LOCUS MED193 4674670 bp DNA linear CON 09-NOV-2005 DEFINITION Roseobacter sp. MED193. ACCESSION VERSION KEYWORDS . SOURCE Roseobacter sp. MED193 ORGANISM Roseobacter sp. MED193 Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter. REFERENCE 1 (bases 1 to 4674670) AUTHORS Pinhassi,J., Pedros-Alio,C., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C. TITLE Direct Submission JOURNAL Submitted (09-NOV-2005) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA FEATURES Location/Qualifiers source 1..4674670 /organism="Roseobacter sp. MED193" /mol_type="genomic DNA" /strain="MED193" /db_xref="taxon:314262" gene complement(<1..823) /locus_tag="MED193_00005" CDS complement(<1..823) /locus_tag="MED193_00005" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="integrase/recombinase" /db_xref="CDD:27734" /translation="MTEERVTPLRQRMIDDMRIRGMGEKAQKSHIRAIKDFAAFLGRP PDTATPEDLRAYQLHMTDSGVTPSTFNVRIVALRFFFSMTCGREEMKRYMQFRTEPRK LPVVFSVEEVSDILMAAPGPGLKYRAALSISYGAGLRASEVCNLKISDIDSDRMLIHV ELGKGQKDRKVMLSPGLLELLRAWWREARPEGWLFPGKPKINPISPRQLSRAFTSAKH MAGVKKPATLHTLRHSFATHLLEQHRRAGYSVLLGTQLTTLRDTLMWHRRSATLSA" gene 1182..2108 /locus_tag="MED193_00010" CDS 1182..2108 /locus_tag="MED193_00010" /note="COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily" /codon_start=1 /transl_table=11 /product="putative membrane protein" /db_xref="CDD:12307" /translation="MATASTQSRPAIPYALAIAGVLFASVCFGLVPYFSRGLTEQGIA PYAVAFYRYIVAAILLLPVLFKHRQAWSEISWGLSAGAVMGLGWIGYVMALETLPAST VGVLYMTYPVFTLVIAWAFFSDAPTKRALLASGLITVAAIIAGSPASVPLQHIPMLLL SLAAPFGFGFGICVLVHRLSRIPPLARIASVSLGSVLGLLPLMAGADIAELLPAGQSD WVLIVGIGLITALVPQLVYTICSPLIGASQTAVVGSIELPTMFAVGVIAFDEVITMHQ AVACALVLGAIAITRSRKTRTVTTVIARKPKK" gene 2274..4205 /locus_tag="MED193_00015" CDS 2274..4205 /locus_tag="MED193_00015" /EC_number="1.14.13.7" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="phenol 2-monooxygenase" /db_xref="CDD:10524" /translation="MQYYVDGFRPGDPDVKAPAPGRDRSLNGAIPDKVDVLIAGCGPA GLCLAAQLAGFSEITTMIVEPKHGPMEKGQADGVNVRSMEMFQAFGFAEKVKREAYWV NQTTFWKPDPGNSDHITRVGIAQDVADDQSEMPHTIVNQARIHQLFLDVMRKSPTRLE PHYGLRVLDIEIDTGAEEYPVTVTLERVKEDGSAGETLTLRANYVVGCDGARSNVRKA IGGKLHGDAAHQAWGVMDILANSDFPDLRRKCLIQSAKEGNVLIIPREGGYLFRMYVE LDKLNPDERVSNRNLTSDHIIAAANRIMRPYTIDVKEVVWWSVYEIGHRLTDKFDDVP EGETATRNPRVFTAGDACHTHSPKAGQGMNVSMGDTFNLGWKLAHVLTGRADASLLHS YSAERLEEAKRLVETDHKWARVMSAPPGESELDGTDMPRFQKQFIENLEFTGGLAVHY DPSRIIAETEHQRLATGQIIGKRFHSAPVLRLSDAKPLHLGHVAQADGRWRLYAFAGK DDVGTSGGAIDRLCAWLESDPASPVQRFTRKTEDIDGLIDLRAVFQQDFKSLNYEAMP SLLRPAKGRYGLRDFEKVFCVDHKLGDDIYDMRGIDRTKGCTIVVRPDQYVAHILPLD AFDDLTAFFDGVFKPRDEA" gene 4319..5242 /locus_tag="MED193_00020" CDS 4319..5242 /locus_tag="MED193_00020" /note="COG0679 Predicted permeases" /codon_start=1 /transl_table=11 /product="predicted permease" /db_xref="CDD:10548" /translation="MTDVVLLMLPIFTMIAIGSLFVWRGWFPTEGLPVLNKFVMNACI PVLLFSAITNGESLSDFSWLNSVTYAAGSLGSVVFLWVLLRYGFREAQPQSVILALGG ATANTIFLGFPIASAFIPGRAAEAFAWVVFAEVAIIMPLITTLALLAEERHEGNALST ALKALFRSPVVLGLLGGFAFLATGLSLPGWGDQVVTSIVSAAPFVALFVIGGSILQFR MSRSGPRVLAVTLTKLVVHPLVVGVAFWAVFGWADPVTRDAILFACMPLFLSFVAFCG RHSVGDVGASAIVMSTLLGAVTVPVVLGFLF" gene complement(5263..5451) /locus_tag="MED193_00025" CDS complement(5263..5451) /locus_tag="MED193_00025" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTQQELEDVYAALAHRIDAVGPDNCQLFLAKLSLLLAYENGDAE KVADCIDAAAASLSLRDI" gene complement(5448..6947) /locus_tag="MED193_00030" CDS complement(5448..6947) /locus_tag="MED193_00030" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="Monooxygenase, FAD-binding" /db_xref="CDD:10524" /translation="MTAALALAREGIRSVVFDNKSTFNDGSRAICIARPSFYILEQIG AVEPFLEKALGWTTGRSFFRGDQILEFQMPDSKDEKYRPMYNLQQQYIEQFLWQTVER SDLIEVRWQSEVIGVEDTETGARLTVSDPHGDYPFEATWILACDGARSPMRKMRGLRL KGENFEGRYVIADIRMAHDYPTIRRALFDPECRPGGTVLIHKQPDDIWRIDYQLGDDE NTEDAIKEQTVRDSVTSVLRDIGHDGPWELEWWSVYSANTLALDDYRDGRVFFVGDSA HIVPIFGVRGLNNGLADAANIGWKLGWVLNGKASEALLDSYTPERRGATLDVFANASK SARFMTPNTQGWRIMRDAALSLALTKPFAGELANPRQMTAFTYADSPAVLPDDPAFTE GPSVGALMPDMPLGGAFLSDRLGAGFNVICFSQELKEQLAELLPSYDALCVMCLPFPC AISDKLGAGKMTAYLIRPDMHIAARWKETGAETIFNALLSVTFTKGTGQ" gene complement(7199..8686) /locus_tag="MED193_00035" CDS complement(7199..8686) /locus_tag="MED193_00035" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctM subunit, putative" /db_xref="CDD:11306" /translation="MIGLLSFPALLILIFLRVPIGLAMFLAGLVGLVAVTGDTTIPFA RLKSETFGTFSNYSLSIVPMFLLMGYFATLGGMSQSLFKAAESWLGHRKGGVAMASVG ACAGFGAICGSSLATAATMSRVALPELKAYGYAGGFSTATLAAGGTLGILIPPSVVLV IYAILTEQNIAKLFLAAFIPGILAAAGYMITIAIYVRINPANGGTTRARMPYLDRFRA LFDVWPVLLVFFLVVGGIYLGWFTPTEGAAVGAFGTGLIAWLAGGLTRTTLSESFFVT ARASAMIFFIVLGAAFYNGFLALTQLPQEAASWVGGSGLSPWLILMIILVFYLLLGCL MDSLSMILLTIPIFWPIMQELDFGLVSMVELQSAKLDDLVASGAEISASVLQEAQALL ASGQELSREMTRELGLRGVNQGALNRVNVEYTAIWFGILVLIVVEVGLITPPVGMNLF VINAMDKKTPMVDTYKAVLYFVGSDLIRVMILVAFPFITLALLPL" gene complement(8695..9279) /locus_tag="MED193_00040" CDS complement(8695..9279) /locus_tag="MED193_00040" /note="COG4606 ABC-type enterochelin transport system, permease component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:9849" /translation="MHTFFDGLARTFARLGGYVLTILIVLTCLSILGRSLNTILNGEF IQSVMPGLAAALLNTGVGPIKGDFEIVEAGMAFAIFAFLPLCQLNGAHASVDIFSSKL PLRANRLLRAVIEVVFAAVLILIAWQLFEGMQSKRNSGETTFYLEFPIWWAYAVSLVA AIVAAIVSIYVATMRVVESATGNRVLPPELEADH" gene complement(9340..10386) /locus_tag="MED193_00045" CDS complement(9340..10386) /locus_tag="MED193_00045" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="TRAP dicarboxylate transporter, DctP subunit" /db_xref="CDD:8627" /translation="MTMLKKTRNLLLGSAVAAMAATGALAQEVTLKLHQFLPAQANVP KLVLDVWADKVEADSNGRIKVDRFPSMQLGGKPPELYSQAVDGIADVIWTVVGYTPGR FPTTEVFELPFFVQDARAASCAFWKMHEEHTRDGEFKDTKILATWVHGPGAFHTSDPV ESPEDLQGMKIRGGSRLVNKLLEQVGATPVGLPVPSIPESLSKGVIDGATIPWEVTTA LKVPELVEFHTEFEGAGLYTLTFVVAMNQAKYDSLPDDLKAVIDANAGLEFSVFGGGT QADADGPARQIAVDNGNEIYTVTDTQPWLDVVEPVYAEWVADMDSKGIDGQALIDQAR ALMSGECAGANAKF" gene 10868..11044 /locus_tag="MED193_00050" CDS 10868..11044 /locus_tag="MED193_00050" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVSARIAAQDSGAIGGCLTHGVARDRTWNITSEAVGHSVNQGAA LFEFLEHHGIASKR" gene complement(11166..12095) /locus_tag="MED193_00055" CDS complement(11166..12095) /locus_tag="MED193_00055" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="pca operon transcriptional activator PcaQ" /db_xref="CDD:10453" /translation="MDRRIKFRHLDTFSAIARAGSFKKAAAELNLSQPAISKALKELE GILGTDLMERDRSGIKLTQKGEVFLQFAEQSTAALRHGLRSVRTSGDAKEHLNIGVLP SVASGLLPAAVSAFLKGNPDTLLEVHEGPHTDLTSRLRSGKLDLVVGRLGRPQSMQGL VFRQLCSEEVVVVAAPQSNARSIHRFEDLDRFRVLYPPQDSAIRPLVARMLISRGIPL FPNRIETASAAFGRALTLADPNTVWIISRGVVLGDIEEGRLVRLEVDTGPTVGAVGIM SIADDVPTPAIRAFSSALIRAANRGAEANANSD" gene 12189..13358 /locus_tag="MED193_00060" CDS 12189..13358 /locus_tag="MED193_00060" /EC_number="1.14.13.2" /note="COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /codon_start=1 /transl_table=11 /product="4-hydroxybenzoate 3-monooxygenase" /db_xref="CDD:10524" /translation="MKTQVAIIGGGPSGLLLSQLLHTRGIESIVLERKTKDYVLSRIR AGVLEQGLVRLLEEAGCAERLHAEGYVHDGTLVSYGDEMFRVDFTEHTGTPVIVYGQT EVTRDLYAAREAAGGIIEYEVEDVVINNADSDAPYITYTVGGEPRRVDCDFVAGCDGF HGISRQTIPLDVRREYEKVYPFGWLGILSETPPVNHELIYANSTRGFALCSMRNENLS RYYIQCSLSDKPEDWTDEAFWQELKRRIPADQAAKLVTGPSIEKSIAPLRSFVTEPMR YGNLFLCGDAAHIVPPTGAKGLNTAASDVHYLYNGLRAFYETGSREGIDSYSEKALKR VWKAERFSWWFSSLMHRYPHQSEFDLKMQIADLEFLRSNKAAQQAMAENYVGLPY" gene 13380..13763 /locus_tag="MED193_00065" CDS 13380..13763 /locus_tag="MED193_00065" /note="COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit" /codon_start=1 /transl_table=11 /product="4-carboxymuconolactone decarboxylase" /db_xref="CDD:10469" /translation="MTDRYNTGMATRRSVLGDAHVNRAEAAKSDFDLPFQTLITEGAW GTVWADDSISRRERSMLTLALLAATGNFEEIPMHIRATANTGASKDDVMQALLHVAIY AGVPKANHAIKLAKSTYAEMEEMTS" gene 13760..14488 /locus_tag="MED193_00070" CDS 13760..14488 /locus_tag="MED193_00070" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="protocatechuate 3,4-dioxygenase beta subunit" /db_xref="CDD:12813" /translation="MTTPGEFYQRDRSVHPPALTPNYKTSVARSPRYSLISLQNSVSE ITGPVFGHNDIDAGDNDLLTNYAKAGESPIGERIILHGRVLDENVKPVPNTLVEVWQA NAGGRYRHKKDTYLAPIEPNFGGCGRTLTDENGYYYFRTVKPGAYPWRNMVNNWRPAH VHVSVFGSSFVQRLITQCYFEGDPLIPICPIVQTIPDPDAIEQLTAKLDLKASIPLDT IAYRFDIVLRGRRSTLFENRLEGN" gene 14492..15112 /locus_tag="MED193_00075" CDS 14492..15112 /locus_tag="MED193_00075" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="protocatechuate 3,4-dioxygenase alpha subunit" /db_xref="CDD:12813" /translation="MSEQLNYLKESASQTAGPYVHIGLAPGAAGFDIYKQELGWDIAG PNAKGERIRVEGRVIDGMGAPIKDVLLEVWQANAEGHHAHPEGGGPVEDGFRGWGRVI TDFETGEWGFDTVKPGKTRGRNVGTQAPHLNFWIVARGINIGLNTRMYFDDEVEANAK DPVLNLIEWEHRRATLVAKRSERDGVLVYRFDITLQGEDETVFFDV" gene complement(15196..16257) /locus_tag="MED193_00080" CDS complement(15196..16257) /locus_tag="MED193_00080" /EC_number="5.5.1.2" /note="COG0015 Adenylosuccinate lyase" /codon_start=1 /transl_table=11 /product="3-carboxy-cis,cis-muconate cycloisomerase" /db_xref="CDD:9891" /translation="MTNPFLQSGLFGTLFRDQTIAAEFGVDAFLARMCRFEVAWTRAL EAAGQITRFEADAAVEVIAQSSWRDYSAASDKDGLPVPGLVASLREGRETRVASAIHT GATSQDVIDTAMVLTCLNVLDELEDRLATLVDRLETLLDASRDLPLMARTRMQAAVPA TVGLRVSSWLRPLVDHQSRIQALRQDLAKVQVGGAVGKRDTPADHAELVAEHVAHALG LSLGPVWHTDRTSLVGFGHWLTLVSGSLGKIGQDIALMTQQGVDEIVLDGGGGSSAMP HKQNPVLAEAIVALSRFVAHQQGLLAQSMIHEQERSGSALALEWMTLPAMAEATGASL RHTDGLIASIKRIGSQQTA" gene complement(16327..18594) /locus_tag="MED193_00085" CDS complement(16327..18594) /locus_tag="MED193_00085" /EC_number="2.3.1.8" /note="COG0281 Malic enzyme" /codon_start=1 /transl_table=11 /product="phosphate acetyltransferase" /db_xref="CDD:10155" /translation="MTTDLKTEALDYHARGPAGKMQTLPTKPMTTQHDLALAYSPGVA YPCEEIAADPATAALYTARAHTVAVITNGTAVLGLGNIGALASKPVMEGKAALFKKFS GLDCVDLEVDETDPTQFIEAVARLEPSFGGINLEDIKAPECFVIEKALKQRMGIPVFH DDQHGTAIVTAAGILNALRLVEKRIEDVRIVANGAGAASLACLDLLVSFGASKDNIIV CDSKGPIHTERDNLDQYKGAYAAKTNARDLAEAMVDSDIFLGLSVAGAVTKEMVASMA DQPIIFAMANPEPELRPELVREVRDDAIIATGRSDYPNQVNNVLCFPFIFRGALDCGA TEINEEMKRACAIGISEMTRKAAPHTVLAAYGIDSLKFGRDYIIPKPFDPRLIIEIAP LVAEAAMKSGVAARPIEDLDAYREELRRHVFRSGLLMKPVFDLAMRNPVRIAFAEGVE ERVLHCADQAIRQGIAKPVLIGSVERIEAKIKDLGLSLANGTDIEIVDPHTMDRSALS EDLHKRIGRDGINVVEAERWVRNDRTVLANLLLAHDKVDAVICGTGGRFGHQLGMVEK IIGRRDGARALSTLNALVMAKGTIFIADAYANLDPTAEDIAEIAILSARAVRRMGVTP RAALISHANFGDRPSPSAVKMRQALDLLRGTSVDFEVDGEMHVNAALDPAQRERAYAH