYEPTLPV LIFAMLRSGMSPEINAIATVALVLTAAIGIWAERFTRRMNRDTNP" gene complement(271322..272299) /gene="potB" /locus_tag="RD1_0279" /db_xref="GeneID:4198458" CDS complement(271322..272299) /gene="potB" /locus_tag="RD1_0279" /codon_start=1 /transl_table=11 /product="spermidine/putrescine transport system, permease protein, putative" /protein_id="YP_680690.1" /db_xref="GI:110677683" /db_xref="GeneID:4198458" /translation="MRNEAAAQGSIPQNGADRTFWGRLSGWTAYRTVMGIATASPRRQ FLILAAFPILWVLTQHLGPMVQMLRVSLMDAYPVAPGVEQSFTLDNYARFFGDQIFWQ PFFRTLSFAAVFTFCTLILTYPVAYFLARHVSRKNRMLLLLLLLIPFWVGEIVRTYAI MILLGNTGAVNLVLQWFGLIDRPIPFMYTSFSMGVGIVYLTALYMLLPLYSALEKLPD SYNEAAADLGAGAWTRFRRVTLPLTLEGISSGCTLVFLISTGFYATPVLLGGPSTTVF AQTIAGFFHVAGDEWPTGAAFATIMFAGAIVLTAVFQKLMYALRKGDTK" gene complement(272377..273483) /gene="potD" /locus_tag="RD1_0280" /db_xref="GeneID:4198459" CDS complement(272377..273483) /gene="potD" /locus_tag="RD1_0280" /codon_start=1 /transl_table=11 /product="spermidine/putrescine-binding periplasmic protein, putative" /protein_id="YP_680691.1" /db_xref="GI:110677684" /db_xref="GeneID:4198459" /translation="MTKLIYDRRRFLGTAAMTGVALASPAYLRRASASGGEVNIWTYN DFVPAAFKDQFEAETGIKVNVRLVDDQGKQFNLLAAEAPNPTVDIMTVAGHRFLQFID SELLAPLDTDRLANWGNINPTFSESDWATINGNKWGAPILSGMEVLSYNTELVSPEEV TSWDALFSEKFKGQTAYIIQDMMSIIMLKMGYDGNMVAYMDDPEKAAAIVEEAKQFLI EHKPLVRKYYDSGAEIQQMFVNQDIALGHSWNGPAAALINDGFPLAMTIPEEGSYGFV YTYNIANNAPNVDNAYTFINAILASPEIGAAMTRASGFISTYKDASNYLTDLEKKSTA FPDEELARLQFFRAEANKMKYELVDPAVEAIKAA" gene complement(273528..274634) /locus_tag="RD1_0281" /db_xref="GeneID:4198460" CDS complement(273528..274634) /locus_tag="RD1_0281" /codon_start=1 /transl_table=11 /product="dehydrogenase, putative" /protein_id="YP_680692.1" /db_xref="GI:110677685" /db_xref="GeneID:4198460" /translation="MSDAVRIGIAGAGSVAFGTAALLHQQGHDPMLWSPSGAGTEALK SAPLRASGAIEATFEPRIAGSAAELARDNDILLLALPAYGHKAVMDALVPHIRDGQHV IISSHASLGAVYLMQLLAARGIKAPITAWGTTVVTGRRQTGSAVQVNTVRKRVDLCTV PDTQSDRALDACKRLFGDRFQPRDGLLAISLSNLNPQNHMGIALGNITRMERGETWSQ GQNVTPTIGRLLEQLDLERLAIAEALGLQVKTIFEHFHLSFHVPVASISEMNQQMHAQ GNGGTGPATADSRYVTEDVPYGLQLTAVLGQLAGTPAPLHEAGIAIFSAMYGRDFSKE NALLAALELENFTLDDLTQAARTGLLGTAPSVPQ" gene complement(274631..275218) /locus_tag="RD1_0282" /db_xref="GeneID:4198461" CDS complement(274631..275218) /locus_tag="RD1_0282" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680693.1" /db_xref="GI:110677686" /db_xref="GeneID:4198461" /translation="MARVIHKFTRNVPHWQPRLTPVKLAEATPEQLEALQVTPSNTKV SDYVLTLAHDVESLKVRSPLFNAIMYDAGGLSRSERELGALAASMVNRCIYCAAVHAD RHAKIEKDTTTTDALFAAGEKADLNPRDRAIFDFARKSAEAPPTAGAADMEALRQVGL SDAEILDLILSAALFGWANRLMHVLGDPVRKTEDA" gene complement(275218..275697) /locus_tag="RD1_0283" /db_xref="GeneID:4198462" CDS complement(275218..275697) /locus_tag="RD1_0283" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680694.1" /db_xref="GI:110677687" /db_xref="GeneID:4198462" /translation="MSIFETTSLRVAGVEVDGKTAKAISGRHNIIEMTQAAEDAVLRP RDSGAFGHNLRAALAARVARLAQDDVLASHYLARAGDKAALADPTETGAAQGLSAVLA FIDKVANQTRDIAAEDVSGLQAAGVEDADIVRLCELVAFLAYQTRLIAGLRLMQGAA" gene complement(275694..277133) /locus_tag="RD1_0284" /db_xref="GeneID:4198463" CDS complement(275694..277133) /locus_tag="RD1_0284" /EC_number="1.1.1.-" /codon_start=1 /transl_table=11 /product="oxidoreductase, putative" /protein_id="YP_680695.1" /db_xref="GI:110677688" /db_xref="GeneID:4198463" /translation="MGLPALEGRLKEDLAFLCYPGKAWVPKREGVTDVVIIGGGMCGM VAWFGLATGGIRNVRVLDRAETGREGPWLSYARMETLRSPKMLTGPAFGHGALTFQAW YRAQFGAAAWEALDKIPRPMWMEYLQWYRTVLEVPVENGISVDHVEPEGDLLRLTVTG AETPTILTRKLIFATGRDGTGGPNIPDFIKNLPGHLWAHSADEIDFTRLAGKRVAVIG VGASAVDNAAEALEHGAAEVRHLIRRKEMPTINKMMGIGSFGFTAGFADLPDEWRWRF MQYSFATQTPPPHGSTLRVSRHDNAYFHFGKATTRVDPQGDGAIIHFADGTFYEADFV ILGTGFVIDPMARREFGKTAGDILLWQDVYTPPEDEQSGDLGRFPYLNPDFTFREKQP GTAPWLANVYCFNYGASASLGKVSGDIPGISEGAAWLSRAVAAELYAEDIEAHWEGMQ AYDTPELRGDEWEATPLEIQPEPQKGRVA" gene complement(277202..278539) /locus_tag="RD1_0285" /db_xref="GeneID:4198464" CDS complement(277202..278539) /locus_tag="RD1_0285" /codon_start=1 /transl_table=11 /product="NreB protein, putative" /protein_id="YP_680696.1" /db_xref="GI:110677689" /db_xref="GeneID:4198464" /translation="MSSPLSSPTFRRLFTAQICSLIGVGLLTVALSLAAFRIGGAAAG GQILGLLLALKMVAYVLLAPLAETLLSGVSRKRAMVSLDVGRMLLLLPMAFVSQPWLV ALLAFGFFVLSAGFTPLFQSVIPDILPEEATYTKALAWSRVAYTMEAVMSPVIAAAML KIVTGESLFYAAALAFAGSVLALLLARLPQFRDAAREGPFLKRVGHGFWIYRRTPRLR GLFLLNLSLSLSMAWVLVNSVVYAGARLGDSEHYFPILMACYGAGAALGAVIVPKLLT RMSERSAMIIGALGFAAVGALFAVLPAVPMPYLGAVWVAFGVASSLVLTPGGLVITRS AAQKDRASVFAAQFSASHAGWLVAYPLAGWLGSLLSLETALLSLASLSTVLVLVALRV WPADDPVDLAHCHPELPDDHPHLEQVPASGAQHRHIHAFRIDELHPIWTERSI" gene 278721..279437 /locus_tag="RD1_0286" /db_xref="GeneID:4198465" CDS 278721..279437 /locus_tag="RD1_0286" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680697.1" /db_xref="GI:110677690" /db_xref="GeneID:4198465" /translation="MTQEHGHSPTEVARRLSAGQRAGHLKDMIYGGIDGAVTTFAIVA GVAGAGLSHHIIVALGVANIIADGFSMAASNYSGTKAELDDRKRIIQVEERHIEQHPD GELEELRQILQMRGLSGDVLEEATTAISQSKTNWIDMMLTDEYGLSRVEPEPMKAALA TFAAFLVAGSIPLIPFLLNLDDAFSISIFATLLTFFLIGTGKSRWSLSKWWKSGFETL LIGGVAALLAFSVGSLFHPG" gene complement(279456..280064) /locus_tag="RD1_0287" /db_xref="GeneID:4198466" CDS complement(279456..280064) /locus_tag="RD1_0287" /EC_number="4.2.1.17" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="YP_680698.1" /db_xref="GI:110677691" /db_xref="GeneID:4198466" /translation="MIDVDRTGDIWTVTLNRPEKANSLTEQMLVDLRDTMRAAQAARA VILSGSGKVFSAGADLEAARAGLATSPLWEEVSQAVASLPGLSVAALNGTLAGGAFGM ALACDLRIAVPGANFFYPVMKLGFLPQPSDPGRLAALIGPSRAKLILMGGQKIAADEA LAFGLIDRIVAPDDLMAVAQTLVADTVAADSAIATGIKDMCR" gene complement(280061..280810) /locus_tag="RD1_0288" /db_xref="GeneID:4198428" CDS complement(280061..280810) /locus_tag="RD1_0288" /codon_start=1 /transl_table=11 /product="dehydrogenase" /protein_id="YP_680699.1" /db_xref="GI:110677692" /db_xref="GeneID:4198428" /translation="MNMTGKTVMITGASRGIGAEAARVFAQAGANVALLARSQQQIAD LAGEIGERAVAIPCNVARYSDMAKAVAATQEMFGSLDVLINNAGVIEPISHLAEAEPD AWADVVDVNLKGVFNGMHAALQVMKPAGGGTIITISSGAAHGPVEAWSHYCTSKAGAH MLTRCLDHEESQHGIRAMGLSPGTVATQMQREIKSSGINPISQLEWEVHIPADWPARA LLWMCSPEADEWCGREISLRDEDIRRKVGLT" gene 280944..282452 /locus_tag="RD1_0289" /db_xref="GeneID:4198429" CDS 280944..282452 /locus_tag="RD1_0289" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680700.1" /db_xref="GI:110677693" /db_xref="GeneID:4198429" /translation="MPRITRHFMASTALVLIAPAAFAELSADDVWSDWKTYISGLGYS VTGQEARAGDVLTVTGVAITSGDASLGGGRISMDRIVLTERDDGTVTVALPTVMPFEM ATPNDTGSTTRVSADYRQTGLSIVASGTPNDLQYEYSAQTISLESTGFEVNGQVLPAQ SNAFVITLDDISGTTDMVLDAHRRYTQDLEIGAARYALKATDAASGGSSDMSGQMQSL TFDGQSTLPLRAVDTNDLEAMLAAGFTAGGTFGFAANALTLNVTSPTGPSDASVIGQS GRIGVTLGQDGLTYDVAQDDMQVEMTSPQFPLPINFNVAQTAMNIAMPIRKSEAPDDF ALGFTLDGFTMSDMLWGLFDPGGQLPRDPATIALDLAGKARLMFNFLDPSVAAEIDPG TAPAEIDKLDINRVQITVAGAELVGNGAFEFDNSAEGAPKPAGAVDLTLTGANGLIDK LVAGGLLPEEQAMGARMMMGLLAVPGNAPDTLNSKIEINDQGHVMANGQRIQ" gene 282483..283883 /gene="pmbA" /locus_tag="RD1_0290" /db_xref="GeneID:4198430" CDS 282483..283883 /gene="pmbA" /locus_tag="RD1_0290" /codon_start=1 /transl_table=11 /product="PmbA protein, putative" /protein_id="YP_680701.1" /db_xref="GI:110677694" /db_xref="GeneID:4198430" /translation="MQRGSEAATSTPPLTEHMMTQALSDLNEQLLQAARRAGADDADA MAVRGTSLGIEVRHGALEQAERSEGIDIGLRVFLGRRSAIVSASDTRSDTLKDMAERA VAMAKEAPEDPCAGLANADQITQGYHIAALELYDPTPEPSPAALQEDAARAEAAALGN PQVSQVQSASAGYSSREVHFAATNGFRGGYARTDRGLSCVAICGTGTEMERDYDSDSR IFQSDLRSPEDIGTRAAARAVERAGARKPPTGSYPVLFDERVSSTLIGHLLMAANGSS VARGASWLRDAKGEQVLPSGISLHELPHRPRTSGSRPFDAEGLPTKARDIVADGVLTG WTMDLATARKLGMSSTGNAARSASSGPSPTSWNVTLTQGDQSRADLIADMGTGLLVTS MIGSTINSNTGDYSRGAAGIWIENGEMTYAVNECTIAGNLRDMLLNIVPANDARAHLS RVVPSLLVPGMTLAGV" gene 283870..284664 /locus_tag="RD1_0291" /db_xref="GeneID:4198431" CDS 283870..284664 /locus_tag="RD1_0291" /codon_start=1 /transl_table=11 /product="inositol monophosphatase family protein" /protein_id="YP_680702.1" /db_xref="GI:110677695" /db_xref="GeneID:4198431" /translation="MQASDLDLITDAIVMAGRVATSFTGQSTQSWDKPGGAGPVTEAD LAVNTYLETVLRLARPDYGWLSEESEDTGDRLSRDTVFIIDPIDGTRSFVDGSSTWAH SVAISHKGRITAGAVYLPLRGLLYTAARGKGAMLNGAPITVSAKDDLENADVLAAKPM IAPDHWPNGVPGFNRSHRPSLAYRLALVGQGRFDAMLTFRPTWEWDVAAGSLIVEEAQ GTSTDKGGKPLLFNNRDPRLNGMVASGKPLHYSLMQALAREGGSGA" gene 284674..284967 /locus_tag="RD1_0292" /db_xref="GeneID:4198432" CDS 284674..284967 /locus_tag="RD1_0292" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680703.1" /db_xref="GI:110677696" /db_xref="GeneID:4198432" /translation="MDRQRCSHSLFVLRTACMAQRLHLVFGGELVDPGKNTFKNVDDL HIVGIFPDYASAFDAWKAEAQRTVDNAHMRYFIAHIHRLRDEETAASSTEELE" gene 284974..286221 /locus_tag="RD1_0293" /db_xref="GeneID:4198433" CDS 284974..286221 /locus_tag="RD1_0293" /EC_number="2.-.-.-" /codon_start=1 /transl_table=11 /product="3-deoxy-D-manno-octulosonic-acid" /protein_id="YP_680704.1" /db_xref="GI:110677697" /db_xref="GeneID:4198433" /translation="MARSIGLTAYRALSKRSTERAYKPRGKRPRGTLVWIHAGEPQNM LAVQDLAQRLCNTRFGVHVLITLPDPASYEETLQSWVPHDLIQIEQVPSEHPHAVTSF WRHWMPEVAIWAWGGLRPNLVDQVHQSGCPIALIDADAAGFDGKRERWLPELSRQLLE PFVAIMVRSNAAVQKLQTLGIESARIDRKPPLQAGGNALACRDSDLADLTETLRGRPV WLANNIQEEELPVILQAHRQSLRLSHRLLLVLHPAHGGLSDGFAEKIATDDLRHADWT AGEDPDDASQVLLTEDHGDLGLFYRVAPVTFMGSSLVSGYSGRNPFEAAALGSAVLYG PHVSRFMPFYSRLAKAGAARIVKDVETLGAAVTQLIAPDQAAAMAHAGWDVVSEGADV TDRVIDLVQAALDGELETAHARA" gene 286208..287203 /gene="lpxK" /locus_tag="RD1_0294" /db_xref="GeneID:4198434" CDS 286208..287203 /gene="lpxK" /locus_tag="RD1_0294" /EC_number="2.7.1.130" /codon_start=1 /transl_table=11 /product="tetraacyldisaccharide 4'-kinase" /protein_id="YP_680705.1" /db_xref="GI:110677698" /db_xref="GeneID:4198434" /translation="MRAPDFWYTPPQAPALLARLLQPFGKIYGMATARRLAKGTPVKL DVPVICVGNLNAGGTGKTPTVIAVLTTLMDMLETPHVVTRGYGGSLKGPVRVDPSKHT AKQVGDEPLLLAAFAEVWVARDRAAGCAAAAQGGASVVVLDDGFQNPSVHKDFSLIVV DAEKGFGNGRCLPAGPLREPVDIGLKRADALLSVGAAEAQARFDSSTLPTDLPHIRGA LTPLQTGMDWSDMRAIAFAGIAHPEKFFATLRALGANVVHSEPLDDHQPLSTALMSRL EADAKRQNAQLVTTEKDAARLPNSFRTKVITLPVRLSFDGQENALADLLRPVVKS" gene complement(287267..287938) /gene="bdbD" /locus_tag="RD1_0295" /db_xref="GeneID:4198435" CDS complement(287267..287938) /gene="bdbD" /locus_tag="RD1_0295" /codon_start=1 /transl_table=11 /product="thiol-disulfide oxidoreductase D, Putative" /protein_id="YP_680706.1" /db_xref="GI:110677699" /db_xref="GeneID:4198435" /translation="MSRMMIISAAVAVIGLGAYFVTSPGTNPVTPANPLGAANAQEAA DIDTSSIMDMTLGNPDAPVTVIEYASYTCPHCARFHEGPFKQLKADYIDTGKINFVYR EVYFDRYGLWASMIARCAGTPESFFGMSDLIYQKQSEWSRAGDPAAIVDELRKVGLLA GLDRDTMEACLQNGEKAQTLVAWYQENATADGIESTPSFLINGQRYSNMSYAEMAELI DAAAE" gene complement(287952..288461) /locus_tag="RD1_0296" /db_xref="GeneID:4198436" CDS complement(287952..288461) /locus_tag="RD1_0296" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680707.1" /db_xref="GI:110677700" /db_xref="GeneID:4198436" /translation="MPPRRASTKGFTRTSSLLTQRIRTASESRGFAQSRLLTHWSEVA GEEMARISRPVEVSYGRGGLGATLTLLTTGANAPMLEMEKEKLRARVNAVYGYNAIAR VRVTQTAATGFAEGQVDFMLGDAKSKTAPIDPALRQKAADTVQPVADEGLRSALALLG ENILNKTNR" gene 288546..289613 /gene="mutY" /locus_tag="RD1_0297" /db_xref="GeneID:4198437" CDS 288546..289613 /gene="mutY" /locus_tag="RD1_0297" /EC_number="3.2.2.-" /codon_start=1 /transl_table=11 /product="A/G-specific adenine glycosylase, putative" /protein_id="YP_680708.1" /db_xref="GI:110677701" /db_xref="GeneID:4198437" /translation="MRENPDDPQVLSDAILAWYDVHARDMPWRVPPQARRAGQTPDPY RIWLSEVMLQQTTVATVKSYFERFTARWPTVRDLAAAQDADVMAEWAGLGYYARARNL LKCARTVDQDYGGTFPADHAELLKLPGIGPYTAAAIASIAFDLRHTVLDGNVERVMAR LHDIHVPLPASKPILMEKADALTPVDRPGDYAQAVMDLGATICTPKSPACGICPWRDP CAARAEGTAADLPKKTPKKAKPTRHGTVFLAQRADGAWLLETRPDKGLLGGMLGWPGS DWIDVSHPLPEAPPPCAAEWQLIDGEVRHTFTHFHLILHVFRAQVAIGTEPETGGFRD AAEFKPTDLPTVMRKAFDLAR" gene complement(289727..290821) /gene="ccrM" /locus_tag="RD1_0298" /db_xref="GeneID:4198438" CDS complement(289727..290821) /gene="ccrM" /locus_tag="RD1_0298" /EC_number="2.1.1.72" /codon_start=1 /transl_table=11 /product="modification methylase" /protein_id="YP_680709.1" /db_xref="GI:110677702" /db_xref="GeneID:4198438" /translation="MTKTKGAAALPLNTIIDGDCIEVMNGLPEASVDLIFADPPYNLQ LKGDLHRPDNSRVDAVDDEWDQFSSFKAYDNFTKAWLKAARRILKPDGAIWVIGSYHN IFRVGAELQNQGYWILNDVVWRKSNPMPNFRGKRFTNAHETMIWAGRDESSKYTFNYE ALKALNEGIQMRSDWVLPICTGHERLKDENGDKAHPTQKPESLLHRVLVGATNPGDVI LDPFFGTGTTGAVAKMLGRDFIGIEREAAYRKVAEKRIAKVRKFDREALQVSVSKRAE PRVPFGQLVERGMLRPGEALYSPRGQVAKVRADGTLIGNDVKGSIHQVGAHLEGAPSC NGWTYWTFKQDGKKIPIDVLRQQIRSEMSG" gene complement(290914..291510) /gene="rnhB" /locus_tag="RD1_0300" /db_xref="GeneID:4198439" CDS complement(290914..291510) /gene="rnhB" /locus_tag="RD1_0300" /EC_number="3.1.26.4" /codon_start=1 /transl_table=11 /product="ribonuclease HII" /protein_id="YP_680710.1" /db_xref="GI:110677703" /db_xref="GeneID:4198439" /translation="MALGARRVAGVDEVGRGPLAGPVTAAAVVLDPANIPEGLNDSKQ LSVKRRNLLGDALASSADISVGHASVEEIEQHNILRASHMAMLRALAGLRLRPDFVLI DGAMVPQGLNLRAQPVVKGDTRCLSISAASIIAKIARDKIMVDLAQQHPGYGWETNMG YGSKSHISALRNLGVTPHHRRTFKPVHHMLYQDKNVKP" gene complement(291742..292227) /locus_tag="RD1_0301" /db_xref="GeneID:4198440" CDS complement(291742..292227) /locus_tag="RD1_0301" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680711.1" /db_xref="GI:110677704" /db_xref="GeneID:4198440" /translation="MTRRFIATVVSAAIAVAVIGNTPARADEALARALAAVVGIAVVG AVIQNRLEDDRKDKQANRVTHTRSGVHHSNARYRDHGIKRANPRHTNRRLLPGDCLRS FNTGYARYRVFGKTCLEQKYGATRQLPQACKVQFRTNSKNRVGYGARCLRRAGYQLAR S" gene 292221..292688 /locus_tag="RD1_0302" /db_xref="GeneID:4198441" CDS 292221..292688 /locus_tag="RD1_0302" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680712.1" /db_xref="GI:110677705" /db_xref="GeneID:4198441" /translation="MSWGRSLSVVHGAAFGCCRSDNKLGRTRADRQYRAMVIRYHRPQ TPFVIECHGDPAQVHAMRYSVFIAAALVTFSLAQPGMAAGCYADYKAKQDDPLRLHYG VAQVSECSKKAARAELTARLAPKGWTLLNVISVFDQSGLAERKESAGPNYLRY" gene 292660..293364 /locus_tag="RD1_0303" /db_xref="GeneID:4198442" CDS 292660..293364 /locus_tag="RD1_0303" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680713.1" /db_xref="GI:110677706" /db_xref="GeneID:4198442" /translation="MQDQTTSATDMRRSGGRIVGYGIAGILAILAVGVAMLFWALPDA NAFNARVEKLFVENDDLTTQAEIKLLEILAQSGTAFSETLMSYRVVIFVLLVFATAML IAALVFLVMLVGFNRRMAQIERVGIQVNSLLISREENTVYLNNLGFKLTDAAMETMSV LAEARMDDDVLSGSEIEGMISGRKAVDCEEAAGATRIKRLRDTLGNQIVSELLVKNIA RRGYMLAIDKDVIKVI" gene 293443..294213 /gene="bphF" /locus_tag="RD1_0304" /db_xref="GeneID:4198443" CDS 293443..294213 /gene="bphF" /locus_tag="RD1_0304" /EC_number="4.1.2.-" /codon_start=1 /transl_table=11 /product="4-hydroxy-2-oxovalerate aldolase" /protein_id="YP_680714.1" /db_xref="GI:110677707" /db_xref="GeneID:4198443" /translation="MPAPLNTFKKSLSEGETLFGCWMSIAESYTAEILGNAGFDWLLI DGEHSPNDVRSIRDQMIALKSSDSHPIIRVPVGETWIIKQMLDLGAQTILVPMVETAE QAQELVRACRYPPEGRRGVGYAVGRASGFGQIDNYGPTADAQTCLLVQVENKTGLYNL DAILAVDGVDGVFIGPADLSASLGYLGQTMHPDIQATILKTIKRISDSGKAAGILTTD DGMIQASLDAGARFVAVAMDIAMLLNTGKSIAAKWKQG" gene complement(294210..295361) /locus_tag="RD1_0305" /db_xref="GeneID:4198444" CDS complement(294210..295361) /locus_tag="RD1_0305" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680715.1" /db_xref="GI:110677708" /db_xref="GeneID:4198444" /translation="MKSFHQPDDFYDSVPRETSFDHLTDLGRYTPLPDDWQIGVADIV NSTGEVAAGRYKTVNMVGAAVISAVMNGLNGRPFPFVFGGDGAGFAVGPDAEPAAREA LAAISVWARAEFAIGMRVALVPVADARAAGHDVKVARFQASPGADYAMFSGGGLLWAE TEMKRRRYVVAPAAEGTIPDLTGLSCRWAHMKARNGTILSLVVAPIPDADAADVAQVY KRVIDVAGQLDRGGHPAPQVGMVSRWPPAGATLEAHAARGSGSLGAARRKALLESLLA WVLIRTGLKIGGFDARRYARVVADNADFRKLDDGLKTTLDCDAETQSRLTAVLAQGAD QGIVRFGMATQEEAMMTCIVPSILTDDHLHFIDGAAGGYTQAAAQMKTR" gene 295514..296536 /gene="asd" /locus_tag="RD1_0306" /db_xref="GeneID:4198445" CDS 295514..296536 /gene="asd" /locus_tag="RD1_0306" /EC_number="1.2.1.11" /note="catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde" /codon_start=1 /transl_table=11 /product="aspartate-semialdehyde dehydrogenase" /protein_id="YP_680716.1" /db_xref="GI:110677709" /db_xref="GeneID:4198445" /translation="MGYRVVVAGATGNVGREMLNILAERHFPVDDITVLASRKSLGTE VSFGDKTLKTKDLATFDFTGWDMALFAIGSDATKEFAPKAAKAGCVVIDNSSLYRYDA DVPLIVPEVNADAIMDYANKNIIANPNCSTAQMVVALKPLHDRATIKRVVVSTYQSVS GAGKEGADELWDQTKSIYNPTDDKPPKKFTKQIAFNVIPHIDVFMEDGTTKEEWKMVV ETKKIIDTKIKVTATCVRVPVFVGHCEAINIEFEEHLDEDEAREILREAPGVMVIDKR EDGGYVTPVECVGDFATFISRIRQDSTIDNGLNLWCVSDNLRKGAALNAVQIAELLGT RVLKKG" gene complement(296611..297165) /locus_tag="RD1_0307" /db_xref="GeneID:4198446" CDS complement(296611..297165) /locus_tag="RD1_0307" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680717.1" /db_xref="GI:110677710" /db_xref="GeneID:4198446" /translation="MRTAVLILTLIVPQVVQAQDDSAMIKVQRGLEMPAHRALQSVIS ESDLAVFETDGCSGGMSWSWRVVADLFPDFEAAQGAHPPWEQCCVVHDRAYHNAAGAT SADQSFEARLSADQALQTCVVEQGEAQVKDLALRYDVDEDNIRLAYDMIATSMFNAVR FGGGPCSGLPWRWGFGYPGCIPGL" gene complement(297162..298934) /gene="glpQ" /locus_tag="RD1_0308" /db_xref="GeneID:4198447" CDS complement(297162..298934) /gene="glpQ" /locus_tag="RD1_0308" /EC_number="3.1.4.46" /codon_start=1 /transl_table=11 /product="glycerophosphoryl diester phosphodiesterase family protein" /protein_id="YP_680718.1" /db_xref="GI:110677711" /db_xref="GeneID:4198447" /translation="MFVRLIIAAVLVPLIAALLAITLSFSDQSALTDQDIARFLLTPV GAIGAVFIASLIIVAATIDIAVMTAVLRSDQRGAGKALAAAFGFLTRSLPRLAVFAGH LLVRVLVISLPFLAVAGAIALFLMRDFDINYYLANRPPAFMAAIASGGVIAVALALVL LERLSAWAVALHMSVFDLVPTRTAFQVSREKMRGHRLDLLKRLLSWLALRAAVAFVLV GTIGFLLAEIPPFFSGNLALFFTVTAVLIGIWVFVNSALNAIANGALSDILNEEFDRC LEARVARGDPGPETHAPRLAWLSGLAALFAVGSLFVGGTAFNQVGGAERVDVIGHRGA AASRPENTMAAVIKAIEDGADWVEIDVQETADGEVLVVHDSDFMKAAGVDRKVWDVTM EEVAQIDIGTWFDPIYADERPPLLRDVLEVVKGRSKLIIELKYYGHDVDLENRVIALV EAAGMQDQIATMSLKYPAVQKMRRLRPDWRSGVLAATAVGDMSGLDGDFLAVSAGRLS ARLLAQAQSVGKDVYAWTVNDAASMSRMISLGVDGLITDKPKLAREVIAYHETLSTPE RLMLRLGDTIGFAFDLTPETGAEM" gene complement(299130..299540) /locus_tag="RD1_0309" /db_xref="GeneID:4195501" CDS complement(299130..299540) /locus_tag="RD1_0309" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680719.1" /db_xref="GI:110677712" /db_xref="GeneID:4195501" /translation="MTKHAITLQLSDDLFKAVHDLATEQQGTVAEVVEDLVTEHLGGP KSAARRLPRAGEKLIFALQKLLFRDMAEARDWADLDDRLRKHGYFMKITLGGLALHTE TSGKRVCHTHDLGFSYGTFVRRFGPGKPKDPREL" gene complement(299577..299888) /locus_tag="RD1_0310" /db_xref="GeneID:4195502" CDS complement(299577..299888) /locus_tag="RD1_0310" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680720.1" /db_xref="GI:110677713" /db_xref="GeneID:4195502" /translation="MKTHQAKRVEITIEAIMQSRLTDALSAAKVTGYTVLPVLGGSGR SGEWVRSGEIGRASGMVQVVCIIRPERLDGLLDAAFGVVDKHIGVVSIMDCDVVRAER F" gene complement(299893..300870) /locus_tag="RD1_0311" /db_xref="GeneID:4195503" CDS