STLKGPANLLVMPNADAAHIALNLLREMGEGVSVGPILVGAAKPVHIASQSVTVRGLL NLTALAAVDAAKNSA" gene complement(18677..19885) /locus_tag="MED193_00090" CDS complement(18677..19885) /locus_tag="MED193_00090" /note="COG3135 Uncharacterized protein involved in benzoate metabolism" /codon_start=1 /transl_table=11 /product="Benzoate membrane transport protein" /db_xref="CDD:5636" /translation="MSDAIGYRRPRLSDISGSAIGAGFLAVLVSYAGPLLIYLSAAEA MGIGKEAFSSWVFAISVAAGLSSIGLSLWFRVPIAMAWSAPGTVLLIALGTSLSPAEM VGAYIAVAAVLVLIGVSGVFERLVQFLPPSVTNGMMAGILFGFGLKAAGGLASDPAAI GLLIAVFAMSAVIFPRYAMLVLLASALLISAVFYDASVGTVSLAFASPEVTGATFSTG AMLSLALPLLITTLSGQYLPGMAILRASGFSVSANPILIVGGLVSVAGAFLGGITTAL ASITAAFCAGPDSHEDPDRRYVAGVACGVFFCLGGLFAGSIVEILILLPSALIALLAG LALLQPILKFTSAMLASDDVQAGLLTFIFTASGVSLFGIGAAFWGVVVGIAVHFLTKA VTALKNGTKT" gene complement(19878..20501) /locus_tag="MED193_00095" CDS complement(19878..20501) /locus_tag="MED193_00095" /note="COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit" /codon_start=1 /transl_table=11 /product="3-oxoadipate CoA-succinyl transferase, beta subunit" /db_xref="CDD:11765" /translation="MPWDRNQMAARAAQELEDGMYVNLGIGIPTLVANYVGDKDITLQ SENGMLGMGPFPFEGEEDPDLINAGKQTITELARTSYFDSATSFGMIRGGKIAAAVLG AMEVSEKGDLANWMIPGKLVKGMGGAMDLVAGVGRVIVVMDHTNKHGDSKVLKECTLP LTGKGVVDRIITNLGVLDVTNKGLHIVECADGVSREDIVKATEATIV" gene complement(20501..21205) /locus_tag="MED193_00100" CDS complement(20501..21205) /locus_tag="MED193_00100" /note="COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit" /codon_start=1 /transl_table=11 /product="3-oxoadipate CoA-succinyl transferase, alpha subunit" /db_xref="CDD:11499" /translation="MKKVYGTAAEALDGLLHDGMLIAAGGFGLCGIPELLIDALVDSG VKNLTVASNNAGVDDFGLGKLLATRQIKKMMSSYVGENAEFMRQYLAGELELEFNPQG TLAERMRAGGAGIPGFYTQTGVGTQIAEGKEVKVWGEKEYILEEGIFADLSIVKAWKA DDTGNLIFRKTARNFNPPAAMCGRFCVAEVEEIVPRGSIDPDHIHLPGIYVHRLIQGA HEKRIEQRTVRKREDA" gene complement(21202..22062) /locus_tag="MED193_00105" CDS complement(21202..22062) /locus_tag="MED193_00105" /note="COG3246 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:24077" /translation="MTNPCIICVAITGSLPTKANNPAVPISVSEQVESTQEAFEAGAT IVHAHVRNDDETPSSDPDKFAALKEGIEKHCPGMIIQFSTGGRSGAGQTRGGMLSLKP DMASLSVGSNNFPTRVYENPPDLVDWLASEMLKYDVKPEIEAFDLSHILKAKDMADKG QLAGTPYVQFVMGVKNAMPVDRDVFDYYIHTVHRLFGDDAPWCAAGIGANQLKLNEWA IAAGGHARTGLEDNVRLDRDTLAPSNAALVRRAVEICNRNNRPVASWQEARRILGLRL SESAEKGHAA" gene complement(22123..22200) /locus_tag="MED193_00110" CDS complement(22123..22200) /locus_tag="MED193_00110" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MFFTDEERQAAEASTTAPSLVDEHS" gene complement(22296..23153) /locus_tag="MED193_00115" CDS complement(22296..23153) /locus_tag="MED193_00115" /note="COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /codon_start=1 /transl_table=11 /product="putative hydrolase" /db_xref="CDD:23022" /translation="MSIEPITGRYVTVMIEGAPRRIYFEEAGQGRPVICLHTAGADTR QWRHLMNDAEITTSNRLIAFDMPWHGKSLPPEGFETQEYLLTTEAYIETILAVIDGLG LDRPVLAGCSMGGRIALQLAALHPEKFSGFIAIEASDFQPAWYDIDWFHRPDAHGGEM GAALVSANISPYAPASERWNTLWMFMQSGPGVFRGDLSFYTKDDSLIPRLPTIDTAQT PVHIIVGAYDLTCTPEDAERTAKAIPGATLSVMDELGHFPMSEHPEGFRPFFVEALEK MPKRAAEAA" gene complement(23150..23551) /locus_tag="MED193_00120" CDS complement(23150..23551) /locus_tag="MED193_00120" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNAWETKVINTFKQIQTRLEATPHLQRLGRLFSETVLIEIDGNE YYLTFEKGHIVSVVEGPSRKTPWRFALRTDAEALDKFWQARPEPGFHDIFGLVKIGRG RIDGDILSLVKNLRFFKEVLGLARAKEEVAA" gene 23797..24672 /locus_tag="MED193_00125" CDS 23797..24672 /locus_tag="MED193_00125" /note="COG3485 Protocatechuate 3,4-dioxygenase beta subunit" /codon_start=1 /transl_table=11 /product="dioxygenase" /db_xref="CDD:25612" /translation="MGIVNQDNITDVVIDSLGKHGDITDREREIATGLIKHMHAFVKD VKLQHDEFLAACDYLARAGKLCDDNRQEFILLGDILGIEVLVDMMTNPVEGGESESTV LGPFYRENPPVLPKGASTIQKHFDNEETAYFEGYIKDENGNGIAGVTLDVWEDAPNGI YENLDPDQPEYNLRGRFETDENGHYAFVAVRPVPYPIPDDETAGELLRFMGHHPNRPG HMHFIISKDGYRPLISQIYDADSAWLDEDSVFAVKESLIGKFKPADKDLGTDLHFEFD FVLKEGVSEQAVAAE" gene 24769..25668 /locus_tag="MED193_00130" CDS 24769..25668 /locus_tag="MED193_00130" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator CatR" /db_xref="CDD:10453" /translation="MNFKQLTYFIAVAEELHFGRAAERLDMAQPPLSRQIKQLEDELE AILFNRGRSAITLTQAGERLLKRGKAIVAQLEDTRLEVRRLGQGAEGRLRIGFVGSAT FGILPNIIRSYRANYPEMNLSLTPMNNAQLYRALVSREIDVAFARPTLKDPEFLSKHL VEEKLILALPDIVDTGNRTVAKLERLMTHNLILYPERPRPSYADMVIKAVEDAGFKAP MRLWCMDLQTALSLVAVGEGVCIVPESVSNAPRKGMKFLNIEPEIARTELSVNYRVDE QGVHVKNFVNIAQKVARKSPVKK" gene complement(25787..26566) /locus_tag="MED193_00135" CDS complement(25787..26566) /locus_tag="MED193_00135" /EC_number="1.3.1.-" /note="COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /codon_start=1 /transl_table=11 /product="cis-diol dehydrogenase" /db_xref="CDD:25396" /translation="MTRRFEDKVMVVTGAAQGIGRRVAERAASEGASVLIVDRSPARK DVVTAIRDAGGTAEAISVNLETWAGCEKAMQKAVDLWGRIDILVNNVGGTIWAKPYEH YEPKQIEAEVRRSLFPTLFCCRAAIEHMLPCASGVIVNVSSIATRGLNRVPYAAAKGG VNAITASLAWEVAERGIRVVATAPGGTEAPPRVVPRNPNAEEEQREDWYQTIVDQTIQ SSLMKRYGTLDEQVGPILFLASEDASYITGVTVPVGGGDLG" gene complement(26563..27585) /locus_tag="MED193_00140" CDS complement(26563..27585) /locus_tag="MED193_00140" /EC_number="1.18.1.3" /note="COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases" /codon_start=1 /transl_table=11 /product="benzoate 1,2-dioxygenase ferredoxin reductase subunit" /db_xref="CDD:10746" /translation="MTTYNIALNFEDGVTRIIQCDDDEKVTDAAFRQKINLPMDCRDG VCGTCKCFVEKGEYELEFYMDESMSDEEAEEGYALTCQMTPESDCVVRVPASSAICKT APEAVEAEVQGVDQLSETSFGLRVKLSKPIGFLPGQYVNLTVPGTDKHRSYSFSSAPG ADEATFLIRNLPGGVMSSYLGGQVKAGDALTATGPMGAFYLRPIERAQLWLAGGTGLA PFLSMLEQVAEQGSDQPIVLYYAVTRAADLVELDRVNALAEKIGNVTVITILAAEEDA HERKGFVTDHVTAEDLNDGDCDVYLCGPPPMVDAVRTHFDELGVAPANFFYEKFNPTE AAEEAA" gene complement(27658..28185) /locus_tag="MED193_00145" CDS complement(27658..28185) /locus_tag="MED193_00145" /note="COG5517 Small subunit of phenylpropionate dioxygenase" /codon_start=1 /transl_table=11 /product="BENZOATE DIOXYGENASE SMALL SUBUNIT" /db_xref="CDD:14601" /translation="MNTATLERNDAATAMSYDEIQAFLFAEARALDDREWDTWLTFYH KDCPFWMPAWDDYDTLTEDPQNEMSLMYYPNKQGIEDRVFRIKTDRSSATSLPEPRTN HYLSGIEVLSREGSEIKLRFNWQTLSYRYGKTDQHWGTSFYTIDTSGPKPLITDKKVV LKNDHIHHVIDVYHT" gene complement(28198..29586) /locus_tag="MED193_00150" CDS complement(28198..29586) /locus_tag="MED193_00150" /note="COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit" /codon_start=1 /transl_table=11 /product="benzoate dioxygenase, alpha subunit" /db_xref="CDD:13782" /translation="MFTQSNLDEFEARLDGAIQDDPENGIFRCRRDIFTDEELFELEI KHIFEGNWMYMAHESQIPEPGDYFTLTMGRTPVVITRDKDGELHALVNACSHRGAQLC RFKRRNQKTFTCPFHGWTFSNTGKLLKVKDPKGAGYPEQFNKDGSHDLTKVARFESYR GFLFGSLNADVKPLEEYLGEARKMIDIMVDQADEGLEVLRGSSTYTYDGNWKLQAENG ADGYHVSAVHWNYVATTAHRTDDGKEDNIKATDASKWAKQRGGFHAYENGHILLWTEW ADPTNRPGYPRLEEWTEKFGKTKADWMVGVLRNLCLYPNVFLMDQFSSQIRVFRPISV NETEVTIYCIAPKGESQEARTRRIRQYEDFFNASGMATPDDTEEFRATQRGYAGASHA KWNDLTRGATQWIEGPDEDAKALGINPVMSGARTEDEGLFVIQHSNWSERMGEAIAKE RETAPGAAVAAE" gene complement(29658..30857) /locus_tag="MED193_00155" CDS complement(29658..30857) /locus_tag="MED193_00155" /note="COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily" /codon_start=1 /transl_table=11 /product="Mandelate racemase/muconate lactonizing enzyme" /db_xref="CDD:24520" /translation="MGGQSASQRNFADVVNPVTKIDQIETLILDIPTIRGHVLSMATM RTQTAVLVKIKFSDGSEGIGEGTTIGGLSYGAESPESIQSAIDTYIAPALIGRGADDV NGAIQLVDKIVKGNRIAKTAVEIALWDGLGKRLNVPVSQLFGGAVHDKLPVAWTLASG NSDTDIAEAQEMIETRRHNIFKLKIGKRSVRDDVAHVARIKEAVGDAASVRVDINTAW SLQDARWGLKGLQDAGCELVEQPVPARYRKAMAELTSGYEIAVMADEALNGPEDALEV AAAHAADVFAVKIGQSGGLKRASEVIAIGQSAGLGLYGGTMLETGLSTAAALQLFSTV EDLAWGTELFGPLLLTEDILAEPIIYCDFCVDIPKGTGIGATLDPDKIDFFRRDGGRT IKAVAGQ" gene complement(30997..31962) /locus_tag="MED193_00160" CDS complement(30997..31962) /locus_tag="MED193_00160" /note="COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog" /codon_start=1 /transl_table=11 /product="ornithine cyclodeaminase/mu-crystallin family protein" /db_xref="CDD:12077" /translation="MLIIPEQEIADLMTRAAAFEAVESVFAAMASGDAYNFSVVREAI GHEDALYGFKGGFDKAGLTLGLKAGGYWPNNLEKRGLINHQSTVFLFDPDTGKPSAMV GGNLLTALRTAAASSVSIKHLARENATVIGMIGAGHQATFQLRAALEQRSFEKVIGWN YHPEMLPNIEKVAREAVLPFEAVDLPGMVEADVIISITSAFAPSLMAEHVGPGTHVAC MGTDTKGKQEVEAALLARATVFTDEVAQSISIGEAQHAVAEGLIEQSDIHQIGAVING TNPGRISDDQITLFDGTGVGLQDLAVASAVVDLAVEKGVAIEVDF" gene complement(32078..33244) /locus_tag="MED193_00165" CDS complement(32078..33244) /locus_tag="MED193_00165" /note="COG3616 Predicted amino acid aldolase or racemase" /codon_start=1 /transl_table=11 /product="threonine aldolase, low-specificity" /db_xref="CDD:12940" /translation="MKDSIDFDAYEVGFDIPAKPGMDAADIQTPALVLDLDALERNIK KMGDYAKAHGMRHRAHGKMHKSVDVLKLQMEIGGAIGVCCQKVSEAEVFARAGIKEIL VSNQVRDPGKIARLVQLPKFSGGEVIVCVDDVASVADLSSAAKNAGTELGVFIEIDCG AGRCGVTTTPAVVEIAKAVVAADNLTYRGIQAYQGAMQHMDSFDDRKAKIDTAIRQVQ DAVNALKDEGIETDLVSGGGTGSYYFESNSGLYNELQCGSYAFMDADYGRILDQDGKR IDAGEWENAFFILTSVMSHAKADKAICDAGLKAQSVDSGLPFIYGRDDVEYVKCSDEH GVIADPKGVLKVNEKLKLVPGHCDPTANVHDWYVGVRNGKVETVWPVSARGRAY" gene complement(33259..34212) /locus_tag="MED193_00170" CDS complement(33259..34212) /locus_tag="MED193_00170" /note="COG1171 Threonine dehydratase" /codon_start=1 /transl_table=11 /product="pyridoxal-phosphate dependent enzyme" /db_xref="CDD:10889" /translation="MYIPTYDDMLAAHVRIAPHIRRTPVRTSDYLSDLAGCQLFFKCE NFQEPGAFKVRGATNAVFGLDDAQAEKGVATHSSGNHASCLSYAAMLRGIPCNVVMPR TAPQAKKDTVRRYGGKITECKPSTTSREATFAEVQAKTGGDFVHPYNDPRVIAGQGTC SKEFMEQTDGLDMVVAPIGGGGMISGTCLTLSTLAPQTKVIAAEPEQADDAYRSFKAG HIIADDAPKTIADGLLVPLKELTWHFVSNHVSEIYTASEQEIIDAMKLIWKHLRIVME PSSAVPLATILKNPDAFEGKRVGIIITGGNVDLDKLPWALG" gene complement(34212..35495) /locus_tag="MED193_00175" CDS complement(34212..35495) /locus_tag="MED193_00175" /EC_number="1.4.99.1" /note="COG0665 Glycine/D-amino acid oxidases (deaminating)" /codon_start=1 /transl_table=11 /product="D-amino acid dehydrogenase small subunit" /db_xref="CDD:10534" /translation="MTRIAVIGAGITGVTTASSLMDRGYDVTLFDRNRYAAMQTSFAN GGQLSASNAETWTRWSTVFKGMKWMLSRGAPLLVNPKPSWHKYSWMAEFVASIPQYRA NTVETTRMAIAARGLLRDKAERHGFEFDCENRGILHIYTDKSEFDHATEVNTLLAEGG LDRRAVAPEEVRQIEPALSGEFYGGYYTESDFTGDIHRYTTGLAKSIEKGGAVLRFGT DVEALAVDKKEVRLTWSRNNESQTETFDGIVVCAGVESRAIAAQVGDRVNVYPVKGYS ITVRLDDEESQSAAPWISLLDDEAKVVTSRLGKDRFRIAGTAEFNGYNMDIRDDRIRP LVKWCERFFPDVSTEHAIPWAGLRPMMPNMMPRVGQGARDRVFYNTGHGHLGWTLSAV TAEMVAETVAASNTVNCSKTTSARTPTTLASQGAV" gene complement(35731..36219) /locus_tag="MED193_00180" CDS complement(35731..36219) /locus_tag="MED193_00180" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15281" /translation="MQSDKTFKNERLTYRLNIVAQEAIQANDEIFLSETGCRIRDLRV LRLIDDTPGTTFAKISKITGFDRSLTSRIIQNLIASGLIERENSTEDARVFLLSTTSK GKKVRQVARRLSDRLEVILTDPLSAQELRAFNEILARLGAWVTSEDYQSALTQETNKG SR" gene 36366..37556 /locus_tag="MED193_00185" CDS 36366..37556 /locus_tag="MED193_00185" /note="COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase" /codon_start=1 /transl_table=11 /product="hippurate hydrolase" /db_xref="CDD:11187" /translation="MFTTWYETQSRTSQNWLQTLHRHPETGFEVARTAAFVADRLSEL GYTVVTGIAGTGVVGTLHGQDASPESPGRCIAFRAELDGLPMQEKAKVDYASEDPSRF HGCGHDGHMVTALTAAAYLAEHRQFDGTVRFIFQPAEELLTGARAMIADGLFDRFPCD EIYALHNSPDLPAGQVGIPTTAALSSADNIDVTIRANGAHGSMPHTGEDAILAAAQLI TSVQQATTRLVDAREAGVISFGLFQGGTARNILPEAVRLEGTMRTTSSTVRDRLADLL QDAVRATELLFGVLIEIDVEKVAPVTLNDPTCVSAAVSSATRVVGVERVVENARNLMA SEDFSELSSIVPGAYFFIGQGGYAPHHPEFVFDPDIIPVGAAIFADLAKLRTSKTLNS HKLT" gene 37585..38622 /locus_tag="MED193_00190" CDS 37585..38622 /locus_tag="MED193_00190" /note="COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="putative extracellular solute-binding protein" /db_xref="CDD:11350" /translation="MINFTTKMLKGAVAATALVSATAQIASAEVLTMSSWVPPTHFVH TDFLVPFTEKVAEVTEGRVTVTILPAPLASPPQHWELARNGVADITWGNFTYEPERFV SMWFAEFPNAGTNAEAQSRALWQTYETYLADNAAFDGVKMLGVGMFGGGQLHHGSETV TSPEDVANVKFRMGGPIQEKLLTSLGAVPVAAPATKAYEMLESGVIDGSLHTMESVVN FRLEDSLKHHTIFPNGFYDATFFVIMNGAKWDGLSDEDKAAIEGIIGEELSAAWGKNF DLQNPAATEKLGAAGHDIVEASPELIAAVDTIYDTMVADWVEAAKAAGVADPQAMLTF YNDTYKSLAGE" gene 38690..39190 /locus_tag="MED193_00195" CDS 38690..39190 /locus_tag="MED193_00195" /note="COG3090 TRAP-type C4-dicarboxylate transport system, small permease component" /codon_start=1 /transl_table=11 /product="putative membrane protein" /db_xref="CDD:9849" /translation="MQSMAWKIRRGVETVMALFLLAMVALTFADVIGRRIVGKPIYGA NDITEHLMALVVFAGLPLVTAAGAHLTIDLLDKLVSKPWMAWWRVLISILVTVVLAVI AWLFVKHGLNASRIFEVSQALRVPRGPLYFFMAASCALSALAALAVTFTGPMVDPEDT HEEEAL" gene 39187..40479 /locus_tag="MED193_00200" CDS 39187..40479 /locus_tag="MED193_00200" /note="COG1593 TRAP-type C4-dicarboxylate transport system, large permease component" /codon_start=1 /transl_table=11 /product="TRAP-type C4-dicarboxylate transport system, large permeasecomponent" /db_xref="CDD:11306" /translation="MIVGSIAMISAILLAFLRVPLAFSLLAVSVAGIGFAINWNIAFQ LLPLTISDAVLSYDLAVVPMFILMGNVISKTGIAHDLFRAAYAFVGHVRGGLSLSTMV ACSGFSAVCGSSYATAATMAKVAYPSMKKYNYSDELAAGTIAAGGTLGILIPPSIIMV VYGILTQTNIGDLFIAGVIPGLLGLALYMIAIRVVAARNPEHAPQGELTAWPDRLKAL SGIWPFVLLFGLIIGGLYAKLFTPTEAAGMGAGLAILIATFHGRLTWKVLRTVIIDTA YTSVSLYTVLFGALMLSKLLTLSGLAAGVLALVQSTGLEGYALIFAIMLVFLVLGCVM DSMAIILIFVPLFAPIVVSQGFDLVWFGIIVIVVTEIALVTPPVGMNVFVLKAVLPDV PVVRIFKGLVPFIAVDVVRLALLVAFPAITLWLGTTVG" gene 40602..40763 /locus_tag="MED193_00205" CDS 40602..40763 /locus_tag="MED193_00205" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MVSKEPKLPNADEGLAQTKVDEKSTLLARVCKRFWRYTEKTRQM AIKPFKGIL" gene complement(40806..41762) /locus_tag="MED193_00210" CDS complement(40806..41762) /locus_tag="MED193_00210" /note="COG0435 Predicted glutathione S-transferase" /codon_start=1 /transl_table=11 /product="putative Glutathione S-transferase" /db_xref="CDD:10309" /translation="MLVDGKWMENWQPVQKADEQGRFVRQVSSFRNWITADGRAGPTG EGGFEAEPGRYRLYVALICPWASRTLIARKLKGLEDMIEVIVVNPTLTDQGWSFGGFP GAVEDPMFGARYVHELYTRADPKFTGRATVPVLWDMKRNVMVNNESADILRMLDTAFE HLVPSEIRLYPKAYAAEIDALNPRLYNLLNNGVYKAGFATTQAAYDEAMDGIFAMLDE LEELLTGDFLFGDTLTETDIRAFVTLIRFDAVYHGLFKTNRREIRDYPRLWAYLALIA QIPGVRETVDMDRILHGYYSIKALNPLGVVSKAPAHIATLLG" gene complement(41775..42596) /locus_tag="MED193_00215" CDS complement(41775..42596) /locus_tag="MED193_00215" /note="COG3384 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12716" /translation="MQTQSLQDLRDRLAPSDRLPLVFLGHGSPMNVIEDNAYSRAWSV LGKSLPRPKAILVVSAHWMTRDTTLVDVSAMPRTIHDFYGFPEALYAQAYLAPGQPDL AQEVVTLLKSHRAQEDDRWGLDHGAWAVLKFLYPEADVPVFQVSIDMSRGLAHQLDIG RTLSELRNRGVLILGSGNVVHNLRAMRRGGEPLEFALEFDALFADRLADRDFAALADA KNLGTLLPAAHPTVDHYLPALTIAGASDARDDLTFMTDAIDLGSVSMRSFIFHAN" gene complement(42655..43086) /locus_tag="MED193_00220" CDS complement(42655..43086) /locus_tag="MED193_00220" /note="COG2259 Predicted membrane protein" /codon_start=1 /transl_table=11 /product="DoxX family membrane protein" /db_xref="CDD:11965" /translation="MSTNSETNNTDYAALVLRVTSGVAFLAHGWMKVSLFTIPGTVAF FESLGLPGFFAYLTILGELGGGLALILGVGVRAVSIPLIAILLGSVWAHSGFGWTFSN EGGGWEFPLFWAVVQGVILLLGAGAHALRLPVFDRTLGKFA" gene 43165..44136 /locus_tag="MED193_00225" CDS 43165..44136 /locus_tag="MED193_00225" /note="COG0583 Transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, LysR family" /db_xref="CDD:10453" /translation="MQTINKIEMLENDYLQNVLNRAMDRIDQIRAFVATAQTGSFTAA ADQMGISNRLTSKYVAELEARLGVRLLQRTTRRVGLTPAGEDLLTRAPALLDDFDAVL SEVTESSKGFSGTLRVSAPITFGEIYVVGMLARFAAAHPAVSIELRLDDKYLDLASEG LDLTFRLGHFDQASLKVRRLGEFRSVLVASPDYLARCGTPTTPEELSNHACIVDTNRR NPRRWMFRKGGSETIAHVTGRFHVNSASAAVALAISGIGLAYVPSFALRGAVKSGDLV ALLDEYRSESGPVGAAYLEGRTLPRKVRALIDFALSDIKSLKPLQAL" gene complement(44202..44834) /locus_tag="MED193_00230" CDS complement(44202..44834) /locus_tag="MED193_00230" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTGGPRPEIDLAAFLDRRDPGTIEDSAERLEDRARGWLEVMAAA ADLHPITRACMGFHLWSLAGLGQHGDRIEAAVTAARIAVSDGDGAIFAPLAMGGAGGL RASGLPPKRLTGWLDGMNSAILTAMRHLNDIETWTSKTEKEMSRLSGRTPPALRAVLT EWPMISAPMAENLTGASRTAVQRNLSWMEAQGLIREVTRQGRYRMWQASH" gene complement(44861..45268) /locus_tag="MED193_00235" CDS complement(44861..45268) /locus_tag="MED193_00235" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNPQTSNNPDYFDDPLVTTEGGQDASEDDLWFLPGPIEDEPDYL PPGPRAEPPETGVIDEWVNAEACCAARLATVAGRLGALDDRLLRGPEGWRHRLALIEA ADLSWFAGDRVSSDRLALWMSMRLSGVQVDPED" gene 45567..47726 /locus_tag="MED193_00240" CDS 45567..47726 /locus_tag="MED193_00240" /note="COG1475 Predicted transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11189" /translation="MAKTTTRTKPTTVKKSEAAGSAAPEGAADIRMIPLNQLEPSPLN VRKVAASASDDAELFASIRETGIKQNLVVHALSDTRFAVDAGGRRLKALKQLAEDGVI PADHPVPCLIEDERNAILTSTTENLQRAAMHPADQFEAFEAMIAEGRSEDEIALKFGV SVDLVRRRLKLARVAPEIIEQFRAGDLTLECVMAFTLTDDHDRQLAVWNAVKGGYHIH PQSIKRQLTETAHSANSALGRFVGIEAYEAAGGVLLRDLFDDRASAHMENPELLERLA IEKLQAAAKPFEAAWKWVEVHLSVDYGAFRSFGRVYPQDVDPDPELLAEETRLIAREE ELAAQNDGEDWTDAETEEYYAIEPRLREIEALQRERQPYADEDRAIAGVVLTIGHDGA QRVEKGLVRPEDIPAAPKPDETTEDAGGAASPARPNVTPPTSSTPVPTSDPAATLRKA DGISASLADDLRATRQHILRAHLAADFEVAFDAMLYALCEQALGRSYNNEALDISIRP FQAQNREVLHADTVAQKMLEALEQDLATDWMTLEKPEDFRAMSALPIADKQALFAWAT GLAVKPQLSSDNRPSAIIEEIGGRLDVDVAACWRPTAQNYWGRVNKGHAVATARKLIG DDYAEERNRERKGDIAAAMERAFAETAGETEGFDAATVAKTTLWLPDGMVFAGASRSD VVEVPDQVDPEPAADMSDGVSDEEPSSLPAFLSGDAA" gene 47853..48203 /locus_tag="MED193_00245" CDS 47853..48203 /locus_tag="MED193_00245" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTTALDLDPFREAAMIAAQNDAFRRSILGNPPVADAPQGQFVMT RGVAALGPDAQLELTRHVAAFDAFNADSDPQGWHEMGGIEFDGTTVWFKIDGVDAPSH NGIAMCQTGFVGSQ" gene 48222..49256 /locus_tag="MED193_00250" CDS 48222..49256 /locus_tag="MED193_00250" /note="COG3547 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="IS1111A/IS1328/IS1533 family transposase" /db_xref="CDD:12874" /translation="MTDVSILAIDLAKHSFQVCATTAEGVIVFNRKYTRGKLSELLAN HPQCLVAMEACATSHYWGREAQGHGHDVRLIPPIYVKPFVKRSKNDANDAAAIAVAVR QPDMRFVAVKSPDQQAQAMLFRTHQTFTRQRSQLLITLRGHLAEHGIIVAKGNAALIA YEKVLEAEPDLVPDLVLEAARLYFHQIAQLNNSIAAFERQMKDTAKRNDTARRLQTMP GIGPINAAAFLAFAPPMESFKRGRDFAAWLGLVPRQHSTGGKTRLGRVSKMGQSDMRR LLITGATVCLRWAVAKGIDPQSWLGRLLARKPAKMVAVAMANKMARALWAMMTKGQDY SGSLVQYAKM" gene 49763..50059 /locus_tag="MED193_00255" CDS 49763..50059 /locus_tag="MED193_00255" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAKTLDYQITLYPAHRDGAFVVTEFQMMANYPEKRIQAAGMDDL IDKVTQFAMEHGESCSASVRCLAPRKPPGFKRATENLYFNLVDRTAEKRGDAAA" gene 50137..50520 /locus_tag="MED193_00260" CDS 50137..50520 /locus_tag="MED193_00260" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTQATDFYAQMLEAQKRAAEERVETRAALLSELRALGVTSIEVQ YEGYGDAGNVEDVVVTPDTITLTEELRRRVEDFGWDFAYALSPGFENNEGGYGELTWS LETDKIDVSHSNRYIETDTTEHEGL" gene 50522..50998 /locus_tag="MED193_00265" CDS 50522..50998 /locus_tag="MED193_00265" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAHPLHHAESSARKFGGIPDDYQHVHDWFDSSKEHLGLFIHRAH RHHTLGIFEAERLFGRSLTNSAGRVVPIRWIGEQHVREDCQGRIPSLADWLGRIQPEP WMANGRIDNDPTQIGSDPRAAWATAVSNHQTILGFEDWLLKVSVEHVQHRQNRAAA" gene 51104..51733 /locus_tag="MED193_00270" CDS 51104..51733 /locus_tag="MED193_00270" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MHDPVYEEVHQGHNIKIYHDPDSESPREWCNLGTLICWHRRYRL GDSHQHDSPEAFLRNLADVSDQSDLSMDRLRDRAECKAIILPVFLYDHSGLAMNTIGF HCPWDSGQVGFVYMTLADVRNEFGVKRVTKALREKAVDVLRGEIVDYDSYLGGRVYGY VVEQGGEEIDACWGFVGGYETHCLPEARNAVPRSDPHAPPATGALTAYP" gene complement(51934..52092) /locus_tag="MED193_00275" CDS complement(51934..52092) /locus_tag="MED193_00275" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGVVAQTHARLLGHGRACILGTSNETEPTQSNFGDRMANQEKSQ ELRMGICK" gene 52249..56646 /locus_tag="MED193_00280" CDS 52249..56646 /locus_tag="MED193_00280" /note="COG2263 Predicted RNA methylase" /codon_start=1 /transl_table=11 /product="putative methylase/helicase" /db_xref="CDD:11969" /translation="MNAHPHSVQLATEPEAPALPAAAGFAEQLMQAAKTLLPLFEAGR SIDAAALRAAMEEAFGANDTSGTWVWKDAYEAAEVAQILMLSRYGALMQRQAATPHAF LNMIEHLAGLAPSHTRRSEDSVRLQQFSTPLPLAAIVAQAAGFRGDDLVLEPSAGTGM LAIFARIAGARLSLNELAETRRNLLQQLFPEAVVSDHDAASIDDRLDRSITPSVIVMN PPFSAANHVEGQFRQATSQHVLSSLARLAPGGRLLVITGESFRPSTKCFQSTFQRIGQ SSEVVFSAAIDGKVFSRHGTSIDTRLTVIDKRAMGEGETAPVNIDGAYHPTCATTAAL LSAVLTHCPERRSPPPCPTSSALSVPTRPTRTNLHALRNAARQETRALAEERARHPFD DIEMAPLDYLPKAWSEPDGVLQDTVYEAYDLQAIRIDSAVEHPTALVQSAAMASVPPP VPTYRPVLPKTLVADGLLSAPQLESVIYAGNAHETHLKGWFKRGEIEGQLMAAAEGDE GAFRLRKGWFLGDGTGCGKGRQVAGIILDNWLKGRRRAAWVSKSDKLIEDARRDWMAL GGRESDIVPLSKFRQGSDIRLPEGILFVTYATLRSAEREGKASRLDQVTSWLGEGFDG VIAFDESHAMANAAGEKSDRGDKKASQQGLAGLALQNAAPDARVLYVSATGATVVGNL AYASRLGLWGTGDFPFVTRAEFVAAMEAGGIAAMEMISRDLKALGLYLARSLSYAGVE YEMLVHDLTPAQVAIYDNYADAYQIIHTNLEAALQASGISSETGTLNAQAKSAARSAF ESNKQRFFNHLITAMKCPSLIRAIEADLAAGHAAVIQVVSTSEAVMERRLEEIPPSDW DDLQVDFTPRENIMDYLMHSFPTQLFEPYTDENGDLRSRPALDADGNPITCREAERRR DELVEHLGALAPLQGALDQILWHFGGDAVAEVTGRKRRIVKTREGRLKVENRAASSNL GETQAFMDDAKRILIFSDAGGTGRSYHADLEAKNQRLRVHYLLEPGWKADNAIQGLGR