complement(299893..300870) /locus_tag="RD1_0311" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680721.1" /db_xref="GI:110677714" /db_xref="GeneID:4195503" /translation="MDQILSLAANNLLSPIILSFVLGVAASLARSDLSVPEAAAKALS IYLLFAIGFKGGVSVAAHGVDAKLGLTLLVGIILSAGLPLIAFGLLQVMTGLSRLDAA AVAAHYGSISIVTFVAATSVLQSSGITYEGYMVAVAAAMEAPAILSALWLISRGGSER RMDSDLWREILLNGSIVLLVGAFFIGWITGEEGLSEISSFIVAPFKGVLCLFLLDMGL VAGRGLRSRSGVLKPGVLAFGLLMPVVGSSLGAVFGLLLGLSTGGVALLMVLSASASY IAVPAAMRVALPEANPSIYLTLSLGVTFPFNLTLGIPLYVAVASALTGA" gene complement(300952..301602) /gene="cynT" /locus_tag="RD1_0312" /db_xref="GeneID:4195504" CDS complement(300952..301602) /gene="cynT" /locus_tag="RD1_0312" /EC_number="4.2.1.1" /codon_start=1 /transl_table=11 /product="carbonate anhydratase" /protein_id="YP_680722.1" /db_xref="GI:110677715" /db_xref="GeneID:4195504" /translation="MDQAKPLPGYLVQRYHGWKATGYQENQSWYKQLARGGQHPRAMV ISCCDSRVHVSALFGADQGELFIHRNIASLVPPYEPDGDPHGTSAAVEYAVTMLNVAH VIVLGHSGCGGIQGCIDMCQGNAPDLEEKSSFIGRWMDILKPSYPLVAAENDPEIQAQ ALEKQSVLVSLRNLMTFPFINSRVDGGLLTLHGLWTDIGEGSLEVFHSKDQAFHAI" gene 301733..302128 /locus_tag="RD1_0313" /db_xref="GeneID:4195505" CDS 301733..302128 /locus_tag="RD1_0313" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680723.1" /db_xref="GI:110677716" /db_xref="GeneID:4195505" /translation="MRVRKMNHVLEIRLNETVHVCQDRLSALYAQLGEAGAEDVVCRA MEELALRLSHCSRLHAAGEADELRKCARSLIAISEQIGMLVLARVAADVIEALDGNDG PAVAATLSRLLRIGEQSLSAIWDLQDITI" gene 302192..303574 /gene="pepA" /locus_tag="RD1_0314" /db_xref="GeneID:4195506" CDS 302192..303574 /gene="pepA" /locus_tag="RD1_0314" /EC_number="3.4.11.1" /codon_start=1 /transl_table=11 /product="leucine aminopeptidase, putative" /protein_id="YP_680724.1" /db_xref="GI:110677717" /db_xref="GeneID:4195506" /translation="MTSLFADADDQTIPLHIIDEDSLEAWLGDQSQTVQAWVRANGFA ARIGQALLVPSDTGLPVMALAGFGTAKSRARGRFHLAAAASKLPAACYAIASGLPQAQ SDMEVLGWLLAAYRFGRYSETGAMGARLARPEGLDTARLEILAQAETLTRDLINTPAN DMGPPDLEAAAQDLAQQHGASIEVVLGDDLLAQDFPLIHTVGRAADRAPRLIDMKWGD RGPKITLVGKGVCFDTGGLNLKPGASMGLMKKDMGGAANVLGLAHMIMALQPRISLRV LIPAVENSVAGNAFRPGDILPSRKGLSVEINNTDAEGRLVLADALAYAQEDAPDLIIS MATLTGAARVAVGPDLAPYYCDDPDFVTALENAATHQCDPVWRMPFHTPYESMIEPGI ADLDNAPKGGFAGSITAALFLRRFVDESVYAHFDVYGWNPSDAPGRPKGGAGQATRAL LGVIEAMQTS" gene 303571..304365 /locus_tag="RD1_0315" /db_xref="GeneID:4195507" CDS 303571..304365 /locus_tag="RD1_0315" /codon_start=1 /transl_table=11 /product="NlpC/P60 domain protein" /protein_id="YP_680725.1" /db_xref="GI:110677718" /db_xref="GeneID:4195507" /translation="MTDRRVTPDPTHVTLDIPAQVTGPIADLRQSPAGPRDRQVLFGD RAAILGRMEGHSLIRAQKDGYCGWVSDAALGPVHPVTHRVTSRATHVYAEANFKSPDL MHLGFSAGLNVVAETATFVETPQGFIPRQHVRPTEARATDPATIAELFLGVPYLWGGN AHLGIDCSGLVQAACLACGIACPGDSDQQAEQLGVALPSGAALQRNDVIFWKGHVALV LDKDTLIHANAGHMLVTTEPIADALARIEMQGDGVPTGFKRLEMPT" gene complement(304378..304725) /locus_tag="RD1_0316" /db_xref="GeneID:4195508" CDS complement(304378..304725) /locus_tag="RD1_0316" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680726.1" /db_xref="GI:110677719" /db_xref="GeneID:4195508" /translation="MNYQVPPTSTLHQMPPSQVAFHRTELSVILSLYGRFVAAGEWRD YGISCLKDVAVFSVFRRTAETPLYRIEKRPRLRDKQGMYAVVGMDGQIIRRGHDLKKV LRVLERKLIRAVE" gene complement(304795..306456) /locus_tag="RD1_0317" /db_xref="GeneID:4195509" CDS complement(304795..306456) /locus_tag="RD1_0317" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680727.1" /db_xref="GI:110677720" /db_xref="GeneID:4195509" /translation="MKTRRILSIWFPHFGADRLMRRNPQLATVPLGVVEEQHNSQVLT SLNAAAAQAGLRVGQPVRDAHAMCEKLVTRARSQPAEAAFLTALQRWAGKFSPWVAPE GHDALVIDLTGCAHLFGGEESLLQVVQQDCEDLGLSVRMGLADTRGAAWALARFAGQS AGSHRTGDAIDQEARATRSRASKRRRWTKGGAAPVVTPGPAAGAHQISAPGQTYCALS PLPVAALRLDTEITAQLSRLGIRRIGDLLGQPRAVLARRFGRGLVMRMDQAMGSAPEP VSPARAPAHFAVRMTLPDPIGLESDLLAGLDRLLPRLCENLEKKGRGARRVLFQAYRT DHDIQSVEVGLARAARDPAQIKPLIALKLGSIDAGFGIDMLRLEAVQTEPIHARTPVG HLEAGAVVSTRLASNTSMDDLIGRIGARVGLEAITRLKPASSHIPEKTSTLHAAAWST PFDGQWPDPPNPRPLLIWQPEPVQAPDSPKLPDVFLWRGQRLRAVRAIGPERIAPEWW LDDPNWRSGVRDYWSTETEDGQRLWLFYAHGHLMSSGWFCHGSYA" gene complement(306540..307157) /locus_tag="RD1_0318" /db_xref="GeneID:4195510" CDS complement(306540..307157) /locus_tag="RD1_0318" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family, putative" /protein_id="YP_680728.1" /db_xref="GI:110677721" /db_xref="GeneID:4195510" /translation="MTVATLAIRKGRKFDQVLDGARDVFMADGFEGASVDEIARVANV SKATLYSYFPDKRLLFMEVATAECQRQARGAMDKIDMEAAPQDVLAQTGQHFLRFITS DFGQKIFRICVAESERFPDLGQKFYNSGPAVFRTEMAAYFKQAEARGQLRMSDHLMAA DQFGELCKSDVWPRLIFGVIDKVSEAEIIRVVDSAVETFMARYGT" gene 307438..308367 /locus_tag="RD1_0319" /db_xref="GeneID:4195511" CDS 307438..308367 /locus_tag="RD1_0319" /codon_start=1 /transl_table=11 /product="auxin efflux carrier family protein, putative" /protein_id="YP_680729.1" /db_xref="GI:110677722" /db_xref="GeneID:4195511" /translation="MIEIFFKTVPFFALIGLGYWAGRIRFFTEEATAYLTKFVFYFAL SAMLFRFSANLSFADVWDTNLVSGYLLGTVAVYLIATIVGMIRRLDVATVAVEAQCAA IGNVGFLGIPMLALLLGEAAIGVIMMALAVDLIVFSSLIVILITGSRDGRFSLRILRT IALGLVKNPMILAITSGLLWSALAIPIPTPMNDFLTILGGAATPGALFAIGASLASKS AERLVIAGWLSFCKLVLHPLFVAIGVIILFPVDPYTAAVVISASALPVAGNVYILAQH YGVASHRVSAAILVSTAISIVSVSFVIGLVAPL" gene 308437..309267 /gene="fghA" /locus_tag="RD1_0320" /db_xref="GeneID:4195512" CDS 308437..309267 /gene="fghA" /locus_tag="RD1_0320" /EC_number="3.1.2.12" /codon_start=1 /transl_table=11 /product="S-formylglutathione hydrolase, putative" /protein_id="YP_680730.1" /db_xref="GI:110677723" /db_xref="GeneID:4195512" /translation="METISENACFGGTQGVYSHTSASCNCDMTFGLFLPEEAQDGPVP LLWFLSGLTCTHENAMIKAGAQSWAAEHGIALVFPDTSPRGEGVADDDAYDLGQGAGF YVNATQAPWSSHFKMWDYVTEELPNLLEQNFALDMKRQAITGHSMGGHGALTIAMSLP GRFRSVSAFAPISHPTASDWGRKQLSAYLGDDQSTWAPHDSTLLMREKGFDGPMLVDT GTKDQFIDLLQPEALAEAVNTRRQQAVLRLQPGYDHSYFFIATFMEEHIAFHADALYA " gene 309264..309719 /locus_tag="RD1_0321" /db_xref="GeneID:4195513" CDS 309264..309719 /locus_tag="RD1_0321" /codon_start=1 /transl_table=11 /product="YaiI/YqxD family protein, putative" /protein_id="YP_680731.1" /db_xref="GI:110677724" /db_xref="GeneID:4195513" /translation="MTALYIDADACPVKSEAERVATRHRVKMYIVSNGGLRPSQNPLV ETVIVPDGPDVADMWIADRCGTGDVVVTGDIPLAAKCIEAGALVLKHNGEALTSANIG NVLASRDLMADLRAADPFRQGGGKSFGKADRSRFLDGLERTLRKAATLG" gene 309740..310372 /locus_tag="RD1_0322" /db_xref="GeneID:4195514" CDS 309740..310372 /locus_tag="RD1_0322" /codon_start=1 /transl_table=11 /product="hydrolase, putative" /protein_id="YP_680732.1" /db_xref="GI:110677725" /db_xref="GeneID:4195514" /translation="MSDNPTPQAVIFDVGNVLIEWDPDRFYDGAIGEDRRRAMFEALD LHAMNERIDLGAHFTDTVYAEAEKYPDWRAEIRMWHDRWIEMASPVIDHSVRLMKALQ DKGVPVFSLTNFGVESYDLAATHYPFLRAFDRDFISGHMRMIKPDPAIYAQVEATAGI KGDALLFTDDRDDNIAAAQGFGWQTHLFEGPQGWADRLVASGLLTRAEAA" gene 310369..311292 /locus_tag="RD1_0323" /db_xref="GeneID:4195515" CDS 310369..311292 /locus_tag="RD1_0323" /codon_start=1 /transl_table=11 /product="ornithine cyclodeaminase, putative" /protein_id="YP_680733.1" /db_xref="GI:110677726" /db_xref="GeneID:4195515" /translation="MSPIPIIPFSEGEAVLDWIGLTDALAAGHLLPKAEIADTFLYRD PDTLLNRAAWIDGLGLAVKSATIFPGNTAQGLSSVNGGVTLYCDRTGTLEAIVDFHLV TKWKTAGDSLLAARRLARADSRTILIVGAGTQARALHSAYSALFPHAQFTVWNRTAQN AEQLAREIPGIAIAEDLETAVRAADIVTAATMTTTPLIHGAWLQPGQHIDLIGAYRPD MREVDDDALQRTRVFVDSLDTTVDHIGELKIPIAAGAFSADQIVADYYAPESFKRQGD DEITLFKNGGGAHLDLMTSRFILERWQAQSA" gene 311289..312212 /locus_tag="RD1_0324" /db_xref="GeneID:4195516" CDS 311289..312212 /locus_tag="RD1_0324" /codon_start=1 /transl_table=11 /product="alpha/beta hydrolase, putative" /protein_id="YP_680734.1" /db_xref="GI:110677727" /db_xref="GeneID:4195516" /translation="MIWALLLLAGIAAAPFVIEALRRPMNAAARKSAPGAFVDLSQGV THYQWSGPAEGPVIVCIHGLTTPSFVWQALRPALERRGFRILSYDLYGRGYSDRPKGV QNPAFFLQQLNDLLASQDVRTDVTVVGYSMGGTIATLFAADRPQDIRQMVLLAPAGMR PVGSGLFKAAVQNAVLGRWVMLALYPSILRKGLRAEAHVPSSVPGINALQHAELTWRG FVPAVHSSLLGMLSDGLAAEHASLAQRKVPVMAIWGAADDVIPLAAKDQLAEWNPNAQ QQVIPDAGHGLTYTHCDEIDALLAPFLAKDA" gene complement(312209..313501) /locus_tag="RD1_0325" /db_xref="GeneID:4195517" CDS complement(312209..313501) /locus_tag="RD1_0325" /codon_start=1 /transl_table=11 /product="transmembrane transporter, major facilitator family, putative" /protein_id="YP_680735.1" /db_xref="GI:110677728" /db_xref="GeneID:4195517" /translation="MTFRSEIVVCPHIKDHILPKSAPLFTPVLIVGCAIIIVSFAIRS TFGVFQIPIADEFGWLRAEFSLAIAIQNLAWGIGQPLFGALAEKIGDRKSIVLGAVIY ALGLLLSAGASTPIEHQLYAWLLGFGIAGTGFGVILAVVGRASSAENRSMSLAIVSAA GSGGQIFGPPIAEWLLSFMSWQATFVVFAIAILAILLTLPMMRAPAMATKTDLEESLK EILGKAFRDPSFTFIYLGFFSCGYQLGFITAHLPAFVTELCGPIMPGGMLDNMGISTT SALGAVAISLIGLANIAGTLLAGWAGKYYSKKYLLAGIYTARTVVGALFIMFPITPTS VILFSLAMGSLWLATIPLTSGLIAHIYGLRYMGTLYGIVFLSHQLGGFLGIWLGGRMY DVYGDYTLVWWIGLAVGAFSAIIHLPIRERRLEGLQTV" gene 313515..314642 /locus_tag="RD1_0326" /db_xref="GeneID:4195518" CDS 313515..314642 /locus_tag="RD1_0326" /codon_start=1 /transl_table=11 /product="ATPase, AFG1 family protein" /protein_id="YP_680736.1" /db_xref="GI:110677729" /db_xref="GeneID:4195518" /translation="MPAAQSLICAASFLAQPQSLLGIMTSLSQHYMSLTQDGTLIADP AQIAALPEFERVHDALLQPVKKGLFRKVPEPPKGVYFWGGVGRGKSMLMDLFVEHLDG IPARRVHFHAFMQEIHAAMHEVRKSGVEDAISPVAADVAASVRLLAFDEMQISDITDA MIVGRLFEALFNAGVVVITTSNRHPDELYKNGLNRDLFLPFIALIKERMVIHELVSPT DYRQDRLGGQQVYFTPVNSDARKAMDAVWDDLAGGAGTPLVLKVKGRDVEIPAFRNSV ARAGFHDLCGKPLGPADYLTLAEAVKVLMIDGIPTLSRSNFNEAKRFVTLIDALYEAK VRLICSAAAKPEMLYVEGEGTFEFERTASRLREMQGSDWGQ" gene complement(314648..315922) /gene="folC" /locus_tag="RD1_0327" /db_xref="GeneID:4195519" CDS complement(314648..315922) /gene="folC" /locus_tag="RD1_0327" /EC_number="6.3.2.12" /EC_number="6.3.2.17" /codon_start=1 /transl_table=11 /product="folC bifunctional protein" /protein_id="YP_680737.1" /db_xref="GI:110677730" /db_xref="GeneID:4195519" /translation="MNSTSSDVILERMMALHPKVIDLTLDRVWRLLDALGNPQRNLPP VIHIAGTNGKGSTQAMIRAGLEAAGKSVHAYTSPHLARFHERIRVAGDLISEADLTAV LDECYAANGGGDITYFEITTCAALLAFSRTPADFTLLEVGLGGRLDATNVVDDPVLTM ITPVSMDHEQFLGDTLRKIAFEKAGIIKPGVPCIVSRQADDGMEVIEEVAQRHAAPLL AYGQQWHVGPDRDRISYQDDAGLLDLPMPNLPGAHQIMNAGAALTALRYLGFDEHVAE AAVTTAFWPARMQRLKTGPLTDAAPQAELWLDGGHNPAAGEALAAHLHSLPERPTHLI CGMLNTKDIDGYLRPLAAVTQDLTAVSIPGEASTLPAEATAEAARNVGFSADVADDVG AALAKIVATTPQARVLICGSLYLAGAILRENG" gene complement(315919..316863) /gene="accD" /locus_tag="RD1_0328" /db_xref="GeneID:4198020" CDS complement(315919..316863) /gene="accD" /locus_tag="RD1_0328" /EC_number="6.4.1.2" /codon_start=1 /transl_table=11 /product="acetyl-CoA carboxylase, carboxyl transferase, beta subunit" /protein_id="YP_680738.1" /db_xref="GI:110677731" /db_xref="GeneID:4198020" /translation="MNWITNYVRPRINSIFSRRETPDNLWTKCPECGTMLFHREVSDN LNVCTNCDHHMNITARDRLTALFDGGIFTEVDVTPPTADPLGFRDQKKYPDRLKAAQK ETSEVEAMLVGCGEIGRTPIVAAAQDFSFMAGSMGMYVGNAIIAAAQEAVRLKRPLIL FSAAGGARMQEGILSLMQMPRTTVAVQMLKEAGLPYIVVLTHPTTGGVTASYAMLGDV HIAEPNALICFAGPRVIEQTIREKLPEGFQRAEYLLDHGMLDRVTHRTKMRDELITIT RMLLGLPPAVRGDLPAPQPDDAAPTQDATETPVDTAEK" gene complement(316922..317821) /locus_tag="RD1_0329" /db_xref="GeneID:4198021" CDS complement(316922..317821) /locus_tag="RD1_0329" /codon_start=1 /transl_table=11 /product="CAAX amino terminal protease family protein, putative" /protein_id="YP_680739.1" /db_xref="GI:110677732" /db_xref="GeneID:4198021" /translation="MSLFRAYRAHEALVAPARPKAQVWRLIIGVILIAGVFLLANQFL HQSLFTLLGSETYGALTGQDGRMSQLSVVFLLLSFGLLAVAVMVALKVAHNRGITAVF GDAAAFRSQFVAVLLMLVILNAAVFALPPWDMGAPLVPNVTVGAWLVVLPFALVAIMV QVSAEEILFRGYLQQQLAARFKSPLTWLLVPSVLFGLGHYMPEEAGENADIIMVWSVI FGVLMADLTARAGTLAPAIAVHFVNNVVAILFVSMPDSLSGLSLYLSPFALTDTEELR AWLPVEFAMMVVTWLAARLAIRR" gene complement(317831..318001) /locus_tag="RD1_0330" /db_xref="GeneID:4198022" CDS complement(317831..318001) /locus_tag="RD1_0330" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680740.1" /db_xref="GI:110677733" /db_xref="GeneID:4198022" /translation="MIGDDPDVLMSLLKTVASHLSGAAEVLRASGVSIREVAEEQRAA GRAAPQPSKAME" gene complement(318011..320953) /locus_tag="RD1_0331" /db_xref="GeneID:4198023" CDS complement(318011..320953) /locus_tag="RD1_0331" /codon_start=1 /transl_table=11 /product="ABC transporter subunit, putative" /protein_id="YP_680741.1" /db_xref="GI:110677734" /db_xref="GeneID:4198023" /translation="MEPSIFSFIWKYSRRQQIVLLFFTIFTFPFLYATLELPKRIIND AIGATSSIVEIWDGIEVSQTEFLMILCGLYLLSVLVHGLLKMRLNTMKGVLAERLLRR FRYQLVGRMMRFPRAYFRSTSQGELVSMVTSEAEPMGGLMGDAVAQPVFQAGQMLIIV AFLFAQSVWFGLAGIALIPLQAWLIPMLQRQINQLNKKRIVEVRQFAAEIGETAAGVT DLRTNGGWRFRLAGFTDRLGRLFDIRFQIYQKKFFMKFLNNFITQLTPFFFYSVGGLL AIRGDITVGALVAALAAYKDLSSPWKELLTYYNQVQDMSLRWEIVVERFAPKGMIEES LFEGEPDDMPRLDGAISMKNVTVRNADGNAVLENINLEIPAGARVAVKSTNQSERIAF AELLTREVIPTRGDITIAGRRLNDLHQAVVAARIGYAHSRPYLFNGTLGDNLFMPLKT SPKTVLWDPKHKDKAAIEAQRAGNSPDSTKADWLDPQLAGLNTADEIRGWWFHLVEAM GTDDIMFRRMLDARMDPEKHPQLAQQLVDLRDEVQVRLQERGLASMVNRFDPDEFNPS IPLGGNLMFAAPRRHITQESLASEANFLRLFTEIGLAEQGIAISQTLIETLHQTFGMD GTSHPLFTALGIEEELYEKLVDIAMRRKDRGDQAISEDEFALLLTVPFAFTAEQIGPG FPESFKKEIVEIRKTKSEEIRNRLKDLFVPVAPENYLPRMTLMENVLYGRVAGIAGVQ GELIEDIVADVLAEKGLKRLVAETVLDVPTGLGGANMANIFQERAAFSRAGIKRPDVL ILDTVLASHDAASRQRTRARLQELLPKTTMIFLEDNFENPQAYDLHIEIKNGRIDGED DVEEVEDDASGSDDLRRKIRVISRTELFADLEARSQRLLAFAAQWYDAPKGKRIFSMG ERADAVYLCLSGTAMMSYVDNNGTRQDVTAVEPGRLIGDLAIILDEPRQLDLIAQTDS QFLRIGAE" gene 321157..322920 /gene="ilvD" /locus_tag="RD1_0332" /db_xref="GeneID:4198024" CDS 321157..322920 /gene="ilvD" /locus_tag="RD1_0332" /EC_number="4.2.1.9" /note="catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis" /codon_start=1 /transl_table=11 /product="dihydroxy-acid dehydratase" /protein_id="YP_680742.1" /db_xref="GI:110677735" /db_xref="GeneID:4198024" /translation="MSSQRFDKSKLPSRHVTEGPSRAPHRSYYYAMGMTEEEIHQPLV GVATCWNEAAPCNIALNRQAQSVKMGVKRESGTPREFTTITVTDGIAMGHEGMRSSLA SREAIADTVELTMRGHCYDALVGLAGCDKSLPGMMMAMIRLNVPSVFLYGGSILPGRA PKGASVPAEYADRDLTVQDMFEAVGHQQNGTLSEAELEVLERVACPSAGACGGQFTAN TMACVSEAIGLALPNSAGAPAPYESRDAYAEASGAAVMNLIEKNIRARDICTREAFEN AARIVACTGGSTNAGLHLPAMAHEAGIDFFLEDVCEIFRDTPYFVDLKPGGQYVAKDM YEAGGVPVVMKELRKAGLLHEDCMTVTGYSIGEELDKVSLEADGRVVYPIETPLSKTG GVVGLKGNLAPEGAIVKIAGMEPQHLLFTGPARIFECEQDAFEAVQNRTYKEGDVFVI RNEGPAGGPGMREMLATTAALSGQGMGKKVALITDGRFSGATRGFCVGHVGPEAAHGG PIALLKDGDMITLNAIEGTITVDVSDEEMAERKANWKGARPTIYGAGALWKYAQLVGP TYLGAVTHPGGKDEGHAYMEL" gene complement(323220..324560) /gene="ctpA" /locus_tag="RD1_0333" /db_xref="GeneID:4198025" CDS complement(323220..324560) /gene="ctpA" /locus_tag="RD1_0333" /EC_number="3.4.21.-" /codon_start=1 /transl_table=11 /product="carboxyl-terminal protease family protein, putative" /protein_id="YP_680743.1" /db_xref="GI:110677736" /db_xref="GeneID:4198025" /translation="MKKFAMAALGGTLAGVVATTQIAGPLLAQDSARSSNVYEQLDLF GDIFERIRAQYVEEVDPGELIEAAIDGMLTSLDPHSSYLSPDDAAQMRVQTRGEFGGL GIEVTQEEGFVKVVSPIDGTPADEAGVEAGDFITHVDGESVLGLSLDEAVTMMRGPVG SEIIITLVREGEPEPFDVSIIRDTIKLTAVRTRTEGDTVVLRVTTFNDQTYTNLQSGL EEQIAEAGGIDEINGIVIDLRNNPGGLLTQAIRVSDAFLEKGEIVSTRGREIQDGERF NATAGDLAQGKPIVVLINGGSASASEIVAGALQDHRRAIVVGTKSFGKGSVQTVMPLR SDGAMRLTTARYYTPSGRSIQSLGVSPDIVVEQPRRSLADEEEDESTNRPSRSEADLR GSLNNDSLSEDEIKQIEADRAKAEAAAALREEDYQLAYAIDILKGLSAIGTSNR" gene complement(324567..325709) /locus_tag="RD1_0334" /db_xref="GeneID:4198026" CDS complement(324567..325709) /locus_tag="RD1_0334" /codon_start=1 /transl_table=11 /product="M23 peptidase domain protein, putative" /protein_id="YP_680744.1" /db_xref="GI:110677737" /db_xref="GeneID:4198026" /translation="MPHFIKLLALLTALLLPALAVAQTAPAERARLAVQMLDEASEKL ETAQSARDRVRALSETVIAFEEGLGALRSGLRQATAREAQLSAQLIAQEREIASLLAV LQRVGGASSPVILLHPGGPTGAARAGMLVAEVTPALSAKAAEVRRDLEEMQALAALQT DASARLEAALQQVQDARAALNQAMAERTELPKRFVSDPVNEAILIDTAETLDDFAAGL DRVILEEIAIVPPDLVGEKGALDLPVRGHLLRASGAADAAGIRRPGIILATRPAALVT SPVPATLRYVGPLLDFGQVVILEPQADVLFVFAGLETVYGAAGDVIEADAPLGLMGGV DDKIAAELSTDGDQTGTGRSETLYIEVRVNNTPEDPSDWFRTYKDG" gene complement(325694..327211) /gene="gpmI" /locus_tag="RD1_0335" /db_xref="GeneID:4198027" CDS complement(325694..327211) /gene="gpmI" /locus_tag="RD1_0335" /EC_number="5.4.2.1" /note="catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate" /codon_start=1 /transl_table=11 /product="phosphoglyceromutase" /protein_id="YP_680745.1" /db_xref="GI:110677738" /db_xref="GeneID:4198027" /translation="MTRPKPVALCILDGWGLSERREGNAPLLADTPNMDRLMATCPHA TLTTFGPDVGLPSGQMGNSEVGHTNIGAGRVVAMDLGQIDLAIEEGLFAQNSRLRAFI VTLQDSGGTAHLMGVVSDGGVHGHINHMIAAAKALADENIPVVIHALTDGRDVAPRSA LGYFETLQAALPDGVEIATVTGRYFAMDRDNRWDRVSKAYQAIVTGTGRKAASASDAV DQAYGQGENDEFISPTVLGGYTGAKDNDGFFCLNFRADRAREIMAAIGDPDFTAFETG ARPKWASLMGMAQYSEAHANYMTTMYPKPEIVNTLGDWVAQQGLRQYRLAETEKYPHV TFFLNGGEEVSFDGEDRLMPKSPDVATYDLQPEMSSKEVTDAFVAAIEEGYDLIVVNY ANPDMVGHTGDLQAAMKACEAVDQGLGRVLAALEKAGGAMIVTADHGNCDVMIDPETG GPHTAHTLNPVPVVVVGAPDGATLRDGRLADLAPTILHLMGLESPKEMTGKCLIS" gene complement(327286..330261) /gene="dnaE" /locus_tag="RD1_0336" /db_xref="GeneID:4198028" CDS complement(327286..330261) /gene="dnaE" /locus_tag="RD1_0336" /EC_number="2.7.7.7" /codon_start=1 /transl_table=11 /product="DNA polymerase III, alpha subunit" /protein_id="YP_680746.1" /db_xref="GI:110677739" /db_xref="GeneID:4198028" /translation="MFAELNITSNFSFLKGASHPEEYMSRAAALGIEAIAIADENTVA GIVRAYAQARDIARQVRERQAWEAANDQIGPALPAGLRVAPATLYATPRLIPAARLVF ADACDITALPENRAGWGALCRLLSTGRQRAEKGACDLRQQDLLEGGCGLQLILWPQAQ GVPCGAGGWVQTARQLTHRFGGKIHIGLFPQYDGRDPQRFADLTEQARRLGLPTVASA APVMHHGARRKLADVVTAIRAGCRVDDLGRDALPNSEARLRSEAEMRRLFKGFDSAVD RAHTLAQSLQFSLDELRYEYPSEIAENETPSGRLRRLAYEGLAWRYPAGASDKVHRLL EHELTLIGKLKYEPYFLTVRDIVAFARSRDILCQGRGSAANSVVCYCLGVTSVSPEIG TMVFERFVSEARNEPPDIDVDFEHERREEVIQHIYERYGRHRAGLCATVVHYRVKRAI REVGRAMGLSEDTISALSSQLWGFFSTKGIEAERMAEIGLDANDRRLQQTLALVHEIN GFPRHLSQHVGGFVITEGRLDELVPIENATMEGRTVICWDKDDIEALGILKVDVLSLG MLTCIRKAFDLMQMHHNVSHTLASLPPEDPAVYDMLCRADSIGVFQVESRAQMNFLPR MRPRCFYDLVIEVAIIRPGPIQGDMVHPYIRRRNGEEEVSFPSDELGEVLGKTLGVPL FQEQAMQIAIVGAGFTPDQADRLRRSLATFKKHGNVSEFKNLFLRGMKRKGYDDDFAE RCFSQIEGFGSYGFPESHAASFALLVYASSWIKCHHPGIFACALLNSQPMGFYAPAQI VRDAREHGVDVRPICINASFWDNVMEPDGRGGLALRLGFRQIKGISEEDATWLTAARG NGYRSVRDVWRRAGLQPVMIERLAEADVFAALDLNRRAALWEAKALVPGAPLPLFAGD IDGEAIDEPAALLPEMTLGEEVVEDYVAMRLTLRAHPMALLRHRLTPQPGASPAPLAP AEGKAPDLSKLSYTRGNPD" gene 330297..330443 /locus_tag="RD1_0338" /db_xref="GeneID:4198029" CDS 330297..330443 /locus_tag="RD1_0338" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680747.1" /db_xref="GI:110677740" /db_xref="GeneID:4198029" /translation="MESHLRATKTDFIKKNDARPVRPMQVSAITWFDNSEKSDAMISM GYVG" gene 331353..333293 /locus_tag="RD1_0339" /db_xref="GeneID:4198030" CDS 331353..333293 /locus_tag="RD1_0339" /codon_start=1 /transl_table=11 /product="transposase, putative" /protein_id="YP_680748.1" /db_xref="GI:110677741" /db_xref="GeneID:4198030" /translation="MNLSVTSIVGLPGMPTTTFGTRKWLKCRNVAHEKQGKRFVFNLC