TNRTNQAQPPLFRPVATNVKGEKRFLSTIARRLDTLGAITKGQRETGGQNMFRAEDNL ESPYARAALRQFFYKLRAGKIEACSYAKFQEMTGLTLDEADGTMKENLPPIRQFLNRC LALRIDMQDAIFEAFGGFLSAIIEDARQAGTLDVGLETLRAEKFVITDRRVIFEHEAT GATATALTVERTDRNDPLTLPRVKAICADMKGATLCWNKTSKRAALMVKAPAFMDEDG VPILRVKLLRPMATEILALSEFSRSHWEEIDDAMFEHLWQAEVDAVPKFTTSKITLIC GLLLPIWDRLPSDNMRIYRLQTEDGERAIGRLVSQEQLLNVYARLGLDCQIEMTPQEV FAAVMHAKTTLNLLGGYQLRRSLVMGQPRLELIGASGAVLPALKAMGCFTEVIQWKTR VFIPVDGTDVLARVLSEHPVGTSAAGTAA" gene 56643..57689 /locus_tag="MED193_00285" CDS 56643..57689 /locus_tag="MED193_00285" /note="COG0358 DNA primase (bacterial type)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MNARRSIADLSADVADRAESFCRQYFPEGRRQGNYWQVGDTSGA KGQSLAIRLQAQGGRKAGSWQDFATGEYGDLIDLLHERLGSVTLKETLREARSFLGEA PCPAVPHATRNPEPPDAASGKRIARARKLFAVGKPVLGTLAATYLQARGITRLGPALR YHPRIFLWRGEDDSDPPQSAPALLAKITDNRGQITGCARFYLDPSTGGLAAIESPKRI LGQLHGHAIRFWSGKARSDLIVGEGLENTLSVGTALPEFDLASCLTATHLGLFIPPPG IKRIWIARDDDEAGRNASQKLRNHWESLGIACGDLVPTMGDFNDDLRALGKDALRRSL LGAMKAQSLEIEDR" gene 58001..58912 /locus_tag="MED193_00290" CDS 58001..58912 /locus_tag="MED193_00290" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPHQTDIQEETGATSAILDHLALHGATPGPGETDHRPLPQPDEV DLAMATLFETTIGLLNGSQLEDNLEEMLWSLTSIFHRRLTHIQKLLDDNEFEVRESLA VQDGSEVASVELERLQMIGLKLWDHRDAFEQMRDLAVDHFSAATGSPWLPRTGSKVSH RGLTSAVVDSRAYLSAKRRKETEVHCPEGTRIAFSGGDYQAYDLIWSVLDATHAKYPD MVLLHGGTPKGAEMIAARWADTRGVTQVVFKPDWKSHGKAAPFKRNDKMLETMPQGLI ATPGSGITENIVDKARKLGIRIKRIGA" gene complement(58921..59214) /locus_tag="MED193_00295" CDS complement(58921..59214) /locus_tag="MED193_00295" /note="COG2944 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="transcriptional regulator, XRE family" /db_xref="CDD:12292" /translation="MSAFESVSKGLEEALAFANGDLANAKVHEVSVAEVDVAQVRQRT GLSQAEFAKSIGVAKGTLLNWEHGRRQPTGPAQVLLALIAKKPSVVQDLLRGA" gene complement(59211..59603) /locus_tag="MED193_00300" CDS complement(59211..59603) /locus_tag="MED193_00300" /note="COG4737 Uncharacterized protein conserved in bacteria" /codon_start=1 /transl_table=11 /product="RelE-like Cytotoxic translational repressor of toxin-antitoxinstability system" /db_xref="CDD:13877" /translation="MLYVIDTYAAETYMELHMTRLQTVVELPEFQRRAKAIMSDQERE AAINFIAANPEAGISLGGGLRKVRIPRERSGKSGGFRTVYVFGGTHMPIFLITVFAKN EKANLSKTEQAAAVEMSKALVAKYGDAT" gene 60190..60528 /locus_tag="MED193_00305" CDS 60190..60528 /locus_tag="MED193_00305" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:17661" /translation="MTTNCIKFTSTDIETAKGTGSISTLTFDLDITVEPVASTNPMAP THRVLGRSPRGKLVECGGIWKKQNKETGADYYTLTIRDHGFNANLGKAANQDDPSLQA VIPWGPKDVA" gene 60737..62092 /locus_tag="MED193_00310" CDS 60737..62092 /locus_tag="MED193_00310" /note="COG1192 ATPases involved in chromosome partitioning" /codon_start=1 /transl_table=11 /product="replication protein a" /db_xref="CDD:10910" /translation="MSGSLEQFLTDLSRGLERTMVAVNKELTLRQRIKRTWSMRQCAR FLNVSIQYLTKFANSSDDFPAGEYVGRERVFTLSELMHMRALLAASAKRPYDYLAWRK PDAPLPVISFASQKGGTAKSLSAAHFAQYLSLHYGMRVGVMDADPQSTITLYFVGGEG LPQMPDENTASMVDFAGLFQSEDAPYTDHDAQTLDSFFLKTSWPGLRLLPAHGETSEG EIQIARLVREAPSGKSFYRYLRDAIDRWKAGHPPKTLPNELVVEGKVDQQRLDAALTE TLDVIIIDYQPALTLFQLNNVIASTSLVIPQTMKGFDIATLSTFVTGLLGMLQHILAH ERIEIGTGANMLLPTIVQRSNAQDLNHIGNLLEHCPTEILPVFYLRSDAISNASDVYQ SVYEYEPDTPGKRKGINRFIMNADAVNDAIVSRLWPGLERGYADAWMDEFYEDDGEGE A" gene 62089..63111 /locus_tag="MED193_00315" CDS 62089..63111 /locus_tag="MED193_00315" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:424" /translation="MKRSIPRSLVSKATNPDASKERTPGSEGRAEPGDAVSTPFKGAG SAWKSGALAQSQAAVERSRAELCSDILNGRHEISLSPDQISDPMGTDRRQDWMSQEAF RSLVSSIASNGQDTPILVWPEDPDWQPDPLEPSNVTGVPFVMLTGRRRLAAASELGLP LRAILASPDARNAENSKFEMLFLRFRENEERENLSPFERLVSIGEMYETLASGEDKLT AVAFAKKIGVHESLVSRARSVFAAQDQILNAFKNVYDMSFRDLQGALASLERVNTSKP KPKAKPSKLTVKRKVGKRNLSATSVDGNLSIKVAGVPIDQERLEKLGDLVADYLSAEG SGKDSD" gene 63338..64618 /locus_tag="MED193_00320" CDS 63338..64618 /locus_tag="MED193_00320" /codon_start=1 /transl_table=11 /product="replication protein C" /translation="MKHTGWRKPTPGLGVAEQLAQAGERVAVPKTRAFVALKRVGAHI GLKAGDMMLLDTLGAFTQAQDWDEGQRPIVWASNAYLMEQTGFSRSALKRHARRLAEI GVISFQDSPNGKRWGRRDAEGRIVEAYGFDLSPLSARVEEFEELHADLQAERELCQRL KRQITVARRMIRARIEAALSSALRGPWSQFTGLFEELLDRLPRRHEASEQLVRLLTWF KELQERVEAAYLKATGAVKPVENTGNNDIQVMEKTQKMNPREVNSEPHILITKQLNPV ISNSSEREEAAGVVPNAQPEERVDRELEDWVAEVRKKRTALDLPTIMQACPEFASWAR NMGGFLKDWGDLHRVAGQLRPMIGISEHAWNVAQDRLGTQVATAAFALVFEKHSAGEV ASPGGYLRGMVEKAGAGELHLERSFYGRLSEQAA" gene complement(64733..65863) /locus_tag="MED193_00325" CDS complement(64733..65863) /locus_tag="MED193_00325" /note="COG0582 Integrase" /codon_start=1 /transl_table=11 /product="yld, resembles DNA integrases; possible role in plasmid maitenance" /db_xref="CDD:27720" /translation="MEQERQSENNEKSISKPPNGPSVSENNERDHPSSEALSLPSFVA GSGTLDRLVDTARDYARAAASENTLKAYAKDWANFARWCRMKGAEPLPPSPEMIGLYL ADLASGSGPFPTQSASRPLSVSTIERRLSGLAWNYAQRGFALDRKNRHIATVLAGIKR RHARPPVQKEAILAEDILAMVATLPYDLRGLRDRAILLLGYAGGLRRSEIVSLDVHKD DTPDSGGWIEIFDKGALLTLNAKTGWREVEIGRGSKDQTCPVHALEQWLHFAKIDFGP IFVGTSRDGKRASETRLNDKHVARLIKRTVLDAGIRSDLPEKDRLALFSGHSLRAGLA SSAEVDERYVQKQLGHASAEMTRRYQRRRDRFRVNLTKAAGL" gene 65968..67614 /locus_tag="MED193_00330" CDS 65968..67614 /locus_tag="MED193_00330" /note="COG2801 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="transposase" /db_xref="CDD:25582" /translation="MVDRSDINAVDDAAWEQAVAREAVIRRLASKTPPNRAEFLKACR DLGLKRSRLYELISAYKARPVASSLLAAQVGTPTGSRRLPDEIEAVISGAIEEFYKSL QKPSINALQKEVRRRCSQRGLRPPCWTTLRDRVAAIDPAELTAAREGAKASRQRHHPV PGSYQVERAYEVVQIDHTLVDVIVVDRVHRKPLQRPWLTLAIDVASRMVAGFYLTLEP PSVLSVALAIQHLVQPKLDWLEGLGIDADWPAEGLPETIHVDNAKEFRSKAMKRGAEE HGISLQYRPIGAPHYGGHIERLIGTMMGAVHLLPGSTFSSIKDRGDYDSVSKSAMTLD ELEHWLALEITRYHAERHRALGIPPVAAWNEAYERREAPLRRPYDPEGFRVDFLPSTE RMVRRDGIHLFGLRYWDDVLSLWAGRQDRQLRVSYDPRDLSTIFVLGPEGQRYPVRFS DLRHPSITLAEHRRAQAILRERGRALEDEDLIFAVIEEQRALVDAASSRTREARRFSE RRDRALDGVGAYEALDAGPEPRESESVLRDHPGFEVEEWS" gene 67605..68543 /locus_tag="MED193_00335" CDS 67605..68543 /locus_tag="MED193_00335" /note="COG1474 Cdc6-related protein, AAA superfamily ATPase" /codon_start=1 /transl_table=11 /product="TniB" /db_xref="CDD:23845" /translation="MVVNEGTAFAHLDPTYRRFAALPDDERIAWIRADRWIGFDQSGA ALARLENLLTYPPRDRMPCLLIYGDTGMGKTKIVRKFERDHPPKFSQITGVDHRPVVV AQVPSEPIERDLYRELLASMGAPAMTGGTLAREKDICRSLLRTVGAKMIILDEVNGML AGTFRQQRIFLNAIRFLANDLRIPLVCAGTDLARQALLTDAQLAERFEAFYLKPWQND AAFAGLLKSFERILPLREASDLISGEARERIHKLTSGVTARIFRLIETAAEDAVRSGK ERLDADSFGDNLVLPLVSMTQTARRRGKPVQQRVGA" gene 68540..69667 /locus_tag="MED193_00340" CDS 68540..69667 /locus_tag="MED193_00340" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26639" /translation="MMVSARLPVAPRPFMDELLSSWMARVAARYGSEALELVVYLAGQ GGRNAGARQVDDVAPDMELLRLWAKACRVDPERLCRRSLASRYPDRPQDWFLTETVPV CLACFDADVAARRDAYLRGHWRLAEQVVCPPHRTMLLDRCPACLGRLRLSFRMLNGLL RPFCRKCDAILTGGGGETEDPLKADFAAGVLDLQSQISRIVRGNPGRFDRLEHAIRTL WAPLDRDGAARPVLALWYDESGWNCPYEARAAVGRSAPLQHLSVSWRALTLVILHDLF GADLVPGAVLPEAALVLFQRAAPLPWLTDGPDLRTGKGKRTIDAGAERVHRLSKRRVH RLNGNFEGERRFRPNPPMKLKRQEFFWEPIALCPIMQTYWT" gene 69742..70626 /locus_tag="MED193_00345" CDS 69742..70626 /locus_tag="MED193_00345" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKPELEIHKATSDTLPRMPSWVTSIRAETLEDVAFLSGAALATL HLVVRRKDVPQTLLRERLALSSAEACVLLSGRPERARELRDEVHLLRHDDVPGPAGKV YQCWRRAVERPVSLKALHRAIPAQDPSQIAAWLDVGQGSSVNRAALVIEAVLSDVPRA EEVALILADAALAQAMGWEHLVPLLAANLTARDLRMTGDALRRSCHRSLVVSATAAVQ LAHDLARRTARLEAVVPKLRAKGAGEAVQMFLMRDAVMPAALPLSDRGARRLCDRLVE LGVVRELTGRDMFRLYAV" gene 70629..71225 /locus_tag="MED193_00350" CDS 70629..71225 /locus_tag="MED193_00350" /note="COG1386 Predicted transcriptional regulator containing the HTH domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:26185" /translation="MATRPEPDFDRDLDDLPAELRWREWMRRIEAVLFASATPVPRED LARVVGQQASVELLIEDLGADLADRPYELAAVSGSWMLRTRSSYAPAIRAAADVGEQL LDLNEFDVAVLAAVAYNQPVTRDGLKDIFGKEISRDLIGRLFVSDLITTGPRAPRRGA PYTFVTTEKFLVAFGLESLRDLPDREQLDDAGMTRFAS" gene complement(71222..72580) /locus_tag="MED193_00355" CDS complement(71222..72580) /locus_tag="MED193_00355" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIMTQLDRRRFEALAGYTRHPMITLITKELDWFSDPLERVLGTL VWDRVDGDYSWAVFARDAVKKFRAIQANTSYSTSQEAYNALMAAMVENSRKPDEAFHQ NDEDGPAVDFFTPAVDEARFHPSFQILLEDQRYSPAREIIEAMMRYHEDVDGNFVQKF QTAGWDALLWELYLYATFNELRFIRVGTGPTPDFVLRGNEGGLAVEATSVNPSNVGPN DVPEDSEAFKAYLENYVPIRLSNALRSKLNHKPPYWKQEGAEDVPFCIAVQDYHLQGS MRYLTSAATEYVFGVRHWMDSGEHKIARIGTHRYGKKRAQSGFFDLKGAENVSAVIIN PQGTLTKFNRLGIAAGFGDPRVKMVRMGMKRNDTNSQAPFPTPFEEEVGPQSSETWVE GMVVLHNPNARIPLDPDIIPGAAHEFLQRDGSIMSLLPDFHPFVSQSIVTIEDDEKNG TD" gene complement(72836..73474) /locus_tag="MED193_00360" CDS complement(72836..73474) /locus_tag="MED193_00360" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MEPEIVVLGFSKGPTQTGAMASSPHDEIAYKGSRMAVGKILVHI GVVPQPENSDYRGMVDRLISDRNGRFHFGSLVRCTVERFDEKTRNWKGSGGGMLDKFM GTQFGNEVATNCASQFLGALPTKTRLVIMFGLGSKLNYISAARKLVEAARPGNWRMLN EVTYSDGNLTFVHVEHFASQGALIPNWLGINDHPRSEYGRKSREAVQAALAD" gene complement(73823..77008) /locus_tag="MED193_00365" CDS complement(73823..77008) /locus_tag="MED193_00365" /note="COG0553 Superfamily II DNA/RNA helicases, SNF2 family" /codon_start=1 /transl_table=11 /product="DEAD/DEAH box helicase:Helicase, C-terminal" /db_xref="CDD:24402" /translation="MIERFEAAPALRSLKAFQRATVDYVSRRLLIDEDAVRHFLVADE VGLGKTMVARGVIARTIEALQDTVKRIDIVYICSNAAIARQNVARLNVMGEAHAKVLP TRLTMLALELARAGGIKEEGVNFFSLTPGTSLDLKQGGGMKQERALILRLIWDQLKDR KAVAKMLQGYAGAQGWRETRRWIDAQPIEPQIAMQFQSAIAARPALLEDLENCAHAYK GQRLNNTELNRRRDSLVGELRTILARESAEALEPDLIVLDEFQRFTELLHGDSEAAEL ARRLFDATDPDGNQAKVLLLSATPYRILSLRDDAADAGDHYKEFLDVLGFLFGEEHGA KARQELEMEMRRMRNALQMLPSSFEQAKDIKMGIERQLKQVIARTERVSETAERDAMV RDMSAPITLKSQDLLEARAIARVAEAAEAPGTVEYWKSAPYLLSFLRDYKLGQKLEAQ KDSPSETLLAAIRGAGTAQVDVAAVKAYRPIHLSNGRMRALQDIASLNGLDRRLWMPP SLPYFGARIAASKVLVFSQWAMVPDSIAALLSYESERRMGMGDQWGSYTATHSQRLNF RRAKGRLTGLRVLSLVIPSPTLATAVDPLEIFQSVRAMPDANAMRSVVKERLKNFADD LALRFTAAKPSGFLERFRNNADDGADERVANWDWACAASMDISHKRFGTWLAEGRGLD TIVREDGLEAWNEHLAALHEAASEKHLFGSPDRSQVLDHLTDLALGSPANCALRALAR VAPDLGFDHPNMLSAATRIGMAFRGLFNQPESIALLRGSSDEFYWQAVLQYCAEHDLQ SVMDEYVHMLLESEGLSDADPCNAVTRIAEAIDEALSLKPAQIDIKSYKAKRGRIEIQ SNLRMRGRFATRLLQKSQEDGQMQRTDNVRGAFNSPFRPFVLATTSVGQEGLDFHYYC HRLVHWNLPTNPVDLEQREGRVHRFKNHAVRLNVSEKYANDMRLSESESDPWKQMFSA ALSQAKRGGELEPFWLFDGEISIERYALSLPFSREISLMAWLKRSVAIYRLAFGQPRQ DDLMSFLEKAGSELSNDDLAELQINLRPPEI" gene complement(77001..78848) /locus_tag="MED193_00370" CDS