DLPEDIRTAYLTRQIELAGLDTGTYDEAAHDQLRAAPASMQTAAERRAAITRLLVKLG DSVSWKDRRALVCKEFGTKGNSIQSLKRLFKEVENTDPINFAPALLQGHKGRTVKADI ADELWELWLGIIQKSAPSHALTAVYDDVQLIADKKGLAWPSYPTILRRWNALPEIERT TLRHGGKHAAKELYQPQRRSVAKVQAMQVVEMDGRTLDIWAEFEDGTIARPTMIALVD RASFKGLHFVIGKGETALLTRDLILETCDRYGIFDQLLTDNSRSFSGLLVAGGVKHKF RNSGSRLPEWEPPGVCEHLGIELKFTLPHNPGAKIPESKFAKWSRRIDTRPEFAGAHS GHNPLDKPNGNETPVPIALVREIYAREMARDNAKAGRRTQNARKGESYDQTFNRLLQS RIHRPMQPKQRWRASLLYQVRTVDRLGQIRVNGWVYGKDSLDGSQERLLPYAGLPVLI GTDPSNYAAPAIAFDMDTRREIMAGIQPDLEGDYMDQDGAREASKERARLRKITREIE TRHSRDLSDFYADLNDGRDLGCLDDPARANVVKPNFKDPIRAKANAKSEATERAERQE FLVRMKAEQNERKASGGTRQPF" gene 333253..334092 /locus_tag="RD1_0340" /db_xref="GeneID:4198031" CDS 333253..334092 /locus_tag="RD1_0340" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680749.1" /db_xref="GI:110677742" /db_xref="GeneID:4198031" /translation="MNERPAVAPASLSECHQTLAKDHDNMRETIQPIDTTVYTTLDWQ VRNLLKTAGLGIARGPVGIGKSYSINRLHDELEAEGVKVILATCAPSTEGSYQAFVKT ILAERNVYHTGIVDCMEAFETLIMGNPHGYIPQPSILIVDECQGMRAPVLTMLRQLWD IGDPARLNGKGTAFAMLLCGNNTFLNRSGIVREMDLHPLRDRLTMKVRLDAPDTAELD SIAQSFCPHDANALAELRKYGRKRSNVRAIAQAYRMAGTLSGAAPVSAQNVRDAIKMM EGV" gene 334092..334430 /locus_tag="RD1_0341" /db_xref="GeneID:4198032" CDS 334092..334430 /locus_tag="RD1_0341" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680750.1" /db_xref="GI:110677743" /db_xref="GeneID:4198032" /translation="MPEVIISIPMSDEEAQKTVGKQIMVLFVSDDQRAAISATMGQTH EFLSLTHQNLNTLGEIAETRGAGETDLTKTIGQLRDPSRKVLGAFEGLMKFLGQAHFI KPGSNGERLQ" gene 334427..334750 /locus_tag="RD1_0342" /db_xref="GeneID:4198033" CDS 334427..334750 /locus_tag="RD1_0342" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680751.1" /db_xref="GI:110677744" /db_xref="GeneID:4198033" /translation="MNVSTHHVAVAVPADKLAALYDAMNESPYYLVRAAEVLRLISAA IHDVTSDEDNAPPEIWKYAGTAELCAIGLEQIMHQHGELLIVMSSQVREAINFNDHIG QGQDQ" gene 334747..335157 /locus_tag="RD1_0343" /db_xref="GeneID:4198034" CDS 334747..335157 /locus_tag="RD1_0343" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680752.1" /db_xref="GI:110677745" /db_xref="GeneID:4198034" /translation="MKLTNKQMALLHVAKSKLDLSEHQYRATLVQIAEVTSATELDQD GFDAIMGFFEYLGFTPLTPRAKDYGTRPGMASFAQIELILALWHEYTGGKAGEAELNK WLLRTWKISSLRFLSKAMAPKAITALKSMKARAA" gene 335490..336506 /locus_tag="RD1_0344" /db_xref="GeneID:4198035" CDS 335490..336506 /locus_tag="RD1_0344" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680753.1" /db_xref="GI:110677746" /db_xref="GeneID:4198035" /translation="MLHGPPQEACGCTDFRHFPRLLVFARNASDRLNITSGNCTLFLD TKTLELVFKGFQTVYSDAYLKATVHWDKIAMQVPSASAEETYGWLGDFPQIREWLGSR IVNGLEAHSFKILNREFESTVSVGRSHLADDKLGIFKPAFSEMGHLARNHPEELIFNL LASGFDTPCYDGQNFFDTDHQIKAPDGSSTSVSNMQDGSGPAWFLLDTSRAVRPIIWQ ERESYKFEALDRPGDYNAFFHNEYIYGVRARVNAGFGLWQLAYGSKDILGSDNYAAAR AAMMGFRSDGGRILGVKPMMLVVPPELEERALQIVNTEFSTGGGTNPWRGTAELIVTP FLAG" gene 336530..337429 /locus_tag="RD1_0345" /db_xref="GeneID:4198036" CDS 336530..337429 /locus_tag="RD1_0345" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680754.1" /db_xref="GI:110677747" /db_xref="GeneID:4198036" /translation="MQAAPLAAEAPEWVHLMPSGAISGRDGRSYTVSNPDALVAAFHA RGVDLPIDYEHQSETHKETRVGPVPVAGWIKDMKARADGIWGRVEWTAAARDLISQKA YRYLSPVMMHRKDDKEVLRLKGAGLVHHPNLTLTALASQEDTMDDTRPFMHKIAKRLG LADGASEDEIMQTLEDALGKTPDPEKYVPIAAMQSLMDDRAQTATAMSESRALAKVED ALEKGHITPGMKDWATSLCRQNEASFDAFLERSGKVFSKLLEPTHTTAHPPSVQTSTA RAESEMAVSICRQLGLEETALNS" gene 337614..337979 /locus_tag="RD1_0346" /db_xref="GeneID:4198037" CDS 337614..337979 /locus_tag="RD1_0346" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680755.1" /db_xref="GI:110677748" /db_xref="GeneID:4198037" /translation="MSEIQPLCPLPPAHVATYVNAMGVETAIEFLLNFGGAEIHLTTK PSRGGMVERVIGYEKTKRLVEVSINSKHRVPLANKWLAQCLYCQGLSIAAIARRVRRS DTTVRKYLRGTNTPRSMKR" gene 337985..338479 /locus_tag="RD1_0348" /db_xref="GeneID:4198038" CDS 337985..338479 /locus_tag="RD1_0348" /codon_start=1 /transl_table=11 /product="phage virion morphogenesis protein, putative" /protein_id="YP_680756.1" /db_xref="GI:110677749" /db_xref="GeneID:4198038" /translation="MIEIQIDQDEIREALLDLGEKLNDMTPVFQNIGEALLASTEDRF REGVSPDGVPWAPKSQTTIDAYTAKGFAVDFRPLWGTNPKGTALRDSLFFQAGPDYAE IATGQAYSAAMQFGAQKGEFTKSGSASSVPWGDIPARPFLGVSDEDEHNILADLKEWL DVAT" gene 339313..342114 /gene="polA" /locus_tag="RD1_0349" /db_xref="GeneID:4198039" CDS 339313..342114 /gene="polA" /locus_tag="RD1_0349" /EC_number="2.7.7.7" /note="has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair" /codon_start=1 /transl_table=11 /product="DNA polymerase I" /protein_id="YP_680757.1" /db_xref="GI:110677750" /db_xref="GeneID:4198039" /translation="MTNTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSG FCNMLHRYVEGNTGPDAPTHVAVIFDKGSHTFRNDMYDLYKANRDAMPEDLRPQIPLT RRATEAFNIACKEKEGYEADDIIATLAVQARAAGGRCTIISSDKDLMQLVGDGVEMLD AMKNKRIDRDGVFEKFGVYPERVVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGDL DALLERAAEIKQPKRRQTLIDHADQIRLSRRLVLLDEATPLDFTLEDLEVRTPDPDQL MPFLAEMEFRTLTKRIADQLKVEMPEINDTPANAPAAPEIADVPFDKAGYSQVDSAEA LQGWIDQIYERGYVAVDTETTGLNEMTAELVGISLCVEPGTACYIPLIHKAAGSDDLF GSDDLAEGQMPLETALEMLKPVLEDESILKIGQNMKYDAKVFAQVGITVAPIDDTMLM SYAMHGGLHGHGMDALSERYLGHTPLPIKPLLGSGKSAITFDKVPLSEAVPYAAEDAD VTLRLWQQFKPALHRAQVTKVYETLERPMVAVLADMERAGIKVDRDTLSRMSNAFSQK MAALEDEVYTLVGRKFNVGSPKQLGEILFDEMGLQGGKKGKTGAYATGADVLEDLATE HELPRRILDWRQLSKLKSTYTDALQDHINPDTGRVHTSYSIAGASTGRLASTDPNLQN IPIRSEEGRRIREAFVAEEGKTLVALDYSQIELRILAHIADIPALKTAFDDGQDIHAM TASEMFDVPLDEMTPEIRRQAKAINFGVIYGISGFGLARNLRIPRSEAQGFIDRYFER FPGIRAYMDDTKAFAKEHGYVETLFGRRIHTPNIGAKGPQAGFAARAAINAPIQGTAA DVIRRAMIRMPAAIAELPAKMLLQVHDELLFEVDQGAQDALIEAARSVMESAADPVVH LDVKLTVDAGQGPNWAVAH" gene complement(342206..342967) /locus_tag="RD1_0350" /db_xref="GeneID:4198119" CDS complement(342206..342967) /locus_tag="RD1_0350" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680758.1" /db_xref="GI:110677751" /db_xref="GeneID:4198119" /translation="MPKLAANLSTLWAELPYLDRFEAAQAAGFEGVAVPLPYEMPAKE TQRAALRSGLPVVHICAPPPNYTGGERGFAAVPGLEKRFEYDLRRALRYCEALRVPVL HIIAGVASGAAARQTLVANLRHACDAAPDGIMLTLEPKAQADAFLSDFEVTAGVIRDV GAPNLGLQFHSQHAAALGGDAVSVFETYADLIRHIQLADTNGAAPGSGAMDFEALAAA ISRAQYAGWLVADYTVDGRTEEHLDWMALFQTQNV" gene complement(343043..343618) /locus_tag="RD1_0352" /db_xref="GeneID:4198120" CDS complement(343043..343618) /locus_tag="RD1_0352" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680759.1" /db_xref="GI:110677752" /db_xref="GeneID:4198120" /translation="MSGQKTVTPSAEGLAASINAAKTRGLPPVHLWNPPFCGDLDMRI ARDGTWFYEGTPIGRPGLVKLFSSILKKEAEDYFLVTPVEKVGITVDDAPFVAIDFEA RGSGTDQVLKFFTHVDDSAVASADLPIRVERDPKTGEPSPYVRVRSNLDALIDRKSFY RLVDLGAHHEGWFGLWSSGAFFPVIPSAELP" gene 343688..344695 /gene="moxR" /locus_tag="RD1_0353" /db_xref="GeneID:4198121" CDS 343688..344695 /gene="moxR" /locus_tag="RD1_0353" /codon_start=1 /transl_table=11 /product="methanol dehydrogenase regulator moxR, putative" /protein_id="YP_680760.1" /db_xref="GI:110677753" /db_xref="GeneID:4198121" /translation="MSEAEDLVAEIEALGEKLAQAKSSITKRFIGQERVVELTLTALL CGGHGLLIGLPGLGKTRLVETLSTVMGLHGNRVQFTPDLMPADILGSEVLDTASDGSR AFRFIEGPIFCQLLMADEINRASPRTQSALLQAMQEKTVTVAGENRTLGTPFHVLATQ NPIEQEGTYPLPEAQLDRFLVQIDVAYPDRDTERDILLATTGEVEEASTEVFSAADLL AAQKLLRRMPVGESVVEMILDLVRAFRPEEDSASQQVRETVAWGPGPRAAQALMLTVR AKALLEGRLAPSAEDVIDMARPVLSHRMALNFAARARGDSLTDLIESTAVTLSGTKAA A" gene 344692..345597 /locus_tag="RD1_0354" /db_xref="GeneID:4198122" CDS 344692..345597 /locus_tag="RD1_0354" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680761.1" /db_xref="GI:110677754" /db_xref="GeneID:4198122" /translation="MSSLSSLPQDARPTALRASAETQAAMLPALLARAEHLAGAVLLG DHGRRRAGMGDDFWQYRPAQPGDSRRLIDHRRSAMGDTQFVREREWQIAQSVMLWVDQ GASMRFSSASDVPEKADRARVLALAIAILLVRGGERVGLTGTTLPPRRGNAQILRLAE MFTKDAEEDYAPPEHRAMIPSARAVFISDFMGDVAEVKLALTKAADRGVRGVLLHVLD PSEEEFPFSGRTIFESVGGTISHETLKANDLRTRYLDRLAARKEELQHLCTVTGWQYG QHHTNMSAQSALLWLYSALDTGGFR" gene 345594..348371 /locus_tag="RD1_0355" /db_xref="GeneID:4198123" CDS 345594..348371 /locus_tag="RD1_0355" /codon_start=1 /transl_table=11 /product="N-terminal double-transmembrane domain protein" /protein_id="YP_680762.1" /db_xref="GI:110677755" /db_xref="GeneID:4198123" /translation="MTVLGGIGFTAPWLLLALLALPILWLILRAIPPAPIKRMFPGVA LLLGLQDDESVSDRTPWWLLLLRMLAVAAIILGLAGPVLNPNEDQAQGDGPLMIVLDG SWAGATRWDEQMEAIDAQLSRASRAARPVAFLDLARPEAPVFQAADTWRSRLPGFTPS GWQPDAARIAEATSLLNETGAFDTLWFSDGLDYPGRDEALAAFEAKGMVDVYQTAANV VALAPAGFEDGAIQLSALRATPGPEREVVLQVQGRDPVGNATLLATATATFQAGETNA DTALTLPAELRARITRFDIQGQRSAGATTLADDALRRREIALIAGREDREGLELLSPL HYLEQALAPSADLIKGSLSDILPANPDVIILADIATLSGGEAEDLGEWLDQGGMLVRF AGPRVAASDVSRVDEDPLMPVRLRTGGRTVGGAMSWGEPKTLAPFRENSPFFGLPIPD DVQVTSQIMAQPDPTLAERVIAELTDGTPLVTRKTREQGQIVLFHVTATADWSTLPLS GLFVQMLERLAVASSGTRPDATQLDGTTWTPEQVMDGFGTLSDAGNLPGVPGPDLVTA PPSPEMQPGIYASGDRRLARNVVTDETALEPAVWPARIPVRGFSVPPEQPIAGLLLSL ALLTLIADVIASLALTGRLKGAAGRTAAIVIALGIPLAIPSQSAAQSSELDEFALQST EEMVLAYVITSDQSVDDLSRAGLFGLSQTLTFRTSVEPASPVGVDLERDELAFFPILY WPITVEQPRPSSEAYAKLNAYLRSGGLILFDTKDADIARFGTSSPNGRKLRDLAAPLD IPPLEPLPADHVLTRTFYLLQDYPGRHTSRDVWVEAAPPDAEQIEGMPFRNLNDGVTP VVIGGNDWAAAWAMAENGAPLVPIGRGFTGERQRELAYRFGVNLVMHVLTGNYKSDQV HVPALLDRLGQ" gene 348368..350410 /locus_tag="RD1_0356" /db_xref="GeneID:4198124" CDS 348368..350410 /locus_tag="RD1_0356" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680763.1" /db_xref="GI:110677756" /db_xref="GeneID:4198124" /translation="MTGQMIFDPLIPWTLLAAIAVLAMAGVVFAALRGLSGWALRGLA ALVVIAALTGPSYQQEDRAELSDIVLLLEDESASQNLSDRAEQTQSAADELADRIAAR SNTEVRRITVTDGDGDTGTQLMTALSKALAEEPRSRVAGIIAVSDGRVHDADLPVNLP APMHLLMTGKSTDWDRRLSIKNAPAFAIIGEPVTLTLRIEDMGNAPAGATAAPLLISV DGAEPQEFQVPLGQDIDLPVTLPHGGRNVIEFTVPEADGELTDRNNKALIQMNGVRDR LRVLLVSGEPHPGGRTWRNLLKSDSSVDLVHFTILRPPEKQDGVPVSELSLIAFPTRE LFLEKIDDFDLIIFDRYKRRGILPALYLDNVANYIRQGGAVLVAAGPDFAGADSIYRS PLGPVLPASPTARVLDQPFRPTVTEIGNRHPVSTGLPGGGDWGPWLRHIDITDPRGNV VMAGAGDRPLLVLDRVGEGRVALLASDHAWLWNRGYEGGGPQLELLRRLAHWMMREPE LEEEALTADATGQTMRILRRTLQETVPPVVITDPLGNVTELPLLQSGPGVFETVFDGP EIGLYRLENGDQMAVIGLGPAAPREFEQTIATPDILAPVLAALRGGTVMLEDGLPRLR EVREGRPAAGRGWIGLTPRNAYETRDVRQTAILPGWLVLLLSAGLITAAWLREGRR" gene 350567..352768 /locus_tag="RD1_0357" /db_xref="GeneID:4198125" CDS 350567..352768 /locus_tag="RD1_0357" /EC_number="2.7.3.-" /codon_start=1 /transl_table=11 /product="hybrid sensory histidine kinase, putative" /protein_id="YP_680764.1" /db_xref="GI:110677757" /db_xref="GeneID:4198125" /translation="MLELKQAELFAANRKLGLHARQLSNEIVETRAEVANVRDENKRV KSDLSAAHKQIERVERRLWQSIETINDGFAFYSPDLELIMANNSYLAVFDGLEDMQPG VSYVTVLQFLTEEGIVNTGDLRPAEWRQKMIERVQSPEPEAVVIQLWNNEYIRMIDRR GPDGDIISLGINITAAVRYEEKLEAARASAEAASRAKSAFLANMSHEIRTPMNGVVGM ADVLTETPLSEEQRLYVDTIKNSGEALLVIINDVLDYSKIEAEKLQLHPEPFNLEKSI HEVLRLLQSIARDKGILLSVDYALFLSSDFIGDPGRLRQILTNLLGNAVKFTTEGSVT VRVSGKPDEATGKVILQIRVEDTGIGIPEDMIDHVFGEFNQVESERNRQFDGTGLGLA ITKKLIKMMNGQIWLTSEEGVGSCFGFEIALEPTGPVTLAHPALDPGLRHVMVVDDFP LNRDILQRQLEEIGLKVTACQDAATALAMLDSSVDLVMVDHIMADVNGLQFAQTARKA GHTQQIILLSSNHGYASKDPLSDSVDIIAQRPYLRSDLFGWLETVKPVSNNNAAPDKA DGAASPAVFSHRKTVSPSDAQPVEPTAPRKMRILAAEDNKTNRLVFGKMIKALDIELQ FANDGQEAVDAYPEFQPDLIFMDISMPRLDGKQATRAIREIEKSTSAHVPIIALTAHA MSGDDKDILEAGLDHYMTKPLRKNEIIGKIMDFRPSDAAHPCPDDMDQEAG" gene complement(352753..353532) /locus_tag="RD1_0358" /db_xref="GeneID:4198126" CDS complement(352753..353532) /locus_tag="RD1_0358" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680765.1" /db_xref="GI:110677758" /db_xref="GeneID:4198126" /translation="MLVVISPAKRLDWAERDVPVTQPDFQEDAVRLSKTARNLTLGSL KSLMGLSDDLARLNRDRFNAFAEDPAPEATRPAALAFAGDTYQGLEATSLDENERAWA QDHLRILSGLYGVLRPLDAIQPYRLEMGSRLKTRRGSNLYEYWRDDLSKALNAQAQSV GTDVLINCASQEYFGAVAPKALKLRVITPAFMEDKNDGKGPKIVSFFAKKARGAMARF VIQNRLSDPDALTGFDTGGYAYQPELSTPDKPVFIRPYPAS" gene complement(353567..355609) /gene="recQ" /locus_tag="RD1_0359" /db_xref="GeneID:4198127" CDS complement(353567..355609) /gene="recQ" /locus_tag="RD1_0359" /EC_number="3.6.1.-" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA helicase RecQ" /protein_id="YP_680766.1" /db_xref="GI:110677759" /db_xref="GeneID:4198127" /translation="MTGAPQMLRDVFGFDAFRPGQKEIVDAVTAGENVLAIMPTGGGK SLCFQLPAILRDGVTVVISPLIALMRDQVRALQEAGVAAGALTSGNTPEETDAVFDAL DQGRLKLLYMAPERLAAGSALGLLRRIGVSLIAVDEAHCVSQWGHDFRPDYLRIGELR RVLGVPLAAFTATADADTRTEIVRKLFDDTDPQIFLRGFDRPNIHLSFAAKDGPRRQI LDFAAARPGQSGIVYCGTRAKTESLSAALREAGRTSLHYHGGMEAEDRRIAERRFQQE DGLIVVATVAFGMGIDKPDIRWVAHADLPKSIEAYYQEIGRAGRDGAPAETLTLFGPD DIRLRRNQIDEGLAPPERRAADHARLNALLGLAEAMKCRRATLLGYFGETDITCGKCD LCDAPPETFDGTIAVRKALSAILRTDEWFGAGHLIDILLGISTDKIMQRGHDKLPTFG VGKEYDKRQWQAVFRQMMGHDLVRPDPARHGALKMTDAALPILRDQATIELRRDSIRN ASTRRPAVKSMVGEEDAPLLSALKAKRRAFAENAKVPAYIIFTDRTLIEMAENRPRTL DDLAGIGGVGAKKLERYGAAFLEVINGEAEHMHPNRRKLAGKTAGTVYDRLLEVQAVL ARGEAGQDKPLSCSSSQLAKLAQMHNADEKAVENLLGDRRAARFGSAFLDVLREAG" gene complement(355717..356004) /locus_tag="RD1_0360" /db_xref="GeneID:4198128" CDS complement(355717..356004) /locus_tag="RD1_0360" /codon_start=1 /transl_table=11 /product="YGGT family protein" /protein_id="YP_680767.1" /db_xref="GI:110677760" /db_xref="GeneID:4198128" /translation="MQSIFEILMLLLNVVWFFIIAHVIMSWLINFQVLNTQQSLVAQI WYGLNRLLEPIYGPVRRVLPQMGGIDLAPLAVLLIVAILRIVLVNNYALFI" gene 356161..357525 /locus_tag="RD1_0361" /db_xref="GeneID:4198129" CDS 356161..357525 /locus_tag="RD1_0361" /codon_start=1 /transl_table=11 /product="major Facilitator Superfamily (MFS) transporter, permease component, putative" /protein_id="YP_680768.1" /db_xref="GI:110677761" /db_xref="GeneID:4198129" /translation="MSSTRQRIWGWYFFDWASQPYNTLLLTFIFGPYFAQTATETLIA DGMAANAARAQAQAYWGYGLTAAGIAIAVLAPLLGSIADGSGRRMPWIVLFSTLYVVG AAGLWWTAPADFSILWALFFFGIGLIGMEFATIFTNSFLPELHPNSNERGRISGSGWA FGYLGGVVALAIMLVLFQAGDTGRTIAGLSPLFGLDPDTGADTRIVGPLTAAWFMVFI IPFFLHFRDIAPRHTPQNHLRIGLIGLRDTLVKLPRTPSLLAYLGSSMFYRDALNGLY TFGGIYALGVLGWSIMDIGIFGILAAISGAVFCWIGGHADRRIGPMPVIIFCCVTLIL TSGLILSLTPRSILGIALADGSAIPDVTFYIAGALIGAAGGALQSSSRTMMTHQANPD RMTEGFGLYALSGKATSFLAPASIAIVSDLTGSQRMGITPIVVLFILGLILLIWVKPK GDYA" gene 357522..358451 /gene="mepA" /locus_tag="RD1_0362" /db_xref="GeneID:4198130" CDS 357522..358451 /gene="mepA" /locus_tag="RD1_0362" /EC_number="3.4.-.-" /note="D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm" /codon_start=1 /transl_table=11 /product="penicillin-insensitive murein endopeptidase" /protein_id="YP_680769.1" /db_xref="GI:110677762" /db_xref="GeneID:4198130" /translation="MKTSHFILISVLAVGLMACSEQSAPPAQVAPLPTIGTSGHKDSL KPAKQLFGAKSAASQSPPAPFGSYAKGCVAGAAQLPETGPTWQAMRLSRNRNWAHPET VSFVKDLSRIAAQQPGWNGLYVGDLSQPRGGPMLSGHASHQIGLDADIWLRPATNLSL SVAERENISSISLRRNAGAFVNDNWTPQHAAILKAAASDPRVARIFIFPGAKVQLCNT ATGDRSWLRKIRPWFGHHYHFHVRLSCPSGSTGCVDQTPPPAGDGCADAQAWVNNILN PPPPDPNAKPRKPRPPVRLADLPAQCADVLQSQ" gene 358424..359344 /locus_tag="RD1_0364" /db_xref="GeneID:4198131" CDS 358424..359344 /locus_tag="RD1_0364" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680770.1" /db_xref="GI:110677763" /db_xref="GeneID:4198131" /translation="MRRRFTIAIISAVALAPWFWFKPVAPPDQPAHLLAVTDIPRDED WIGGLSGIDLTPDGTEFVFVTDRGHVARGQLLRRDGQLTGIEIDTKRVLVDPRGRVWE TLQTDAEGVAWAASGAIFVSFEHAHRVHAYPTLDTPEKLPSYTRAWGAFKQNGGLEAL AIQDGGSLFAIPEHVHPGAWAALVYRRKPGEAWQQAFTLPVTDEFSPVGADFGPDGRL YVLERGLYPFGFYSRVRAMRVQEDSVTDIETVLQTKLGTHGNLEGLAVWRDAAGTIRL TMVSDDNFYPFMRGEIVEYALTQRVATQPQ" gene 359414..360034 /locus_tag="RD1_0365" /db_xref="GeneID:4198132" CDS 359414..360034 /locus_tag="RD1_0365" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680771.1" /db_xref="GI:110677764" /db_xref="GeneID:4198132" /translation="MTRAHLPGIIAMAAIVVASNILVQFLFGNWLTWGAFTYPLAFLV TDIMNRVYGAQAARRVVFTGFIVGIICSLIGTQIMGEYGPLVTLRIAIGSGIAFLTAQ LLDVSIFSALRGGTWWRAPLASTLIGSTVDTALFFSIAFSASLSFIEPANDVSWAGEV LPILGFGPQAPLWVSLAIADWGVKLSLALLALVPFRLITGRMTAAQ" gene 360368..360784 /locus_tag="RD1_0366" /db_xref="GeneID:4198133" CDS 360368..360784 /locus_tag="RD1_0366" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680772.1" /db_xref="GI:110677765" /db_xref="GeneID:4198133" /translation="MRISDNITIEDWELTESFMRSSGPGGQNVNKVSSAVELRFEAAR SPNLPAPVKTRLKRLAGRRWTTDGALVLQCEETRSQARNREIIRERLAELIRKALVAP KRRIATRPTLGSKKRRLKAKKQRGEVKSLRGRVDPE" gene 360858..361604 /locus_tag="RD1_0367" /db_xref="GeneID:4198134" CDS 360858..361604 /locus_tag="RD1_0367" /EC_number="3.1.26.3" /codon_start=1 /transl_table=11 /product="3'- 5' exonuclease family protein, putative" /protein_id="YP_680773.1" /db_xref="GI:110677766" /db_xref="GeneID:4198134" /translation="METGADAITTCAAALCDTIYRANTQHKETPNRLWRRLAEEYRKP MTHNVYKNDLPDGLDLGPMVAIDCETMGLHPHRDRLCVVQLSGGDGKAHLIQIAKGQT EAPNLCKLLEDPKVLKLFHFGRFDIAAMLNAFGATAAPVYCTKIASRLVRTYTDRHGL AKLLQELLAIDISKQQQSSDWGAETLTDAQIEYAASDVLYLHQLREALNKMLEREGRM ETAQACFDFLPMRAKLDLMGWPDTDIFAHS" gene 361601..362563 /gene="kdsD" /locus_tag="RD1_0368" /db_xref="GeneID:4198135" CDS 361601..362563 /gene="kdsD" /locus_tag="RD1_0368" /EC_number="5.3.1.13" /codon_start=1 /transl_table=11 /product="arabinose 5-phosphate isomerase" /protein_id="YP_680774.1" /db_xref="GI:110677767" /db_xref="GeneID:4198135" /translation="MSGIFQDTARRVIRIEIDALQQLEQSIDDSFAKAVELMIAATGR IIVCGMGKSGHIARKIAATLASTGTPAHFVHPAEASHGDLGMMGAGDVVIVLSNSGET PELADVIAYTRRFSIPMIGVASRPESTLLRQSDVALVLPRAQEACGTGIVPTSSTTMT LALGDALAVALMEHRKFTPEHFRAFHPGGKLGAQLSKVSDLMHTGRAVPVVPGDAPMS EALREIGQKGFGVVAVSDPQGLLQGIITNGDISRHMDGLASFEAHNVMTPSPVTIPPD ALAEQAVGIMNDKKITCLLVVDPQEPRKLVGLIHIHDCLRIGLG" gene 362569..363177 /locus_tag="RD1_0369" /db_xref="GeneID:4198136" CDS 362569..363177 /locus_tag="RD1_0369" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680775.1" /db_xref="GI:110677768" /db_xref="GeneID:4198136" /translation="MHADRYSRMVAWLKVTLPLVALGMLSTLFLISRAVDPPSTIPFA DSEVQERLTNQQVTGPYYTSMSANGDQIAVIAETMTGPTGVGGTNKGKNVDIEMKMAS GTNITAYGNDALLDIANDLSRLTGDVRITTSTGYVLLSDELLMRMSAMDVTSPGAVSA TTPLGDLQAGAMRFFVPEGKEDGQWVFTNGVKLVHTPDKTKE" gene 363181..363672 /locus_tag="RD1_0370" /db_xref="GeneID:4198137" CDS 363181..363672 /locus_tag="RD1_0370" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680776.1" /db_xref="GI:110677769" /db_xref="GeneID:4198137" /translation="MTVFRNLILSLPLVFAATGLLAQGTQVAFGTIQDNSGLPVEVTA DSLAVDQNAGTALFTDNVIVIQGEMRLSADNVLVVYDTTAQAIDRIEATGNVVLISGQ DAAESERADYNVDDGTIVMSGSVLVAQGPSAISADTMTVQISDGTAQMSGRVKTVLQT GDQ" gene 363673..364431 /locus_tag="RD1_0371" /db_xref="GeneID:4198408" CDS 363673..364431 /locus_tag="RD1_0371" /codon_start=1 /transl_table=11 /product="ABC transporter, ATP-binding protein, putative" /protein_id="YP_680777.1" /db_xref="GI:110677770" /db_xref="GeneID:4198408" /translation="MARPRLTVAEGSAGLRVEHLRKSYRKKTVIRDFSMELDRGEVVA LLGPNGSGKTTTFYAIAGLVTPEGGSVQIDGQDVTTFPMYRRAQLGIGYLPQEMSIFR GLSVQDNIAAILDITEPDRHKRRERLEELLSEFSIEHLRRAPALALSGGERRRVEIAR CLAANPRYLLLDEPFAGVDPISVDDIRTLVADLKKRSIGVLITDHNVRETLEIVDRAY ILHEGKVLMSGTPQDVVENENVRRVYLGDKFRIS" gene 364678..365244 /locus_tag="RD1_0372" /db_xref="GeneID:4198409" CDS 364678..365244 /locus_tag="RD1_0372" /codon_start=1 /transl_table=11 /product="sigma-54 modulation protein, putative" /protein_id="YP_680778.1" /db_xref="GI:110677771" /db_xref="GeneID:4198409" /translation="MRYQISGKQIDIGEALQTHVREELSEAVKKYAERPTEAVVVFSK SAHEFVCEATVHLSTGLTAQAKAHQTEIYAAFDACREKMEKQLRRYKRRLKDHHKDRA EPVEIYGASSYILASEVESEDQEPETLQPIIVAEMETKIPSLSVGEAVMQMELQGAPV LVFRNEGKEGVNVVYRRDDGNIGWIDPK" gene 365285..365749 /gene="ptsN" /locus_tag="RD1_0373" /db_xref="GeneID:4198410" CDS 365285..365749 /gene="ptsN" /locus_tag="RD1_0373" /EC_number="2.7.1.69" /codon_start=1 /transl_table=11 /product="nitrogen regulatory IIA protein" /protein_id="YP_680779.1" /db_xref="GI:110677772" /db_xref="GeneID:4198410" /translation="MEFSELLKPEAVKVLNSASSKKRLMQDISDLSAQVYDLNADVVL DAMLAREALGPTGVGHGIALPHARLSDLDSVLGVFVLLDKPIDFGSVDRQPVDIAFAL FAPEDAGVDHLKALALVSRTLRDASVCAKLRANRNPATLYTILTSAEAEQAA" gene complement(365801..366694) /gene="gtaB" /locus_tag="RD1_0374" /db_xref="GeneID:4198411" CDS complement(365801..366694) /gene="gtaB" /locus_tag="RD1_0374" /EC_number="2.7.7.9" /codon_start=1 /transl_table=11 /product="UTP--glucose-1-phosphate uridylyltransferase" /protein_id="YP_680780.1" /db_xref="GI:110677773" /db_xref="GeneID:4198411" /translation="MTRKVTKAIFPVAGMGTRFLPATKSVPKEIMTLVDRPLIQYAID EARAAGIKEFIFVTSRGKGALEDYFDHAPQLEQSLRDKGKTKLLEMLENTNMESGAIA YIRQHKALGLGHAVWCARRLIADEPFAVILPDDVIAGDKPCLQQMVEAYEETGGNMVA AMEVPPEKASSYGMLDIETDMGSMVRVKGMVEKPPEGKAPSNLAVIGRYILAPSVLSN LNDMKKGAGGEVQLTDAIATEIEKDHGVYGYRFQGQRFDCGSKSGFLQATVSFGLARD DLRDDLSRYIHEIVSMSKAAQ" gene complement(366908..367708) /gene="kdsB" /locus_tag="RD1_0375" /db_xref="GeneID:4198412" CDS complement(366908..367708) /gene="kdsB" /locus_tag="RD1_0375" /EC_number="2.7.7.38" /note="CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS" /codon_start=1 /transl_table=11 /product="3-deoxy-manno-octulosonate cytidylyltransferase" /protein_id="YP_680781.1" /db_xref="GI:110677774" /db_xref="GeneID:4198412" /translation="MSVLIAIPARYASSRYPGKPLVGLRGASGQTLSLIERSWRAAME VSGIDRVVVATDDTRIQDAAQAFGAEVVMTSPYCANGTERCAEVHAALGGGYDIVVNL QGDAPLTPAWFIEDLVAGLLNAPTAEIATPVLRCDGETLQGLLNDRKAGRVGGTTAVF AQDNHALYFSKEVIPFTSRDYSEDAQTPVFHHVGVYAYRPAALAAYPGWQVGPLEQLE GLEQLRFMENGRSVLCVEVEAKGRQFWELNNPEDVPRLEAMMAAMGLE" gene complement(367708..368508) /gene="cysQ" /locus_tag="RD1_0376" /db_xref="GeneID:4198413" CDS complement(367708..368508) /gene="cysQ" /locus_tag="RD1_0376" /EC_number="3.1.3.7" /codon_start=1 /transl_table=11 /product="3'(2'),5'-bisphosphate nucleotidase" /protein_id="YP_680782.1" /db_xref="GI:110677775" /db_xref="GeneID:4198413" /translation="MFDYNKLTQVMRRLSIEAGAKIMEIYESDDFDVQTKSDQSPVTA ADEAADAIISAGLRAAFPDVLLITEEQAASHSQTGDTFLIVDPLDGTKEFIQRRGDFT VNIALVEDGVPTRGVVYAPARQRMFFTDASGQSVEETGSFAPETVGETKAMSVSAPDN AALMVVASKSHRDQATDDYINKYAVRDMKSAGSSLKFCLVATGEADLYPRLGRTMEWD TAAGHAVLAGAGGHVVRFDDLSPLRYGKSGYANPFFIAYAPGVELTKA" gene complement(368844..369443) /gene="alkB" /locus_tag="RD1_0377" /db_xref="GeneID:4198414" CDS complement(368844..369443) /gene="alkB" /locus_tag="RD1_0377" /codon_start=1 /transl_table=11 /product="alkylated DNA repair protein" /protein_id="YP_680783.1" /db_xref="GI:110677776" /db_xref="GeneID:4198414" /translation="MHLSVLGFDIYKGYLDLAAQQRVLDDVRDIVRSAPLVQPITPRG NKMSVRMTAAGAYGWVTDRQGYRHARTHPGGQDWPAIPESVLRVWKDLSGSARDPECC LVNFYGEGARMGLHQDKDEGSLEWPVLSISLGDDGLFRMGHSERGSKTQSVWLQSGDV VVMGGAARLAYHGVDRIRFGSSTLLENGGRLNLTLRVVT" gene 369654..371564 /gene="dnaK" /locus_tag="RD1_0378" /db_xref="GeneID:4198415" CDS 369654..371564 /gene="dnaK" /locus_tag="RD1_0378" /codon_start=1 /transl_table=11 /product="chaperone protein DnaK, putative" /protein_id="YP_680784.1" /db_xref="GI:110677777" /db_xref="GeneID:4198415" /translation="MSKVIGIDLGTTNSCIAIMDGSQPRVVENAEGARTTPSIVAFTD DERLVGQPAKRQAVTNPDNTIFGVKRLIGRRNDDAALAKDKKNLPFAVIDGGNGDAWV EAKGEKYSPSQISAFILGKMKETAESYLGEDVTQAVITVPAYFNDAQRQATKDAGKIA GLEVLRIINEPTAAALAYGLDKEQTQTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGD TFLGGEDFDMRIVNYLADTFKKEHSVDLTQDKMALQRLKEAAEKAKIELSSSSQTEIN QPFISMGSNGQPLHMVMKLTRSKLESLVGDLIKASLKPCKDALKDAGLSASDIDEIVL VGGMTRMPKVVEEVTKFFGKEPHKGVNPDEVVAMGAAIQAGVLQGDVKDVVLLDVTPL SLGIETLGGVFTRLIDRNTTIPTKKSQIFSTAEDNQNAVTIRVFQGEREMAADNKILG AFNLENIPPAPRGMPQIEVTFDIDANGIVSVGAMDKGTGKEQKITIQASGGLSDEDIE KMVKDAEENADADKARRELIEAKNQAESLIHSTEKSLEEHSDKVDPTTVEAIELAIAA LKDEMESENADKIKSGIQNVTEAAMKLGEAIYNASQEENDDVAEPADGPHDDQDDIVD AEFEDLDNDKRA" gene 371643..372797 /gene="dnaJ" /locus_tag="RD1_0379" /db_xref="GeneID:4198416" CDS 371643..372797 /gene="dnaJ" /locus_tag="RD1_0379" /codon_start=1 /transl_table=11 /product="chaperone protein DnaJ" /protein_id="YP_680785.1" /db_xref="GI:110677778" /db_xref="GeneID:4198416" /translation="MAKRDYYEVLGVSKGASSDDIKKGYRRKAKELHPDRNKDDPNAE AQFKEANEAYEVLKDADKKAAYDRYGHAAFEGGMGGGGGGRPGGGFGGGQDFSSAFSD VFDDLFGNFAGGGQRGGGNRASRGSDLRYNLQINLEDAFSGLQKTINVPTSIGCKTCN GSGAEGGSEPSSCPTCSGMGKVRAQQGFFTVERTCPTCSGLGQIIKNPCKSCQGAGRV EKDRALSVNIPAGVETGTRIRLAGEGEAGMRGGPSGDLYIFIEVAEHELFQRDGTNLF CRVPVSMAKAALGGSIEVPTIDGGRGRVQIPSGSQSGRQMRLRGKGMPALRGGSSGDM FIELAVETPVNLTSRQKELLAEFDELSENNNPESSSFFSSVKSFWDSMKG" gene complement(372925..373020) /locus_tag="RD1_0380" /db_xref="GeneID:4198417" CDS complement(372925..373020) /locus_tag="RD1_0380" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680786.1" /db_xref="GI:110677779" /db_xref="GeneID:4198417" /translation="MTKYLKHQVSGNAGLLSSALKNRCAALMAAA" gene complement(373054..375768) /gene="secA" /locus_tag="RD1_0382" /db_xref="GeneID:4198418" CDS complement(373054..375768) /gene="secA" /locus_tag="RD1_0382" /note="functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis app" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecA" /protein_id="YP_680787.1" /db_xref="GI:110677780" /db_xref="GeneID:4198418" /translation="MLGIGTISRKIFGSPNDRKVKATRPVIAQINALEPEFEKLSDEG LKEKTEEFRKRALEGESLDALLPEAFANCREAARRALGLRAFDTQLMGAVFLHQGNIA EQKTGEGKTLTATFAAYLNGLTGRGVHIVTVNEYLAKRDAAWMGSVFGALGLTTGVAY SDMPEDEKRKAYASDITYATNNELGFDYLRDNMKSELDQIYQKQHNFAIVDEVDSILI DEARTPLIISGPSQDRSEMYKTVDAVIPQVRDDHFELDEKTRNVTFTDEGNEFLEEIL HAQGLLEEGQSLYDPESTTVVHHVNQGLRAHKLFQRDKDYIVRDDNVVLIDEFTGRMM PGRRLSDGLHQAIEAKEGVDIKPENITLASVTFQNYFRLYDKLSGMTGTALTEAEEFM EIYGLGVVEVPTNKPIARVDEDDQVYRTAREKYEAMLEKIKESNAKGQPVLVGTTSIE KSEMLSNMLKQAGITHNVLNARQHEQEAQIVADAGKYGAVTIATNMAGRGTDIQLGGN VDLQVMNALTADPDADPEALRASIEAQHADEKAKVLAAGGLYVLASERHESRRIDNQL RGRSGRQGDPGRSSFFLSLEDDLMRIFGSERLEKVLKTLGLKEGEAIVHPWVNKSLER AQSKVEGRNFDIRKQLLKFDDVMNEQRKVIFGQRREIMEAKDLSEITTDMRHQVIDDF IEQYLPPNTYADQWDAEGLYAAVQEQLGIDVPVMDWVEEEGVDDEAIRERLVEATDKL MTEKAGQFGAENMRNIEKQLLLQAIDTKWREHLLTLEHLRSVVGFRGYAQRDPLNEYK NESFQLFESMLDSLREDVTQKLSQIRPMTEEEQQAMIEQIRAQQAAAQAAAAGPTVSA QAGPVAGPADAAVAFDENDPSTWGNPGRNEPCPCQSGKKFKHCHGRLI" gene 375943..376800 /locus_tag="RD1_0383" /db_xref="GeneID:4198419" CDS 375943..376800 /locus_tag="RD1_0383" /codon_start=1 /transl_table=11 /product="PPIC-type PPIASE domain protein" /protein_id="YP_680788.1" /db_xref="GI:110677781" /db_xref="GeneID:4198419" /translation="MQKHLRILAFSALTAAIAAPVVAQDDTALTADTVIATVNGEDIK LGHMIAARATLGERYNQMPAEQLWNGIVEQLIQQTALAQGIESLSAGEAMALENQERS LKAAKAIEIGLEQAVTEEDIQAAYDAEFGNLDPEEEFNASHILVATEEEAIAVKEAID GGANFAATAREKSTGPSGPNGGELGWFSTGMMVPSFEAATIALEVGEVSDPVETQFGW HVITLNDTRQKNIPTLEEAREGIEARLAQDAALGIIQNAAAGAAIEVTPFENADERFD LINRFDLLE" gene 376807..378033 /gene="argJ" /locus_tag="RD1_0384" /db_xref="GeneID:4198420" CDS 376807..378033 /gene="argJ" /locus_tag="RD1_0384" /EC_number="2.3.1.35" /EC_number="2.3.1.1" /note="bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate" /codon_start=1 /transl_table=11 /product="bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein" /protein_id="YP_680789.1" /db_xref="GI:110677782" /db_xref="GeneID:4198420" /translation="MAKITVVSPLAPKRFPEMPVIDGVSFSTVAAGIKYEGRADVMLA RLAPGTTVAGVFTKSATRSAPVLDCQEKLGGPAKDGAAILVNSGNSNAFTGRNGRDAV ARIVGAVARACDVPETRVFTSSTGVIGEPLPFERITERLDTLAATLDPNAIEAAAAAI MTTDTFTKGATASVEIDGKTVSIAGIAKGSGMIAPDMATMLVYIFTDARIDQGTLQSL VATHNEKTFNCITVDSDTSTSDTVLVCATGASGVDVGDSAPFGDALHKVMKDLAHLVV KDGEGATKFVEITVTGAASDKDAKTHALSVANSPLVKTAIAGEDPNWGRIVMAIGKSG APADRDALSIRFGDVEVARKGWVNPDYVEAEAAAHMKGQNICIHVDIGLGSGKATVWT CDLTHGYIEINADYRS" gene 378052..378450 /gene="mutT" /locus_tag="RD1_0385" /db_xref="GeneID:4198421" CDS 378052..378450 /gene="mutT" /locus_tag="RD1_0385" /EC_number="3.6.1.-" /codon_start=1 /transl_table=11 /product="mutator mutT protein, putative" /protein_id="YP_680790.1" /db_xref="GI:110677783" /db_xref="GeneID:4198421" /translation="MKTVLVSAVALIDIDGRILLAQRPEGKAMAGLWEFPGGKVEAGE TPEHALIRELEEELGINTWQSCLAPLTFASHSYDDFHLLMPLFACRKWEGTPMSKENQ SLKWVFARDLKNYPMPAADIPLIPVLRDLL" gene complement(378784..381258) /gene="infB" /locus_tag="RD1_0386" /db_xref="GeneID:4198422" CDS complement(378784..381258) /gene="infB" /locus_tag="RD1_0386" /note="Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-2" /protein_id="YP_680791.1" /db_xref="GI:110677784" /db_xref="GeneID:4198422" /translation="MSDTDGKKTLGLRGGAPRPGNVKQSFSHGRTKNVVVETKRKRVV VPKAGATTSAGGKAPIGDPSRRPAGISDAEMERRLKAVKAAKAREAEEEAARIAEEKA RAEERERRRAEQEERERAEREREESLKAKAEEDKRRKDEAEAAAKAAAAPAAEPVVQR PAAKAAPEPAPRKQQDRDRDNKRGGKGNDDSRRSGKLTLNQALAGGEGGRQRSMAAMK RKQERARQKAMGGQVEREKVVRDVQVPEAIVVSELANRMSEKVGEVVKALMNNGMMVT QNQAIDADTAELIVQEFGHRIVRVSDADVEDVIKEVEDDEADLKTRPPVVTIMGHVDH GKTSLLDAIRKAKVVAGEAGGITQHIGAYQVKTDSGQLLSFLDTPGHAAFTSMRSRGA QVTDIVVLVVAADDAVMPQTIEAINHAKAAEVPMIVAINKIDRPAADPTKVRTDLLQH EVIVEQMSGDVQDVEVSAITGQGLDDLLEAIALQAEILELKANPNRAAQGAVIEAQLD VGRGPVATVLVQNGTLRQGDIFVVGEQYGKVRALINDQGERVKEAGPSVPVEVLGLNG TPEAGDVLNVTSTEAQAREIASYRANAAKDKRAAAGAATTLEQLMANAKADEDVSELP ILVKADVQGSAEAIVQAMEKIGNDEVRVRVLHSGVGAITETDVGLAEASGAPIMGFNV RANASARNTANQKGVELRYYSIIYDLVDDVKAAASGLLSAEIRENFIGYATIKEVFKV TGVGKVAGCLVTEGVARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVAEVQSGQECGMA FENYDDIRADDVIEIFEREEITRTLT" gene complement(381268..381888) /locus_tag="RD1_0387" /db_xref="GeneID:4198423" CDS complement(381268..381888) /locus_tag="RD1_0387" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680792.1" /db_xref="GI:110677785" /db_xref="GeneID:4198423" /translation="MGRGGAPKDRGDGPERKCIATGDVQPKYGLVRFVVGPDGDVVPD ILGKLPGRGIYVSADRAALEKAIAKGLFSRAAKQSVKVPETLVNEVETQLARRVVDLI SLQRKAGRAVAGFEKVKNWLQMEEAEVLIQAVDGSGRGKSKLSTPHYGSYIGWLTADE LGLAFGRQTVIHGALASGGLTQRVVEEAQRLKGVRVKEDGRGHPKG" gene complement(381911..383527) /gene="nusA" /locus_tag="RD1_0388" /db_xref="GeneID:4198424" CDS complement(381911..383527) /gene="nusA" /locus_tag="RD1_0388" /note="modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination" /codon_start=1 /transl_table=11 /product="transcription elongation factor NusA" /protein_id="YP_680793.1" /db_xref="GI:110677786" /db_xref="GeneID:4198424" /translation="MAITSANQLELLQTAEAVAREKMIDPGLVVEAMEESLARAAKSR YGAEMDIRVHIDRKTGRATFTRVRTVVEDELLENYQAEFTVEQAKQYMENPEVGQQLI EEVPPVEMGRIAAQSAKQVILQKVREAERDRQYEEFKDRAGTIINGLVKREEYGNVIV DVGAGEAILRRNEKIGRESYRPNDRIRVYIKDVRREQRGPQIFLSRTAPEFMAELFKM EVPEIYDGIIEIKAVARDPGSRAKIAVISYDGSIDPVGACVGMRGSRVQAVVNELQGE KIDIIPWNEDQPTFLVNALQPAEVSKVVLDEEAGKIEVVVPEEQLSLAIGRRGQNVRL ASQLTGLDIDIMTEEQESARRQAEFELRTKLFVDNLDLDEFFAQLLVSEGFTSLEEVA YVEVDELLVIDGVDEDTANELQARARDVLEAQNKAALESARALGVEDSLIEFEGLTPQ MIEALAKDDVKTLEDFATCADWELAGGWTTVDGERSKDDGVLEPFDVTLEEAQDLIMT ARVMLGWVDPADLEPDEDVAEDAEAEEAEV" gene complement(383527..384117) /locus_tag="RD1_0389" /db_xref="GeneID:4198425" CDS complement(383527..384117) /locus_tag="RD1_0389" /note="in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680794.1" /db_xref="GI:110677787" /db_xref="GeneID:4198425" /translation="MNNDLIAKAAIDRRMAEIITPVIEDMGFELVRVRLMSGKSTILQ IMADRPDGGIEVDDCAEISQAVSAVLDVEDPILDEYTLEVSSPGIDRPLTRLKDFEMF EGYEAKIETGDMVDGRRRFKGALAGVEDDEVLINIEEGTIGLKFDWLSDAKLVLTDDL IKEMLRQRKAAGALDETNFDEVSTELETDTPSEGDQ" gene complement(384261..385154) /locus_tag="RD1_0390" /db_xref="GeneID:4198426" CDS complement(384261..385154) /locus_tag="RD1_0390" /codon_start=1 /transl_table=11 /product="ABC transporter, substrate-binding protein" /protein_id="YP_680795.1" /db_xref="GI:110677788" /db_xref="GeneID:4198426" /translation="MTRRSHMDRRALFATGAAAALLAATGVSVQASPSRKGRLRAALS GASRTDRFDARQDHGLFMQVAMAGAVFDTLTEVAADGTLHGELSTAWEGDARAQVWTL TLRDDVDFHDGTRFAAQDVVASFDLHRDTLLADVARVAVLDARRVLVELHRGDPDFPY RLSDPRLVMYPSRNIAEAMRDGIGTGLYRVQRFQPGRHFLGARVAHHYKDGRAGWFDT VELVALSSSAVRAEALRDNYVDAAELSDTADLADLSGITLLPETHAMTAAVSQGLALP AQTGRRWPLDNLRAAERWWMA" gene complement(385151..386092) /gene="pip" /locus_tag="RD1_0391" /db_xref="GeneID:4198427" CDS complement(385151..386092) /gene="pip" /locus_tag="RD1_0391" /EC_number="3.4.11.5" /codon_start=1 /transl_table=11 /product="proline iminopeptidase" /protein_id="YP_680796.1" /db_xref="GI:110677789" /db_xref="GeneID:4198427" /translation="MQYLYPPVDPFDQRMLDVGQGHRIYVEQCGNPAGIPVIVLHGGP GGGCSPAMRRYFDPTVFRVILFDQRGCGRSRPHASVTHNTTWHLVDDIELIRRTLDID DWIVFGGSWGATLSLIYAQSHPDRTRHLVLRGVFLMTQAELDWFYGGGAGKFWPEVWA RFTGPIPEDERGDLIEAYRRRLFSGDMPQETRFAKAWSSWENALASIHSSGTSGDAPG EYARAFARLENHYFSNAGFLDFDGQILANVGRIAHIPGVIVQGRYDMICPPDSAYRLA EAWENCELKMVRNAGHALSEPGISAELVRTMDRIGGR" gene 386171..386917 /gene="ubiG" /locus_tag="RD1_0392" /db_xref="GeneID:4195382" CDS 386171..386917 /gene="ubiG" /locus_tag="RD1_0392" /EC_number="2.1.1.64" /note="Involved in ubiquinone biosynthesis" /codon_start=1 /transl_table=11 /product="3-demethylubiquinone-9 3-methyltransferase" /protein_id="YP_680797.1" /db_xref="GI:110677790" /db_xref="GeneID:4195382" /translation="MQAPQTTVDPSEIAKFEAMAAEWWDENGKFKPLHMLNPCRLDYI TTQIAGEFDRDLASPEPFKGLRILDIGCGGGLLAEPMARLGADVVGADAAERNIPVAR VHAEQSGLTIDYRHTTAEALAAEGEQFDVVLNMEVVEHVASPIDYLIACRQLLKPGGL QVCSTLNRNPKSYVMAIIGAEHVMRWLPKGTHEWSKFITPDELYDLLRQSGMDPVDRK GFVFNPISWSWKLSGRDLSVNYVTASVKPA" gene complement(387016..387459) /locus_tag="RD1_0393" /db_xref="GeneID:4195383" CDS complement(387016..387459) /locus_tag="RD1_0393" /codon_start=1 /transl_table=11 /product="transcriptional regulator, MarR family" /protein_id="YP_680798.1" /db_xref="GI:110677791" /db_xref="GeneID:4195383" /translation="MNEDKNALAIALFTEVMAADQLVRARLSRVLPKGMEISHFSVLN HLAWIADERTPAQLAETLHVTRGAMTNTLGKLEWAGYVHIRPDWDDARRKLVAISPAG RQARDYAVGTVTPVITQMVDKMGAEQVRGAIPILREMRMLLGDEG" gene complement(387460..388290) /locus_tag="RD1_0395" /db_xref="GeneID:4195384" CDS complement(387460..388290) /locus_tag="RD1_0395" /codon_start=1 /transl_table=11 /product="hydrolase, carbon-nitrogen family, putative" /protein_id="YP_680799.1" /db_xref="GI:110677792" /db_xref="GeneID:4195384" /translation="MKTALIQLNVTDDPEENLPVTLGYVRQAAAEGATFILTPEVTNC LSNSRSHQREVLSHEEDDPTLKALQHEARTLGVWILIGSLALKTQDADGRFANRSFMI DPQGDIVARYDKIHMFDVQVTPEETYRESEGYRPGGRAVTAQTDFATVGMTVCYDVRF SALHMALARAGADILTVPAAFSPVTGAAHWHALLRARAIETGCYVLAPAQTGTHASKH HKTRATYGHSLVVGPWGDVQLDAGTQPGVYMTDLHMEQVGSARARIPSLANARLFDGP " gene complement(388290..388547) /gene="grxC" /locus_tag="RD1_0396" /db_xref="GeneID:4195385" CDS complement(388290..388547) /gene="grxC" /locus_tag="RD1_0396" /codon_start=1 /transl_table=11 /product="glutaredoxin 3" /protein_id="YP_680800.1" /db_xref="GI:110677793" /db_xref="GeneID:4195385" /translation="MKNVEIYTSPLCGFCHAAKRLLSQKGIDFAEVDVLADPDRKPEM VQRAKGSRTVPQIFVGDVHVGGCDDLYALERAGKLDQLLAA" gene complement(388587..389318) /gene="comF" /locus_tag="RD1_0398" /db_xref="GeneID:4195386" CDS complement(388587..389318) /gene="comF" /locus_tag="RD1_0398" /codon_start=1 /transl_table=11 /product="competence protein F, putative" /protein_id="YP_680801.1" /db_xref="GI:110677794" /db_xref="GeneID:4195386" /translation="MSQLSFQTAVSLVYPPRCLGCGGQVESDFGLCGGCWRDTPFIGG SICDSCGAPLPGDNHNECLKCDDCMITPRSWSKGRAALLYKDNARRLVLALKHGDRQE IAEPAALWMSRAIEDLPLDNVLVAPIPLHWTRLLKRRYNQSALLAQALARHAGLPVCP DLLQRQRRTQPMDGMTKEVRFTSVKGAIRAHPKRRHRMAGRPVLLVDDVFTSGATLSS ATDACLAAGSGPVYVVTLARVTKNT" gene 389437..390153 /locus_tag="RD1_0400" /db_xref="GeneID:4195387" CDS 389437..390153 /locus_tag="RD1_0400" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680802.1" /db_xref="GI:110677795" /db_xref="GeneID:4195387" /translation="MQDRLTLVNRAFTVPAVVTPFPDLWRKHMPGAHIVRDAETLDLE VGAHDLVIHAMSLHWANDPVGQLIQCRRSMKPDGLMIAATLGGQTLQELRNCLGDAEI ALTGGLSPRIAPMGEIRDLGALLQRAGFALPVADSVTLRAQYRDAFHLMRDLRNMGET NALEQRRRVTPPRALFERMAAIYAENYATQADQVIATFEMVFLTGWAASDTQQKPLRP GSAKQRLADALRVPEQPLRD" gene 390239..391282 /gene="hemH" /locus_tag="RD1_0401" /db_xref="GeneID:4195388" CDS 390239..391282 /gene="hemH" /locus_tag="RD1_0401" /EC_number="4.99.1.1" /note="protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic" /codon_start=1 /transl_table=11 /product="ferrochelatase" /protein_id="YP_680803.1" /db_xref="GI:110677796" /db_xref="GeneID:4195388" /translation="MARPTHAESDHPEVAKPKVGILLANLGTPDNYDYWSMRRYLNEF LSDRRVIDYSPWIWQPLLQLIILSKRPFSSGAAYKSIWNEEDGESPLMTITKAQTKKV KEVMAQRHGDEVMVDFCMRYGNPSTRSKVAAMTAAGCRKILFFPLYPHYAGATSATAN DEFFRSLTYEKWQPTTRTVDPYFDRPDYIEALAQSIERAYAGMVTKPDILVCSYHGVP IRYLMEGDPYHCQCQKTTRLLKERLGWADTEITTTFQSKFGPEEWLQPYTVEEVARLA EAGKKNIAVCAPAFSADCIETLEEINEEIKESFEEAGGEQFTYIPCLNDDDAHIAALC NTIDDNLKGWVDT" gene complement(391673..392284) /locus_tag="RD1_0402" /db_xref="GeneID:4195389" CDS complement(391673..392284) /locus_tag="RD1_0402" /codon_start=1 /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG family protein" /protein_id="YP_680804.1" /db_xref="GI:110677797" /db_xref="GeneID:4195389" /translation="MSEQNFKNPGRRAFLAGGAALLASPAIAQDLGSVNSAGTTQGER DLTETVRRNISSFRTLDWQPYFSDLRRGAILVDIDSRALHYWAEGGDFYKLYPSSVPL SEELTRRGRTKIVRKVEGPSWRPTPSMLERNPDWPEFIGPGPDNPMGTHALYLSWTYY RIHGTHDTRKIGRQSSNGCIGLFNEHIAELYELSEVGTQVLLI" gene 392449..392994 /locus_tag="RD1_0403" /db_xref="GeneID:4195390" CDS 392449..392994 /locus_tag="RD1_0403" /codon_start=1 /transl_table=11 /product="SCP-like extracellular protein, putative" /protein_id="YP_680805.1" /db_xref="GI:110677798" /db_xref="GeneID:4195390" /translation="MIRLISLLVALTVALAACAPTSSGTRLGSDGKPLPQVYRIKERD TANIQFRMLDAVNALRSASGQGPVALDAQLNAAAATHSRDMSVQNRPWHFGSDGSSPI DRVQRVGFAGTLVGENISETYETEIETLGAWMEKPDTRRVILSPDANRLGFAWFQEDN GKIWWTLILGKASGAGAGLGS" gene complement(392999..393460) /locus_tag="RD1_0404" /db_xref="GeneID:4195391" CDS complement(392999..393460) /locus_tag="RD1_0404" /codon_start=1 /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG family protein" /protein_id="YP_680806.1" /db_xref="GI:110677799" /db_xref="GeneID:4195391" /translation="MSLGACATGSKFKRYSGPEVTFVVVNKGARRMHLLHNETALRSY DIHLGFAPVGHKQFEGDGKTPEGLYRIDRRNPNSDFHLSLGISYPNVNDYAAAKAVGK SPGGDIFIHGQKSPFRKDEPDWTWGCIAVTNPEIEEIYAMVQNDTLIQLNA" gene complement(393586..394365) /gene="ccaA" /locus_tag="RD1_0405" /db_xref="GeneID:4195392" CDS complement(393586..394365) /gene="ccaA" /locus_tag="RD1_0405" /codon_start=1 /transl_table=11 /product="voltage-gated sodium channel subunit" /protein_id="YP_680807.1" /db_xref="GI:110677800" /db_xref="GeneID:4195392" /translation="MGVREQLDIWLDNRWVTNLVIAVIIFNAILLGMETSPQIMAEAG DLIIMLDKACLTFFVVEIFLKLVARGRRFFKSGWNIFDVLIVGAALVPGSQTMSVLRA LRILRVLRVISVAPSLRRVVEGFVTALPGMGSVFVLMAIIFYIGSVISTKLFAASFPQ WFGSLPQSGYTLFQIMTLESWSMGIVRPVMEVYPFAWMFFIPFIMMTTFAVVNLLVGL IVNSMQDAHQQEAGEQTDAYRDEVLSRLIAIEEKLKDRPRS" gene complement(394385..395611) /locus_tag="RD1_0406" /db_xref="GeneID:4195393" CDS complement(394385..395611) /locus_tag="RD1_0406" /EC_number="2.1.1.