complement(77001..78848) /locus_tag="MED193_00370" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTNKTALDPENRALYGEILRAPAGYELDQALATTYTLDFETALV IPATLAFHAAESRQQTLDTPLALLEGLERLAKRIAIFCEAGRIKAMPSGANRLTALLE DTVTEVIAPRGGAFHPKLWALRFKPVTRKGPARLRIALLSRNLTTDTSWDLSLCLDGQ LGQFTNAANDPLVALLLALPNLTPGRNTPRRASQIAQSIAADLATAIWEHPEHIRKIS FAVNGLSQRVWHPRIGSTLGVISPFVTDAALLKLGHKVSNENAYLLGRGEELAKLKSD TLQTFGNVMILDELAETEDGDETEDQGRNVVPARGLHAKAFLTERYSSTEITLGSGNA TTAALINGSNVEVFATLSGYTRDLGTVQQQLSEGSLGRYLCEFSPYELPDSDKEDAAE KRLDGVRRQLAEAGLKLSCYVDNEGRIELSLSAKVPVELSDGIKLHVWPLVTGQKNGT LLSTITKKPKLIGRAALKDVTRWLGVELQDAATGFKRVFTLGTDLIDLPETRTAEILR SIIENQDAFLNYLRLLLGDVSDAAKALFVAGSGGTYSGLFGSMQDAPLLEDMVKALSG DGRQLHDIERLIERLTNPKTGKSDVIPEDFLTLWETFRTVLPKERSRRD" gene complement(78838..80004) /locus_tag="MED193_00375" CDS complement(78838..80004) /locus_tag="MED193_00375" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSFFAWVDFDQADRDRTRRIMDLFDQKDSRDELGLGSVRDALSD LLFPGTSTIQTRLRYMLFVPWIYRMAGATVGTSSARQDKARAYEIRLIDALVRGGETI NVIGSEARDTLKRLPSDVYWAGMLTFGIRRFQGSRTACLELAPGEADALWAAGIPDAP IGFLENGSKIDFTLRPEEADFIRDRLAQQAPDSLLTWLSRQNDAAECNMIWEHPQSSE WPNDIKVLVDHAERFSSLMHGASLLYNLMLSERAAQMQATEESVWHERIEDYTSRLSK WASDTPLETFEAWDMNDLWDQSQRTIHSVKPKTKRFVEDWRLAVANSKGDVAKDFSAR SLVRDREKRLKGLKSRFRNDGALTRWGGASGLTPLSYRWQPVVMNHVRDLTRDK" gene complement(80004..83156) /locus_tag="MED193_00380" CDS complement(80004..83156) /locus_tag="MED193_00380" /note="COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10797" /translation="MTQLSIVPAGAGAGKTYHIQKTLADWVQDGSVAPGRILAVTFTE AAASELRGRVQAELMKRDRISDALEIDHAYVGTIHALGQRLLTEHAFAAGRSPRNRLL SEPERDLLIRMELAKCVGLRPLMENLARFGYRWNFLTGASAEDAFRSDVLRTVDLIRG LGDRGSDPEILAPAIAALKKGYGPCAPDGAALSAALRRTVVALLDMFPESLGTILECN ATAKKAFISDHQNLRKAAQNETLETDWALWQKLRGLRKSMRGSPTPEGYDELAEAVTV SADELLRHPRPLADACAKVNALVIGAQEVLEAYQAAKRKAGLIDYADMIVETETLLRT QPDILAAVLGEIDCVVIDEFQDTNPVQFALLWQLAQGAKRALIVGDTKQSIMGFQGAD ARLSQALQDFHASAVTPLDRNWRSDPRIMGFVNALGPVLFPQGYNALTPVREETGEPA LEVINLPGGRSDSTAGCVADRIARILAGNTHVFDKVTKAMRPAKASDIAVLCYTGSKC EAVAAAIEAHGHPVRLQQSGWLGSLAMRVARAALAYIADPSDRLAALTWLTLGPPRMP IEDALRNAVDRVLDTHTALVPLAALHEAEQQRPVVDTVAEMLRSTNLREWAAGIDGPA QALADLARLEAEAQTFDSLATDLRSAAGFHGYGMQIFLGWINAQTDKAWDKHPDPDGW SSSGIEISTWHSAKGREWPITIIAGLDRAFAERPGTLSAEFDGFKDLGNVLSHANLGY LPKFDAPETQAVFAEAHQEQDEQEAARELYVALTRARDRLILALPREKTKARDSAERM VDLLRDRGGLQSGAGFLEVCGEQFVANVTDGASDVPEVEPTSASLGYPRFGTSRQNVD APHTPWRQSPSTQEPIASQAPAVIDTVKLGAAIDTSDAVFASAADRGTILHLAFRVLT NQPNLSERLIAATGLAPKVIDEIATQAKILRNRLAAEGYDQLHFELPVQDIRPDGSQT NAIIDCLAEGPDGFLILDHKSGPCPDPEARFHAYLPQLKSYAQLMALTRRDKPVRGLA INWIDEGRLSLCSVDTMEFI" gene complement(83156..85747) /locus_tag="MED193_00385" CDS complement(83156..85747) /locus_tag="MED193_00385" /note="COG2887 RecB family exonuclease" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12238" /translation="MRIDPLLTASPVTDAVRHLTDDLLKEIYLAPLGKPLALQDLLTG NNAPWSESFSAAPAETIAAVEDGLLTVMRATRTLDPNEINLSTLPEGRARTHLTALID LWHKLDGLPAPFSTWAHVLRSNASDALEALPILDYVQCPFADPAETALAEALQAHHGT APLEAALAWRNLAAAHDAFANGALGAIQAGLGKTASEVSPDETIEIFGLRDPREEAEF AAARVQSLLDAGIVESPAQVGLLVPDDASYQRALEEAFDRVGLPLSGKPIEPALRDTV GELMILLLALLERPAPRTAIASLYISPTMPWAKETGLRMAREQMDYGWSRTAAGLDGP ARELLDALRPCSTPEQLFGRLTAIAKAAPEAGLWPKLQAIRTAVVDQIDWPLLRSIAL PRPSEPSGHNRFVEGVSLFAETALPWRPVRQLIVLGLAGRTWPRPPASNPFFTESEIV LIREKTGLYLAGRQQKMARGVELFRRQLCAASEAATFLVPSCTLGGEKLASSTGLSLI THMMGFESSEKAIRDIHAEDQSLWPVAAEAPLPIASGGKPSVPAIGLLHLGSDLLRLR EDDETGHAPQSPSRLETLIVSPLAWLLDELGAKDRTWAPETLDVMALGTLLHHVMEVV FPEGTKMPDQTIIANAVPAAVDDAIRRYAAWLSNDAWDTERQSLLREAYNVTSNWVVF LHETQAEVLHNEIRLAGDHGGLLLRGNADCLLKLPDGRILIIDHKRSSSGGRRDRMAK GWDLQVALYQAMLERPSIQTALTDLVAQGADIVTAYHTMLDGTVLSDAAGAGLPRVEH ASIDASKQAMDHLAQVVAEVGGGTIRLNHEDDAAALKKDRGITAYALEDNAFVSAFLT SNDEGDQ" gene complement(85781..86506) /locus_tag="MED193_00390" CDS complement(85781..86506) /locus_tag="MED193_00390" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAEWNLPEMMSSLHNGIQNELHTARKALAHPGTKGDASEQVWLE LLQTYLPKRYQVESAHVVDSEGNFSDQMDVVVFDRQYSPFIFNFKAAKIVPAESVYAV FEAKQTMDAGLLKYAKDKISTVRQLKRTSLPIPHAGGEYSAKPPIHILGGMLSLESEW SPPLGGSMVKNLGDPTAIGHLDLGCIASHGYFGLDRKSQDYEIHPGAKPATGFLFHLI SELQFSGTVPMIDIKAYARWLNV" gene complement(86578..87516) /locus_tag="MED193_00395" CDS complement(86578..87516) /locus_tag="MED193_00395" /note="COG1223 Predicted ATPase (AAA+ superfamily)" /codon_start=1 /transl_table=11 /product="ATPases of the AAA+ class" /db_xref="CDD:25355" /translation="MNAQGQNIALFERTMLLPDPEAQERLSRLVGLDDQKLRLSKMLG TLINSAGLVAWASRFHPGAEDFVSDILRRPPLVVLSGDVGSGKTELAETIGDMVARQE DIEITLLPMSLSTRGQGRVGEMTQMVTAAFDHAVQEASKLVSSQGKARGGVILLIDEA DALAQSRESSQMHHEDKAGVNAFIRGIDRLANGSLPAAVIMCTNRLSALDPAVKRRAA EILVFGRPELEQRNLVLSSALTPFGLTAVEIEALVDATGETNERNHGFAFSDLTQRLI PSIILDAYPSSKVTASRALKIARQTIPTPPFQDGVS" gene complement(87513..88031) /locus_tag="MED193_00400" CDS complement(87513..88031) /locus_tag="MED193_00400" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTMSFTHTESQTFTITHARHMASKMATDLKRIQRFYNDPSDREI DDYEGELTALLKAGYLREVTYGFQRNGNWIEPTVTYTALDLNGWNGVDDDPGKIRPRA NVSGASFTSFLTYSSAWSQLTENQKTDFKRGLPITRGYGDVPGVSGYLEQDRSYSAGG RALNRSSVRSWT" gene complement(88041..89006) /locus_tag="MED193_00405" CDS complement(88041..89006) /locus_tag="MED193_00405" /note="COG1746 tRNA nucleotidyltransferase (CCA-adding enzyme)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11457" /translation="MSRDHIGHAEIAKFGTDKINLPKDKADKFRMQARNLRDKLEGYL KDHPDFALRKMLLSGSLAKGTGLRTLNDIDVGCYISGSDVPSDIDALMEYLAERLRKA FPNFKPEQVQPKTYCVTVSFLGSGLDVDIVPILYDGDPDWYGNLVNQEDGSFLRTCVP RHLEFIRKRKTLADKDFAQVIRLVKYWVRKEKREKDGFRFKSFMAEMVLSKMLDEGQD FSDYPEALQAFFSYIANSGLNERIIFDDYYPKSTAKVFGTPVEIIDPVNAENNVSQLY TQAQADDIVDAALDAGDAIETALRCPTKQDTIRHWQRVFGSAFQG" gene 89152..90084 /locus_tag="MED193_00410" CDS 89152..90084 /locus_tag="MED193_00410" /note="COG2378 Predicted transcriptional regulator" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12050" /translation="MGEIDGAKALKKAKWNVKKRLEFIEFRLFWDAKLNRKDLVDTFG ISAQQASADIATYEEMGPQNLAYDSAQKTYLRTDRFSPKLIGAWTHRYLLQLVAIENG WMDAEDTWFEEEQPVEIKTLTRKRVDSQVLMSVLDAIRGHKSLEMFYRSMTGSTASDR LIEPHALSYNSGRWYVRAWSAEHNDFRDYNLNRIERAKAGVPASIDRALDFQWHHTID LIIVPNPKLPKERQAAVEYEYEMSNGRIEVNCRLSVSFYLMSEHNLDVEPGVLDPLKQ QLVLENKDEVLQTRKVARKLSKDALKRIGGSGHL" gene 90081..90761 /locus_tag="MED193_00415" CDS 90081..90761 /locus_tag="MED193_00415" /note="COG1708 Predicted nucleotidyltransferases" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:25840" /translation="MILDALLLFGSRARGDHSASSDIDLLAVTDNKKPTVSGSADASL FHYSFDWLRDKASAGDLFVWHLVTEAIAIYDPADNLSALGQEFRFKDDYRKQITHASD VGWLISLLGDEMSAKEANRWLAWAVRTISIAHAATIQKPAFSGSALAEVLGYSDIEVL VRQKDRKTFDDAARRLLKKFLGALGSGEPIHPPHSIDRFRSHFEATENEVGLTILNGR LLGPPYHS" gene 90727..91068 /locus_tag="MED193_00420" CDS 90727..91068 /locus_tag="MED193_00420" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MGGCSDHPTTVKCTSILAVWDAFVFSKFNDGELKDIEYIASKLG QIFDLSDVKLKDQNYGSFQTLSLEVQLLKDPPFFNQKRSTGLDHHSIGSVLFTRLMAS FTLLSGFGSAK" gene complement(91979..92959) /locus_tag="MED193_00425" CDS complement(91979..92959) /locus_tag="MED193_00425" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQNDIDLHAFEIEASCTYRGEDYCVRDNGAVLRRARAAKRKRPL DETWTFGTPSPSDGYMAVSAHKVHRIVATAFNGEPPSKGHVVDHIDTNRRNNRPNNLR WVTRLENILLNPISAKRVEFLYGSIEEFLADPRNPKNGTLTKDFEWMRAVSPSEAATS RKRMLDWAQSDRPSGSGTLGDWIFGRDATPEEEPTEQLVTSKTPGAVQRNWRVPAEFP LCPDTTEEMPLDTYYRRLKEGSVAVVTPFDQTIVGKAAKSADCTALFILGAHGEGAIK PWSLAQVTFEDNTFVHESLGTFFTKEGAEKEFTLAQGLPWEGGETFDDFC" gene 93006..93152 /locus_tag="MED193_00430" CDS 93006..93152 /locus_tag="MED193_00430" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MIALVGLDCFYLFLPALQFKGMSQIFLYTSFAEAAADPHNLQGF KSLL" gene 93625..93963 /locus_tag="MED193_00435" CDS 93625..93963 /locus_tag="MED193_00435" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:17661" /translation="MTTNCIKFTSDDIETAKGVGSISTLNFDIDITVEPIASSNPMAP THRVLGRSPRGKLVECGGIWKKQNKDTGSDYFTLTVRDHAFNANLGKAASQDDMSLQA IIPWGPKEAA" gene 94103..94765 /locus_tag="MED193_00440" CDS 94103..94765 /locus_tag="MED193_00440" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MTDDAQPKTLPDLLRARINDAPRQVWTPADFADIGARAAVDKAL QRMVASGQLRRIERGLYDKPAQNALTGKSTVPDYRAVIDAIARRDQVRWLIDGMTAAN TLGLTNAVPAKIEVLVDARLKPVTLGNQKIVFKHAAPSRLYWAGRPGMYLVQALHWLH DVMSNDVEGAVVRKTVRRLLADKKSGSGLADDLKAGLSAMPIWMQDILRAPLFDAAEG DQ" gene 94765..95805 /locus_tag="MED193_00445" CDS 94765..95805 /locus_tag="MED193_00445" /note="COG2253 Uncharacterized conserved protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11959" /translation="MSTAGFQKIIAASAADRADLFLTTANRLGAPLINIEKDFWVCWT LNALYHRLPAGGPRLLFKGGTSVSKAYGLIDRFSEDIDVTVFRDDLGHGASPEELAAL SGKKRKAAIEAIQNDCQAYITGPLLEALSQLIAEDTVGEGRIEIDPDDGTGQTLLVWY PRVDGSDTGYVQATVKIESGAKSALDPNSPQLIRPYISDDLDGIDLDVPDVRTIDAER TFWDKVVILHGLRNWFDTRGELKQDGQRISRHYYDLHCMLETETGKAAVADIELGADC VAHAKTFFNRPDFNLATAEPGTFSLLPSDDMATRLIGDYKNTEAMIFGEAPPFDAILA SIGSLEDQLNQP" gene complement(95828..96088) /locus_tag="MED193_00450" CDS complement(95828..96088) /locus_tag="MED193_00450" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MEHATGDVCCAQSARRQPSRNLAQALQTARLRASDLMGQQVNGK GHNGMIDRTSSTSFPALDRGPFYALKREVAANHTQAKPPRNI" gene 96124..96357 /locus_tag="MED193_00455" CDS 96124..96357 /locus_tag="MED193_00455" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPPVFSTIRPTTINGKDHNMTYEQSLDLAELQADMAFETYLSAF EEGDHPEVIDSLATEALIAQDRCADLRSHDLAH" gene 96869..97591 /locus_tag="MED193_00460" CDS 96869..97591 /locus_tag="MED193_00460" /note="COG0183 Acetyl-CoA acetyltransferase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKTGRPKRLKLEQRIELARRYHAGETPKVLAEAYGVSRRHVTRL AKEEQGEGLAVRDPSERVSFRASASELAAFDAEWQTRGFANRSQALNAVLRGRCGLLD VPRDLVAEFCASWRQAKDVSDAGLALAKAVHRGKISVSLEDRALLVDLLDLAQSMSRE LGQIKDAAQVRRKQDWPLKEEGDAALRAHPEEPARAASGLRLVAGEGGREGARVSVAL APAGGVASKASDAVVDRNISNG" gene 97584..99512 /locus_tag="MED193_00465" CDS 97584..99512 /locus_tag="MED193_00465" /note="COG3843 Type IV secretory pathway, VirD2 components (relaxase)" /codon_start=1 /transl_table=11 /product="T-DNA border endonuclease" /db_xref="CDD:26076" /translation="MADPLALYSSVMGKLWEDERIRGKAAARIDARIAGRRQGRSFGR VGSMSARNVAKAASGQSRAAVFKRIRAGGCKTQASLGNQLAYINDKAVYTYSTMTNAL TEDAVLSEDQKADIIEAWSETWRGSTKLGFTSHMLLSFPTDVTVDQVRDIAVDWTEHF FESGEYGDQWDYVLAVHDDRAHKHAHIILNNRGLDQGTWFSCWAEGVMSPQLMREKQA EIAEGYGVMLDATTRLERGIFEKPAGLAEIYRAKEEARLPREIIMTAEQSAVAQAQVV GFAKDYTEFADLLDRMDQRHLARAVRGMANNLGTVTPWKFTEGEIDMKDIKTVGDAID