-" /codon_start=1 /transl_table=11 /product="RNA methyltransferase, putative" /protein_id="YP_680808.1" /db_xref="GI:110677801" /db_xref="GeneID:4195393" /translation="MTELLISRLGLHGDGIADGPVYVPRVLPGETVEGRVSGQVLQDV KVIRPSDRRVSAPCAHYKSCGGCQLQHADDAFVADWKVDVVRQALANHGIETVFLPIR TSPAKSRRRAGFAARRTKKGALVGFHGRASDTIIPVERCEILDPAVLQGARIAEELAL AGAIRKTALAVSVTLTKSGLDVAASKGKPLDGPLRQRLAAICEAQVIARLSWDDEVVA MRTPPQYEFDGIDVAPPPGAFLQATAHGEAALLAAVRDITQDAGRIVDLFAGCGTFAL PLARRCEVHAVEGDGDMTAALDAGWRHAQGLKNVTTETRDLFRRPLVPMELTRVDAVV LDPPRAGAEAQVVELAEAAVPRLAYVSCNPVTFARDAAVLCAAGYVLDWVQVVDQFRW SAHVELAASFTAAHMR" gene complement(395650..397482) /locus_tag="RD1_0407" /db_xref="GeneID:4195394" CDS complement(395650..397482) /locus_tag="RD1_0407" /codon_start=1 /transl_table=11 /product="ABC transporter, transmembrane ATP-binding protein" /protein_id="YP_680809.1" /db_xref="GI:110677802" /db_xref="GeneID:4195394" /translation="MNIGGWIDAFRRADGSPPQSLGAFMLWCLSGSWPALCLATVLSA LAGAMEVGTALILGLVIDATAASTPDAFFSGDNLPVVIGALAFFLLARPVLYGLSSAT NSIIVMPNVNPLVLSRLHRWTLGQTVGFFDNDFAGRIAQKQMQAARAVTDVVSELINV VAFALAALIGSVALLFAIDWRVALCFAVWLVAYFALINWFLPRIRERSARRAGARAMV SGQIVDTITNIKTVKLFAHAEYEDKAALGAMQTFRERALAFGYLSAGFRLALMSLAGL LPVLLIGGTILLWQAGQATQGDIVAAGAVAIRIAQMTGWVSFTLMQIYSNIGEVEDGI KTLTPRERIEDNASAKTLDVPAGQIKLQDVGFAYGRETGGVQGINLTIHPGEKIGIVG ASGVGKSTLVALLLRLYDAEKGRITIDGADVTEVTQESLRRNIGMVTQETAMFNRSAM DNILYGRPDATREEVIAAAQKAEADAFIQTLEDHRGRTGYDAHLGERGVKLSGGQRQR IALARAILKDAPILVLDEATSALDSEVEAAIQSALERVMEGKTVLAIAHRLSTLTEMD RIIVMKDGQIVEDGRHEALLAQQGLYAQYWERQSGGFIRTQAAE" gene complement(397479..399317) /locus_tag="RD1_0408" /db_xref="GeneID:4195395" CDS complement(397479..399317) /locus_tag="RD1_0408" /codon_start=1 /transl_table=11 /product="ABC transporter, transmembrane ATP-binding protein" /protein_id="YP_680810.1" /db_xref="GI:110677803" /db_xref="GeneID:4195395" /translation="MFRYFENLIDPYADYVETDQPPAKLWPFLWSFAGQFRKLFIVAG FMSIIVAGIEVGLIYYMGRVVDLMEGDPAVFWARHGTELILVSLFILFLRPAIQALDV LVLNNAILPNFGSLMRWRNHRHVLRQSVGWFENDFAGRIANRMMQAPSAAGEVVFQIF DALSFSLAYFLGAAILLSTADPRLLIPLLLWFVLYAALVRWTVLRVGPASEAASNARS KLTGRLVDAYTNIHSVKMFAHHEREINYAREAIEETRVTFQKEMRVFTKMDVVLVMLN GVLIIGVVGWAMLLWVQGTASVGVVAAATALTLRLNAMTGWIMWALTSFFRELGVVAE GMQTIAQPVTLTDAADAKPLRLTSGEISIEGLSHHYGRSSGGLDRIDLTIRRGEKVGL IGRSGAGKSTLVKLLLRFYDAEAGRITIDGQDISTVRQDSLRLAIGMVQQDSSLLHRS VRDNLMYGRAGASEEQMIAAAKQAQAHEFILDLEDPEGRRGYDAHVGERGVKLSGGQR QRITLARVILKDAPILLLDEATSALDSEVEAAIQDTLYGMMEGKTVIAIAHRLSTIAK MDRILVMDKGRIVEDGSHDALLSKGGLYADFWARQSGGFLSVEENQ" gene complement(399488..400666) /locus_tag="RD1_0409" /db_xref="GeneID:4195396" CDS complement(399488..400666) /locus_tag="RD1_0409" /EC_number="2.7.7.25" /codon_start=1 /transl_table=11 /product="polyA polymerase family protein, putative" /protein_id="YP_680811.1" /db_xref="GI:110677804" /db_xref="GeneID:4195396" /translation="MERSDVINLPADTAWLHDADALAVCDALSCAGGAVYFVGGCVRD ALLGIARSDVDLATDQTPENVMRLAEAAGLRAVPTGLDHGTVTVVSGGTGFEVTTFRR DTSTDGRHAVVSFSTDIREDARRRDFTMNALYAASDGRLVDPLNGVQDCLNRRVRFIE DPQKRIREDYLRILRFFRFHAWYADPAAGFDPDALDAIAQNTAGLAQLSAERIGTEMM KLLRAPDPAPSVAAMRQTGCLARVLPGSDDRFLAPVVHLEGSMGHGPDPVLRLSALGG DMAEDVLRLSRAEARKLKQLQVFGFGPMSLAEITYRENADLARGAAILRAAFASQPVP ASAQDEISKGAQAEFPIKASDLMPTYQGKALGDRVRLLEQQWIASGFSLTRDALLALE " gene complement(400645..401235) /locus_tag="RD1_0410" /db_xref="GeneID:4195397" CDS complement(400645..401235) /locus_tag="RD1_0410" /codon_start=1 /transl_table=11 /product="hydrolase, putative" /protein_id="YP_680812.1" /db_xref="GI:110677805" /db_xref="GeneID:4195397" /translation="MTDLARIRHALTRPGRPSSDFDLNKDVVLPPARKLRPAGVLAAV FEARKGLHLILTKRSSGLKHHPGQIAFPGGKQDEGDRDVTAAALREAHEEIGLQASNV EILGTLPAHETVTGFVVTPVIGYVRKPFEYRPEPGEVDEVFTVPLSHVLNKDNFAIEG RMWRGQRRSYFAVPFGPYYIWGATARMLRAWSDQMS" gene complement(401228..402259) /gene="hslO" /locus_tag="RD1_0411" /db_xref="GeneID:4195398" CDS complement(401228..402259) /gene="hslO" /locus_tag="RD1_0411" /codon_start=1 /transl_table=11 /product="chaperonin, 33 kDa, putative" /protein_id="YP_680813.1" /db_xref="GI:110677806" /db_xref="GeneID:4195398" /translation="MDAVCQSPGHKETPMTLGHKIAWDDTVLPFQLDASDIRGRVARL DGALDGILKQHNYPAHVEALVAEMALLTALIGQTVKLRWKLQLQVQSKGPVRMITTDY YGPEDTGGPARIRAYASYDETRLTDGAPFDQVGEGYFAIMIDQGQGMKPYQGITPIAG DSLAACAEAYFAQSEQLPTRFSLSFGRSTEPQVDEHWRGGGIMLQHMPKASPFVAQGD GSGDVLQPSDLVEGDEKENWNRVNILLDTVEEMELIGPKLSPSDLLLRLFHEEVPRVY DAQVVRFGCSCSEDRVRQSLSIYSARDIETMTTDEGRVTADCQFCGAHYDLDPKTVGF EAEGEQAGD" gene 402299..402748 /locus_tag="RD1_0412" /db_xref="GeneID:4195399" CDS 402299..402748 /locus_tag="RD1_0412" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680814.1" /db_xref="GI:110677807" /db_xref="GeneID:4195399" /translation="MIPRVGHAPEAKRRYTARPGAYAILPHEARFLLTLQVADRLDVQ LPGGGIDPGEQPLQALHREVLEEIGWRIANPRKMGVFRRFTYMPEYDLWAEKICHIYV AKPVLQIADPIEEDHETLLLPADQAIDALGNDGDRLFLSRYISMGSG" gene complement(402724..403935) /locus_tag="RD1_0413" /db_xref="GeneID:4195400" CDS complement(402724..403935) /locus_tag="RD1_0413" /codon_start=1 /transl_table=11 /product="response regulator" /protein_id="YP_680815.1" /db_xref="GI:110677808" /db_xref="GeneID:4195400" /translation="MVDDSRLQRKILSSSLVRWGYEVIEAASGEEALDICIAQRPELV ISDWVMPMMDGIQFCKEFRELTSDSYGYFILLTSKSEKNDVAEGLDAGADDFLTKPVN GNELRARITAGERILKMQLELTQKNRVIGDTLKELQRLYDSLDNDLIEANKLQESLIP ERFKQIGDSHLSLLLRSSGHVGGDLVGHYPAGDGHLGLYSLDVSGHGISSALMTARLA GYLSGSAPDQNIALEKGEDGSYRSRPLFEAIETLNEMVLDEMETEHYFTLMLADINLR TGEVLIAQAGHPHPVIQRKSGEITQKGTGGFPVGLMSGVTFEQFETKLEPGDRLMIFS DGVTECPNAAGEMLGEEGLETFLRDLHHVTGPALFETLMWKLGEFAGTSDFPDDVSGI LFEFQPDPIEM" gene 404158..404490 /locus_tag="RD1_0414" /db_xref="GeneID:4197982" CDS 404158..404490 /locus_tag="RD1_0414" /codon_start=1 /transl_table=11 /product="Hpt domain protein" /protein_id="YP_680816.1" /db_xref="GI:110677809" /db_xref="GeneID:4197982" /translation="MIDWDRVAALREEVGAEDFDEVVELFLQEVDEEIETLAAQPVQD GLSEKLHFLKGSALSLGFRAFSDLCQTGEAALAQDPAASVDVEELQNSYQSSRSSFLN DLPTKFAC" gene complement(404487..405278) /locus_tag="RD1_0415" /db_xref="GeneID:4197983" CDS complement(404487..405278) /locus_tag="RD1_0415" /codon_start=1 /transl_table=11 /product="putative dehydrogenase" /protein_id="YP_680817.1" /db_xref="GI:110677810" /db_xref="GeneID:4197983" /translation="MAFTGQTVVVTGGLSGIGAALVRQFEALGARVCVFDIVDVPASG ASITAYVKCDVSVQQDLRDAIQKVEREVGAIDIFVSNAGVMSAGPPLGDGDDWARCLS VNLMAHVYAARVLIPLMAARGGGYLVTVASAAGLLNQIGDAAYSASKHAAVSFAESIA ITHAEDNIGVSLVCPQYVATPLLGLTAADIEGQSLLTADQVADRVLHAVKARQFLVLP HPEVRTYALARAEDHDRWVSGMRKLRARSIKEYGDALPRRFYRLV" gene complement(405287..406519) /gene="ilvA" /locus_tag="RD1_0416" /db_xref="GeneID:4197984" CDS complement(405287..406519) /gene="ilvA" /locus_tag="RD1_0416" /EC_number="4.3.1.19" /note="catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic" /codon_start=1 /transl_table=11 /product="threonine dehydratase" /protein_id="YP_680818.1" /db_xref="GI:110677811" /db_xref="GeneID:4197984" /translation="MTPSFRQSADAATLAMRDVFPATPLMRNDLLSAKYDADIWLKRE DLSPVRSYKLRGAFNAMRKVIPARDVFVCASAGNHAQGVAFMCKHFGVHGVVFMPVTT PAQKVMKTKVFGGEFVEVRMVGDYFDQTLSQAQAFCAEAHAHFLSPFDDEDVIEGQAS VAAEILDQLGHAPDRIVLPVGGGGLSAGTRSYFRDDTQYTFVEPSGAKSLAAAISEGA PVDVSPINSFVDGAAVAKIGARTFARLKDVAPADIIDLSEDRICGTIVEMLNIEGIVL EPAGALAVEALAEIPQAIKGKTIVCIASGGNFDFERLPEVKERAQRYAGLKKYFILRL PQRPGALKDFLQTLGAQDNITRFEYMKKSARNFGSVLIGIETDDPHNFFDMFQRIDDA GFTYTDITNDETLAQFVI" gene 406646..407866 /gene="argG" /locus_tag="RD1_0417" /db_xref="GeneID:4197985" CDS 406646..407866 /gene="argG" /locus_tag="RD1_0417" /EC_number="6.3.4.5" /note="catalyzes ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate" /codon_start=1 /transl_table=11 /product="argininosuccinate synthase" /protein_id="YP_680819.1" /db_xref="GI:110677812" /db_xref="GeneID:4197985" /translation="MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEE LEPARAKAEMMGASDIYIEDVREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKR LVEIAEETGADAIAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDF AEKNQIPIAKDKRGEAPFSVDANLLHTSSEGKVLENPAVDAPDYVYQRTVNPEDAPDT PEYIEIGFEKGDAVSINGEAMSPATILTKLNEIGGKHGCGRLDLVEGRFVGMKSRGIY ETPGGTLLLEAHRGIESITLDRGAMHLKDELMPRYAELIYNGFWFSPERTMLQAAIDA SQTHVTGTVRLKLYKGLARTVGRWSDHSLYSEAHVTFEEDAGAYDQTDAAGFIQLNAL RLKLLAARDRRLKS" gene complement(407957..408661) /locus_tag="RD1_0418" /db_xref="GeneID:4197986" CDS complement(407957..408661) /locus_tag="RD1_0418" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680820.1" /db_xref="GI:110677813" /db_xref="GeneID:4197986" /translation="MRIAMWSGPRNLSTAMMYSFGARSDFTIMDEPFYAPFLAATHTD HPMRDDILRAHENDPAAVATQCLAPQSTPHLYMKHMPHHMVAGFPMDWAHACVNVHLI RHPARVIASYSAKWDDLTLDQIGFVQQSALYDQLGGVVIDSFDIRQNPEKALRRLCSA IDLPFDPAMLRWPAGPRAEDGIWAAHWYGAVHRSTGFAGAEGPLPDVDPRHRDMLEQA LPHYEKMRAAALDSGV" gene 408854..409516 /gene="msrA-1" /locus_tag="RD1_0419" /db_xref="GeneID:4197987" CDS 408854..409516 /gene="msrA-1" /locus_tag="RD1_0419" /EC_number="1.8.4.-" /codon_start=1 /transl_table=11 /product="methionine-S-sulfoxide reductase, putative" /protein_id="YP_680821.1" /db_xref="GI:110677814" /db_xref="GeneID:4197987" /translation="MLNISSLKTYALAGMIALGLCVHGTQSHAAELETITVAGGCFWC VESDFERVTGVTEAVSGFMGGSVSNPTYKEVTSGGTGHYEAVQITFDPDVVSRDTLYA MFFRSVDPTDAGGQFCDRGDSYRTAIFAETPAQAAAAKAAKANAAAALGVPVVTPVLD ASTFYPAEAYHQDYYKGTRLVITRFGPKRQASAYKAYREACGRDARVRELWGAAAPFA GG" gene complement(409513..410385) /gene="rbsK" /locus_tag="RD1_0420" /db_xref="GeneID:4197988" CDS complement(409513..410385) /gene="rbsK" /locus_tag="RD1_0420" /EC_number="2.7.1.15" /codon_start=1 /transl_table=11 /product="ribokinase, putative" /protein_id="YP_680822.1" /db_xref="GI:110677815" /db_xref="GeneID:4197988" /translation="MAIYNLGSINADNVYRVPHLVGPGETLAATGFSQGLGGKGANMS VAAARAAARVFHIGAVGGDGAWASERLLEYGVDTRHIARVDEPTGHANICVDEAGEND IVVFAGANRAITDAMIGAALAEASPGDSFVTQNETSGQAFGAATARKLGLRVIYAAAP FDAAAVTAVMEHLDLLVLNAVEAAQLSAQTGSDIGDLPVSDIIVTIGSQGCKWLSRGA EPRLFPALDVTPVDTTGAGDTFTGYLIAGLDRGMPMAQAIDLATRAAALMVTRVGTAD VIPDLKEIQDMRLG" gene complement(410385..412640) /gene="tme" /locus_tag="RD1_0421" /db_xref="GeneID:4197989" CDS complement(410385..412640) /gene="tme" /locus_tag="RD1_0421" /EC_number="1.1.1.40" /note="NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate" /codon_start=1 /transl_table=11 /product="malic enzyme" /protein_id="YP_680823.1" /db_xref="GI:110677816" /db_xref="GeneID:4197989" /translation="MTKNRVTAEEALAFHLEPTPGKFEVTATVPMTTQRDLSLAYSPG VAVPCEAISQNPETAYDYTNKGNLVAVVSNGTAVLGLGNLGALASKPVMEGKAVLFKR FADVNSIDIELDTEDTDAFINAVKLMGPTFGGINLEDIKAPECFIIEQRLKDEMDIPV FHDDQHGTAVICAAGLINALHLSDKKIEDVRIVLNGAGAAGIACLELLKAMGARHQNC IMCDTKGVIYQGRAEGMNQWKSGHAVATEARTLEDAMKGADVFLGVSVKGAVTEAMIA SMADDPVIFAMANPDPEITPEEAHAVRADAIVATGRSDYPNQVNNVLGFPYLFRGALD IHARAINDEMKIACAHALAALAREDVPDEVALAYGKNLSFGRDYIIPTPFDPRLIHRV PPAVAKAGMDTGAARRPIIDMEAYELSLKTRMDPTASILRGINARARANQARMIFAEG DDARVLRAAVMYQRSGLGKALVVGRKEDVKDKLEQAGMPDAVREIEIVNAANTTHLDT YKDFLYSRLNRGGFDAQDIHRLAARDRHVFSALMLAHGHGDGLVTGATRKSAHIMDRI NHVFDADVKSGAAGITAILHKGRIVFIADTLVQEWPDEEDLANIAERAATVARNMGLE PRVAFVSFSTFGYPVSERATKMADAAKVLDARGVTFEYEGEMTVDVAMNTTVQASYPF SRLTGPANILVVPARHSASISVKLMQEMAGATVIGPILSGVDRSIQICSTGATANDIL NMAVLAACKVG" gene 412776..415412 /gene="mutS" /locus_tag="RD1_0423" /db_xref="GeneID:4197990" CDS 412776..415412 /gene="mutS" /locus_tag="RD1_0423" /note="This protein performs the mismatch recognition step during the DNA repair process" /codon_start=1 /transl_table=11 /product="DNA mismatch repair protein" /protein_id="YP_680824.1" /db_xref="GI:110677817" /db_xref="GeneID:4197990" /translation="MTVTPMMAQYLDLKAEYADALLFYRMGDFYEMFFEDAVAAAEAL DIALTKRGKHDGADIPMCGVPVHSAEGYLLTLIRKRFRVAVCEQMESPAEAKKRGSKS VVKRDVVRLVTPGTLTEETLLDARRNNYLTSFAQVRDAKALAWTDISTGAFHVMPLTA LKLGPELARLAPSELICSESAENDLREVAEDFGIALTGLARAAFDSTSAEQRICDLFG VETLDSYGSFTRAEVAAMGGIIQYLDITQKGKLPLLRPPQRETENRTIQIDAATRRNL ELTQALSGGRAGSLLAVIDRTITAAGGRLMSARIASPSRDLETITNRLDAVSFAQDHH DLCGALRDHLRKVPDLDRALSRLSLDRGGPRDMAAIRNGLTQSAILFETLGSHELPPL LADALNDLSRHDNLIDRLDATLVAEPPLLARDGGFIATGFDAELDEARSLRDEGRSVI ARMQQEFAALTGITSLKIKHNNVLGYFIETTATHAEKMLSPPMSETFIHRQTTANQVR FTTVELSELETKILNAGGRALEIEKRLYETLKSDILACSARIAQTASALAELDLTTAL ATLATTDGWVRPKVDDSRAFAIENGRHPVVENALRQQSGDPFIANDCDLSAEEDAAQI YLLTGPNMAGKSTYLRQNAIIALLAQMGSFVPASCAHIGLISQLFSRVGASDDLARGR STFMVEMVETAAILNQADDRALVILDEIGRGTATYDGLSIAWATLEHLHDVNKSRALF ATHYHEMTALAGKLPGVENATVTVKEWEGEVIFLHEVKMGAADRSYGVQVAQLAGLPP AVISRARAVLDMLEKGEREGGATQKTLIDDLPLFSVAPAPAPAPAKTSDVEARLAEIH PDELTPKQALELLYQLKEAANP" gene complement(415441..416004) /gene="grpE" /locus_tag="RD1_0424" /db_xref="GeneID:4197991" CDS complement(415441..416004) /gene="grpE" /locus_tag="RD1_0424" /codon_start=1 /transl_table=11 /product="GrpE protein HSP-70 cofactor, putative" /protein_id="YP_680825.1" /db_xref="GI:110677818" /db_xref="GeneID:4197991" /translation="MAEPKNEEFLDDIEEAEADAFAEEMEEIDEEALEVEQLRAERDQ LKDRFMRALADAENARKRSERDRREAENYGGSKLSRDMLPVYDNMKRALEAVTDEQRE QNAALLEGIELTMRELLSVFKKHGIEIVAPEVGDRFDPQYHQAMFEAPLPGTKAGDII QVSAEGFMLHDRLLRPAQVGVSSTPAS" gene complement(416014..417048) /gene="hrcA" /locus_tag="RD1_0425" /db_xref="GeneID:4197992" CDS complement(416014..417048) /gene="hrcA" /locus_tag="RD1_0425" /note="Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons" /codon_start=1 /transl_table=11 /product="heat-inducible transcription repressor" /protein_id="YP_680826.1" /db_xref="GI:110677819" /db_xref="GeneID:4197992" /translation="MNERSREVFRRVVEGYLADGAPVGSRTLTRDFSEKVSAATIRNT MQDLEYLGLLDSPHISAGRIPTQMGLRMFVDGLLEIGDPDEMDREKIDATLSSNSEDV SGLLDRVGSALSGVTQGASLVMTPKHEAPIKHIEFVSLSPDRALVVLVFADGHVENRL FSPPAGQTPSSMREAANFLNALIEGKTLSEVHGAIQKEIRNRRQEIDSLAQALVESGM AVWEREGDQNERLIVRGRSNLLTGDGEGEDFERIRLLFDDLERKRDIAEFLERTEEGE GVRIFIGSENKLFSLSGSSLVVSPYMNADRKIIGAVGVIGPTRLNYGRIVPIVNYTAQ LVGKLIADRS" gene 417192..417905 /gene="rph" /locus_tag="RD1_0426" /db_xref="GeneID:4197993" CDS 417192..417905 /gene="rph" /locus_tag="RD1_0426" /EC_number="2.7.7.56" /codon_start=1 /transl_table=11 /product="ribonuclease PH" /protein_id="YP_680827.1" /db_xref="GI:110677820" /db_xref="GeneID:4197993" /translation="MRPSGRELNEMRPVSIETGFTKHAEGSALIKIGDTHVLCTATIE DRVPPFIKGSGLGWVTAEYGMLPRATNTRMRRESTAGKQGGRTVEIQRLIGRSLRAGV DRVALGERQITVDCDVLQADGGTRCASITGGWVALRLAVNKLMKAGDVISDPLVDPVA AISCGIYAGQPVMDLDYPEDSEAGVDGNFIMTGSKQLIEVQMSAEGATFSRDQMNQLM DLAEKGVGELVAAQKAATA" gene 417902..418513 /locus_tag="RD1_0427" /db_xref="GeneID:4197994" CDS 417902..418513 /locus_tag="RD1_0427" /note="HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine" /codon_start=1 /transl_table=11 /product="putative deoxyribonucleotide triphosphate pyrophosphatase" /protein_id="YP_680828.1" /db_xref="GI:110677821" /db_xref="GeneID:4197994" /translation="MTRKFDGKRILIATHNAGKLEEMQQLFAPYGVDVVGAAEMGLAE PEETESTFIGNARIKARAAVEATGLPALADDSGIEVEALNNAPGVYTADWAETPNGRD FVMAMTKTHTKLEEINAPHPRRARFRATLVLAWPDGHDEVFDGRVNGTLVWPIRGKTG HGYDPMFQPDGHDMTFAEMDPAEKNRISHRADAFQKLIAGCFG" gene 418506..419663 /gene="hemN" /locus_tag="RD1_0428" /db_xref="GeneID:4197995" CDS 418506..419663 /gene="hemN" /locus_tag="RD1_0428" /EC_number="1.3.99.22" /note="catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III" /codon_start=1 /transl_table=11 /product="coproporphyrinogen III oxidase" /protein_id="YP_680829.1" /db_xref="GI:110677822" /db_xref="GeneID:4197995" /translation="MAEDWEHGGFGLYIHWPYCEAKCPYCDFNSHVVRRIDQTAWRDA YLTELRRTARETQGRVLRSVFFGGGTPSLMDPDTVAVVISEVRKLWPVANDLEITLEA NPSSVEAGRFAAFRQGGVTRISMGIQALNDDDLRRLGRIHTVTEAQTAFDIARSEFDR VSFDLIYARQGQSLHAWEQELKQALEMAVDHLSLYQLTIEQGTAFGDRYNAGKLRGLP DEDLSADLYTLTQDLCGAAGMPGYEVSNHARDGAHSRHNLIYWRYGDYLGIGPGAHGR LTVNGQRYATECYSNPAKWLAAVGDEHTEKPRGPLTYQDQASEFLLMGLRLKEGIDTH RYETLAGKALDSHAVSELADLGMVSTTEDRITVSDQGFIILNAVIARLLET" gene complement(419660..420556) /gene="parB" /locus_tag="RD1_0429" /db_xref="GeneID:4197996" CDS complement(419660..420556) /gene="parB" /locus_tag="RD1_0429" /codon_start=1 /transl_table=11 /product="chromosome partitioning protein parB" /protein_id="YP_680830.1" /db_xref="GI:110677823" /db_xref="GeneID:4197996" /translation="MAVGTDRKRGLGRGLSALMSDVAEAESPPAPGVPMSNQKIPIDQ ISPNPDQPRKQFTDSDLDDLTASIKEKGVIQPLIVRKTGVDQFEIVAGERRWRAAQRA QLHELPVVIREFTDVEVLEVAIIENIQRADLNPIEEAAGYRQLMDRFGHTQEKMAEAL GKSRSHIANLLRLLTLPDPVLQMVREGGLSAGHARALIPAQDPLKLAQQIVKGGLSVR AAEALVKKERSSSDDAPRPAAKPASAEKDADTKALEGDLSASLGMKVELTHKPGHESG HMTLHYKSLDDLDELCRILSGA" gene complement(420566..421375) /gene="parA" /locus_tag="RD1_0430" /db_xref="GeneID:4197997" CDS complement(420566..421375) /gene="parA" /locus_tag="RD1_0430" /codon_start=1 /transl_table=11 /product="chromosome partitioning protein ParA" /protein_id="YP_680831.1" /db_xref="GI:110677824" /db_xref="GeneID:4197997" /translation="MSDLSRPFGPKIIAVANQKGGVGKTTTTINLAAALAEAGRRVLV VDLDPQGNASTGLGIEVEDRKYTTYDILLGDVDIKDVVLQTVTPNLLIVPATVDLSSA DLELMSSEKRSFLLHDALRQIEMDGFNLDYVLIDCPPSLNLLTVNAMIAAHSVLVPLQ SEFFALEGLSQLMLTIREVRQTGNKDLRIEGILLTMYDKRNNLSLQVEQDARDNLGDM VFSTRIPRNVRVSEAPSFAMPVLTYDTMSKGAQAYRALAKELIQKHRVKVA" gene complement(421368..421967) /gene="gidB" /locus_tag="RD1_0431" /db_xref="GeneID:4197998" CDS complement(421368..421967) /gene="gidB" /locus_tag="RD1_0431" /EC_number="2.1.-.