YSERTIEALRLKAEELDVTERAAFEAKAAPVIADLSQMVPDPELRTRFGKQLEEPYPP GAGSEVLIAALQSGNGDGLKDVLAQADEAGMDGDELVARITAGGTKNYGMAQDWVERD MNAVLSKDGLTVESASDEQLDRALERVDGVMEALTERAKELGVAIGLGLAEEEAADLP LIDEDDRSPNTYLQDLADMLRDGQLSEAQEETVERTLQAELFKELGEEGLGELRRGNY EVLDDVLPSKIDQITVTQEFLEMTFEETGDQVFTDRASSLQQDKATEVAQLKGQQEAQ ALGKDLGRDRGLDDDMEF" gene 99528..101441 /locus_tag="MED193_00470" CDS 99528..101441 /locus_tag="MED193_00470" /note="COG3505 Type IV secretory pathway, VirD4 components" /codon_start=1 /transl_table=11 /product="type IV secretion system coupling protein" /db_xref="CDD:12833" /translation="MNKAFPLWAALPFGAICGAILGTIVASFYLTLALRTGFGNFDML AVWNASTGLRAAHPEAFKVAYGAVGFGSLGLGGLALAWTWKKERDDYGSAHWQTKAEL MKNDMLHEPGEGFVCGKLGLPRSKGGFISSAAIPHVMMVAPTRAGKGVGFVIPNLMAF AGSVVVLDVKGENFEKTSRLRALNGDEVYRFSPFDWSNATHRYNPLSRIAKAPTFAQR FTEVSILADLFLDKDNKTLDTFSEAGKSIFVAACLLAIQRGTANLGEVNKIVAGGEYK NAQYKTYADEAEEAILRELWTNAASASSRLLTSNIQALMTAGLKQWDNPAVRSATQDS DFDFATFRKTPQSLYIAVSEDHIATLAPLLRLMFADLIASIRLKEPGPDEPWPVMMMI DEFQQMGAMPYLERAIHSLASYGGRVAMIAQSLASLDRIYGSEGRESLENGAGLKLYI TPRDQRTVKEVSAAVGSTTREAVTRMYGRNKGILGATSTSARLEERPLLSETEARLMD PDEVIILASPQHPIKAQRVKYFDDPVFKAMDAKQKDMPFPYPPSVEGVGPWGVGSDED RAQGANDTAGHPPARERAERREARGMRVMAEGVEMEQQPTPETLEREADVPKAWERTL DMREEMIEEMLGE" gene complement(101950..102840) /locus_tag="MED193_00475" CDS complement(101950..102840) /locus_tag="MED193_00475" /note="COG1802 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:11512" /translation="MNAKASKSDLQVRLARQLLQLVADGEIKPGHHLREVELSEQFGV SRTPIRATLNFLVGLGAVEKLANRGFFVVAPASVALKTIKQLPKEDDEKLKEQIAKDW FNGKVPKEVSEGEIRTRYDLGKMTASRVLGTLAEEGLVSRMPGYGWQFEPTLNSASAH DESFDFRAMVEPAALLSPEFRYDADRAESLRTRHERVLGGRRQHNLAEIIRLDEDFHE FLAKCSNNRFVVQAVAHQNRLRRLMEYQSLIDAGRLTDSCLEHIGILDNLDRKDLVGA SAALRDHLTRAKQAGPEFND" gene complement(102900..105128) /locus_tag="MED193_00480" CDS complement(102900..105128) /locus_tag="MED193_00480" /codon_start=1 /transl_table=11 /product="large subunit of N,N-dimethylformamidase" /translation="MLPIVGYTNKLTVEPGETIDVMVSSFGAKSYRPDFRQIIQGDTN PDGPGYKDKLIDLDLGGARDAIAKPFLPGSCVLIPDLDALGQIDEFTLAAVVKPSLLD GRRRSIIALPGLAEIGIDEKGRLTGVAGGACLTSATPLSTEHWHIVSLSYSKSDGLLS LAMSQDHDAASEPPRAEVISAPLDRTGETAKECIIAATRGPDGALTGFLDGRVDRPAL FNTVVAPETLRNLLGDFALLRRQRSLLGAWDFSHKMTTQTICDISPYQLHGQIHNAPT RAMTGWLWKGQELDWKLRPDLYSAIHFHSTDMYDAGWDVDFSLTIPKDLKSGVYSVRL VPDGDEDNAYYCVFAVRPPRNKPSGNKVAFLFPTCSYLAYANHRLGMDVPGTEIGMGR AVELDHHHMFLQDNPGIGFSVYETHDDEMGVFHSSRLRPIVDLQPKVKSFLGGFGSNI WQFNADTHILGWLDAIEQDYDVITDEDMHEDGLRLLQRYNVILTGTHPEYYTRNMVEA LQGFTDRGGRLMYLGGNGFYWVVSFNEDMPGIMECRRSEAGIRPWEPGHGQFYHGFTG EYGGLWRRNDHPPNHLCGVGMTSQGFDVSEPYVLSPEATNPRVAFIFDGIEGPKIGDF GLAGGGAAGLEVDRADAVQGTPGHALVLASSTRHTDIYLMTPEDLLDPTPDWSGTQAD IIRADLTFFETIGGGAVFSTGSIAWAGAMAWNSYDNEIARMTANVLRRFNDETPFDML PQ" gene complement(105140..105466) /locus_tag="MED193_00485" CDS complement(105140..105466) /locus_tag="MED193_00485" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MARYQISDSDHPFAREFLAQPIGYHSPGLQRVLNRMRGADWAFK YILVIEERHSKWRLGKLPKARGSKVEMVEGVVYFDLLEAERDIFKRRWMDLTGQDVDA LLSQTG" gene complement(105583..106524) /locus_tag="MED193_00490" CDS complement(105583..106524) /locus_tag="MED193_00490" /note="COG4608 ABC-type oligopeptide transport system, ATPase component" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13764" /translation="MSSVISVRNADVQFSSGPPWAKSVVHALQDVSIDIEPGQIFGLV GESGSGKTTLGRACLGLQGLTNGEIEFAGTPFNQLGRKQLKGQLAAVLQNPRSSLNPA LKVATSVEEPLKINQHAHGPEARKQVDRMLERVGLASGVGDRFPNELSGGQRQRVSIA RALITKPRFILFDEAVSALDVSVQAQILNLIKELQASVGFAALFISHDLAATRYVCDR VVVLYHGRIMEDCGRRLLYGRARHPYTRGLQAASGLIDDDTVHLEVDDKGASPTGCPL AGRCPERMAMCGETLPQAYSAGGGKVFCHLYDEVSER" gene complement(106521..107486) /locus_tag="MED193_00495" CDS complement(106521..107486) /locus_tag="MED193_00495" /note="COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /codon_start=1 /transl_table=11 /product="putative ABC transport ATP-binding subunit" /db_xref="CDD:10318" /translation="MSDLLTVENLTVSYHTKTREVTALLDVSLSLAPGEVFGIVGESG CGKSTFSSVIGHLLGPAGQVESGLVEVAGHNVLALSGKTLRAYRSNDIAYVFQDPMSV LDPTKTLGKQYRRLLGSSDWKQKAIDALNHVGLGDHQRVLSSFPHQLSGGMAQRVVIA MALMRMPKLLIADEPTAALDASIRSGVMELLTKWCSEIGAAMLIISHDIPIISRFCDR IGVMYAGRFVEIGPAAEFITSPLHPYPIALLASEPGHEGEDGVLQSLEGAPPLSISRD RACAFADRCAHRDDVCTSDFPAPVKVGSSTVSCCRIDAIHAEATR" gene complement(107491..108351) /locus_tag="MED193_00500" CDS complement(107491..108351) /locus_tag="MED193_00500" /note="COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="oligopeptide ABC transporter permease protein" /db_xref="CDD:10891" /translation="MNLRPLIHHWLEFHRADRLAGFASLTMATLILAALLAPLLPIDP PDQVAAYPRLSPPSADIVFGSDNLGRNMLSRVLQGIQVTILLATTAVLCSALAGIVIG LIAAYSGKVLDEIISRLSDIVFSFPAVLMGLLITAIIGPGEFAAICAIILVTLPPMVR VVRAAAMDVTGADFVTISKLSGASPARQLLVHILPNIAVPVVTQVAYSISVGMLVESA LSFLGLGSQPPAASLGSLLREGSLYITFAPWLVFAPALFLVLAIWSVNLIGEGMRVFF DPVRARSLED" gene complement(108356..109309) /locus_tag="MED193_00505" CDS complement(108356..109309) /locus_tag="MED193_00505" /note="COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /codon_start=1 /transl_table=11 /product="ABC-transport protein, inner membrane component" /db_xref="CDD:10471" /translation="MTQLLKFIAFRVGSALLTLIGVSIFIFLAIHMLPGSFEDVLAPR GPEELRQQIAEKFGLNQPLPIQYAKWLGSVATGDLGISLITQDPIVDSFASRVPVTIE LALLATFTSAVIGIPLGLWSGLAHRRAGVSGIARVLGSFIMSVPDFVIASVFLFVFSR YSLGLTVGQWVPFQEDFGGHIRSIILPAVTLSAVGIGLFITTTRNAVIGILSKDYIMA ALARGEEPREIVQGHVLRNISNPLVTTLSIYLGYLIGGAIIVEYVYSVPGMGRFLVQG LLNRDYPIVQATVLVIACAVVFINMTADIAYGLIDPRLRKG" gene complement(109313..110917) /locus_tag="MED193_00510" CDS complement(109313..110917) /locus_tag="MED193_00510" /note="COG0747 ABC-type dipeptide transport system, periplasmic component" /codon_start=1 /transl_table=11 /product="ABC transport protein, solute binding component" /db_xref="CDD:10615" /translation="MTNEHHSADLSAEDLRSALTRRSFLRTAAMTGLAAASATGVPGA LYAQGASTMTWAKPLETTMLDPHTAILGSSWQMLHLVYDSLIDVDEELNPIPAIAESW EQESPTSYLFTIRSGVKFSNGADLTIADVVGSLKRVQDPATGSWWVRPMGMIDDVVAV GDNQVRVTLQEPHTPLIAALAATMCSILPMSLVESGELDVSKDMLGSGPYKIVSHEQD DNWVLERNPHYYQQGLPKIDRIVVKIVPSDNTRIAQLRDGSIDIASFEASPDAGLLLR GVANVEVNVEDVTNYYILGLNAVAEDSPFKDIKLRQAVALTLDRELIANIALGGGGQP TAVMAPAHKACDTSKLPLFGQDLDRARQLLAESGNEDLSFELLVRNIPADIQMAQVIA QGVAKIGLTANIAVVDEGIWVQRAWIDNPSKFEAMITWYAGYADPAISTLWWNPGVAG FTAGHVENNDDINAAIDAAYQTGGEARGAVLQNLCAKIDESANVIPLVTRQDTIAYRS DKLKAKLAHLEGYVHTLRNVETFELM" gene complement(110944..112044) /locus_tag="MED193_00515" CDS complement(110944..112044) /locus_tag="MED193_00515" /note="COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein" /codon_start=1 /transl_table=11 /product="histone deacetylase/AcuC/AphA family protein" /db_xref="CDD:24480" /translation="MATGLVYHEICMWHDAGNVSSFVPAGLDVQPDRHAEEPETKRRI RNLLDVSGLLDQLILIKPEPAEISQIARVHPDSYISGIEEASKSGGAEVGLNTFIGNE GFDIARVSTGGSIAIMDGVLNGQMKNGYALVRPPGHHARPTEAMGFCIFANASIAIRE MQEKYQLDRVAIVDWDAHHGNGAEEIFYEDPSVLTISLHQDNLFPLDSGAMSSIGEGR GEGNNINVPLPPGSGRGAYQAAFDRVVIPALQAYKPQLIVVCSGFDACGLDPLARLML HSSVYANLTKQLMECADDLCQGRIAMLHEGGYSRALAPYCGLAVMETLSGIKTNITDP FDEYVSAFGGQDLQPHQEAVVNEARGLVDNLR" gene complement(112155..113129) /locus_tag="MED193_00520" CDS complement(112155..113129) /locus_tag="MED193_00520" /note="COG2207 AraC-type DNA-binding domain-containing proteins" /codon_start=1 /transl_table=11 /product="transcriptional regulator, AraC family" /db_xref="CDD:14970" /translation="MGAMPIHADLIYCTSEFSKASRLEEWRASMSDAYYALDIVEDDR HALDAKIEIVTLSNVCISKFRSTTAKGFRTRKSIAHDTTEHFVFVFVTEGEMFFNQLA RWGTLSAGQYVMLRSGEPYELSCLSPSNAITLHLPVSDVEDRYKLAHLHCAKAIESDA VLFPMAASVMQSVGSVPVSARKAMSHDLRRQVIDTILLLLRAERIQANVDGNDGHLGR LIDYIEQNYANTDLSARTAAQDMGMSVSHVHRAFGSFNLTFGSTLRDTRLAQSYELLR SSEGQNSNIGEIAFKVGFLDHSHFSKSFRTAFGISPTEVQQGASRPGK" gene complement(113357..114751) /locus_tag="MED193_00525" CDS complement(113357..114751) /locus_tag="MED193_00525" /note="COG1012 NAD-dependent aldehyde dehydrogenases" /codon_start=1 /transl_table=11 /product="succinate semialdehyde dehydrogenase" /db_xref="CDD:10741" /translation="MSNAIKCISPVDGSVYAERPATSVTQARSVFAAAKQAQAKWSAL SLEDRCALLHRAVDHFVSHASDIAIEISWQMGRPVSQAAGEIGGLEERARYMIDIAPE ALHQDALPQSGLALRTIRREALGTVFVIAPWNFPFLTATNAVFPALAAGNSVVLKHSA QTLVCGERFAQAFAAAGLPEGVFQQIMPTNADTTTLIEEGHHDHIVFTGSVGVGRYLQ QVNAVNFSGIDLELGGKDPAYVRSDANIGFAAESLVDGAFFNSGQSCCGIERIYVHKD VFQSFVDKVVEHVNAYRLGNPTLPETTLGPVVNTTAADFVRGQVAEAVASGARMLIDP THFPTDQPGSPYLAPQVLVDVTHDMRVMTEESFGPVVGIIAVEDDAQAIALMNDSDFG LTTSIWTSDLDAAEALSAQLATGTCFANRCDYLDPGLAWTGVKDTGRGCSLSSHAYGH LTRLKSYHFRAQPQ" gene complement(114799..116169) /locus_tag="MED193_00530" CDS complement(114799..116169) /locus_tag="MED193_00530" /note="COG0174 Glutamine synthetase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:22916" /translation="MGKQLHLKTVEEVRQYVSEKDPKHIKVGFFDVDGVFRGKFMAQG KFLSALQDGYGFCDAVLGWDVADTLYDNSKFTGWHTGFPDATLRIIPESGVILPFDNE TLFFSSEFSGRAESICPRGVLRRVLQRAHDMGFIAKAAMEFEFFMFQETPDSLEEKGF RDLKNLSPGNMSYSALRSIVQEDLYQDILDTFGSIGIELEGLHAETGPGVVETALAVD GALAMADKASIFKAFMKILAQKRGLMATFMAKWNQNLSGQSGHTHMSLWSLDGAPRFY DANGDHRMSQTMRHFLGGQLAYLREFAAMIAPNINSYARLTPGHWAPTSATWGVDNRT VGIRVIPESEKSHRLEYRIPGSDVNPYLSMAAAIGSGLLGIEQGIEPGDAATGNAYDL DVPTTRQLPTNLESAGILFGASQAANAMFGKAFVEHFSASRIFEAREFGRAVTDWELR RYFEVL" gene 116098..116265 /locus_tag="MED193_00535" CDS 116098..116265 /locus_tag="MED193_00535" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLGILLGYILPNLFDSLQVELFTHHVPVPELEIVVFGKCPERLR QQGGPNSDLPF" gene complement(116188..117012) /locus_tag="MED193_00540" CDS complement(116188..117012) /locus_tag="MED193_00540" /note="COG3931 Predicted N-formylglutamate amidohydrolase" /codon_start=1 /transl_table=11 /product="putative N-formylglutamate amidohydrolase" /db_xref="CDD:13238" /translation="MSVFDQHPWDIGFQEGSVPRRPLLGAKEPTPAKVLNGSGKGPFV FGCEHAGNRIPKSLGTLGLTKAERSRHIAWDIGAAHLTEKLSEKLDSPAVLQRYSRLV FDCNRTASHPGAFVVEADGSNVSGNENLGKEEKLEREEAIYRPFHNTLSEITDRRRWM GERIAYVAVHSFNDQVHGETRPWHVGFLYNQRSGMSRFMIDWFQSNTEYEVGDNQPYS PLDAVDHTLRNQAETRGLPYTMVEIRNDLLRSERQIAVWAALLTQALRAFAKDHNL" gene complement(116999..118369) /locus_tag="MED193_00545" CDS complement(116999..118369) /locus_tag="MED193_00545" /note="COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /codon_start=1 /transl_table=11 /product="putative aminotransferase protein" /db_xref="CDD:10036" /translation="MNKQASNSWEQRDMTNVFHGFTDLGTLNSNGPVVLSHGEGIYVF DVHGKSYMDANSGLWNNVAGFNHQGLIDTICEQARRFPGYHAFFGRIADTTVALSEKL IDVSPFDAGKVYYTNSGSEANDTMVKMLWMLHRRNGQPQRRKIITRLNAYHGVTVASA SMTGKSYNAEFGLPLPGFLHADCPHYWRYGLGGESELEFSQRLARNLEELIIKEGPDT IAGMFAEPVMGAGGVIPPSEGYFEAIRPILRKYSIPFVADEVICGFGRTGAMWGSVKY NMEPDAIIASKCITAGYFPMGAIILGKEFSDELLRVSENAEEFPHGFTAGGNPLGSAV ALKALDVLENEGLLENVNLVSPRFLERLHKLGAHKYAGEARGVGLMGAVELVANKDTK EALPGEMQVSERIANKALEKGLICRPLGASIVLGPPFIITEDQIDEMFDILEETMAEV FADVGL" gene complement(118842..119792) /locus_tag="MED193_00550" CDS complement(118842..119792) /locus_tag="MED193_00550" /note="COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis" /codon_start=1 /transl_table=11 /product="VirB11 protein" /db_xref="CDD:14094" /translation="MERYLEPFRELLLRDDIVEIAINPDGKVWIEAAGDAAMRHEGQI VDRATAFNLAQTIVGDANARVSEKNPLVSGKVEYGGRPLRVQVAVPPAIEQGASITIR LFATAGVTGYTPSYLFGKAVSLDQLRAEKMKGIANQAEENLEAALEALVHQRLNVLIS GGTSTGKTTFARHLLTHVDDGERLITIEDAFELFPSQPNTVALLASRGTGTQRSSNAL LQASLRMRPDRIIVGELRGDEALTYLEAINTGHGGSVSTIHAETAELAIDRLAIMVLQ AGTPLNFAEVRQYIQKSIDVIVQLVRVDGRRGIAEFYLPN" gene complement(119819..121249) /locus_tag="MED193_00555" CDS complement(119819..121249) /locus_tag="MED193_00555" /note="COG2948 Type IV secretory pathway, VirB10 components" /codon_start=1 /transl_table=11 /product="type IV secretion system protein B10, putative" /db_xref="CDD:8701" /translation="MADENTPDLRDRLSTFSQKNKTKRRGGNIGVGALAIALALGGGG AAYLLATNLQEGTTGLETSDVETFQDQRTGNGGRLEFPPDEAEQQVNDALIAVEEALD VPSPVPAAEPSAAVLEEIAKLREALAASQSARNAEIQEAVSDLREAFQVQTDALEASI AAKDTEIENAQRQSEARLAGLQAMLDAERAQREGLEAEMARDGLIADQRLLEERQRQE EEQRQREVEQAAQELLNAQIVSPSVVYADGPRSTSAGGTNPTAALAGADGPTLSENEQ YLRQGARPLDVQEASQMAFPERTLSQGSVIQAALQTAINSDLPGSVVAVVSEPVPAFS GDQILIPRGSRLFGQYRSGIELNQKRILILWTRVLTPDGTSIEIASVGGDQLGRSGLT GIVDTKFAERFGGAALISLIGAAPAVAANSTDNEIASEVLEGVSGDLEDAVGSVIAEQ VSISPTIYIDQGASVTVLVDRDVVIY" gene complement(121252..121983) /locus_tag="MED193_00560" CDS complement(121252..121983) /locus_tag="MED193_00560" /note="COG3504 Type IV secretory pathway, VirB9 components" /codon_start=1 /transl_table=11 /product="conjugal transfer protein, trbG" /db_xref="CDD:15554" /translation="MNTAACLICAAALLSASPAMSETVPRSGPLDNRVRTATYVENQV FVIETDLRHSTTIHFGQGERFDVVIVGDTESFQVDPIPELGNVLTIKPHVQGASTNMT VITNRRTYSFHLREGAIPGRSGMFFEVRFRYPEDERRAAAASTQPKGFEAPRNYSYRV AGEGDFRPTHIYDDGRYTYFTFPENGRQPAVFKADEQGRERTVNWTQQGNTVRVLGVN EFWTLRIGDEAICALRDDSAIYVSN" gene complement(121988..122659) /locus_tag="MED193_00565" CDS complement(121988..122659) /locus_tag="MED193_00565" /note="COG3736 Type IV secretory pathway, component VirB8" /codon_start=1 /transl_table=11 /product="VirB8 type IV secretion protein" /db_xref="CDD:13056" /translation="MKSQTSQDQSDAFAVDFIYGPRRRERFAYFVAAAGVLVGLAGIV AGASLFPLKSIETFVVVVDKETGQMDRVAAVQALSLSESDAIIQANLVAYVDDRETYD LTDGEQRINSVLERSDGDAARTLRDLWTSSNEDYPIAVYGRDAVIEVVIKSVNQIEPG VAQVRFTRTLRRARDTRSVTRSYVATVGYAFEPETRQRLQDVWANPMGFVVTSYRVDA ETLEN" gene complement(122679..123692) /locus_tag="MED193_00570" CDS complement(122679..123692) /locus_tag="MED193_00570" /note="COG3704 Type IV secretory pathway, VirB6 components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:15907" /translation="MGIIRDILDQVDAAVDSVAQEGFISSAAAVGDVITAGAILLLIL LGINVVMQLRPMTFGSAFAFGIKISLVAIFAQSWDNFSVIYGIATQVPDSVGASILAL TGSGDEAGVYESLDNMVARITAYGDTIGDQAGWVFGAVLGAIFFVLSALFAAVTAGII AFAKIVFALMIVIAPFMIITSLFKPTQSLFEAWSRATIGYALMPVAAAGAAGIIVAIA EAIGDASADPVDVETVSLILPFLVILLLSAGIMASVPYIASNLTGVMGIASNAVGLTG LARRGIVNTSDYGTGSATRFATGKSPQELQQAVNSGVVKTGEAIRRTPATALNTVKSF RAP" gene complement(123696..123992) /locus_tag="MED193_00575" CDS complement(123696..123992) /locus_tag="MED193_00575" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MAVAPDAEEFCRVPRPPAGLAETAYLRNGYRAILRILVAERQLE TETCDCPLSDFTWDMALAELPRFQTTDNPRLPFKVLDLYAMADALEAEHAEGCS" gene complement(124112..124852) /locus_tag="MED193_00580" CDS complement(124112..124852) /locus_tag="MED193_00580" /note="COG0840 Methyl-accepting chemotaxis protein" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MITTLGVSSPAKAQGVPTFDGSQLGQLVAQLEHMAEDLNVQLQQ LATMRLELETQLSQLLNLEAQLTSLIEGSGLSGLFASIEEFRALRGKLVAPLNTARAL ADGDFLSGFNPGAELEASVERVLSGSGFTSETLSTLSSSPEPADNRIATSAGASAMLS VAAQESHAEAGQSLERLETMVGLIDDQDGLKAAVDLNTRVTAELGIILTQIWRLEAAQ GVSAGQLGVVDAATLADERRFRSMAVDP" gene complement(124876..125946) /locus_tag="MED193_00585" CDS complement(124876..125946) /locus_tag="MED193_00585" /note="COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:27995" /translation="MHATSGFAQGVPTQDNAAIGQTIARVTALVQDLGTQGDKEAERS SIADVQADQLRTLEAISAAMTGPGFDISALEGNADFGVASVYPNIDTSPMNSRLFGEG RETVEMMIVRVAGEYAGAPGVARAGLSATQWRCLFQALIKQESRFNITAESHVGAYGL TQLMPGTASDLGVNPYDPMDNLRGGARYITTQLNRFGNIPHALAAYNAGPGRVIEYGG VPPFTETQGYVRNISKFYNEYLAVVGGADALGTLSSSDFALAEYANISDAGVYYAASS HATTMQVINRLRAIILQIDAQPNAKAAWELNTYAKAEIARILNLRVRLMAANQQREAT HAQHLVADRLSEREFMQMGVPN" gene complement(126188..128578) /locus_tag="MED193_00590" CDS complement(126188..128578) /locus_tag="MED193_00590" /note="COG3451 Type IV secretory pathway, VirB4 components" /codon_start=1 /transl_table=11 /product="type IV secretion system protein B4, putative" /db_xref="CDD:12779" /translation="MGVTALALDGGTLSGIGPAVREAGGTGFARESYLAEHLPYFALA TDDVMVLREGDLLATLRLDGLNPMTTEDDRLDALKRAVAAIVAQTGNTFGFYIHRVSV PQNLDLKPVEGDTFASQVDARWAAHIKGLRPSKRQMYLSVIRRPNLAARIPFLRALAR KAWVKDRAARVQELNEVMGFFAVALSSANPVRLTKTGGEWLGYLNTLNAGSFSPIAFG QSPLPLSHTISDCRATFDGDVATITCATTGAVKYGALFSIKSYPALTDVTLLDALDLP LDIVLTNSFSPIPNNIMAERIQRIIRQMHASDDAAVSLRDQLALAADDQEAGRIAFGD HHLSIAVYAPDRDTLERAAAQIKRVGQEIMAVIVRENMALKATYFAQSPGNFGYRARK TPISSTNFSDFAALHGSVEGRSNDESPWGQSIAVLPTVGTSGYRFNFHEAGSASKEPT VGHTLVLGRTGTGKTLTTAFLTAQAQRIGARLFFFDKDRGLEMAVRALGGRYNEIRAG VPTGLNPLASEIDERGRAWLSDWLATLLTRSGALSGEQSRHIQGAVTQNADAGAALQR FASFETLFQSLDDDGELQSRVAEWAPGGRFGWVFDEPDRGQRLDLSGDIVGFDMTEIL DMTTERMAVLSYIFRQIERVVEDRRPTIIVLDEAWKLLDDPYFGARLENWLVTLRKMN CVVIMMTQYPSQLRDSRVGKTIVETVPTQILFPNDRATVADYDFLRVNSKEAALLVQP TIGQRIALVRSAGDSVFVDADLCALGDLLPILGGGATGEARVPADWRSNPDFWRPQ" gene complement(128553..128831) /locus_tag="MED193_00595" CDS complement(128553..128831) /locus_tag="MED193_00595" /note="COG3702 Type IV secretory pathway, VirB3 components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:13022" /translation="MAERSPLFLGLARPPKYLGLPVGYLVVLAMGVVLPFIWTKSLIF FLIGIIAYPVLWFVADKEPHFFEVLRISFGTVRPTKNRAHHGGDSFGA" gene complement(128963..129211) /locus_tag="MED193_00600" CDS complement(128963..129211) /locus_tag="MED193_00600" /note="COG3838 Type IV secretory pathway, VirB2 components (pilins)" /codon_start=1 /transl_table=11 /product="conjugal transfer protein, trbC" /db_xref="CDD:13155" /translation="MVATLALLASPAFAQDLSPIQTMLETVEAALTGPIGIAVATLAV IGTGFMCMMGRLNWGWFASVIIGIVLIFSAGTIVDGFT" gene complement(129259..129804) /locus_tag="MED193_00605" CDS complement(129259..129804) /locus_tag="MED193_00605" /note="COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /codon_start=1 /transl_table=11 /product="transglycosylase SLT domain protein" /db_xref="CDD:27995" /translation="MEAQPVAVAPIAPAAGASAQVLSLIRQTASRHQNNRAIAQAGLS TRDWHVLFQAMIEAESSYNPTAISPKGAYGLGQLMPATARELGVDPRDISQNLDGAAR YLLTQLAEFRSVELALAAYNAGPHRVEQYSGVPPFSETRAYIARIHDIRERLSGGTSQ PAPIRVANTAPTRAPVIIELN" gene complement(129896..130210) /locus_tag="MED193_00610" CDS complement(129896..130210) /locus_tag="MED193_00610" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MPIARNQILITLDGVKDLQKREVAFRCRYELVGFTDDGKPRYQC IYLREGEPEAILVSTRITPLGPEARYFNIWPGLFKHHLEFGDGRDLRFGADYNITLEG NG" gene 130343..130921 /locus_tag="MED193_00615" CDS 130343..130921 /locus_tag="MED193_00615" /note="COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKRLILSAIFGVLMTFGAPKKAQAYDIDCAIMLCMAGGFPPSAV CARAYRTMIRRITPWPSRPPFGICTFAAVPIELGGPGGEGEVDTDLPEYEWLNRTHVI WFTGRSYTPRDDPRQWDWSIRSCDRENRTCRYIARVYGSHTRWPSSFVSESGQTILLP VGRGFGNFYSRDIMVEYGDYGGNMGHSDWFSY" gene complement(130939..131250) /locus_tag="MED193_00620" CDS complement(130939..131250) /locus_tag="MED193_00620" /note="COG0685 5,10-methylenetetrahydrofolate reductase" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MATVQKLAFALEVDPIELIEPVLITRGKKSGTADHETSDDQKVS GGSQLLAVPFQEGFEKRQDDLTLVLIDYRWNDGSTVRRWLVDPKKVKQSAIVVKPCIL L" gene 131546..131800 /locus_tag="MED193_00625" CDS 131546..131800 /locus_tag="MED193_00625" /codon_start=1 /transl_table=11 /product="hicA protein" /translation="MNSKHRKTLAVVFADPVSGTVEWSAVERLLVAAGAQVIEGRGSR VRFEKDGEVETFHRPHPAKEAKRYQVRAARAFLERIGVTP" gene 131797..132129 /locus_tag="MED193_00630" CDS 131797..132129 /locus_tag="MED193_00630" /note="COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:23758" /translation="MTNTMTYKGYSARIEYDDEDGIFTGRLAGISDGVGFHADTVEAL RDAFQEAVEDYVETCAKVGKEPQKAFSGQVMFRVDPEVHRKAALAAELSGKSLNQWAE EVLGRAAE" gene 132273..133868 /locus_tag="MED193_00635" CDS 132273..133868 /locus_tag="MED193_00635" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MERVKLDNGNQKRPPLSARAASATGRSALFLAKVAGKAGWAIAK PVGRQTGKLAAKGGKAVKDHAAVKFAEFELRHTKYTPENFFEKGAISLEDLVDALLIE KRGTSARIVTALSGKLAAAGTTASLFSIASILGTASTGTAISSLSGAAFNSAALAWIG GSVVTGGWIVLGVAAAGGAAAYFGSRKLVGKWTGVRRKKKSLDPQEMRFVETCLMLAT AFRERANQNAVLDPLTAETLQQNLKHDLLEQLDVCIAKVSDWPDLPLMRLEDRKVDLV ELLDALPMAHVQNPSIRRKSTAAAPVVTGVVSATILKLMSDTSPSFTEDEELVLQALR RSNNSLADASELELSEYVQSLSVEQISGLKNNVKGIYHELAFQRQENLDGDEYIVELF GDTNHAGADVRIINVETGDVSEVQLKATNYASYVREHNEKYENIDVLVTSEVAGSSPD WSSSEFSNADLTADTSSALQKLGHEADVDIVHSMGVAAMVALATNAKSMLKGDALSTE AKQKIIQDGVVAASVAGMVQLII" gene complement(134001..134159) /locus_tag="MED193_00640" CDS complement(134001..134159) /locus_tag="MED193_00640" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MLVTARSRMAGEISIREFKTVTGIVSFLTDCGFTKISFPVIEGD TVRLPLDT" gene complement(134475..135749) /locus_tag="MED193_00645" CDS complement(134475..135749) /locus_tag="MED193_00645" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MDNRFAYMRKYLGFSQKDASNIFSTRLDTIKKWDSGKLLVPGPV LEELYDYIRFSNDMVVEFCDERQAEDEDEGIDEIYLRTFTVEGLAEQGLPPSLGWQDQ VIGAIIGRLASIHVYGADTLPEHHDPDYHWYEYWGFEPVKKPTEFFTIQDEALFANEL AKAVEGNFWQVDFDPDENYYLIGFRTKSVSKVTRHIWIRAVRAGRGSELVERFAGEPL RYCDSFGEGAPYIEGPNKAKIPVGFASGHDDDTVDPHTLAETLFAALATSYPTEGAMR EACRDRYAALVGADEGYTADFMNDWDVKDTRFVSHNFIAALFFETQKQTGLTLHPEAM VELCSILAKSEPSIRSMDHEVVVIDMGEMVFTITLDLRDVLSQSGDGRDFHTEASKAL DVIQASIGNDGLTRIEPFSTIEIEFTSDDAEG" gene complement(135742..135876) /locus_tag="MED193_00650" CDS complement(135742..135876) /locus_tag="MED193_00650" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MQMALEPLAPSTEDNYASKQPEDWSTGFWFQVQFQQQMEDYRYG " gene 