-" /codon_start=1 /transl_table=11 /product="methyltransferase GidB" /protein_id="YP_680832.1" /db_xref="GI:110677825" /db_xref="GeneID:4197998" /translation="MDASTVSRETMHALQMYHDLLLKWNARINLISKSSIEDVWSRHI WDSAQVVDCVAKAKTWVDLGSGGGMPGIVVAIFAKNIDPDRRVILVESDQRKAAFLRT VIRELSLNARVIVERIEDVAPLRADVVSARALADLSVLLSFAQRHLSAQGTALFMKGQ SWEKEVSSAQETWSFDLKAHRSKTSPAAAILEIKEIQRV" gene complement(421979..423850) /gene="gidA" /locus_tag="RD1_0432" /db_xref="GeneID:4197999" CDS complement(421979..423850) /gene="gidA" /locus_tag="RD1_0432" /note="GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs" /codon_start=1 /transl_table=11 /product="tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA" /protein_id="YP_680833.1" /db_xref="GI:110677826" /db_xref="GeneID:4197999" /translation="MFHVKHFDVLVIGGGHAGTEAAHAAARMGSQTGLITMSRSGIGV MSCNPAIGGLGKGHLVREIDALDGVMGRVADQAGIQFRLLNRRKGPAVQGPRAQSDRA IYHNRMLEATDQQQNLDIIVGEAVDFVMDGERVIGVVLQDDAEILAKTVILTTGTFLR GVIHIGDVSRSGGRMGDKASVRLADRIDSFGLPMGRLKTGTPPRLSSKSINWDVLEEQ PGDDEPTLFSFLSKGVSARQVSCGITHTNVRTHDIIRDNITRSAMYGGHIDGVGPRYC PSIEDKIIRFADKESHQIFLEPEGLNTDAVYPNGISTSLPQDVQSEYVHSIVGLEKAI ILQPGYAIEYDYVDPRALDSSLSVLSVPGLYLAGQINGTTGYEEAAAQGLVAGLNASL EARGSDPITFSRSDSYIGVMIDDLTTRGVMEPYRMFTSRAEFRLSLRADNADQRLTPI GLALGCVSDERKQAFEVKIEALDRARRLLTESSYTPKQAGEAGISVSHDGSRRTAMQL LAFPNTSFKDLSLLDPVFDGIDVETQQQMEREALYATYIERQQKDVDLLKKDEGHKIP ADFDYDQLSGLSNELKSKLNSTRPTSLAQVGRIDGMTPAALTLILAKLRQSSKKRSA" gene complement(423855..425141) /gene="trmE" /locus_tag="RD1_0433" /db_xref="GeneID:4198000" CDS complement(423855..425141) /gene="trmE" /locus_tag="RD1_0433" /note="in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerizat" /codon_start=1 /transl_table=11 /product="tRNA modification GTPase TrmE" /protein_id="YP_680834.1" /db_xref="GI:110677827" /db_xref="GeneID:4198000" /translation="MDTVFALGSAQGRAGVSVIRLSGPAAWAVAETICGSLPDPRKSA VRVLRAQDGSVIDQALVLAFKAPHSFTGEDVVEFHVHGSIAVVRTVLDALSDQDVARL AEAGEFTRRALENGKLDLSQVEGLADLIDAETEAQRRQAVRVLTGALGEKVEVWRSKL IRAAALIEATIDFADEDVPVDVTPEVTSLLEDVSSDVRTEVAGTHVAERIRSGFEIAL VGAPNAGKSTLLNKLAGRDAAITSEIAGTTRDVIEVRMDLGGLPVTFLDTAGLRQSAD EIETIGIERAIKRAQEADLRVFLSGPDERLLIEPLEDDIRLTPKVDLAPGSQTGISGK TGQGIPELLEKIRSVFSERVSAVGLATHERHRLAMQRALEDLDNSFEALLRGPEFYDI TAQELRSAIRALETLVGRIDAENLLDEIFSSFCLGK" gene complement(425171..426439) /gene="rho" /locus_tag="RD1_0434" /db_xref="GeneID:4198001" CDS complement(425171..426439) /gene="rho" /locus_tag="RD1_0434" /note="An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes" /codon_start=1 /transl_table=11 /product="transcription termination factor Rho" /protein_id="YP_680835.1" /db_xref="GI:110677828" /db_xref="GeneID:4198001" /translation="MTETLNLADLKRKSPKDLLSMAEDLEIENASTMRKGEMMFQILR ERADEGWEVSGDGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRKYSLRTGDTIE GLIKAPDDNERYFALLGVTQINFEDPEKARHKVAFENLTPLYPDERLTMETDDPTTKD RSARIIDLVAPIGKGQRSLIVAPPRTGKTVLLQNIANSIERNHPECYLIVLLIDERPE EVTDMQRSVKGEVVSSTFDEPATRHVAVSDMVIEKAKRLVEHKRDVVILLDSITRLGR AFNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEV IFEEFKGTGNSEIVLDRKIADKRVFPAMDILKSGTRKEDLLVDKIDLQKTFVLRRILN PMGTTDAIEFLISKLKQTKTNSDFFDSMNT" gene complement(426595..427044) /locus_tag="RD1_0435" /db_xref="GeneID:4198330" CDS complement(426595..427044) /locus_tag="RD1_0435" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680836.1" /db_xref="GI:110677829" /db_xref="GeneID:4198330" /translation="MSDLLAIGYPWIKSFHIMSVIAWMAGLFYLPRLYVYHTEQVGQS GDTHVLFQTMELKLLRVIMNPAMIATWVFGICLVLTPGIVDWSSIWPWLKFLGVFGMT AFHMWLAKKRKVFAAGENQLTGKQYRMMNEVPTILMVIIVISVVVKF" gene 427268..427366 /locus_tag="RD1_0436" /db_xref="GeneID:4198331" CDS 427268..427366 /locus_tag="RD1_0436" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680837.1" /db_xref="GI:110677830" /db_xref="GeneID:4198331" /translation="MDQSAEQIYTGIDLILLPGWTVSLSGHETIVL" gene 427445..428044 /gene="maf" /locus_tag="RD1_0437" /db_xref="GeneID:4198332" CDS 427445..428044 /gene="maf" /locus_tag="RD1_0437" /codon_start=1 /transl_table=11 /product="septum formation protein, putative" /protein_id="YP_680838.1" /db_xref="GI:110677831" /db_xref="GeneID:4198332" /translation="MPQPLILASTSEIRAKMLSNAGVPHTTSGARIDEEMVKEALLAE QASPRDIADTLAEMKARKISDKTPGAIVLGCDQVLDHRGVLLSKPVDSHDALTQLQAL RNDRHTLLSAAVICEDGKPVWRHVGVVRLRMHDVSDAYLQDYVARNWDSIRHAVGAYK LEEEGVRLFSRIDGDYFTVLGLPLLELLSYLALRGDLPR" gene 428041..428874 /gene="aroE" /locus_tag="RD1_0438" /db_xref="GeneID:4198333" CDS 428041..428874 /gene="aroE" /locus_tag="RD1_0438" /EC_number="1.1.1.25" /codon_start=1 /transl_table=11 /product="shikimate 5-dehydrogenase, putative" /protein_id="YP_680839.1" /db_xref="GI:110677832" /db_xref="GeneID:4198333" /translation="MSMTKIPLAGVMGAPIAHSKSPQLHRHWLETYGISGFYVPMEVK AADVEHVLRTLPKMGFVGLNVTLPHKEAVLKLADQITDRARLIGAANTLTFGKDGEIH ADNTDGYGFLENLRSGATDWTPSQGPAVVLGAGGAARAVIVALLDAGVPEIILTNRTR ARSDQLQSDFGNRVRVMDWTQISGVLHEAQLLVNTTSLGMVGKPEMEASLDGLQAHTT VTDLVYNPLKTRLLEVAEEKGCVTVDGLGMLLHQGVPGFERWFGRRPDVTDATRAAVL G" gene 428871..429464 /gene="coaE" /locus_tag="RD1_0439" /db_xref="GeneID:4198334" CDS 428871..429464 /gene="coaE" /locus_tag="RD1_0439" /EC_number="2.7.1.24" /codon_start=1 /transl_table=11 /product="dephospho-CoA kinase, putative" /protein_id="YP_680840.1" /db_xref="GI:110677833" /db_xref="GeneID:4198334" /translation="MTFKLGLTGSIGMGKSTTAQLFVELGCALWDADAAVHRLYVEGG AAVAPIGAIYPTVIHKNSVSRDALRDLIQNDPSVLRRIEKIVHPLVGADRTEFLDQTK SDITVLDIPLLFETGADSDMDAVACVRTTAEEQERRVLARGKMTAKQFQQIRHKQMPN AEKCARADFVIETDTLEHARAQVQTITEQIRRAIADA" gene 429457..430143 /gene="dnaQ" /locus_tag="RD1_0440" /db_xref="GeneID:4198335" CDS 429457..430143 /gene="dnaQ" /locus_tag="RD1_0440" /EC_number="2.7.7.7" /codon_start=1 /transl_table=11 /product="DNA polymerase III, epsilon subunit" /protein_id="YP_680841.1" /db_xref="GI:110677834" /db_xref="GeneID:4198335" /translation="MREIVLDTETTGFDPESGDRIVEIGAVELMGHVATGRTYHQYIN PERSMPEEAFQVHGLGDDFLRDKPKFAEVGQAFLDFIGDAKLVIHNAAFDIKFLNAEL GWINLPKIPWEQAIDTLDIARKRFPGSPASLDALCRRFGIDNTSRTLHGALLDSEILA EVYLELIGGRQPDFGLSNIPQKSAGDTSVDWTPRPRPTPLPSRITEEEAAAHADFVAK LGDDAVWLKT" gene complement(430146..430646) /gene="secB" /locus_tag="RD1_0441" /db_xref="GeneID:4198336" CDS complement(430146..430646) /gene="secB" /locus_tag="RD1_0441" /note="molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA" /codon_start=1 /transl_table=11 /product="preprotein translocase subunit SecB" /protein_id="YP_680842.1" /db_xref="GI:110677835" /db_xref="GeneID:4198336" /translation="MAEEEEAKTEANGQQQAPQMRVLGQFIRDMSFENIMAQKGAPSD AQPDVQVQVNLDAKKRTADNQYESAIKLNVTSKVKDGDATLFVLELDYVGIFHVDNVP DEQLHPFLLIECPRMIFPFLRRIVSDITRDGGFPPLNLENIDFLSLYRNELARRQSSE APKMDA" gene complement(430700..431191) /gene="fxsA" /locus_tag="RD1_0443" /db_xref="GeneID:4198337" CDS complement(430700..431191) /gene="fxsA" /locus_tag="RD1_0443" /codon_start=1 /transl_table=11 /product="FxsA protein, putative" /protein_id="YP_680843.1" /db_xref="GI:110677836" /db_xref="GeneID:4198337" /translation="MWLFIAFLAIPLLEIALFIQIGGAIGLGWTLATVVVTAVLGTFL VRNQGALALGQVKSSFNQMQDPTEPLAHGAMILFSGALLLTPGFFTDTIGFLLLIPAV RASAFRAIKARVSIASFEAANHTHRPRRPGHGQPDDVIDGDYTEVKTEADQNKRPSGW TDH" gene 431296..431958 /locus_tag="RD1_0444" /db_xref="GeneID:4198338" CDS 431296..431958 /locus_tag="RD1_0444" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680844.1" /db_xref="GI:110677837" /db_xref="GeneID:4198338" /translation="MNSSPLIQLLVLAGIAVFLIFRLKNVLGTRDGFEPGPAQAPTSD RSPTRDFEVIEGGPDLDITDHVDEHSDAAEALANMKRLEPGFNVTEFLGGARGAYEMI VMGYENGELADIQPFLAEDIYESFVDGVAAREDQGLTIEANFIGVRELKLIDATLDPD TNEAELTIRFTAELTSAVRNSEGEIIEGSLTDVKRQKDTWSFARPMGSDDPNWILVST DG" gene 432097..432687 /locus_tag="RD1_0446" /db_xref="GeneID:4198339" CDS 432097..432687 /locus_tag="RD1_0446" /codon_start=1 /transl_table=11 /product="Smr domain protein" /protein_id="YP_680845.1" /db_xref="GI:110677838" /db_xref="GeneID:4198339" /translation="MTRRRLKPDEVELWQKVTENTQALRQTQTFDPEAYAPQHVKRDV HLPVEIKLDGKTPPKPAARKIEYDLAPSLPDRLNKAPVQMDRKTFAKMNRGKLKPEGR IDLHGMTLDRAHTALSRFILSSHGAGKRLVLVITGKGKNRDEGGPIPVRHGVLRHQAP QWLATPPLSSVVMQVSQAHVSHGGGGAYYVYLRRGR" gene complement(432684..433901) /locus_tag="RD1_0447" /db_xref="GeneID:4198340" CDS complement(432684..433901) /locus_tag="RD1_0447" /codon_start=1 /transl_table=11 /product="transmembrane transport protein, putative" /protein_id="YP_680846.1" /db_xref="GI:110677839" /db_xref="GeneID:4198340" /translation="MGYIRFVIENRLFLLAGFLLCFTSSFGQTYFISLFAGEIKDSFS LTDGDWGAIYTVGTTLSAITIIWAGALTDRFRVRHLSFGVMVLLALACMAMAFVPSGF LLVIVVYALRLMGQGMMSQLGAVAMSRWFVAARGRAISLASMGFAVGQAVLPIIFVAL LLQFDWRNLWMLAAVCIIVLIPVMQLLLRQERTPQSMAETAQSLGMQGKHWTRGELLR HPLFYMMIPLILGPAAWGTALFFQQVHLTEVKGWSLVSFVALMPIYTVSTIAFTFVTG WAVDRFGVKWVVPFQMLPFALSFAVLAFADTIWMAGVGLVIFGMGQGMQGTATTAFWA VFYGTKHLGAIKAAGAALMVFGSAIGPGVTGAFIDWGVDFPEQMIPIAVFYVAGALLA GLGILRYQRDLPG" gene complement(433940..435247) /gene="hslU" /locus_tag="RD1_0448" /db_xref="GeneID:4198341" CDS complement(433940..435247) /gene="hslU" /locus_tag="RD1_0448" /note="heat shock protein involved in degradation of misfolded proteins" /codon_start=1 /transl_table=11 /product="ATP-dependent protease ATP-binding subunit" /protein_id="YP_680847.1" /db_xref="GI:110677840" /db_xref="GeneID:4198341" /translation="MTDLTPREIVSELDRFIIGQNDAKRAVAVALRNRWRRKQLADDL RDEVYPKNILMIGPTGVGKTEISRRLAKLARAPFLKVEATKFTEVGYVGRDVEQIIRD LVDNAISMTRDHMRDDVKANAHQAAEERVITAIAGEDARESTREMFRKKLKAGDLDDT VIELDVADTSSPFPMMDIPGQPGGNMGMMNLGDIFGKALGGRTTRKKMTVSQSYDILI GEEADKLLDDETVNRAAIEAVEQNGIVFLDEIDKVCAKSDTRGGDVSREGVQRDLLPL IEGTTVSTKHGPIKTDHILFIASGAFHIAKPSDLLPELQGRLPIRVELRALTEEDFVR ILTETDNALTLQYTALMGTEEVTVSFTEDGIAALAKIAAEVNQSVENIGARRLYTVME RVFEELSFSAPDRAGEEIIVDAAFVDENLGALAKSTDVSRYVL" gene complement(435339..436451) /locus_tag="RD1_0449" /db_xref="GeneID:4198342" CDS complement(435339..436451) /locus_tag="RD1_0449" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680848.1" /db_xref="GI:110677841" /db_xref="GeneID:4198342" /translation="MRLYQREPDGRNNQRMIGKDDIRAAVGAGILSEAQAASLTSLAD SRRGARENLDPGDEPFELFRGFNEVFIVIGLGILALGWIGIVSFGALEYISSVQTYMI VTSVLGAVVIWLLSEYFIRRRRMVAPAIALSLMFGGNALYGFISGFGELFMLAQEDYS SLPLPLALSTLALLLFWFRFRVPFALAVIALCAFLVSVLIAGNSAGAPEDLRSMFLLS AGGPFAFITLGLGLIVFVIAMVFDMSDPHRVTRRSANGFWLHVVAAPALVNTIALSLL TETAGGSNLMLLLVLTLIALIAIIIDRRSFLIAAIGYIVILSNTVFDGRQAVFTVFSL GVFLVFLGARWERIRAFLMKRMPGFIPRHRLPPAGG" gene complement(436403..436960) /gene="hslV" /locus_tag="RD1_0450" /db_xref="GeneID:4198343" CDS complement(436403..436960) /gene="hslV" /locus_tag="RD1_0450" /EC_number="3.4.25.-" /note="heat shock protein involved in degradation of misfolded proteins" /codon_start=1 /transl_table=11 /product="ATP-dependent protease peptidase subunit" /protein_id="YP_680849.1" /db_xref="GI:110677842" /db_xref="GeneID:4198343" /translation="MARDEFPGWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARK VRRLSPGGFDVVAGFAGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQ KLEAMLIVSDGKDIFVITGAGDVLEPEHDVTAIGSGGNYALAAARGMMDSPRSAEEVA RDAMAIAADICVYTNGNLTVETISA" gene complement(437073..437393) /gene="trxA" /locus_tag="RD1_0451" /db_xref="GeneID:4198344" CDS complement(437073..437393) /gene="trxA" /locus_tag="RD1_0451" /codon_start=1 /transl_table=11 /product="thioredoxin" /protein_id="YP_680850.1" /db_xref="GI:110677843" /db_xref="GeneID:4198344" /translation="MATLAVTDDTFDAEVKNSDIPVVVDFWAEWCGPCKQIGPSLEEL SAEMDGKVKIVKVNVDENPNSPAQMGVRGIPALFIFKDGQVVSNMAGAKPKAALQGWI EDNI" gene complement(437431..440808) /locus_tag="RD1_0452" /db_xref="GeneID:4198345" CDS complement(437431..440808) /locus_tag="RD1_0452" /codon_start=1 /transl_table=11 /product="ATP-dependent DNA nuclease, putative" /protein_id="YP_680851.1" /db_xref="GI:110677844" /db_xref="GeneID:4198345" /translation="MTPRHPATQAQVDAARPDASTWLAANAGSGKTRVLTDRVARLLL DKVAPEHILCLTYTKAAASEMQNRLFKRLGEWAMLQDDALAEALRDLGVETAVDAEKL RKARTLFARAIETPGGLKIQTIHSFCASLLRRFPLEARVSPQFTEIEERAADLLRAEI IDTMAEGPDAAVIADLAQHYTGENFVKLAKAVVQHKDGFRTPLSWEESLALFDQPADL TAKHIEDQVFLGDEAALFDTLIPPMQAKGGNDAKTAVKLKKISGLNFSALPALEEIFL TGRKAKPPFRAKIGTLPTKPTQDVVSDAMPALDDFMCRVETARDARVGLLAAQKTYAL HRFAGSFLPLYEEQKTLRGWLDFDDLIDRARALLSDEDVAAWVLFRIDGGIDHILVDE AQDTSPAQWDVIRKLAAEFTSGEGARQEVQRTVFVVGDKKQSIYSFQGADPREFDRMQ AEFASKIEAAEQLFQNKTLAFSFRSASAILGVVDRTFDGLTDAGFTTDEQHIAFKQTL PGRVDIWPVVEPQPSEEDRAWHDPIDRKAAHHHSVILAERVATQIKAMIAHDTIPDEK RSDGKITRRPVQAGDFLILVQRRSVLFTEIIRACKNKDLDIAGADRLKVGGELAVRDL AALLSFLAVPEDSLSLASTLRSPLFGWSEKELFQLAHHREHDHLWQALRMRSDAYPET LKVLRDLRANVDFLRPYDLIERILTRHNGRRNLLARLGVEAEDGINALLSQALAYERN AVPSLTGFLVWMETDDLEIKRQIDSASNQIRVMTVHGAKGLEAPIVILPDSGKRNNPV RDDIIILDDKPVWKTPANDTPGAMAAALDEIAAAQAAERLRLLYVALTRAEKWLIVAA AGELSKQNDTWYQRVDAAVDAAGARLVDMHGLAVKRHQKGDWEALPLSEANQNTTVQA TLDPCFTTRAPARAPLRETVSPSDLGGAKALPGEAGQDEEAAKAYGTSVHLFLEHLSA ADPSDWPALVDVLSDNGDPDLLRAASEAKTVLQDPNLAHLFTPDSLAEVAVTAEFGSA RLHGIIDRLVVSDTAVLAVDFKTNQTVPSQPATCPEGILRQMGAYTHALKQVYPDRKI ETAILWTRNCTLMHLPHDIVTQALQNTLYLDDGATPS" gene complement(440805..443762) /locus_tag="RD1_0453" /db_xref="GeneID:4198346" CDS complement(440805..443762) /locus_tag="RD1_0453" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680852.1" /db_xref="GI:110677845" /db_xref="GeneID:4198346" /translation="MFEHSDTPRVFGLAPGVDFPKGLIEGLLARVAQGAPEDLARVQL IVNTSRMQRRLRSLFDAGPARLLPKIHLVTELDRLAPGLAVPPAVKPLQRRLELIALV ARLIEQQKGLAPRASLYDLTDSLAALMDEMQGEGVTAETINSLDVSDISGHWQRTQTF IRIVQDYLAQTTTTPDKEAQQRQFVCALAERWAVEPLRHPVILAGSTGSRGTTMLLME AIARLPQGALILPGFDFDMPHQQWLHLDDALLSEDHPQYRFYKLMQNIGVGRSDITPW HDAPPPSPARNALVSLSLRPAPVTDAWLTEGPKLHDLNKATDQITLLEAPSPRSEALA IALRLRKAVEEGQKAAVITPDRMLTRQITAALDQFDILPDDSAGAPLHLSPPGRFLRH VAALFHRRLDAEALLTLLKHPLTHSGSNRAAHILNTQRLELRIRRDGLPYPDADSIGQ ALAGISPNADHQRGVDAWGAWVGQTFAAMYSTTEQPLSHWAQTHIALAEAISCGLDGQ DTGELWKQKAGQEALKVMTNLAELAHHGGPMTASDYANLVGALLSEGEVRDRDAPHPD IMIWGTLEARVQGADLVILAGLNDGTWPEAPAPDPWLNRALRHQAGLLLPERRIGLAA HDYQQAIAAPEVWLTRSIRSDDAETVASRWVNRLCNLLSGLKGQDGPALLEAMQDRGQ YWLDQTVALEKVEPATPAARPAPRPPLAARPKRLAVTDIKHLIRDPYTIYAKHVLRLR KLGPLVQNPDALLRGTVSHDVMEKFVRQTLRDPATLNADHLIEIARDVLSRDVPWPAA RALWLARLTRISEWFVMNERARQHIGTPVVFEDDALGKMVWPDIEFTLTARADRIDQT EDGDALIYDYKTGSPPTVKQQTLFDKQLLIEAAMVEQGAFEKLGPHHVAQATFIGLGS NPVEVPAPLDSEPPAQILAELRMLVLAYKEMDQGFTARRMMEKDQYGSDYDLLSRYGE WDITQDPVPEELS" gene complement(443755..444438) /locus_tag="RD1_0454" /db_xref="GeneID:4198347" CDS complement(443755..444438) /locus_tag="RD1_0454" /EC_number="2.7.7.13" /codon_start=1 /transl_table=11 /product="nucleotidyltransferase family protein, putative" /protein_id="YP_680853.1" /db_xref="GI:110677846" /db_xref="GeneID:4198347" /translation="MGWSVMLFAAGFGNRMKHLTADRPKPMVEVAGRPLIDHARALTD ELPAERVVANLHYKADILQAHLHGTNVQTIVETPDILETGGGLRNALPLLGSGPVMTL NTDAIWKGVNPLDQLQKEWDPDRMDGLLMCIPPQNAVGYDGPGNFLIGANGRIERGDG SIYSGAQIIKTERLADIDRPSFSLNILWDMLMAENRLYAMEYAGLWCDVGHPQGVTNA EALLGYRHV" gene complement(444423..445442) /locus_tag="RD1_0455" /db_xref="GeneID:4198348" CDS complement(444423..445442) /locus_tag="RD1_0455" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680854.1" /db_xref="GI:110677847" /db_xref="GeneID:4198348" /translation="MTRAAQAKAFIAQAGWQNATVTPLAGDASNRRYDRLTRANGETS VLMDAPPANNTNVSAFVQIATYLRTLGLSAPRIMHEDSDAGFLLIEDLGDTLFTHQIA DNPALEELLYETSVDVLTHLHQNAPPKLGSYASPVTLPLAALAFDWYQLGATGTVDND AKRHFMSMLEPLLAQYDTDLTVLIQRDYHAENLLWLPERNGVARVGLLDFQDAVLGHR SYDLMSILQDARRDVDPQLETDMKARFVAQNALDPQAFDAAYAVFGLQRNMRILGVFS RLCMRDAKSHYVDFIPRVWGHLMTNLNHPMLEPAAELITASLPEPTCDICATLTSKSG QWAGR" gene complement(445439..445915) /locus_tag="RD1_0456" /db_xref="GeneID:4198138" CDS complement(445439..445915) /locus_tag="RD1_0456" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680855.1" /db_xref="GI:110677848" /db_xref="GeneID:4198138" /translation="MVCTPRTVTVGSAEETAQLAVALGVRLRPGDTLLLDGAVGAGKT HFARHMIQSLLREPEDVPSPTFTLVQTYDTSSGSLWHADLYRLSSVYEIEELGLSEAF DTAICLIEWPDRLGQLTPNDALFLRFTQGATDDSRIVTARWTDPKWNAPLQDWNAL" gene complement(445966..447444) /locus_tag="RD1_0457" /db_xref="GeneID:4198139" CDS complement(445966..447444) /locus_tag="RD1_0457" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680856.1" /db_xref="GI:110677849" /db_xref="GeneID:4198139" /translation="MLSKQQQAAPGTSLQPSDSENRVSFLFEDENLEHASETAAKLYK LIPGHDDWTGMRERLVNRFPNLPERPLAAQSGQTTVPARDIEDAAILEVTRAGAFTRI NMVENEVQTSAQSLRFKNLQHELEDLRRASDTTPHAIWQVDSEGSVTWHNAAYTGLYN RLHQKEPDPVKPVFDVAPSFHEKSGRQRVSAQLPDNEHVDWYDVTVASVGDIMIFHAI DVNAVVKSEAAQRNFVQTLAKTFAQLSIGLAIFDRNGQLALFNPALIDLTELPADFLS GRPTLMSFFDRIRENRRMPEPKNYHSWRQQITDVIAAATDGRYQETWTLETGQTYRVS GRPHPDGAIAFLIEDISAEVSVTRNFRAELELGQSLMDTFDEALVVFSSTGVLTFCNL AYRELWGLDPDNSFADVTINDSVRAWQEDCAPNKLWDGLIDFVLDFGEKTSWDMTARL HSGAEVKCTVSRISSGATVVRFALLEQAGAPALKQPSNTQSD" gene complement(447622..449000) /gene="regB" /locus_tag="RD1_0459" /pseudo /db_xref="GeneID:4198140" misc_feature complement(447622..449000) /gene="regB" /locus_tag="RD1_0459" /note="sensor histidine kinase RegB" /pseudo gene 449092..449715 /gene="senC" /locus_tag="RD1_0460" /db_xref="GeneID:4198141" CDS 449092..449715 /gene="senC" /locus_tag="RD1_0460" /codon_start=1 /transl_table=11 /product="SenC protein" /protein_id="YP_680857.1" /db_xref="GI:110677850" /db_xref="GeneID:4198141" /translation="MNTRFIALISVAGVVGVLGGLWLATQSSKSDDQFAQCRSSTVAG GAGALGGPFELVNAQGETVTDADVITEPSILYFGYTFCPDVCPLDVARNAVAVEVLEE NGMSVTPVFISIDPKRDTPEVVGDFAANMHERMIGLTGSPEQVKAASTAYRTYYKAHE GDEDYYLVDHSTFSYLVLPEHGFVEFFRREVAPEQMAETVACFVENA" gene 449812..450366 /gene="regA" /locus_tag="RD1_0461" /db_xref="GeneID:4198142" CDS 449812..450366 /gene="regA" /locus_tag="RD1_0461" /codon_start=1 /transl_table=11 /product="photosynthetic apparatus regulatory protein" /protein_id="YP_680858.1" /db_xref="GI:110677851" /db_xref="GeneID:4198142" /translation="MPDTNPIELGEDKSILLLDDDEPFLRRLAKAMEKRGFQVETAGS VAAGRAIATARPPAFAVVDLRLEDGNGLDVVEVLREKRPDTRVVVLTGYGAIATAVAA VKIGAVDYLSKPADATDIVNALLATGDDLPPPPENPMSADRVRWEHIQRVYELCDRNV SETARRLNMHRRTLQRILAKRSPR" gene complement(450480..451067) /locus_tag="RD1_0463" /db_xref="GeneID:4198143" CDS complement(450480..451067) /locus_tag="RD1_0463" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680859.1" /db_xref="GI:110677852" /db_xref="GeneID:4198143" /translation="MKRAWQRMLSGRRLDLLDPTPVDVEIEDIARGLAFVARWNGQTS GAHAYSVAEHSLLVETLFTRIADKSPAKWRLAALLHDAPEYVIGDMISPVKAAVGPGY EALDERLTAAIHLRFGLPAAIPVAVKRQIKKADKISAWMEATQIAGFSETEASKFFGT PDHKIMQGLEITLRPPAETRDAFTARHNELLAAMP" gene complement(451064..452053) /gene="rfaI" /locus_tag="RD1_0464" /db_xref="GeneID:4198144" CDS complement(451064..452053) /gene="rfaI" /locus_tag="RD1_0464" /codon_start=1 /transl_table=11 /product="lipopolysaccharide 1,3-galactosyltransferase, putative" /protein_id="YP_680860.1" /db_xref="GI:110677853" /db_xref="GeneID:4198144" /translation="MSTAPAESFHVRLTASRPARHKRAIVFCCDQNYLVFAAHAAAQI ASLVEKPEFDICICYGHQAVVLPDSLAGLGIRLCHVDVGDVFEGLRLDKGKTHDVYLR IALPTAFAGEYDKILYLDSDIFVQGGDFNALFDIDVAPHCIASVRDNVQWRTPKRQNK RNTIKGIPPSAYFNAGVMLMDVQAYTEQELMRRCVEFGRARRRDLKRHDQNLYNAVLQ NDWAEISPVWNWQYSWSTRLFAVFAYPNIIHFIGPAKPWKDESGQFEPRFADSFDRFI RTHFSGSRQVETGGRRLAPDSMKMTKMLIKHLITARKIAHYLARFPNELTVHR" gene 452305..453693 /gene="ahcY" /locus_tag="RD1_0465" /db_xref="GeneID:4198145" CDS 452305..453693 /gene="ahcY" /locus_tag="RD1_0465" /EC_number="3.3.1.1" /note="catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine" /codon_start=1 /transl_table=11 /product="S-adenosyl-L-homocysteine hydrolase" /protein_id="YP_680861.1" /db_xref="GI:110677854" /db_xref="GeneID:4198145" /translation="MTKDFIVKDIALAEFGRKELDIAETEMPGLMALRAEYGDSKPLA GARIVGSLHMTIQTAVLIETLVALGADVRWASCNIFSTQDHAAAAIAAGGTPVFAIKG QSLEEHWDYLDRSFMFEDGPNLILDDGGDATLYVLLGARAEAGEEIIPVPTSEEEEAI KAQIKKRMAASPGWFTKVRDQIKGVSEETTTGVHRLYDLVKQGQLPFPAINVNDSVTK SKFDNKYGCKESLVDGIRRATDTMMAGKVAVVMGYGDVGKGSAASLRGAGARVKVTEV DPICALQAAMDGFEVVLLEDVVGSADIFITTTGNKDVIRIEHMRAMKDMAIVGNIGHF DNEIQVAALKNHKWTNIKEQVDMIEMPNGNRLILLSEGRLLNLGNATGHPSFVMSASF TNQVLAQIELWTRADAYDNEVYILPKHLDEKVARLHLDRIGVKLTPLDPEQAAYIGVK PEGPFKPEHYRY" gene 453868..454233 /locus_tag="RD1_0466" /db_xref="GeneID:4198146" CDS 453868..454233 /locus_tag="RD1_0466" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680862.1" /db_xref="GI:110677855" /db_xref="GeneID:4198146" /translation="MNQRGTFIMGKRDDLIAQYAEDLKNKCGMEPDMDLLTKVTIGCG PAIYNADASTVASSQPSELETVKEKFLMKKLGLADGPELMEGINKVIETYGKSERNKY RAVVYYMLTKHFGKEAVYA" gene complement(454710..455132) /locus_tag="RD1_0467" /db_xref="GeneID:4198147" CDS complement(454710..455132) /locus_tag="RD1_0467" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680863.1" /db_xref="GI:110677856" /db_xref="GeneID:4198147" /translation="MAYWLFKSEPSAWSWDDQVAKGEAGEEWDGVRNYQARNFMREMK VGDLGFFYHSQKEKSIVGIVEVIAEAHPDSTTQDDRWECVDIKAVRAVKTPVSLEDVK QDDRLADMALLKMSRLSVQPVRPEEWAIICEMAGVAEE" gene complement(455132..455404) /locus_tag="RD1_0468" /db_xref="GeneID:4198148" CDS complement(455132..455404) /locus_tag="RD1_0468" /codon_start=1 /transl_table=11 /product="YCII-related domain protein" /protein_id="YP_680864.1" /db_xref="GI:110677857" /db_xref="GeneID:4198148" /translation="MLVALIAHDKPGALPIRQENRPAHVEYLKSSTAVQQAGPLLDDA GEMCGSLIILDVADMDEAKAWAQGDPYGAAGLFASVDLIPWNRVIG" gene complement(455406..456368) /gene="gpsA" /locus_tag="RD1_0469" /db_xref="GeneID:4198149" CDS complement(455406..456368) /gene="gpsA" /locus_tag="RD1_0469" /EC_number="1.1.1.94" /codon_start=1 /transl_table=11 /product="glycerol-3-phosphate dehydrogenase, putative" /protein_id="YP_680865.1" /db_xref="GI:110677858" /db_xref="GeneID:4198149" /translation="MSVGILGAGAFGTALAISLGHTTPVTLWARDAKQAQVMQNTREN TARLPGFALPAGVKVTSNLADLQGCDVLLLAVPAQKLRQFLRGLDQMVAGKTLVTCCK GIELETGMGPVDIAREICPQSEHAILTGPSFANDIAKGLPTALTLACANPDRARQLQQ ELSNGTLRLYRTSDVIGAQLGGALKNVIAIACGAAIGAQLGESARAALMTRGNAEMQR YAQHKGADASTLSGLSGFGDLVLTCTSELSRNYRFGLALGAGKAFDPATTVEGAATAC AVAQEAREKALDMPISSVVAALVENRLDVENAMTKLLSRSLKEE" gene complement(456365..457462) /gene="gcp" /locus_tag="RD1_0470" /db_xref="GeneID:4198150" CDS complement(456365..457462) /gene="gcp" /locus_tag="RD1_0470" /EC_number="3.4.24.57" /codon_start=1 /transl_table=11 /product="O-sialoglycoprotein endopeptidase, putative" /protein_id="YP_680866.1" /db_xref="GI:110677859" /db_xref="GeneID:4198150" /translation="MGRTQTVLALESSCDDTAAAVLRKGATGETQVLSSIVRGQDSLH AAYGGVVPEIAARAHAEILDICVEDALQAAQTSLHDVDAIAVTAGPGLIGGVVSGVMC AKGLALATGKPLYGINHLAGHALTPRLTDNVPFPYLMLLVSGGHCQFLLIKGPDDFKR IGGTIDDAPGEAFDKIARLLALPQPGGPSVERSARQGDAKRFSLPRPLLDRPGCDMSF SGLKTAVLRVRDGLVQDQGGLYPQDQADLSAGFQAAVVDVLAEKTSRAMQQYQQLSPT TATLCVAGGVAANMAIRTRLETVARDNGAVFVAPPLALCTDNAAMIGFAALERMADHP PDDLTLAARPRWPLDSKSPAMLGSGKKGAKA" gene 457543..458247 /gene="hemD" /locus_tag="RD1_0471" /db_xref="GeneID:4198151" CDS 457543..458247 /gene="hemD" /locus_tag="RD1_0471" /EC_number="4.2.1.75" /codon_start=1 /transl_table=11 /product="uroporphyrinogen-III synthase, putative" /protein_id="YP_680867.1" /db_xref="GI:110677860" /db_xref="GeneID:4198151" /translation="MQKIPLILTRPKGSNAVFEADIAPKVRQHVDFIHSPLLEIVPID GGYDSTGADHAIFTSANGVKYAPKGNGRRAFCVGEKTTQLARSHGWDAVFAGATVLAL KDHVLINRPQGEIHHYSGVFVRGNVAEDLSVAGLRVTNIPLYEQRLLPFSAQALSVLE RRAPVVVPLFSPRTAAHFAAIAPAHPQLYVVAMSTAVADSCNEMSPARLIIAREPTAK SMALCVENLVLNHSLG" gene 458308..459795 /locus_tag="RD1_0472" /db_xref="GeneID:4198152" CDS 458308..459795 /locus_tag="RD1_0472" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680868.1" /db_xref="GI:110677861" /db_xref="GeneID:4198152" /translation="MEDLAKSRKPNKATETVDQGAEKPIEAEEIVTTATETPDAESVL KEEPEAKDSAEKDADADTIPSDTDAKDDGLVDEKPADIAEEKIENDTVEPAETVEALK EHEAEDKPEEKSDAVDGEPWLDKDTPDEKAPDADTAEKPDSPWDKESDAEPVEEKPQE PEPAVAEKPVAQPQPEVVRGSMWPAVFGGVIAALIGFIAGRGDTLDAYLPASMQRPVV DISALEAAAAEASERAAAQAALIEAQAARLDALEAVEPTDTLDIVAELEADIAALTAM VAALENQEPVTIQADNSEANEAIASLQTALEAQNEEIEALAERAAAAEAGAAREAAQI LARAALTRVVTAVDSGQPFGTALADLEAVTPVEVPAPLQEAAENGVPTMAVLREDFPD VARSALMAARAETPESEVVGITGFFQRQLNMRSVTPREGSDPDAVLSRVQAAVENGDL ETALTEAETLPDAAKAVMADWLDAAQSRKAAQDAANELADSLNSN" gene 459807..461285 /locus_tag="RD1_0473" /db_xref="GeneID:4198153" CDS 459807..461285 /locus_tag="RD1_0473" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680869.1" /db_xref="GI:110677862" /db_xref="GeneID:4198153" /translation="MLWSLIKIILFVVAVAALAMGAVYLLESEGGVQVQVMGTEFTFS PIQSVIAAVVLIFVVWLFLKLLSLLVACLRFLSGDETAISRYFDRSRERKGFQALSEG LMALASGEGRVAMNKAAKAERYLNKPELTNLLVAQAAEMAGDRRKAEETYKKLVTTDA TRFVGVRGIMKQKLADGDTDTALQLAEKAFAIKPKHEEVQDVLLRLQAQKEDWSGARK TLSAKLKYGNLPRDVHRRRDAVLALSEAKDILSDASSIDVQEKAIEANKLSPDLIPAA VMAAGGYVEQNRPRLAVRLLKKAWEVHPHPDLAAAFAAIEPNETPAERIKRFMAITRI KPENPETKMLLAELHIANEDFPEARRALGDLAETDATARSVTLMAAIERGEGAPDTVV RGWLAKALTVSRGPQWICDNCQHIHREWGPFCENCESFDTLAWKTPPMSEMAMPGGMQ MLPLIVGALEEKPDETSGDIIEDAEIIPDSMDSAAPEPSKAT" gene complement(461337..462164) /locus_tag="RD1_0474" /db_xref="GeneID:4198154" CDS complement(461337..462164) /locus_tag="RD1_0474" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680870.1" /db_xref="GI:110677863" /db_xref="GeneID:4198154" /translation="MDKRDLSRLFKERLSSVINSHSEGRGHFMRAVGIDRSAMSQFLN PDTDRLPRAETLRRIATVSGVSVDWLLCLENAQEGRQEVAESVQIEKEIQSDGSTPLD QWRNEAAGFKLRTVPSTLPDIISMAPDVSDRASLEDARGGGVENVLERISLNDMDVEV AMPLQTLQDLSARSGLWRGTSRDRCHRQLTHMARICADHYPALRLHVYDGTKTFSAPF TVFGNQRVALYIGDAYLVVSSADQVRGFARQFDRLVRRAVISSDKIHVTLRQLADAV" gene 462237..463301 /locus_tag="RD1_0475" /db_xref="GeneID:4198155" CDS 462237..463301 /locus_tag="RD1_0475" /EC_number="1.13.-.-" /codon_start=1 /transl_table=11 /product="beta-carotene ketolase, putative" /protein_id="YP_680871.1" /db_xref="GI:110677864" /db_xref="GeneID:4198155" /translation="MRKHALVRTRGFSKDIPQISENLCCERAVVTPRKTHVQWPTLLV CLCCYGGVAGSTLYAEILGPVLAGLVLTLSLTLFSSFNHEVLHGHPFRSRHANTALVF PAMGLVIPYMRFRDTHLAHHHDPSLTDPYDDPESNYVDPAVWCRWSVARRRVYAWNNT LLGRMLIGPIIGLLTFYEGDARRIRQGDRDVIRAYLFHFAGLIPVVFWLVWMSEMPFW LYAIAVYASLAILKIRTFLEHQAHEKARCRSVIIEDRGPLSVLFLKNNLHAVHHAHPT LPWYRLQGFYDKRRAVVLTRNGGYVYRSYMQIAGLFLLKAKDPVPHSQWSSGHEQVPQ PQKPQKTTAARDITACNLTG" gene 463338..464144 /locus_tag="RD1_0476" /db_xref="GeneID:4198156" CDS 463338..464144 /locus_tag="RD1_0476" /codon_start=1 /transl_table=11 /product="enoyl-CoA hydratase/isomerase family protein" /protein_id="YP_680872.1" /db_xref="GI:110677865" /db_xref="GeneID:4198156" /translation="MKDIQNTLVELQIEGGIATITLNSPQTLNALSEDMLTGLQNALD GIAVNRDVKAVILRGAGNHFCAGHNLKEMTARRADADKGSAYFNALFGTCSKMMMSIV DLPQPVIAEVKGIATAAGCQLVATCDLAIAAEDARFATSGVNIGLFCSTPMVALSRNV PRKKAMEMLLLGEFLPASKAEEMGLINRVVPAADLETASAAMAQIIVDKSPVAIKTGK KAFYEQCNMPLDAAYAYAGAVMAENMLARDATEGINAFIDKKPMPDWTGE" gene complement(464214..465290) /locus_tag="RD1_0477" /db_xref="GeneID:4198157" CDS complement(464214..465290) /locus_tag="RD1_0477" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680873.1" /db_xref="GI:110677866" /db_xref="GeneID:4198157" /translation="MADISSSLSMPFIQPSQAQKHVTHNEALRILDVVTQLGVAADDQ TTPPTSPADGTRYIIDAGGVNEWANHEGEVALFENGVWRFFVPRAGWRAYVINRDALV VYDGAEWIDLDSPELEEIETFGLGMNSLPDTPFSAKLNATLWTALYRADGGNGSLLKT LNKEASADDNGFVFQQDFQTRALLGLFGSDNLRLATTPDGTNFVDALIADNATGIVDQ PRLPRFKGVTNFDNFCPAGTWTKIAINDLEYNEQAVFDAATNQFIVPVDGTYQLGALL TFKADSSTAARMGAQLLINGVTPISGSQVENTAAHFNGRTTISIQTLASLSAGSTVEL HGIMRSQPGYFMADRTDFWGFKVG" gene 465491..466639 /locus_tag="RD1_0478" /db_xref="GeneID:4198236" CDS 465491..466639 /locus_tag="RD1_0478" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680874.1" /db_xref="GI:110677867" /db_xref="GeneID:4198236" /translation="MHATVRDTQKATLQLTKRTPSKSGGENGCVAPSALPALQGRANS SLPVSRLEMLQARANHGAASRFPTTRQPVAQRHVSSQPVLQRDRVSTKLGDQTVSADQ SGAPETLAFLEPGRSHGGKYAPVHLTKKIKMAGAGLINAGGLTHGALNAQNAVTPDYH FTITSGFMTAALVNSPIKNYLVKHHKASQIWTIGAVSNEDLAQNKLKANQIVSAFNAD LELAAGANFDNLMLTYDPDGEGPTFDDVVRFHEGVKNTLFAIPTVNPGGDLPFTSIKF SQLKTHITAGADQLAAQWSKWTNNGAAATRNDFRISAGKWTDLAKAVNILNRIRSKAL KLETPGAATPAVFDDAFINDQLADYDAAKTAIKANMRTDQVAHADEFT" gene complement(466790..470086) /locus_tag="RD1_0479" /db_xref="GeneID:4198237" CDS complement(466790..470086) /locus_tag="RD1_0479" /codon_start=1 /transl_table=11 /product="calcium binding hemolysin, putative" /protein_id="YP_680875.1" /db_xref="GI:110677868" /db_xref="GeneID:4198237" /translation="MAIAVTGTDFRDTARIGSGAQVVELGAGDDRIITYGDSGEPDPA QTTGAQGRVTPPNAQPGNDILTGGAGADLFEFRALLNATPEVITAHSRPSGQVDWAGV AGENDDVHDHWVESFGLDTITDYSRAEGDQIKITGHTMTLESITYGADAGGSYSLITL FSQQGNGAAGGANTATGAHDEDPLGQIKVYGDRVFRGDLDIERTNDGIDRLTHTDSVF APLNAGVTRVVASNTDDTNYTGSAFKQVDRVTIGEGSQVVDTGGGNDVIFSFSDGGEP DPAQTNGAAGRVTPAIGAGQSNDVISGGQGQDTFAFRLLLNAKDDVLDAYTRADGSVN WRGVAGENDNVHDHWVEGIGKDVILDFSDQDGDSINIRGHTVEVAAITYGADTLGDFS LITLRSQQGDGRAGGINTATGAHDEDPLGTIKVYGDKVTMQDITVRANVFYGIDALED IKASERDGFADNSTPDLANPLWGLDSPWTINSTFTGTQHSNQFHAGSGTQTVLAGDGN DRIISYGDAGEPDPAQTVGSAGRANPKLGSGASDDYLTGGGGADRFEFHALLNATAEV IAQHTSVTGHIDWRGVTGENDNVHDHWVEGFGRDTILDFSRSEGDTILIRGHTVELDS ITYGQDARGSFSTLTVISQQGNGGAAGANTATGAHDEDPLGTIKVYGDRVTQSDVTVQ RDGIFDGGERLTMADRLLEYNGGAQNFQSARHQEVIITAPTDIKTVDRVETGSGAQQV YAGSGNDVIRIYADGGEPVPAQTGGAGRVTIPVAPALSRDVVSGGQGSDTFIFNYLLD ATDVVLARHTRDDGTINWRAVAGENDALHDHWVTSGGNDVLLDYSKQDGDAIELRGHT VELARITYGEDGGGDFSMLHVRSQQGPGGGAHDEDLLGTVKVYGDKVTKSDVKVTAKG VFDGVDLFEPIPNQPNHVVGNDGANKLSGTGNADNIHGKRGSDFITGGDGNDFIFGGA QNDRLFGGNGNDWIEGGQGMDALFGKLGIDTLVSTNGRDDMTGGGGSDTFMFMETSRG GQILDWEDGADTIDFSRMDAVQSLGDLKWDRLSDSSIRIEFTNDAGVDSGVTVFSTNN FSLTAEDFAF" gene complement(470358..471020) /locus_tag="RD1_0481" /db_xref="GeneID:4198238" CDS complement(470358..471020) /locus_tag="RD1_0481" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680876.1" /db_xref="GI:110677869" /db_xref="GeneID:4198238" /translation="MRIIRSTYPPIDLFEDIADPEDWPLLISAEQKTNPRLMESIGTL DLIPPDRRVGGPGASYLMAPFTHSSPDRPSRFSDGKLGVLYIASDFETAVHETAYHHA AFMLATGEPPGWTSQFRELFIGVHADLHDIRTVNDAIAPLLHPDDYLPAQNFAAQLRT SGSQGIVYPSVRGDGECVGLFYPDLAHSPVQGRHLDYHWNGDCVDLVRDAGSGDVFRI IR" gene complement(471056..471460) /locus_tag="RD1_0482" /db_xref="GeneID:4198239" CDS complement(471056..471460) /locus_tag="RD1_0482" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680877.1" /db_xref="GI:110677870" /db_xref="GeneID:4198239" /translation="MQPLETKAQEFAPQPITAEEGAAMLRAVLRLFGKWAITDEDAAT LLDLPVRTYRRWKAGQPGRLGRDTKARLSNILGIHKALRIIFRDTERVYAWVKAPNTA FGGHSALEIMRGGELTDLMRVRRYLDAERGAW" gene complement(471677..472846) /locus_tag="RD1_0483" /db_xref="GeneID:4198240" CDS complement(471677..472846) /locus_tag="RD1_0483" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680878.1" /db_xref="GI:110677871" /db_xref="GeneID:4198240" /translation="MNKTPKDAAGFYTEAGCDLSDFVALTRQQTAPETVPMAAEVSHK IPVYDMAQRRDMLEKPLTRRALMAEWAQVLQHGAGVFVLRHAYADTSVIDAATALYDR IIADEKVAKGTAADHFAAAGSNDRIWNSLQKLCEADPDVFVRYFANPTIDAACEAWLG PNYQMTAQVNVVHPGGSAQQAHRDYHLGFQTTQACAAYPAHVHDLSPLMTLQGGIAHG ATPLESGPTKLLPFSQRYRPGYTAWRRDDFRSYFEEHHVQLPLEKGDALFFNPALFHA AGSNSSRDIHRMVNLLQVSSPFGRAMETVDRTKTSLLAFGSLKDLPLADAELHAAIAA TAEGYPFPTNLDNDPPVGGLAPPSQQDVLKTAIAESWDQPRLEAALKAQEARKTA" gene complement(472862..473674) /gene="iolB" /locus_tag="RD1_0484" /db_xref="GeneID:4198241" CDS complement(472862..473674) /gene="iolB" /locus_tag="RD1_0484" /codon_start=1 /transl_table=11 /product="myo-inositol catabolism protein IolB, putative" /protein_id="YP_680879.1" /db_xref="GI:110677872" /db_xref="GeneID:4198241" /translation="MSTLLHKPTGRSGKVHDITPERAGWGYVGFGLYHLSRGETAAEE TGDREVIIVLVEGKARLSVAGSAFGEMGARMSVFDRTPPHCLYVPGQINWTATATTDC VVAICSAPCIEDYPAARLGPEGIELTPRGKGQNTRYINNIAMEGRDVASSLLVTEVFT PAGNWSSYPSHRHDEDDYPRMTYLEETYYHRLNPAQGFGVQRVYTDDRSLDETMAVSD GDVVCVPRGHHPCGAPYGYDMYYLNVMAGPLRKWRFENDPDHDWIAQRDADD" gene complement(473671..474465) /locus_tag="RD1_0486" /db_xref="GeneID:4198242" CDS complement(473671..474465) /locus_tag="RD1_0486" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, ATP-binding protein, putative" /protein_id="YP_680880.1" /db_xref="GI:110677873" /db_xref="GeneID:4198242" /translation="MNTQASPAPIVQMEEIEKHFGNVIALAGVSFDITPGECHCLLGD NGAGKSTFIKTMSGVHKPTKGRIMFEGSEMSFASPRDSMEAGIATVYQDLAMIPLMSV TRNFFMGREPTKGSGLFKRFDTDAANDITMAEMKKMGINLRAPDQAVGTLSGGERQTV AIARAVYFGAKVLILDEPTSALGVRQTSNVLATIDRVRKDGIGVVFITHNVRHAMAVG DRFTVLNRGKTLGTAKRGDITADELQDLMAGGQEMAKLEGSLGGTV" gene complement(474467..475567) /locus_tag="RD1_0487" /db_xref="GeneID:4198243" CDS complement(474467..475567) /locus_tag="RD1_0487" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, permease protein" /protein_id="YP_680881.1" /db_xref="GI:110677874" /db_xref="GeneID:4198243" /translation="MPTDAAVDERIKEEPFFSRMMKRPELGAIAGVILVTVFFLITAD PAMFTLAGFMNFMSPAAQLGILAIGAALLMVGGEFDLSVGSMVAFTGLFFGACVVTFG LPLIIAIPATLIFAAAVGACNGQIVLATGLPSFIVTLAFLFIFRGLSLVGLKWATDGS TQLRGVRDATENDWLTPIFSGDAFPGFFTKLAEMGMIDTFRNGTPKVTGIPVEIIWFV IIALLATYVLQKTPFGNWIFASGGDANAASNSGVPVKRVKLILFMVTATCAALVAIIT VLDSGSTDARRGFQKEFEAIIAAVIGGCLLTGGYGSAIGAFFGAIIFGMVLIGLTYTD IDQDWYLVFLGGMLLVAVLFNNMIRKRVTGER" gene complement(475630..476556) /locus_tag="RD1_0488" /db_xref="GeneID:4198244" CDS complement(475630..476556) /locus_tag="RD1_0488" /codon_start=1 /transl_table=11 /product="putative sugar ABC transporter, periplasmic sugar-binding protein" /protein_id="YP_680882.1" /db_xref="GI:110677875" /db_xref="GeneID:4198244" /translation="MKHFLKSTLAAAALAIATPALATDIIVVSHGQASDPFWSVVKNG VEKAAADTGANVEYRAPETFDMVAMSQLIDAAVNQEPDGLVVSIPDADALGPSIEKAV AAGIAVISMNSGSNVSKGLGALLHVGQEEFDAGKAAGEKMAEMGGTKALCINHEVGNV SLDDRCAGFAEGFGGEVIVLPTTNDPSEIEAKVKASLDSDESIDTVMALGASLAGEPA VAAVKAVGGEGSIRVGSFDLSAGFLESVSAGEAAFAIDQQQYLQGYLPVAFLALHAQY GLVPGGNVPSGPNLITADKAAQVVELSAKGIR" gene 476714..477712 /locus_tag="RD1_0490" /db_xref="GeneID:4198245" CDS 476714..477712 /locus_tag="RD1_0490" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LacI family, putative" /protein_id="YP_680883.1" /db_xref="GI:110677876" /db_xref="GeneID:4198245" /translation="MTVTLKDVAERAGVSRSAVSRTFTAGASVSPKTRAKVEKAADDL GYRPNALASSLTTGRTKLIGLISNNFHNPVFLEVFDLFTRCLQDRGLRPLLVNLTDET DPENSLRLLQQYSVDGVIVASSTLSQEFPLAFQTSRIPVVHSFGKFAHAPRVHVVGID NIECGRMAARTLIARGYNRLGFLGGPADATSTVDRRTGFLEVIEAVDDVTVSDSFATA YSFDAGRNEMLSLLRNTPADAYFCGDDVLSIGALSAIREAGLRVPEDIGIIGLNDMEM SRWQNINLTTIRQPIPQIIDSSIDLVMALLEKPDHQPEARLFACDIIERGTLRPLP" gene 477955..478242 /locus_tag="RD1_0491" /db_xref="GeneID:4198246" CDS 477955..478242 /locus_tag="RD1_0491" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680884.1" /db_xref="GI:110677877" /db_xref="GeneID:4198246" /translation="MERLQENAMKSRLILMIIAVWGLGACTATTGGNAGFIRNLPEEI VAMAAPNQDLTAVQLKEDDGCYWYRHTGPVETTMLPLRTAEGRPICTRPQT" gene complement(478389..479048) /locus_tag="RD1_0492" /db_xref="GeneID:4198247" CDS complement(478389..479048) /locus_tag="RD1_0492" /codon_start=1 /transl_table=11 /product="ErfK/YbiS/YcfS/YnhG family protein" /protein_id="YP_680885.1" /db_xref="GI:110677878" /db_xref="GeneID:4198247" /translation="MLTRRHFLQTSAALFSTSVLGAGTAASASSNWAVWDARVTPANY DPATTNPWGLHPRFLPVRVEANSGLVPGDIHVDAVARYLYHVQGDGTAMRYGVAIARG NLYEPGVFTIRRKARWPKWTPTAEMIRRDPELYTEFADGMPGGPDNPLGARALYLYEG NRDTYLRIHGTPSPRSIGSRASSGCVRMVMAHIIGLYDEVTPGATAHLYPAESYVTAN S" gene complement(479172..479681) /locus_tag="RD1_0493" /db_xref="GeneID:4198248" CDS complement(479172..479681) /locus_tag="RD1_0493" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680886.1" /db_xref="GI:110677879" /db_xref="GeneID:4198248" /translation="MTKPIPGTAVAQMTLPTVDGGTITLGQPKERWSMLFIYRGRHCP RCKRFLNKLNAVLPAWTDRMDVAVVSADTRQKALEDQKEFGWNFELGFDLSEDQMRAL GLYVSEPLSGTETDRVFAEPGAFAIRPDGTLMLVEISNGPAARPDLEELLDGMIFNIE NDRPVRGTA" gene complement(479855..480766) /locus_tag="RD1_0494" /db_xref="GeneID:4198249" CDS complement(479855..480766) /locus_tag="RD1_0494" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680887.1" /db_xref="GI:110677880" /db_xref="GeneID:4198249" /translation="MLSLLGSTVLLASCAPAVVTRSSNDPFEGGIGGTGIVGVLTGFG SLRINGVTVDVTRTTRYSTSFGATAVEALKPGMSLTIYAQRRGDGLVAKDVFVDHLLI GTLRGHPGDLRVNGISLQAPDTAQTLIGTRVAVSGVWSTTGVIASRIDPTALDKDLIA GTLTRLDDGHNGIGGLRLDAQGVRLATGQYAAVLGSSDADGFRVQSIANGRFARARDL RNLSVEGYLEPIDTQPGFRIAGLGHSFARDLSLAAIGARRAVYFGRYDGLFGASKGYV LPEDSAARRAILNRGISDGFEGPVIEV" gene complement(480774..481628) /locus_tag="RD1_0495" /db_xref="GeneID:4198250" CDS complement(480774..481628) /locus_tag="RD1_0495" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680888.1" /db_xref="GI:110677881" /db_xref="GeneID:4198250" /translation="MNATGSDGFLLLLKGLMRPLVRTMINRGITAPAFYKLLKTVYVD VAYEEFRLDGTAPTDSRVTLLTGVHRRDVRAILSNEDDAWKTARGKSAAFATVLSQWM TRPEYQDDAGHPMGLPRTSDDSPNFETLVREINTDIRPRTILDELMRQELVHESDDGL LRISDGAFSGPVSDHDKLVFFASNVGDHLAAASQNLLSEDAPFLERAVFYNRLSPGSV DQIEQHAGQLAQNMLETLNAQSSRLQQADQNETEPKERYRLGVYFYRESTNAGLDRAK DETGETEN" gene 481757..482263 /locus_tag="RD1_0496" /db_xref="GeneID:4198251" CDS 481757..482263 /locus_tag="RD1_0496" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680889.1" /db_xref="GI:110677882" /db_xref="GeneID:4198251" /translation="MAHLISRRGALKAGLGFAGLAGLSACGMATGRTPDIVDTAVAAG SFTTLVAAVQAADLVDTLKSPGPFTVFAPTDEAFAALPAGTVEDLLLPENKDKLVQIL TYHVVAGRIPAANIVGKRGSVTTVEGSDLHYDGRNGVKINKATVITPDVMASNGIIHV IDGVLLPS" gene complement(482746..483201) /locus_tag="RD1_0497" /db_xref="GeneID:4198252" CDS complement(482746..483201) /locus_tag="RD1_0497" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680890.1" /db_xref="GI:110677883" /db_xref="GeneID:4198252" /translation="MQDSAAESIAEELLYITGKALLEADFRMFSECFRLPQMMETVDG RRLIATESEFLYTFNSVRRHLHKCGVVDFARTVVSAKFLDADTIGSTHVSILLGADGQ ERGRPYPVYSVIRRHGNIWQIVSSLYAILDNPAYNEALMATPGFHSTDH" gene 483527..485047 /locus_tag="RD1_0498" /db_xref="GeneID:4198253" CDS 483527..485047 /locus_tag="RD1_0498" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680891.1" /db_xref="GI:110677884" /db_xref="GeneID:4198253" /translation="MSKDQMDALQEIFDTQPWFVRIGRRFWGMDPFVVLFIALFLGVV PIVAAVYVLNLGDVTHFILRGTAEAAPCPVDLVGSDQCLEKQVGYGHALNWWPSLSIM MPLAFFFAFTSVQNLQRTFRQMIQDRMFCNRDWHFDLTDQSSEMNRGVFRMVRLIWTC FSLAGLVVALLVGTVVVLDWYCVVHMPLMTGDLLTASGVTIPAVCQDTSGQEVDWSIA AIFAQATQITAPADMRSPSFAMNWGFSAYVYAVMLIELCLLMVYYCYVLALALTIQRL RNGAFDLWLVPKLSSQDPNGRMGFENLEQIFRPCIYVTIISFLVAFAMRIQNEFLRQT DFENIYQFLFQDFILALRDMFTPSVDSFAGFFADLFGDIQTFTSAIDVTGFRDPNSLV GGPLVLIVLSMVTVVLAVILRDTAKEARDRVSRALDDPDKKQAVIDFYGLDEAALRDK LGDMKVWPLSWPKMQQSIRMLILGVVCFVLYQVAFIWAGLMLIQMLKGRLGREVEG" gene complement(485058..485819) /locus_tag="RD1_0499" /db_xref="GeneID:4198254" CDS complement(485058..485819) /locus_tag="RD1_0499" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680892.1" /db_xref="GI:110677885" /db_xref="GeneID:4198254" /translation="MTGSEKKPLRVLSWNVFNENPDPARIAEALATLNPDIALLQEAL