136207..136986 /locus_tag="MED193_00655" CDS 136207..136986 /locus_tag="MED193_00655" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MALCASYRAGRGWLDIQRPSGRFFPLQPHFGVNRIATWAPSSGT TVNTNGMPRTAVGTVATPTLATTKLSTSMRRWRVASAASADAAAEERSAGWGCWRGNA EGLGGFTYVNRLSLVTLQATGMGFFGLYGSTAALTTTLTLSAVVNCIGIGFQRGTHTN WQLVQNDASGAPTLTDLGASFPVASTTSVLTLTLLAAPNSSEIGVRMVEEVSGAVVEF TLDTDIPVATQLLSPRNSMNNGGTAAAVGYDCSGVYVETDY" gene complement(136980..138089) /locus_tag="MED193_00660" CDS complement(136980..138089) /locus_tag="MED193_00660" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSDDFSVRWVRVTGREGTMMPRLTFSGLLVPYLHFTDMTLVWSD PSQIGFQNLFLRDAVIQGAFSTISATRLEKITGVPAQFWRPSLLALESAGLLAVVDDE PQDATAGGVTYRLVDGAKADPAALDEWDHISTRIRVIRDVLVFPETGELMVSTGNPNH PVDRFMAFFLQTDPKKTFDWFSSVLPRVDSAESLKSYLTALGAASPPVGVPEQVTNLD FRITGGRPRVAPVRAVSGIFDTTRTDLQPFLTRVLQENEKGLWFLPPGAMTIPEGAQS IENLHGLPAMLRRRLDQCQSDEVISAARRRAPKAFPQLSALALTDPYCWTIDGTTTSP YVLEVHFSEVRIRIGIPNSTAEAIDAVPASAEAVQ" gene complement(138082..142326) /locus_tag="MED193_00665" CDS complement(138082..142326) /locus_tag="MED193_00665" /note="COG1112 Superfamily I DNA and RNA helicases and helicase subunits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:10834" /translation="MTRPEQKKLIAAVQSLQAWQAHIQDRGSLRLQVSLSCLLRSRYR PFSISVREFQKQVSNGVLLRRDDTAPDEAVDTSAQPTRAHFRLVTNQHAFSVTSALDP IDGMGMLHARDYLWTRKPITFGMAVSAAPIKVAPIITLHLLPWTRLPTDWQDWVRSLE TEGLLVPFNPKTKELDTGSRHVWHSGPFVFEVQLLAAEGEEPANAVVNWVGRRKNGKN LPSRGSKAVLHLDADSLRLETSLPLVLPPTLLGSNVFPRTRSPRHFKSLGLDKARDLR RPEETEIEDLSPLPEDTRFSNDDIAPLMQNGVVALDFATGRNRFSLFARPTVSPLTGR PYLAVVGAKRTPKKTGTGHRNAETATLRNDCLRPVSAFALELKKPALERLWKGAAPPP TPQAVFSDLDHGFNLLNFASEPVDGGGIKLNSTQFYLIVRPEQGQPREPIPGVRVHIA THIQPNDWPLRVCFQADLIPVNRIEPLFPDELLIERSNDSTRRTLDAHYHFSSHFAQL LNIRDAGTFHYSPRPSWRAPVNVLGVQDRTRRVFPNVPERIAQVLGSVRPRVLLRLNA PPGRGLFLDGSAVGLVDDQGNVSPFRIEVISGQHVLLRAVRRPVGPDKEPPIDQYECP FSPGDKAWIFRRHAVDRADLEQQIRDLRAGKYFVASQEVFARVVSQPDALSGAFEPNA PVEQLMARNTRKRACANPLNARQKEAVSKAARTPHAFFIKGPPGTGKTEVIRELVEIL AARGERILLTSAQNKPLADATERCMNSYGVVPTRITGRRPDLNPSEASCLWASLVERL TAAFDKDDGFGDRLDAEEHRLHALWQSRIALGGLDAAARDARIEDLVRQLLSSVNLYV INIDALAGRIGSLRARLERATAGPRPDDEPDGGPIHAGITSVAATQSARNSPTITPDF EAEFDTLIIDEASRVNDSAFVTAALRCRRWILVGDERQLPPFLADTDASFFHALCALY LVEGRMIGALAQKGIQKHQVPTLDAYLTDTATSDTELRDAVERVGNLWLMKDDRRPIQ SDQVQDIAAALLWQGAFAGRTATANPEEEDAQPRQSTIGKKFDKIIQGQARHHAQPRR PSLQAPQTEWQAYQDMLASYFDAVIDGVQNNFDKFFVRSFFERGYATGNTTEDDNGQA EGFRATLVEQFRMVPEIANLVSERVYDGEYVTPETPPVCPLHLPSFPHQVHFVDLSLL GRISPATQIGTSWANPDEAEHVIEIIRKISAELPGGTTVSVMVLSLFAAQTEFIRARA TEVFGSSGAAPALKGISRLDFGNVDAVQGGEADIVVMSFVRVATGGMPEPGMALFLQD MRRLNVAITRARRKIIFVGHGTTIENLSGTAKAADFLAWMASAESGTVRDMPLRLPYE QLVAGRRALRRFAGSDRTLAQDAEADGIPDEEAADE" gene complement(142323..147248) /locus_tag="MED193_00670" CDS complement(142323..147248) /locus_tag="MED193_00670" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MKSDSVTQRELSDRLDRAFSEASGKAPTGPYVFVLQSPALSGKS EAVARYLQRRIQHGPEGRETAGHHWVALRTHHETQRELNLSKARARPTKYVPDFFWFC TGARRHRSFSRDENARIDSPLWDLAEQVADKEVRKKLSPGARAVDFLENIQDRFSLKG LMINAGNAILGTSMEAFAPGMAEAQPFIQRSIDTVAEQMSQVWAETNGEDIRRTLRSI DRALGDAFFDNLRDFSQSISGKPTFLVLDDFDEMSEMAQAIILKNMSTDGFERLIVIL TLQEGTAQANSLAEELGRGDLARNTVLLTLSAPTGVELLSQLQEDFGAAVSRELVDHL SNRSGGSNPVIIREIIQALLGWYGGRPYLVIDGQADERTLTFTSNVTLEDINSEFFSV GSKSSDELSDILGNIWGDAIRRLDDLDQFILAAIAFGGNEVSEDFIVAALQQDTGFTS TAVTEVAHWRERVRDLAARLSFLVSDAENIFRFDGAYTRFAILKVTERIWAPRRAVLL AAAVVDAFRLGHALQQSAAFGSTCAELVLSVADGNQPLCRMRVSGSSLHAFGESSLER VESLRSGLASIVISSLPDDRQTEADISERADKILSAAAEHFYVQSLSGRDRSAQDRLR FLASALRASGYPDFPHARARASVLQLRLALNRRPLTSGGLQNVIKLSEIERKAAREHL DEMKPEENWRLALLAIEMDILHAEAVLGAIKSGQAKSGTSNRDREEARQQVFRSLREA VERLSRDPGTEADRNGEKNRLLDRLLSGEIDKMAYLDLLSEVEKSESTTNFAWPKGAK AEVDFQLVRARERLVFLLEFHASPDDDRSQLEETRAELSRSLEDYVKMGPQPHLQARF AWATRKLGLILRDQACDTQGDLGTASPETINISERAVQFLSISYDQSKAPNVAMELLR AIEFHVGLVGDTRSLTRLRDRLLDLGRELVTAPLASRTIVGVAEIESRICARLGDGAD VSPPSLWAGYVAGDTEALFVETAFTDFARIPSRNDRYWVLSRLFSEPELAETNVLERL LASGRDIGGLSIAAIVDTLDVFEQQRFEAVPDKTPLTDQASSELLRALDQIGPKIQTV APPTRVALDMLRFRVLAQKAIVAISHSNDSASVFEANKSVETLARSIGDLAQALRDEK SAKKLIGYAKQIGDAFLARAASMEDRAFHFALRDAALAWYQLATTTLQTCPDLKISVS ILRSHAGFHRDHGNFSEARLLNNACARLERYRKWGNDLGGTVYAATDAILTASAESQE RGARLLLLAVLKAEIVDPQIIARMPAFEAERRQLRTRLAAVLWQSLRSRQPKQVSASM SLAPPIDAVRKFAEPSSAPDTGERPGRANSLVGDILSFWAAEPPPAPTPGTLVVARIS AVLPNGIELLDLRGQRFRIDDNLLPSSYYQFLKYAVGRDGSDLAASLRKKKLAAMLPI IVLAGDGEAGLGDGVLPATARGLAYLGDLIGCLLPGLSRGLVVGGSNSVVALRLAQPD FEPFRVGGWTLHKQIAAELLCVKRLILAPAPYVPQAPNSMYDRHALLQQELADFARAT WSALSLVSLRQDLSEATFEIAIDAPVSPQTERTTRSLLRKAFPDVHLIRFLGGALEEE AFSDITGDTATDTGQATGETTSPNAQSGAVL" gene 147634..149034 /locus_tag="MED193_00675" CDS 147634..149034 /locus_tag="MED193_00675" /note="COG3505 Type IV secretory pathway, VirD4 components" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:12833" /translation="MEDVHPEPLPYGFSYGPRPRPTYPEDWDPILQSGEGHLMTIAPT GAGKGVSAVIPTLLRYPGQAVVIDPKGENYHVTAAARRAMGQRVVLLDPFDVCGTGET DRLDPLDLMRAGLIPANTAQRTGKGLPADEEKAREFLGDTARQIARALVPDIPQLRDP FWENSARRMVGALLAYIMAESPKALTNFAELVYTLSQSDKDLGLTVKDMARSKHPFVQ SAASGAFPAEPKVRASVVSTALAAVEFLQGKALEVTQKSTFHLSDVLEGEPMTIYMVL PPEKLASQGRLLRLWMTTLISTLSQRRRLPETPTLFLMDEAAQLGRMDEFLSAVTLMR GYGVKVWSFWQDLSQITAHYPSEWRTILNNTHALQMFGLWNTHMRKDAMNITGFDDLW ELRDMDRNEQLLVLSGDDPVITRRANYLDDPAFDGLAAPNPYYRGSEGEAERLRPIVE PRSYARGPSTDGEAPA" gene 149031..149837 /locus_tag="MED193_00680" CDS 149031..149837 /locus_tag="MED193_00680" /note="COG1253 Hemolysins and related proteins containing CBS domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MSLVWDEPEYPTARVVEHVQQSLPVRLIMVPRSQIQTCAMGDTA ADVAKRNIDDFSYVPVADDAGEIVGLYHAAQWFNRAAPDHTIDLGVAPLSDEMFIDVQ ASILDFILGADRAPTLLVRNRDRISGLVCVSDLQKLPVRMALFGLITGLEMAWAQAIE LHWNGGDGWMHHLSSNRQAKLRDRMAYLRRTDAFVDALETTQLSDKFTILLRENLLPG TERQLRGQYDRIEELRNDLAHANGYAETPARARGLSQTARDILRLQDHAL" gene complement(150095..151603) /locus_tag="MED193_00685" CDS complement(150095..151603) /locus_tag="MED193_00685" /note="COG3436 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:3544" /translation="MLEMPQTLPSDPDELSALTAQLRDLDRAQALKIEKLEHQLAGHR KARFGSKSESLDQLAFDLHEDADIAAAAATQQEEDGQDGEGKRRHSRAPLPDHLERQS EVLSPGETCADCGGTLRALGEDVTQELEYIPGRFVVREIVRPRMACNCCEAFAQVPLP SRPIERGRAGPGLLAHVLVGKYCDHLPLYRQSEIYAREKVDLHRSTLTDWVGRSTALL APLADYIGKQVRAGPALFADDTPVKMQIGGKTGKAQTARMWSYVRDERPWCGQAPPCA WYQFSVDRKGKHPAAHLAAYKGTVHADGFTGFNGLFGEGLASEQACMVHVRRKFVDVF ERNGSTIAKETIERISRLYAVEKDARYKPPEERVALRQTKAKPIFDDLETWLKSQLPK ISGKTKLAEAIRYALSRMPKARAYLENGQLELDNNICERSIRPLTLGRKNYLFMGSEG GGKAAAIAYTLIETARMNRVDPEAWLTWVLTHIADHKINRIDELAPWNWQPS" gene complement(151642..152013) /locus_tag="MED193_00690" CDS complement(151642..152013) /locus_tag="MED193_00690" /note="COG3436 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="70 kDa peroxisomal membrane protein" /db_xref="CDD:23941" /translation="MIPVPSNTRVWLAAGVTDMRRGFNTLAAQTEKVLAEDPYSGHLF VFRGRRGDLLKIIWWDVQGACLFSKRLERGRFVWPAAKEGKISLSPSQLSMLLEGIDW RMPQKTWRPLTTGNLPENPAP" gene 151696..152028 /locus_tag="MED193_00695" CDS 151696..152028 /locus_tag="MED193_00695" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MRHAPVNPLQEHRQLRRAEADFALLGGRPDEAPAFQAFREQTGA LHVPPDDFQQVSPAPAEHEQVARIRILRQHLFRLRGERVEAAPHVRDPGSQPDPRVAG HRDQVISP" gene complement(152010..152417) /locus_tag="MED193_00700" CDS complement(152010..152417) /locus_tag="MED193_00700" /note="COG2963 Transposase and inactivated derivatives" /codon_start=1 /transl_table=11 /product="hypothetical protein" /db_xref="CDD:23225" /translation="MAGKKGQKKRFWSDEEKRSICNQTQVPGVSVAQVARRYSMNSNL IFTWLRDPRYAPGPKEESCGPDGGDVFLPVEVSGPTLEDRTDAARVETVGLYNGTVLA NRIDITLSDGRRIVVEGPTALSAVVRLVQGLIT" gene 152694..154046 /locus_tag="MED193_00705" CDS 152694..154046 /locus_tag="MED193_00705" /codon_start=1 /transl_table=11 /product="hypothetical protein" /translation="MASKTTLNAKNLAALGAERLADLLLEVTKGNAGAKRRLRLELAK EAGSGNVAREIRKRLSTIARSRSFVDWQGRNAFAADLDMQRRAIVSQVGPVDPTGAFD LIWRFVALANGVYERCDDSTGKVQSIFYEACEDLIDLAEVAAPDPLVLADQLLEALAD DDYGHYPTLISGLASVLGSEGLQHLKAGITTSGIDLSNNYALRMALEQIADVEGDVDA YIDQQSDLARKAPQVAAEIARRLLEAGRVEDARGAINAPDGKDRGWIPYEWEAIRISV MRAMGEPEAARDFMWACYARSLNQDHLRAWLGGLPDFEDVEAETRAMEHALGFESFTT ALHFLMTWPEIEQAAVLITNRASEIDGHHYELLGPASDALEDRHPLAATLLKRGLIDF ALQNSRVKRYRHAARHLRECKNLAVRIDDFAQFETHEAYLDGLKQSHGKKTSFWGAVV " gene complement(154151..154594) /locus_tag="MED193_00710" CDS complement(154151..154594) /locus_tag="MED193_00710" /note="COG1846 Transcriptional regulators" /codon_start=1 /transl_table=11 /product="transcriptional regulatory protein" /db_xref="CDD:15281" /translation="MNVYYMPGHLIRRLNQMSTQVFSHHVQVAGYDLTPVQFAAMDAV RANPGLDQAGIAALIAYDRATIGGVIDRLEQKGLVTRSISKRDRRAREVALSDMGHKV YQDVLPTIVRVQGEILEGLTDDEQKQFLRLAEKALRSASNSYSKT" gene complement(154713..155318) /locus_tag="MED193_00715" CDS complement(154713..155318) /locus_tag="MED193_00715" /note="COG1961 Site-specific recombinases, DNA invertase Pin homologs" /codon_start=1 /transl_table=11 /product="DNA integration/recombination/invertion protein" /db_xref="CDD:11669" /translation="MGQRAAIYARVSTSDQSCERQLRELTEFAERGGYEVMGVFKETA SGTKSNRAERSKIMELAQARKIDAVLVTELSRWGRSTQDLLDTLNKLSGWKVSVVAMS GMTFELDTPHGRMMATMLAGIAQFERDLISERVKSGLAAARARGKKLGRQPGQRPKSD KLAPDVLAAVEEGRSYRWIARDLGVSKNTVLSIVKRHRENA" gene 155412..158300 /locus_tag="MED193_00720" CDS 155412..158300 /locus_tag="MED193_00720" /note="COG4644 Transposase and inactivated derivatives, TnpA family" /codon_start=1 /transl_table=11 /product="Transposase" /db_xref="CDD:6485" /translation="MPRRNILTERQRAALFDLASDEPSLLRHYTLSDEDLEHINLRRR PENRLGFALQLCALRYPGRALTPGELIPHDVLAFIGAQLGLTGEALLSYAARRQTRQE HMEALRNLYGYRAFSGRGARDLKAWLDEEAEISISNEDIARRFVDECRRAQTILPAIT TVERLCADALVAAERRIETRIAQRLSDDLCGQLDALLSERIDDRLTRFVWLRQFEVGN NSAGANRLLDRLGFLQDIELPPDLIDGVPDHRVTRLRRQGERYFADGLRDLPGDRRLA ILAVCALEWRAAISDAIVETHDRIVGKTWREGQRLCAARVENARSAVQQTVRFFRDLG AALLEAKEDGASLEKAVEGSLGWDRLPDLVAIAARLSDTLSSDPVAHVVQGHNRFRRY FPRMLRLLNMEGAKVASPLIEATALIQSGAKHDQPRDFLRRTSKWHRHLDSQETGDKR LWEVAACFHLRDAFRSGDVWLKKSRRYGDLKQVLVPATVAAENGRLAVPLDPEAWLAD RHAQMEIGLQQLSKAAKNGAIPGGVIKDGVLSLSRLPTKTPSDAADLLFDLYKRVPET RITDIMLEVDEATGFTDAFTHLRTGAPPKDKIGLMNVLLAEGLNLGLSKMAEASNSHG FWELMRISRWHIESEAYGRALASVVDGQGNLPMARFWGMGLTASSDGQFFPTTRQGEA MNLINAKYGNEPGLKVYTHVSDQFAPFASQTIPATVSEAPYILDGLLNNDVGKRIKEQ YADTGGFTDHVFAVTSILGHRFIPRIRDLPSKRFYVLDPGGTPPNLKGMVGGKIREEL IASNWPDILRIAATMTAGTIAPSQILRKLASYPRQNDLAVALREVGRVERTLFMMDWV LNTDMQRRVQIGLNKGEAHHALKNALRIGRQGEIRDRTAEGQHYRMAALNLLAAIVIY