PAHIDEIKASFPHVSVARDYALKGELCHLVIASRFPTRRETTLFHADTSKPAPTRWAR HAGWVEFLDSLSVDVVVPGTRPFRVVNLHTSAGVSPSVRQAELAETQRHFDHEGPCLV AGDFNSYAVPWLAPLLAIPLHYRPKDWLIFERRALNAWFRRRGFAPALHGVTFPKFRL QMDQVFTRDIMVETAAIERRLWGSDHRPILLDISV" gene 486154..486681 /locus_tag="RD1_0500" /db_xref="GeneID:4197811" CDS 486154..486681 /locus_tag="RD1_0500" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680893.1" /db_xref="GI:110677886" /db_xref="GeneID:4197811" /translation="MYHRLKLARPTIAFASAWIGLMIAAMPVQADQTCAWSALTSPNR QQITCGDALMVEREPGTDVTIFERAGDAPPRAIELKNGAILIEVTPGSAPTQIRTPHA IAAVRGTTYVVDARQDSTSVFVIEGSVSVSKVSDASTVTLGPGEGVDVGDAVEFAVTA WPSDRAASLLSRFGR" gene 486633..488504 /locus_tag="RD1_0501" /db_xref="GeneID:4197812" CDS 486633..488504 /locus_tag="RD1_0501" /codon_start=1 /transl_table=11 /product="putative cyclase" /protein_id="YP_680894.1" /db_xref="GI:110677887" /db_xref="GeneID:4197812" /translation="MAQRPRGILALPIWQMISGRARRWALPLGAVTLALFWVLTLIIP YMSGRAGFFDPLEYRLLDVRHVLIGPRAAASDIVIVAIDDETLAAAPAELQSRRQLLA RIISNIAQSDARVLALDVLLADPGPAEDDAALAAALGEIPSSIAAAARFGADSASADS IIWPQAAFGEVAEAGLVNLSTDASGTPRYAPLLIDAGGSLVPSLPLLASLSFGGEKAV FGETQLTLGTRDVPLDFGFNMPLRHIGPEGSVPTYSARDLISGTLPDALSDKLVVLGF SASAMGDRFATPFDENTPGMEVIATAISQLSGGETLRRDAQTRQWDAALAVALTLICV TSVLVWPLSRGVPVAAGFVLVFLASITLAFASGLWLSGALALAVALPPAIAASGLRYM QENLQARKSEQSVASLRQFQSPALAAKIESDPNYLMEPIEQDLVVLFVDLTGFTGHSQ RLGQDGTRNLLAMFHKLTAQTVEARGGSVFNYMGDGALAVFGLERGGDASHADDALAS AFDLVHSLSHQSLPQTPDEPLSCRIGLHSGPVTLSRLGAQSHQQVTVTGDNVNLASRL MEVAKTEKAVVVASSDFAAGLTDGGPQESAYTTDVAIRGRDGRVQVLVWAKDALERS" gene complement(488501..489358) /locus_tag="RD1_0502" /db_xref="GeneID:4197813" CDS complement(488501..489358) /locus_tag="RD1_0502" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680895.1" /db_xref="GI:110677888" /db_xref="GeneID:4197813" /translation="MRDFSKDLSALALNTASLGHNLDGYGAGWSTEAVIDACGARGFG GIVFWRREIGTSAQQIGDRVRAAGLEVAGLCRSPFLTGPLVPGDDAAIMDDFHASIDM AAGLGTEVLTVVTGGIDPGTKGPLESQKRVADRVARAAEYAAARNVKLALEPLNPMFG GNRSCIFTVRDALHMCDWIGLDNVGLAIDVYHVWWDSTLTETMPRATGKVLGYHVCDW LAETRDTLLDRGMMGDGVADLKALRQLVEETGYKGYCEVEVFSAEDWWKRDPNEVLDV IAQRFRSLC" gene complement(489358..490521) /locus_tag="RD1_0503" /db_xref="GeneID:4197814" CDS complement(489358..490521) /locus_tag="RD1_0503" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680896.1" /db_xref="GI:110677889" /db_xref="GeneID:4197814" /translation="MRFSMKIALPDPAGTLSDYALQGTPIAQATLTPDAARVVFSAAH VVADPFTSNDPMGPASVDWDATMAFRRHLAGLGMGIAEAMDTAQRGMGLDWPGALELI ARTKSELPDALVFNGCGTDQLAPQDANTLDDVIAAYLEQIEAIQKLDGRIILMASRAL ARVAQSPDDYLSVYAKVLDACDHPVILHWLGPMFDTQLAGYWGGATFEECLETCLNMI AANTSKVDGIKISLLDKDKEITMRKRLPEGVKMYTGDDFNYPELIEGDEMGYSHALLG IFDPLAPAAAYAVSQLTRGNAAQFRATLDPTVPLARQIFRAPTQHYKTGVVFLAWLNG FQDHFIMLNGAQAARPLPDFVTIFKQADACGLLQDPELAVARMKRLLAIYGVL" gene complement(490518..491285) /locus_tag="RD1_0504" /db_xref="GeneID:4197815" CDS complement(490518..491285) /locus_tag="RD1_0504" /note="catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis" /codon_start=1 /transl_table=11 /product="3-ketoacyl-(acyl-carrier-protein) reductase" /protein_id="YP_680897.1" /db_xref="GI:110677890" /db_xref="GeneID:4197815" /translation="MRQVALVTGSSRGIGLAAAKALAREGFSIALNGPEDDDELAAAV AAIKEIGVPNVAVPFDVSDLTAHHAALTKAEEALGPLTTLINNAGVGVINRGDMLDVT EESYDRCMAVNTKAVFFLSQCFAKRLCARSRPAQLFHSIVNVSSANAIAVAAPRSEYC VSKAAAAMVTKTLAVRLGPENIAVYDVQPGLIETEMTAPVIAQYETRARAGLTLFPRV GQPDDVGMIIASLASGKLPYTTGQAISADAGMLVPRF" gene complement(491282..492427) /gene="mmgC" /locus_tag="RD1_0505" /db_xref="GeneID:4197816" CDS complement(491282..492427) /gene="mmgC" /locus_tag="RD1_0505" /EC_number="1.3.99.-" /codon_start=1 /transl_table=11 /product="acyl-CoA dehydrogenase" /protein_id="YP_680898.1" /db_xref="GI:110677891" /db_xref="GeneID:4197816" /translation="MFSTEVHAQVRQMTRQFADEVIRPVAEELDRDERFPTEIYAQMA QLGLFGICVPEAMGGPGMDTLAYAIVMEELSRGYASVADQCGLVELITTLLVTHGTQA QRDMWLPDILAAKTKVAYCITEPEAGTDVSGIRTTAVRDGEGWRLNGGKIWIHNAPVA DLGFVLARTDPEAGHRGMSIFVVDLHADGVARGPKEHKMGQRASQVGPLHFDNVTLPA HALLGAEGRGFHMMMSVLDKGRVGIAALAVGIGQAGLDAAVEYAAQRRQFDKAISEFQ GVQWLLADIAKDVEAARLLAHSAAHKIDIGADATKACSMAKCFAGDMAVARSADALQV FGGSGYIKGFEVERLYRDAKITQIYEGTNQIQRMIIARELLAKGADA" gene 492572..493588 /locus_tag="RD1_0506" /db_xref="GeneID:4197817" CDS 492572..493588 /locus_tag="RD1_0506" /codon_start=1 /transl_table=11 /product="oxidoreductase, putative" /protein_id="YP_680899.1" /db_xref="GI:110677892" /db_xref="GeneID:4197817" /translation="MDHATRNKFGRVDLEVTAFGFGTAPVGNIFREIDEATSDGMFQA AWDAGVRYYDTAPMYGHGLAELRTGQSLRWKNRDDLVLSSKVGRRLVPARRGDIDFAP WTNAAPFNLEFDYTYDGTMRAFEDSLQRLALERMDICFIHDIDVFTRGDAQPDVFKQA MDGAWKALAKLRDEGVVSAIGVGVNEWQVCQAALEARDFDCFLLAGRYTLLEQEAQDT FLPMCEARGAAVVVGGGFNSGILATGARAGAKYNYAPAPAEIMARVAKIEAVCADHQV PLPAAALQFVVAHPSIPSFIAGTRTIAQLEQNLKWFRHEIPADFWAELKHEGLLRTDA PVPV" gene 493585..494031 /locus_tag="RD1_0507" /db_xref="GeneID:4197818" CDS 493585..494031 /locus_tag="RD1_0507" /codon_start=1 /transl_table=11 /product="MaoC-like protein, putative" /protein_id="YP_680900.1" /db_xref="GI:110677893" /db_xref="GeneID:4197818" /translation="MNLSPGRYGYHDLASGDCLVTGARVISAELIDDFARVSGDTYEI HMSDAAAQAKGFERRVAHGLLVLAVIDGLKNNAPARFDALASLGWTWRFVAPVLVGDT ISARFVIREKRLTANGKRGITKITAQAMNQHGAIVQEGENGLIFDL" gene complement(494141..494452) /locus_tag="RD1_0508" /db_xref="GeneID:4197819" CDS complement(494141..494452) /locus_tag="RD1_0508" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680901.1" /db_xref="GI:110677894" /db_xref="GeneID:4197819" /translation="MIRHSVHLRFRADVTEAEKMSLYDALAGLSGHIDGIVDFQHRKN VSVETPLVRGFLDMFWFDFRDTSVRDTYLVDPEHQAIGARIVAALEGGPEGVFVCDVE L" gene complement(494465..495220) /locus_tag="RD1_0509" /db_xref="GeneID:4197820" CDS complement(494465..495220) /locus_tag="RD1_0509" /EC_number="4.2.1.-" /codon_start=1 /transl_table=11 /product="putative enoyl-CoA hydratase/isomerase family protein" /protein_id="YP_680902.1" /db_xref="GI:110677895" /db_xref="GeneID:4197820" /translation="MIDLSVRDGIARLVLNRPDKLNALTAEMCDMLAARCREIERGTA RVVILSGAGKAFCAGGDIEAWAGETPEAFGDHWVRDGHAAFDALARLTVPVIAQLDGH ALGGGLELAACADLRIAEQHIKIGQPETGLGIIPGWSGTQRAVRRFGAQVVRRMALFG EVFDAEEARRLGLVDHVIATGAAHVLAEDLAARVLSRGPQATKLTKMLINAADREDPE RIAEALAGRIAAGTDELREGLSAFREKRKPDFS" gene complement(495217..496800) /gene="pct" /locus_tag="RD1_0510" /db_xref="GeneID:4197821" CDS complement(495217..496800) /gene="pct" /locus_tag="RD1_0510" /EC_number="2.8.3.1" /codon_start=1 /transl_table=11 /product="propionate CoA-transferase" /protein_id="YP_680903.1" /db_xref="GI:110677896" /db_xref="GeneID:4197821" /translation="MPKIMTARDAADLIPDDATVAVNSSSGLCCPDAVLKGIGDRFDA VGHPRNLTTIHPIAAGDFFGTKGVDHIAKKGCLSRIIGGSYPSGPTKAEPPLIWQMIV ADEVAAYNVPSGIVFDMLREGAAKRPGVLTKVGMETFVDPRLEGCAMNGEARKTPIVQ LRDFEGEEWLYFKSIQPDVAIIRATTADTRGNLSFEHEGAYLGAMEMALAARNSGGTV IAQVKRIAAAGSIRPHDVTVPGILVDVIVEAPDQLQTTATQYDPAISGELIRPMDSFD TVDFNIGKVIARRVALELQRGWAVNIGFGISANVPRIFVEEGCHNDVTWMIEQGAVGG VPLLDFKFGCAANAEAFVASPHQFCYFQAGGFDCSLLSFLEVGADGSVNVSRLSAVPH RTAGAGGFVDITARAKKIVFSGMFNAGAKMRVENGEIVIEHEGKVAKFVDQVDQVSFS GKRAIAQGQHITYITERCVMRLDEQGLIVTEVAPGLDIDRDVVGQAATPLRVAPDLKV MDAGLFRDAPIDLAGRLSA" gene 496950..497768 /gene="dkgB" /locus_tag="RD1_0511" /db_xref="GeneID:4197822" CDS 496950..497768 /gene="dkgB" /locus_tag="RD1_0511" /EC_number="1.1.1.274" /codon_start=1 /transl_table=11 /product="2,5-diketo-D-gluconic acid reductase B, putative" /protein_id="YP_680904.1" /db_xref="GI:110677897" /db_xref="GeneID:4197822" /translation="MNIYFKHSNQRSFGTYPLKGTACRDAILTAAEVGYRAFDTAQMY RNEAETGAALKETGIPRDTLCVTTKVENDNYDESKFLASVEASLKALQLDYVDVLLLH WPPADFQIEGSLTLLEQAHKRGMARNIGVSNYTVQMMRDATRIIETPLVTNQIEFHPL LNQDVMLAAASETGIPLSSYCSVARGEVFKHPIFAEIGAGYGKTAAQVVLRWILQKGV SINTMSTKPENIAANFDVMDFTLSSVDMARIERMTHMNYRIVSKDIVPWAPDFD" gene complement(497788..499392) /gene="betA" /locus_tag="RD1_0512" /db_xref="GeneID:4197823" CDS complement(497788..499392) /gene="betA" /locus_tag="RD1_0512" /EC_number="1.1.99.1" /codon_start=1 /transl_table=11 /product="choline dehydrogenase" /protein_id="YP_680905.1" /db_xref="GI:110677898" /db_xref="GeneID:4197823" /translation="MAQGYDYIIVGGGSAGCVLANRLTEDASVRVLLLEAGGSDRHPF IHMPVGFAKMTTGPHTWGLMTAPQKHANNREIPYAQARVIGGGSSINAEVFTRGHPSD YDRWAREEGCDGWAFDDIRKYFIRSEGNTVFAGEWHGTDGPLAVSSLNAQPMTLAFVR SCQERGIPFNPDFNGAVQEGAGVYQTTTRNARRCSAAVGYLKPVMHRPNLTVRMNVLV KRVVVEKGRATGVDIWSAKTGSETVHADQEVIVTTGAIGTPKLMMLSGLGPAAHLKAH GIDVQADLPGVGENLTDHFGIDIVAELTGHDSLDKYNKPHWALWAGLQYLAFRTGPVA SNVVEGGAFWYADPDAATPDLQFHFLAGAGAEAGVPSVRPGASGITLNSYTLRPKSRG TVRLRSADPKDTPIIDPNFLGHPEDLKTSVEGVRISREIFAQPSLQKYIRAVRFPDDS VQTQAEYEAYARAFGRTSYHPTCTCKMGSSDDPMAVVDPRLRVRGVDGLRLCDSSVMP SLIGSNTNAPTIMIGEKAADMIRGNH" gene complement(499571..500140) /locus_tag="RD1_0513" /db_xref="GeneID:4197824" CDS complement(499571..500140) /locus_tag="RD1_0513" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680906.1" /db_xref="GI:110677899" /db_xref="GeneID:4197824" /translation="MPITTESYTSAPNGKIPNSRFPLLVHRNAVPGGGAEAIKTRFRE NGWSNNWDYPGVYEYAHFHSTTHECLGCARGWMEFNLSVGDGGWTKVRIEAGDVIVMP AGVSHEMIGQSEDIHMCGGYPDGRDWDDIQEEFLSNEDYKRACKRIMMLPIPARDPAT GKAMPEWHGAPSSVDGGWNDWRHALDKRE" gene complement(500156..501184) /gene="gutB" /locus_tag="RD1_0514" /db_xref="GeneID:4197825" CDS complement(500156..501184) /gene="gutB" /locus_tag="RD1_0514" /EC_number="1.1.1.14" /codon_start=1 /transl_table=11 /product="sorbitol dehydrogenase, putative" /protein_id="YP_680907.1" /db_xref="GI:110677900" /db_xref="GeneID:4197825" /translation="MTRAAVLSKPGHFEMQERPTPTPGRGEVLIRVARVGICGTDIHI FNGHYATDNLPMIPGHEFTGTIEALGPDVTGLRLGDKAVVDTNVGCGTCYWCRRSEIL NCPDMRQMGISMDGAFAEYIVVPARLVIPAPAHMPFEVLALTEPLACVVRAARKADVS FGQSVAVLGAGPIGHLHVQLLRTIGAAPIIVTDISPDRVALALRHGADVGVSDPADVK ACVMQATEGRGADIVIESVGLPALYQQALHLIRKGGHVAAFGLTGAGEVLPVDILTTI LQENSIKGSVAGSGQDMHDALNFLVHGRIDPAPFLGAEYPLKDIQTAFDTFGDRPDDL KTQIVMSD" gene 501353..502024 /locus_tag="RD1_0515" /db_xref="GeneID:4197826" CDS 501353..502024 /locus_tag="RD1_0515" /codon_start=1 /transl_table=11 /product="transcriptional regulator, TetR family" /protein_id="YP_680908.1" /db_xref="GI:110677901" /db_xref="GeneID:4197826" /translation="MFRTNDQGRSEVTEKRKTRDADATRLRIMQAAKKEFAKHGLGGA RVDEIAERAKANKRMIYHYFGSKEKLFKAVLEAAYLDIRNAEQKLDLDSMPAEKALEH LVRFTWDYYLKNPEFITLVNSENLHRARHLKKSEVIAVASRKFVSMMQNLLDRGVQEG VFRPGIDATQLNITIAAIGYYYLTNRFTGAIVFERDLMTPDALEERLAFNLDTIMRLV RADGL" gene complement(502021..502146) /locus_tag="RD1_0516" /db_xref="GeneID:4197827" CDS complement(502021..502146) /locus_tag="RD1_0516" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680909.1" /db_xref="GI:110677902" /db_xref="GeneID:4197827" /translation="MIGFFRALERLTKYLNHHVSRNKLNFDFRQRYVIEVFRMTL" gene complement(502143..503246) /locus_tag="RD1_0517" /db_xref="GeneID:4197828" CDS complement(502143..503246) /locus_tag="RD1_0517" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, ATP-binding protein, putative" /protein_id="YP_680910.1" /db_xref="GI:110677903" /db_xref="GeneID:4197828" /translation="MGFLDIENVTKSYGSTEVLHRVDVSVAEGEFLVLVGPSGCGKST LLNMIAGLEDITSGTIAIKGQPMNGVHPSKRNIAMVFQSYALYPNMTVAQNITFGLEM HGVPKAERAAAMDKVADMLQITPLLNRKPGQLSGGQRQRVAMGRALVRNPDVFLFDEP LSNLDAKLRVDMRTEIKKLHQRLGTTIVYVTHDQIEAMTLSTRIAVMNGGYVQQLGTP KEIYDNPANVFVASFMGSPSMNLIPAILRRKGAAAMVEITDATGAPVLLPVAVDQGAD GAAVLLGIRPEAVTDPDGADKKARNVVLARNRIDVTEPAGSDTFITTCFAGKDVVGRM RADAEAHPGEMAELALNMDKAVLFDPKTENRLR" gene complement(503250..504131) /locus_tag="RD1_0518" /db_xref="GeneID:4197829" CDS complement(503250..504131) /locus_tag="RD1_0518" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, permease protein, putative" /protein_id="YP_680911.1" /db_xref="GI:110677904" /db_xref="GeneID:4197829" /translation="MAIASSENAMRSGRFARTLIYLLLLLFALFYLLPLFVMLVNSLK PLSEITGGNMMALPDVWTIQPWLSAWSTAQIGVDPTGLKPYFLNSIAMALPAVLLSTF FGALNGYVLTKWQFRGHNIVFGLLLFSCFIPFQIVLIPMAQSLGVLGLAGSTTGLILV HFVYGIGFTTLYFRNYYAAFPTELVRAAQIDGAGFFRIFWRILLPSSGPIIAVSFIWQ FTNIWNDFLFGASFADADSQPMTVALNNLVSSSTGVKEYNVHFAGAIMAALPTLVVYV VAGRYFVRGLMAGSVKG" gene complement(504131..505024) /locus_tag="RD1_0519" /db_xref="GeneID:4197830" CDS complement(504131..505024) /locus_tag="RD1_0519" /codon_start=1 /transl_table=11 /product="sugar ABC transporter, permease protein, putative" /protein_id="YP_680912.1" /db_xref="GI:110677905" /db_xref="GeneID:4197830" /translation="MADTSSPDMRTRLQNWLPKLVLAPSFALVLFFVYGFILFTIYLS FSDSRLLPSYGLVGWENYSKLFRLSHWETAITNLAVFATLYIVICSVIGLLLAILLDQ KIRGEGVLRPIYLYPMALSFIVTGTAWKWMLDPGIGIENTMHLWGWESFAFDWIKNRD YAIYTVVLAAVWQSSGFTMAMFLAGLRGIDNEILKAAQMDGASNWQLYRRIIIPQLRP AFLSAFVILSHLAIKSYDLVIALTGGGPGRATELPATFMYSYTFSRNQMGIGASSAVI MLMTVAAIMVPYLYAELKEKK" gene complement(505080..506330) /locus_tag="RD1_0521" /db_xref="GeneID:4197792" CDS complement(505080..506330) /locus_tag="RD1_0521" /codon_start=1 /transl_table=11 /product="putative sugar ABC transporter, periplasmic sugar-binding protein" /protein_id="YP_680913.1" /db_xref="GI:110677906" /db_xref="GeneID:4197792" /translation="MKKMIKGALIASTCLMGAAQIAQAEDVEVLHWWTSGGEASALNV LKQDLEGQGIGWTDMPVAGGGGEQAMTVLRARVTAGNAPTAVQMLGFDILDWADQGAL ADLNATAAEQGWDDVVPDALKAFAKVDGKWVSAPVNVHSTNWVWANKSVLDANGIAVP ETWDDFVAAVDTLSAAGITPIAHGGQAWQDATVFDAVVMSTGGPEFYKAAFVDLDPEA LNSDTMVEAFNRMAFIRENVDDNFSGRDWNLATAMVMNGEAGFQMMGDWAKGEFLNAG KVPGEDFLCFRFPGTQDQVTFNADQFAMFDQGGEVSAEQSALASAILSPSFQVAFNKV KGSVPARTDVDGSDLDACGQQGMKDLAAAASSGNLFGSMAHGHAAPASVKNAVYDVVT AHFNGEYDAATAAEELATAVEIAQ" gene complement(506487..508424) /locus_tag="RD1_0522" /db_xref="GeneID:4197793" CDS complement(506487..508424) /locus_tag="RD1_0522" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680914.1" /db_xref="GI:110677907" /db_xref="GeneID:4197793" /translation="MFRFNLCVLLFATLATLSAAQEQTPAYVGSAECRDCHTKAAEAW EGSHHAKAWTAPTAENIVADFNDTEFRHDGTLTRFRVEDGRHYITVTEKDGVTTDYPV HSVAGIEPLQQYLLETEPGRIQSFDVVWDTIKQEWFHLYPDQDLPPDDGLHWTGPYKN WNARCAECHATGFEKNYSPVTRSYSSVPVEIGVGCEACHGPGSAHIAWATGKSLEEPL TGLSEYRLTIDYDAGTETVLQQCASCHSRREAHFDGNPVPGIPFNDAYALALLRPGAY HADGQILDEVYVYGSFLQSKMYQQGVSCSNCHEVHSAELKAEGNGVCTQCHSPAGNPS FTTLDSKNYDDPSHHYHEAGTEGAQCKSCHMIERVYMGVDGRRDHSFRIPRPDISLET DSPNACTDCHSDQSSAWAAAAIEEWYPDSENRGLHYGQVLAAGRANAVAARVPLTDLA GDTTQPGIARATALWLLEQSGDATLGAELSSMLTDTDPLVRAAAASAHGLFPPAERAA ALEPALDDPRRMVRIAAGKTLLDVPRSALTPSASERLGAALREWQAGLLNRADFPETH IILAGTALTMRNFEGAERAFREVVLMDPQREEAWVMLVRIADAMRGPQAAAQVLDEAL QAVPGSDTLNSMRSESLLPPQ" gene complement(508443..509720) /locus_tag="RD1_0524" /db_xref="GeneID:4197794" CDS complement(508443..509720) /locus_tag="RD1_0524" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680915.1" /db_xref="GI:110677908" /db_xref="GeneID:4197794" /translation="MMQRRALFLAVLFGLWAGMALAQDPLVEVEFEENTTIPGQPLSL RVTVLVPTWLPKPVVFPTLEAPNILVQLPEGATGPASRTIDGETWSGVSRRYRVTPMV PGRVQIPAQELSVTWAEPGKPDPLQQTFTLDPIVVEGRVPEGAEDLSPFIAAQNLTLT QEVSEADMPLQAGDSVTLTLTAQIEGTSAMFLPSLMPEIDIKGVAVYPSEPTIQDKEE RGKLSGTRTQSVTLVAQSGGGGAFPALELGWFNLTSQAVEIARTEGFDVTVDAPPALV QNTDPRVLAAYVAGGLAALALCLLALRRLSPRLRAMMAARRRHMEASEHWAYAKAVEA AKARDFDGLLRHLDIWAARCRVDPTAQATLQSALCALGAARYGPGGTSQNDAWKRVLT ALPQVRAAALKADRKKPELPPLNPTDAQSQRTA" gene complement(509717..511261) /locus_tag="RD1_0525" /db_xref="GeneID:4197795" CDS complement(509717..511261) /locus_tag="RD1_0525" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680916.1" /db_xref="GI:110677909" /db_xref="GeneID:4197795" /translation="MGDFLFITVAEMLRAFDFIRPFVLLAVPVVLGLWWMVRRGSVRK DQNTKGISPHLRKALTVGEAQGRRLTPIDGVAAAMILTVLAAAGPTWSRMPDPFVSPT APVVIVLKNTASMEQTDVAPSRLELAKFKIRDLLEMRAGARTALVAYAGSAHRVVPFT EDVQIMVPYLEGLTPDVMPQEGNNAQDALALAMDILATEDAPGGILFLLDDLDVQDAS AITQAGANAVVLHQILPSGTNSRGLDMVDGAPVIPVSVDDADLRQIDRTLNAAYRAAV LETSTQPWQDRGWIFAIPAALLCLIWFRRGWTMKWAIVLLITMTGINQPQRTAAEGVA DWFLTPDQQGQLAYNRNDFKRAAELFQDPMWQGYTMMRDGQYDKAVEVLARLETAEAA FAQGLAHIRNRQYRDGVRAFETVLERDPDYPGAAENLATAREIVDYIETVQEQSDTGE EAGIGADDTVFDNESGRGAETEIETSDPDEMGMLSTEQWMNTVDTRTGDFLRQRFLIE QSRSSE" gene complement(511261..512244) /locus_tag="RD1_0526" /db_xref="GeneID:4197796" CDS complement(511261..512244) /locus_tag="RD1_0526" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680917.1" /db_xref="GI:110677910" /db_xref="GeneID:4197796" /translation="MISFVFPWAFLALPLPWLIWRFVPAHKETVPAIRFPFFRQVIAE AKLTPAKGAVIMRRNWLQIIAASLIWILLVIAISQPERLGAPIETSKSARDLILAIDI SGSMDTRDFTDASNENLQRLAGVRDVVRAFVEGREGDRMALIVFGSKAYLQSPLTEDT GTIVELLDQTEVGMAGPHTAIGDAIGLSIRTFEASEIEQRLLILLSDGADTASRMSPL NAAEIARGAGVEIFTIAVGDPDGTGENRVDVAALQDIANRTSGSYFFAADQAALDEIY ARIDELAPRLTETQSFRPRQTLHHIPLILAMFIGIGSVALLQLTSHRKTSV" gene complement(512241..512729) /locus_tag="RD1_0527" /db_xref="GeneID:4197797" CDS complement(512241..512729) /locus_tag="RD1_0527" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680918.1" /db_xref="GI:110677911" /db_xref="GeneID:4197797" /translation="MSEKTPSTNAPTSLVDLINKLVEPVEPAPISMVPQTGGWVVLAI VLIVLALYGVLRIRAHLRRNAYRKAALSALEQAGDDAAAIATILRSTALAAFPRAQVA SLSGPEWLAFLDRCAGMDDFTNGAGQVLATAPYASCARADPALREAAKNWVRRHQRQV SA" gene complement(512726..513709) /locus_tag="RD1_0528" /db_xref="GeneID:4197798" CDS complement(512726..513709) /locus_tag="RD1_0528" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="YP_680919.1" /db_xref="GI:110677912" /db_xref="GeneID:4197798" /translation="MRDIPARIRTNTLPDPAPVPKGLDTRIHVTLPHLRGLEGPARGL HFLPRQPARSVLNGRHTSRLRGRGLNFEELRDYMPADDVRSIDWKVTARTGKPYVRVF TEERDRPTLIVVDQRMSMFFGSVLNMKSVTAAECAALAAFAILEQGDRVGGIVFGDDL RAEIKPARSRAALNRFLSALASANQLLRPEAPTVPPQSINQVLGAVARIAPRNHLVIV LSDFDVIDDQTRKLVRGLSRHNDLILGLVTDPFADNLPPDAKLVITDGVLQAAVDMSD SQVHRDLTEFAKRRVAEIVDWQRQFGISVLPLTSAEDSLVQMRRLMGLGRR" gene complement(513720..514709) /gene="moxR" /locus_tag="RD1_0529" /db_xref="GeneID:4197799" CDS complement(513720..514709) /gene="moxR" /locus_tag="RD1_0529" /codon_start=1 /transl_table=11 /product="MoxR-like ATPase, putative" /protein_id="YP_680920.1" /db_xref="GI:110677913" /db_xref="GeneID:4197799" /translation="MSARTDIDTLIERMGEAIIGQRDVIERLVIGLLANGNLLVEGLP GLAKTRAIKALAKNLQCDFSRIQFTPDLLPSDVTGTEVYYHKEGGSEFKFEPGPIFAN IVLADEINRAPAKVQAALLEAMEERQVTVAGTTHPMEPLFMVMATQNPVEQEGTYPLP EAQMDRFLMHVNITYPPVEDEVLVIRLVRGEEAAASAAPDDKVKSEKPAPISQSTVFE ARREIVAIHVSDAMERYMADLVNATRIPEAFGDDLKRWIEIGASPRASLALDKCARTH AWLKGRDYVDPQDVRAIAPDVFRHRLGLTYEAQGEGVSPDQVVAEILTQVALT" gene complement(514706..515662) /gene="napD" /locus_tag="RD1_0530" /db_xref="GeneID:4197800" CDS complement(514706..515662) /gene="napD" /locus_tag="RD1_0530" /codon_start=1 /transl_table=11 /product="nonspecific acid phosphatase" /protein_id="YP_680921.1" /db_xref="GI:110677914" /db_xref="GeneID:4197800" /translation="MRGLLFSAAICLATSPALSDPLPSWGSTENKSTIISFVESVTDP TSPDYVTPADRIAVFDNDGTLWGEQPVYFQLIYALDRLKAKAEADPSILTSDILRAGA EGDLETIAAGGVEGLLEILAVSHSGMSVEAFQNDVRDWLDEARHPTTDMRYDAMVYQP MLELLSYLRDEGFQTWIVSGGGVHFIRAFAESAYNIPPEQVIGSAGPTEYLDGQVMKL PGIDFVDDKEGKPVGIDNRIGK